Query psy7389
Match_columns 731
No_of_seqs 378 out of 2219
Neff 8.4
Searched_HMMs 29240
Date Fri Aug 16 16:58:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7389.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7389hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fim_B ARYL-alcohol oxidase; A 100.0 2.5E-84 8.7E-89 739.5 42.0 521 117-726 2-565 (566)
2 3qvp_A Glucose oxidase; oxidor 100.0 7.7E-81 2.6E-85 711.5 34.2 514 116-730 18-582 (583)
3 3q9t_A Choline dehydrogenase a 100.0 5.6E-80 1.9E-84 705.2 37.7 517 116-728 5-574 (577)
4 3t37_A Probable dehydrogenase; 100.0 1.2E-74 4.1E-79 662.1 45.5 493 115-725 15-522 (526)
5 1gpe_A Protein (glucose oxidas 100.0 5.7E-76 2E-80 677.2 29.8 528 116-729 23-585 (587)
6 2jbv_A Choline oxidase; alcoho 100.0 1.1E-73 3.6E-78 653.9 42.7 501 116-730 12-533 (546)
7 1ju2_A HydroxynitrIle lyase; f 100.0 1E-64 3.5E-69 578.3 26.7 473 113-726 22-516 (536)
8 1kdg_A CDH, cellobiose dehydro 100.0 7.8E-61 2.7E-65 549.5 32.2 495 116-729 6-545 (546)
9 1n4w_A CHOD, cholesterol oxida 100.0 1.7E-56 5.9E-61 507.6 34.0 447 116-729 4-502 (504)
10 1coy_A Cholesterol oxidase; ox 100.0 2.5E-55 8.6E-60 498.2 31.4 445 114-727 8-505 (507)
11 3pl8_A Pyranose 2-oxidase; sub 100.0 9.7E-45 3.3E-49 419.5 35.5 486 113-729 42-615 (623)
12 4at0_A 3-ketosteroid-delta4-5a 99.5 2.8E-13 9.5E-18 153.4 20.8 68 308-382 203-271 (510)
13 1y0p_A Fumarate reductase flav 99.3 5.4E-11 1.8E-15 136.5 18.8 62 310-379 258-320 (571)
14 1qo8_A Flavocytochrome C3 fuma 99.3 4.1E-11 1.4E-15 137.3 17.8 63 311-381 254-317 (566)
15 3dme_A Conserved exported prot 99.3 3.8E-12 1.3E-16 137.2 6.6 65 312-387 155-220 (369)
16 3nyc_A D-arginine dehydrogenas 99.2 1.9E-11 6.5E-16 132.4 9.5 193 116-387 8-219 (381)
17 2gag_B Heterotetrameric sarcos 99.2 2.1E-11 7.2E-16 133.4 9.3 35 116-151 20-56 (405)
18 1y56_B Sarcosine oxidase; dehy 99.2 3.1E-11 1.1E-15 131.0 9.9 36 115-151 3-38 (382)
19 2wdq_A Succinate dehydrogenase 99.2 5.6E-10 1.9E-14 128.1 18.4 57 313-377 149-207 (588)
20 2h88_A Succinate dehydrogenase 99.1 1.2E-09 4.2E-14 125.6 20.2 56 313-377 161-218 (621)
21 2oln_A NIKD protein; flavoprot 99.1 8.2E-10 2.8E-14 120.6 17.0 35 116-151 3-37 (397)
22 1d4d_A Flavocytochrome C fumar 99.1 9.3E-10 3.2E-14 126.1 17.7 64 311-382 259-324 (572)
23 2bs2_A Quinol-fumarate reducta 99.1 8.2E-10 2.8E-14 127.9 17.0 56 313-377 164-221 (660)
24 1chu_A Protein (L-aspartate ox 99.1 1.1E-09 3.6E-14 124.6 17.6 59 313-377 144-209 (540)
25 3da1_A Glycerol-3-phosphate de 99.1 6.4E-10 2.2E-14 127.1 15.3 65 313-387 176-242 (561)
26 3dje_A Fructosyl amine: oxygen 99.1 4E-10 1.4E-14 124.8 12.5 36 115-151 4-40 (438)
27 1pj5_A N,N-dimethylglycine oxi 99.1 2.4E-10 8.1E-15 137.0 10.1 194 116-386 3-216 (830)
28 2gf3_A MSOX, monomeric sarcosi 99.0 8.9E-10 3E-14 119.7 12.9 34 117-151 3-36 (389)
29 2rgh_A Alpha-glycerophosphate 99.0 3.6E-10 1.2E-14 129.3 10.2 59 320-387 200-260 (571)
30 3axb_A Putative oxidoreductase 99.0 2.3E-10 7.7E-15 127.2 7.9 34 116-150 22-56 (448)
31 3gyx_A Adenylylsulfate reducta 99.0 8.1E-10 2.8E-14 127.9 11.9 50 322-377 182-234 (662)
32 1ryi_A Glycine oxidase; flavop 99.0 2.9E-10 9.9E-15 123.3 7.4 38 113-151 13-50 (382)
33 3ps9_A TRNA 5-methylaminomethy 99.0 9.6E-10 3.3E-14 128.7 12.1 35 116-151 271-305 (676)
34 1jnr_A Adenylylsulfate reducta 99.0 3.6E-09 1.2E-13 122.7 16.6 60 311-377 155-219 (643)
35 1kf6_A Fumarate reductase flav 99.0 1.4E-08 4.7E-13 116.8 20.7 57 313-378 140-199 (602)
36 3pvc_A TRNA 5-methylaminomethy 98.9 8E-10 2.7E-14 129.6 8.4 35 116-151 263-297 (689)
37 3v76_A Flavoprotein; structura 98.9 1.1E-09 3.8E-14 120.3 8.7 36 115-151 25-60 (417)
38 2uzz_A N-methyl-L-tryptophan o 98.9 1.3E-09 4.5E-14 117.7 9.2 34 117-151 2-35 (372)
39 2i0z_A NAD(FAD)-utilizing dehy 98.9 3.3E-09 1.1E-13 117.8 12.6 34 117-151 26-59 (447)
40 2qcu_A Aerobic glycerol-3-phos 98.9 5.7E-09 2E-13 117.7 12.9 59 313-382 155-215 (501)
41 3oz2_A Digeranylgeranylglycero 98.8 1E-08 3.4E-13 111.2 10.8 60 309-378 104-163 (397)
42 3nlc_A Uncharacterized protein 98.8 7.3E-09 2.5E-13 117.1 9.6 35 116-151 106-140 (549)
43 2gqf_A Hypothetical protein HI 98.8 1.4E-08 4.8E-13 111.0 10.8 35 116-151 3-37 (401)
44 1rp0_A ARA6, thiazole biosynth 98.8 1.4E-08 4.9E-13 105.5 9.9 36 116-151 38-73 (284)
45 4dgk_A Phytoene dehydrogenase; 98.8 1.4E-08 4.8E-13 114.3 10.0 62 309-382 223-284 (501)
46 2e5v_A L-aspartate oxidase; ar 98.8 6E-08 2E-12 108.4 14.6 31 119-150 1-31 (472)
47 3jsk_A Cypbp37 protein; octame 98.7 1.6E-07 5.6E-12 99.2 16.5 36 116-151 78-114 (344)
48 3cgv_A Geranylgeranyl reductas 98.7 3.9E-08 1.3E-12 106.9 11.9 69 309-388 104-172 (397)
49 3ka7_A Oxidoreductase; structu 98.7 2E-08 6.9E-13 110.4 8.0 60 310-382 199-258 (425)
50 3i3l_A Alkylhalidase CMLS; fla 98.6 2.3E-07 7.9E-12 106.2 12.9 57 309-374 130-186 (591)
51 3atr_A Conserved archaeal prot 98.6 5.6E-08 1.9E-12 108.1 7.1 58 311-377 104-163 (453)
52 3e1t_A Halogenase; flavoprotei 98.5 3.1E-07 1E-11 103.8 11.8 59 309-376 113-172 (512)
53 3c4n_A Uncharacterized protein 98.5 1.3E-07 4.3E-12 103.6 7.7 35 117-151 36-71 (405)
54 2gjc_A Thiazole biosynthetic e 98.5 2.2E-07 7.6E-12 97.6 8.9 36 116-151 64-100 (326)
55 3nix_A Flavoprotein/dehydrogen 98.5 7.4E-07 2.5E-11 97.7 13.4 34 117-151 5-38 (421)
56 3ces_A MNMG, tRNA uridine 5-ca 98.5 1.7E-07 5.9E-12 106.9 8.1 35 116-151 27-61 (651)
57 2zxi_A TRNA uridine 5-carboxym 98.5 1.6E-07 5.4E-12 106.8 7.5 35 116-151 26-60 (637)
58 3cty_A Thioredoxin reductase; 98.4 1E-06 3.6E-11 92.7 12.3 59 320-386 202-262 (319)
59 2qa1_A PGAE, polyketide oxygen 98.4 2E-06 6.8E-11 96.7 15.2 39 112-151 6-44 (500)
60 3cp8_A TRNA uridine 5-carboxym 98.4 3.4E-07 1.2E-11 104.4 8.4 37 114-151 18-54 (641)
61 2gmh_A Electron transfer flavo 98.4 8.1E-07 2.8E-11 101.8 11.1 72 308-387 145-230 (584)
62 2cul_A Glucose-inhibited divis 98.4 7.5E-07 2.6E-11 89.5 9.4 34 117-151 3-36 (232)
63 3ihg_A RDME; flavoenzyme, anth 98.3 5.5E-06 1.9E-10 93.9 16.7 35 116-151 4-38 (535)
64 2qa2_A CABE, polyketide oxygen 98.3 3.3E-06 1.1E-10 94.9 13.5 36 115-151 10-45 (499)
65 1mo9_A ORF3; nucleotide bindin 98.3 3E-06 1E-10 95.8 12.4 69 311-387 259-328 (523)
66 3kkj_A Amine oxidase, flavin-c 98.3 4.8E-07 1.6E-11 91.5 5.0 34 117-151 2-35 (336)
67 4a9w_A Monooxygenase; baeyer-v 98.3 1.8E-06 6.2E-11 91.8 9.5 34 117-151 3-36 (357)
68 3qj4_A Renalase; FAD/NAD(P)-bi 98.3 8.7E-07 3E-11 94.4 6.9 33 118-151 2-37 (342)
69 3lxd_A FAD-dependent pyridine 98.3 1.3E-06 4.5E-11 95.8 8.3 67 310-388 197-263 (415)
70 2bry_A NEDD9 interacting prote 98.2 4.2E-07 1.4E-11 102.2 4.3 35 116-151 91-125 (497)
71 3fmw_A Oxygenase; mithramycin, 98.2 5.1E-06 1.7E-10 94.8 12.8 35 116-151 48-82 (570)
72 2dkh_A 3-hydroxybenzoate hydro 98.2 1.2E-05 4.1E-10 93.2 14.9 37 114-151 29-66 (639)
73 1w4x_A Phenylacetone monooxyge 98.2 5.5E-06 1.9E-10 94.1 11.2 36 115-151 14-49 (542)
74 3gwf_A Cyclohexanone monooxyge 98.2 3.6E-06 1.2E-10 95.4 9.4 35 116-151 7-42 (540)
75 4ap3_A Steroid monooxygenase; 98.1 5E-06 1.7E-10 94.4 9.9 35 116-151 20-54 (549)
76 3s5w_A L-ornithine 5-monooxyge 98.1 1.3E-05 4.3E-10 89.1 12.2 35 116-151 29-68 (463)
77 4fk1_A Putative thioredoxin re 98.1 1.7E-06 5.6E-11 90.6 4.6 36 115-151 4-39 (304)
78 3fg2_P Putative rubredoxin red 98.1 9.2E-06 3.2E-10 88.6 10.2 67 310-388 187-253 (404)
79 4gcm_A TRXR, thioredoxin reduc 98.1 2.2E-06 7.4E-11 90.0 4.7 34 117-151 6-39 (312)
80 3lzw_A Ferredoxin--NADP reduct 98.1 1.6E-05 5.4E-10 83.7 11.4 34 117-151 7-40 (332)
81 3d1c_A Flavin-containing putat 98.1 3.2E-06 1.1E-10 90.7 6.1 34 117-151 4-38 (369)
82 4a5l_A Thioredoxin reductase; 98.0 2.3E-06 8E-11 89.6 4.3 37 114-151 1-37 (314)
83 3uox_A Otemo; baeyer-villiger 98.0 1E-05 3.5E-10 91.7 9.3 35 116-151 8-42 (545)
84 2bcg_G Secretory pathway GDP d 98.0 4E-06 1.4E-10 93.1 5.6 40 113-153 7-46 (453)
85 4gde_A UDP-galactopyranose mut 98.0 4E-06 1.4E-10 94.3 4.7 38 117-154 10-47 (513)
86 2xve_A Flavin-containing monoo 98.0 2.3E-05 8E-10 87.1 10.8 68 311-386 105-176 (464)
87 3fpz_A Thiazole biosynthetic e 97.9 5.5E-06 1.9E-10 87.6 5.1 36 116-151 64-100 (326)
88 1c0p_A D-amino acid oxidase; a 97.9 6.8E-06 2.3E-10 88.2 5.4 37 114-151 3-39 (363)
89 3rp8_A Flavoprotein monooxygen 97.9 7.9E-06 2.7E-10 89.1 5.3 39 112-151 18-56 (407)
90 3p1w_A Rabgdi protein; GDI RAB 97.8 9.9E-06 3.4E-10 89.6 5.1 41 112-153 15-55 (475)
91 3h28_A Sulfide-quinone reducta 97.8 0.00011 3.8E-09 80.7 13.5 35 118-153 3-39 (430)
92 1hyu_A AHPF, alkyl hydroperoxi 97.8 5.3E-05 1.8E-09 85.5 10.3 34 115-149 210-243 (521)
93 3k7m_X 6-hydroxy-L-nicotine ox 97.8 1.2E-05 4.1E-10 88.3 4.7 35 118-153 2-36 (431)
94 3o0h_A Glutathione reductase; 97.7 1.5E-05 5.2E-10 89.1 4.8 34 116-150 25-58 (484)
95 1v0j_A UDP-galactopyranose mut 97.7 1.9E-05 6.4E-10 86.1 5.4 40 114-153 4-43 (399)
96 1yvv_A Amine oxidase, flavin-c 97.7 1.8E-05 6.2E-10 83.5 4.8 34 117-151 2-35 (336)
97 3g3e_A D-amino-acid oxidase; F 97.7 1.5E-05 5.1E-10 85.0 4.0 32 119-151 2-39 (351)
98 3itj_A Thioredoxin reductase 1 97.7 1.8E-05 6.1E-10 83.4 4.0 37 114-151 19-55 (338)
99 3hdq_A UDP-galactopyranose mut 97.6 3.2E-05 1.1E-09 83.7 5.4 38 115-153 27-64 (397)
100 3c96_A Flavin-containing monoo 97.6 2.7E-05 9.3E-10 85.0 4.7 35 116-151 3-38 (410)
101 1s3e_A Amine oxidase [flavin-c 97.6 3E-05 1E-09 87.5 5.1 37 116-153 3-39 (520)
102 3nrn_A Uncharacterized protein 97.6 3.1E-05 1E-09 84.8 4.9 34 119-153 2-35 (421)
103 1d5t_A Guanine nucleotide diss 97.6 3.8E-05 1.3E-09 84.6 5.7 40 113-153 2-41 (433)
104 3lad_A Dihydrolipoamide dehydr 97.6 3.2E-05 1.1E-09 86.2 4.9 35 116-151 2-36 (476)
105 3ab1_A Ferredoxin--NADP reduct 97.6 3.9E-05 1.3E-09 82.0 5.0 37 114-151 11-47 (360)
106 2xdo_A TETX2 protein; tetracyc 97.6 4.4E-05 1.5E-09 82.9 5.4 35 116-151 25-59 (398)
107 1i8t_A UDP-galactopyranose mut 97.6 4E-05 1.4E-09 82.5 5.0 36 117-153 1-36 (367)
108 3qfa_A Thioredoxin reductase 1 97.6 4E-05 1.4E-09 86.4 5.0 37 114-151 29-65 (519)
109 2jae_A L-amino acid oxidase; o 97.6 5.1E-05 1.8E-09 84.8 5.7 39 114-153 8-46 (489)
110 3l8k_A Dihydrolipoyl dehydroge 97.6 3.8E-05 1.3E-09 85.4 4.6 37 115-152 2-38 (466)
111 2x3n_A Probable FAD-dependent 97.6 4.4E-05 1.5E-09 82.9 4.9 34 117-151 6-39 (399)
112 2b9w_A Putative aminooxidase; 97.6 5.2E-05 1.8E-09 83.0 5.5 37 116-153 5-42 (424)
113 1k0i_A P-hydroxybenzoate hydro 97.6 4.2E-05 1.4E-09 82.8 4.7 34 117-151 2-35 (394)
114 2vvm_A Monoamine oxidase N; FA 97.5 5.7E-05 2E-09 84.5 5.8 37 116-153 38-74 (495)
115 4b1b_A TRXR, thioredoxin reduc 97.5 4.4E-05 1.5E-09 86.3 4.8 35 116-151 41-75 (542)
116 3urh_A Dihydrolipoyl dehydroge 97.5 5.2E-05 1.8E-09 84.9 5.1 35 117-152 25-59 (491)
117 3dk9_A Grase, GR, glutathione 97.5 4.1E-05 1.4E-09 85.4 4.2 36 115-151 18-53 (478)
118 2ivd_A PPO, PPOX, protoporphyr 97.5 5E-05 1.7E-09 84.5 4.9 37 116-153 15-51 (478)
119 3i6d_A Protoporphyrinogen oxid 97.5 3.8E-05 1.3E-09 85.1 3.8 36 117-153 5-46 (470)
120 1sez_A Protoporphyrinogen oxid 97.5 5.4E-05 1.8E-09 84.9 5.1 39 114-153 10-48 (504)
121 3ic9_A Dihydrolipoamide dehydr 97.5 5.6E-05 1.9E-09 84.7 5.0 34 117-151 8-41 (492)
122 1rsg_A FMS1 protein; FAD bindi 97.5 4.7E-05 1.6E-09 85.8 4.4 36 117-153 8-44 (516)
123 2e1m_A L-glutamate oxidase; L- 97.5 7.5E-05 2.6E-09 80.2 5.8 38 115-153 42-80 (376)
124 4dna_A Probable glutathione re 97.5 5.4E-05 1.9E-09 84.1 4.6 33 117-150 5-37 (463)
125 3alj_A 2-methyl-3-hydroxypyrid 97.5 6.7E-05 2.3E-09 80.9 5.2 34 117-151 11-44 (379)
126 2q7v_A Thioredoxin reductase; 97.5 6.5E-05 2.2E-09 79.0 4.9 35 115-150 6-40 (325)
127 2vou_A 2,6-dihydroxypyridine h 97.5 7.1E-05 2.4E-09 81.3 5.2 34 117-151 5-38 (397)
128 3nks_A Protoporphyrinogen oxid 97.5 6.4E-05 2.2E-09 83.6 4.9 35 118-153 3-39 (477)
129 2zbw_A Thioredoxin reductase; 97.5 7.3E-05 2.5E-09 78.9 5.1 35 116-151 4-38 (335)
130 3f8d_A Thioredoxin reductase ( 97.5 7.9E-05 2.7E-09 77.8 5.1 33 117-150 15-47 (323)
131 2ywl_A Thioredoxin reductase r 97.4 8.2E-05 2.8E-09 71.0 4.6 33 118-151 2-34 (180)
132 2yg5_A Putrescine oxidase; oxi 97.4 7.1E-05 2.4E-09 82.7 4.7 36 117-153 5-40 (453)
133 2r9z_A Glutathione amide reduc 97.4 7.5E-05 2.6E-09 83.0 4.9 36 115-151 2-37 (463)
134 4b63_A L-ornithine N5 monooxyg 97.4 0.0016 5.4E-08 72.9 15.8 64 309-374 147-212 (501)
135 3fbs_A Oxidoreductase; structu 97.4 8.2E-05 2.8E-09 76.7 4.7 34 117-151 2-35 (297)
136 1ges_A Glutathione reductase; 97.4 7.4E-05 2.5E-09 82.7 4.6 36 115-151 2-37 (450)
137 3dgh_A TRXR-1, thioredoxin red 97.4 7.8E-05 2.7E-09 83.3 4.7 34 116-150 8-41 (483)
138 1zk7_A HGII, reductase, mercur 97.4 9.4E-05 3.2E-09 82.2 5.3 36 115-151 2-37 (467)
139 2aqj_A Tryptophan halogenase, 97.4 9.3E-05 3.2E-09 83.9 5.2 35 116-151 4-41 (538)
140 1ojt_A Surface protein; redox- 97.4 8.4E-05 2.9E-09 83.0 4.6 38 114-152 3-40 (482)
141 3ihm_A Styrene monooxygenase A 97.4 8E-05 2.7E-09 81.9 4.3 34 117-151 22-55 (430)
142 3dgz_A Thioredoxin reductase 2 97.4 8.5E-05 2.9E-09 83.1 4.5 35 116-151 5-39 (488)
143 2a87_A TRXR, TR, thioredoxin r 97.4 7.6E-05 2.6E-09 78.9 3.9 36 114-150 11-46 (335)
144 2r0c_A REBC; flavin adenine di 97.4 9.7E-05 3.3E-09 83.9 4.7 35 116-151 25-59 (549)
145 1v59_A Dihydrolipoamide dehydr 97.4 8.1E-05 2.8E-09 83.0 4.0 36 115-151 3-38 (478)
146 2hqm_A GR, grase, glutathione 97.4 9.8E-05 3.3E-09 82.4 4.6 35 116-151 10-44 (479)
147 3lov_A Protoporphyrinogen oxid 97.3 0.00012 4.3E-09 81.3 5.1 36 117-153 4-41 (475)
148 2e4g_A Tryptophan halogenase; 97.3 0.00014 4.9E-09 82.5 5.3 35 116-151 24-61 (550)
149 2wpf_A Trypanothione reductase 97.3 0.00013 4.4E-09 81.8 4.6 35 114-149 4-39 (495)
150 2weu_A Tryptophan 5-halogenase 97.3 0.00011 3.7E-09 82.7 3.8 34 117-151 2-38 (511)
151 1trb_A Thioredoxin reductase; 97.3 0.0001 3.5E-09 77.1 3.3 33 117-150 5-37 (320)
152 3g5s_A Methylenetetrahydrofola 97.3 0.00016 5.4E-09 77.0 4.7 34 118-152 2-35 (443)
153 2q0l_A TRXR, thioredoxin reduc 97.3 0.00014 4.8E-09 75.8 4.4 32 118-150 2-34 (311)
154 2iid_A L-amino-acid oxidase; f 97.3 0.00018 6.1E-09 80.5 5.5 37 116-153 32-68 (498)
155 2qae_A Lipoamide, dihydrolipoy 97.3 0.00016 5.5E-09 80.3 4.9 34 117-151 2-35 (468)
156 1onf_A GR, grase, glutathione 97.3 0.00017 6E-09 80.8 5.0 34 117-151 2-35 (500)
157 2yqu_A 2-oxoglutarate dehydrog 97.2 0.00017 5.7E-09 79.9 4.7 34 117-151 1-34 (455)
158 2bi7_A UDP-galactopyranose mut 97.2 0.0002 7E-09 77.4 5.3 36 117-153 3-38 (384)
159 1fl2_A Alkyl hydroperoxide red 97.2 0.00016 5.5E-09 75.3 4.4 32 117-149 1-32 (310)
160 2gv8_A Monooxygenase; FMO, FAD 97.2 0.00021 7.3E-09 78.8 5.6 35 116-151 5-41 (447)
161 1dxl_A Dihydrolipoamide dehydr 97.2 0.00018 6.2E-09 79.9 5.0 35 116-151 5-39 (470)
162 3hyw_A Sulfide-quinone reducta 97.2 0.0019 6.5E-08 70.8 13.2 64 309-387 202-266 (430)
163 3r9u_A Thioredoxin reductase; 97.2 0.00014 4.8E-09 75.7 3.8 33 117-150 4-37 (315)
164 1zmd_A Dihydrolipoyl dehydroge 97.2 0.00017 5.8E-09 80.3 4.6 35 116-151 5-39 (474)
165 4dsg_A UDP-galactopyranose mut 97.2 0.00021 7.2E-09 79.8 5.3 37 116-153 8-45 (484)
166 3k30_A Histamine dehydrogenase 97.2 0.00034 1.2E-08 81.7 7.2 39 114-153 388-426 (690)
167 1fec_A Trypanothione reductase 97.2 0.0002 6.8E-09 80.1 4.9 32 117-149 3-35 (490)
168 1vg0_A RAB proteins geranylger 97.2 0.00026 8.8E-09 80.8 5.8 41 113-154 4-44 (650)
169 1ebd_A E3BD, dihydrolipoamide 97.2 0.00019 6.5E-09 79.4 4.6 33 117-150 3-35 (455)
170 3c4a_A Probable tryptophan hyd 97.2 0.00023 7.8E-09 76.8 5.0 33 119-151 2-35 (381)
171 2pyx_A Tryptophan halogenase; 97.2 0.00019 6.5E-09 81.0 4.4 34 117-151 7-52 (526)
172 1lvl_A Dihydrolipoamide dehydr 97.2 0.00022 7.7E-09 79.0 4.7 35 116-151 4-38 (458)
173 2a8x_A Dihydrolipoyl dehydroge 97.2 0.00021 7E-09 79.4 4.4 33 117-150 3-35 (464)
174 4hb9_A Similarities with proba 97.2 0.00026 8.8E-09 76.6 5.0 32 119-151 3-34 (412)
175 1vdc_A NTR, NADPH dependent th 97.2 0.00018 6.3E-09 75.7 3.7 32 117-149 8-39 (333)
176 1b37_A Protein (polyamine oxid 97.1 0.00033 1.1E-08 77.9 4.9 37 116-153 3-40 (472)
177 2eq6_A Pyruvate dehydrogenase 97.1 0.00031 1.1E-08 77.9 4.6 34 117-151 6-39 (464)
178 1pn0_A Phenol 2-monooxygenase; 97.1 0.0003 1E-08 81.6 4.5 34 117-151 8-46 (665)
179 4gut_A Lysine-specific histone 97.1 0.00034 1.1E-08 82.3 4.9 37 116-153 335-371 (776)
180 2vdc_G Glutamate synthase [NAD 97.0 0.00054 1.8E-08 75.8 6.0 36 116-152 121-156 (456)
181 2v3a_A Rubredoxin reductase; a 97.0 0.00042 1.4E-08 74.8 4.9 64 311-387 191-254 (384)
182 1xdi_A RV3303C-LPDA; reductase 97.0 0.00038 1.3E-08 78.0 4.5 35 117-151 2-38 (499)
183 2x8g_A Thioredoxin glutathione 97.0 0.00039 1.3E-08 79.8 4.6 35 115-150 105-139 (598)
184 1q1r_A Putidaredoxin reductase 96.9 0.0006 2.1E-08 74.8 5.1 66 312-387 196-261 (431)
185 1m6i_A Programmed cell death p 96.9 0.00076 2.6E-08 75.4 5.4 64 311-387 230-293 (493)
186 2cdu_A NADPH oxidase; flavoenz 96.8 0.00087 3E-08 74.0 4.9 35 118-152 1-36 (452)
187 3ab1_A Ferredoxin--NADP reduct 96.8 0.012 4.2E-07 62.3 13.7 59 320-386 214-273 (360)
188 3oc4_A Oxidoreductase, pyridin 96.7 0.0011 3.7E-08 73.2 5.0 36 118-153 3-39 (452)
189 2z3y_A Lysine-specific histone 96.7 0.0011 3.8E-08 76.9 5.2 37 116-153 106-142 (662)
190 1xhc_A NADH oxidase /nitrite r 96.7 0.00099 3.4E-08 71.4 4.5 35 117-153 8-42 (367)
191 1trb_A Thioredoxin reductase; 96.7 0.0085 2.9E-07 62.2 11.6 55 320-382 196-253 (320)
192 1o94_A Tmadh, trimethylamine d 96.7 0.0014 4.7E-08 77.0 6.0 38 115-153 387-424 (729)
193 2bc0_A NADH oxidase; flavoprot 96.7 0.00086 2.9E-08 74.9 4.0 35 117-152 35-72 (490)
194 3h8l_A NADH oxidase; membrane 96.7 0.0011 3.6E-08 72.2 4.6 34 119-153 3-39 (409)
195 1ps9_A 2,4-dienoyl-COA reducta 96.7 0.0015 5.1E-08 76.0 6.0 37 116-153 372-408 (671)
196 3kd9_A Coenzyme A disulfide re 96.6 0.0014 4.9E-08 72.2 5.3 37 117-153 3-40 (449)
197 2gag_A Heterotetrameric sarcos 96.6 0.0011 3.9E-08 80.1 4.7 59 320-385 328-392 (965)
198 3sx6_A Sulfide-quinone reducta 96.6 0.0014 4.7E-08 72.1 5.0 36 117-153 4-42 (437)
199 2gqw_A Ferredoxin reductase; f 96.6 0.0014 4.7E-08 71.4 4.8 59 312-387 192-250 (408)
200 1y56_A Hypothetical protein PH 96.6 0.00086 2.9E-08 75.0 3.2 60 315-387 265-324 (493)
201 3f8d_A Thioredoxin reductase ( 96.6 0.019 6.4E-07 59.4 13.3 59 320-387 202-262 (323)
202 3itj_A Thioredoxin reductase 1 96.6 0.013 4.5E-07 61.1 12.2 55 320-382 221-277 (338)
203 3iwa_A FAD-dependent pyridine 96.6 0.0013 4.5E-08 73.0 4.5 64 311-387 206-269 (472)
204 2eq6_A Pyruvate dehydrogenase 96.6 0.0074 2.5E-07 66.8 10.6 33 118-151 170-202 (464)
205 2xag_A Lysine-specific histone 96.5 0.0018 6.3E-08 76.7 5.9 38 115-153 276-313 (852)
206 2q0l_A TRXR, thioredoxin reduc 96.5 0.018 6E-07 59.5 12.9 57 320-384 191-249 (311)
207 3cgb_A Pyridine nucleotide-dis 96.5 0.0016 5.6E-08 72.4 5.1 62 312-387 232-293 (480)
208 2v3a_A Rubredoxin reductase; a 96.5 0.012 4.1E-07 63.2 11.7 33 118-151 146-178 (384)
209 1nhp_A NADH peroxidase; oxidor 96.5 0.0017 5.9E-08 71.5 4.8 36 118-153 1-37 (447)
210 1ebd_A E3BD, dihydrolipoamide 96.5 0.01 3.4E-07 65.4 11.1 33 118-151 171-203 (455)
211 1v59_A Dihydrolipoamide dehydr 96.5 0.011 3.8E-07 65.6 11.4 33 118-151 184-216 (478)
212 3ef6_A Toluene 1,2-dioxygenase 96.5 0.0053 1.8E-07 66.7 8.6 57 320-388 197-253 (410)
213 2zbw_A Thioredoxin reductase; 96.5 0.015 5.1E-07 60.8 11.8 58 320-386 203-262 (335)
214 1vdc_A NTR, NADPH dependent th 96.4 0.02 6.9E-07 59.7 12.5 60 320-386 207-268 (333)
215 1q1r_A Putidaredoxin reductase 96.4 0.0084 2.9E-07 65.6 9.6 33 118-151 150-182 (431)
216 3ics_A Coenzyme A-disulfide re 96.3 0.0026 8.7E-08 72.8 5.3 37 117-153 36-73 (588)
217 2q7v_A Thioredoxin reductase; 96.3 0.022 7.6E-07 59.3 12.1 55 320-383 200-256 (325)
218 1cjc_A Protein (adrenodoxin re 96.3 0.0026 8.8E-08 70.4 5.0 36 117-153 6-43 (460)
219 1fl2_A Alkyl hydroperoxide red 96.3 0.024 8.1E-07 58.5 12.0 54 321-382 193-248 (310)
220 3cgb_A Pyridine nucleotide-dis 96.2 0.0073 2.5E-07 67.1 8.3 34 117-151 186-219 (480)
221 1gte_A Dihydropyrimidine dehyd 96.2 0.0028 9.6E-08 77.2 5.2 37 116-153 186-223 (1025)
222 2hqm_A GR, grase, glutathione 96.1 0.012 4.1E-07 65.3 8.8 33 118-151 186-218 (479)
223 1lqt_A FPRA; NADP+ derivative, 96.0 0.0034 1.2E-07 69.3 4.2 36 117-152 3-44 (456)
224 2a8x_A Dihydrolipoyl dehydroge 96.0 0.017 5.9E-07 63.7 9.8 33 118-151 172-204 (464)
225 3ntd_A FAD-dependent pyridine 96.0 0.0042 1.5E-07 70.5 4.9 36 118-153 2-38 (565)
226 3ef6_A Toluene 1,2-dioxygenase 96.0 0.0046 1.6E-07 67.2 4.9 33 118-151 3-37 (410)
227 3ayj_A Pro-enzyme of L-phenyla 96.0 0.004 1.4E-07 71.9 4.5 36 117-153 56-100 (721)
228 2yqu_A 2-oxoglutarate dehydrog 95.9 0.02 6.8E-07 63.0 9.9 33 118-151 168-200 (455)
229 1zmd_A Dihydrolipoyl dehydroge 95.9 0.026 8.7E-07 62.5 10.7 33 118-151 179-211 (474)
230 2qae_A Lipoamide, dihydrolipoy 95.8 0.029 9.8E-07 62.0 10.6 33 118-151 175-207 (468)
231 3vrd_B FCCB subunit, flavocyto 95.8 0.006 2.1E-07 65.9 4.9 60 316-389 211-270 (401)
232 3r9u_A Thioredoxin reductase; 95.8 0.046 1.6E-06 56.2 11.5 56 320-383 195-251 (315)
233 2gqw_A Ferredoxin reductase; f 95.8 0.019 6.6E-07 62.2 8.8 34 117-151 145-178 (408)
234 3ic9_A Dihydrolipoamide dehydr 95.7 0.048 1.6E-06 60.6 12.0 33 118-151 175-207 (492)
235 1hyu_A AHPF, alkyl hydroperoxi 95.7 0.045 1.5E-06 61.4 11.5 54 321-382 404-459 (521)
236 4eqs_A Coenzyme A disulfide re 95.7 0.0072 2.5E-07 66.3 4.7 59 312-387 193-251 (437)
237 1dxl_A Dihydrolipoamide dehydr 95.6 0.018 6.1E-07 63.7 7.8 33 118-151 178-210 (470)
238 3urh_A Dihydrolipoyl dehydroge 95.6 0.043 1.5E-06 60.9 10.9 33 118-151 199-231 (491)
239 2cdu_A NADPH oxidase; flavoenz 95.6 0.032 1.1E-06 61.3 9.7 33 118-151 150-182 (452)
240 3dgz_A Thioredoxin reductase 2 95.6 0.077 2.6E-06 58.8 12.8 31 119-150 187-217 (488)
241 1ojt_A Surface protein; redox- 95.5 0.044 1.5E-06 60.8 10.2 33 118-151 186-218 (482)
242 2r9z_A Glutathione amide reduc 95.5 0.043 1.5E-06 60.5 10.1 32 119-151 168-199 (463)
243 1m6i_A Programmed cell death p 95.4 0.045 1.5E-06 60.9 10.3 33 119-151 182-217 (493)
244 3iwa_A FAD-dependent pyridine 95.4 0.047 1.6E-06 60.3 10.4 34 118-151 160-193 (472)
245 1onf_A GR, grase, glutathione 95.4 0.061 2.1E-06 59.9 11.3 33 118-151 177-209 (500)
246 2a87_A TRXR, TR, thioredoxin r 95.4 0.03 1E-06 58.6 8.4 33 118-151 156-188 (335)
247 4g6h_A Rotenone-insensitive NA 95.3 0.01 3.5E-07 66.3 4.5 35 117-152 42-76 (502)
248 3dgh_A TRXR-1, thioredoxin red 95.3 0.09 3.1E-06 58.2 12.1 59 320-386 239-301 (483)
249 3dk9_A Grase, GR, glutathione 95.3 0.074 2.5E-06 58.8 11.3 32 119-151 189-220 (478)
250 3ntd_A FAD-dependent pyridine 95.3 0.064 2.2E-06 60.6 11.0 32 119-151 153-184 (565)
251 3lad_A Dihydrolipoamide dehydr 95.2 0.067 2.3E-06 59.1 10.8 33 118-151 181-213 (476)
252 3klj_A NAD(FAD)-dependent dehy 95.2 0.015 5.2E-07 62.5 5.3 36 117-153 9-44 (385)
253 3lzw_A Ferredoxin--NADP reduct 95.2 0.082 2.8E-06 54.8 10.7 58 321-387 202-261 (332)
254 3oc4_A Oxidoreductase, pyridin 95.1 0.073 2.5E-06 58.4 10.3 33 118-151 148-180 (452)
255 3s5w_A L-ornithine 5-monooxyge 95.0 0.2 6.9E-06 54.8 13.8 35 117-151 227-262 (463)
256 1xdi_A RV3303C-LPDA; reductase 94.9 0.054 1.9E-06 60.3 9.0 33 118-151 183-215 (499)
257 3ics_A Coenzyme A-disulfide re 94.8 0.068 2.3E-06 60.8 9.7 33 118-151 188-220 (588)
258 4dna_A Probable glutathione re 94.8 0.1 3.6E-06 57.3 10.8 33 118-151 171-203 (463)
259 3qfa_A Thioredoxin reductase 1 94.7 0.092 3.1E-06 58.8 10.0 31 119-150 212-242 (519)
260 3o0h_A Glutathione reductase; 94.5 0.074 2.5E-06 58.9 8.6 33 118-151 192-224 (484)
261 2wpf_A Trypanothione reductase 94.4 0.1 3.5E-06 58.0 9.5 33 119-151 193-227 (495)
262 1fec_A Trypanothione reductase 94.4 0.097 3.3E-06 58.1 9.2 34 118-151 188-223 (490)
263 2gag_A Heterotetrameric sarcos 93.7 0.15 5.2E-06 61.5 9.6 32 119-151 286-317 (965)
264 3fwz_A Inner membrane protein 93.1 0.11 3.7E-06 46.9 5.6 32 119-151 9-40 (140)
265 1gte_A Dihydropyrimidine dehyd 93.0 0.5 1.7E-05 57.4 12.7 32 119-151 334-366 (1025)
266 4g6h_A Rotenone-insensitive NA 92.9 0.3 1E-05 54.3 9.9 33 119-151 219-264 (502)
267 3llv_A Exopolyphosphatase-rela 92.6 0.098 3.4E-06 47.1 4.5 32 119-151 8-39 (141)
268 1nhp_A NADH peroxidase; oxidor 92.5 0.096 3.3E-06 57.3 5.1 35 116-151 148-182 (447)
269 3k30_A Histamine dehydrogenase 92.4 0.31 1E-05 56.6 9.5 33 118-151 524-558 (690)
270 1lss_A TRK system potassium up 92.4 0.12 4.1E-06 46.1 4.7 32 119-151 6-37 (140)
271 2g1u_A Hypothetical protein TM 92.2 0.12 4.3E-06 47.4 4.7 33 118-151 20-52 (155)
272 3klj_A NAD(FAD)-dependent dehy 92.1 0.11 3.7E-06 55.8 4.7 33 118-151 147-179 (385)
273 4gcm_A TRXR, thioredoxin reduc 92.1 0.12 4.2E-06 53.2 5.0 32 119-151 147-178 (312)
274 1id1_A Putative potassium chan 91.4 0.16 5.4E-06 46.5 4.5 31 119-150 5-35 (153)
275 3ic5_A Putative saccharopine d 90.9 0.19 6.6E-06 43.1 4.3 32 119-151 7-39 (118)
276 1lvl_A Dihydrolipoamide dehydr 90.9 0.17 5.7E-06 55.6 4.8 33 118-151 172-204 (458)
277 4a5l_A Thioredoxin reductase; 90.6 0.21 7.1E-06 51.3 4.9 33 118-151 153-185 (314)
278 1xhc_A NADH oxidase /nitrite r 90.5 0.19 6.5E-06 53.4 4.6 33 118-151 144-176 (367)
279 2hmt_A YUAA protein; RCK, KTN, 89.6 0.24 8.1E-06 44.3 3.9 32 119-151 8-39 (144)
280 1ges_A Glutathione reductase; 89.3 0.3 1E-05 53.4 5.1 33 118-151 168-200 (450)
281 3ado_A Lambda-crystallin; L-gu 88.7 0.3 1E-05 50.7 4.3 31 119-150 8-38 (319)
282 2bc0_A NADH oxidase; flavoprot 88.4 0.38 1.3E-05 53.2 5.2 33 118-151 195-227 (490)
283 3d1c_A Flavin-containing putat 88.2 0.36 1.2E-05 50.8 4.6 32 119-151 168-199 (369)
284 3i83_A 2-dehydropantoate 2-red 87.8 0.42 1.4E-05 49.7 4.8 32 119-151 4-35 (320)
285 3l4b_C TRKA K+ channel protien 87.7 0.35 1.2E-05 47.1 3.9 31 120-151 3-33 (218)
286 3uox_A Otemo; baeyer-villiger 87.6 0.41 1.4E-05 53.8 4.9 35 118-153 186-220 (545)
287 3gwf_A Cyclohexanone monooxyge 87.6 0.45 1.5E-05 53.4 5.1 35 118-153 179-213 (540)
288 1ps9_A 2,4-dienoyl-COA reducta 87.3 1.8 6.3E-05 49.8 10.3 53 315-381 581-633 (671)
289 3hn2_A 2-dehydropantoate 2-red 87.2 0.43 1.5E-05 49.4 4.4 32 119-151 4-35 (312)
290 4eqs_A Coenzyme A disulfide re 87.2 0.49 1.7E-05 51.5 5.1 33 119-152 149-181 (437)
291 3kd9_A Coenzyme A disulfide re 87.0 0.51 1.7E-05 51.5 5.1 32 119-151 150-181 (449)
292 4ap3_A Steroid monooxygenase; 87.0 0.46 1.6E-05 53.4 4.9 35 118-153 192-226 (549)
293 1f0y_A HCDH, L-3-hydroxyacyl-C 86.7 0.51 1.8E-05 48.5 4.6 31 120-151 18-48 (302)
294 2gv8_A Monooxygenase; FMO, FAD 86.4 0.5 1.7E-05 51.5 4.6 33 118-151 213-246 (447)
295 4e12_A Diketoreductase; oxidor 86.3 0.55 1.9E-05 47.8 4.6 32 119-151 6-37 (283)
296 1zk7_A HGII, reductase, mercur 85.7 0.66 2.3E-05 50.9 5.1 33 118-151 177-209 (467)
297 1ks9_A KPA reductase;, 2-dehyd 85.4 0.7 2.4E-05 46.8 4.9 31 120-151 3-33 (291)
298 3ghy_A Ketopantoate reductase 85.2 0.59 2E-05 48.9 4.3 31 119-150 5-35 (335)
299 3g17_A Similar to 2-dehydropan 85.2 0.5 1.7E-05 48.4 3.6 32 119-151 4-35 (294)
300 2xve_A Flavin-containing monoo 85.2 0.61 2.1E-05 51.2 4.5 33 118-151 198-230 (464)
301 2raf_A Putative dinucleotide-b 85.1 0.79 2.7E-05 44.3 4.8 33 118-151 20-52 (209)
302 3lxd_A FAD-dependent pyridine 84.7 0.82 2.8E-05 49.2 5.2 33 118-151 153-185 (415)
303 2y0c_A BCEC, UDP-glucose dehyd 84.6 0.69 2.4E-05 51.0 4.6 34 117-151 8-41 (478)
304 1jw9_B Molybdopterin biosynthe 84.6 0.73 2.5E-05 46.0 4.4 34 117-151 31-65 (249)
305 3fg2_P Putative rubredoxin red 84.5 0.8 2.8E-05 49.1 5.0 33 118-151 143-175 (404)
306 3dfz_A SIRC, precorrin-2 dehyd 84.3 0.83 2.8E-05 44.7 4.5 32 118-150 32-63 (223)
307 3l8k_A Dihydrolipoyl dehydroge 83.8 0.88 3E-05 49.9 5.1 33 118-151 173-205 (466)
308 2ew2_A 2-dehydropantoate 2-red 83.8 0.84 2.9E-05 46.8 4.6 31 119-150 5-35 (316)
309 2x8g_A Thioredoxin glutathione 83.7 0.77 2.6E-05 52.1 4.7 31 119-150 288-318 (598)
310 3ego_A Probable 2-dehydropanto 83.6 0.89 3E-05 46.9 4.7 31 119-151 4-34 (307)
311 1kyq_A Met8P, siroheme biosynt 83.5 0.71 2.4E-05 46.7 3.7 31 119-150 15-45 (274)
312 3cty_A Thioredoxin reductase; 83.3 0.93 3.2E-05 46.5 4.8 34 118-152 156-189 (319)
313 1lld_A L-lactate dehydrogenase 83.3 0.89 3.1E-05 47.0 4.6 32 119-151 9-42 (319)
314 2dpo_A L-gulonate 3-dehydrogen 83.2 0.85 2.9E-05 47.3 4.4 32 119-151 8-39 (319)
315 3p1w_A Rabgdi protein; GDI RAB 83.2 0.94 3.2E-05 49.8 4.9 58 307-375 256-313 (475)
316 3hwr_A 2-dehydropantoate 2-red 82.9 0.93 3.2E-05 47.0 4.5 30 119-150 21-50 (318)
317 3c85_A Putative glutathione-re 82.6 0.84 2.9E-05 42.9 3.7 33 119-151 41-73 (183)
318 3gg2_A Sugar dehydrogenase, UD 82.0 1 3.5E-05 49.1 4.6 32 119-151 4-35 (450)
319 3k6j_A Protein F01G10.3, confi 81.9 1.1 3.6E-05 49.0 4.6 32 119-151 56-87 (460)
320 3vtf_A UDP-glucose 6-dehydroge 81.8 1 3.4E-05 48.9 4.4 33 118-151 22-54 (444)
321 1mv8_A GMD, GDP-mannose 6-dehy 81.7 1 3.5E-05 48.9 4.5 31 120-151 3-33 (436)
322 1txg_A Glycerol-3-phosphate de 81.5 1.1 3.6E-05 46.6 4.4 29 120-149 3-31 (335)
323 1zcj_A Peroxisomal bifunctiona 81.5 1.1 3.7E-05 49.1 4.6 32 119-151 39-70 (463)
324 4g65_A TRK system potassium up 81.4 0.83 2.8E-05 50.1 3.6 31 120-151 6-36 (461)
325 1mo9_A ORF3; nucleotide bindin 81.3 1.2 4.3E-05 49.5 5.1 33 118-151 215-247 (523)
326 3nrn_A Uncharacterized protein 81.3 0.84 2.9E-05 49.1 3.6 57 310-381 192-248 (421)
327 1zej_A HBD-9, 3-hydroxyacyl-CO 81.3 1.2 4.2E-05 45.5 4.6 33 117-151 12-44 (293)
328 2ewd_A Lactate dehydrogenase,; 81.0 1.4 4.9E-05 45.5 5.1 33 118-151 5-38 (317)
329 1jay_A Coenzyme F420H2:NADP+ o 81.0 1.4 4.7E-05 42.4 4.7 30 120-150 3-33 (212)
330 1z82_A Glycerol-3-phosphate de 80.8 1.3 4.3E-05 46.3 4.6 32 118-150 15-46 (335)
331 4b1b_A TRXR, thioredoxin reduc 80.6 1.2 4E-05 50.0 4.5 31 119-150 225-255 (542)
332 3oj0_A Glutr, glutamyl-tRNA re 80.5 0.8 2.7E-05 41.2 2.6 32 119-151 23-54 (144)
333 3l9w_A Glutathione-regulated p 80.3 1.2 4.3E-05 47.9 4.5 32 119-151 6-37 (413)
334 3g79_A NDP-N-acetyl-D-galactos 79.9 1.4 4.9E-05 48.3 4.9 34 119-152 20-54 (478)
335 1bg6_A N-(1-D-carboxylethyl)-L 79.8 1.4 4.8E-05 46.2 4.6 32 119-151 6-37 (359)
336 3k96_A Glycerol-3-phosphate de 79.5 1.4 4.7E-05 46.6 4.4 33 118-151 30-62 (356)
337 3fbs_A Oxidoreductase; structu 79.4 1.5 5E-05 44.2 4.5 32 118-151 142-173 (297)
338 2v6b_A L-LDH, L-lactate dehydr 79.4 1.5 5.2E-05 45.1 4.6 31 120-151 3-35 (304)
339 1pzg_A LDH, lactate dehydrogen 79.3 1.4 4.9E-05 45.9 4.4 32 119-151 11-43 (331)
340 2vns_A Metalloreductase steap3 79.3 1.6 5.4E-05 42.4 4.5 32 119-151 30-61 (215)
341 3dtt_A NADP oxidoreductase; st 79.1 1.7 5.7E-05 43.1 4.7 33 118-151 20-52 (245)
342 1nyt_A Shikimate 5-dehydrogena 79.1 1.6 5.5E-05 44.0 4.6 32 119-151 121-152 (271)
343 4a7p_A UDP-glucose dehydrogena 78.8 1.7 5.9E-05 47.2 5.0 35 117-152 8-42 (446)
344 3doj_A AT3G25530, dehydrogenas 78.6 1.9 6.4E-05 44.4 5.1 32 119-151 23-54 (310)
345 2hjr_A Malate dehydrogenase; m 78.3 1.7 5.8E-05 45.2 4.6 32 119-151 16-48 (328)
346 1evy_A Glycerol-3-phosphate de 78.3 1.2 4.2E-05 47.0 3.6 32 119-151 17-48 (366)
347 1cjc_A Protein (adrenodoxin re 78.3 1.7 5.8E-05 47.5 4.8 53 320-378 269-335 (460)
348 3gpi_A NAD-dependent epimerase 78.2 1.8 6.1E-05 43.6 4.7 31 120-151 6-36 (286)
349 3ius_A Uncharacterized conserv 78.2 1.9 6.4E-05 43.4 4.8 31 120-151 8-38 (286)
350 3ew7_A LMO0794 protein; Q8Y8U8 78.1 2.1 7E-05 41.0 4.9 31 120-151 3-34 (221)
351 3rui_A Ubiquitin-like modifier 77.9 1.9 6.4E-05 45.0 4.7 34 117-151 34-68 (340)
352 3mog_A Probable 3-hydroxybutyr 77.3 1.7 5.7E-05 47.9 4.4 32 119-151 7-38 (483)
353 3pef_A 6-phosphogluconate dehy 77.3 2 6.7E-05 43.6 4.7 31 120-151 4-34 (287)
354 3g0o_A 3-hydroxyisobutyrate de 77.2 1.9 6.6E-05 44.1 4.6 32 119-151 9-40 (303)
355 3h2s_A Putative NADH-flavin re 77.2 2.1 7.1E-05 41.2 4.7 31 120-151 3-34 (224)
356 3c7a_A Octopine dehydrogenase; 77.0 1.6 5.4E-05 46.8 4.1 29 119-148 4-33 (404)
357 2vdc_G Glutamate synthase [NAD 76.9 1.7 5.9E-05 47.4 4.4 33 118-151 265-298 (456)
358 3ond_A Adenosylhomocysteinase; 76.9 1.9 6.5E-05 47.1 4.6 31 119-150 267-297 (488)
359 3h8v_A Ubiquitin-like modifier 76.8 2 6.9E-05 43.8 4.5 34 117-151 36-70 (292)
360 4a9w_A Monooxygenase; baeyer-v 76.8 1.8 6.2E-05 44.7 4.3 32 118-151 164-195 (357)
361 3lk7_A UDP-N-acetylmuramoylala 76.7 2 6.9E-05 46.8 4.8 32 119-151 11-42 (451)
362 3ojo_A CAP5O; rossmann fold, c 76.5 1.7 5.7E-05 47.1 4.0 32 119-151 13-44 (431)
363 3qha_A Putative oxidoreductase 76.5 2 7E-05 43.8 4.6 34 117-151 15-48 (296)
364 1hdo_A Biliverdin IX beta redu 76.5 2.3 7.9E-05 40.1 4.7 31 120-151 6-37 (206)
365 1a5z_A L-lactate dehydrogenase 76.4 1.9 6.7E-05 44.6 4.4 31 120-151 3-35 (319)
366 2a9f_A Putative malic enzyme ( 76.4 2 7E-05 45.4 4.5 34 117-151 188-222 (398)
367 3e8x_A Putative NAD-dependent 76.3 2.3 7.8E-05 41.5 4.7 32 119-151 23-55 (236)
368 3r3s_A Oxidoreductase; structu 76.2 8.3 0.00028 39.0 9.1 30 120-150 52-82 (294)
369 1vl6_A Malate oxidoreductase; 76.1 2.1 7.2E-05 45.3 4.5 34 117-151 192-226 (388)
370 2aef_A Calcium-gated potassium 75.9 1.3 4.5E-05 43.4 2.8 32 118-151 10-41 (234)
371 1zud_1 Adenylyltransferase THI 75.9 2.3 7.8E-05 42.4 4.6 34 117-151 28-62 (251)
372 2pv7_A T-protein [includes: ch 75.9 2.1 7.3E-05 43.7 4.5 32 119-151 23-55 (298)
373 2uyy_A N-PAC protein; long-cha 75.8 2.7 9.2E-05 43.2 5.3 33 118-151 31-63 (316)
374 3pdu_A 3-hydroxyisobutyrate de 75.7 1.9 6.6E-05 43.7 4.1 31 120-151 4-34 (287)
375 2h78_A Hibadh, 3-hydroxyisobut 75.7 2.2 7.4E-05 43.6 4.5 32 119-151 5-36 (302)
376 4dio_A NAD(P) transhydrogenase 75.6 2.4 8.2E-05 45.3 4.9 34 117-151 190-223 (405)
377 1hyh_A L-hicdh, L-2-hydroxyiso 75.4 2.2 7.4E-05 43.9 4.4 31 120-151 4-36 (309)
378 4dll_A 2-hydroxy-3-oxopropiona 75.4 2.2 7.5E-05 44.2 4.5 32 119-151 33-64 (320)
379 1yqg_A Pyrroline-5-carboxylate 75.1 2.3 7.9E-05 42.3 4.4 30 120-150 3-33 (263)
380 4ezb_A Uncharacterized conserv 74.9 2.4 8.3E-05 43.8 4.6 32 119-151 26-58 (317)
381 2eez_A Alanine dehydrogenase; 74.8 2.4 8.3E-05 44.8 4.7 33 118-151 167-199 (369)
382 3p2y_A Alanine dehydrogenase/p 74.7 2.3 7.8E-05 45.1 4.4 34 117-151 184-217 (381)
383 2f1k_A Prephenate dehydrogenas 74.7 2.5 8.5E-05 42.5 4.6 31 120-151 3-33 (279)
384 1yj8_A Glycerol-3-phosphate de 74.7 1.8 6.3E-05 45.8 3.7 32 119-151 23-61 (375)
385 3phh_A Shikimate dehydrogenase 74.6 2.6 8.9E-05 42.4 4.6 33 118-151 119-151 (269)
386 2bcg_G Secretory pathway GDP d 74.6 1.9 6.6E-05 46.9 4.0 58 307-375 242-299 (453)
387 1x0v_A GPD-C, GPDH-C, glycerol 74.3 1.8 6.2E-05 45.3 3.6 32 119-151 10-48 (354)
388 1t2d_A LDH-P, L-lactate dehydr 74.1 2.8 9.6E-05 43.4 4.9 32 119-151 6-38 (322)
389 1p77_A Shikimate 5-dehydrogena 74.0 2 6.9E-05 43.3 3.7 32 119-151 121-152 (272)
390 3tl2_A Malate dehydrogenase; c 73.9 2.7 9.1E-05 43.5 4.6 31 119-150 10-41 (315)
391 4e21_A 6-phosphogluconate dehy 73.8 2.6 9E-05 44.4 4.6 37 114-151 19-55 (358)
392 3dqp_A Oxidoreductase YLBE; al 73.7 2.8 9.5E-05 40.3 4.5 31 120-151 3-34 (219)
393 1o94_A Tmadh, trimethylamine d 73.5 2.2 7.6E-05 49.6 4.4 33 118-151 529-563 (729)
394 3r6d_A NAD-dependent epimerase 73.5 3 0.0001 40.1 4.7 31 120-151 8-40 (221)
395 1lu9_A Methylene tetrahydromet 73.5 2.8 9.5E-05 42.5 4.6 31 119-150 121-152 (287)
396 2dkn_A 3-alpha-hydroxysteroid 73.4 3.2 0.00011 40.7 4.9 31 120-151 4-35 (255)
397 3qsg_A NAD-binding phosphogluc 73.3 2.6 8.9E-05 43.4 4.4 31 119-150 26-57 (312)
398 1w4x_A Phenylacetone monooxyge 73.3 2.7 9.2E-05 47.0 4.9 35 118-153 187-221 (542)
399 2pzm_A Putative nucleotide sug 73.2 3.8 0.00013 42.2 5.7 32 119-151 22-54 (330)
400 1pjc_A Protein (L-alanine dehy 73.1 2.8 9.7E-05 44.1 4.7 33 118-151 168-200 (361)
401 2egg_A AROE, shikimate 5-dehyd 73.0 2.9 9.8E-05 42.8 4.6 32 119-151 143-175 (297)
402 2wtb_A MFP2, fatty acid multif 72.8 2.4 8.2E-05 49.2 4.4 32 119-151 314-345 (725)
403 2x5o_A UDP-N-acetylmuramoylala 72.8 2 6.8E-05 46.7 3.5 31 120-151 8-38 (439)
404 1nvt_A Shikimate 5'-dehydrogen 72.8 2.6 8.9E-05 42.8 4.2 30 119-150 130-159 (287)
405 1guz_A Malate dehydrogenase; o 72.7 3.2 0.00011 42.7 4.9 32 120-151 3-35 (310)
406 1vpd_A Tartronate semialdehyde 72.6 2.9 9.8E-05 42.5 4.5 32 119-151 7-38 (299)
407 3cky_A 2-hydroxymethyl glutara 72.6 2.9 9.8E-05 42.6 4.5 32 118-150 5-36 (301)
408 3c24_A Putative oxidoreductase 72.6 2.9 0.0001 42.3 4.6 32 119-151 13-45 (286)
409 4huj_A Uncharacterized protein 72.5 1.7 5.7E-05 42.3 2.6 32 119-151 25-57 (220)
410 3h5n_A MCCB protein; ubiquitin 72.5 3 0.0001 43.9 4.6 34 117-151 118-152 (353)
411 2g5c_A Prephenate dehydrogenas 72.2 3.1 0.0001 41.9 4.6 30 120-150 4-35 (281)
412 3ggo_A Prephenate dehydrogenas 72.2 3 0.0001 43.0 4.6 32 119-151 35-68 (314)
413 1ur5_A Malate dehydrogenase; o 72.0 3.1 0.00011 42.8 4.6 32 119-151 4-36 (309)
414 1o5i_A 3-oxoacyl-(acyl carrier 71.9 4 0.00014 40.2 5.3 30 120-150 22-52 (249)
415 3o38_A Short chain dehydrogena 71.9 2.5 8.5E-05 42.1 3.8 31 120-151 25-57 (266)
416 1x13_A NAD(P) transhydrogenase 71.7 3.1 0.00011 44.6 4.6 33 118-151 173-205 (401)
417 4gsl_A Ubiquitin-like modifier 71.7 3.1 0.00011 46.7 4.7 34 117-151 326-360 (615)
418 2gf2_A Hibadh, 3-hydroxyisobut 71.6 3.1 0.00011 42.2 4.5 31 120-151 3-33 (296)
419 1leh_A Leucine dehydrogenase; 71.5 3.2 0.00011 43.7 4.6 32 118-150 174-205 (364)
420 3tnl_A Shikimate dehydrogenase 71.4 3.4 0.00012 42.6 4.7 32 118-150 155-187 (315)
421 3vh1_A Ubiquitin-like modifier 71.1 3.3 0.00011 46.4 4.7 34 117-151 327-361 (598)
422 2vhw_A Alanine dehydrogenase; 71.0 3.4 0.00012 43.9 4.7 32 118-150 169-200 (377)
423 3jyo_A Quinate/shikimate dehyd 71.0 3.5 0.00012 41.9 4.6 33 118-151 128-161 (283)
424 3l6d_A Putative oxidoreductase 70.9 3.2 0.00011 42.6 4.4 33 118-151 10-42 (306)
425 3zwc_A Peroxisomal bifunctiona 70.3 3.2 0.00011 48.1 4.6 32 119-151 318-349 (742)
426 2hk9_A Shikimate dehydrogenase 70.3 3.5 0.00012 41.6 4.4 32 119-151 131-162 (275)
427 3vps_A TUNA, NAD-dependent epi 70.2 3.5 0.00012 41.9 4.6 31 120-151 10-41 (321)
428 1i36_A Conserved hypothetical 70.0 3.1 0.00011 41.4 4.0 29 120-149 3-31 (264)
429 1pgj_A 6PGDH, 6-PGDH, 6-phosph 69.8 3.3 0.00011 45.5 4.5 32 119-151 3-34 (478)
430 3dfu_A Uncharacterized protein 69.7 1.6 5.6E-05 42.9 1.7 30 119-149 8-37 (232)
431 2o3j_A UDP-glucose 6-dehydroge 69.7 3.4 0.00012 45.5 4.5 33 119-151 11-44 (481)
432 1dlj_A UDP-glucose dehydrogena 69.5 3.4 0.00012 44.2 4.4 30 120-151 3-32 (402)
433 2zyd_A 6-phosphogluconate dehy 69.5 3.4 0.00012 45.4 4.5 34 117-151 15-48 (480)
434 3dhn_A NAD-dependent epimerase 69.5 3.4 0.00012 39.8 4.0 32 119-151 6-38 (227)
435 3qvo_A NMRA family protein; st 69.1 3.6 0.00012 40.1 4.2 31 120-151 26-58 (236)
436 3d4o_A Dipicolinate synthase s 68.9 4.2 0.00014 41.4 4.7 33 118-151 156-188 (293)
437 2rcy_A Pyrroline carboxylate r 68.9 3.5 0.00012 40.9 4.1 32 119-151 6-41 (262)
438 1wdk_A Fatty oxidation complex 68.8 2.8 9.6E-05 48.6 3.8 32 119-151 316-347 (715)
439 1l7d_A Nicotinamide nucleotide 68.8 4.2 0.00014 43.2 4.9 34 117-151 172-205 (384)
440 1cyd_A Carbonyl reductase; sho 68.8 4.2 0.00014 39.6 4.6 30 120-150 10-40 (244)
441 4b4o_A Epimerase family protei 68.7 4.5 0.00015 40.9 4.9 31 120-151 3-34 (298)
442 3pqe_A L-LDH, L-lactate dehydr 68.6 3.9 0.00013 42.4 4.4 31 119-150 7-39 (326)
443 3u62_A Shikimate dehydrogenase 68.5 4.1 0.00014 40.6 4.5 32 119-151 110-142 (253)
444 1k0i_A P-hydroxybenzoate hydro 68.5 8.7 0.0003 40.4 7.4 57 313-378 109-165 (394)
445 4id9_A Short-chain dehydrogena 68.4 4.1 0.00014 42.1 4.7 32 119-151 21-53 (347)
446 2pgd_A 6-phosphogluconate dehy 68.4 4 0.00014 44.9 4.7 32 119-151 4-35 (482)
447 3ko8_A NAD-dependent epimerase 68.3 4.4 0.00015 41.1 4.8 31 120-151 3-34 (312)
448 2pd4_A Enoyl-[acyl-carrier-pro 68.3 4.6 0.00016 40.5 4.8 31 120-151 9-42 (275)
449 1y8q_A Ubiquitin-like 1 activa 68.3 3.8 0.00013 42.9 4.4 34 117-151 36-70 (346)
450 2rir_A Dipicolinate synthase, 68.2 4.4 0.00015 41.4 4.7 33 118-151 158-190 (300)
451 1pjq_A CYSG, siroheme synthase 68.1 4 0.00014 44.5 4.6 31 119-150 14-44 (457)
452 3pid_A UDP-glucose 6-dehydroge 68.0 4.1 0.00014 44.0 4.6 31 119-151 38-68 (432)
453 3d1l_A Putative NADP oxidoredu 68.0 3.8 0.00013 40.8 4.2 31 119-150 12-43 (266)
454 3ktd_A Prephenate dehydrogenas 68.0 4 0.00014 42.7 4.4 32 119-151 10-41 (341)
455 3pwz_A Shikimate dehydrogenase 68.0 4.5 0.00015 40.8 4.6 33 118-151 121-154 (272)
456 2bka_A CC3, TAT-interacting pr 67.9 4.7 0.00016 39.2 4.7 31 120-151 21-54 (242)
457 2qyt_A 2-dehydropantoate 2-red 67.9 3 0.0001 42.7 3.4 31 119-149 10-45 (317)
458 1lqt_A FPRA; NADP+ derivative, 67.9 4.3 0.00015 44.3 4.8 49 321-378 265-328 (456)
459 3fbt_A Chorismate mutase and s 67.9 4.4 0.00015 41.1 4.5 33 118-151 123-156 (282)
460 2z1m_A GDP-D-mannose dehydrata 67.8 4.5 0.00015 41.6 4.8 31 120-151 6-37 (345)
461 3don_A Shikimate dehydrogenase 67.8 3.5 0.00012 41.7 3.8 33 118-151 118-151 (277)
462 1ff9_A Saccharopine reductase; 67.6 4.1 0.00014 44.3 4.6 30 120-150 6-35 (450)
463 1oju_A MDH, malate dehydrogena 67.6 4.2 0.00014 41.5 4.4 31 120-151 3-35 (294)
464 2p4q_A 6-phosphogluconate dehy 67.5 4.4 0.00015 44.7 4.9 34 117-151 10-43 (497)
465 2ywl_A Thioredoxin reductase r 67.5 4.6 0.00016 37.3 4.4 59 311-386 60-118 (180)
466 2i6t_A Ubiquitin-conjugating e 67.3 4.2 0.00014 41.7 4.4 33 118-151 15-49 (303)
467 3o8q_A Shikimate 5-dehydrogena 67.2 4.8 0.00017 40.7 4.7 33 118-151 127-160 (281)
468 2ydy_A Methionine adenosyltran 67.2 4.4 0.00015 41.3 4.5 31 120-151 5-36 (315)
469 3gvi_A Malate dehydrogenase; N 67.1 4.6 0.00016 41.8 4.6 32 119-151 9-41 (324)
470 3d3w_A L-xylulose reductase; u 67.0 4.8 0.00017 39.2 4.6 30 120-150 10-40 (244)
471 1uay_A Type II 3-hydroxyacyl-C 66.9 5 0.00017 38.9 4.7 31 120-151 5-36 (242)
472 3oig_A Enoyl-[acyl-carrier-pro 66.8 5.1 0.00017 39.8 4.8 30 120-150 10-42 (266)
473 3t4e_A Quinate/shikimate dehyd 66.8 4.9 0.00017 41.4 4.7 32 118-150 149-181 (312)
474 3ldh_A Lactate dehydrogenase; 66.7 4.4 0.00015 42.0 4.3 31 119-150 23-55 (330)
475 2wyu_A Enoyl-[acyl carrier pro 66.5 4.6 0.00016 40.1 4.4 30 120-150 11-43 (261)
476 3orf_A Dihydropteridine reduct 66.3 5.5 0.00019 39.3 4.9 31 120-151 25-56 (251)
477 1y6j_A L-lactate dehydrogenase 66.2 4.8 0.00016 41.6 4.5 33 118-151 8-42 (318)
478 2h7i_A Enoyl-[acyl-carrier-pro 66.1 4.5 0.00015 40.4 4.2 31 120-151 10-43 (269)
479 3k31_A Enoyl-(acyl-carrier-pro 65.9 5 0.00017 40.8 4.6 30 120-150 33-65 (296)
480 1tt5_B Ubiquitin-activating en 65.9 4.4 0.00015 43.8 4.3 34 117-151 40-74 (434)
481 1d5t_A Guanine nucleotide diss 65.9 3.2 0.00011 44.9 3.2 56 307-375 234-289 (433)
482 3eag_A UDP-N-acetylmuramate:L- 65.8 5.2 0.00018 41.4 4.8 32 119-151 6-38 (326)
483 4gx0_A TRKA domain protein; me 65.7 4.9 0.00017 45.1 4.9 33 118-151 349-381 (565)
484 2d5c_A AROE, shikimate 5-dehyd 65.5 4.9 0.00017 40.1 4.4 32 119-151 118-149 (263)
485 2q3e_A UDP-glucose 6-dehydroge 65.3 5.3 0.00018 43.7 4.9 33 119-151 7-40 (467)
486 3p7m_A Malate dehydrogenase; p 65.3 5.2 0.00018 41.3 4.6 32 119-151 7-39 (321)
487 1np3_A Ketol-acid reductoisome 65.1 4.8 0.00016 41.9 4.4 31 119-150 18-48 (338)
488 3guy_A Short-chain dehydrogena 65.1 5.2 0.00018 38.8 4.4 31 120-151 4-35 (230)
489 3awd_A GOX2181, putative polyo 65.1 5.5 0.00019 39.2 4.7 30 120-150 16-46 (260)
490 1y1p_A ARII, aldehyde reductas 65.0 5.3 0.00018 41.0 4.7 30 120-150 14-44 (342)
491 1edz_A 5,10-methylenetetrahydr 65.0 5.2 0.00018 41.2 4.4 33 117-150 177-210 (320)
492 4aj2_A L-lactate dehydrogenase 64.9 5.4 0.00018 41.4 4.6 32 118-150 20-53 (331)
493 2p5y_A UDP-glucose 4-epimerase 64.8 5.2 0.00018 40.6 4.6 30 120-150 3-33 (311)
494 1qsg_A Enoyl-[acyl-carrier-pro 64.7 4.6 0.00016 40.1 4.0 30 120-150 12-44 (265)
495 3vku_A L-LDH, L-lactate dehydr 64.6 5.2 0.00018 41.5 4.4 31 119-150 11-43 (326)
496 3gem_A Short chain dehydrogena 64.6 4.4 0.00015 40.3 3.8 31 120-151 30-61 (260)
497 1n7h_A GDP-D-mannose-4,6-dehyd 64.4 5.7 0.0002 41.7 4.9 31 120-151 31-62 (381)
498 1dhr_A Dihydropteridine reduct 64.4 6.3 0.00022 38.5 4.9 31 120-151 10-41 (241)
499 3l6e_A Oxidoreductase, short-c 64.4 5.9 0.0002 38.7 4.6 30 120-150 6-36 (235)
500 2iz1_A 6-phosphogluconate dehy 64.3 5 0.00017 44.0 4.5 33 118-151 6-38 (474)
No 1
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=100.00 E-value=2.5e-84 Score=739.46 Aligned_cols=521 Identities=29% Similarity=0.463 Sum_probs=427.7
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCC--CCccCCCCcccccc-CCCCCCCcccCCCccccccCCCCeeE
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE--PFFADVPGLAPLIS-RSNIDWNYMTMPDPHACKARPNGRCY 193 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~--~~~~~~p~~~~~~~-~~~~~w~~~~~~~~~~~~~~~~~~~~ 193 (731)
+|||||||||.+||++|.+|++.+|.+|||||||+.. .+...+|.....+. ++.++|.|.+.||++ ++++.+.
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~~~~~~~~~p~~~~~~~~~~~~~w~~~t~pq~~----~~~r~~~ 77 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSDENVLGAEAPLLAPGLVPNSIFDWNYTTTAQAG----YNGRSIA 77 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCCTTCGGGTSGGGSGGGSSSSTTBCCCBCCCCGG----GTTCCCB
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcccCCCceeCcchHHHhcCCCccccccccccCCC----CCCceEe
Confidence 6999999999999999999999669999999999866 34456676655444 477999999999986 5789999
Q ss_pred eecceeeechhhhhcceeecCCHhhHHHHHHc-CCCCCChhhHHHHHHHhhcCCCcccc-----cCCCCCCCCCCceeee
Q psy7389 194 WARGKVMGGSSTINYMIYARGNAEDYDEWEAM-GNEGWGYDEVLEYFKKSEDNEDKEIY-----HKNPEYHGKGGYQTVE 267 (731)
Q Consensus 194 ~~~g~~lGG~S~~n~~~~~r~~~~d~~~w~~~-g~~~w~~~~l~~~~~~~e~~~~~~~~-----~~~~~~~g~~G~l~~~ 267 (731)
+++|+++||+|.+|+|++.|+.+.||+.|++. |+++|+|+++.|||+++|.+...... ..+..+||..|++.+.
T Consensus 78 ~~rGk~lGGsS~iN~m~~~Rg~~~d~d~W~~~~G~~gWs~~~~~pyf~k~E~~~~~~~~~~~~~~~~~~~hG~~Gp~~v~ 157 (566)
T 3fim_B 78 YPRGRMLGGSSSVHYMVMMRGSTEDFDRYAAVTGDEGWNWDNIQQFVRKNEMVVPPADNHNTSGEFIPAVHGTNGSVSIS 157 (566)
T ss_dssp CCCBCBTTGGGGTSCCBCCCCCHHHHHHHHHHHTCTTSSHHHHHHHHHHHEEECCCTTCCCCTTTSCGGGSCBSSSEEEB
T ss_pred ccCCcEEcCcccccceEEecCCHHHHHHHHhcCCCCCcCHHHHHHHHHHHhccCCccccccccccCCccccCCCCCeeee
Confidence 99999999999999999999999999999998 99999999999999999998654210 1134678889999999
Q ss_pred cCCCCCChHHHHHHHHHHc--CCCC-CCCCCCCCCCc----------cccCCChhhhccHhhHhcCCCeEEEcCcEEEEE
Q psy7389 268 WLPYADKNLPVLIKAWKEK--GYPE-RDLNAENQVGG----------FICGDSTNGAFIRPIRKKRKNLTILTEAHVTRI 334 (731)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~--G~~~-~~~~~~~~~G~----------~r~~~s~~~~~L~~a~~~~~g~~i~~~t~V~~I 334 (731)
...+..+....+.++++++ |++. .+++++...|+ .|+ ++..+||.++.+ ++|++|++++.|+||
T Consensus 158 ~~~~~~~~~~~~~~a~~~~~~G~~~~~d~n~~~~~G~~~~~~~~~~g~R~--sa~~ayL~p~~~-r~NL~Vlt~a~V~rI 234 (566)
T 3fim_B 158 LPGFPTPLDDRVLATTQEQSEEFFFNPDMGTGHPLGISWSIASVGNGQRS--SSSTAYLRPAQS-RPNLSVLINAQVTKL 234 (566)
T ss_dssp SCSSCCTHHHHHHHHHHHTHHHHCBCSCGGGSCCCEEEECCBSEETTEEC--CHHHHTHHHHTT-CTTEEEESSCEEEEE
T ss_pred cCCCCCHHHHHHHHHHHHHhcCCCccCCCCCCCcceEEeeeeecCCCEEc--CHHHHHhhhhcc-CCCeEEECCCEEEEE
Confidence 9888889999999999999 9886 56666554444 466 899999999888 899999999999999
Q ss_pred Eec---CCCCCCCceEEEEEEEEeC-C-EEEEEEeccEEEecccCCCchHHHhhcCCCCcccccccCccceeecC-cccc
Q psy7389 335 IFD---KTPNKHKKLVAKSVEFFYK-K-KLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKTLVDLK-VGHN 408 (731)
Q Consensus 335 ~~~---~~g~~~~~~r~~GV~~~~~-g-~~~~i~A~k~VVLAAGai~Tp~LLl~SGig~~~~l~~~gi~~~~~~p-VG~n 408 (731)
+++ ++.+ +++||++... + +..+|+|+|+||||||+|+||+|||+|||||+++|+++||++++|+| ||+|
T Consensus 235 l~~~~~~g~~-----rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPqlL~lSGIGp~~~L~~~gI~vv~dlPgVG~N 309 (566)
T 3fim_B 235 VNSGTTNGLP-----AFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILLQLSGIGDENDLSSVGIDTIVNNPSVGRN 309 (566)
T ss_dssp ECCEEETTEE-----ECCEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCS
T ss_pred EeecCCCCCC-----EEEEEEEEECCCceEEEEEeeeEEEEecCCcCChHHHHhcCCCChHHHhhcCCCceecCcchhhh
Confidence 997 2113 8999999874 5 77899998899999999999999999999999999999999999999 9999
Q ss_pred ccccccCceEEEEecCC-cchhhh-h--hhHHhHHHHHHcCCCCCCCCCccceeEEEeccCC-----------CCCCCCC
Q psy7389 409 LQDHLTSDGIVIAFPKT-ATDRMY-K--KKVSDAFEYKESRCGPLASTGPLQCGVFAKTKLA-----------DSLDVPD 473 (731)
Q Consensus 409 L~dH~~~~~~~~~~~~~-~~~~~~-~--~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-----------~~~~~p~ 473 (731)
|+||+.+ .+.+..+.+ ....+. . .....+.+|...++||++... .+..+|+++... .....|+
T Consensus 310 LqDH~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~-~~~~~f~~~~~~~~~~~~~~~~~~~~~~pd 387 (566)
T 3fim_B 310 LSDHLLL-PAAFFVNSNQTFDNIFRDSSEFNVDLDQWTNTRTGPLTALI-ANHLAWLRLPSNSSIFQTFPDPAAGPNSAH 387 (566)
T ss_dssp BBCCEEE-CCEEEESCSCSSGGGGTCHHHHHHHHHHHHHHSCSGGGCCS-CSEEEEECCCTTCGGGGTSCCCSSSTTSCS
T ss_pred hhcCccc-eEEEEeCCCcccchhhcChHHHHHHHHHHHhcCCCCcccCh-hhheeeeccccchhhhhhhccccccCCCCC
Confidence 9999998 677777654 222111 1 123456788889999988654 567788876421 1124678
Q ss_pred eeEEecCCcccccccCcccCCCCCCCCCCCCCcEEEEEeecccCCccEEEccCCCCCCCCCeeccCCCCChhHHHHHHhc
Q psy7389 474 IQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPILLKPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVAD 553 (731)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~srg~V~l~~~d~~~~~p~i~~~y~~~~~D~~~~~~~ 553 (731)
+++.+.+..+.. .+........+++...+++|.|||+|+|+++|| .+.|.|+++|+.++.|++.++++
T Consensus 388 ~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~l~~P~SrG~V~L~s~dp-~~~P~i~~~yl~~~~D~~~~~~~ 455 (566)
T 3fim_B 388 WETIFSNQWFHP-----------AIPRPDTGSFMSVTNALISPVARGDIKLATSNP-FDKPLINPQYLSTEFDIFTMIQA 455 (566)
T ss_dssp EEEEEESSCCCT-----------TSCCCSSCCEEEEEEEESSCSCCBEEECSSSCT-TSCCEEECCTTCSHHHHHHHHHH
T ss_pred EEEEecccchhh-----------cccCCCCCCEEEEEEeecCCccceEEEecCCCC-CCCceeccccCCCccHHHHHHHH
Confidence 877664432210 011112235778888899999999999999999 99999999999999999999999
Q ss_pred chHHHHHHHHHhhhhcccCCCCCCccccccccccccccccccccchhhhhhhhhhccccceecccccccCCCCccCCCCc
Q psy7389 554 DLKPWIKAIVKKDIVDMWNSIPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQCGSV 633 (731)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 633 (731)
++.++ ++ +.+++++. +...+ ..|++.
T Consensus 456 -----~~~~~------------------~i-----~~~~~~~~------------~~~~~----------~~P~~~---- 481 (566)
T 3fim_B 456 -----VKSNL------------------RF-----LSGQAWAD------------FVIRP----------FDPRLR---- 481 (566)
T ss_dssp -----HHHHH------------------HH-----HTSGGGTT------------TEEEE----------SSGGGS----
T ss_pred -----HHHHH------------------HH-----HhCcccCC------------ccccc----------cCCCcc----
Confidence 99999 88 76777766 33212 123311
Q ss_pred ccccccccccCCCHHHHHHHHHhhcCcccccccccccCCCCCCCCccCCCCeEeccCCeEEeecCCCCCCCCCCcHHHHH
Q psy7389 634 LTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGVQNLRVVDASIMPKIVRGNTNAPTI 713 (731)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~GTcrMG~~d~~~~VVD~~~rV~g~~nL~V~DaSv~P~~~~~NP~lTi~ 713 (731)
...++++|++|+++...+.+|++||||||++++..+|||++|||||++|||||||||||+.+++||++|+|
T Consensus 482 ---------~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~~~~VVD~~lrV~Gv~~LrVvDaSv~P~~~~~n~~~~~~ 552 (566)
T 3fim_B 482 ---------DPTDDAAIESYIRDNANTIFHPVGTASMSPRGASWGVVDPDLKVKGVDGLRIVDGSILPFAPNAHTQGPIY 552 (566)
T ss_dssp ---------CTTCHHHHHHHHHHHCEECSCCBCTTCBCCTTCSSCSBCTTCBBTTCBSEEECSGGGCCSCCSSCTHHHHH
T ss_pred ---------cccchHHHHHHHhhcccccccccCccccCCcccCCccCCCCCeEccCCCcEEcccccCCCCCCcCcHHHHH
Confidence 24589999999999999999999999999844434999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhh
Q psy7389 714 MIAEKAADMIKED 726 (731)
Q Consensus 714 AlA~r~A~~I~~~ 726 (731)
|||||+||.|+++
T Consensus 553 ~iaekaAd~I~~~ 565 (566)
T 3fim_B 553 LVGKQGADLIKAD 565 (566)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhc
Confidence 9999999999875
No 2
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=100.00 E-value=7.7e-81 Score=711.55 Aligned_cols=514 Identities=27% Similarity=0.340 Sum_probs=393.0
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCCC---CccCCCCccccccCCCCCCCcccCCCccccccCCCCee
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEP---FFADVPGLAPLISRSNIDWNYMTMPDPHACKARPNGRC 192 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~~---~~~~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 192 (731)
.+|||||||||.+||++|.||++.++.+|||||||++.. +....|..+..+.++.++|.|.+.|+. ..++.+
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~~q~-----~~~r~~ 92 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDIFGSSVDHAYETVELA-----TNNQTA 92 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSCCCTTSCHHHHBGGGTTTTTTSTTBCCEECCCCT-----TTSCCC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCcceechhhHHhhcCCcccCCccccccC-----CCCCee
Confidence 479999999999999999999997799999999998432 223344444444567899999999885 367889
Q ss_pred EeecceeeechhhhhcceeecCCHhhHHHHHHcCCC-CCChhhHHHHHHHhhcCCCccc------ccCCCCCCCCCCcee
Q psy7389 193 YWARGKVMGGSSTINYMIYARGNAEDYDEWEAMGNE-GWGYDEVLEYFKKSEDNEDKEI------YHKNPEYHGKGGYQT 265 (731)
Q Consensus 193 ~~~~g~~lGG~S~~n~~~~~r~~~~d~~~w~~~g~~-~w~~~~l~~~~~~~e~~~~~~~------~~~~~~~~g~~G~l~ 265 (731)
.|++|+++||+|.+|+|++.|+.+.||+.|++.|++ +|+|+++.+||+++|.+..+.. ...+..+||..|++.
T Consensus 93 ~~~rGk~LGGsS~iN~m~y~Rg~~~Dyd~W~~~g~~~gW~~~~~lpyf~k~E~~~~~~~~~~~~~~~~~~~~hG~~Gpl~ 172 (583)
T 3qvp_A 93 LIRSGNGLGGSTLVNGGTWTRPHKAQVDSWETVFGNEGWNWDNVAAYSLQAERARAPNAKQIAAGHYFNASCHGVNGTVH 172 (583)
T ss_dssp EECCBCSTTGGGGTSCCBCCCCCHHHHHHHHHTSCCTTCSHHHHHHHHHHHEEECCCCHHHHHHTCCCCGGGSCSSSSEE
T ss_pred eccCceecCCcCcccceEEEeCCHHHHHHHHHhCCCCCCChhHHHHHHHHHHhccCCcchhhcccccCCccccCCCCCEE
Confidence 999999999999999999999999999999999877 9999999999999999864310 002356788999999
Q ss_pred eecC---CCCCChHHHHHHHHHHcCCCC-CCCCCCCCCCc-----------cccCCChhhhccHhhHhcCCCeEEEcCcE
Q psy7389 266 VEWL---PYADKNLPVLIKAWKEKGYPE-RDLNAENQVGG-----------FICGDSTNGAFIRPIRKKRKNLTILTEAH 330 (731)
Q Consensus 266 ~~~~---~~~~~~~~~~~~~~~~~G~~~-~~~~~~~~~G~-----------~r~~~s~~~~~L~~a~~~~~g~~i~~~t~ 330 (731)
+... ....+....+.++++++|++. .++++....|+ .|+ ++..+||.++++ ++|++|++++.
T Consensus 173 v~~~~~~~~~~~~~~~~~~a~~~~G~~~~~D~n~~~~~G~~~~~~t~~~~g~R~--saa~ayL~p~~~-r~NL~V~t~a~ 249 (583)
T 3qvp_A 173 AGPRDTGDDYSPIVKALMSAVEDRGVPTKKDFGCGDPHGVSMFPNTLHEDQVRS--DAAREWLLPNYQ-RPNLQVLTGQY 249 (583)
T ss_dssp EBCCCCSSCBCTHHHHHHHHHHTTTCCBCCCTTSSCCCEEECCCBSBCTTCBBC--CHHHHHTTTTTT-CTTEEEECSCE
T ss_pred ecCCCCcccCCHHHHHHHHHHHHcCCCcCCCCCCCCCceecccceeEcCCCcEe--cHHHHHHHHhhc-CCCcEEEcCCE
Confidence 8876 334677889999999999986 57776554433 466 888999998888 89999999999
Q ss_pred EEEEEecCC--CCCCCceEEEEEEEE-eCCEEEEEEeccEEEecccCCCchHHHhhcCCCCcccccccCccceeecCccc
Q psy7389 331 VTRIIFDKT--PNKHKKLVAKSVEFF-YKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKTLVDLKVGH 407 (731)
Q Consensus 331 V~~I~~~~~--g~~~~~~r~~GV~~~-~~g~~~~i~A~k~VVLAAGai~Tp~LLl~SGig~~~~l~~~gi~~~~~~pVG~ 407 (731)
|+||++++. ++ +++||++. .+|...+|+|+|+||||||+|+||+|||+|||||+++|+++||++++|+|||+
T Consensus 250 V~rIl~d~~~~~~-----ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL~lSGIGp~~~L~~~GI~vv~dLPVG~ 324 (583)
T 3qvp_A 250 VGKVLLSQNGTTP-----RAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYSGIGMKSILEPLGIDTVVDLPVGL 324 (583)
T ss_dssp EEEEEEECSSSSC-----EEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHHHHTTBSCHHHHGGGTCCCSBCCCTTC
T ss_pred EEEEEeccCCCCC-----EEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHHHHcCCCCHHHHHhCCCCceeeCcccc
Confidence 999999842 34 99999998 57888899999899999999999999999999999999999999999999999
Q ss_pred cccccccCceEEEEecCCc-----------chhhhhhhHHhHHHHHHcC----------CCCCCCCCccceeEEEeccC-
Q psy7389 408 NLQDHLTSDGIVIAFPKTA-----------TDRMYKKKVSDAFEYKESR----------CGPLASTGPLQCGVFAKTKL- 465 (731)
Q Consensus 408 nL~dH~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~----------~G~~~~~~~~~~~~~~~~~~- 465 (731)
||+||+.+ .+.+.++... ...+..........|.... .|.+.....+.. .|.....
T Consensus 325 NLqDH~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 402 (583)
T 3qvp_A 325 NLQDQTTA-TVRSRITSAGAGQGQAAWFATFNETFGDYSEKAHELLNTKLEQWAEEAVARGGFHNTTALLI-QYENYRDW 402 (583)
T ss_dssp CBBCCEEE-EEEEEECGGGCSBCEEEEEEEHHHHHGGGHHHHHHHHHHCHHHHHHHHHHTTSCSCHHHHHH-HHHHHHHH
T ss_pred chhhCccc-eEEEEecCCccccccccccccHHHhhccchHHHHHHHHhhcchhhcccccccCccccHHHHh-hhccchhh
Confidence 99999998 6777765420 0011100011111111111 111110000000 0000000
Q ss_pred CCCCCCCCeeEEecCCcccccccCcccCCCCCCCCCCCCCcEEEEEeecccCCccEEEccCCCCCCCCCee-ccCCCCCh
Q psy7389 466 ADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPILLKPKSRGYIQLNATDPLWGPPLI-FPKFFTKK 544 (731)
Q Consensus 466 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~srg~V~l~~~d~~~~~p~i-~~~y~~~~ 544 (731)
......|..+..+. ....+.+.+..++|.|||+|+|+++|| .+.|.| +++|+.++
T Consensus 403 ~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~P~SrG~v~l~s~dp-~~~P~i~~~~yl~~~ 458 (583)
T 3qvp_A 403 IVNHNVAYSELFLD-----------------------TAGVASFDVWDLLPFTRGYVHILDKDP-YLHHFAYDPQYFLNE 458 (583)
T ss_dssp HHHSCCEEEEEEEE-----------------------CTTSEEEEEEESSCCCCBEEEESSSCG-GGCCEEEECCTTCSH
T ss_pred hccCCCCcceeeec-----------------------cCCCceeeeeecccCCceEEEecCCCC-CCCcccccCCCCCCH
Confidence 00000111111110 011233444458899999999999999 999999 99999999
Q ss_pred hHHHHHHhcchHHHHHHHHHhhhhcccCCCCCCccccccccccccccccccccchhhhhhhhhhccccceecccccccCC
Q psy7389 545 PDLDVFVADDLKPWIKAIVKKDIVDMWNSIPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLP 624 (731)
Q Consensus 545 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (731)
.|++.++++ ++.++ ++ +.+++++. +...+ .
T Consensus 459 ~D~~~~~~~-----~~~~~------------------~i-----~~~~~~~~------------~~~~~----------~ 488 (583)
T 3qvp_A 459 LDLLGQAAA-----TQLAR------------------NI-----SNSGAMQT------------YFAGE----------T 488 (583)
T ss_dssp HHHHHHHHH-----HHHHH------------------HH-----HTSTTHHH------------HEEEE----------E
T ss_pred HHHHHHHHH-----HHHHH------------------HH-----HhCcchhh------------ccccc----------c
Confidence 999999999 99999 88 66666665 33212 1
Q ss_pred CCccCCCCcccccccccccCCCHHHHHHHHHhhcCcccccccccccCCCCCCCCccCCCCeEeccCCeEEeecCCCCCCC
Q psy7389 625 PPICQCGSVLTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGVQNLRVVDASIMPKIV 704 (731)
Q Consensus 625 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~GTcrMG~~d~~~~VVD~~~rV~g~~nL~V~DaSv~P~~~ 704 (731)
.|++.. ....++++|++|++....+.+|++||||||++ +.++|||++|||||++||||||+||||+.+
T Consensus 489 ~pg~~~-----------~~~~sd~~~~~~~r~~~~t~~H~~GTc~Mg~~-~~~~VVD~~lrV~Gv~~LrVvDaSv~P~~~ 556 (583)
T 3qvp_A 489 IPGDNL-----------AYDADLSAWTEYIPYHFRPNYHGVGTCSMMPK-EMGGVVDNAARVYGVQGLRVIDGSIPPTQM 556 (583)
T ss_dssp ESGGGS-----------CTTCCHHHHHHHGGGSCEECSCCBCTTCBSCG-GGTCSBCTTCBBTTCBSEEECSTTCCSSCC
T ss_pred CCCccc-----------ccCCCHHHHHHHHHhccCCCcCCCCceeCCCC-CCCceECCCCeEecCCCeEEeecccCCCCC
Confidence 244321 12358999999999999999999999999984 457999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHHHHhhhccC
Q psy7389 705 RGNTNAPTIMIAEKAADMIKEDWILD 730 (731)
Q Consensus 705 ~~NP~lTi~AlA~r~A~~I~~~~~~~ 730 (731)
++||++|+||||||+||.|+++++.+
T Consensus 557 ~~n~~~t~~aiaeraAd~I~~~~~~~ 582 (583)
T 3qvp_A 557 SSHVMTVFYAMALKISDAILEDYASM 582 (583)
T ss_dssp SSCSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcCcHHHHHHHHHHHHHHHHHhhhhc
Confidence 99999999999999999999998753
No 3
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=100.00 E-value=5.6e-80 Score=705.19 Aligned_cols=517 Identities=30% Similarity=0.461 Sum_probs=409.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCC---CCccCCCCccccccCCCCCCCcccCCCccccccCCCCee
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE---PFFADVPGLAPLISRSNIDWNYMTMPDPHACKARPNGRC 192 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~---~~~~~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 192 (731)
.+|||||||||.+||++|.+|+++++.+|||||||+.. .+...+|..+..+.++.++|.|.+.. .++.+
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~~~~~~~~i~~P~~~~~~~~~~~dW~y~t~~--------~~r~~ 76 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIGNPEDIPEITTPSSAMDLRNSKYDWAYKTTM--------VRRDD 76 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCSCGGGCHHHHCGGGGGGGTTSTTBCCEEEEE--------EEETT
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCceEECchhhhhccCCCcccceEEEE--------CCccc
Confidence 47999999999999999999999944899999999863 23346677766677788999998762 23444
Q ss_pred E------eecceeeechhhhhcceeecCCHhhHHHHHHcCCCCCChhhHHHHHHHhhcCCCccc-ccCCCCCCCCCCcee
Q psy7389 193 Y------WARGKVMGGSSTINYMIYARGNAEDYDEWEAMGNEGWGYDEVLEYFKKSEDNEDKEI-YHKNPEYHGKGGYQT 265 (731)
Q Consensus 193 ~------~~~g~~lGG~S~~n~~~~~r~~~~d~~~w~~~g~~~w~~~~l~~~~~~~e~~~~~~~-~~~~~~~~g~~G~l~ 265 (731)
. +++|+++||+|.+|+|++.|+.+.||+.|++.|+++|+|+++.+||++.|.+..... +..+..+||..|++.
T Consensus 77 ~~~~~~~~~rGkvLGGsS~iN~m~~~rg~~~dyd~W~~~G~~gW~~~~~lpyf~k~e~~~~~~~~~~~~~~~hG~~Gpl~ 156 (577)
T 3q9t_A 77 YERIEKPNTRGKTLGGSSSLNYFTWVPGHKATFDQWEEFGGKEWTWDPLVPYLRKSATYHDDPRLYSPELEKIGGGGPIP 156 (577)
T ss_dssp EEEEEEEECCBCSTTGGGGTSCCEECCCCHHHHHTTHHHHCGGGSHHHHHHHHHHTEEEECTTCCSCGGGGGGCCSCSEE
T ss_pred cccccccccccccccCccccCceEeccCCHHHHHHHHHhCCCCCCHHHHHHHHHHHhccCCCccccCCccccCCCCCCEE
Confidence 4 899999999999999999999999999999999999999999999999998765321 001233678899999
Q ss_pred eecCCCCCC---hHHHHHHHHHHcCCCC-CCCCCCCCCCc----------cccCCChhhhccHhhHhcCCCeEEEcCcEE
Q psy7389 266 VEWLPYADK---NLPVLIKAWKEKGYPE-RDLNAENQVGG----------FICGDSTNGAFIRPIRKKRKNLTILTEAHV 331 (731)
Q Consensus 266 ~~~~~~~~~---~~~~~~~~~~~~G~~~-~~~~~~~~~G~----------~r~~~s~~~~~L~~a~~~~~g~~i~~~t~V 331 (731)
+....+... ....+.++++++|++. .++++....|+ .|+ ++. .|+ .. ++|++|++++.|
T Consensus 157 v~~~~~~~~~~~~~~~~~~a~~~~G~~~~~d~n~~~~~G~~~~~~~~~~g~R~--s~~-~~l---~~-r~Nl~v~~~a~v 229 (577)
T 3q9t_A 157 ISHAELIDEMAPFRENLTKAWKSMGQPLIENIYDGEMDGLTHCCDTIYRGQRS--GSF-LFV---KN-KPNITIVPEVHS 229 (577)
T ss_dssp EEECCCCGGGHHHHHHHHHHHHHTTCCBCSCCSSSCCCEEEECEESEETTEEC--CGG-GGS---SS-CTTEEEECSEEE
T ss_pred eeCCCCCcccchHHHHHHHHHHHcCCCcCCCCCCCCcCeEEeecceecCCeEe--eHH-HHH---hc-CCCeEEEcCcEE
Confidence 988765433 5667788889999987 56776655554 344 433 343 34 789999999999
Q ss_pred EEEEecCCCCCCCceEEEEEEEEeC-CEEEEEEeccEEEecccCCCchHHHhhcCCCCcccccccCccceeecC-ccccc
Q psy7389 332 TRIIFDKTPNKHKKLVAKSVEFFYK-KKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKTLVDLK-VGHNL 409 (731)
Q Consensus 332 ~~I~~~~~g~~~~~~r~~GV~~~~~-g~~~~i~A~k~VVLAAGai~Tp~LLl~SGig~~~~l~~~gi~~~~~~p-VG~nL 409 (731)
++|++++.++ +++||++... |...+|+|+|+||||||+|+||+|||+|||||.++|+++||++++|+| ||+||
T Consensus 230 ~ri~~~~~~~-----~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~lL~~SGIGp~~~L~~~GI~vv~dlP~VG~nl 304 (577)
T 3q9t_A 230 KRLIINEADR-----TCKGVTVVTAAGNELNFFADREVILSQGVFETPKLLMLSGIGPTRELSRHGINTIVDSRHVGQNL 304 (577)
T ss_dssp EEEEEETTTT-----EEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHHHHHHTTEECHHHHHTTTCCCSEECTTTTEEE
T ss_pred EEEEEeCCCC-----EEEEEEEEeCCCcEEEEEeeeEEEEcccccCChHHHHHcCCCCHHHHHHcCCCeeccCchhhhhh
Confidence 9999985445 9999999875 888899998899999999999999999999999999999999999999 99999
Q ss_pred cccccCceEEEEecCC--cchhhhh---hhHHhHHHHHHcCCCCCCCCCccceeEEEeccCC------------------
Q psy7389 410 QDHLTSDGIVIAFPKT--ATDRMYK---KKVSDAFEYKESRCGPLASTGPLQCGVFAKTKLA------------------ 466 (731)
Q Consensus 410 ~dH~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~------------------ 466 (731)
+||+.+ .+.+.++.+ ..+.+.. .......+|...++||++. +..+..+|.++...
T Consensus 305 ~DH~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~Gpl~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (577)
T 3q9t_A 305 MDHPGV-PFVLRVKDGFGMDDVLLRHGPKRDAVVSAYNKNRSGPVGS-GLLELVGFPRIDKYLEKDAEYRKAKAANGGKD 382 (577)
T ss_dssp BCCEEE-EEEEEECTTSSSHHHHTSCSHHHHHHHHHHHHHSCSGGGC-CSEEEEEECCCHHHHTTCHHHHHHHHHTTTSC
T ss_pred hcCcce-eEEEEeCCCCccchhhhcchhHHHHHHHHHHhcCCCCccc-chhheeEEeecChhhhcchhhhhhhhcccccc
Confidence 999998 778887764 1122111 1335567788889999874 33566667654210
Q ss_pred --CCCCCCCeeEEecCCcccccccCcccCCCCCCCCCCCCCcEEEEEeecccCCcc-EEEccCCCCCCCCCeeccCCCCC
Q psy7389 467 --DSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPILLKPKSRG-YIQLNATDPLWGPPLIFPKFFTK 543 (731)
Q Consensus 467 --~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~srg-~V~l~~~d~~~~~p~i~~~y~~~ 543 (731)
.+...|++++.+.+.... .+. ..+.......++++...+++|.||| +|+|+++|| .+.|.|+++|+.+
T Consensus 383 ~~~~~~~p~~~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~l~~P~SrGG~V~L~S~dp-~~~P~i~p~yl~~ 453 (577)
T 3q9t_A 383 PFSPLGQPHFELDFVCMFGT-AFQ-------WHFPTPKTGDHLTVVVDLVRPISDPGEVTLNSADP-FQQPNINLNFFAN 453 (577)
T ss_dssp SSCTTSCCSEEEEEESSCCG-GGC-------SSSCCCSSSEEEEEEEEESSCCSCCEEEECSCSCT-TSCCEEECCTTCS
T ss_pred ccCCCCCceEEEEecccccc-ccc-------ccccCCCCCCEEEEEEEeeeccccCCEEEeCCCCC-CCCceEecCcCCC
Confidence 122467888766543111 000 0111112235678888899999999 999999999 9999999999999
Q ss_pred hhHHHHHHhcchHHHHHHHHHhhhhcccCCCCCCcccccccccccc-ccccccccchhhhhhhhhhccccceeccccccc
Q psy7389 544 KPDLDVFVADDLKPWIKAIVKKDIVDMWNSIPPSNKLKRIKPTVDS-WTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKK 622 (731)
Q Consensus 544 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (731)
+.|++.++++ ++.++ ++ + .+++++. +...+
T Consensus 454 ~~D~~~~~~~-----~~~~~------------------~i-----~~~~~~~~~------------~~~~e--------- 484 (577)
T 3q9t_A 454 DLDIIAMREG-----IRFSY------------------DL-----LFKGEGFKD------------LVESE--------- 484 (577)
T ss_dssp HHHHHHHHHH-----HHHHH------------------HH-----HHHSTTGGG------------TEEEE---------
T ss_pred ccHHHHHHHH-----HHHHH------------------HH-----HHhChhhhh------------ccccc---------
Confidence 9999999999 99999 87 6 5666665 32212
Q ss_pred CCCCccCCCCcccccccccccCCCHHHHHHHHHhhcCcccccccccccCCCCCCCCccCCCCeEeccCCeEEeecCCCCC
Q psy7389 623 LPPPICQCGSVLTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGVQNLRVVDASIMPK 702 (731)
Q Consensus 623 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~GTcrMG~~d~~~~VVD~~~rV~g~~nL~V~DaSv~P~ 702 (731)
..|+. ...++++|++|+|+...+.+|++|||+||++ +.+||||++|||||++|||||||||||+
T Consensus 485 -~~p~~--------------~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~-~~~~VVD~~lrV~Gv~~LrVvDaSv~P~ 548 (577)
T 3q9t_A 485 -YPWEM--------------PLDSDKEMHRAVLDRCQTAFHPTGTARLSKN-IDQGVVDPKLKVHGIKKLRVADASVIPI 548 (577)
T ss_dssp -ESSCC--------------CTTCHHHHHHHHHHHCEECSCCBCTTCBCSS-TTTCSBCTTCBBTTCBSEEECSGGGCSS
T ss_pred -cCCCC--------------CcCCHHHHHHHHHhccccccccccceecCCC-CCCceECCCCeEeCCCCcEEeecccccC
Confidence 11221 2458999999999999999999999999984 4489999999999999999999999999
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHhhhc
Q psy7389 703 IVRGNTNAPTIMIAEKAADMIKEDWI 728 (731)
Q Consensus 703 ~~~~NP~lTi~AlA~r~A~~I~~~~~ 728 (731)
.+++||++|+||||||+||.|+++++
T Consensus 549 ~~~~n~~a~~~~iaekaAd~I~~~~~ 574 (577)
T 3q9t_A 549 IPDCRIQNSVYAVGEKCADMIKAEHK 574 (577)
T ss_dssp CCSSCCHHHHHHHHHHHHHHHHHHCT
T ss_pred CCCCccHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999875
No 4
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=100.00 E-value=1.2e-74 Score=662.12 Aligned_cols=493 Identities=30% Similarity=0.441 Sum_probs=384.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCCC-CccCCCCccccccCCCCCCCcccCCCccccccCCCCeeE
Q psy7389 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEP-FFADVPGLAPLISRSNIDWNYMTMPDPHACKARPNGRCY 193 (731)
Q Consensus 115 ~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~~-~~~~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 193 (731)
..+|||||||||++|+++|.||||.+|++|||||||+... +....|..+..+.++.++|.|.+.|+.+ +.++.+.
T Consensus 15 ~~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~~~~~~~~~p~~~~~~~~~~~dw~~~t~p~~~----~~~~~~~ 90 (526)
T 3t37_A 15 APNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEEPTDPDIWNPAAWPALQGRSYDWDYRTEAQAG----TAGRAHH 90 (526)
T ss_dssp --CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBCCCCGGGGSGGGGGGTTTSTTBCCEECCCBGG----GTTBCCE
T ss_pred CCCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCCCCCcchhChhhHhhccCCccccCccccccCC----CCCCeEe
Confidence 3489999999999999999999996589999999998653 3345676667777888999999999886 5688899
Q ss_pred eecceeeechhhhhcceeecCCHhhHHHHHHc-CCCCCChhhHHHHHHHhhcCCCcccccCCCCCCCCCCceeeecCCC-
Q psy7389 194 WARGKVMGGSSTINYMIYARGNAEDYDEWEAM-GNEGWGYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPY- 271 (731)
Q Consensus 194 ~~~g~~lGG~S~~n~~~~~r~~~~d~~~w~~~-g~~~w~~~~l~~~~~~~e~~~~~~~~~~~~~~~g~~G~l~~~~~~~- 271 (731)
+++|++|||+|.+|++++.|+.+.||+.|++. ++.+|+|+++.+||+++|..... ....++..|++.......
T Consensus 91 ~~rG~~lGGsS~in~~~~~R~~~~Dfd~w~~~~~~~~w~~~~~~pyf~~~E~~~~~-----~~~~~~~~g~~~~~~~~~~ 165 (526)
T 3t37_A 91 WARGRLIGGSSCLHAMGYMRGHPSDFQAWVDASGDRRWGWDELLPVFQAIEDHPLG-----GDGIHGKGGPLPIHLPADE 165 (526)
T ss_dssp ECCBCBTTGGGGTSCCBCCCCCHHHHHHHHHHHSCGGGSHHHHHHHHHHHEECTTT-----TSSSSCSSCSEECBCCSTT
T ss_pred ccCccEECcHHHHhhCEEecCCHHHHHHHHHhcCCCCCChhhhhhhhhhhhhccCC-----CccccCcCCCcCccccccc
Confidence 99999999999999999999999999999875 78899999999999999987653 334556677777655433
Q ss_pred CCChHHHHHHHHHHcCCCC-CCCCCCCCCCc----------cccCCChhhhccHhhHhcCCCeEEEcCcEEEEEEecCCC
Q psy7389 272 ADKNLPVLIKAWKEKGYPE-RDLNAENQVGG----------FICGDSTNGAFIRPIRKKRKNLTILTEAHVTRIIFDKTP 340 (731)
Q Consensus 272 ~~~~~~~~~~~~~~~G~~~-~~~~~~~~~G~----------~r~~~s~~~~~L~~a~~~~~g~~i~~~t~V~~I~~~~~g 340 (731)
..+..+.+.++++++|++. .+.+.....++ .|+ +....++.++.+.+.|++|++++.|++|+++.
T Consensus 166 ~~p~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~r~--s~~~~~~~~~~~~r~nl~v~~~~~v~~i~~~~-- 241 (526)
T 3t37_A 166 VSPLARAFIEAGASLGLPRLEGHNSGEMIGVTPNSLNIRDGRRV--TAADAWLTKAVRGRKNLTILTGSRVRRLKLEG-- 241 (526)
T ss_dssp SCHHHHHHHHHHHHTTCCBCSSSCSSCCBSBCCCCBCEETTEEC--CHHHHHSCHHHHTCTTEEEECSCEEEEEEEET--
T ss_pred CCHHHHHHHHHHHHcCCCcccCCCCCcccccccccccccCCccc--ccccccccccccCCCCeEEEeCCEEEEEEecC--
Confidence 3567788899999999976 34443332222 344 77777775554327899999999999999984
Q ss_pred CCCCceEEEEEEEEeCCEEEEEEeccEEEecccCCCchHHHhhcCCCCcccccccCccceeecC-ccccccccccCceEE
Q psy7389 341 NKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKTLVDLK-VGHNLQDHLTSDGIV 419 (731)
Q Consensus 341 ~~~~~~r~~GV~~~~~g~~~~i~A~k~VVLAAGai~Tp~LLl~SGig~~~~l~~~gi~~~~~~p-VG~nL~dH~~~~~~~ 419 (731)
+ +++||++...+....+.|+ +||||||+|+||+|||+||||+...|.+.||+++.|+| ||+||+||+......
T Consensus 242 ~-----~a~gv~~~~~~~~~~~~a~-~VILsAGai~SP~LLl~SGig~~~~l~~~gi~vv~dlp~VG~nl~DH~~~~~~~ 315 (526)
T 3t37_A 242 N-----QVRSLEVVGRQGSAEVFAD-QIVLCAGALESPALLMRSGIGPHDVLDAAGVGCLIDMPDIGRNLQDHLLGAGNL 315 (526)
T ss_dssp T-----EEEEEEEEETTEEEEEEEE-EEEECSHHHHHHHHHHHTTEECHHHHHHHTCCCSEECTTTTCSBBCCEEEEEEE
T ss_pred C-----eEEEEEEEecCceEEEeec-ceEEcccccCCcchhhhccCCchhhhhccCCCeEecCCccccccccccccceeE
Confidence 5 8999999988888899997 89999999999999999999999999999999999999 999999999762222
Q ss_pred EEecCCcchhhhhhhHHhHHHHHHcCCCCCCCCCccceeEEEeccCCCCCCCCCeeEEecCCcccccccCcccCCCCCCC
Q psy7389 420 IAFPKTATDRMYKKKVSDAFEYKESRCGPLASTGPLQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMS 499 (731)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (731)
+....+ .+...........+.+.........|++........+. . ..+.
T Consensus 316 ~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-------~~~~ 364 (526)
T 3t37_A 316 YAARKP---------------------VPPSRLQHSESMAYMRADSFTAAGQPEIVVGCGVAPIV---S-------ESFP 364 (526)
T ss_dssp EEESSC---------------------CCCCSSCSEEEEEEECSSCSSCCSSCCEEEEEESSCCC---C-------TTSC
T ss_pred EeccCC---------------------cchHhhcchhhhhhhhcccccccCCcceeeeccccccc---c-------cccc
Confidence 332222 11111111233344433322222345555543222111 0 1111
Q ss_pred CCCCCCcEEEEEeecccCCccEEEccCCCCCCCCCeeccCCCCChhHHHHHHhcchHHHHHHHHHhhhhcccCCCCCCcc
Q psy7389 500 PFAYYDGITVRPILLKPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAIVKKDIVDMWNSIPPSNK 579 (731)
Q Consensus 500 ~~~~~~~~~~~~~~~~p~srg~V~l~~~d~~~~~p~i~~~y~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (731)
.......+++...+++|.|||+|++.+.|| .+.|.|+++|+.++.|++.++++ ++.++
T Consensus 365 ~~~~~~~~~~~~~l~~p~srG~v~~~s~dp-~~~p~i~~~~~~~~~d~~~~~~~-----~~~~r---------------- 422 (526)
T 3t37_A 365 APAAGSAYSLLFGITHPTSRGSVRISGPEL-GDRLIIDPAYLQTGRDRERFRRA-----LEASR---------------- 422 (526)
T ss_dssp CCCTTSEEEEEEEESSCCCCBEEECSSSST-TSCCEEECCTTCSHHHHHHHHHH-----HHHHH----------------
T ss_pred cccCCcceeeeccccCccccCcceeccCCC-ccCceeccccCCCHHHHHHHHHH-----HHHHH----------------
Confidence 222345677778889999999999999999 99999999999999999999999 89888
Q ss_pred ccccccccccccccccccchhhhhhhhhhccccceecccccccCCCCccCCCCcccccccccccCCCHHHHHHHHHhhcC
Q psy7389 580 LKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQCGSVLTDLNKVFYKFGTWDYWACIAMQFTG 659 (731)
Q Consensus 580 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (731)
++ ..+..+.. +...+ ..|+. ..+++++++|++....
T Consensus 423 --~i-----~~~~~~~~------------~~~~~----------~~pg~---------------~~~~~~~~~~ir~~~~ 458 (526)
T 3t37_A 423 --TI-----GHRDELAG------------WRERE----------LLPGT---------------PNSAAEMDDFIARSVI 458 (526)
T ss_dssp --HH-----HTCGGGTT------------TEEEE----------CSSCC---------------CCSHHHHHHHHHHHEE
T ss_pred --HH-----HcChhhhh------------ccccc----------cCCCC---------------CCCHHHHHHHHHhcCc
Confidence 77 55555655 32212 22332 2468899999999999
Q ss_pred cccccccccccCCCCCCCCccCCCCeEeccCCeEEeecCCCCCCCCCCcHHHHHHHHHHHHHHHHh
Q psy7389 660 TIQHPVGTCKMGPKDDPGSVVDARLRVHGVQNLRVVDASIMPKIVRGNTNAPTIMIAEKAADMIKE 725 (731)
Q Consensus 660 ~~~H~~GTcrMG~~d~~~~VVD~~~rV~g~~nL~V~DaSv~P~~~~~NP~lTi~AlA~r~A~~I~~ 725 (731)
+.+|++||||||+ |+ +||||++|||||++|||||||||||+++++||++||||||||+||+-..
T Consensus 459 t~~H~~GTcrMG~-d~-~sVVD~~~rV~Gv~nL~VvDaSv~P~~~~~np~~ti~aiAEkaAd~~~~ 522 (526)
T 3t37_A 459 THHHPCGTCRMGK-DP-DAVVDANLRLKALDNLFVVDASIMPNLTAGPIHAAVLAIAETFARQYHH 522 (526)
T ss_dssp ECSCCBCTTCBCS-ST-TCSBCTTCBBTTCSSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred cCcccCccccCCC-CC-CccCCCCCEEcCCCCeEEEEcCcccCCcChHHHHHHHHHHHHHHHHhhc
Confidence 9999999999996 54 7999999999999999999999999999999999999999999998643
No 5
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=100.00 E-value=5.7e-76 Score=677.21 Aligned_cols=528 Identities=27% Similarity=0.316 Sum_probs=393.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCCC--CccC-CCCccccccCCCCCCCcccCCCccccccCCCCee
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEP--FFAD-VPGLAPLISRSNIDWNYMTMPDPHACKARPNGRC 192 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~~--~~~~-~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 192 (731)
.+|||||||+|.+|+++|.+|++.+|.+|+|||+|.... .... .|..+..+.+..++|.|.+.| .+.++.+
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~p------~~~~~~~ 96 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQIFGTTVDQNYLTVP------LINNRTN 96 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCCTTSCHHHHCGGGTTTTTTSTTBCCEECCC------CTTSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCccCCCcccccChhhHhhccCCcccccccccc------CCCCcee
Confidence 479999999999999999999993399999999998663 2223 665554445567899998877 2467889
Q ss_pred EeecceeeechhhhhcceeecCCHhhHHHHHHc-CCCCCChhhHHHHHHHhhcCCCcc------cccCCCCCCCCCCcee
Q psy7389 193 YWARGKVMGGSSTINYMIYARGNAEDYDEWEAM-GNEGWGYDEVLEYFKKSEDNEDKE------IYHKNPEYHGKGGYQT 265 (731)
Q Consensus 193 ~~~~g~~lGG~S~~n~~~~~r~~~~d~~~w~~~-g~~~w~~~~l~~~~~~~e~~~~~~------~~~~~~~~~g~~G~l~ 265 (731)
.+.+|++|||+|.+|+|++.|+.+.||+.|++. |.++|+|++++|||+++|+++.+. ....+..+++..|++.
T Consensus 97 ~~~rGk~lGGsS~in~~~~~R~~~~D~d~W~~~~G~~gW~~~~l~pyf~k~E~~~~~~~~~~~~G~~~~~~~~g~~Gpl~ 176 (587)
T 1gpe_A 97 NIKAGKGLGGSTLINGDSWTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNGTVQ 176 (587)
T ss_dssp EECCBCSTTGGGGTSCCEECCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHTEEECCCCHHHHHHTCCCCGGGCCBSSSEE
T ss_pred eeeccccccccccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhcccCCcccccccccccCccccCCCCCEE
Confidence 999999999999999999999999999999998 999999999999999999987642 1001455788889999
Q ss_pred eecC---CCCCChHHHHHHHHHHcCCCC-CCCCCCCCCCc-----------cccCCChhhhccHhhHhcCCCeEEEcCcE
Q psy7389 266 VEWL---PYADKNLPVLIKAWKEKGYPE-RDLNAENQVGG-----------FICGDSTNGAFIRPIRKKRKNLTILTEAH 330 (731)
Q Consensus 266 ~~~~---~~~~~~~~~~~~~~~~~G~~~-~~~~~~~~~G~-----------~r~~~s~~~~~L~~a~~~~~g~~i~~~t~ 330 (731)
+.++ ....+..+.+.++++++|++. .+++++...|+ .|+ ++..+||.++++ +.|++|++++.
T Consensus 177 v~~~~~~~~~~~~~~~~~~a~~~~G~~~~~d~n~~~~~G~~~~~~~~~~~g~R~--sa~~~~l~~~~~-~~nl~i~~~~~ 253 (587)
T 1gpe_A 177 SGARDNGQPWSPIMKALMNTVSALGVPVQQDFLCGHPRGVSMIMNNLDENQVRV--DAARAWLLPNYQ-RSNLEILTGQM 253 (587)
T ss_dssp EBCCCCSSCBCTHHHHHHHHHHHTTCCBSCCTTSSCCCEEECCEESBCTTCCBC--CHHHHHTTTTTT-CTTEEEEESCE
T ss_pred EccCCCcCCCCHHHHHHHHHHHHcCCCcCCCCCCCCCCEEEecceEECCCCccc--CHHHHHHHHhhc-CCCcEEEcCCE
Confidence 8855 345778899999999999987 46665543332 455 888899987777 89999999999
Q ss_pred EEEEEecCCCCCCCceEEEEEEEE-eCCEEEEEEeccEEEecccCCCchHHHhhcCCCCcccccccCccceeecCccccc
Q psy7389 331 VTRIIFDKTPNKHKKLVAKSVEFF-YKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKTLVDLKVGHNL 409 (731)
Q Consensus 331 V~~I~~~~~g~~~~~~r~~GV~~~-~~g~~~~i~A~k~VVLAAGai~Tp~LLl~SGig~~~~l~~~gi~~~~~~pVG~nL 409 (731)
|++|+++++++ ..+++||++. .++...+|+|+|+||||||+|+||+||++|||||.+.|+++||++++|+|||+||
T Consensus 254 v~~l~~~~~~~---~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~lL~~SGIGp~~~L~~~gI~vv~dlPVG~nL 330 (587)
T 1gpe_A 254 VGKVLFKQTAS---GPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEYSGIGLKSVLDQANVTQLLDLPVGINM 330 (587)
T ss_dssp EEEEEEEEETT---EEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHHHTTEECHHHHHHTTCCCSEECCTTCSB
T ss_pred EEEEEECCCCC---CCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHHHHhCCCCCHHHHHhCCCCeEEeCCCCcch
Confidence 99999974220 1189999998 5788889999669999999999999999999999999999999999999999999
Q ss_pred cccccCceEEEEecCCcc--hhhhhhhHHhHHHHHHcCCCCCCCCCccceeEEEeccCCCC--C--C--CCCeeEEecCC
Q psy7389 410 QDHLTSDGIVIAFPKTAT--DRMYKKKVSDAFEYKESRCGPLASTGPLQCGVFAKTKLADS--L--D--VPDIQFHHDPM 481 (731)
Q Consensus 410 ~dH~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~--~--~--~p~~~~~~~~~ 481 (731)
+||+.+ .+.+.++++.. +... ........|...+.|++... ..+...|.+...... . . .|+++..+.+.
T Consensus 331 ~DH~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (587)
T 1gpe_A 331 QDQTTT-TVSSRASSAGAGQGQAV-FFANFTETFGDYAPQARDLL-NTKLDQWAEETVARGGFHNVTALKVQYENYRNWL 407 (587)
T ss_dssp BCCEEE-EEEEEECGGGCSBCEEE-EEEEHHHHHGGGHHHHHHHH-HHSHHHHHHHHHHTTSCSCHHHHHHHHHHHHHHH
T ss_pred hcCccc-ceEEEeCCCcccccchH-HHHHHHHHHHhCCCCCcccc-ccceeeEeecccccccccccccccccHHHHhhhc
Confidence 999998 77777764310 0000 00111223333333332210 011111221110000 0 0 01111100000
Q ss_pred cccccccCcccCCCCCCCCCCCCCcEEEEEeecccCCccEEEccCCCCCCCCC-eeccCCCCChhHHHHHHhcchHHHHH
Q psy7389 482 SVRDWITNPVNASSTNMSPFAYYDGITVRPILLKPKSRGYIQLNATDPLWGPP-LIFPKFFTKKPDLDVFVADDLKPWIK 560 (731)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~srg~V~l~~~d~~~~~p-~i~~~y~~~~~D~~~~~~~~~~~~~~ 560 (731)
....+.. .. ..+ .....+++...+++|.|||+|+|+++|| .+.| .|+++|+.++.|++.++++ ++
T Consensus 408 -~~~~~~~--~~--~~~---~~~~~~~~~~~~~~P~srG~V~L~s~dp-~~~P~~i~~~y~~~~~D~~~~~~~-----~~ 473 (587)
T 1gpe_A 408 -LDEDVAF--AE--LFM---DTEGKINFDLWDLIPFTRGSVHILSSDP-YLWQFANDPKFFLNEFDLLGQAAA-----SK 473 (587)
T ss_dssp -HHSCCEE--EE--EEE---ECTTEEEEEEEESSCCCCBEEEESSSCG-GGTCEEEECCTTSSHHHHHHHHHH-----HH
T ss_pred -cCCCCcc--ee--eee---cCCCcEEEEEEecCCccceeEEeCCCCc-ccCccEeecccCCChHHHHHHHHH-----HH
Confidence 0000000 00 000 0023466777888999999999999999 9999 9999999999999999999 99
Q ss_pred HHHHhhhhcccCCCCCCccccccccccccccccccccchhhhhhhhhhccccceecccccccCCCCccCCCCcccccccc
Q psy7389 561 AIVKKDIVDMWNSIPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQCGSVLTDLNKV 640 (731)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 640 (731)
.++ ++ +.+.++.. +...+ ..|+...
T Consensus 474 ~~~------------------~i-----~~~~~~~~------------~~~~~----------~~pg~~~---------- 498 (587)
T 1gpe_A 474 LAR------------------DL-----TSQGAMKE------------YFAGE----------TLPGYNL---------- 498 (587)
T ss_dssp HHH------------------HH-----HTSTTHHH------------HEEEE----------EESGGGS----------
T ss_pred HHH------------------HH-----HcCcchhh------------hcccc----------cCCCccc----------
Confidence 888 77 55555554 22111 1122110
Q ss_pred cccCCCHHHHHHHHHhhcCcccccccccccCCCCCCCCccCCCCeEeccCCeEEeecCCCCCCCCCCcHHHHHHHHHHHH
Q psy7389 641 FYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGVQNLRVVDASIMPKIVRGNTNAPTIMIAEKAA 720 (731)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~H~~GTcrMG~~d~~~~VVD~~~rV~g~~nL~V~DaSv~P~~~~~NP~lTi~AlA~r~A 720 (731)
....++++|++|++....+++|++||||||+ ++.+||||++|||||++||||||+||||+.+++||++|+||||+|+|
T Consensus 499 -~~~~sd~~~~~~ir~~~~t~~H~~GTcrMG~-~~~~sVVD~~lrV~Gv~nLrVvDaSv~P~~~~~Np~~ti~aiAeraA 576 (587)
T 1gpe_A 499 -VQNATLSQWSDYVLQNFRPNWHAVSSCSMMS-RELGGVVDATAKVYGTQGLRVIDGSIPPTQVSSHVMTIFYGMALKVA 576 (587)
T ss_dssp -CTTCCHHHHHHHHHHSCEECSCCBCTTCBSC-GGGTCSBCTTCBBTTCBSEEECSTTCCSSCCSSCSHHHHHHHHHHHH
T ss_pred -cCCCCHHHHHHHHHHhcCcccCccCccccCC-CCCCceECCCCEEECCCCcEEeeeccCCCCCCcchHHHHHHHHHHHH
Confidence 1235789999999999899999999999997 55679999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcc
Q psy7389 721 DMIKEDWIL 729 (731)
Q Consensus 721 ~~I~~~~~~ 729 (731)
|+|+++++.
T Consensus 577 d~I~~~~~~ 585 (587)
T 1gpe_A 577 DAILDDYAK 585 (587)
T ss_dssp HHHHHHHHH
T ss_pred HHHHhhhhc
Confidence 999998764
No 6
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=100.00 E-value=1.1e-73 Score=653.87 Aligned_cols=501 Identities=33% Similarity=0.476 Sum_probs=395.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCCCC--ccCCCCccccccCCCCCCCcccCCCccccccCCCCeeE
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPF--FADVPGLAPLISRSNIDWNYMTMPDPHACKARPNGRCY 193 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~~~--~~~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 193 (731)
.+|||||||+|.+|+++|.+|++++|.+|+|||+|..... ....|..+....+...+|.|.+.|++. .++.+.
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~p~~~~~~~~~~~~w~~~~~p~~~-----~~~~~~ 86 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDRGVPEVLQLDRWMELLESGYDWDYPIEPQEN-----GNSFMR 86 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCTTCHHHHBGGGGGGGTTSTTBCCEEBCCCSS-----SCTTCE
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCCCCccccChhhHHhhcCCcccccccccccCC-----CCceEE
Confidence 4799999999999999999999976899999999986532 234454433333567899999888774 467889
Q ss_pred eecceeeechhhhhcceeecCCHhhHHHHHH-cCCCCCChhhHHHHHHHhhcCCCcccccCCCCCCCCCCceeeecCCCC
Q psy7389 194 WARGKVMGGSSTINYMIYARGNAEDYDEWEA-MGNEGWGYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYA 272 (731)
Q Consensus 194 ~~~g~~lGG~S~~n~~~~~r~~~~d~~~w~~-~g~~~w~~~~l~~~~~~~e~~~~~~~~~~~~~~~g~~G~l~~~~~~~~ 272 (731)
+.+|+++||+|.+|++++.|+.+.||+.|++ .|.++|+|+++.|||+++|+.+.. . .+..++|..|++.+......
T Consensus 87 ~~rGk~lGGsS~in~~~~~R~~~~d~d~w~~~~G~~gW~~~~l~pyf~k~e~~~~~-~--~~~~~~g~~Gpl~v~~~~~~ 163 (546)
T 2jbv_A 87 HARAKVMGGCSSHNSCIAFWAPREDLDEWEAKYGATGWNAEAAWPLYKRLETNEDA-G--PDAPHHGDSGPVHLMNVPPK 163 (546)
T ss_dssp ECCBCSTTGGGGTSCCBCCCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHHEEETTC-B--TTBTTSCBSCSEEEEECCSC
T ss_pred eecccccccCccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhhccCC-C--CccccCCCCCCEEEecCCCC
Confidence 9999999999999999999999999999998 688999999999999999998762 1 01457778899999877777
Q ss_pred CChHHHHHHHHHHcCCCCCCCCCCC--CCCc-----------cccCCChhhhccHhhHhcCCCeEEEcCcEEEEEEecCC
Q psy7389 273 DKNLPVLIKAWKEKGYPERDLNAEN--QVGG-----------FICGDSTNGAFIRPIRKKRKNLTILTEAHVTRIIFDKT 339 (731)
Q Consensus 273 ~~~~~~~~~~~~~~G~~~~~~~~~~--~~G~-----------~r~~~s~~~~~L~~a~~~~~g~~i~~~t~V~~I~~~~~ 339 (731)
.+..+.+.++++++|++..+.+... ..|+ .|+ ++..+||.++.+ +.|++|++++.|++|+++++
T Consensus 164 ~~~~~~~~~a~~~~G~~~~d~n~~~~~~~g~~~~~~~~~~~g~R~--s~~~a~l~~a~~-~~~~~i~~~~~V~~i~~~~~ 240 (546)
T 2jbv_A 164 DPTGVALLDACEQAGIPRAKFNTGTTVVNGANFFQINRRADGTRS--SSSVSYIHPIVE-QENFTLLTGLRARQLVFDAD 240 (546)
T ss_dssp CHHHHHHHHHHHHTTCCBCCSSSSSCCSSEEEECEECBCTTSBBC--CHHHHHTGGGTT-CTTEEEECSCEEEEEEECTT
T ss_pred CHHHHHHHHHHHHCCCCccCCCCCCcCcceEEeeeeecCCCCeEc--CHHHHHHHHHhc-CCCcEEEeCCEEEEEEECCC
Confidence 8888999999999999876655543 2222 344 788889998877 78999999999999999742
Q ss_pred CCCCCceEEEEEEEEeC--CEEEEEEeccEEEecccCCCchHHHhhcCCCCcccccccCccceeecC-ccccccccccCc
Q psy7389 340 PNKHKKLVAKSVEFFYK--KKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKTLVDLK-VGHNLQDHLTSD 416 (731)
Q Consensus 340 g~~~~~~r~~GV~~~~~--g~~~~i~A~k~VVLAAGai~Tp~LLl~SGig~~~~l~~~gi~~~~~~p-VG~nL~dH~~~~ 416 (731)
+ +++||++... ++..+|+|+|+||||||+++||+||++|||||.+.|++.||++++|+| ||+||+||+..
T Consensus 241 -~-----~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~lL~~SGiG~~~~L~~~gi~~~~dlP~VG~nL~dH~~~- 313 (546)
T 2jbv_A 241 -R-----RCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLLMLSGIGPAAHLAEHGIEVLVDSPGVGEHLQDHPEG- 313 (546)
T ss_dssp -S-----BEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCCEEC-
T ss_pred -C-----eEEEEEEEECCCCcEEEEEeCccEEEecCccCCchhhhhcCCCchHHHHhcCCceEeeCcchhhhhhhCccc-
Confidence 4 7999999876 777899998789999999999999999999999999999999999999 99999999998
Q ss_pred eEEEEecCCcchhhhhhhHHhHHHHHHcCCCCCCCCCccceeEEEeccCCCCCCCCCeeEEecCCcccccccCcccCCCC
Q psy7389 417 GIVIAFPKTATDRMYKKKVSDAFEYKESRCGPLASTGPLQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASST 496 (731)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 496 (731)
.+.+.++.+. .. + . ....+...|.+.... ...|++++.+.+..+...+.. +. .
T Consensus 314 ~~~~~~~~~~-~~-----------~---~------~~~~~~~~f~~~~~~--~~~p~~~~~~~~~~~~~~~~~--~g--~ 366 (546)
T 2jbv_A 314 VVQFEAKQPM-VA-----------E---S------TQWWEIGIFTPTEDG--LDRPDLMMHYGSVPFDMNTLR--HG--Y 366 (546)
T ss_dssp CEEEEESSCC-CS-----------C---C------SSSCCEEEEECSSTT--CSSCSEEEEEESSCCCTTTGG--GT--C
T ss_pred eEEEEecCCC-cc-----------c---c------cchhheEEEEecCCC--CCCCceEEEeccccccccccc--cC--c
Confidence 6777766531 00 0 0 011234566654432 146788877655432100000 00 0
Q ss_pred CCCCCCCCCcEEEEEeecccCCccEEEccCCCCCCCCCeeccCCCCChh--HHHHHHhcchHHHHHHHHHhhhhcccCCC
Q psy7389 497 NMSPFAYYDGITVRPILLKPKSRGYIQLNATDPLWGPPLIFPKFFTKKP--DLDVFVADDLKPWIKAIVKKDIVDMWNSI 574 (731)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~p~srg~V~l~~~d~~~~~p~i~~~y~~~~~--D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 574 (731)
+ .....+++...+++|.|||+|+|+++|| .+.|.|+++|+.++. |++.+.++ ++.++
T Consensus 367 ---~-~~~~~~~~~~~~~~P~srG~V~L~s~dp-~~~P~I~~~y~~~~~~~D~~~~~~~-----~~~~~----------- 425 (546)
T 2jbv_A 367 ---P-TTENGFSLTPNVTHARSRGTVRLRSRDF-RDKPMVDPRYFTDPEGHDMRVMVAG-----IRKAR----------- 425 (546)
T ss_dssp ---C-CCSSEEEEEEEETTCCCCBEEECSSSCT-TSCCEEECCTTCCTTCHHHHHHHHH-----HHHHH-----------
T ss_pred ---c-CCCCeEEEEEEEcccCcccEEEecCCCC-CCCceecccccCCCchhHHHHHHHH-----HHHHH-----------
Confidence 0 1234567777789999999999999999 999999999999999 99999999 99888
Q ss_pred CCCccccccccccccccccccccchhhhhhhhhhccccceecccccccCCCCccCCCCcccccccccccCCCHHHHHHHH
Q psy7389 575 PPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQCGSVLTDLNKVFYKFGTWDYWACIA 654 (731)
Q Consensus 575 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (731)
++ +.+.++.. +...+ ..|+. ...++++|++|+
T Consensus 426 -------~i-----~~~~~~~~------------~~~~~----------~~p~~--------------~~~sd~~~~~~i 457 (546)
T 2jbv_A 426 -------EI-----AAQPAMAE------------WTGRE----------LSPGV--------------EAQTDEELQDYI 457 (546)
T ss_dssp -------HH-----HTSGGGTT------------TEEEE----------EESCT--------------TCCSHHHHHHHH
T ss_pred -------HH-----HcCcchhh------------ccccc----------ccCCC--------------CCCCHHHHHHHH
Confidence 77 55555555 22211 11221 235789999999
Q ss_pred HhhcCcccccccccccCCCCCCCCccCCCCeEeccCCeEEeecCCCCCCCCCCcHHHHHHHHHHHHHHHHhhhccC
Q psy7389 655 MQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGVQNLRVVDASIMPKIVRGNTNAPTIMIAEKAADMIKEDWILD 730 (731)
Q Consensus 655 ~~~~~~~~H~~GTcrMG~~d~~~~VVD~~~rV~g~~nL~V~DaSv~P~~~~~NP~lTi~AlA~r~A~~I~~~~~~~ 730 (731)
+....+++|++||||||++++.+||||++|||||++||||||+||||+++++||++||||||+|+||+|++++...
T Consensus 458 r~~~~~~~H~~GTcrMG~~~d~~~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~~~~~ 533 (546)
T 2jbv_A 458 RKTHNTVYHPVGTVRMGAVEDEMSPLDPELRVKGVTGLRVADASVMPEHVTVNPNITVMMIGERCADLIRSARAGE 533 (546)
T ss_dssp HHHCEECSCCBCTTCBCCTTCTTCSBCTTCBBTTSBSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHC-------
T ss_pred HhcCCcccccccccccCCCCCCCceECCCCEEECCCCeEEeecccCCCCCCcchHHHHHHHHHHHHHHHHhhcccC
Confidence 9998999999999999964457899999999999999999999999999999999999999999999999987653
No 7
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=100.00 E-value=1e-64 Score=578.34 Aligned_cols=473 Identities=25% Similarity=0.317 Sum_probs=329.3
Q ss_pred CCCCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCCC--CccCCCCcc-ccccCCCCCCCcccCCCccccccCCC
Q psy7389 113 DGDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEP--FFADVPGLA-PLISRSNIDWNYMTMPDPHACKARPN 189 (731)
Q Consensus 113 ~~~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~~--~~~~~p~~~-~~~~~~~~~w~~~~~~~~~~~~~~~~ 189 (731)
.+..+|||||||||++|+++|.+|++ |.+|||||||+... +....|..+ ..+.. .+| |.+.+|.. ..+
T Consensus 22 ~~~~~yD~IIVGsG~AG~v~A~rLse--g~~VlvLEaG~~~~~~~~~~~~~~~~~~~~~--~~~-~~t~~q~~----~~~ 92 (536)
T 1ju2_A 22 ELEGSYDYVIVGGGTSGCPLAATLSE--KYKVLVLERGSLPTAYPNVLTADGFVYNLQQ--EDD-GKTPVERF----VSE 92 (536)
T ss_dssp CSEEEEEEEEECCSTTHHHHHHHHTT--TSCEEEECSSBCGGGSGGGGBGGGHHHHHHS--CCC-SSSSEEEE----ECT
T ss_pred cccCcccEEEECccHHHHHHHHHHhc--CCcEEEEecCCCcCCCcceecchhHhhhccC--CCc-CcCCCccc----cCC
Confidence 34467999999999999999999999 89999999998642 212222111 11111 134 55555543 345
Q ss_pred CeeEeecceeeechhhhhcceeecCCHhhHHHHHHcCCCCCChhhHHHHHHHhhcCCCcccccCCCCCCCCCCceeeecC
Q psy7389 190 GRCYWARGKVMGGSSTINYMIYARGNAEDYDEWEAMGNEGWGYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWL 269 (731)
Q Consensus 190 ~~~~~~~g~~lGG~S~~n~~~~~r~~~~d~~~w~~~g~~~w~~~~l~~~~~~~e~~~~~~~~~~~~~~~g~~G~l~~~~~ 269 (731)
+.+.+.+|+++||+|.+|++++.|+.+.||+.+ | .+|.|+++.+||+++|+.+...
T Consensus 93 ~~~~~~rg~~lGGsS~in~~~~~R~~~~d~~~~---G-~~W~~~~~~p~~~~~e~~~~~~-------------------- 148 (536)
T 1ju2_A 93 DGIDNVRGRVLGGTSIINAGVYARANTSIYSAS---G-VDWDMDLVNQTYEWVEDTIVYK-------------------- 148 (536)
T ss_dssp TSCEEEEECBTTGGGGTSCCEECBCCTTSSTTS---S-SCCCHHHHHHHHHHHHHHHCBC--------------------
T ss_pred CcceeecceeccccccccCeEEEeCCHHHHhhc---c-CCCChHHHHHHHHhhhcccCCC--------------------
Confidence 678889999999999999999999999998632 2 2599999999999999864320
Q ss_pred CCCCChHHHHHHHHHHcCCCCC-----CCCCCCCCCc-------cccCCChhhhccHhhHhcCCCeEEEcCcEEEEEEec
Q psy7389 270 PYADKNLPVLIKAWKEKGYPER-----DLNAENQVGG-------FICGDSTNGAFIRPIRKKRKNLTILTEAHVTRIIFD 337 (731)
Q Consensus 270 ~~~~~~~~~~~~~~~~~G~~~~-----~~~~~~~~G~-------~r~~~s~~~~~L~~a~~~~~g~~i~~~t~V~~I~~~ 337 (731)
+...+....+.+++.++|++.. +...+..+|. .|+ ++.. |+.. ++ +.|++|++++.|++|+++
T Consensus 149 ~~~~~~~~~~~~a~~~~G~~~~~~~~~~~~~g~~~g~~~~~~~g~r~--s~~~-~~~~-~~-~~~~~v~~~~~v~~i~~~ 223 (536)
T 1ju2_A 149 PNSQSWQSVTKTAFLEAGVHPNHGFSLDHEEGTRITGSTFDNKGTRH--AADE-LLNK-GN-SNNLRVGVHASVEKIIFS 223 (536)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCEEEECCBCCSEEEECEESBCTTSBBC--CGGG-GGGG-SC-TTTEEEEESCEEEEEEEC
T ss_pred CCCCcHHHHHHHHHHHcCCCCCCCcccCCCCCceeeeEEECCCCeEe--cHHH-hhhh-hc-CCCcEEEeCCEEEEEEEC
Confidence 0123445778888899998531 1111111111 344 5544 6655 45 789999999999999998
Q ss_pred CC-CCCCCceEEEEEEEEe-CCEEEEEE--eccEEEecccCCCchHHHhhcCCCCcccccccCccceeecC-cccccccc
Q psy7389 338 KT-PNKHKKLVAKSVEFFY-KKKLRRAR--AKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKTLVDLK-VGHNLQDH 412 (731)
Q Consensus 338 ~~-g~~~~~~r~~GV~~~~-~g~~~~i~--A~k~VVLAAGai~Tp~LLl~SGig~~~~l~~~gi~~~~~~p-VG~nL~dH 412 (731)
+. ++ +++||++.+ ++...+++ +.|+||||||+|+||+||++||||+.+.|++.||++++|+| ||+||+||
T Consensus 224 ~~~~~-----~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~lL~~SGig~~~~l~~~gi~~~~dlP~VG~NL~DH 298 (536)
T 1ju2_A 224 NAPGL-----TATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLLLSGVGPESYLSSLNIPVVLSHPYVGQFLHDN 298 (536)
T ss_dssp CSSSC-----BEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTEEEECC
T ss_pred CCCCC-----EEEEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHHHHHcCCCCHHHHHhcCCceEecCcccccchhcC
Confidence 52 23 799999986 56655564 55589999999999999999999999999999999999999 99999999
Q ss_pred ccCceEEEEecCCcchhhhh-hhHHhHHHHHHcCCCCCCCCCccceeEEEeccCCCCCCCCCeeEEecCCcccccccCcc
Q psy7389 413 LTSDGIVIAFPKTATDRMYK-KKVSDAFEYKESRCGPLASTGPLQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPV 491 (731)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 491 (731)
+.. .+.+.++.+....+.. .... ..|...+.|++. . ..+.+ .+.+ .+
T Consensus 299 ~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~------------~------~~~~~--~~~~----~~----- 346 (536)
T 1ju2_A 299 PRN-FINILPPNPIEPTIVTVLGIS--NDFYQCSFSSLP------------F------TTPPF--GFFP----SS----- 346 (536)
T ss_dssp EEE-EEEECCSSCCCCCCCCEEEEC--SSEEEEEEEECC------------C------SSCCB--TTBS----SS-----
T ss_pred cce-eEEEEeCCCcccccchhhhHH--HHHHHcCCCCCC------------C------Chhhh--eeec----Cc-----
Confidence 987 6666655431100000 0000 001000111100 0 00000 0000 00
Q ss_pred cCCCCCCCCCCCCCcEEEEEeecccCCccEEEc-cCCCCCCCCCeeccCCCCChhHHHHHHhcchHHHHHHHHHhhhhcc
Q psy7389 492 NASSTNMSPFAYYDGITVRPILLKPKSRGYIQL-NATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAIVKKDIVDM 570 (731)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~p~srg~V~l-~~~d~~~~~p~i~~~y~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~ 570 (731)
...+.......+...+++|.|||+|+| +++|| .+.|.|+++|+.++.|++.++++ ++.++
T Consensus 347 ------~~~~~~~~~~~~~~~l~~P~SrG~V~L~~s~Dp-~~~P~i~~~y~~~~~D~~~~~~~-----~~~~~------- 407 (536)
T 1ju2_A 347 ------SYPLPNSTFAHFASKVAGPLSYGSLTLKSSSNV-RVSPNVKFNYYSNLTDLSHCVSG-----MKKIG------- 407 (536)
T ss_dssp ------CCCCCSSCEEEEEEEESSCSCCEEEECSCSSCT-TSCCEECCCTTCSHHHHHHHHHH-----HHHHH-------
T ss_pred ------ccCCCCcceEEEeeecCCCCcceEEEeCCCCCc-ccCceecccccCCccHHHHHHHH-----HHHHH-------
Confidence 001111122234456788999999999 88999 99999999999999999999999 99888
Q ss_pred cCCCCCCccccccccccccccccccccchhhhhhhhhhccccceecccccccCCCCccCCCCcccccccccccCCCHHHH
Q psy7389 571 WNSIPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQCGSVLTDLNKVFYKFGTWDYW 650 (731)
Q Consensus 571 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 650 (731)
++ +.+.++.. +...+ . .+.|++.... .. ......++++|
T Consensus 408 -----------~i-----~~~~~~~~------------~~~~~------~--~~~p~~~~~~--~~---~p~~~~~d~~~ 446 (536)
T 1ju2_A 408 -----------EL-----LSTDALKP------------YKVED------L--PGVEGFNILG--IP---LPKDQTDDAAF 446 (536)
T ss_dssp -----------HH-----HTSGGGGG------------GCSSC------C--STTCSCCBSS--SC---CCSCTTCHHHH
T ss_pred -----------HH-----HcCccchh------------hhccc------c--ccCCCccccc--cC---CCcccCCHHHH
Confidence 77 66655655 22211 0 0112211000 00 00013478999
Q ss_pred HHHHHhhcCcccccccccccCCCCCCCCccCCCCeEeccCCeEEeecCCCCCCCCCCcHHHHHHHHHHHHHHHHhh
Q psy7389 651 ACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGVQNLRVVDASIMPKIVRGNTNAPTIMIAEKAADMIKED 726 (731)
Q Consensus 651 ~~~~~~~~~~~~H~~GTcrMG~~d~~~~VVD~~~rV~g~~nL~V~DaSv~P~~~~~NP~lTi~AlA~r~A~~I~~~ 726 (731)
++|++....+.+|++|||||| +|||++|||||++|||||||||||+.+++||++|+||||+|+|+.|+++
T Consensus 447 ~~~ir~~~~t~~H~~GTcrMG------~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~t~~aiAer~A~~ii~~ 516 (536)
T 1ju2_A 447 ETFCRESVASYWHYHGGCLVG------KVLDGDFRVTGINALRVVDGSTFPYTPASHPQGFYLMLGRYVGIKILQE 516 (536)
T ss_dssp HHHHHHHCEECSCCEESSCBT------TTBCTTSBBTTCBTEEECSGGGCSSCSSSSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccCccccCcCccCCc------cEECCCCeEcCCCCeEEeecccCCCCCCcchHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999 5999999999999999999999999999999999999999988766654
No 8
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=100.00 E-value=7.8e-61 Score=549.51 Aligned_cols=495 Identities=23% Similarity=0.289 Sum_probs=336.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCCCCcc--CCCCccc-cccCCCCCCC-----cccCCCccccccC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFA--DVPGLAP-LISRSNIDWN-----YMTMPDPHACKAR 187 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~~~~~--~~p~~~~-~~~~~~~~w~-----~~~~~~~~~~~~~ 187 (731)
.+|||||||||++|+++|.+|+++ |++|+|||+|+...... .....+. ......+.+. ....+... .
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~-g~~VlvlE~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~----~ 80 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEA-GKKVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDIPGLFESLFTDSNPF----W 80 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCCCSGGGTCCCCCGGGGGGTCCTTTCGGGGGGGGTCSCCT----T
T ss_pred CceeEEEECcCHHHHHHHHHHHhC-CCeEEEEeCCCCCcccccccccccccccccceeeccchhHHHhhcCCCcc----c
Confidence 479999999999999999999998 99999999997542110 0000000 0000000000 00000000 0
Q ss_pred CCCeeEeecceeeechhhhhcceeecCCHhhHHH---HHHcCCCCCChhhHHHHHHHhhcCCCcccccCCCCCCCCCCce
Q psy7389 188 PNGRCYWARGKVMGGSSTINYMIYARGNAEDYDE---WEAMGNEGWGYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQ 264 (731)
Q Consensus 188 ~~~~~~~~~g~~lGG~S~~n~~~~~r~~~~d~~~---w~~~g~~~w~~~~l~~~~~~~e~~~~~~~~~~~~~~~g~~G~l 264 (731)
......+.+|+++||+|.+|++.+.|+.+.||+. | ..+|+|++ +||+++|...... ..+...|+.
T Consensus 81 ~~~~~~~~~g~~lGGsS~in~~~~~r~~~~d~d~~~~W----~~~w~~~~--p~~~k~e~~~~~~------~~~~~~g~~ 148 (546)
T 1kdg_A 81 WCKDITVFAGCLVGGGTSVNGALYWYPNDGDFSSSVGW----PSSWTNHA--PYTSKLSSRLPST------DHPSTDGQR 148 (546)
T ss_dssp BCTTBSSCCBCSTTGGGGTSCCBCCCCCGGGGCGGGTC----CGGGSCCH--HHHHHHHHHSCCB------SCCSTTSCC
T ss_pred cccccccccceeecccccccceEEecCChHHhcCcccC----ccccCccc--HHHHHHHhcCCCC------ccCCCCCCc
Confidence 0112456789999999999999999999999987 7 35788887 9999998854321 112222321
Q ss_pred eeecCCCCCChHHHHHHHHHHcCCCCCCCCC---CCCCCc----------cccCCChhhhccHhhHhcCCCeEEEcCcEE
Q psy7389 265 TVEWLPYADKNLPVLIKAWKEKGYPERDLNA---ENQVGG----------FICGDSTNGAFIRPIRKKRKNLTILTEAHV 331 (731)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~---~~~~G~----------~r~~~s~~~~~L~~a~~~~~g~~i~~~t~V 331 (731)
+..+....+.++++++|++..+.+. ....|+ .|+ ++..+||.++.+ +.|++|++++.|
T Consensus 149 ------~~~~~~~~~~~a~~~~G~~~~~~~~~~~~~~~g~~~~~~~~~~g~R~--s~~~~~l~~~~~-~~~~~i~~~~~V 219 (546)
T 1kdg_A 149 ------YLEQSFNVVSQLLKGQGYNQATINDNPNYKDHVFGYSAFDFLNGKRA--GPVATYLQTALA-RPNFTFKTNVMV 219 (546)
T ss_dssp ------CSCHHHHHHHHHHHTTTCEECCGGGSTTCCTTEEEECCBCEETTEEC--HHHHTHHHHHHT-CTTEEEECSCCE
T ss_pred ------cCCHHHHHHHHHHHHCCCCcCCccCCcCCCCcEEeeeeeccCCCccc--CHHHHHHHHHhh-CCCcEEEeCCEE
Confidence 2345567788888999986533221 011111 455 677889998887 789999999999
Q ss_pred EEEEecCCCCCCCceEEEEEEEEe--CCE--EEEEEeccEEEecccCCCchHHHhhcCCCCccccccc------Cccce-
Q psy7389 332 TRIIFDKTPNKHKKLVAKSVEFFY--KKK--LRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSL------NIKTL- 400 (731)
Q Consensus 332 ~~I~~~~~g~~~~~~r~~GV~~~~--~g~--~~~i~A~k~VVLAAGai~Tp~LLl~SGig~~~~l~~~------gi~~~- 400 (731)
++|++++ + +++||++.+ +|. ..++.+.|+||||||+++||+||++||||+.+.|++. ||+++
T Consensus 220 ~~i~~~~--~-----~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~sGig~~~~L~~~gn~s~~GI~v~~ 292 (546)
T 1kdg_A 220 SNVVRNG--S-----QILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGIGPTDMIQTVQSNPTAAAALPP 292 (546)
T ss_dssp EEEEEET--T-----EEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHHTTBSCHHHHHHHHTSHHHHHHSCC
T ss_pred EEEEEeC--C-----EEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHHcCCCcHHHHHHhhccccCCccccc
Confidence 9999973 4 899999876 343 3345444589999999999999999999999999998 69885
Q ss_pred ----eecCccccccccccCceEEEEecCC-cchhh----hhhhHHhHHHHHHcCCCCCCCCCccceeEEEeccCCCCCCC
Q psy7389 401 ----VDLKVGHNLQDHLTSDGIVIAFPKT-ATDRM----YKKKVSDAFEYKESRCGPLASTGPLQCGVFAKTKLADSLDV 471 (731)
Q Consensus 401 ----~~~pVG~nL~dH~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 471 (731)
+|+|||+||+||+.+ .+.+..+.. ....+ ..........|...+.|++.... .. ..++..........
T Consensus 293 ~~~~~dlpVG~nL~DH~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~-~~~~~~~~~~~~~~ 369 (546)
T 1kdg_A 293 QNQWINLPVGMNAQDNPSI-NLVFTHPSIDAYENWADVWSNPRPADAAQYLANQSGVFAGAS-PK-LNFWRAYSGSDGFT 369 (546)
T ss_dssp GGGCBCCCTTTTBBCCCCE-EEEEECTTCCCGGGGTTTTTSCCHHHHHHHHHHSCSGGGSCS-CC-EEEEEEEECTTSCE
T ss_pred ccccccCCcccCcccCcce-eEEEecCCcccccchhhhhcchhHHHHHHHHHcCCcccccCC-cc-eEEEEccCCCCcch
Confidence 798999999999988 566662221 11111 01112334567667888876432 12 23444322110011
Q ss_pred CCeeEEecCCcccccccCcccCCCCCCCCCCCCCcEEEEEeeccc-CCccEEEccCCCCCCCCCeeccCCCCChhHHHHH
Q psy7389 472 PDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPILLKP-KSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVF 550 (731)
Q Consensus 472 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~srg~V~l~~~d~~~~~p~i~~~y~~~~~D~~~~ 550 (731)
+.++..+.+.... + ..+.+......+++...+++| .|||+|+|++.| ..|.|+++|+.++.|++.+
T Consensus 370 ~~~~~~~~~~~~~--~--------~~~~~~~~~~~~~~~~~~~~p~~srG~v~L~s~~---~~~~i~~~y~~~~~D~~~~ 436 (546)
T 1kdg_A 370 RYAQGTVRPGAAS--V--------NSSLPYNASQIFTITVYLSTGIQSRGRIGIDAAL---RGTVLTPPWLVNPVDKTVL 436 (546)
T ss_dssp EEEEEEEEESCSC--C--------CCSSCCCGGGEEEEEEEECTTCCCCBEEEECTTC---CEEEEECCTTCSHHHHHHH
T ss_pred hhhhheecccccc--c--------ccccccCCCCeEEEEeeecCCCCCCceEecCCCC---CCCcccccccCCchHHHHH
Confidence 2233222221100 0 011111223456777778888 999999998865 3467888999999999999
Q ss_pred HhcchHHHHHHHHHhhhhcccCCCCCCccccccccccccccccccccchhhhhhhhhhccccceecccccccCCCCccCC
Q psy7389 551 VADDLKPWIKAIVKKDIVDMWNSIPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQC 630 (731)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 630 (731)
+++ ++.++ ++ +.+..... + ..|+.
T Consensus 437 ~~~-----~~~~~------------------~~-----~~~~~~~~-----------------------~---~~p~~-- 460 (546)
T 1kdg_A 437 LQA-----LHDVV------------------SN-----IGSIPGLT-----------------------M---ITPDV-- 460 (546)
T ss_dssp HHH-----HHHHT------------------TT-----GGGSTTCE-----------------------E---EESCT--
T ss_pred HHH-----HHHHH------------------HH-----hcCCCccc-----------------------c---cCCCC--
Confidence 999 99888 77 32211110 0 01211
Q ss_pred CCcccccccccccCCCHHHHHHHHHhhcCcccccccccccCCCCCCCCccCCCCeEeccCCeEEeecCCCCCCCCCCcHH
Q psy7389 631 GSVLTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGVQNLRVVDASIMPKIVRGNTNA 710 (731)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~GTcrMG~~d~~~~VVD~~~rV~g~~nL~V~DaSv~P~~~~~NP~l 710 (731)
..+++++.++++....+++|++||||||+ ++.+||||++|||||++|||||||||||+.+++||++
T Consensus 461 -------------~~~~~~~~~~~~~~~~t~~H~~GTcrMG~-~~~~~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~ 526 (546)
T 1kdg_A 461 -------------TQTLEEYVDAYDPATMNSNHWVSSTTIGS-SPQSAVVDSNVKVFGTNNLFIVDAGIIPHLPTGNPQG 526 (546)
T ss_dssp -------------TSCHHHHHHHSCGGGGCCSCCBCTTCBCS-CTTTCSBCTTCBBTTCSSEEECSGGGCSSCCSSCSHH
T ss_pred -------------CCCHHHHHHHHHHhcCcccccccceecCC-CCCCeeECCCCeEccCCCcEEeEecccCCCCCccHHH
Confidence 12577788888888889999999999998 4678999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcc
Q psy7389 711 PTIMIAEKAADMIKEDWIL 729 (731)
Q Consensus 711 Ti~AlA~r~A~~I~~~~~~ 729 (731)
|+||||+|+||+|++++++
T Consensus 527 ti~aiAeraAd~I~~~~~~ 545 (546)
T 1kdg_A 527 TLMSAAEQAAAKILALAGG 545 (546)
T ss_dssp HHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHHHHhhcCC
Confidence 9999999999999998864
No 9
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=100.00 E-value=1.7e-56 Score=507.61 Aligned_cols=447 Identities=18% Similarity=0.137 Sum_probs=311.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCCCC-c--cCCCCccccccCCCCCCCcccCCCc-----------
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPF-F--ADVPGLAPLISRSNIDWNYMTMPDP----------- 181 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~~~-~--~~~p~~~~~~~~~~~~w~~~~~~~~----------- 181 (731)
.+||+||||+|.+|+++|.+|++. |.+|+|||+|..... . ...+... .......+|.+.+.|+.
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~-~~~v~~~e~~~~~~~~~~~~~~~~~~-~~~~~~~~w~~~t~p~~~~~~l~~~~~~ 81 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEA-GVQTLMLEMGQLWNQPGPDGNIFCGM-LNPDKRSSWFKNRTEAPLGSFLWLDVVN 81 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCCCCCCCTTSSSSCCT-TSCCGGGSBSCSBCCCCTTCHHHHGGGC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC-CCcEEEEeCCCCCCCCCCcccccccc-cccCcccccccccccccccccccccccc
Confidence 379999999999999999999997 999999999985431 1 1222111 12233578999887762
Q ss_pred ---ccccc----CCCCeeEeecceeeechhhhhcceeecCCHhhHHHHHHcCCCCCChhhHH-HHHHHhhcCCCcccccC
Q psy7389 182 ---HACKA----RPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEWEAMGNEGWGYDEVL-EYFKKSEDNEDKEIYHK 253 (731)
Q Consensus 182 ---~~~~~----~~~~~~~~~~g~~lGG~S~~n~~~~~r~~~~d~~~w~~~g~~~w~~~~l~-~~~~~~e~~~~~~~~~~ 253 (731)
..... ..++.+.+.+|+++||+|.+|++++.|+.+.||+.|. +.|.|++++ |||+++|+.+.+..
T Consensus 82 ~~~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~Dfd~w~----~~w~~~~l~~pyy~~~E~~~~~~~--- 154 (504)
T 1n4w_A 82 RNIDPYAGVLDRVNYDQMSVYVGRGVGGGSLVNGGMAVEPKRSYFEEIL----PRVDSSEMYDRYFPRANSMLRVNH--- 154 (504)
T ss_dssp CBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHC----TTSCHHHHHHTHHHHHHHHHTCBC---
T ss_pred ccccccccccceecCCceEEEEeeecchHHHhhCeEEEeCCHHHHHHhc----cccchhhhhhHHHHHHHHHhCCCC---
Confidence 01111 1567889999999999999999999999999999995 578999999 99999999765422
Q ss_pred CCCCCCCCCceeeecCCCCCChHHHHHHHHHHcCC-----CC-CCCCC-----------CCCC-----Cc--cccCCChh
Q psy7389 254 NPEYHGKGGYQTVEWLPYADKNLPVLIKAWKEKGY-----PE-RDLNA-----------ENQV-----GG--FICGDSTN 309 (731)
Q Consensus 254 ~~~~~g~~G~l~~~~~~~~~~~~~~~~~~~~~~G~-----~~-~~~~~-----------~~~~-----G~--~r~~~s~~ 309 (731)
. .+... ...+ ..+..+.+.++++++|+ +. .++++ +..+ ++ .|. ++.
T Consensus 155 ~------~~~~~-~~~~-~~p~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~g~~~~~~~~G~c~~g~~~gr~--s~~ 224 (504)
T 1n4w_A 155 I------DTKWF-EDTE-WYKFARVSREQAGKAGLGTVFVPNVYDFGYMQREAAGEVPKSALATEVIYGNNHGKQ--SLD 224 (504)
T ss_dssp C------CHHHH-HHCG-GGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTSSCCSGGGTCSTTCCSSSBC--CTT
T ss_pred C------Ccccc-cCCC-cchHHHHHHHHHHHcCCCCccCCcccccCccccccCccccCCcccccccccCCCCcc--CHH
Confidence 0 00000 0000 13456788899999998 33 22221 1111 11 144 778
Q ss_pred hhccHhhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEe-CC---EEEEEEeccEEEecccCCCchHHHhhcC
Q psy7389 310 GAFIRPIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFY-KK---KLRRARAKKEVISSAGAINSPKILMLSG 385 (731)
Q Consensus 310 ~~~L~~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~-~g---~~~~i~A~k~VVLAAGai~Tp~LLl~SG 385 (731)
.+||.++.+ +.|++|++++.|++|+++++++ +++||++.+ ++ +..+|+|+ +||||||+|+||+||++||
T Consensus 225 ~~~l~~a~~-~~n~~i~~~~~V~~i~~~~~g~-----~~~gV~~~~~~g~~~~~~~v~A~-~VIlaaG~~~s~~lL~~Sg 297 (504)
T 1n4w_A 225 KTYLAAALG-TGKVTIQTLHQVKTIRQTKDGG-----YALTVEQKDTDGKLLATKEISCR-YLFLGAGSLGSTELLVRAR 297 (504)
T ss_dssp TTHHHHHHH-TTSEEEEESEEEEEEEECTTSS-----EEEEEEEECTTCCEEEEEEEEEE-EEEECSHHHHHHHHHHHHH
T ss_pred HHHHHHHHh-cCCcEEEeCCEEEEEEECCCCC-----EEEEEEEeCCCCccceeEEEeeC-EEEEccCCCCCHHHHHhcc
Confidence 889988887 7789999999999999986445 899999985 55 56789998 8999999999999999999
Q ss_pred -CCCcccccccCccceeecCccccccccccCceEEEEecCCcchhhhhhhHHhHHHHHHcCCCCCCCCCccceeEEEecc
Q psy7389 386 -IGPKDHLTSLNIKTLVDLKVGHNLQDHLTSDGIVIAFPKTATDRMYKKKVSDAFEYKESRCGPLASTGPLQCGVFAKTK 464 (731)
Q Consensus 386 -ig~~~~l~~~gi~~~~~~pVG~nL~dH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~ 464 (731)
|| |||++.+ .||+||+||+.. .+.+..... ...|++.. ......+.+..
T Consensus 298 ~ig--------~i~~~~~-~VG~nl~dh~~~-~~~~~~~~~------------------~~~~~~~~--~~~~~~~~~~~ 347 (504)
T 1n4w_A 298 DTG--------TLPNLNS-EVGAGWGPNGNI-MTARANHMW------------------NPTGAHQS--SIPALGIDAWD 347 (504)
T ss_dssp HTT--------SSTTCCT-TTTCCBBCTTCE-EEEEECCTT------------------CCCCSCCC--SSCCEEEEECC
T ss_pred ccC--------CCCCCCh-hhccccccCCcc-eeeeccCCC------------------CcccCcCC--CccEEEEeccC
Confidence 87 5666543 299999999986 443322110 01233221 12233444433
Q ss_pred CCCCCCCCCeeEEecCCcccccccCcccCCCCCCCCCCCCCcEEEEEeecccCCccEEEccCCCCCCCCCeeccCCCCCh
Q psy7389 465 LADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPILLKPKSRGYIQLNATDPLWGPPLIFPKFFTKK 544 (731)
Q Consensus 465 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~srg~V~l~~~d~~~~~p~i~~~y~~~~ 544 (731)
.. ..|+++..+. +. ..+ . ..++++..+.+|.|||+|+|+++|| .|+++|+.++
T Consensus 348 ~~---~~~~~~~~~~---~~-----------~~~---~--~~~~~~~~~~~p~srG~V~L~s~~~-----~i~~~~~~~~ 400 (504)
T 1n4w_A 348 NS---DSSVFAEIAP---MP-----------AGL---E--TWVSLYLAITKNPQRGTFVYDAATD-----RAKLNWTRDQ 400 (504)
T ss_dssp SS---TTCEEEEEEC---CC-----------CSS---C--CCEEEEEEEECCCCCBCEEEETTTT-----EEEECCCGGG
T ss_pred CC---CCceEEEecc---CC-----------hHH---H--hhhhhheeeeccCCCcEEEecCCCC-----ceEeccCCCc
Confidence 11 2354443321 00 000 1 3455666778899999999988665 6899999999
Q ss_pred hHHHHHHhcchHHHHH-HHHHhhhhcccCCCCCCccccccccccccccccccccchhhhhhhhhhccccceecccccccC
Q psy7389 545 PDLDVFVADDLKPWIK-AIVKKDIVDMWNSIPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKL 623 (731)
Q Consensus 545 ~D~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (731)
| +.++++ ++ .++ ++ ....+. - .+.
T Consensus 401 -D-~~~~~~-----~~~~~~------------------~i-----~~~~~~-~------------~~~------------ 425 (504)
T 1n4w_A 401 -N-APAVNA-----AKALFD------------------RI-----NKANGT-I------------YRY------------ 425 (504)
T ss_dssp -G-HHHHHH-----HHHHHH------------------HH-----HHHHTC-C------------BCC------------
T ss_pred -C-HHHHHH-----HHHHHH------------------HH-----HhccCC-C------------cCC------------
Confidence 8 677777 66 555 44 111100 0 000
Q ss_pred CCCccCCCCcccccccccccCCCHHHHHHHHHhhcCcccccccccccCCCCCCCCccCCCCeEeccCCeEEeecCCCCCC
Q psy7389 624 PPPICQCGSVLTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGVQNLRVVDASIMPKI 703 (731)
Q Consensus 624 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~GTcrMG~~d~~~~VVD~~~rV~g~~nL~V~DaSv~P~~ 703 (731)
+... . +|+++ ...+++|++|||||| +|||++|||||++||||||+||||++
T Consensus 426 --~~~~----------------~--~~~~~---~~~~~~H~~GTcrMG------~VVD~~~rV~Gv~nLrVvDaSv~P~~ 476 (504)
T 1n4w_A 426 --DLFG----------------T--QLKAF---ADDFCYHPLGGCVLG------KATDDYGRVAGYKNLYVTDGSLIPGS 476 (504)
T ss_dssp --SSSS----------------S--SCCSE---ECSEESSCBCSSCTT------TTBCTTSBBTTCSSEEECSGGGSCSC
T ss_pred --chhh----------------h--hhhhh---ccCccccccCCceee------eEECCCCeEeccCCeEEeeccccCCC
Confidence 0000 0 00000 245789999999999 79999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHHHHHHHHhhhcc
Q psy7389 704 VRGNTNAPTIMIAEKAADMIKEDWIL 729 (731)
Q Consensus 704 ~~~NP~lTi~AlA~r~A~~I~~~~~~ 729 (731)
+++||++||||||+|+||+|++++..
T Consensus 477 ~~~np~~ti~aiAeraAd~I~~~~~~ 502 (504)
T 1n4w_A 477 VGVNPFVTITALAERNVERIIKQDVT 502 (504)
T ss_dssp CSSCSHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCcChHHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999999998753
No 10
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=100.00 E-value=2.5e-55 Score=498.16 Aligned_cols=445 Identities=17% Similarity=0.133 Sum_probs=305.9
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCCCCccCCCC---ccccc-cCCCCCCCcccCCCccc------
Q psy7389 114 GDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVPG---LAPLI-SRSNIDWNYMTMPDPHA------ 183 (731)
Q Consensus 114 ~~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~~~~~~~p~---~~~~~-~~~~~~w~~~~~~~~~~------ 183 (731)
+..+||+||||||.+|+++|.+|++. |.+|+|||+|..... ..|. ..... .....+|.+.+.||...
T Consensus 8 ~~~~~d~~iiG~G~~g~~~a~~l~~~-~~~v~~~e~~~~~~~--~~p~~~~~~~~~~~~~~~~w~~~~~pq~~~~~~~~~ 84 (507)
T 1coy_A 8 DGDRVPALVIGSGYGGAVAALRLTQA-GIPTQIVEMGRSWDT--PGSDGKIFCGMLNPDKRSMWLADKTDQPVSNFMGFG 84 (507)
T ss_dssp TTCEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCCSCS--CCTTSCSSCCSSSCCTTSBBSCSBCCCSSCSBTTBS
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHHC-CCcEEEEECCCCCCC--CCCccccccccccccccccccccccccccccccccc
Confidence 34589999999999999999999997 999999999985432 1222 11112 23457999988886210
Q ss_pred -----cccC------CCCeeEeecceeeechhhhhcceeecCCHhhHHHHHHcCCCCCChhhHH-HHHHHhhcCCCcccc
Q psy7389 184 -----CKAR------PNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEWEAMGNEGWGYDEVL-EYFKKSEDNEDKEIY 251 (731)
Q Consensus 184 -----~~~~------~~~~~~~~~g~~lGG~S~~n~~~~~r~~~~d~~~w~~~g~~~w~~~~l~-~~~~~~e~~~~~~~~ 251 (731)
.... .++.+.+.+|++|||+|.+|++++.|+.+.||+.|. +.|.|++++ |||+++|+++.+..
T Consensus 85 ~~~~~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~dfd~w~----~~w~~~~l~~pyy~~~E~~~~~~~- 159 (507)
T 1coy_A 85 INKSIDRYVGVLDSERFSGIKVYQGRGVGGGSLVNGGMAVTPKRNYFEEIL----PSVDSNEMYNKYFPRANTGLGVNN- 159 (507)
T ss_dssp CCCBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHC----TTSCHHHHHHTHHHHHHHHHTCBC-
T ss_pred cccccccccceeeEecCCCeEEEEecccchHHHhhCeEEeeCCHHHHHhhC----CccchhcchhHHHHHHHHHhCCCC-
Confidence 0111 467889999999999999999999999999999995 478999999 99999999876422
Q ss_pred cCCCCCCCCCCceeeecCCCCCChHHHHHHHHHHcCC-----CC-CCCCC-----------CCCCC-----c--cccCCC
Q psy7389 252 HKNPEYHGKGGYQTVEWLPYADKNLPVLIKAWKEKGY-----PE-RDLNA-----------ENQVG-----G--FICGDS 307 (731)
Q Consensus 252 ~~~~~~~g~~G~l~~~~~~~~~~~~~~~~~~~~~~G~-----~~-~~~~~-----------~~~~G-----~--~r~~~s 307 (731)
...... . .....+....+.++++++|+ +. .++++ +..+| + .|+ +
T Consensus 160 --------~~~~~~-~-~~~~~~~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~~~~~~~~~~g~C~~gc~~gR~--s 227 (507)
T 1coy_A 160 --------IDQAWF-E-STEWYKFARTGRKTAQRSGFTTAFVPNVYDFEYMKKEAAGQVTKSGLGGEVIYGNNAGKK--S 227 (507)
T ss_dssp --------CCHHHH-H-HCGGGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTCSCCSTTTTCSTTCCSSSBC--C
T ss_pred --------CCCccc-c-ccccchHHHHHHHHHHHcCCCCccCCcccccCcccccCCCcccCccccccccccCCCCCc--C
Confidence 001000 0 00013456788899999999 43 23221 11111 1 155 7
Q ss_pred hhhhccHhhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEe-CC---EEEEEEeccEEEecccCCCchHHHhh
Q psy7389 308 TNGAFIRPIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFY-KK---KLRRARAKKEVISSAGAINSPKILML 383 (731)
Q Consensus 308 ~~~~~L~~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~-~g---~~~~i~A~k~VVLAAGai~Tp~LLl~ 383 (731)
+..+||.++.+ +.|++|++++.|++|+++++++ +++||++.. ++ ...+|+|+ +||||||+|+||+||++
T Consensus 228 ~~~~~l~~a~~-~~n~~i~~~~~v~~i~~~~~g~-----~~~gV~~~~~~g~~~~~~~~~A~-~VIlaaGa~~sp~lL~~ 300 (507)
T 1coy_A 228 LDKTYLAQAAA-TGKLTITTLHRVTKVAPATGSG-----YSVTMEQIDEQGNVVATKVVTAD-RVFFAAGSVGTSKLLVS 300 (507)
T ss_dssp TTTTHHHHHHH-TTCEEEECSEEEEEEEECSSSS-----EEEEEEEECTTSCEEEEEEEEEE-EEEECSHHHHHHHHHHH
T ss_pred hHHHHHHHHHh-cCCcEEEeCCEEEEEEECCCCC-----EEEEEEEeCCCCcccccEEEEeC-EEEEccCccCCHHHHHh
Confidence 78899998887 7789999999999999985444 799999986 55 46789998 89999999999999999
Q ss_pred cC-CCCcccccccCccceeecC-ccccccccccCceEEEEecCCcchhhhhhhHHhHHHHHHcCCCCCCCCCccceeEEE
Q psy7389 384 SG-IGPKDHLTSLNIKTLVDLK-VGHNLQDHLTSDGIVIAFPKTATDRMYKKKVSDAFEYKESRCGPLASTGPLQCGVFA 461 (731)
Q Consensus 384 SG-ig~~~~l~~~gi~~~~~~p-VG~nL~dH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~ 461 (731)
|| ||+ +|.. .+ ||+||++|+.. .+...... + ...|++.... ....+.
T Consensus 301 Sg~iG~--------lpnl--~d~VG~~l~~h~~~-~~~~~~~~----------------~--~~~~~~~~~~--~~~~~~ 349 (507)
T 1coy_A 301 MKAQGH--------LPNL--SSQVGEGWGNNGNI-MVGRANHM----------------W--DATGSKQATI--PTMGID 349 (507)
T ss_dssp HHHTTS--------STTS--CTTTTCCBBCTTEE-EEEEECCT----------------T--SCCCSCCCSS--CCEEEE
T ss_pred cccCCC--------CCcc--ChhhCCccccCCcc-cccccccc----------------c--ccccccCCCc--ceEEEe
Confidence 99 883 3311 23 99999999975 22211000 0 1233332111 111221
Q ss_pred eccCCCCCCCCCeeEEecCCcccccccCcccCCCCCCCCCCCCCcEEEEEeecccCCccEEEccCCCCCCCCCeeccCCC
Q psy7389 462 KTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPILLKPKSRGYIQLNATDPLWGPPLIFPKFF 541 (731)
Q Consensus 462 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~srg~V~l~~~d~~~~~p~i~~~y~ 541 (731)
..... ..|+++... + +. ..+ ...++++..+.+|.++|+|+|+++|+ .|+++|+
T Consensus 350 ~~~~~---~~~~~~~~~-~--~~-----------~~~-----~~~~~~~~~~~~p~s~G~V~L~s~~~-----~i~~~~~ 402 (507)
T 1coy_A 350 NWADP---TAPIFAEIA-P--LP-----------AGL-----ETYVSLYLAITKNPERARFQFNSGTG-----KVDLTWA 402 (507)
T ss_dssp CTTCT---TSCEEEEEE-C--CC-----------CSS-----CCCEEEEEEEECCCCCBCEEEETTTT-----EEEECCC
T ss_pred ccCCC---CCCcEEEec-c--CC-----------HHH-----hhheeeeEEEeeeCCCcEEEEccCCC-----ceeeccC
Confidence 11111 234444332 1 10 001 13445556678899999999987654 7899999
Q ss_pred CChhHHHHHHhcchHHHHH-HHHHhhhhcccCCCCCCccccccccccccccccccccchhhhhhhhhhccccceeccccc
Q psy7389 542 TKKPDLDVFVADDLKPWIK-AIVKKDIVDMWNSIPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLF 620 (731)
Q Consensus 542 ~~~~D~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (731)
.++ | ..++++ ++ .++ ++ ...... - +..
T Consensus 403 ~~~-D-~~~~~~-----~~~~~~------------------~i-----~~~~~~-~------------~~~--------- 430 (507)
T 1coy_A 403 QSQ-N-QKGIDM-----AKKVFD------------------KI-----NQKEGT-I------------YRT--------- 430 (507)
T ss_dssp GGG-G-HHHHHH-----HHHHHH------------------HH-----HHHHTC-C------------BCS---------
T ss_pred CCC-c-HHHHHH-----HHHHHH------------------HH-----HhhcCC-c------------ccC---------
Confidence 999 8 456666 55 555 55 211100 0 000
Q ss_pred ccCCCCccCCCCcccccccccccCCCHHHHHHHHHhhcCcccccccccccCCCCCCCCccCCCCeEeccCCeEEeecCCC
Q psy7389 621 KKLPPPICQCGSVLTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGVQNLRVVDASIM 700 (731)
Q Consensus 621 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~GTcrMG~~d~~~~VVD~~~rV~g~~nL~V~DaSv~ 700 (731)
+... +++ ++| ...+++|++|||||| +|||++|||||++||||||+|||
T Consensus 431 -----~~~~----------------~d~--~~~---~~~~~~H~~GTcrMG------~VVD~~~rV~Gv~nLrVvDaSv~ 478 (507)
T 1coy_A 431 -----DLFG----------------VYY--KTW---GDDFTYHPLGGVLLN------KATDNFGRLPEYPGLYVVDGSLV 478 (507)
T ss_dssp -----SCC------------------CC--CSS---BCSEESCCBCSSCTT------TTSCTTSBCTTSTTEEECSGGGS
T ss_pred -----cccc----------------cch--hhh---cccccccccCCcchh------heECCCCeEeccCCeEEeechhc
Confidence 0000 000 011 345789999999999 49999999999999999999999
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHHHhhh
Q psy7389 701 PKIVRGNTNAPTIMIAEKAADMIKEDW 727 (731)
Q Consensus 701 P~~~~~NP~lTi~AlA~r~A~~I~~~~ 727 (731)
|+++++||++||||||+|+||+|+++.
T Consensus 479 P~~~~~Np~~ti~alAeraAd~I~~~~ 505 (507)
T 1coy_A 479 PGNVGVNPFVTITALAERNMDKIISSD 505 (507)
T ss_dssp CSCCSSCSHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCcChHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999764
No 11
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=100.00 E-value=9.7e-45 Score=419.50 Aligned_cols=486 Identities=16% Similarity=0.152 Sum_probs=292.1
Q ss_pred CCCCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCCCCccCCCCccc------------------ccc-------
Q psy7389 113 DGDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVPGLAP------------------LIS------- 167 (731)
Q Consensus 113 ~~~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~~~~~~~p~~~~------------------~~~------- 167 (731)
.|..+|||||||||.+|+++|..|+++ |++|+|||++........-+.... ...
T Consensus 42 ~~~~~~dvvIIG~G~aGl~aA~~l~~~-G~~V~liE~~~~~gg~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~l~~ 120 (623)
T 3pl8_A 42 GMDIKYDVVIVGSGPIGCTYARELVGA-GYKVAMFDIGEIDSGLKIGAHKKNTVEYQKNIDKFVNVIQGQLMSVSVPVNT 120 (623)
T ss_dssp ----CEEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCCCSSSSTTCCTTCSHHHHHSGGGTHHHHHHTCEESCCCCCC
T ss_pred cccccCCEEEECCcHHHHHHHHHHHhC-CCcEEEEeccCCCCCcccccccccccCCCccHHHHHHHHHHhhhhccccccc
Confidence 455689999999999999999999998 999999999875431100000000 000
Q ss_pred -----CCCCCCCcccCCCcccccc--CC-CCeeEeecceeeechhhhhcceeecCCHhhHHHHHHcCCCCC---ChhhHH
Q psy7389 168 -----RSNIDWNYMTMPDPHACKA--RP-NGRCYWARGKVMGGSSTINYMIYARGNAEDYDEWEAMGNEGW---GYDEVL 236 (731)
Q Consensus 168 -----~~~~~w~~~~~~~~~~~~~--~~-~~~~~~~~g~~lGG~S~~n~~~~~r~~~~d~~~w~~~g~~~w---~~~~l~ 236 (731)
.....|..........+.. .. ..--....+..+||.+.+|.+...|..+.+. + .-...| .+.++.
T Consensus 121 ~~~~~~~~~~~~~~~v~l~~g~~~~~~~~~~l~~~~~~~~vGG~~~~~~g~~~r~~~~e~--~--~~l~~~~v~~~~~l~ 196 (623)
T 3pl8_A 121 LVVDTLSPTSWQASTFFVRNGSNPEQDPLRNLSGQAVTRVVGGMSTAWTCATPRFDREQR--P--LLVKDDADADDAEWD 196 (623)
T ss_dssp CCCCCSCTTSCCCSSCCSCTTCCTTCCTTSCCTTCEECCSTTGGGGTCCCBCCCCCGGGS--C--CSSTTCHHHHHHHHH
T ss_pred cccccccccccccCcEEeccCCCcccccchhhhhhcccccccCcceeeccccccCChHHh--h--hhhcccCccChhhHH
Confidence 0000111100000000000 00 0000112456688999999998888776420 1 011223 356778
Q ss_pred HHHHHhhcCCCcccccCCCCCCCCCCceeeecCCCCCChH-HHHHHHHHHcCCCCCC---CCC---CCCCCccccCCChh
Q psy7389 237 EYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNL-PVLIKAWKEKGYPERD---LNA---ENQVGGFICGDSTN 309 (731)
Q Consensus 237 ~~~~~~e~~~~~~~~~~~~~~~g~~G~l~~~~~~~~~~~~-~~~~~~~~~~G~~~~~---~~~---~~~~G~~r~~~s~~ 309 (731)
++|+..+.++.... +. +..... ......+......... +.. .....+.|+ ++.
T Consensus 197 ~~~~~~~~l~~vgg-----------~~-------~~~~~~~~~~~~~l~~~~~~~~~~~~~p~a~~~~~~~~~r~--s~~ 256 (623)
T 3pl8_A 197 RLYTKAESYFQTGT-----------DQ-------FKESIRHNLVLNKLTEEYKGQRDFQQIPLAATRRSPTFVEW--SSA 256 (623)
T ss_dssp HHHHHHHHHHTEES-----------CT-------TTTCHHHHHHHHHHHHHTTTTSCCEECCEEEEEEETTEEEE--CCH
T ss_pred HHHHHHHHhccccc-----------cc-------ccCccccccchHHHHHhhhhcccccccchhhccCCCCcccc--chH
Confidence 88888877655421 00 111111 1111222221111000 000 001122466 677
Q ss_pred hhccHhh------HhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEe--CCEEEEEEeccEEEecccCCCchHHH
Q psy7389 310 GAFIRPI------RKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINSPKIL 381 (731)
Q Consensus 310 ~~~L~~a------~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~--~g~~~~i~A~k~VVLAAGai~Tp~LL 381 (731)
.++|..+ .+ ++|++|++++.|++|+.+++++ +++||++.+ +++..++.|+ +||||+|++.||+||
T Consensus 257 ~~~l~~~~~l~~~~~-~~nv~v~~~~~V~~i~~~~~~~-----~v~GV~~~~~~~g~~~~i~A~-~VIlaaG~~~s~~lL 329 (623)
T 3pl8_A 257 NTVFDLQNRPNTDAP-EERFNLFPAVACERVVRNALNS-----EIESLHIHDLISGDRFEIKAD-VYVLTAGAVHNTQLL 329 (623)
T ss_dssp HHHCCCCCEEETTEE-EEEEEEECSEEEEEEEECTTSS-----CEEEEEEEETTTCCEEEECEE-EEEECSCTTHHHHHH
T ss_pred Hhhhhhhhcchhhcc-CCCEEEEeCCEEEEEEEECCCC-----EEEEEEEEEcCCCcEEEEECC-EEEEcCCCcCCHHHH
Confidence 7777765 55 6799999999999999975445 799999986 5777889998 899999999999999
Q ss_pred hhcCCCCcccccccCccceeecC-ccccccccccCceEEEEecCCcchhhhh-hh-------------------------
Q psy7389 382 MLSGIGPKDHLTSLNIKTLVDLK-VGHNLQDHLTSDGIVIAFPKTATDRMYK-KK------------------------- 434 (731)
Q Consensus 382 l~SGig~~~~l~~~gi~~~~~~p-VG~nL~dH~~~~~~~~~~~~~~~~~~~~-~~------------------------- 434 (731)
++||||+...|+..||++ ++| ||+||+||+.. .+.+.+++++.+.+.+ ..
T Consensus 330 ~~sgiG~~~~l~~~~i~~--~l~~vG~nl~dh~~~-~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~p~~~~~p 406 (623)
T 3pl8_A 330 VNSGFGQLGRPNPANPPE--LLPSLGSYITEQSLV-FCQTVMSTELIDSVKSDMTIRGTPGELTYSVTYTPGASTNKHPD 406 (623)
T ss_dssp HTTTSSCCSSCCTTSCCS--SCTTTTBSCBCCCEE-EEEEEECHHHHHHHTTTCEEESCTTSTTCEEECCTTCTTCSSCH
T ss_pred HhcCCCccccccccCCCC--CCcccccchhhCcCc-eEEEEECCcccccccccccccccCCCcceecccccCcccccCCc
Confidence 999999999999999999 999 99999999998 7778776542221110 00
Q ss_pred --HHhHHHHHHcC-CCCCCCC-CccceeEEEeccCCCCCCCCCeeEEecCCcccccccCcccCCCCCCCC-CCCCCcEEE
Q psy7389 435 --VSDAFEYKESR-CGPLAST-GPLQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSP-FAYYDGITV 509 (731)
Q Consensus 435 --~~~~~~~~~~~-~G~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 509 (731)
...+.+++... .+++... ...+-..+ .+... ..| ++.... +..+.+ ..+.+ ......+.+
T Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~-~~~~~~---------~~~~~~-~~~~~~~~~~~~~~~ 471 (623)
T 3pl8_A 407 WWNEKVKNHMMQHQEDPLPIPFEDPEPQVT--TLFQP--SHP-WHTQIH---------RDAFSY-GAVQQSIDSRLIVDW 471 (623)
T ss_dssp HHHHHHHHHHHHCTTCCCSSCTTCCCCEEE--CCCBT--TBC-EEEEEE---------CCSCCC-SCCCCSSCGGGEEEE
T ss_pred hhhhhhhhhhhccccccccccccccccccc--ccccc--cCc-chhhhh---------hhhccc-cccccccccceEEEE
Confidence 00001111111 2222100 00000000 00000 011 111110 000000 00111 111112222
Q ss_pred E-EeecccCCccEEEccC--CCCCCCCCeeccCCCCChh-HHHHHHhcchHHHHHHHHHhhhhcccCCCCCCcccccccc
Q psy7389 510 R-PILLKPKSRGYIQLNA--TDPLWGPPLIFPKFFTKKP-DLDVFVADDLKPWIKAIVKKDIVDMWNSIPPSNKLKRIKP 585 (731)
Q Consensus 510 ~-~~~~~p~srg~V~l~~--~d~~~~~p~i~~~y~~~~~-D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 585 (731)
. .....|.++|+|+|++ +|+ ++.|.++++|..++. |++.+.++ ++.++ ++
T Consensus 472 ~~~~e~~p~~~n~v~L~~~~~D~-~g~P~~~~~~~~~~~~d~~~~~~~-----~~~~~------------------~~-- 525 (623)
T 3pl8_A 472 RFFGRTEPKEENKLWFSDKITDA-YNMPQPTFDFRFPAGRTSKEAEDM-----MTDMC------------------VM-- 525 (623)
T ss_dssp EEEECCCCCTTCEEEEEEEEECT-TSSEEEEEECCCCTTHHHHHHHHH-----HHHHH------------------HH--
T ss_pred EEEEeeccCCCCEEEECCCCcCC-CCCceEEEEEeCCcHHHHHHHHHH-----HHHHH------------------HH--
Confidence 2 2345599999999987 799 999999999999999 99998888 77777 65
Q ss_pred ccccccccccccchhhhhhhhhhccccceecccccccCCCCccCCCCcccccccccccCCCHHHHHHHHHhhcCcccccc
Q psy7389 586 TVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQCGSVLTDLNKVFYKFGTWDYWACIAMQFTGTIQHPV 665 (731)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~ 665 (731)
. .. +|+.. + ...+.. ....+++|++
T Consensus 526 ---~-----~~------------~g~~~------~--~~~~~~---------------------------~~~~~~~H~~ 550 (623)
T 3pl8_A 526 ---S-----AK------------IGGFL------P--GSLPQF---------------------------MEPGLVLHLG 550 (623)
T ss_dssp ---H-----TT------------TEEEC------T--TSCSEE---------------------------CCTTTTCCCB
T ss_pred ---H-----Hh------------cCCcc------c--Cchhhc---------------------------cCCCCcccCC
Confidence 2 22 22201 0 000000 0124579999
Q ss_pred cccccCCCCCCCCcc-CCCCeEeccCCeEEeecCCCCCCCCCCcHHHHHHHHHHHHHHHHhhhcc
Q psy7389 666 GTCKMGPKDDPGSVV-DARLRVHGVQNLRVVDASIMPKIVRGNTNAPTIMIAEKAADMIKEDWIL 729 (731)
Q Consensus 666 GTcrMG~~d~~~~VV-D~~~rV~g~~nL~V~DaSv~P~~~~~NP~lTi~AlA~r~A~~I~~~~~~ 729 (731)
||||||.+++.+||| |++|||||++||||+|+|+||+++++||++||||||+|+|++|+++++.
T Consensus 551 gt~~mg~~~~~~~vvvd~~~~~~~~~~l~v~d~s~~p~~~~~np~~t~~a~a~r~a~~i~~~~~~ 615 (623)
T 3pl8_A 551 GTHRMGFDEKEDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCEYIKQNFTP 615 (623)
T ss_dssp CTTCBCSSTTTTTCSBCTTCBBTTCSSEEECSGGGCCSCCCSCCHHHHHHHHHHHHHHHHHHCCC
T ss_pred CceeCCCCCCCCeeEECCCCCEecCCCeEEecCCccCCCCCcChHHHHHHHHHHHHHHHHHHhhc
Confidence 999999854788998 9999999999999999999999999999999999999999999999865
No 12
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.52 E-value=2.8e-13 Score=153.41 Aligned_cols=68 Identities=13% Similarity=0.110 Sum_probs=53.3
Q ss_pred hhhhccHhhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEeCCEEEEEEeccEEEecccCCC-chHHHh
Q psy7389 308 TNGAFIRPIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAIN-SPKILM 382 (731)
Q Consensus 308 ~~~~~L~~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~~g~~~~i~A~k~VVLAAGai~-Tp~LLl 382 (731)
.....|.+.+. +.|++|++++.|++|+.+++ + +++||.+..+++..+|+|+|.||||+|++. ++.+|.
T Consensus 203 ~l~~~L~~~~~-~~Gv~i~~~t~v~~L~~~~~-g-----~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~~n~~m~~ 271 (510)
T 4at0_A 203 MLMKPLVETAE-KLGVRAEYDMRVQTLVTDDT-G-----RVVGIVAKQYGKEVAVRARRGVVLATGSFAYNDKMIE 271 (510)
T ss_dssp HHHHHHHHHHH-HTTCEEECSEEEEEEEECTT-C-----CEEEEEEEETTEEEEEEEEEEEEECCCCCTTCHHHHH
T ss_pred HHHHHHHHHHH-HcCCEEEecCEeEEEEECCC-C-----cEEEEEEEECCcEEEEEeCCeEEEeCCChhhCHHHHH
Confidence 34444555555 57999999999999998743 4 799999988888889999547999999998 555554
No 13
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.28 E-value=5.4e-11 Score=136.54 Aligned_cols=62 Identities=13% Similarity=0.134 Sum_probs=48.5
Q ss_pred hhccHhhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEe-CCEEEEEEeccEEEecccCCCchH
Q psy7389 310 GAFIRPIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFY-KKKLRRARAKKEVISSAGAINSPK 379 (731)
Q Consensus 310 ~~~L~~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~-~g~~~~i~A~k~VVLAAGai~Tp~ 379 (731)
...|...+. +.|++|++++.|++|+.+++ + +++||.+.. ++...+|+|+ .||||+|++...+
T Consensus 258 ~~~L~~~~~-~~gv~i~~~~~v~~l~~~~~-g-----~v~Gv~~~~~~g~~~~i~a~-~VVlAtGg~~~n~ 320 (571)
T 1y0p_A 258 VQVLYDNAV-KRNIDLRMNTRGIEVLKDDK-G-----TVKGILVKGMYKGYYWVKAD-AVILATGGFAKNN 320 (571)
T ss_dssp HHHHHHHHH-HTTCEEESSEEEEEEEECTT-S-----CEEEEEEEETTTEEEEEECS-EEEECCCCCTTCH
T ss_pred HHHHHHHHH-hcCCEEEeCCEeeEeEEcCC-C-----eEEEEEEEeCCCcEEEEECC-eEEEeCCCcccCH
Confidence 334555555 57999999999999998742 4 789999886 6777789998 5999999987533
No 14
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.28 E-value=4.1e-11 Score=137.30 Aligned_cols=63 Identities=13% Similarity=0.170 Sum_probs=48.8
Q ss_pred hccHhhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEe-CCEEEEEEeccEEEecccCCCchHHH
Q psy7389 311 AFIRPIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFY-KKKLRRARAKKEVISSAGAINSPKIL 381 (731)
Q Consensus 311 ~~L~~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~-~g~~~~i~A~k~VVLAAGai~Tp~LL 381 (731)
..|...+. +.|++|++++.|++|+.+++ + +++||.+.. +++..+|+|+ .||||+|++...+-|
T Consensus 254 ~~L~~~~~-~~gv~i~~~~~v~~l~~~~~-g-----~v~Gv~~~~~~g~~~~i~A~-~VVlAtGg~s~~~~~ 317 (566)
T 1qo8_A 254 DTLRKAAK-EQGIDTRLNSRVVKLVVNDD-H-----SVVGAVVHGKHTGYYMIGAK-SVVLATGGYGMNKEM 317 (566)
T ss_dssp HHHHHHHH-HTTCCEECSEEEEEEEECTT-S-----BEEEEEEEETTTEEEEEEEE-EEEECCCCCTTCHHH
T ss_pred HHHHHHHH-hcCCEEEeCCEEEEEEECCC-C-----cEEEEEEEeCCCcEEEEEcC-EEEEecCCcccCHHH
Confidence 34545555 57999999999999998742 4 789999875 6777789997 699999999864433
No 15
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.25 E-value=3.8e-12 Score=137.18 Aligned_cols=65 Identities=11% Similarity=0.086 Sum_probs=46.1
Q ss_pred ccHhhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEeCCEEEEEEeccEEEecccCCCchHHHhhc-CCC
Q psy7389 312 FIRPIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLS-GIG 387 (731)
Q Consensus 312 ~L~~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~~g~~~~i~A~k~VVLAAGai~Tp~LLl~S-Gig 387 (731)
.|...+. +.|++|++++.|++|..++++ +..|.. .++...+++|+ .||+|+|+ +|..|+... |+.
T Consensus 155 ~l~~~~~-~~Gv~i~~~~~v~~i~~~~~~-------~~~v~~-~~g~~~~~~a~-~VV~A~G~-~s~~l~~~~~g~~ 220 (369)
T 3dme_A 155 AYQGDAE-SDGAQLVFHTPLIAGRVRPEG-------GFELDF-GGAEPMTLSCR-VLINAAGL-HAPGLARRIEGIP 220 (369)
T ss_dssp HHHHHHH-HTTCEEECSCCEEEEEECTTS-------SEEEEE-CTTSCEEEEEE-EEEECCGG-GHHHHHHTEETSC
T ss_pred HHHHHHH-HCCCEEECCCEEEEEEEcCCc-------eEEEEE-CCCceeEEEeC-EEEECCCc-chHHHHHHhcCCC
Confidence 3444555 579999999999999987432 123443 34444579998 59999997 588888776 653
No 16
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.21 E-value=1.9e-11 Score=132.45 Aligned_cols=193 Identities=18% Similarity=0.119 Sum_probs=106.4
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCCCCccCCCCccccccCCCCCCCcccCCCccccccCCCCeeEee
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVPGLAPLISRSNIDWNYMTMPDPHACKARPNGRCYWA 195 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~~~~~~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 195 (731)
.++||||||+|++|+++|++|+ + |++|+|||+++..
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La-~-G~~V~vlE~~~~~------------------------------------------ 43 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS-A-HGRVVVLEREAQP------------------------------------------ 43 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT-T-TSCEEEECSSSST------------------------------------------
T ss_pred CcCCEEEECCcHHHHHHHHHHh-C-CCCEEEEECCCCc------------------------------------------
Confidence 3799999999999999999999 6 9999999998411
Q ss_pred cceeeechhhhhcceeecCC-HhhHHHHHHcCCCCCChhhHHHHHHHhhcCCCcccccCCCCCCCCCCceeeecCCCCCC
Q psy7389 196 RGKVMGGSSTINYMIYARGN-AEDYDEWEAMGNEGWGYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADK 274 (731)
Q Consensus 196 ~g~~lGG~S~~n~~~~~r~~-~~d~~~w~~~g~~~w~~~~l~~~~~~~e~~~~~~~~~~~~~~~g~~G~l~~~~~~~~~~ 274 (731)
.+|+|..+++.+.... ...+..+.. .-...|++.++.+. ++......|.+.+.... ...
T Consensus 44 ----g~~as~~~~g~~~~~~~~~~~~~l~~---------~~~~~~~~~~~~~~------~~~~~~~~g~l~~~~~~-~~~ 103 (381)
T 3nyc_A 44 ----GYHSTGRSAAHYTVAYGTPQVRALTA---------ASRAFFDNPPAGFC------EHPLLSPRPEMVVDFSD-DPE 103 (381)
T ss_dssp ----TSSGGGSCCCEECSSSSCHHHHHHHH---------HHHHHHHSCCTTSC------SSCSEEECCEEEECSSC-CHH
T ss_pred ----cccccccccceeecccCCHHHHHHHH---------HHHHHHHHhhhhhC------CcccccccceEEEechH-HHH
Confidence 1234444444433221 122222211 11233333332211 11111135666555432 222
Q ss_pred hHHHHHHHHHHcCCCCCCCC------------CCCCCCc---cccC---CChhhhccHhhHhcCCCeEEEcCcEEEEEEe
Q psy7389 275 NLPVLIKAWKEKGYPERDLN------------AENQVGG---FICG---DSTNGAFIRPIRKKRKNLTILTEAHVTRIIF 336 (731)
Q Consensus 275 ~~~~~~~~~~~~G~~~~~~~------------~~~~~G~---~r~~---~s~~~~~L~~a~~~~~g~~i~~~t~V~~I~~ 336 (731)
......+.+++.|++...+. .....+. ...+ .......|...+. +.|++|++++.|++|..
T Consensus 104 ~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~-~~Gv~i~~~~~V~~i~~ 182 (381)
T 3nyc_A 104 ELRRQYESGKALVPQMRLLDAEQACSIVPVLRRDKVFGATYDPTGADIDTDALHQGYLRGIR-RNQGQVLCNHEALEIRR 182 (381)
T ss_dssp HHHHHHHHHHHHCTTCEEECHHHHHHHSTTBCGGGCCCEEEETTCEEECHHHHHHHHHHHHH-HTTCEEESSCCCCEEEE
T ss_pred HHHHHHHHHHHcCCCcEEeCHHHHHHhCCCcccccceEEEEcCCCceECHHHHHHHHHHHHH-HCCCEEEcCCEEEEEEE
Confidence 33445555666676542211 1101111 0000 0122233444444 57999999999999998
Q ss_pred cCCCCCCCceEEEEEEEEeCCEEEEEEeccEEEecccCCCchHHHhhcCCC
Q psy7389 337 DKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIG 387 (731)
Q Consensus 337 ~~~g~~~~~~r~~GV~~~~~g~~~~i~A~k~VVLAAGai~Tp~LLl~SGig 387 (731)
++ + + .+|.+ .+. +++|+ .||+|+|+ +|+.|+...|+.
T Consensus 183 ~~--~-----~-~~V~t--~~g--~i~a~-~VV~A~G~-~s~~l~~~~g~~ 219 (381)
T 3nyc_A 183 VD--G-----A-WEVRC--DAG--SYRAA-VLVNAAGA-WCDAIAGLAGVR 219 (381)
T ss_dssp ET--T-----E-EEEEC--SSE--EEEES-EEEECCGG-GHHHHHHHHTCC
T ss_pred eC--C-----e-EEEEe--CCC--EEEcC-EEEECCCh-hHHHHHHHhCCC
Confidence 63 3 3 34432 222 78998 59999996 688887766653
No 17
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.20 E-value=2.1e-11 Score=133.39 Aligned_cols=35 Identities=34% Similarity=0.477 Sum_probs=33.2
Q ss_pred CcccEEEECCChhHHHHHHHHhh-cCC-CeEEEEecCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSE-IKK-WKVLLLEAGI 151 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~-~~G-~~VlVLEaG~ 151 (731)
.++||||||||++|+++|++|++ + | ++|+|||++.
T Consensus 20 ~~~dVvIIG~G~~Gl~~A~~La~~~-G~~~V~vlE~~~ 56 (405)
T 2gag_B 20 KSYDAIIVGGGGHGLATAYFLAKNH-GITNVAVLEKGW 56 (405)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHHH-CCCCEEEECSSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHhc-CCCcEEEEeCCC
Confidence 47999999999999999999999 9 9 9999999985
No 18
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.19 E-value=3.1e-11 Score=131.05 Aligned_cols=36 Identities=22% Similarity=0.404 Sum_probs=33.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 115 ~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
..++||||||+|++|+++|++|+++ |++|+|||++.
T Consensus 3 ~~~~dVvIIGgGi~Gl~~A~~La~~-G~~V~lle~~~ 38 (382)
T 1y56_B 3 PEKSEIVVIGGGIVGVTIAHELAKR-GEEVTVIEKRF 38 (382)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 4579999999999999999999999 99999999973
No 19
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.15 E-value=5.6e-10 Score=128.15 Aligned_cols=57 Identities=9% Similarity=0.145 Sum_probs=44.2
Q ss_pred cHhhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEe--CCEEEEEEeccEEEecccCCCc
Q psy7389 313 IRPIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINS 377 (731)
Q Consensus 313 L~~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~--~g~~~~i~A~k~VVLAAGai~T 377 (731)
|...+. +.|++|++++.|++|+.+++ + +++||.+.+ ++...+|+|+ .||||+|++..
T Consensus 149 L~~~~~-~~gv~i~~~~~v~~L~~~~~-g-----~v~Gv~~~~~~~g~~~~i~A~-~VVlAtGg~~~ 207 (588)
T 2wdq_A 149 LYQQNL-KNHTTIFSEWYALDLVKNQD-G-----AVVGCTALCIETGEVVYFKAR-ATVLATGGAGR 207 (588)
T ss_dssp HHHHHH-HTTCEEEETEEEEEEEECTT-S-----CEEEEEEEETTTCCEEEEEEE-EEEECCCCCGG
T ss_pred HHHHHH-hCCCEEEeCcEEEEEEECCC-C-----EEEEEEEEEcCCCeEEEEEcC-EEEECCCCCcc
Confidence 444444 46999999999999998632 3 788998874 5666789998 69999998754
No 20
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.13 E-value=1.2e-09 Score=125.55 Aligned_cols=56 Identities=14% Similarity=0.237 Sum_probs=45.3
Q ss_pred cHhhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEe--CCEEEEEEeccEEEecccCCCc
Q psy7389 313 IRPIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINS 377 (731)
Q Consensus 313 L~~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~--~g~~~~i~A~k~VVLAAGai~T 377 (731)
|...+. +.|++|++++.|++|+.++ + +++||.+.+ ++....|+|+ .||||+|++..
T Consensus 161 L~~~~~-~~gv~i~~~~~v~~Li~~~--g-----~v~Gv~~~~~~~G~~~~i~A~-~VVlATGG~~~ 218 (621)
T 2h88_A 161 LYGRSL-RYDTSYFVEYFALDLLMEN--G-----ECRGVIALCIEDGTIHRFRAK-NTVIATGGYGR 218 (621)
T ss_dssp HHHHHT-TSCCEEEETEEEEEEEEET--T-----EEEEEEEEETTTCCEEEEEEE-EEEECCCCCGG
T ss_pred HHHHHH-hCCCEEEEceEEEEEEEEC--C-----EEEEEEEEEcCCCcEEEEEcC-eEEECCCcccc
Confidence 444455 6899999999999999863 4 899998874 5666789998 69999998764
No 21
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.12 E-value=8.2e-10 Score=120.56 Aligned_cols=35 Identities=29% Similarity=0.536 Sum_probs=33.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.++||||||+|++|+++|+.||++ |++|+||||+.
T Consensus 3 ~~~DVvIIGaG~~Gl~~A~~La~~-G~~V~vlE~~~ 37 (397)
T 2oln_A 3 ESYDVVVVGGGPVGLATAWQVAER-GHRVLVLERHT 37 (397)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 469999999999999999999999 99999999985
No 22
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.11 E-value=9.3e-10 Score=126.09 Aligned_cols=64 Identities=16% Similarity=0.131 Sum_probs=48.6
Q ss_pred hccHhhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEe-CCEEEEEEeccEEEecccCCCc-hHHHh
Q psy7389 311 AFIRPIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFY-KKKLRRARAKKEVISSAGAINS-PKILM 382 (731)
Q Consensus 311 ~~L~~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~-~g~~~~i~A~k~VVLAAGai~T-p~LLl 382 (731)
..|...+. +.|++|++++.|++|+.+++ + +++||.+.. ++...+|+|+ .||||+|++.. +.++.
T Consensus 259 ~~L~~~~~-~~gv~i~~~t~v~~l~~~~~-g-----~v~GV~~~~~~G~~~~i~A~-~VVlAtGg~~~~~~~~~ 324 (572)
T 1d4d_A 259 QVLWDNAV-KRGTDIRLNSRVVRILEDAS-G-----KVTGVLVKGEYTGYYVIKAD-AVVIAAGGFAKNNERVS 324 (572)
T ss_dssp HHHHHHHH-HTTCEEESSEEEEEEEEC---C-----CEEEEEEEETTTEEEEEECS-EEEECCCCCTTCHHHHH
T ss_pred HHHHHHHH-HcCCeEEecCEEEEEEECCC-C-----eEEEEEEEeCCCcEEEEEcC-EEEEeCCCCccCHHHHH
Confidence 34555555 57999999999999987642 4 788999885 6777789997 69999999874 45543
No 23
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.10 E-value=8.2e-10 Score=127.92 Aligned_cols=56 Identities=9% Similarity=0.048 Sum_probs=44.2
Q ss_pred cHhhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEe--CCEEEEEEeccEEEecccCCCc
Q psy7389 313 IRPIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINS 377 (731)
Q Consensus 313 L~~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~--~g~~~~i~A~k~VVLAAGai~T 377 (731)
|...+. +.|++|++++.|++|+.++ + +++||.+.+ ++....++|+ .||||+|++..
T Consensus 164 L~~~a~-~~gv~i~~~~~v~~L~~~~--g-----~v~Gv~~~~~~~G~~~~i~A~-~VVlATGG~~~ 221 (660)
T 2bs2_A 164 VANECL-KLGVSIQDRKEAIALIHQD--G-----KCYGAVVRDLVTGDIIAYVAK-GTLIATGGYGR 221 (660)
T ss_dssp HHHHHH-HHTCEEECSEEEEEEEEET--T-----EEEEEEEEETTTCCEEEEECS-EEEECCCCCGG
T ss_pred HHHHHH-hCCCEEEECcEEEEEEecC--C-----EEEEEEEEECCCCcEEEEEcC-EEEEccCcchh
Confidence 444444 4699999999999999863 4 899998864 5666789998 69999998754
No 24
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.10 E-value=1.1e-09 Score=124.57 Aligned_cols=59 Identities=14% Similarity=0.227 Sum_probs=44.7
Q ss_pred cHhhHhcCCCeEEEcCcEEEEEEecCCC-----CCCCceEEEEEEEEe--CCEEEEEEeccEEEecccCCCc
Q psy7389 313 IRPIRKKRKNLTILTEAHVTRIIFDKTP-----NKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINS 377 (731)
Q Consensus 313 L~~a~~~~~g~~i~~~t~V~~I~~~~~g-----~~~~~~r~~GV~~~~--~g~~~~i~A~k~VVLAAGai~T 377 (731)
|...+.+..|++|++++.|++|+.++++ + ++.||.+.+ +++..+++|+ .||||+|++..
T Consensus 144 L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~-----~v~Gv~~~~~~~G~~~~i~A~-~VVlAtGg~~~ 209 (540)
T 1chu_A 144 LVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTR-----RVVGAWVWNRNKETVETCHAK-AVVLATGGASK 209 (540)
T ss_dssp CHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSC-----BEEEEEEEETTTTEEEEEECS-EEEECCCCCGG
T ss_pred HHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCC-----EEEEEEEEEcCCCcEEEEEcC-eEEECCCCccc
Confidence 4444441379999999999999984322 2 588998875 6777789998 69999998653
No 25
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.09 E-value=6.4e-10 Score=127.05 Aligned_cols=65 Identities=17% Similarity=0.098 Sum_probs=52.1
Q ss_pred cHhhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEe--CCEEEEEEeccEEEecccCCCchHHHhhcCCC
Q psy7389 313 IRPIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINSPKILMLSGIG 387 (731)
Q Consensus 313 L~~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~--~g~~~~i~A~k~VVLAAGai~Tp~LLl~SGig 387 (731)
|...+. +.|++|+++++|++|..++ + ++.||.+.+ ++...+|+|+ .||+|+|+ ++..|+...|+.
T Consensus 176 L~~~a~-~~G~~i~~~~~V~~l~~~~--g-----~v~gV~~~d~~tg~~~~i~A~-~VV~AaG~-~s~~l~~~~g~~ 242 (561)
T 3da1_A 176 IMKEAV-ARGAVALNYMKVESFIYDQ--G-----KVVGVVAKDRLTDTTHTIYAK-KVVNAAGP-WVDTLREKDRSK 242 (561)
T ss_dssp HHHHHH-HTTCEEEESEEEEEEEEET--T-----EEEEEEEEETTTCCEEEEEEE-EEEECCGG-GHHHHHHTTTCC
T ss_pred HHHHHH-HcCCEEEcCCEEEEEEEcC--C-----eEEEEEEEEcCCCceEEEECC-EEEECCCc-chHHHHHhcCCC
Confidence 333444 5799999999999999873 4 788999886 5666789998 69999996 688888887765
No 26
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.08 E-value=4e-10 Score=124.82 Aligned_cols=36 Identities=25% Similarity=0.355 Sum_probs=33.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhcCCC-eEEEEecCC
Q psy7389 115 DMTFDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (731)
Q Consensus 115 ~~~~DvIIVGsG~aG~~aA~~LA~~~G~-~VlVLEaG~ 151 (731)
..++||||||||++|+++|++||++ |+ +|+|||++.
T Consensus 4 ~~~~dVvIIGgG~aGlsaA~~La~~-G~~~V~vlE~~~ 40 (438)
T 3dje_A 4 TKSSSLLIVGAGTWGTSTALHLARR-GYTNVTVLDPYP 40 (438)
T ss_dssp CTTSCEEEECCSHHHHHHHHHHHHT-TCCCEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHc-CCCcEEEEeCCC
Confidence 4579999999999999999999999 99 999999985
No 27
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.06 E-value=2.4e-10 Score=136.99 Aligned_cols=194 Identities=22% Similarity=0.211 Sum_probs=106.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCC-eEEEEecCCCCCCccCCCCccccccCCCCCCCcccCCCccccccCCCCeeEe
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGIEEPFFADVPGLAPLISRSNIDWNYMTMPDPHACKARPNGRCYW 194 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~-~VlVLEaG~~~~~~~~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 194 (731)
.++||||||||++|+++|++|+++ |. +|+|||++...
T Consensus 3 ~~~dVvIIGgGi~Gls~A~~La~~-G~~~V~vlE~~~~~----------------------------------------- 40 (830)
T 1pj5_A 3 STPRIVIIGAGIVGTNLADELVTR-GWNNITVLDQGPLN----------------------------------------- 40 (830)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHT-TCCCEEEECSSCTT-----------------------------------------
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC-CCCcEEEEeCCCCC-----------------------------------------
Confidence 479999999999999999999999 98 99999998410
Q ss_pred ecceeeechhhhhcceeecCCH-hhHHHHHHcCCCCCChhhHHHHHHHhhcCCCcccccCCCCCCCCCCceeeecCCCCC
Q psy7389 195 ARGKVMGGSSTINYMIYARGNA-EDYDEWEAMGNEGWGYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYAD 273 (731)
Q Consensus 195 ~~g~~lGG~S~~n~~~~~r~~~-~d~~~w~~~g~~~w~~~~l~~~~~~~e~~~~~~~~~~~~~~~g~~G~l~~~~~~~~~ 273 (731)
..||+|..+.+.+..... ..+..+.. .-...|.+.+.. . ...++ ..|.+.+...+...
T Consensus 41 ----~~~gss~~~~G~~~~~~~~~~~~~l~~---------~s~~~~~~l~~~-~------~~~~~-~~G~l~~~~~~~~~ 99 (830)
T 1pj5_A 41 ----MPGGSTSHAPGLVFQTNPSKTMASFAK---------YTVEKLLSLTED-G------VSCFN-QVGGLEVATTETRL 99 (830)
T ss_dssp ----CCCSGGGTCCCEECCCCSCHHHHHHHH---------HHHHHHHHCEET-T------EESEE-CCCEEEEESSHHHH
T ss_pred ----CCcccceeCCceeecCCCCHHHHHHHH---------HHHHHHHHHHhh-C------CCCee-ecCcEEEEeCHHHH
Confidence 013444444444332221 11111111 112334443321 0 01122 45666555332211
Q ss_pred ChHHHHHHHHHHcCCCCCCCCC------------CCCCCc--c-ccC---CChhhhccHhhHhcCCCeEEEcCcEEEEEE
Q psy7389 274 KNLPVLIKAWKEKGYPERDLNA------------ENQVGG--F-ICG---DSTNGAFIRPIRKKRKNLTILTEAHVTRII 335 (731)
Q Consensus 274 ~~~~~~~~~~~~~G~~~~~~~~------------~~~~G~--~-r~~---~s~~~~~L~~a~~~~~g~~i~~~t~V~~I~ 335 (731)
.......+.+++.|++...++. ....+. . ..+ .......|...+. +.|++|++++.|++|.
T Consensus 100 ~~l~~~~~~~~~~G~~~~~l~~~e~~~~~p~l~~~~~~gg~~~~~~g~v~p~~l~~~L~~~a~-~~Gv~i~~~t~V~~i~ 178 (830)
T 1pj5_A 100 ADLKRKLGYAAAWGIEGRLLSPAECQELYPLLDGENILGGLHVPSDGLASAARAVQLLIKRTE-SAGVTYRGSTTVTGIE 178 (830)
T ss_dssp HHHHHHHHHHHHHTCCCEEECHHHHHHHCTTSCGGGCCEEEEETTCEEECHHHHHHHHHHHHH-HTTCEEECSCCEEEEE
T ss_pred HHHHHHHHHHHHcCCCeEEECHHHHHHhCccCCccceEEEEEECCCceEcHHHHHHHHHHHHH-HcCCEEECCceEEEEE
Confidence 2222333445566665421111 001110 0 000 0122333444555 5799999999999999
Q ss_pred ecCCCCCCCceEEEEEEEEeCCEEEEEEeccEEEecccCCCchHHHhhcCC
Q psy7389 336 FDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGI 386 (731)
Q Consensus 336 ~~~~g~~~~~~r~~GV~~~~~g~~~~i~A~k~VVLAAGai~Tp~LLl~SGi 386 (731)
.++ + ++++|.+. ++ +|+|+ .||+|+|+ +++.|+...|+
T Consensus 179 ~~~--~-----~v~~V~t~-~G---~i~Ad-~VV~AaG~-~s~~l~~~~g~ 216 (830)
T 1pj5_A 179 QSG--G-----RVTGVQTA-DG---VIPAD-IVVSCAGF-WGAKIGAMIGM 216 (830)
T ss_dssp EET--T-----EEEEEEET-TE---EEECS-EEEECCGG-GHHHHHHTTTC
T ss_pred EeC--C-----EEEEEEEC-Cc---EEECC-EEEECCcc-chHHHHHHhCC
Confidence 863 3 67677542 22 69998 59999997 57888776665
No 28
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.04 E-value=8.9e-10 Score=119.70 Aligned_cols=34 Identities=38% Similarity=0.528 Sum_probs=32.6
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
+|||||||+|++|+++|++|+++ |++|+|||++.
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~-G~~V~vie~~~ 36 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQ-GVKTLLVDAFD 36 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCC
Confidence 69999999999999999999999 99999999985
No 29
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.04 E-value=3.6e-10 Score=129.35 Aligned_cols=59 Identities=14% Similarity=0.164 Sum_probs=47.5
Q ss_pred CCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEe--CCEEEEEEeccEEEecccCCCchHHHhhcCCC
Q psy7389 320 RKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINSPKILMLSGIG 387 (731)
Q Consensus 320 ~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~--~g~~~~i~A~k~VVLAAGai~Tp~LLl~SGig 387 (731)
+.|++|+++++|++|+.++ + ++.||.+.+ ++...+|+|+ .||+|||+ ++..|+...|+.
T Consensus 200 ~~Ga~i~~~t~V~~l~~~~--~-----~v~gV~~~d~~tg~~~~i~A~-~VV~AaG~-ws~~l~~~~g~~ 260 (571)
T 2rgh_A 200 EDGAYLVSKMKAVGFLYEG--D-----QIVGVKARDLLTDEVIEIKAK-LVINTSGP-WVDKVRNLNFTR 260 (571)
T ss_dssp HTTCEEESSEEEEEEEEET--T-----EEEEEEEEETTTCCEEEEEBS-CEEECCGG-GHHHHHTTCCSS
T ss_pred HcCCeEEeccEEEEEEEeC--C-----EEEEEEEEEcCCCCEEEEEcC-EEEECCCh-hHHHHHHhhccC
Confidence 5799999999999999873 4 788998875 4555689998 59999997 588887766543
No 30
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.03 E-value=2.3e-10 Score=127.22 Aligned_cols=34 Identities=35% Similarity=0.596 Sum_probs=32.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCC-CeEEEEecC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKK-WKVLLLEAG 150 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G-~~VlVLEaG 150 (731)
.++||||||+|.+|+++|++|+++ | .+|+|||+.
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~-G~~~V~vlE~~ 56 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVW-SGGSVLVVDAG 56 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHH-HCSCEEEEESS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC-CCCcEEEEccC
Confidence 479999999999999999999999 9 999999993
No 31
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.01 E-value=8.1e-10 Score=127.89 Aligned_cols=50 Identities=16% Similarity=0.316 Sum_probs=41.1
Q ss_pred CeEEEcCcEEEEEEecCC-CCCCCceEEEEEEEEe--CCEEEEEEeccEEEecccCCCc
Q psy7389 322 NLTILTEAHVTRIIFDKT-PNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINS 377 (731)
Q Consensus 322 g~~i~~~t~V~~I~~~~~-g~~~~~~r~~GV~~~~--~g~~~~i~A~k~VVLAAGai~T 377 (731)
|++|+.++.|++|+.+++ ++ +++||.+.+ ++....|+|+ .||||||++..
T Consensus 182 gV~i~~~~~v~dLi~~~~~~g-----~v~Gv~~~~~~~g~~~~i~Ak-~VVLATGG~g~ 234 (662)
T 3gyx_A 182 QDRIIERIFIVKLLLDKNTPN-----RIAGAVGFNLRANEVHIFKAN-AMVVACGGAVN 234 (662)
T ss_dssp TTTEECSEEECCCEECSSSTT-----BEEEEEEEESSSSCEEEEECS-EEEECCCCBCS
T ss_pred CcEEEEceEEEEEEEeCCccc-----eEEEEEEEEcCCCcEEEEEeC-EEEECCCcccc
Confidence 999999999999998753 13 789998764 5667789998 69999998763
No 32
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.01 E-value=2.9e-10 Score=123.30 Aligned_cols=38 Identities=24% Similarity=0.418 Sum_probs=34.1
Q ss_pred CCCCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 113 DGDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 113 ~~~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
..+.+|||||||||++|+++|++|+++ |++|+|||++.
T Consensus 13 ~~~~~~dvvIIGgG~~Gl~~A~~La~~-G~~V~llE~~~ 50 (382)
T 1ryi_A 13 AMKRHYEAVVIGGGIIGSAIAYYLAKE-NKNTALFESGT 50 (382)
T ss_dssp -CCSEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHhC-CCcEEEEeCCC
Confidence 344579999999999999999999998 99999999974
No 33
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.00 E-value=9.6e-10 Score=128.68 Aligned_cols=35 Identities=31% Similarity=0.373 Sum_probs=32.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
..+||||||||.+|+++|++|+++ |++|+|||+..
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~-G~~V~vlEk~~ 305 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRR-GWQVTLYCADE 305 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 459999999999999999999999 99999999974
No 34
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.00 E-value=3.6e-09 Score=122.74 Aligned_cols=60 Identities=20% Similarity=0.207 Sum_probs=44.8
Q ss_pred hccHhhHhcCC-Ce-EEEcCcEEEEEEecCCC-CCCCceEEEEEEEEe--CCEEEEEEeccEEEecccCCCc
Q psy7389 311 AFIRPIRKKRK-NL-TILTEAHVTRIIFDKTP-NKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINS 377 (731)
Q Consensus 311 ~~L~~a~~~~~-g~-~i~~~t~V~~I~~~~~g-~~~~~~r~~GV~~~~--~g~~~~i~A~k~VVLAAGai~T 377 (731)
..|..++. +. |+ +|++++.|++|+.++++ + +++||.+.. ++....|+|+ .||||+|++..
T Consensus 155 ~~l~~~~~-~~~gv~~i~~~~~v~~L~~~~~~~g-----~v~Gv~~~~~~~g~~~~i~A~-~VVlAtGG~~~ 219 (643)
T 1jnr_A 155 PIIAEAAK-MAVGEENIYERVFIFELLKDNNDPN-----AVAGAVGFSVREPKFYVFKAK-AVILATGGATL 219 (643)
T ss_dssp HHHHHHHH-HHHCGGGEECSEEEEEEEECTTCTT-----BEEEEEEEESSSSCEEEEECS-EEEECCCCBCS
T ss_pred HHHHHHHH-hcCCCcEEEecCEEEEEEEcCCccc-----eeEEEEEEEecCCcEEEEEcC-EEEECCCcccc
Confidence 34444444 44 89 99999999999987431 3 688998753 5666689997 69999999765
No 35
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.99 E-value=1.4e-08 Score=116.85 Aligned_cols=57 Identities=16% Similarity=0.204 Sum_probs=44.1
Q ss_pred cHhhHhcCCC-eEEEcCcEEEEEEecCCCCCCCceEEEEEEEEe--CCEEEEEEeccEEEecccCCCch
Q psy7389 313 IRPIRKKRKN-LTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINSP 378 (731)
Q Consensus 313 L~~a~~~~~g-~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~--~g~~~~i~A~k~VVLAAGai~Tp 378 (731)
|...+. +.| ++|++++.|++|+.++ + +++||.+.+ ++...+|+|+ .||||+|++...
T Consensus 140 L~~~~~-~~gnv~i~~~~~v~~l~~~~--g-----~v~Gv~~~~~~~G~~~~i~A~-~VVlAtGg~s~~ 199 (602)
T 1kf6_A 140 LFQTSL-QFPQIQRFDEHFVLDILVDD--G-----HVRGLVAMNMMEGTLVQIRAN-AVVMATGGAGRV 199 (602)
T ss_dssp HHHHHT-TCTTEEEEETEEEEEEEEET--T-----EEEEEEEEETTTTEEEEEECS-CEEECCCCCGGG
T ss_pred HHHHHH-hCCCcEEEeCCEEEEEEEeC--C-----EEEEEEEEEcCCCcEEEEEcC-eEEECCCCCccc
Confidence 444444 455 9999999999999873 4 899998764 5766789998 599999987644
No 36
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.94 E-value=8e-10 Score=129.56 Aligned_cols=35 Identities=29% Similarity=0.183 Sum_probs=33.0
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.++||||||||.+|+++|++|+++ |++|+|||++.
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~-G~~V~vlEk~~ 297 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRR-GAVVTLYCADA 297 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTT-TCCEEEEESSS
T ss_pred CCCCEEEECCcHHHHHHHHHHHHC-CCcEEEEeCCC
Confidence 469999999999999999999999 99999999974
No 37
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.94 E-value=1.1e-09 Score=120.31 Aligned_cols=36 Identities=31% Similarity=0.427 Sum_probs=32.2
Q ss_pred CCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 115 ~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
..+|||||||+|++|+++|..|+++ |.+|+|||+++
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~-G~~V~llEk~~ 60 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKR-GRRVLVIDHAR 60 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC-CCcEEEEeCCC
Confidence 4579999999999999999999999 99999999986
No 38
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.94 E-value=1.3e-09 Score=117.66 Aligned_cols=34 Identities=32% Similarity=0.567 Sum_probs=32.5
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
+|||||||+|++|+++|++|+++ |++|+|||++.
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~-G~~V~vle~~~ 35 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRA-GLNVLMTDAHM 35 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHT-TCCEEEECSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCeEEEEecCC
Confidence 58999999999999999999999 99999999985
No 39
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.94 E-value=3.3e-09 Score=117.80 Aligned_cols=34 Identities=38% Similarity=0.573 Sum_probs=32.5
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
+|||||||+|++|+++|..|+++ |.+|+|||+.+
T Consensus 26 ~~dVvIIGgG~aGl~aA~~la~~-G~~V~llEk~~ 59 (447)
T 2i0z_A 26 HYDVIVIGGGPSGLMAAIGAAEE-GANVLLLDKGN 59 (447)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHHC-CCCEEEEECCC
Confidence 59999999999999999999998 99999999985
No 40
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.90 E-value=5.7e-09 Score=117.66 Aligned_cols=59 Identities=17% Similarity=0.053 Sum_probs=44.7
Q ss_pred cHhhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEe--CCEEEEEEeccEEEecccCCCchHHHh
Q psy7389 313 IRPIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINSPKILM 382 (731)
Q Consensus 313 L~~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~--~g~~~~i~A~k~VVLAAGai~Tp~LLl 382 (731)
|...+. +.|++|+++++|++|..++ ++.+|.+.+ +|...+|+|+ .||+|+|+ ++..|+.
T Consensus 155 l~~~a~-~~Gv~i~~~~~V~~l~~~~--------~~~~V~~~d~~~G~~~~i~A~-~VV~AtG~-~s~~l~~ 215 (501)
T 2qcu_A 155 NAQMVV-RKGGEVLTRTRATSARREN--------GLWIVEAEDIDTGKKYSWQAR-GLVNATGP-WVKQFFD 215 (501)
T ss_dssp HHHHHH-HTTCEEECSEEEEEEEEET--------TEEEEEEEETTTCCEEEEEES-CEEECCGG-GHHHHHH
T ss_pred HHHHHH-HcCCEEEcCcEEEEEEEeC--------CEEEEEEEECCCCCEEEEECC-EEEECCCh-hHHHHHH
Confidence 334444 5799999999999999763 356787764 5666789998 59999997 5777765
No 41
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.82 E-value=1e-08 Score=111.17 Aligned_cols=60 Identities=13% Similarity=0.194 Sum_probs=45.4
Q ss_pred hhhccHhhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEeCCEEEEEEeccEEEecccCCCch
Q psy7389 309 NGAFIRPIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSP 378 (731)
Q Consensus 309 ~~~~L~~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~~g~~~~i~A~k~VVLAAGai~Tp 378 (731)
...+|...+. ..|++++.++.|+.+..++ + ++++|....++...+++|+ .||.|.|+ .|.
T Consensus 104 ~~~~L~~~a~-~~G~~~~~~~~v~~~~~~~--~-----~~~~v~~~~~~~~~~~~a~-~vIgAdG~-~S~ 163 (397)
T 3oz2_A 104 FDKHLAALAA-KAGADVWVKSPALGVIKEN--G-----KVAGAKIRHNNEIVDVRAK-MVIAADGF-ESE 163 (397)
T ss_dssp HHHHHHHHHH-HHTCEEESSCCEEEEEEET--T-----EEEEEEEEETTEEEEEEEE-EEEECCCT-TCH
T ss_pred HHHHHHHHHH-hcCcEEeeeeeeeeeeecc--c-----eeeeeeecccccceEEEEe-EEEeCCcc-ccH
Confidence 3444555555 5799999999999998874 4 7888888888888899997 57666664 553
No 42
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.81 E-value=7.3e-09 Score=117.11 Aligned_cols=35 Identities=26% Similarity=0.433 Sum_probs=33.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
..+||||||+|++|+++|+.|++. |++|+|||++.
T Consensus 106 ~~~DVVIVGgGpaGL~aA~~La~~-G~kV~VlEr~~ 140 (549)
T 3nlc_A 106 LTERPIVIGFGPCGLFAGLVLAQM-GFNPIIVERGK 140 (549)
T ss_dssp CCCCCEEECCSHHHHHHHHHHHHT-TCCCEEECSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCeEEEEEccC
Confidence 368999999999999999999998 99999999985
No 43
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.79 E-value=1.4e-08 Score=110.99 Aligned_cols=35 Identities=34% Similarity=0.474 Sum_probs=33.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.+|||||||+|++|+++|.+|+++ |.+|+|||+++
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~-G~~V~vlEk~~ 37 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKL-GKSVTVFDNGK 37 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CCCCEEEECCcHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence 369999999999999999999999 99999999985
No 44
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.77 E-value=1.4e-08 Score=105.52 Aligned_cols=36 Identities=31% Similarity=0.490 Sum_probs=32.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.+|||||||+|++|+++|..|++.+|.+|+|||+.+
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~ 73 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSV 73 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 368999999999999999999994499999999985
No 45
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.76 E-value=1.4e-08 Score=114.35 Aligned_cols=62 Identities=15% Similarity=0.084 Sum_probs=41.4
Q ss_pred hhhccHhhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEeCCEEEEEEeccEEEecccCCCchHHHh
Q psy7389 309 NGAFIRPIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILM 382 (731)
Q Consensus 309 ~~~~L~~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~~g~~~~i~A~k~VVLAAGai~Tp~LLl 382 (731)
....|.+.++ +.|++|+++++|++|+.++ + +++||++.++. ++.|+ .||++++...+.+.|+
T Consensus 223 l~~aL~~~~~-~~Gg~I~~~~~V~~I~~~~--~-----~~~gV~~~~g~---~~~ad-~VV~~a~~~~~~~~Ll 284 (501)
T 4dgk_A 223 LVQGMIKLFQ-DLGGEVVLNARVSHMETTG--N-----KIEAVHLEDGR---RFLTQ-AVASNADVVHTYRDLL 284 (501)
T ss_dssp HHHHHHHHHH-HTTCEEECSCCEEEEEEET--T-----EEEEEEETTSC---EEECS-CEEECCC---------
T ss_pred hHHHHHHHHH-HhCCceeeecceeEEEeeC--C-----eEEEEEecCCc---EEEcC-EEEECCCHHHHHHHhc
Confidence 3334555555 6899999999999999984 4 89999876542 68898 5999999888877665
No 46
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.75 E-value=6e-08 Score=108.35 Aligned_cols=31 Identities=32% Similarity=0.329 Sum_probs=30.3
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
||||||||++|+++|.+|+++ |++|+|||++
T Consensus 1 DVvVIG~G~AGl~aA~~la~~-G~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRA-GKKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHC-CCCEEEEeCC
Confidence 899999999999999999998 9999999997
No 47
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.73 E-value=1.6e-07 Score=99.16 Aligned_cols=36 Identities=36% Similarity=0.612 Sum_probs=33.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhc-CCCeEEEEecCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEI-KKWKVLLLEAGI 151 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~-~G~~VlVLEaG~ 151 (731)
.+|||||||+|++|+++|+.|+++ +|++|+|||++.
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~ 114 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGV 114 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSS
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCC
Confidence 369999999999999999999995 699999999985
No 48
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.73 E-value=3.9e-08 Score=106.90 Aligned_cols=69 Identities=13% Similarity=0.179 Sum_probs=50.0
Q ss_pred hhhccHhhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEeCCEEEEEEeccEEEecccCCCchHHHhhcCCCC
Q psy7389 309 NGAFIRPIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGP 388 (731)
Q Consensus 309 ~~~~L~~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~~g~~~~i~A~k~VVLAAGai~Tp~LLl~SGig~ 388 (731)
...+|...+. +.|++|+.+++|++|..++ + +++||.+...+...+++|+ .||.|+|.. | .+....|+..
T Consensus 104 l~~~L~~~~~-~~gv~i~~~~~v~~i~~~~--~-----~v~gv~~~~~~~~~~~~a~-~vV~A~G~~-s-~~~~~~g~~~ 172 (397)
T 3cgv_A 104 FDKHLAALAA-KAGADVWVKSPALGVIKEN--G-----KVAGAKIRHNNEIVDVRAK-MVIAADGFE-S-EFGRWAGLKS 172 (397)
T ss_dssp HHHHHHHHHH-HHTCEEESSCCEEEEEEET--T-----EEEEEEEEETTEEEEEEEE-EEEECCCTT-C-HHHHHHTCCT
T ss_pred HHHHHHHHHH-hCCCEEEECCEEEEEEEeC--C-----EEEEEEEEECCeEEEEEcC-EEEECCCcc-h-HhHHhcCCCc
Confidence 3444555555 5799999999999999873 4 7888988776666789998 699999964 4 4434445443
No 49
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.68 E-value=2e-08 Score=110.42 Aligned_cols=60 Identities=17% Similarity=0.167 Sum_probs=45.5
Q ss_pred hhccHhhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEeCCEEEEEEeccEEEecccCCCchHHHh
Q psy7389 310 GAFIRPIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILM 382 (731)
Q Consensus 310 ~~~L~~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~~g~~~~i~A~k~VVLAAGai~Tp~LLl 382 (731)
...|.+.+. +.|++|++++.|++|..++ + +++||.+ ++. ++.|+ .||+|+++..+.+||.
T Consensus 199 ~~~l~~~~~-~~G~~i~~~~~V~~i~~~~--~-----~~~gv~~--~g~--~~~ad-~VV~a~~~~~~~~ll~ 258 (425)
T 3ka7_A 199 IDALETVIS-ANGGKIHTGQEVSKILIEN--G-----KAAGIIA--DDR--IHDAD-LVISNLGHAATAVLCS 258 (425)
T ss_dssp HHHHHHHHH-HTTCEEECSCCEEEEEEET--T-----EEEEEEE--TTE--EEECS-EEEECSCHHHHHHHTT
T ss_pred HHHHHHHHH-HcCCEEEECCceeEEEEEC--C-----EEEEEEE--CCE--EEECC-EEEECCCHHHHHHhcC
Confidence 333555555 5799999999999999873 4 7888865 343 68998 6999999888877654
No 50
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.57 E-value=2.3e-07 Score=106.23 Aligned_cols=57 Identities=12% Similarity=0.107 Sum_probs=43.7
Q ss_pred hhhccHhhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEeCCEEEEEEeccEEEecccC
Q psy7389 309 NGAFIRPIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGA 374 (731)
Q Consensus 309 ~~~~L~~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~~g~~~~i~A~k~VVLAAGa 374 (731)
...+|...+. +.|++|+.++.|++|..++ + .+.+|.+..+|...+++|+ .||.|+|.
T Consensus 130 l~~~L~~~a~-~~Gv~i~~g~~V~~v~~~~--g-----~~~~V~~~~~G~~~~i~Ad-lVV~AdG~ 186 (591)
T 3i3l_A 130 FDKLLLDEAR-SRGITVHEETPVTDVDLSD--P-----DRVVLTVRRGGESVTVESD-FVIDAGGS 186 (591)
T ss_dssp HHHHHHHHHH-HTTCEEETTCCEEEEECCS--T-----TCEEEEEEETTEEEEEEES-EEEECCGG
T ss_pred HHHHHHHHHH-hCCCEEEeCCEEEEEEEcC--C-----CEEEEEEecCCceEEEEcC-EEEECCCC
Confidence 4444655555 5899999999999999763 2 3567777767776789998 69999996
No 51
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.56 E-value=5.6e-08 Score=108.07 Aligned_cols=58 Identities=16% Similarity=0.198 Sum_probs=44.5
Q ss_pred hccHhhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEe--CCEEEEEEeccEEEecccCCCc
Q psy7389 311 AFIRPIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINS 377 (731)
Q Consensus 311 ~~L~~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~--~g~~~~i~A~k~VVLAAGai~T 377 (731)
..|.+.+. +.|++|+.++.|++|..++ + +++||.+.. +|...+++|+ .||.|+|+...
T Consensus 104 ~~L~~~a~-~~gv~i~~~~~v~~i~~~~--~-----~v~gv~~~~~~~G~~~~~~ad-~VV~AdG~~s~ 163 (453)
T 3atr_A 104 QRVLKEAQ-DRGVEIWDLTTAMKPIFED--G-----YVKGAVLFNRRTNEELTVYSK-VVVEATGYSRS 163 (453)
T ss_dssp HHHHHHHH-HTTCEEESSEEEEEEEEET--T-----EEEEEEEEETTTTEEEEEECS-EEEECCGGGCT
T ss_pred HHHHHHHH-HcCCEEEeCcEEEEEEEEC--C-----EEEEEEEEEcCCCceEEEEcC-EEEECcCCchh
Confidence 33555554 5799999999999998763 4 788888875 5666789998 69999997543
No 52
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.52 E-value=3.1e-07 Score=103.76 Aligned_cols=59 Identities=15% Similarity=0.214 Sum_probs=45.4
Q ss_pred hhhccHhhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEe-CCEEEEEEeccEEEecccCCC
Q psy7389 309 NGAFIRPIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFY-KKKLRRARAKKEVISSAGAIN 376 (731)
Q Consensus 309 ~~~~L~~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~-~g~~~~i~A~k~VVLAAGai~ 376 (731)
+..+|...+. +.|++|+.++.|++|..++ + +++||.+.. +|...+++|+ .||+|+|...
T Consensus 113 l~~~L~~~a~-~~Gv~i~~~~~V~~v~~~~--~-----~v~gv~~~~~dG~~~~i~ad-~VI~AdG~~S 172 (512)
T 3e1t_A 113 FDDMLLRNSE-RKGVDVRERHEVIDVLFEG--E-----RAVGVRYRNTEGVELMAHAR-FIVDASGNRT 172 (512)
T ss_dssp HHHHHHHHHH-HTTCEEESSCEEEEEEEET--T-----EEEEEEEECSSSCEEEEEEE-EEEECCCTTC
T ss_pred HHHHHHHHHH-hCCCEEEcCCEEEEEEEEC--C-----EEEEEEEEeCCCCEEEEEcC-EEEECCCcch
Confidence 3445655555 5799999999999999863 4 788888875 4555689998 6999999744
No 53
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.50 E-value=1.3e-07 Score=103.60 Aligned_cols=35 Identities=37% Similarity=0.608 Sum_probs=32.6
Q ss_pred cccEEEECCChhHHHHHHHHhhc-CCCeEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEI-KKWKVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~-~G~~VlVLEaG~ 151 (731)
++||||||+|++|+++|+.|+++ ||++|+|||++.
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~ 71 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGG 71 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSC
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 69999999999999999999996 599999999974
No 54
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.49 E-value=2.2e-07 Score=97.59 Aligned_cols=36 Identities=33% Similarity=0.497 Sum_probs=33.0
Q ss_pred CcccEEEECCChhHHHHHHHHhhc-CCCeEEEEecCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEI-KKWKVLLLEAGI 151 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~-~G~~VlVLEaG~ 151 (731)
.+|||+|||+|++|+++|..|+++ +|++|+|+|+.+
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~ 100 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSV 100 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSS
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCc
Confidence 478999999999999999999986 489999999985
No 55
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.48 E-value=7.4e-07 Score=97.69 Aligned_cols=34 Identities=35% Similarity=0.555 Sum_probs=32.6
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
+|||||||||++|+++|..|+++ |.+|+|||+..
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~-G~~V~v~E~~~ 38 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKS-GFKVKIVEKQK 38 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT-TCCEEEECSSC
T ss_pred cCcEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence 69999999999999999999999 99999999984
No 56
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.47 E-value=1.7e-07 Score=106.87 Aligned_cols=35 Identities=40% Similarity=0.528 Sum_probs=32.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.+|||||||||.+|+.+|..||+. |.+|+|||++.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~-G~kVlLIEk~~ 61 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARM-GQQTLLLTHNI 61 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESCG
T ss_pred CcCCEEEECChHHHHHHHHHHHhC-CCCEEEEeecc
Confidence 479999999999999999999998 99999999973
No 57
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.46 E-value=1.6e-07 Score=106.81 Aligned_cols=35 Identities=26% Similarity=0.358 Sum_probs=32.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.+|||||||||.+|+.+|..||+. |.+|+|||++.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~-G~kVlLIEk~~ 60 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARM-GAKTAMFVLNA 60 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHT-TCCEEEEESCG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCCEEEEEecc
Confidence 369999999999999999999999 99999999973
No 58
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.43 E-value=1e-06 Score=92.65 Aligned_cols=59 Identities=22% Similarity=0.296 Sum_probs=46.1
Q ss_pred CCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEe--CCEEEEEEeccEEEecccCCCchHHHhhcCC
Q psy7389 320 RKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINSPKILMLSGI 386 (731)
Q Consensus 320 ~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~--~g~~~~i~A~k~VVLAAGai~Tp~LLl~SGi 386 (731)
+.|++|++++.|++|..++ + ++.+|.+.. +|...++.++ .||+|+|...++.+|..+|+
T Consensus 202 ~~gv~i~~~~~v~~i~~~~--~-----~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~~~gl 262 (319)
T 3cty_A 202 KRNIPYIMNAQVTEIVGDG--K-----KVTGVKYKDRTTGEEKLIETD-GVFIYVGLIPQTSFLKDSGV 262 (319)
T ss_dssp HTTCCEECSEEEEEEEESS--S-----SEEEEEEEETTTCCEEEECCS-EEEECCCEEECCGGGTTSCC
T ss_pred cCCcEEEcCCeEEEEecCC--c-----eEEEEEEEEcCCCceEEEecC-EEEEeeCCccChHHHhhccc
Confidence 5799999999999998652 3 477888874 5666679998 69999997777777766655
No 59
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.42 E-value=2e-06 Score=96.68 Aligned_cols=39 Identities=31% Similarity=0.424 Sum_probs=34.7
Q ss_pred CCCCCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 112 QDGDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 112 ~~~~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
..++.++||||||+|++|+++|..|+++ |.+|+||||.+
T Consensus 6 ~~~~~~~dVlIVGaGpaGl~~A~~La~~-G~~v~vlE~~~ 44 (500)
T 2qa1_A 6 HHHRSDAAVIVVGAGPAGMMLAGELRLA-GVEVVVLERLV 44 (500)
T ss_dssp --CCSBCSEEEECCSHHHHHHHHHHHHT-TCCEEEEESCC
T ss_pred CCccCCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCC
Confidence 3456689999999999999999999999 99999999975
No 60
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.41 E-value=3.4e-07 Score=104.37 Aligned_cols=37 Identities=32% Similarity=0.624 Sum_probs=33.0
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 114 GDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 114 ~~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
...+|||||||||.+|+.+|..||+. |.+|+|||+..
T Consensus 18 ~~~~yDVIVIGgG~AGl~AAlaLAr~-G~kVlLIEk~~ 54 (641)
T 3cp8_A 18 GSHMYDVIVVGAGHAGCEAALAVARG-GLHCLLITSDL 54 (641)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESCG
T ss_pred ccCcCCEEEECccHHHHHHHHHHHHC-CCcEEEEEecc
Confidence 34479999999999999999999999 99999999873
No 61
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.39 E-value=8.1e-07 Score=101.80 Aligned_cols=72 Identities=10% Similarity=0.068 Sum_probs=49.0
Q ss_pred hhhhccHhhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEe-----CCEE-------EEEEeccEEEecccCC
Q psy7389 308 TNGAFIRPIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFY-----KKKL-------RRARAKKEVISSAGAI 375 (731)
Q Consensus 308 ~~~~~L~~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~-----~g~~-------~~i~A~k~VVLAAGai 375 (731)
.+..+|.+.+. +.|++|+.++.|++|+.+++ + +++||.+.+ +|.. .+++|+ .||+|.|+.
T Consensus 145 ~l~~~L~~~a~-~~Gv~i~~g~~v~~l~~~~~-g-----~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad-~VV~AdG~~ 216 (584)
T 2gmh_A 145 HLVSWMGEQAE-ALGVEVYPGYAAAEILFHED-G-----SVKGIATNDVGIQKDGAPKTTFERGLELHAK-VTIFAEGCH 216 (584)
T ss_dssp HHHHHHHHHHH-HTTCEEETTCCEEEEEECTT-S-----SEEEEEECCEEECTTSCEEEEEECCCEEECS-EEEECCCTT
T ss_pred HHHHHHHHHHH-HcCCEEEcCCEEEEEEEcCC-C-----CEEEEEeCCccccCCCCcccccCCceEEECC-EEEEeeCCC
Confidence 34445665555 56999999999999998753 3 577887653 3322 479998 699999986
Q ss_pred Cch--HHHhhcCCC
Q psy7389 376 NSP--KILMLSGIG 387 (731)
Q Consensus 376 ~Tp--~LLl~SGig 387 (731)
..- +|+...|+.
T Consensus 217 S~vr~~l~~~~gl~ 230 (584)
T 2gmh_A 217 GHLAKQLYKKFDLR 230 (584)
T ss_dssp CHHHHHHHHHTTTT
T ss_pred chHHHHHHHHhCCC
Confidence 642 343334553
No 62
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.38 E-value=7.5e-07 Score=89.49 Aligned_cols=34 Identities=29% Similarity=0.449 Sum_probs=32.4
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
+|||||||+|++|+.+|..|++. |.+|+|||++.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~-g~~v~lie~~~ 36 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQK-GVRVGLLTQSL 36 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCCEEEEESCG
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCCEEEEecCC
Confidence 69999999999999999999999 99999999973
No 63
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.35 E-value=5.5e-06 Score=93.93 Aligned_cols=35 Identities=29% Similarity=0.376 Sum_probs=33.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.++||||||+|++|+++|+.|+++ |.+|+||||.+
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~-G~~v~viEr~~ 38 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQ-GVRVLVVERRP 38 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTT-TCCEEEECSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCC
Confidence 379999999999999999999999 99999999985
No 64
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.31 E-value=3.3e-06 Score=94.86 Aligned_cols=36 Identities=33% Similarity=0.379 Sum_probs=33.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 115 ~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
+.++||||||+|++|+++|..|+++ |.+|+|||+.+
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~-G~~v~vlE~~~ 45 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLG-GVDVMVLEQLP 45 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCC
Confidence 3579999999999999999999999 99999999975
No 65
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.28 E-value=3e-06 Score=95.79 Aligned_cols=69 Identities=19% Similarity=0.224 Sum_probs=48.1
Q ss_pred hccHhhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEeCCEEEEEEeccEEEecccCCCchH-HHhhcCCC
Q psy7389 311 AFIRPIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPK-ILMLSGIG 387 (731)
Q Consensus 311 ~~L~~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~~g~~~~i~A~k~VVLAAGai~Tp~-LLl~SGig 387 (731)
..|...++ +.|++|++++.|++|..+++ + ++.++.+...+.+.++.|+ .||+|+|...+.. +|..+|+.
T Consensus 259 ~~l~~~l~-~~GV~i~~~~~V~~i~~~~~-~-----~v~~~~v~~~~G~~~i~aD-~Vv~A~G~~p~~~~~l~~~gl~ 328 (523)
T 1mo9_A 259 AYVLDRMK-EQGMEIISGSNVTRIEEDAN-G-----RVQAVVAMTPNGEMRIETD-FVFLGLGEQPRSAELAKILGLD 328 (523)
T ss_dssp HHHHHHHH-HTTCEEESSCEEEEEEECTT-S-----BEEEEEEEETTEEEEEECS-CEEECCCCEECCHHHHHHHTCC
T ss_pred HHHHHHHH-hCCcEEEECCEEEEEEEcCC-C-----ceEEEEEEECCCcEEEEcC-EEEECcCCccCCccCHHHcCCc
Confidence 34555555 68999999999999986532 2 4555554443332378999 5999999876666 67777764
No 66
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.27 E-value=4.8e-07 Score=91.47 Aligned_cols=34 Identities=32% Similarity=0.413 Sum_probs=32.5
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
++||+|||||++|+++|..|+++ |++|+||||.+
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~-G~~V~v~Ek~~ 35 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAA-GHQVHLFDKSR 35 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCC
Confidence 48999999999999999999999 99999999985
No 67
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.26 E-value=1.8e-06 Score=91.80 Aligned_cols=34 Identities=24% Similarity=0.414 Sum_probs=32.5
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.|||||||+|++|+++|..|++. |++|+|||+.+
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~-g~~v~vie~~~ 36 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRS-GLSYVILDAEA 36 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHS-SCCEEEECCSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCC
Confidence 69999999999999999999999 99999999985
No 68
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.26 E-value=8.7e-07 Score=94.38 Aligned_cols=33 Identities=21% Similarity=0.277 Sum_probs=31.4
Q ss_pred ccEEEECCChhHHHHHHHHhh---cCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSE---IKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~---~~G~~VlVLEaG~ 151 (731)
+||||||+|++|+++|+.|++ + |++|+||||++
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~-G~~V~v~Ek~~ 37 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSG-PLYLAVWDKAD 37 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-C-CEEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccC-CceEEEEECCC
Confidence 699999999999999999999 8 99999999985
No 69
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.25 E-value=1.3e-06 Score=95.76 Aligned_cols=67 Identities=18% Similarity=0.150 Sum_probs=50.9
Q ss_pred hhccHhhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEeCCEEEEEEeccEEEecccCCCchHHHhhcCCCC
Q psy7389 310 GAFIRPIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGP 388 (731)
Q Consensus 310 ~~~L~~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~~g~~~~i~A~k~VVLAAGai~Tp~LLl~SGig~ 388 (731)
..++....+ +.|++|++++.|++|..++ + ++++|.+.++ . ++.|+ .||+|+|...+..+|..+|+..
T Consensus 197 ~~~l~~~l~-~~GV~i~~~~~v~~i~~~~--~-----~v~~v~l~dG-~--~i~aD-~Vv~a~G~~p~~~l~~~~gl~~ 263 (415)
T 3lxd_A 197 SEFYQAEHR-AHGVDLRTGAAMDCIEGDG--T-----KVTGVRMQDG-S--VIPAD-IVIVGIGIVPCVGALISAGASG 263 (415)
T ss_dssp HHHHHHHHH-HTTCEEEETCCEEEEEESS--S-----BEEEEEESSS-C--EEECS-EEEECSCCEESCHHHHHTTCCC
T ss_pred HHHHHHHHH-hCCCEEEECCEEEEEEecC--C-----cEEEEEeCCC-C--EEEcC-EEEECCCCccChHHHHhCCCCc
Confidence 344555555 6899999999999998753 3 6777876543 2 68899 6999999887778888888753
No 70
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.25 E-value=4.2e-07 Score=102.15 Aligned_cols=35 Identities=29% Similarity=0.436 Sum_probs=33.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
..+||||||||++|+++|..|++. |.+|+|||+.+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~-G~~V~liEk~~ 125 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALL-GARVVLVEKRI 125 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCS
T ss_pred CCCCEEEECccHHHHHHHHHHHHC-CCeEEEEEecc
Confidence 479999999999999999999998 99999999985
No 71
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.23 E-value=5.1e-06 Score=94.82 Aligned_cols=35 Identities=31% Similarity=0.492 Sum_probs=31.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.+|||||||+|++|+++|+.|+++ |++|+|||+.+
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~-G~~V~VlEr~~ 82 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAG-GVGALVLEKLV 82 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHT-TCCEEEEBSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEcCCC
Confidence 369999999999999999999999 99999999985
No 72
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.19 E-value=1.2e-05 Score=93.16 Aligned_cols=37 Identities=27% Similarity=0.408 Sum_probs=34.2
Q ss_pred CCCcccEEEECCChhHHHHHHHHhh-cCCCeEEEEecCC
Q psy7389 114 GDMTFDFIIIGAGSAGCVLANRLSE-IKKWKVLLLEAGI 151 (731)
Q Consensus 114 ~~~~~DvIIVGsG~aG~~aA~~LA~-~~G~~VlVLEaG~ 151 (731)
+..++||||||+|++|+++|..|++ . |.+|+||||.+
T Consensus 29 ~~~~~dVlIVGaGpaGL~~A~~La~~~-G~~V~viEr~~ 66 (639)
T 2dkh_A 29 VPSQVDVLIVGCGPAGLTLAAQLAAFP-DIRTCIVEQKE 66 (639)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHTTCT-TSCEEEECSSS
T ss_pred CCCCCcEEEECcCHHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence 3457999999999999999999999 9 99999999975
No 73
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.16 E-value=5.5e-06 Score=94.10 Aligned_cols=36 Identities=28% Similarity=0.407 Sum_probs=33.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 115 ~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
..++||||||+|++|+++|.+|++. |.+|+|||+++
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~-G~~v~iiE~~~ 49 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLREL-GRSVHVIETAG 49 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence 3479999999999999999999999 99999999985
No 74
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.15 E-value=3.6e-06 Score=95.40 Aligned_cols=35 Identities=26% Similarity=0.395 Sum_probs=32.5
Q ss_pred CcccEEEECCChhHHHHHHHHh-hcCCCeEEEEecCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLS-EIKKWKVLLLEAGI 151 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA-~~~G~~VlVLEaG~ 151 (731)
.++||||||||++|+.+|.+|+ +. |.+|+|||+.+
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~-G~~v~viE~~~ 42 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHEL-GLTTVGFDKAD 42 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTT-CCCEEEEESSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcC-CCCEEEEECCC
Confidence 3699999999999999999999 77 99999999974
No 75
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.13 E-value=5e-06 Score=94.40 Aligned_cols=35 Identities=29% Similarity=0.470 Sum_probs=32.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.++||||||+|++|+.+|.+|++. |.+|+|||+++
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~-G~~v~iiE~~~ 54 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQ-GLTVRAFEAAS 54 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CCCCEEEECchHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence 479999999999999999999998 99999999974
No 76
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.10 E-value=1.3e-05 Score=89.13 Aligned_cols=35 Identities=31% Similarity=0.394 Sum_probs=33.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCC-----CeEEEEecCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKK-----WKVLLLEAGI 151 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G-----~~VlVLEaG~ 151 (731)
..|||||||+|++|+++|..|++. | .+|+|||+.+
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~-g~~~~~~~v~liE~~~ 68 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQER-AQAQGALEVLFLDKQG 68 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHH-HHHHCCCCEEEEESCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhc-ccccCcccEEEEecCC
Confidence 469999999999999999999999 8 9999999986
No 77
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.09 E-value=1.7e-06 Score=90.62 Aligned_cols=36 Identities=25% Similarity=0.334 Sum_probs=32.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 115 ~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.++|||||||||++|++||.+||++ |++|+|+|++.
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~-g~~v~lie~~~ 39 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRA-RKQIALFDNNT 39 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSC
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCC
Confidence 3479999999999999999999999 99999999874
No 78
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.07 E-value=9.2e-06 Score=88.63 Aligned_cols=67 Identities=12% Similarity=0.160 Sum_probs=51.0
Q ss_pred hhccHhhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEeCCEEEEEEeccEEEecccCCCchHHHhhcCCCC
Q psy7389 310 GAFIRPIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGP 388 (731)
Q Consensus 310 ~~~L~~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~~g~~~~i~A~k~VVLAAGai~Tp~LLl~SGig~ 388 (731)
..++....+ +.|++|++++.|++|..++ + ++.+|.+.++ . ++.|+ .||+|+|...+..+|..+|+..
T Consensus 187 ~~~l~~~l~-~~GV~i~~~~~v~~i~~~~--~-----~v~~V~~~dG-~--~i~aD-~Vv~a~G~~p~~~l~~~~gl~~ 253 (404)
T 3fg2_P 187 SSYFHDRHS-GAGIRMHYGVRATEIAAEG--D-----RVTGVVLSDG-N--TLPCD-LVVVGVGVIPNVEIAAAAGLPT 253 (404)
T ss_dssp HHHHHHHHH-HTTCEEECSCCEEEEEEET--T-----EEEEEEETTS-C--EEECS-EEEECCCEEECCHHHHHTTCCB
T ss_pred HHHHHHHHH-hCCcEEEECCEEEEEEecC--C-----cEEEEEeCCC-C--EEEcC-EEEECcCCccCHHHHHhCCCCC
Confidence 334555555 6899999999999998763 4 7778876543 2 68899 6999999877778888888753
No 79
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.06 E-value=2.2e-06 Score=89.95 Aligned_cols=34 Identities=44% Similarity=0.648 Sum_probs=32.5
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
+|||||||||++|+++|.+|++. |++|+|+|++.
T Consensus 6 ~yDvvIIG~GpAGl~aA~~l~~~-g~~V~liE~~~ 39 (312)
T 4gcm_A 6 DFDIAIIGAGPAGMTAAVYASRA-NLKTVMIERGI 39 (312)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCCEEEEecCC
Confidence 79999999999999999999999 99999999873
No 80
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.05 E-value=1.6e-05 Score=83.67 Aligned_cols=34 Identities=26% Similarity=0.276 Sum_probs=32.4
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.+||||||+|++|+++|..|++. |++|+|+|+.+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~ 40 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMR-QASVKIIESLP 40 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHHC-CCCEEEEEcCC
Confidence 58999999999999999999998 99999999974
No 81
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.05 E-value=3.2e-06 Score=90.66 Aligned_cols=34 Identities=38% Similarity=0.574 Sum_probs=32.3
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCC-eEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~-~VlVLEaG~ 151 (731)
++||||||+|++|+++|.+|++. |. +|+|||+.+
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~-g~~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDF-GITDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHc-CCCcEEEEecCC
Confidence 69999999999999999999998 99 999999974
No 82
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.03 E-value=2.3e-06 Score=89.56 Aligned_cols=37 Identities=27% Similarity=0.296 Sum_probs=33.6
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 114 GDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 114 ~~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
|.+.|||||||||++|+++|.+|++. |++|+|+|++.
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~~-g~~v~liE~~~ 37 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGRS-SLKPVMYEGFM 37 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHT-TCCCEEECCSS
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHC-CCCEEEEecCC
Confidence 44579999999999999999999999 99999999874
No 83
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.00 E-value=1e-05 Score=91.74 Aligned_cols=35 Identities=37% Similarity=0.470 Sum_probs=32.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.++||||||+|++|+.+|.+|++. |.+|+|||+++
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~-g~~v~iiE~~~ 42 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQA-GMKVLGIEAGE 42 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence 369999999999999999999998 99999999984
No 84
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.00 E-value=4e-06 Score=93.06 Aligned_cols=40 Identities=30% Similarity=0.432 Sum_probs=36.6
Q ss_pred CCCCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCC
Q psy7389 113 DGDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (731)
Q Consensus 113 ~~~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~ 153 (731)
.|+.++||||||||.+|+++|..|+++ |++|+||||.+..
T Consensus 7 ~~~~~~dvvVIGaG~~GL~aA~~La~~-G~~V~vlE~~~~~ 46 (453)
T 2bcg_G 7 TIDTDYDVIVLGTGITECILSGLLSVD-GKKVLHIDKQDHY 46 (453)
T ss_dssp CCCCBCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred hccccCCEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCCCC
Confidence 455689999999999999999999999 9999999998765
No 85
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.96 E-value=4e-06 Score=94.30 Aligned_cols=38 Identities=26% Similarity=0.445 Sum_probs=34.5
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEP 154 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~~ 154 (731)
.+||||||||++|+++|++|+++.|++|+|||+.+...
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~G 47 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPG 47 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCC
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCc
Confidence 79999999999999999999985499999999987653
No 86
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.95 E-value=2.3e-05 Score=87.10 Aligned_cols=68 Identities=13% Similarity=0.253 Sum_probs=45.5
Q ss_pred hccHhhHhcCCCeE--EEcCcEEEEEEecCCCCCCCceEEEEEEEEe--CCEEEEEEeccEEEecccCCCchHHHhhcCC
Q psy7389 311 AFIRPIRKKRKNLT--ILTEAHVTRIIFDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINSPKILMLSGI 386 (731)
Q Consensus 311 ~~L~~a~~~~~g~~--i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~--~g~~~~i~A~k~VVLAAGai~Tp~LLl~SGi 386 (731)
.||...++ +.|++ |+.++.|++|..+++++ . ..|.+.+ ++...++.++ .||+|+|.+..|++..--|+
T Consensus 105 ~~l~~~~~-~~gv~~~i~~~~~V~~v~~~~~~~-----~-~~V~~~~~~~g~~~~~~~d-~VVvAtG~~s~p~~p~ipG~ 176 (464)
T 2xve_A 105 DYIKGRVE-KAGVRKYIRFNTAVRHVEFNEDSQ-----T-FTVTVQDHTTDTIYSEEFD-YVVCCTGHFSTPYVPEFEGF 176 (464)
T ss_dssp HHHHHHHH-HHTCGGGEECSEEEEEEEEETTTT-----E-EEEEEEETTTTEEEEEEES-EEEECCCSSSSBCCCCCBTT
T ss_pred HHHHHHHH-HcCCcceEEeCCEEEEEEEcCCCC-----c-EEEEEEEcCCCceEEEEcC-EEEECCCCCCCCccCCCCCc
Confidence 34544444 45676 88999999998864322 2 2344444 3555678998 59999999888887643343
No 87
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=97.94 E-value=5.5e-06 Score=87.62 Aligned_cols=36 Identities=33% Similarity=0.497 Sum_probs=32.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhc-CCCeEEEEecCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEI-KKWKVLLLEAGI 151 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~-~G~~VlVLEaG~ 151 (731)
.++||||||||++|+++|++||++ .|++|+|+|+++
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~ 100 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSV 100 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 479999999999999999999863 499999999985
No 88
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.91 E-value=6.8e-06 Score=88.15 Aligned_cols=37 Identities=19% Similarity=0.268 Sum_probs=34.1
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 114 GDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 114 ~~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
|..++||||||+|.+|+++|++|+++ |++|+|||+..
T Consensus 3 m~~~~dVvVIG~Gi~Gls~A~~La~~-G~~V~vle~~~ 39 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIGLSSALILARK-GYSVHILARDL 39 (363)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSC
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhC-CCEEEEEeccC
Confidence 34579999999999999999999998 99999999974
No 89
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.88 E-value=7.9e-06 Score=89.15 Aligned_cols=39 Identities=26% Similarity=0.132 Sum_probs=32.9
Q ss_pred CCCCCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 112 QDGDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 112 ~~~~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
......|||||||+|++|+++|+.|+++ |++|+||||.+
T Consensus 18 ~~~~~~~dV~IVGaG~aGl~~A~~La~~-G~~V~v~E~~~ 56 (407)
T 3rp8_A 18 LYFQGHMKAIVIGAGIGGLSAAVALKQS-GIDCDVYEAVK 56 (407)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred ccCCCCCEEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence 3344579999999999999999999999 99999999985
No 90
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.84 E-value=9.9e-06 Score=89.64 Aligned_cols=41 Identities=29% Similarity=0.421 Sum_probs=36.7
Q ss_pred CCCCCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCC
Q psy7389 112 QDGDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (731)
Q Consensus 112 ~~~~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~ 153 (731)
..|.++|||||||+|.+|+++|..||++ |++|+||||++..
T Consensus 15 ~~~~~~~dv~iiG~G~~g~~~a~~l~~~-g~~v~~~e~~~~~ 55 (475)
T 3p1w_A 15 YFQGEHYDVIILGTGLKECILSGLLSHY-GKKILVLDRNPYY 55 (475)
T ss_dssp --CCCEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred ccccccCCEEEECCCHHHHHHHHHHHHC-CCcEEEEeccCCC
Confidence 3466789999999999999999999999 9999999999766
No 91
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.83 E-value=0.00011 Score=80.72 Aligned_cols=35 Identities=23% Similarity=0.284 Sum_probs=32.2
Q ss_pred ccEEEECCChhHHHHHHHHhh--cCCCeEEEEecCCCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSE--IKKWKVLLLEAGIEE 153 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~--~~G~~VlVLEaG~~~ 153 (731)
.||||||+|++|+++|.+|++ . |++|+|||+.+..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~-g~~Vtlie~~~~~ 39 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMP-DLKITLISDRPYF 39 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCT-TCEEEEECSSSEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCC-CCeEEEECCCCCC
Confidence 689999999999999999999 6 9999999998743
No 92
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.79 E-value=5.3e-05 Score=85.46 Aligned_cols=34 Identities=24% Similarity=0.367 Sum_probs=31.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhcCCCeEEEEec
Q psy7389 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEA 149 (731)
Q Consensus 115 ~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEa 149 (731)
...|||||||||++|+++|.+|++. |++|+|+|+
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~-G~~v~lie~ 243 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARK-GIRTGLMGE 243 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHT-TCCEEEECS
T ss_pred cCcccEEEECCcHHHHHHHHHHHhC-CCeEEEEEC
Confidence 3479999999999999999999998 999999986
No 93
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=97.78 E-value=1.2e-05 Score=88.31 Aligned_cols=35 Identities=40% Similarity=0.567 Sum_probs=32.6
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~ 153 (731)
|||||||||++|+++|++|+++ |++|+|||+.+..
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~-G~~V~vlE~~~~~ 36 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNA-GKKVLLLEGGERL 36 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHc-CCeEEEEecCCCc
Confidence 8999999999999999999999 9999999997543
No 94
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.75 E-value=1.5e-05 Score=89.15 Aligned_cols=34 Identities=29% Similarity=0.470 Sum_probs=32.4
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
.+|||||||||++|+++|.+|++. |++|+|||++
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~-G~~V~liEk~ 58 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGAL-GKRVAIAEEY 58 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC-cCEEEEEeCC
Confidence 479999999999999999999999 9999999995
No 95
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.75 E-value=1.9e-05 Score=86.08 Aligned_cols=40 Identities=28% Similarity=0.421 Sum_probs=35.9
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCC
Q psy7389 114 GDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (731)
Q Consensus 114 ~~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~ 153 (731)
|..++||||||||.+|+++|.+|++++|++|+|||+.+..
T Consensus 4 m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 4 MTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHI 43 (399)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSS
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 4457999999999999999999999658999999998765
No 96
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.73 E-value=1.8e-05 Score=83.54 Aligned_cols=34 Identities=32% Similarity=0.413 Sum_probs=32.3
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.+||||||+|++|+++|..|+++ |.+|+||||.+
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~-G~~V~vlE~~~ 35 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAA-GHQVHLFDKSR 35 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHC-CCcEEEEECCC
Confidence 47999999999999999999999 99999999985
No 97
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.71 E-value=1.5e-05 Score=85.00 Aligned_cols=32 Identities=22% Similarity=0.291 Sum_probs=30.5
Q ss_pred cEEEECCChhHHHHHHHHhhcCC------CeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKK------WKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G------~~VlVLEaG~ 151 (731)
||||||||++|+++|++|+++ | .+|+|||++.
T Consensus 2 dVvIIGgGi~Gls~A~~La~~-G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHER-YHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-HTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHh-ccccCCCceEEEEECCC
Confidence 899999999999999999999 7 9999999974
No 98
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.69 E-value=1.8e-05 Score=83.45 Aligned_cols=37 Identities=27% Similarity=0.319 Sum_probs=33.1
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 114 GDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 114 ~~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.+..+||||||+|++|+++|..|+++ |++|+|+|+.+
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~~-g~~v~vie~~~ 55 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLARA-EIKPILYEGMM 55 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHT-TCCCEEECCSS
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEecCC
Confidence 34579999999999999999999999 99999999964
No 99
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.65 E-value=3.2e-05 Score=83.72 Aligned_cols=38 Identities=39% Similarity=0.637 Sum_probs=34.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCC
Q psy7389 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (731)
Q Consensus 115 ~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~ 153 (731)
...+||+|||||++|+++|.+|+++ |.+|+|||+.+..
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~-g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASS-GQRVLIVDRRPHI 64 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHHC-CCceEEEeccCCC
Confidence 3579999999999999999999999 9999999998654
No 100
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.64 E-value=2.7e-05 Score=84.97 Aligned_cols=35 Identities=34% Similarity=0.388 Sum_probs=32.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCe-EEEEecCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWK-VLLLEAGI 151 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~-VlVLEaG~ 151 (731)
..+||||||||++|+++|..|+++ |.+ |+|||+.+
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~-G~~~v~v~E~~~ 38 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQA-GIGKVTLLESSS 38 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCC
Confidence 469999999999999999999999 999 99999975
No 101
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.63 E-value=3e-05 Score=87.47 Aligned_cols=37 Identities=27% Similarity=0.399 Sum_probs=34.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~ 153 (731)
..+||||||||.+|+++|.+|+++ |++|+|||+.+..
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~-G~~V~vlE~~~~~ 39 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDS-GLNVVVLEARDRV 39 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCCCC
Confidence 468999999999999999999999 9999999998654
No 102
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=97.63 E-value=3.1e-05 Score=84.84 Aligned_cols=34 Identities=21% Similarity=0.346 Sum_probs=32.1
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~ 153 (731)
||||||||++|+++|++|+++ |++|+||||.+..
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-G~~V~vlE~~~~~ 35 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARN-GHEIIVLEKSAMI 35 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-TCEEEEECSSSSS
T ss_pred cEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCC
Confidence 899999999999999999999 9999999998654
No 103
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.63 E-value=3.8e-05 Score=84.60 Aligned_cols=40 Identities=28% Similarity=0.420 Sum_probs=36.4
Q ss_pred CCCCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCC
Q psy7389 113 DGDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (731)
Q Consensus 113 ~~~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~ 153 (731)
+|+.++||||||+|.+|+++|.+|+++ |++|+|||+....
T Consensus 2 ~~~~~~~v~iiG~G~~gl~~a~~l~~~-g~~v~~~e~~~~~ 41 (433)
T 1d5t_A 2 HMDEEYDVIVLGTGLTECILSGIMSVN-GKKVLHMDRNPYY 41 (433)
T ss_dssp CCCSBCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CCCCcCCEEEECcCHHHHHHHHHHHHC-CCcEEEEecCCCc
Confidence 355689999999999999999999999 9999999998755
No 104
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.61 E-value=3.2e-05 Score=86.23 Aligned_cols=35 Identities=37% Similarity=0.541 Sum_probs=33.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.+|||||||||++|+++|.+|++. |++|+|+|+++
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~-G~~V~liEk~~ 36 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQL-GLKTALIEKYK 36 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHH-TCCEEEEECCB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC-CCEEEEEeCCC
Confidence 379999999999999999999999 99999999985
No 105
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.59 E-value=3.9e-05 Score=82.04 Aligned_cols=37 Identities=22% Similarity=0.195 Sum_probs=33.2
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 114 GDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 114 ~~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
|...+||||||+|++|+++|..|++. |++|+|||+.+
T Consensus 11 ~~~~~dvvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~ 47 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTGIFAAFQCGMN-NISCRIIESMP 47 (360)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhC-CCCEEEEecCC
Confidence 44579999999999999999999998 99999999975
No 106
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.59 E-value=4.4e-05 Score=82.94 Aligned_cols=35 Identities=26% Similarity=0.306 Sum_probs=33.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.++||||||+|++|+++|..|+++ |.+|+|||+.+
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~-G~~v~v~E~~~ 59 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQN-GIDVSVYERDN 59 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTT-TCEEEEEECSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCC
Confidence 479999999999999999999999 99999999985
No 107
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.59 E-value=4e-05 Score=82.48 Aligned_cols=36 Identities=39% Similarity=0.636 Sum_probs=33.4
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~ 153 (731)
++||+|||||.+|+++|.+|+++ |++|+|||+++..
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~-g~~v~v~E~~~~~ 36 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKL-NKKVLVIEKRNHI 36 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGG-TCCEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhC-CCcEEEEecCCCC
Confidence 37999999999999999999999 9999999998754
No 108
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.58 E-value=4e-05 Score=86.43 Aligned_cols=37 Identities=32% Similarity=0.496 Sum_probs=33.9
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 114 GDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 114 ~~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
+..+|||||||+|++|+++|.+|++. |++|+|+|+.+
T Consensus 29 ~~~~~DVvVIGgGpaGl~aA~~la~~-G~~V~liEk~~ 65 (519)
T 3qfa_A 29 KSYDYDLIIIGGGSGGLAAAKEAAQY-GKKVMVLDFVT 65 (519)
T ss_dssp SSCSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCCC
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeccC
Confidence 34579999999999999999999999 99999999964
No 109
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.57 E-value=5.1e-05 Score=84.79 Aligned_cols=39 Identities=28% Similarity=0.402 Sum_probs=35.3
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCC
Q psy7389 114 GDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (731)
Q Consensus 114 ~~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~ 153 (731)
+...+||||||||++|+++|++|+++ |++|+|||+.+..
T Consensus 8 ~~~~~~v~IIGaG~aGl~aA~~L~~~-g~~v~v~E~~~~~ 46 (489)
T 2jae_A 8 VKGSHSVVVLGGGPAGLCSAFELQKA-GYKVTVLEARTRP 46 (489)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSS
T ss_pred ccCCCCEEEECCCHHHHHHHHHHHHC-CCCEEEEeccCCC
Confidence 34478999999999999999999999 9999999998754
No 110
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.56 E-value=3.8e-05 Score=85.40 Aligned_cols=37 Identities=38% Similarity=0.624 Sum_probs=33.5
Q ss_pred CCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCC
Q psy7389 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (731)
Q Consensus 115 ~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~ 152 (731)
..+|||||||||++|+++|.+|++. |++|+|+|+.+.
T Consensus 2 ~~~~DVvVIGgG~aGl~aA~~l~~~-G~~V~liEk~~~ 38 (466)
T 3l8k_A 2 SLKYDVVVIGAGGAGYHGAFRLAKA-KYNVLMADPKGE 38 (466)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECTTSS
T ss_pred CccceEEEECCCHHHHHHHHHHHhC-CCeEEEEECCCC
Confidence 3479999999999999999999999 999999997653
No 111
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.56 E-value=4.4e-05 Score=82.90 Aligned_cols=34 Identities=29% Similarity=0.466 Sum_probs=32.6
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
++||||||+|++|+++|..|+++ |.+|+|||+.+
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~-G~~V~viE~~~ 39 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQ-GHRVVVVEQAR 39 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-CCcEEEEeCCC
Confidence 69999999999999999999999 99999999985
No 112
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.56 E-value=5.2e-05 Score=82.97 Aligned_cols=37 Identities=27% Similarity=0.248 Sum_probs=34.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCC-CeEEEEecCCCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKK-WKVLLLEAGIEE 153 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G-~~VlVLEaG~~~ 153 (731)
..+||||||||.+|+++|++|+++ | ++|+|||+.+..
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~-g~~~v~v~E~~~~~ 42 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQA-GFHDYTILERTDHV 42 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT-TCCCEEEECSSSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC-CCCcEEEEECCCCC
Confidence 468999999999999999999999 9 999999998654
No 113
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.55 E-value=4.2e-05 Score=82.84 Aligned_cols=34 Identities=29% Similarity=0.420 Sum_probs=32.3
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
++||||||+|++|+++|..|+++ |.+|+|||+.+
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~-G~~v~v~E~~~ 35 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKA-GIDNVILERQT 35 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHH-TCCEEEECSSC
T ss_pred CccEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCC
Confidence 58999999999999999999999 99999999974
No 114
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.55 E-value=5.7e-05 Score=84.53 Aligned_cols=37 Identities=35% Similarity=0.472 Sum_probs=33.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~ 153 (731)
+++||||||+|.+|+++|.+|+++ |++|+|||+.+..
T Consensus 38 ~~~~v~iiGaG~aGl~aA~~l~~~-g~~v~v~E~~~~~ 74 (495)
T 2vvm_A 38 GPWDVIVIGGGYCGLTATRDLTVA-GFKTLLLEARDRI 74 (495)
T ss_dssp CCEEEEEECCBHHHHHHHHHHHHT-TCCEEEECSSSBS
T ss_pred cCCCEEEECCcHHHHHHHHHHHHC-CCCEEEEeCCCCC
Confidence 349999999999999999999999 9999999998654
No 115
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.55 E-value=4.4e-05 Score=86.26 Aligned_cols=35 Identities=26% Similarity=0.487 Sum_probs=32.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.+||+||||||++|.++|.++|+. |+||+|+|+..
T Consensus 41 ydYDviVIG~GpaG~~aA~~aa~~-G~kValIE~~~ 75 (542)
T 4b1b_A 41 YDYDYVVIGGGPGGMASAKEAAAH-GARVLLFDYVK 75 (542)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHTT-TCCEEEECCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeccc
Confidence 369999999999999999999999 99999999874
No 116
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.53 E-value=5.2e-05 Score=84.92 Aligned_cols=35 Identities=31% Similarity=0.578 Sum_probs=32.2
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~ 152 (731)
+|||||||||++|+++|.+|++. |++|+|+|+.+.
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~~-G~~V~liEk~~~ 59 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQL-GMKVAVVEKRST 59 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCeEEEEecCCC
Confidence 69999999999999999999999 999999998653
No 117
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.53 E-value=4.1e-05 Score=85.42 Aligned_cols=36 Identities=28% Similarity=0.534 Sum_probs=33.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 115 ~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
..+|||||||+|++|+++|.+|++. |++|+|+|++.
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~-G~~V~liE~~~ 53 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAEL-GARAAVVESHK 53 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEecCC
Confidence 3479999999999999999999999 99999999874
No 118
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.52 E-value=5e-05 Score=84.53 Aligned_cols=37 Identities=22% Similarity=0.372 Sum_probs=33.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~ 153 (731)
..+||||||||.+|+++|..|+++ |++|+|||+....
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~-g~~v~v~E~~~~~ 51 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSR-GTDAVLLESSARL 51 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTT-TCCEEEECSSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHC-CCCEEEEEcCCCC
Confidence 378999999999999999999999 9999999998754
No 119
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.52 E-value=3.8e-05 Score=85.07 Aligned_cols=36 Identities=25% Similarity=0.288 Sum_probs=33.4
Q ss_pred cccEEEECCChhHHHHHHHHhhcCC------CeEEEEecCCCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKK------WKVLLLEAGIEE 153 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G------~~VlVLEaG~~~ 153 (731)
.+||||||||++|+++|++|+++ | ++|+|||+.+..
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~-G~~~~~~~~V~vlEa~~~~ 46 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKE-IKEKNLPLELTLVEASPRV 46 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-HTTTTCSEEEEEECSSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHh-ccccCCCCCEEEEECCCCC
Confidence 58999999999999999999999 8 999999998654
No 120
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.52 E-value=5.4e-05 Score=84.93 Aligned_cols=39 Identities=26% Similarity=0.262 Sum_probs=34.1
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCC
Q psy7389 114 GDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (731)
Q Consensus 114 ~~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~ 153 (731)
|...+||||||||.+|+++|++|+++ |++|+|||+.+..
T Consensus 10 ~~~~~~v~iiG~G~~Gl~aA~~l~~~-g~~v~v~E~~~~~ 48 (504)
T 1sez_A 10 HSSAKRVAVIGAGVSGLAAAYKLKIH-GLNVTVFEAEGKA 48 (504)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHTT-SCEEEEECSSSSS
T ss_pred cCCCCeEEEECCCHHHHHHHHHHHHC-CCcEEEEEeCCCC
Confidence 45579999999999999999999999 9999999998765
No 121
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.51 E-value=5.6e-05 Score=84.68 Aligned_cols=34 Identities=35% Similarity=0.461 Sum_probs=32.3
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
+|||||||||++|+++|.+|++. |++|+|+|++.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~-G~~V~liE~~~ 41 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKH-TDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT-CSCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCcEEEEeCCC
Confidence 69999999999999999999999 99999999973
No 122
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.51 E-value=4.7e-05 Score=85.85 Aligned_cols=36 Identities=39% Similarity=0.370 Sum_probs=33.7
Q ss_pred cccEEEECCChhHHHHHHHHhhcCC-CeEEEEecCCCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKK-WKVLLLEAGIEE 153 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G-~~VlVLEaG~~~ 153 (731)
.+||||||||++|+++|.+|+++ | ++|+|||+....
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~-G~~~V~VlEa~~ri 44 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQN-GIQDCLVLEARDRV 44 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHT-TCCSEEEECSSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhc-CCCCEEEEeCCCCC
Confidence 68999999999999999999999 9 999999998654
No 123
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.51 E-value=7.5e-05 Score=80.21 Aligned_cols=38 Identities=32% Similarity=0.385 Sum_probs=34.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecC-CCC
Q psy7389 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG-IEE 153 (731)
Q Consensus 115 ~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG-~~~ 153 (731)
...+||+|||+|++|+++|++|+++ |++|+|||+. ...
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~-G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRA-GHDVTILEANANRV 80 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHT-SCEEEEECSCSSCC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHC-CCcEEEEecccccc
Confidence 3478999999999999999999999 9999999998 543
No 124
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.49 E-value=5.4e-05 Score=84.09 Aligned_cols=33 Identities=27% Similarity=0.414 Sum_probs=31.9
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
+|||||||||++|+++|.+|++. |++|+|||++
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~-G~~V~liEk~ 37 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAAL-GKKVAIAEEF 37 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTT-TCCEEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-CCEEEEEeCC
Confidence 69999999999999999999999 9999999994
No 125
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.49 E-value=6.7e-05 Score=80.90 Aligned_cols=34 Identities=32% Similarity=0.337 Sum_probs=32.6
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.+||||||+|++|+++|..|+++ |.+|+|||+.+
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~-G~~v~viE~~~ 44 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQN-GWDVRLHEKSS 44 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCCEEEEecCC
Confidence 68999999999999999999999 99999999985
No 126
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.49 E-value=6.5e-05 Score=79.00 Aligned_cols=35 Identities=34% Similarity=0.551 Sum_probs=32.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 115 ~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
...+||||||+|++|+++|.+|++. |++|+|||+.
T Consensus 6 ~~~~dvvIIG~G~aGl~aA~~l~~~-g~~v~lie~~ 40 (325)
T 2q7v_A 6 AHDYDVVIIGGGPAGLTAAIYTGRA-QLSTLILEKG 40 (325)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHc-CCcEEEEeCC
Confidence 3479999999999999999999998 9999999997
No 127
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.48 E-value=7.1e-05 Score=81.28 Aligned_cols=34 Identities=21% Similarity=0.169 Sum_probs=32.5
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.+||||||+|++|+++|..|+++ |.+|+|||+.+
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~-G~~v~v~E~~~ 38 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDA-GVDVDVYERSP 38 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhC-CCCEEEEecCC
Confidence 68999999999999999999998 99999999975
No 128
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.48 E-value=6.4e-05 Score=83.61 Aligned_cols=35 Identities=26% Similarity=0.397 Sum_probs=32.6
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCC--eEEEEecCCCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKW--KVLLLEAGIEE 153 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~--~VlVLEaG~~~ 153 (731)
+||||||||.+|+++|++|+++ |. +|+|||+.+..
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~-G~~~~V~vlEa~~~~ 39 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRA-PCPPKVVLVESSERL 39 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTS-SSCCEEEEECSSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhC-CCCCcEEEEeCCCCC
Confidence 6999999999999999999999 99 99999997654
No 129
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.47 E-value=7.3e-05 Score=78.86 Aligned_cols=35 Identities=17% Similarity=0.185 Sum_probs=32.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
..+||||||+|++|+++|.+|++. |++|+|+|+.+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~ 38 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMR-GLSFRFVDPLP 38 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSS
T ss_pred CcCcEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence 479999999999999999999998 99999999975
No 130
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.46 E-value=7.9e-05 Score=77.82 Aligned_cols=33 Identities=30% Similarity=0.379 Sum_probs=31.8
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
.+||||||+|++|+++|.+|++. |++|+|+|+.
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~ 47 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARY-MLKTLVIGET 47 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred ccCEEEECccHHHHHHHHHHHHC-CCcEEEEecc
Confidence 69999999999999999999999 9999999985
No 131
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.45 E-value=8.2e-05 Score=71.01 Aligned_cols=33 Identities=36% Similarity=0.603 Sum_probs=31.7
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
||++|||+|++|+.+|..|++. |.+|+|+|+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-GLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCcEEEEeCCC
Confidence 7999999999999999999998 99999999985
No 132
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.44 E-value=7.1e-05 Score=82.66 Aligned_cols=36 Identities=31% Similarity=0.374 Sum_probs=33.8
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~ 153 (731)
++||||||+|.+|+++|.+|+++ |++|+|||+....
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~-g~~v~v~E~~~~~ 40 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKA-GLSVAVIEARDRV 40 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCcEEEEECCCCC
Confidence 68999999999999999999999 9999999998654
No 133
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.44 E-value=7.5e-05 Score=82.97 Aligned_cols=36 Identities=33% Similarity=0.554 Sum_probs=33.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 115 ~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
..+|||||||+|++|+++|.+|++. |++|+|+|++.
T Consensus 2 ~~~~dVvIIGgG~aGl~aA~~l~~~-g~~V~liE~~~ 37 (463)
T 2r9z_A 2 TQHFDLIAIGGGSGGLAVAEKAAAF-GKRVALIESKA 37 (463)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred CccCcEEEECCCHHHHHHHHHHHhC-CCcEEEEcCCC
Confidence 3479999999999999999999998 99999999974
No 134
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.44 E-value=0.0016 Score=72.94 Aligned_cols=64 Identities=13% Similarity=0.108 Sum_probs=41.8
Q ss_pred hhhccHhhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEe--CCEEEEEEeccEEEecccC
Q psy7389 309 NGAFIRPIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGA 374 (731)
Q Consensus 309 ~~~~L~~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~--~g~~~~i~A~k~VVLAAGa 374 (731)
...||..+++ +-+..|..+++|++|..++.+.........-|.+.+ ++...++.|+ .||+|+|.
T Consensus 147 ~~~Yl~~~A~-~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar-~vVlatG~ 212 (501)
T 4b63_A 147 FEDYMRWCAQ-QFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTR-KVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHH-TTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEE-EEEECCCC
T ss_pred HHHHHHHHHH-HcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeC-EEEECcCC
Confidence 3456766666 666779999999999986533211111122344444 4667789998 69999994
No 135
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.43 E-value=8.2e-05 Score=76.73 Aligned_cols=34 Identities=41% Similarity=0.604 Sum_probs=32.0
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.+||+|||+|++|+++|.+|++. |++|+|+|++.
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~ 35 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRA-RKNILLVDAGE 35 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence 48999999999999999999999 99999999874
No 136
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.43 E-value=7.4e-05 Score=82.65 Aligned_cols=36 Identities=36% Similarity=0.486 Sum_probs=33.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 115 ~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
..+|||||||||++|+++|.+|++. |++|+|+|++.
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~-g~~V~liE~~~ 37 (450)
T 1ges_A 2 TKHYDYIAIGGGSGGIASINRAAMY-GQKCALIEAKE 37 (450)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHTT-TCCEEEEESSC
T ss_pred CccCCEEEECCCHHHHHHHHHHHhC-CCeEEEEcCCC
Confidence 3479999999999999999999998 99999999974
No 137
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.42 E-value=7.8e-05 Score=83.29 Aligned_cols=34 Identities=32% Similarity=0.396 Sum_probs=32.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
.+|||||||||++|+++|.+|++. |++|+|+|++
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~-G~~V~liEk~ 41 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLN-GARVACLDFV 41 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCEEEEEEec
Confidence 479999999999999999999999 9999999975
No 138
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.42 E-value=9.4e-05 Score=82.21 Aligned_cols=36 Identities=28% Similarity=0.369 Sum_probs=33.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 115 ~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
..++||||||+|++|+++|.+|++. |++|+|+|++.
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lie~~~ 37 (467)
T 1zk7_A 2 EPPVQVAVIGSGGAAMAAALKAVEQ-GAQVTLIERGT 37 (467)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCC
Confidence 4579999999999999999999998 99999999983
No 139
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.41 E-value=9.3e-05 Score=83.87 Aligned_cols=35 Identities=26% Similarity=0.433 Sum_probs=32.6
Q ss_pred CcccEEEECCChhHHHHHHHHhh---cCCCeEEEEecCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSE---IKKWKVLLLEAGI 151 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~---~~G~~VlVLEaG~ 151 (731)
..+||||||||++|+++|+.|++ . |.+|+|||+..
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~-G~~V~liE~~~ 41 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQ-QANITLIESAA 41 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCS-SCEEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCC-CCEEEEECCCC
Confidence 36899999999999999999999 8 99999999964
No 140
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.40 E-value=8.4e-05 Score=83.01 Aligned_cols=38 Identities=24% Similarity=0.400 Sum_probs=34.4
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCC
Q psy7389 114 GDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (731)
Q Consensus 114 ~~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~ 152 (731)
|+.+|||||||+|++|+++|.+|++. |++|+|+|+.+.
T Consensus 3 m~~~~dVvIIGaG~aGl~aA~~l~~~-G~~V~liE~~~~ 40 (482)
T 1ojt_A 3 ADAEYDVVVLGGGPGGYSAAFAAADE-GLKVAIVERYKT 40 (482)
T ss_dssp SEEEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSC
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCC
Confidence 44579999999999999999999998 999999999653
No 141
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.39 E-value=8e-05 Score=81.87 Aligned_cols=34 Identities=26% Similarity=0.228 Sum_probs=31.7
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.+||||||+|++|+++|..|+++ |++|+|||+..
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~-G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQH-DVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHT-TCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHC-CCeEEEEcCCC
Confidence 47999999999999999999999 99999999974
No 142
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.39 E-value=8.5e-05 Score=83.08 Aligned_cols=35 Identities=29% Similarity=0.459 Sum_probs=32.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.+|||||||||++|+++|.+|++. |++|+|+|+.+
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~-G~~V~liEk~~ 39 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQL-GKKVAVADYVE 39 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC-CCeEEEEEecc
Confidence 379999999999999999999999 99999999853
No 143
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.39 E-value=7.6e-05 Score=78.89 Aligned_cols=36 Identities=28% Similarity=0.351 Sum_probs=33.0
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 114 GDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 114 ~~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
+...+||||||+|++|+++|..|++. |++|+|+|+.
T Consensus 11 ~~~~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~ 46 (335)
T 2a87_A 11 HHPVRDVIVIGSGPAGYTAALYAARA-QLAPLVFEGT 46 (335)
T ss_dssp CCCCEEEEEECCHHHHHHHHHHHHHT-TCCCEEECCS
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHhC-CCeEEEEecC
Confidence 34579999999999999999999998 9999999965
No 144
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.37 E-value=9.7e-05 Score=83.92 Aligned_cols=35 Identities=29% Similarity=0.408 Sum_probs=33.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.++||||||+|++|+++|..|+++ |.+|+||||.+
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~-G~~V~vlEr~~ 59 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHR-QVGHLVVEQTD 59 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCC
Confidence 369999999999999999999998 99999999985
No 145
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.37 E-value=8.1e-05 Score=83.00 Aligned_cols=36 Identities=28% Similarity=0.461 Sum_probs=33.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 115 ~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
..+|||||||+|++|+++|.+|++. |++|+|+|+.+
T Consensus 3 ~~~~dVvIIGgG~aGl~aA~~l~~~-G~~V~liE~~~ 38 (478)
T 1v59_A 3 NKSHDVVIIGGGPAGYVAAIKAAQL-GFNTACVEKRG 38 (478)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHC-CCeEEEEecCC
Confidence 3479999999999999999999999 99999999964
No 146
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.36 E-value=9.8e-05 Score=82.39 Aligned_cols=35 Identities=37% Similarity=0.603 Sum_probs=33.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.+|||||||||++|+++|.+|++. |++|+|+|++.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~-g~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASY-GAKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-SCCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHC-CCcEEEEeCCC
Confidence 479999999999999999999998 99999999974
No 147
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.34 E-value=0.00012 Score=81.25 Aligned_cols=36 Identities=28% Similarity=0.358 Sum_probs=33.2
Q ss_pred cccEEEECCChhHHHHHHHHhhcCC--CeEEEEecCCCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKK--WKVLLLEAGIEE 153 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G--~~VlVLEaG~~~ 153 (731)
.+||||||||.+|+++|++|+++ | ++|+|||+.+..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~-g~~~~v~v~E~~~~~ 41 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERA-FPDLNITLLEAGERL 41 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHH-CTTSEEEEECSSSSS
T ss_pred cccEEEECCCHHHHHHHHHHHHh-CCCCCEEEEECCCCC
Confidence 58999999999999999999999 8 999999997643
No 148
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.32 E-value=0.00014 Score=82.54 Aligned_cols=35 Identities=29% Similarity=0.350 Sum_probs=32.7
Q ss_pred CcccEEEECCChhHHHHHHHHhh---cCCCeEEEEecCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSE---IKKWKVLLLEAGI 151 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~---~~G~~VlVLEaG~ 151 (731)
..+||||||||++|+++|..|++ . |.+|+|||+..
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~-G~~V~liE~~~ 61 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQG-TADITLLQAPD 61 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTT-SSEEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCC-CCcEEEEeCCC
Confidence 46899999999999999999999 7 99999999964
No 149
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.30 E-value=0.00013 Score=81.76 Aligned_cols=35 Identities=26% Similarity=0.415 Sum_probs=32.6
Q ss_pred CCCcccEEEECCChhHHHHHHHHhh-cCCCeEEEEec
Q psy7389 114 GDMTFDFIIIGAGSAGCVLANRLSE-IKKWKVLLLEA 149 (731)
Q Consensus 114 ~~~~~DvIIVGsG~aG~~aA~~LA~-~~G~~VlVLEa 149 (731)
|..+|||||||||++|+++|.+|++ . |++|+|+|+
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~-G~~V~liE~ 39 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLY-GKRVAVVDV 39 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHH-CCCEEEEES
T ss_pred cccccCEEEECCChhHHHHHHHHHHhc-CCeEEEEec
Confidence 5557999999999999999999999 9 999999994
No 150
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.28 E-value=0.00011 Score=82.70 Aligned_cols=34 Identities=32% Similarity=0.492 Sum_probs=30.8
Q ss_pred cccEEEECCChhHHHHHHHHhh---cCCCeEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSE---IKKWKVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~---~~G~~VlVLEaG~ 151 (731)
.+||||||||++|+++|+.|++ . |.+|+|||+..
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~-G~~V~lvE~~~ 38 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDD-RIDVTLVESGN 38 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGG-GSEEEEEEC--
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCC-CCEEEEEecCC
Confidence 3799999999999999999999 8 99999999974
No 151
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.28 E-value=0.0001 Score=77.13 Aligned_cols=33 Identities=21% Similarity=0.347 Sum_probs=31.5
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
.+||||||+|++|+++|.+|++. |++|+|+|+.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~ 37 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARA-NLQPVLITGM 37 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT-TCCCEEECCS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCcEEEEccC
Confidence 69999999999999999999998 9999999965
No 152
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.28 E-value=0.00016 Score=77.00 Aligned_cols=34 Identities=29% Similarity=0.256 Sum_probs=32.1
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~ 152 (731)
+||||||+|.+|+.+|..||++ |.+|+|+|+.+.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~-G~~V~liE~~~~ 35 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRL-GVPVRLFEMRPK 35 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEECCTTT
T ss_pred CCEEEECchHHHHHHHHHHHHC-CCcEEEEeccCC
Confidence 6999999999999999999999 999999999863
No 153
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.28 E-value=0.00014 Score=75.75 Aligned_cols=32 Identities=31% Similarity=0.399 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCC-eEEEEecC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAG 150 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~-~VlVLEaG 150 (731)
|||+|||+|++|+++|..|++. |+ +|+|+|+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~-g~~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRG-GVKNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-TCSSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHHC-CCCcEEEEcCC
Confidence 8999999999999999999998 99 99999986
No 154
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.28 E-value=0.00018 Score=80.54 Aligned_cols=37 Identities=32% Similarity=0.347 Sum_probs=34.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~ 153 (731)
..+||||||+|++|+++|..|+++ |.+|+|||+.+..
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~-g~~v~vlE~~~~~ 68 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGA-GHQVTVLEASERP 68 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHH-TCEEEEECSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEECCCCC
Confidence 468999999999999999999999 9999999998654
No 155
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.26 E-value=0.00016 Score=80.32 Aligned_cols=34 Identities=24% Similarity=0.456 Sum_probs=32.6
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
+|||||||+|++|+++|.+|++. |++|+|+|+.+
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lie~~~ 35 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQL-GMKTACVEKRG 35 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 59999999999999999999999 99999999985
No 156
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.25 E-value=0.00017 Score=80.80 Aligned_cols=34 Identities=38% Similarity=0.579 Sum_probs=32.4
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
+|||||||||++|+++|.+|++. |++|+|+|++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~-g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARH-NAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHC-CCcEEEEeCCC
Confidence 59999999999999999999998 99999999985
No 157
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.25 E-value=0.00017 Score=79.92 Aligned_cols=34 Identities=35% Similarity=0.575 Sum_probs=32.3
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
+|||||||+|++|+++|.+|++. |++|+|+|+++
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~-g~~V~lie~~~ 34 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQL-GMKVGVVEKEK 34 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSS
T ss_pred CCCEEEECCChhHHHHHHHHHHC-CCeEEEEeCCC
Confidence 48999999999999999999999 99999999985
No 158
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.25 E-value=0.0002 Score=77.37 Aligned_cols=36 Identities=25% Similarity=0.444 Sum_probs=33.5
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~ 153 (731)
++||+|||+|.+|+++|.+|+++ |++|+|+|+.+..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~-g~~v~v~E~~~~~ 38 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEK-GHQVHIIDQRDHI 38 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCcEEEEEecCCc
Confidence 48999999999999999999998 9999999998654
No 159
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.25 E-value=0.00016 Score=75.25 Aligned_cols=32 Identities=25% Similarity=0.418 Sum_probs=30.4
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEec
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEA 149 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEa 149 (731)
+|||||||+|++|+++|.+|++. |++|+|||+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~-g~~v~li~~ 32 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARK-GIRTGLMGE 32 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTT-TCCEEEECS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCcEEEEeC
Confidence 48999999999999999999998 999999985
No 160
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.24 E-value=0.00021 Score=78.84 Aligned_cols=35 Identities=37% Similarity=0.355 Sum_probs=32.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCC--eEEEEecCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKW--KVLLLEAGI 151 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~--~VlVLEaG~ 151 (731)
..+||+|||||++|+++|..|++. |. +|+|+|+.+
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~-G~~~~V~v~E~~~ 41 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAE-KAFDQVTLFERRG 41 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT-TCCSEEEEECSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhc-CCCCCeEEEecCC
Confidence 368999999999999999999999 99 999999975
No 161
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.24 E-value=0.00018 Score=79.91 Aligned_cols=35 Identities=29% Similarity=0.408 Sum_probs=33.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.+|||||||+|++|+++|.+|++. |++|+|+|+.+
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~-g~~V~liE~~~ 39 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQL-GFKTTCIEKRG 39 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH-TCCEEEEECSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 369999999999999999999999 99999999985
No 162
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.24 E-value=0.0019 Score=70.77 Aligned_cols=64 Identities=13% Similarity=0.144 Sum_probs=44.7
Q ss_pred hhhccHhhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEe-CCEEEEEEeccEEEecccCCCchHHHhhcCCC
Q psy7389 309 NGAFIRPIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFY-KKKLRRARAKKEVISSAGAINSPKILMLSGIG 387 (731)
Q Consensus 309 ~~~~L~~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~-~g~~~~i~A~k~VVLAAGai~Tp~LLl~SGig 387 (731)
...++....+ +.|+++++++.|++|.- + + +.+.. ++...++.++ .||+|+|. ..+.++..||.+
T Consensus 202 ~~~~l~~~l~-~~GV~~~~~~~v~~v~~----~-----~---~~~~~~~g~~~~i~~d-~vi~~~G~-~~~~~~~~~~~~ 266 (430)
T 3hyw_A 202 SKRLVEDLFA-ERNIDWIANVAVKAIEP----D-----K---VIYEDLNGNTHEVPAK-FTMFMPSF-QGPEVVASAGDK 266 (430)
T ss_dssp HHHHHHHHHH-HTTCEEECSCEEEEECS----S-----E---EEEECTTSCEEEEECS-EEEEECEE-ECCHHHHTTCTT
T ss_pred HHHHHHHHHH-hCCeEEEeCceEEEEeC----C-----c---eEEEeeCCCceEeecc-eEEEeccC-CCchHHHhcccc
Confidence 3345666666 78999999999999852 2 2 33343 4556689999 79999995 445677777643
No 163
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.24 E-value=0.00014 Score=75.68 Aligned_cols=33 Identities=30% Similarity=0.398 Sum_probs=31.6
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEE-EecC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLL-LEAG 150 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlV-LEaG 150 (731)
.+||||||+|++|+++|.+|++. |++|+| +|+.
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~li~e~~ 37 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRG-GLKNVVMFEKG 37 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-TCSCEEEECSS
T ss_pred CceEEEECCCHHHHHHHHHHHHC-CCCeEEEEeCC
Confidence 69999999999999999999999 999999 9994
No 164
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.23 E-value=0.00017 Score=80.28 Aligned_cols=35 Identities=26% Similarity=0.490 Sum_probs=33.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.+|||||||+|++|+++|.+|++. |++|+|+|+.+
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~-g~~V~liE~~~ 39 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQL-GFKTVCIEKNE 39 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCC
Confidence 369999999999999999999999 99999999985
No 165
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.23 E-value=0.00021 Score=79.77 Aligned_cols=37 Identities=35% Similarity=0.397 Sum_probs=34.0
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCC-CeEEEEecCCCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKK-WKVLLLEAGIEE 153 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G-~~VlVLEaG~~~ 153 (731)
..+||+|||||++|+++|++|+++ | .+|+|||+.+..
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~-g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTEL-GYKNWHLYECNDTP 45 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHT-TCCSEEEEESSSSS
T ss_pred cCCCEEEECcCHHHHHHHHHHHHc-CCCCEEEEeCCCCC
Confidence 368999999999999999999998 8 899999998754
No 166
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.22 E-value=0.00034 Score=81.70 Aligned_cols=39 Identities=28% Similarity=0.425 Sum_probs=35.2
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCC
Q psy7389 114 GDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (731)
Q Consensus 114 ~~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~ 153 (731)
....+||||||||++|+++|..|++. |++|+|+|+++..
T Consensus 388 ~~~~~~VvIIGgG~AGl~aA~~La~~-G~~V~liE~~~~~ 426 (690)
T 3k30_A 388 KESDARVLVVGAGPSGLEAARALGVR-GYDVVLAEAGRDL 426 (690)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSSS
T ss_pred ccccceEEEECCCHHHHHHHHHHHHC-CCeEEEEecCCCC
Confidence 44579999999999999999999999 9999999998643
No 167
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.21 E-value=0.0002 Score=80.14 Aligned_cols=32 Identities=28% Similarity=0.508 Sum_probs=30.8
Q ss_pred cccEEEECCChhHHHHHHHHhh-cCCCeEEEEec
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSE-IKKWKVLLLEA 149 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~-~~G~~VlVLEa 149 (731)
+|||||||||++|+++|.+|++ . |++|+|+|+
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~-G~~V~liE~ 35 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLH-KKRVAVIDL 35 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHH-CCCEEEEES
T ss_pred cccEEEECCCHHHHHHHHHHHHHc-CCEEEEEec
Confidence 6999999999999999999999 9 999999993
No 168
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.21 E-value=0.00026 Score=80.83 Aligned_cols=41 Identities=24% Similarity=0.301 Sum_probs=37.5
Q ss_pred CCCCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCCC
Q psy7389 113 DGDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEP 154 (731)
Q Consensus 113 ~~~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~~ 154 (731)
+|+.+|||||||+|..|+++|..||+. |++||+|||..++.
T Consensus 4 ~~~~~~D~~i~GtGl~~~~~a~~~~~~-g~~vl~id~~~~~g 44 (650)
T 1vg0_A 4 NLPSDFDVIVIGTGLPESIIAAACSRS-GQRVLHVDSRSYYG 44 (650)
T ss_dssp CCCSBCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSC
T ss_pred cCCCcCCEEEECCcHHHHHHHHHHHhC-CCEEEEEcCCCccc
Confidence 455689999999999999999999999 99999999998874
No 169
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.20 E-value=0.00019 Score=79.43 Aligned_cols=33 Identities=33% Similarity=0.572 Sum_probs=32.0
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
+|||||||+|++|+++|.+|++. |++|+|+|+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lie~~ 35 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQL-GQKVTIVEKG 35 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEECC
Confidence 69999999999999999999999 9999999997
No 170
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.19 E-value=0.00023 Score=76.79 Aligned_cols=33 Identities=33% Similarity=0.654 Sum_probs=31.1
Q ss_pred cEEEECCChhHHHHHHHHhhc-CCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEI-KKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~-~G~~VlVLEaG~ 151 (731)
||||||+|++|+++|..|+++ ||.+|+|||+.+
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~ 35 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKND 35 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSC
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCC
Confidence 899999999999999999996 699999999985
No 171
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.18 E-value=0.00019 Score=81.02 Aligned_cols=34 Identities=32% Similarity=0.504 Sum_probs=32.0
Q ss_pred cccEEEECCChhHHHHHHHHhh------------cCCCeEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSE------------IKKWKVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~------------~~G~~VlVLEaG~ 151 (731)
.+||||||||++|+++|..|++ + |.+|+|||+..
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~-G~~V~liE~~~ 52 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSP-KLNITLIESPD 52 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSC-SCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCC-CCeEEEEeCCC
Confidence 6899999999999999999999 7 99999999864
No 172
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.17 E-value=0.00022 Score=78.95 Aligned_cols=35 Identities=29% Similarity=0.481 Sum_probs=32.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.+|||||||+|++|+++|.+|++. |++|+|+|++.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~-g~~V~lie~~~ 38 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQL-GIPTVLVEGQA 38 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHH-TCCEEEECSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCEEEEEccCC
Confidence 369999999999999999999999 99999999953
No 173
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.16 E-value=0.00021 Score=79.37 Aligned_cols=33 Identities=27% Similarity=0.572 Sum_probs=31.9
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
+|||||||+|++|+++|.+|++. |++|+|+|+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~-G~~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQL-GLSTAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCC
Confidence 59999999999999999999999 9999999997
No 174
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.16 E-value=0.00026 Score=76.63 Aligned_cols=32 Identities=38% Similarity=0.424 Sum_probs=30.4
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.|+|||+|++|+++|..|+++ |++|+|+||.+
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~-G~~v~v~Er~~ 34 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKH-GIKVTIYERNS 34 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSC
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCCEEEEecCC
Confidence 499999999999999999999 99999999975
No 175
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.15 E-value=0.00018 Score=75.66 Aligned_cols=32 Identities=28% Similarity=0.360 Sum_probs=31.1
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEec
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEA 149 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEa 149 (731)
.+||||||+|++|+++|..|++. |++|+|||+
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~-g~~v~lie~ 39 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARA-ELKPLLFEG 39 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCCEEECC
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCeEEEEec
Confidence 69999999999999999999998 999999998
No 176
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.07 E-value=0.00033 Score=77.89 Aligned_cols=37 Identities=38% Similarity=0.462 Sum_probs=32.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCC-eEEEEecCCCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGIEE 153 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~-~VlVLEaG~~~ 153 (731)
..+||+|||+|.+|+++|.+|+++ |. +|+|||+++..
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~-g~~~v~~~e~~~~~ 40 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEA-GITDLLILEATDHI 40 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHT-TCCCEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhc-CCCceEEEeCCCCC
Confidence 368999999999999999999998 98 89999998654
No 177
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.06 E-value=0.00031 Score=77.91 Aligned_cols=34 Identities=44% Similarity=0.696 Sum_probs=32.6
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
+|||||||+|++|+++|.+|++. |++|+|+|++.
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~-g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQL-GLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 69999999999999999999998 99999999985
No 178
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.06 E-value=0.0003 Score=81.64 Aligned_cols=34 Identities=38% Similarity=0.521 Sum_probs=32.5
Q ss_pred cccEEEECCChhHHHHHHHHhh-----cCCCeEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSE-----IKKWKVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~-----~~G~~VlVLEaG~ 151 (731)
++||||||+|++|+++|..|++ . |.+|+||||.+
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~-Gi~v~viE~~~ 46 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKP-DLKVRIIDKRS 46 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHST-TCCEEEECSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccC-CCCEEEEeCCC
Confidence 6999999999999999999999 8 99999999974
No 179
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.05 E-value=0.00034 Score=82.34 Aligned_cols=37 Identities=41% Similarity=0.432 Sum_probs=33.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~ 153 (731)
..+||||||+|++|+++|..|+++ |++|+|||++...
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~-g~~v~v~E~~~~~ 371 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNF-GIKVTVLEAKDRI 371 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC-CCcEEEEecccce
Confidence 368999999999999999999999 9999999997643
No 180
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.02 E-value=0.00054 Score=75.78 Aligned_cols=36 Identities=25% Similarity=0.343 Sum_probs=33.4
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~ 152 (731)
..+||+|||||++|+++|..|++. |++|+|+|+.+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~-G~~V~v~e~~~~ 156 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK-GYEVHVYDRYDR 156 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH-TCCEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeccCC
Confidence 368999999999999999999999 999999999864
No 181
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.01 E-value=0.00042 Score=74.76 Aligned_cols=64 Identities=6% Similarity=0.033 Sum_probs=45.6
Q ss_pred hccHhhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEeCCEEEEEEeccEEEecccCCCchHHHhhcCCC
Q psy7389 311 AFIRPIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIG 387 (731)
Q Consensus 311 ~~L~~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~~g~~~~i~A~k~VVLAAGai~Tp~LLl~SGig 387 (731)
..+...++ +.|++|++++.|++|..++ + .+ .|.+. ++ .++.++ .||+|+|......+|..+|+.
T Consensus 191 ~~l~~~l~-~~gv~i~~~~~v~~i~~~~--~-----~~-~v~~~-~g--~~i~~d-~vv~a~G~~p~~~l~~~~g~~ 254 (384)
T 2v3a_A 191 KAVQAGLE-GLGVRFHLGPVLASLKKAG--E-----GL-EAHLS-DG--EVIPCD-LVVSAVGLRPRTELAFAAGLA 254 (384)
T ss_dssp HHHHHHHH-TTTCEEEESCCEEEEEEET--T-----EE-EEEET-TS--CEEEES-EEEECSCEEECCHHHHHTTCC
T ss_pred HHHHHHHH-HcCCEEEeCCEEEEEEecC--C-----EE-EEEEC-CC--CEEECC-EEEECcCCCcCHHHHHHCCCC
Confidence 44555666 7899999999999998652 2 22 34432 33 368899 699999987666677777764
No 182
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.00 E-value=0.00038 Score=78.03 Aligned_cols=35 Identities=20% Similarity=0.252 Sum_probs=32.4
Q ss_pred cccEEEECCChhHHHHHHHHhhc-C-CCeEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEI-K-KWKVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~-~-G~~VlVLEaG~ 151 (731)
+|||||||||++|+++|.+|++. + |++|+|+|++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 48999999999999999999996 3 89999999985
No 183
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=96.99 E-value=0.00039 Score=79.77 Aligned_cols=35 Identities=26% Similarity=0.439 Sum_probs=32.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 115 ~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
...|||||||||++|+++|.+|++. |++|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~-g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKY-GAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhC-CCeEEEEecc
Confidence 3479999999999999999999999 9999999984
No 184
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=96.91 E-value=0.0006 Score=74.83 Aligned_cols=66 Identities=18% Similarity=0.205 Sum_probs=46.8
Q ss_pred ccHhhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEeCCEEEEEEeccEEEecccCCCchHHHhhcCCC
Q psy7389 312 FIRPIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIG 387 (731)
Q Consensus 312 ~L~~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~~g~~~~i~A~k~VVLAAGai~Tp~LLl~SGig 387 (731)
++...++ +.|++|++++.|++|..++.++ ++.+|.+.+ | .++.++ .||+|+|......+|..+|+.
T Consensus 196 ~l~~~l~-~~GV~i~~~~~v~~i~~~~~~~-----~v~~v~~~~-G--~~i~~D-~Vv~a~G~~p~~~l~~~~gl~ 261 (431)
T 1q1r_A 196 FYEHLHR-EAGVDIRTGTQVCGFEMSTDQQ-----KVTAVLCED-G--TRLPAD-LVIAGIGLIPNCELASAAGLQ 261 (431)
T ss_dssp HHHHHHH-HHTCEEECSCCEEEEEECTTTC-----CEEEEEETT-S--CEEECS-EEEECCCEEECCHHHHHTTCC
T ss_pred HHHHHHH-hCCeEEEeCCEEEEEEeccCCC-----cEEEEEeCC-C--CEEEcC-EEEECCCCCcCcchhhccCCC
Confidence 3445555 6799999999999998620123 466666543 3 268898 699999977666788887764
No 185
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=96.86 E-value=0.00076 Score=75.41 Aligned_cols=64 Identities=8% Similarity=0.213 Sum_probs=46.2
Q ss_pred hccHhhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEeCCEEEEEEeccEEEecccCCCchHHHhhcCCC
Q psy7389 311 AFIRPIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIG 387 (731)
Q Consensus 311 ~~L~~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~~g~~~~i~A~k~VVLAAGai~Tp~LLl~SGig 387 (731)
..+...++ +.|++|++++.|++|..++ + ++ .|.+. +|. ++.++ .||+|+|...+..+|..+|+.
T Consensus 230 ~~~~~~l~-~~GV~v~~~~~V~~i~~~~--~-----~~-~v~l~-dG~--~i~aD-~Vv~a~G~~pn~~l~~~~gl~ 293 (493)
T 1m6i_A 230 NWTMEKVR-REGVKVMPNAIVQSVGVSS--G-----KL-LIKLK-DGR--KVETD-HIVAAVGLEPNVELAKTGGLE 293 (493)
T ss_dssp HHHHHHHH-TTTCEEECSCCEEEEEEET--T-----EE-EEEET-TSC--EEEES-EEEECCCEEECCTTHHHHTCC
T ss_pred HHHHHHHH-hcCCEEEeCCEEEEEEecC--C-----eE-EEEEC-CCC--EEECC-EEEECCCCCccHHHHHHcCCc
Confidence 34555566 7899999999999998642 3 33 44443 342 68999 699999987777788777764
No 186
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=96.76 E-value=0.00087 Score=74.00 Aligned_cols=35 Identities=17% Similarity=0.185 Sum_probs=32.2
Q ss_pred ccEEEECCChhHHHHHHHHhhc-CCCeEEEEecCCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEI-KKWKVLLLEAGIE 152 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~-~G~~VlVLEaG~~ 152 (731)
+||||||+|++|+++|.+|++. +|.+|+|+|+.+.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~ 36 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDN 36 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 5899999999999999999996 5899999999874
No 187
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=96.75 E-value=0.012 Score=62.32 Aligned_cols=59 Identities=14% Similarity=0.073 Sum_probs=44.3
Q ss_pred CCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEe-CCEEEEEEeccEEEecccCCCchHHHhhcCC
Q psy7389 320 RKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFY-KKKLRRARAKKEVISSAGAINSPKILMLSGI 386 (731)
Q Consensus 320 ~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~-~g~~~~i~A~k~VVLAAGai~Tp~LLl~SGi 386 (731)
+.|++|++++.|++|..++ + ++.+|.+.. +|...++.++ .||+|+|.-..+.+|..+|+
T Consensus 214 ~~gv~i~~~~~v~~i~~~~--~-----~v~~v~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~~~~~ 273 (360)
T 3ab1_A 214 NGTIDVYLETEVASIEESN--G-----VLTRVHLRSSDGSKWTVEAD-RLLILIGFKSNLGPLARWDL 273 (360)
T ss_dssp HTSEEEESSEEEEEEEEET--T-----EEEEEEEEETTCCEEEEECS-EEEECCCBCCSCGGGGGSSC
T ss_pred cCceEEEcCcCHHHhccCC--C-----ceEEEEEEecCCCeEEEeCC-EEEECCCCCCCHHHHHhhcc
Confidence 4689999999999998753 3 677887763 4555679999 69999996555566665554
No 188
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=96.70 E-value=0.0011 Score=73.25 Aligned_cols=36 Identities=22% Similarity=0.256 Sum_probs=32.8
Q ss_pred ccEEEECCChhHHHHHHHHhhc-CCCeEEEEecCCCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEI-KKWKVLLLEAGIEE 153 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~-~G~~VlVLEaG~~~ 153 (731)
.||||||+|++|+++|.+|++. +|.+|+|+|+++..
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~ 39 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATV 39 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCC
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 5899999999999999999996 58999999999754
No 189
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=96.69 E-value=0.0011 Score=76.91 Aligned_cols=37 Identities=38% Similarity=0.404 Sum_probs=34.0
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~ 153 (731)
..+||+|||+|++|+++|..|+++ |++|+|+|+.+..
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~-g~~v~~~e~~~~~ 142 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSF-GMDVTLLEARDRV 142 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHT-TCEEEEECSSSSS
T ss_pred CCCeEEEECcCHHHHHHHHHHHHC-CCeEEEEecCCCC
Confidence 368999999999999999999998 9999999998654
No 190
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.69 E-value=0.00099 Score=71.45 Aligned_cols=35 Identities=26% Similarity=0.410 Sum_probs=31.6
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~ 153 (731)
--||||||+|++|+++|.+|++. | +|+|+|+++..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~-g-~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQT-Y-EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTT-S-EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhhc-C-CEEEEECCCCC
Confidence 36999999999999999999998 8 99999998753
No 191
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=96.68 E-value=0.0085 Score=62.24 Aligned_cols=55 Identities=11% Similarity=0.128 Sum_probs=41.6
Q ss_pred CCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEeC---CEEEEEEeccEEEecccCCCchHHHh
Q psy7389 320 RKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFYK---KKLRRARAKKEVISSAGAINSPKILM 382 (731)
Q Consensus 320 ~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~~---g~~~~i~A~k~VVLAAGai~Tp~LLl 382 (731)
+.|++|++++.|++|..++ + ++.+|.+... +...++.++ .||+|+|.-..+.+|.
T Consensus 196 ~~gv~i~~~~~v~~i~~~~--~-----~v~~v~~~~~~~~g~~~~i~~D-~vv~a~G~~p~~~~~~ 253 (320)
T 1trb_A 196 NGNIILHTNRTLEEVTGDQ--M-----GVTGVRLRDTQNSDNIESLDVA-GLFVAIGHSPNTAIFE 253 (320)
T ss_dssp TSSEEEECSCEEEEEEECS--S-----SEEEEEEECCTTCCCCEEEECS-EEEECSCEEESCGGGT
T ss_pred cCCeEEEcCceeEEEEcCC--C-----ceEEEEEEeccCCCceEEEEcC-EEEEEeCCCCChHHhc
Confidence 5789999999999998653 3 5778887752 444679999 6999999765555543
No 192
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.68 E-value=0.0014 Score=76.98 Aligned_cols=38 Identities=26% Similarity=0.327 Sum_probs=34.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCC
Q psy7389 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (731)
Q Consensus 115 ~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~ 153 (731)
...+||+|||||++|+.+|..|++. |++|+|+|+.+..
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~-G~~Vtlie~~~~~ 424 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMES-GYTVHLTDTAEKI 424 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSST
T ss_pred cCCceEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCc
Confidence 3468999999999999999999999 9999999998643
No 193
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=96.67 E-value=0.00086 Score=74.90 Aligned_cols=35 Identities=11% Similarity=0.259 Sum_probs=32.8
Q ss_pred cccEEEECCChhHHHHHHHHhhcCC---CeEEEEecCCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKK---WKVLLLEAGIE 152 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G---~~VlVLEaG~~ 152 (731)
++||||||+|++|+++|.+|++. | .+|+|+|+.+.
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~-g~~~~~V~lie~~~~ 72 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTN-YGDANEIVVFDQNSN 72 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-HGGGSEEEEECSSSC
T ss_pred CCcEEEECCCHHHHHHHHHHHhc-CCCCCeEEEEECCCC
Confidence 58999999999999999999998 7 99999999874
No 194
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=96.66 E-value=0.0011 Score=72.20 Aligned_cols=34 Identities=15% Similarity=0.151 Sum_probs=31.6
Q ss_pred cEEEECCChhHHHHHHHHhh---cCCCeEEEEecCCCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSE---IKKWKVLLLEAGIEE 153 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~---~~G~~VlVLEaG~~~ 153 (731)
||||||||++|+++|.+|++ . |.+|+|||+.+..
T Consensus 3 ~VvIIGgG~aGl~aA~~L~~~~~~-g~~V~vie~~~~~ 39 (409)
T 3h8l_A 3 KVLVLGGRFGALTAAYTLKRLVGS-KADVKVINKSRFS 39 (409)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHGG-GSEEEEEESSSEE
T ss_pred eEEEECCCHHHHHHHHHHHhhCCC-CCeEEEEeCCCCc
Confidence 79999999999999999999 7 9999999998743
No 195
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.65 E-value=0.0015 Score=75.99 Aligned_cols=37 Identities=27% Similarity=0.352 Sum_probs=33.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~ 153 (731)
..+||||||||++|+.+|..|++. |++|+|+|+.+..
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~-g~~V~lie~~~~~ 408 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAAR-GHQVTLFDAHSEI 408 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCCC
Confidence 468999999999999999999998 9999999998643
No 196
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=96.62 E-value=0.0014 Score=72.20 Aligned_cols=37 Identities=32% Similarity=0.517 Sum_probs=33.4
Q ss_pred cccEEEECCChhHHHHHHHHhhc-CCCeEEEEecCCCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEI-KKWKVLLLEAGIEE 153 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~-~G~~VlVLEaG~~~ 153 (731)
.+||||||+|++|+++|.+|++. +|.+|+|+|+.++.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~ 40 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWV 40 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCcc
Confidence 47999999999999999999996 57899999999754
No 197
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.60 E-value=0.0011 Score=80.06 Aligned_cols=59 Identities=8% Similarity=0.019 Sum_probs=44.7
Q ss_pred CCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEe------CCEEEEEEeccEEEecccCCCchHHHhhcC
Q psy7389 320 RKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFY------KKKLRRARAKKEVISSAGAINSPKILMLSG 385 (731)
Q Consensus 320 ~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~------~g~~~~i~A~k~VVLAAGai~Tp~LLl~SG 385 (731)
+.|++|++++.|++|.-+++ + ++.+|.+.+ +|...++.++ .||+|+|-..+..++...|
T Consensus 328 ~~GV~v~~~~~v~~i~~~~~-~-----~v~~v~~~~~~~~~~~G~~~~i~~D-~Vv~a~G~~P~~~l~~~~~ 392 (965)
T 2gag_A 328 ADGVQVISGSVVVDTEADEN-G-----ELSAIVVAELDEARELGGTQRFEAD-VLAVAGGFNPVVHLHSQRQ 392 (965)
T ss_dssp HTTCCEEETEEEEEEEECTT-S-----CEEEEEEEEECTTCCEEEEEEEECS-EEEEECCEEECCHHHHHTT
T ss_pred hCCeEEEeCCEeEEEeccCC-C-----CEEEEEEEeccccCCCCceEEEEcC-EEEECCCcCcChHHHHhCC
Confidence 57999999999999986311 2 577888775 3445689999 6999999776767776554
No 198
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=96.60 E-value=0.0014 Score=72.08 Aligned_cols=36 Identities=28% Similarity=0.342 Sum_probs=32.8
Q ss_pred cccEEEECCChhHHHHHHHHhh---cCCCeEEEEecCCCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSE---IKKWKVLLLEAGIEE 153 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~---~~G~~VlVLEaG~~~ 153 (731)
..||||||||++|+++|.+|++ . |.+|+|+|+.+..
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~-g~~Vtlie~~~~~ 42 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGS-GHEVTLISANDYF 42 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGG-GSEEEEECSSSEE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCC-cCEEEEEeCCCCC
Confidence 3689999999999999999999 6 9999999998743
No 199
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=96.58 E-value=0.0014 Score=71.36 Aligned_cols=59 Identities=19% Similarity=0.273 Sum_probs=43.3
Q ss_pred ccHhhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEeCCEEEEEEeccEEEecccCCCchHHHhhcCCC
Q psy7389 312 FIRPIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIG 387 (731)
Q Consensus 312 ~L~~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~~g~~~~i~A~k~VVLAAGai~Tp~LLl~SGig 387 (731)
.+...++ +.|++|++++.|++|. + + +|.+. +| .++.++ .||+|+|...+..+|..+|+.
T Consensus 192 ~l~~~l~-~~GV~i~~~~~v~~i~-~---~--------~v~~~-~g--~~i~~D-~vi~a~G~~p~~~l~~~~gl~ 250 (408)
T 2gqw_A 192 FVARYHA-AQGVDLRFERSVTGSV-D---G--------VVLLD-DG--TRIAAD-MVVVGIGVLANDALARAAGLA 250 (408)
T ss_dssp HHHHHHH-HTTCEEEESCCEEEEE-T---T--------EEEET-TS--CEEECS-EEEECSCEEECCHHHHHHTCC
T ss_pred HHHHHHH-HcCcEEEeCCEEEEEE-C---C--------EEEEC-CC--CEEEcC-EEEECcCCCccHHHHHhCCCC
Confidence 4555555 6899999999999998 3 1 23333 34 268899 699999987676788888775
No 200
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.57 E-value=0.00086 Score=74.99 Aligned_cols=60 Identities=12% Similarity=0.065 Sum_probs=43.2
Q ss_pred hhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEeCCEEEEEEeccEEEecccCCCchHHHhhcCCC
Q psy7389 315 PIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIG 387 (731)
Q Consensus 315 ~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~~g~~~~i~A~k~VVLAAGai~Tp~LLl~SGig 387 (731)
..++ +.|++|++++.|++|..++ ++.+|.. .++ .++.++ .||+|+|...+..|+..+|+.
T Consensus 265 ~~l~-~~GV~v~~~~~v~~i~~~~--------~v~~v~~-~~g--~~i~aD-~Vv~a~G~~p~~~l~~~~g~~ 324 (493)
T 1y56_A 265 QELE-RWGIDYVHIPNVKRVEGNE--------KVERVID-MNN--HEYKVD-ALIFADGRRPDINPITQAGGK 324 (493)
T ss_dssp HHHH-HHTCEEEECSSEEEEECSS--------SCCEEEE-TTC--CEEECS-EEEECCCEEECCHHHHHTTCC
T ss_pred HHHH-hCCcEEEeCCeeEEEecCC--------ceEEEEe-CCC--eEEEeC-EEEECCCcCcCchHHHhcCCC
Confidence 3444 5799999999999998442 2344543 233 368999 699999987777788887763
No 201
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=96.57 E-value=0.019 Score=59.43 Aligned_cols=59 Identities=19% Similarity=0.190 Sum_probs=46.3
Q ss_pred CCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEe--CCEEEEEEeccEEEecccCCCchHHHhhcCCC
Q psy7389 320 RKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINSPKILMLSGIG 387 (731)
Q Consensus 320 ~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~--~g~~~~i~A~k~VVLAAGai~Tp~LLl~SGig 387 (731)
+.|+++++++.|++|..+ + ++.+|.+.+ +|+..++.++ .||+|+|...+..+|..+|+.
T Consensus 202 ~~gv~~~~~~~v~~i~~~---~-----~~~~v~~~~~~~g~~~~~~~D-~vv~a~G~~p~~~~~~~~g~~ 262 (323)
T 3f8d_A 202 KPNVEFVLNSVVKEIKGD---K-----VVKQVVVENLKTGEIKELNVN-GVFIEIGFDPPTDFAKSNGIE 262 (323)
T ss_dssp CTTEEEECSEEEEEEEES---S-----SEEEEEEEETTTCCEEEEECS-EEEECCCEECCHHHHHHTTCC
T ss_pred CCCcEEEeCCEEEEEecc---C-----ceeEEEEEECCCCceEEEEcC-EEEEEECCCCChhHHhhcCee
Confidence 458999999999999865 2 466787776 3666679999 699999987776788877764
No 202
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=96.56 E-value=0.013 Score=61.12 Aligned_cols=55 Identities=13% Similarity=0.131 Sum_probs=42.9
Q ss_pred CCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEe--CCEEEEEEeccEEEecccCCCchHHHh
Q psy7389 320 RKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINSPKILM 382 (731)
Q Consensus 320 ~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~--~g~~~~i~A~k~VVLAAGai~Tp~LLl 382 (731)
..|++|++++.|++|..++ + ++.+|.+.+ ++...++.++ .||+|+|...++.+|.
T Consensus 221 ~~gv~i~~~~~v~~i~~~~--~-----~~~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~~~ 277 (338)
T 3itj_A 221 NEKIEILYNTVALEAKGDG--K-----LLNALRIKNTKKNEETDLPVS-GLFYAIGHTPATKIVA 277 (338)
T ss_dssp CTTEEEECSEEEEEEEESS--S-----SEEEEEEEETTTTEEEEEECS-EEEECSCEEECCGGGB
T ss_pred cCCeEEeecceeEEEEccc--C-----cEEEEEEEECCCCceEEEEeC-EEEEEeCCCCChhHhh
Confidence 4589999999999998763 3 577888876 4666789999 6999999766665553
No 203
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=96.56 E-value=0.0013 Score=73.02 Aligned_cols=64 Identities=17% Similarity=0.190 Sum_probs=45.7
Q ss_pred hccHhhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEeCCEEEEEEeccEEEecccCCCchHHHhhcCCC
Q psy7389 311 AFIRPIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIG 387 (731)
Q Consensus 311 ~~L~~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~~g~~~~i~A~k~VVLAAGai~Tp~LLl~SGig 387 (731)
..+...++ +.|++|++++.|++|..++ + +++ |.+.+ ++ ++.++ .||+|+|...++.|+..+|+.
T Consensus 206 ~~l~~~l~-~~GV~i~~~~~v~~i~~~~--~-----~v~-v~~~~-g~--~i~aD-~Vv~a~G~~p~~~l~~~~gl~ 269 (472)
T 3iwa_A 206 QMLRHDLE-KNDVVVHTGEKVVRLEGEN--G-----KVA-RVITD-KR--TLDAD-LVILAAGVSPNTQLARDAGLE 269 (472)
T ss_dssp HHHHHHHH-HTTCEEECSCCEEEEEESS--S-----BEE-EEEES-SC--EEECS-EEEECSCEEECCHHHHHHTCC
T ss_pred HHHHHHHH-hcCCEEEeCCEEEEEEccC--C-----eEE-EEEeC-CC--EEEcC-EEEECCCCCcCHHHHHhCCcc
Confidence 34555555 6899999999999998642 2 343 44443 33 68899 699999987666777777764
No 204
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=96.55 E-value=0.0074 Score=66.75 Aligned_cols=33 Identities=24% Similarity=0.338 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 202 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRL-GAEVTLIEYMP 202 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCeEEEEEcCC
Confidence 3699999999999999999998 99999999974
No 205
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=96.55 E-value=0.0018 Score=76.66 Aligned_cols=38 Identities=37% Similarity=0.398 Sum_probs=34.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCC
Q psy7389 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (731)
Q Consensus 115 ~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~ 153 (731)
...+||+|||+|++|+++|++|+++ |++|+|||+....
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~-g~~v~v~E~~~~~ 313 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSF-GMDVTLLEARDRV 313 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHC-CCcEEEEEecCcC
Confidence 3468999999999999999999998 9999999998654
No 206
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=96.55 E-value=0.018 Score=59.54 Aligned_cols=57 Identities=16% Similarity=0.058 Sum_probs=43.6
Q ss_pred CCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEe--CCEEEEEEeccEEEecccCCCchHHHhhc
Q psy7389 320 RKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINSPKILMLS 384 (731)
Q Consensus 320 ~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~--~g~~~~i~A~k~VVLAAGai~Tp~LLl~S 384 (731)
..|++|++++.|++|..++ + ++.+|.+.. +|...++.++ .||+|+|...+..+|..+
T Consensus 191 ~~gv~v~~~~~v~~i~~~~--~-----~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~~~ 249 (311)
T 2q0l_A 191 NDKIEFLTPYVVEEIKGDA--S-----GVSSLSIKNTATNEKRELVVP-GFFIFVGYDVNNAVLKQE 249 (311)
T ss_dssp CTTEEEETTEEEEEEEEET--T-----EEEEEEEEETTTCCEEEEECS-EEEECSCEEECCGGGBCT
T ss_pred CCCeEEEeCCEEEEEECCC--C-----cEeEEEEEecCCCceEEEecC-EEEEEecCccChhhhhcc
Confidence 3689999999999998652 3 667788775 5666689999 699999976666666544
No 207
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=96.53 E-value=0.0016 Score=72.39 Aligned_cols=62 Identities=23% Similarity=0.259 Sum_probs=44.2
Q ss_pred ccHhhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEeCCEEEEEEeccEEEecccCCCchHHHhhcCCC
Q psy7389 312 FIRPIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIG 387 (731)
Q Consensus 312 ~L~~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~~g~~~~i~A~k~VVLAAGai~Tp~LLl~SGig 387 (731)
.+...++ +.|++|++++.|++|..+ + ++.+|.. ++ .++.++ .||+|+|...++.+|..+|+.
T Consensus 232 ~l~~~l~-~~Gv~i~~~~~v~~i~~~---~-----~v~~v~~--~~--~~i~~D-~vi~a~G~~p~~~~l~~~g~~ 293 (480)
T 3cgb_A 232 YIYKEAD-KHHIEILTNENVKAFKGN---E-----RVEAVET--DK--GTYKAD-LVLVSVGVKPNTDFLEGTNIR 293 (480)
T ss_dssp HHHHHHH-HTTCEEECSCCEEEEEES---S-----BEEEEEE--TT--EEEECS-EEEECSCEEESCGGGTTSCCC
T ss_pred HHHHHHH-HcCcEEEcCCEEEEEEcC---C-----cEEEEEE--CC--CEEEcC-EEEECcCCCcChHHHHhCCcc
Confidence 3445555 689999999999999854 2 4444543 33 268999 699999987666677766653
No 208
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=96.52 E-value=0.012 Score=63.21 Aligned_cols=33 Identities=27% Similarity=0.458 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-+++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 178 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSSG-GYQLDVVAPCE 178 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCeEEEEecCc
Confidence 4699999999999999999998 99999999975
No 209
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=96.48 E-value=0.0017 Score=71.48 Aligned_cols=36 Identities=17% Similarity=0.263 Sum_probs=32.2
Q ss_pred ccEEEECCChhHHHHHHHHhhc-CCCeEEEEecCCCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEI-KKWKVLLLEAGIEE 153 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~-~G~~VlVLEaG~~~ 153 (731)
.||||||+|++|+++|.+|++. +|.+|+|+|+.+..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFI 37 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCcc
Confidence 3899999999999999999985 58999999998743
No 210
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.48 E-value=0.01 Score=65.43 Aligned_cols=33 Identities=27% Similarity=0.395 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 203 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANF-GTKVTILEGAG 203 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCcEEEEEcCC
Confidence 4799999999999999999998 99999999874
No 211
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=96.48 E-value=0.011 Score=65.56 Aligned_cols=33 Identities=27% Similarity=0.303 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 216 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRL-GSKVTVVEFQP 216 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHc-CCEEEEEEeCC
Confidence 4699999999999999999998 99999999985
No 212
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=96.47 E-value=0.0053 Score=66.70 Aligned_cols=57 Identities=11% Similarity=0.021 Sum_probs=42.9
Q ss_pred CCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEeCCEEEEEEeccEEEecccCCCchHHHhhcCCCC
Q psy7389 320 RKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGP 388 (731)
Q Consensus 320 ~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~~g~~~~i~A~k~VVLAAGai~Tp~LLl~SGig~ 388 (731)
+.|++|++++.|++|..++ ++.+|.+.+ |+ ++.++ .||+|+|...+..+|..+|+.-
T Consensus 197 ~~GV~i~~~~~v~~i~~~~--------~~~~v~~~d-g~--~i~aD-~Vv~a~G~~p~~~l~~~~gl~~ 253 (410)
T 3ef6_A 197 ELGVQVELGTGVVGFSGEG--------QLEQVMASD-GR--SFVAD-SALICVGAEPADQLARQAGLAC 253 (410)
T ss_dssp HHTCEEECSCCEEEEECSS--------SCCEEEETT-SC--EEECS-EEEECSCEEECCHHHHHTTCCB
T ss_pred HCCCEEEeCCEEEEEeccC--------cEEEEEECC-CC--EEEcC-EEEEeeCCeecHHHHHhCCCcc
Confidence 4689999999999998542 344565544 32 68899 6999999887778888887753
No 213
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=96.45 E-value=0.015 Score=60.80 Aligned_cols=58 Identities=21% Similarity=0.164 Sum_probs=43.1
Q ss_pred CCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEe--CCEEEEEEeccEEEecccCCCchHHHhhcCC
Q psy7389 320 RKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINSPKILMLSGI 386 (731)
Q Consensus 320 ~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~--~g~~~~i~A~k~VVLAAGai~Tp~LLl~SGi 386 (731)
+.|+++++++.|++|..+ + ++.+|.+.. ++...++.++ .||+|+|.-....+|..+|+
T Consensus 203 ~~gv~v~~~~~v~~i~~~--~------~~~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~~~~~ 262 (335)
T 2zbw_A 203 EGRLEVLTPYELRRVEGD--E------RVRWAVVFHNQTQEELALEVD-AVLILAGYITKLGPLANWGL 262 (335)
T ss_dssp TTSSEEETTEEEEEEEES--S------SEEEEEEEETTTCCEEEEECS-EEEECCCEEEECGGGGGSCC
T ss_pred cCCeEEecCCcceeEccC--C------CeeEEEEEECCCCceEEEecC-EEEEeecCCCCchHhhhcce
Confidence 568999999999999864 2 456777763 4555679999 69999996655556665554
No 214
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=96.42 E-value=0.02 Score=59.73 Aligned_cols=60 Identities=12% Similarity=0.169 Sum_probs=43.3
Q ss_pred CCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEe--CCEEEEEEeccEEEecccCCCchHHHhhcCC
Q psy7389 320 RKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINSPKILMLSGI 386 (731)
Q Consensus 320 ~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~--~g~~~~i~A~k~VVLAAGai~Tp~LLl~SGi 386 (731)
+.|++|++++.|++|..++++. ++.+|.+.. ++...++.++ .||+|+|...+..+|. +++
T Consensus 207 ~~gv~i~~~~~v~~i~~~~~~~-----~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~~~-~~l 268 (333)
T 1vdc_A 207 NPKIDVIWNSSVVEAYGDGERD-----VLGGLKVKNVVTGDVSDLKVS-GLFFAIGHEPATKFLD-GGV 268 (333)
T ss_dssp CTTEEEECSEEEEEEEESSSSS-----SEEEEEEEETTTCCEEEEECS-EEEECSCEEESCGGGT-TSS
T ss_pred CCCeeEecCCceEEEeCCCCcc-----ceeeEEEEecCCCceEEEecC-EEEEEeCCccchHHhh-ccc
Confidence 4689999999999998653221 355677765 4555689999 6999999766665553 444
No 215
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=96.38 E-value=0.0084 Score=65.62 Aligned_cols=33 Identities=24% Similarity=0.381 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.++|||+|..|+-+|..|++. |.+|.|+|+.+
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~-G~~Vtlv~~~~ 182 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKA-NMHVTLLDTAA 182 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCEEEEEEeCC
Confidence 4699999999999999999998 99999999875
No 216
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=96.34 E-value=0.0026 Score=72.76 Aligned_cols=37 Identities=19% Similarity=0.421 Sum_probs=33.5
Q ss_pred cccEEEECCChhHHHHHHHHhhc-CCCeEEEEecCCCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEI-KKWKVLLLEAGIEE 153 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~-~G~~VlVLEaG~~~ 153 (731)
..||||||||++|+++|.+|++. +|.+|+|+|+.+..
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~ 73 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYI 73 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 47899999999999999999996 58999999999764
No 217
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=96.33 E-value=0.022 Score=59.31 Aligned_cols=55 Identities=9% Similarity=0.099 Sum_probs=41.8
Q ss_pred CCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEe--CCEEEEEEeccEEEecccCCCchHHHhh
Q psy7389 320 RKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINSPKILML 383 (731)
Q Consensus 320 ~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~--~g~~~~i~A~k~VVLAAGai~Tp~LLl~ 383 (731)
..|++|++++.|++|..+ + ++.+|.+.. +|...++.++ .||+|+|...+..+|..
T Consensus 200 ~~gv~i~~~~~v~~i~~~---~-----~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~~ 256 (325)
T 2q7v_A 200 NPKMKFIWDTAVEEIQGA---D-----SVSGVKLRNLKTGEVSELATD-GVFIFIGHVPNTAFVKD 256 (325)
T ss_dssp CTTEEEECSEEEEEEEES---S-----SEEEEEEEETTTCCEEEEECS-EEEECSCEEESCGGGTT
T ss_pred cCCceEecCCceEEEccC---C-----cEEEEEEEECCCCcEEEEEcC-EEEEccCCCCChHHHhh
Confidence 468999999999999864 2 466888874 5666689999 69999996655556543
No 218
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.31 E-value=0.0026 Score=70.38 Aligned_cols=36 Identities=25% Similarity=0.309 Sum_probs=33.0
Q ss_pred cccEEEECCChhHHHHHHHHhhcCC--CeEEEEecCCCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKK--WKVLLLEAGIEE 153 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G--~~VlVLEaG~~~ 153 (731)
.+||||||+|++|+.+|..|++. | .+|+|+|+.+..
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~-g~~~~V~vie~~~~~ 43 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKH-HSRAHVDIYEKQLVP 43 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-CSSCEEEEECSSSSS
T ss_pred CceEEEECcCHHHHHHHHHHHhc-CCCCCEEEEeCCCcC
Confidence 58999999999999999999998 7 999999998643
No 219
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=96.29 E-value=0.024 Score=58.53 Aligned_cols=54 Identities=17% Similarity=0.223 Sum_probs=41.8
Q ss_pred CCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEe--CCEEEEEEeccEEEecccCCCchHHHh
Q psy7389 321 KNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINSPKILM 382 (731)
Q Consensus 321 ~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~--~g~~~~i~A~k~VVLAAGai~Tp~LLl 382 (731)
.|++|++++.|++|..++ + ++.+|.+.+ +++..++.++ .||+|+|...++.+|.
T Consensus 193 ~gv~v~~~~~v~~i~~~~--~-----~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~ 248 (310)
T 1fl2_A 193 KNVDIILNAQTTEVKGDG--S-----KVVGLEYRDRVSGDIHNIELA-GIFVQIGLLPNTNWLE 248 (310)
T ss_dssp TTEEEESSEEEEEEEESS--S-----SEEEEEEEETTTCCEEEEECS-EEEECSCEEESCGGGT
T ss_pred CCeEEecCCceEEEEcCC--C-----cEEEEEEEECCCCcEEEEEcC-EEEEeeCCccCchHHh
Confidence 589999999999998652 3 577888876 3566789999 6999999766656654
No 220
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=96.25 E-value=0.0073 Score=67.08 Aligned_cols=34 Identities=32% Similarity=0.431 Sum_probs=31.4
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.-+++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 219 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVEL-GKKVRMIERND 219 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHT-TCEEEEECCGG
T ss_pred CCeEEEECCCHHHHHHHHHHHhc-CCeEEEEEeCC
Confidence 45799999999999999999998 99999999974
No 221
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.24 E-value=0.0028 Score=77.19 Aligned_cols=37 Identities=19% Similarity=0.307 Sum_probs=33.4
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCC-eEEEEecCCCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGIEE 153 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~-~VlVLEaG~~~ 153 (731)
..+||+|||||++|+++|.+|++. |+ +|+|+|+.+..
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~-G~~~Vtv~E~~~~~ 223 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARL-GYSDITIFEKQEYV 223 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHT-TCCCEEEEESSSSC
T ss_pred CCCEEEEECccHHHHHHHHHHHhc-CCCcEEEEeCCCCC
Confidence 368999999999999999999999 99 79999997543
No 222
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=96.06 E-value=0.012 Score=65.35 Aligned_cols=33 Identities=24% Similarity=0.335 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~ 218 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGL-GSETHLVIRGE 218 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCceEEEEeCC
Confidence 3699999999999999999998 99999999875
No 223
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.05 E-value=0.0034 Score=69.28 Aligned_cols=36 Identities=22% Similarity=0.275 Sum_probs=32.5
Q ss_pred cccEEEECCChhHHHHHHHHhh-c-C----CCeEEEEecCCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSE-I-K----KWKVLLLEAGIE 152 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~-~-~----G~~VlVLEaG~~ 152 (731)
.+||||||||++|+.+|..|++ . + |.+|+|+|+.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~ 44 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT 44 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCC
Confidence 5899999999999999999998 5 3 899999999864
No 224
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=96.03 E-value=0.017 Score=63.71 Aligned_cols=33 Identities=27% Similarity=0.267 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 204 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNY-GVDVTIVEFLP 204 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred CeEEEECCcHHHHHHHHHHHHc-CCeEEEEEcCC
Confidence 3699999999999999999998 99999999984
No 225
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=96.01 E-value=0.0042 Score=70.47 Aligned_cols=36 Identities=22% Similarity=0.370 Sum_probs=32.3
Q ss_pred ccEEEECCChhHHHHHHHHhhc-CCCeEEEEecCCCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEI-KKWKVLLLEAGIEE 153 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~-~G~~VlVLEaG~~~ 153 (731)
.||||||+|++|+++|.+|++. +|.+|+|+|+.+..
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 3799999999999999999996 47899999999764
No 226
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=96.00 E-value=0.0046 Score=67.21 Aligned_cols=33 Identities=24% Similarity=0.335 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCe--EEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWK--VLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~--VlVLEaG~ 151 (731)
.||||||+|++|+++|.+|++. |.+ |+|+|+.+
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~-g~~~~V~li~~~~ 37 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAE-GFEGRISLIGDEP 37 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCSEEEEEECSS
T ss_pred CCEEEEcccHHHHHHHHHHHcc-CcCCeEEEEECCC
Confidence 4899999999999999999998 877 99999986
No 227
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=95.98 E-value=0.004 Score=71.93 Aligned_cols=36 Identities=22% Similarity=0.375 Sum_probs=33.0
Q ss_pred cccEEEECCChhHHHHHHHHhhcCC--------CeEEEEecCC-CC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKK--------WKVLLLEAGI-EE 153 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G--------~~VlVLEaG~-~~ 153 (731)
..+|+|||+|++|+++|++|+++ | ++|+|+|+.+ ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~-g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRL-AATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH-HTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CcccccCCCceEEEEeccCccc
Confidence 47899999999999999999998 8 9999999986 44
No 228
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=95.95 E-value=0.02 Score=63.01 Aligned_cols=33 Identities=24% Similarity=0.293 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.++|||+|.+|+-+|..|++. |.+|.|+|+++
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~-g~~V~lv~~~~ 200 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRL-GAEVIVLEYMD 200 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCEEEEEecCC
Confidence 3699999999999999999998 99999999975
No 229
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=95.93 E-value=0.026 Score=62.50 Aligned_cols=33 Identities=24% Similarity=0.243 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 211 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRL-GADVTAVEFLG 211 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHc-CCEEEEEeccC
Confidence 3699999999999999999998 99999999975
No 230
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=95.84 E-value=0.029 Score=61.99 Aligned_cols=33 Identities=21% Similarity=0.325 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 207 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARL-GAEVTVVEFAP 207 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHh-CCEEEEEecCC
Confidence 3699999999999999999998 99999999985
No 231
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=95.83 E-value=0.006 Score=65.89 Aligned_cols=60 Identities=10% Similarity=-0.027 Sum_probs=41.5
Q ss_pred hHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEeCCEEEEEEeccEEEecccCCCchHHHhhcCCCCc
Q psy7389 316 IRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGPK 389 (731)
Q Consensus 316 a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~~g~~~~i~A~k~VVLAAGai~Tp~LLl~SGig~~ 389 (731)
..+ +.|+++++++.|..+..+.... .|+. .+|+ ++.++ .||+++|. ..+.++..||+.+.
T Consensus 211 ~l~-~~gi~v~~~~~v~~v~~~~~~~--------~v~~-~~g~--~i~~D-~vi~~~g~-~~~~~~~~~gl~~~ 270 (401)
T 3vrd_B 211 GTE-NALIEWHPGPDAAVVKTDTEAM--------TVET-SFGE--TFKAA-VINLIPPQ-RAGKIAQSASLTND 270 (401)
T ss_dssp TST-TCSEEEECTTTTCEEEEETTTT--------EEEE-TTSC--EEECS-EEEECCCE-EECHHHHHTTCCCT
T ss_pred HHH-hcCcEEEeCceEEEEEecccce--------EEEc-CCCc--EEEee-EEEEecCc-CCchhHhhcccccc
Confidence 344 6799999999999988764322 2333 2333 68898 69998884 44578888988653
No 232
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=95.82 E-value=0.046 Score=56.24 Aligned_cols=56 Identities=18% Similarity=0.200 Sum_probs=42.9
Q ss_pred CCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEe-CCEEEEEEeccEEEecccCCCchHHHhh
Q psy7389 320 RKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFY-KKKLRRARAKKEVISSAGAINSPKILML 383 (731)
Q Consensus 320 ~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~-~g~~~~i~A~k~VVLAAGai~Tp~LLl~ 383 (731)
+.|++|++++.|++|..++ + ++.+|.+.. +|...++.++ .||+|+|...++.++..
T Consensus 195 ~~gv~~~~~~~v~~i~~~~--~-----~~~~v~~~~~~g~~~~~~~D-~vv~a~G~~p~~~~~~~ 251 (315)
T 3r9u_A 195 NEKIELITSASVDEVYGDK--M-----GVAGVKVKLKDGSIRDLNVP-GIFTFVGLNVRNEILKQ 251 (315)
T ss_dssp CTTEEEECSCEEEEEEEET--T-----EEEEEEEECTTSCEEEECCS-CEEECSCEEECCGGGBC
T ss_pred cCCeEEEeCcEEEEEEcCC--C-----cEEEEEEEcCCCCeEEeecC-eEEEEEcCCCCchhhhc
Confidence 5789999999999998663 3 677887763 4555689999 69999997666655543
No 233
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=95.80 E-value=0.019 Score=62.19 Aligned_cols=34 Identities=26% Similarity=0.316 Sum_probs=31.4
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.-.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 178 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTA-GVHVSLVETQP 178 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhC-CCEEEEEEeCC
Confidence 34799999999999999999998 99999999985
No 234
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=95.75 E-value=0.048 Score=60.64 Aligned_cols=33 Identities=21% Similarity=0.237 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~ 207 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRL-GVIVKVFGRSG 207 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHT-TCEEEEECCTT
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCeEEEEEECC
Confidence 3599999999999999999998 99999999985
No 235
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=95.68 E-value=0.045 Score=61.35 Aligned_cols=54 Identities=17% Similarity=0.218 Sum_probs=42.0
Q ss_pred CCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEe--CCEEEEEEeccEEEecccCCCchHHHh
Q psy7389 321 KNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINSPKILM 382 (731)
Q Consensus 321 ~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~--~g~~~~i~A~k~VVLAAGai~Tp~LLl 382 (731)
.|++|++++.|++|.-++ + ++++|.+.+ +|...++.++ .||+|+|...+..+|.
T Consensus 404 ~gV~v~~~~~v~~i~~~~--~-----~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~pn~~~l~ 459 (521)
T 1hyu_A 404 KNVDIILNAQTTEVKGDG--S-----KVVGLEYRDRVSGDIHSVALA-GIFVQIGLLPNTHWLE 459 (521)
T ss_dssp TTEEEECSEEEEEEEECS--S-----SEEEEEEEETTTCCEEEEECS-EEEECCCEEESCGGGT
T ss_pred CCcEEEeCCEEEEEEcCC--C-----cEEEEEEEeCCCCceEEEEcC-EEEECcCCCCCchHHh
Confidence 589999999999998652 3 577888876 4666789999 6999999765555554
No 236
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=95.66 E-value=0.0072 Score=66.29 Aligned_cols=59 Identities=17% Similarity=0.166 Sum_probs=41.9
Q ss_pred ccHhhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEeCCEEEEEEeccEEEecccCCCchHHHhhcCCC
Q psy7389 312 FIRPIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIG 387 (731)
Q Consensus 312 ~L~~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~~g~~~~i~A~k~VVLAAGai~Tp~LLl~SGig 387 (731)
.+....+ +.|+++++++.|+++. +. . |.+. +++ ++.++ .||+|+|...+..+|..+|+.
T Consensus 193 ~~~~~l~-~~gV~i~~~~~v~~~~----~~-----~---v~~~-~g~--~~~~D-~vl~a~G~~Pn~~~~~~~gl~ 251 (437)
T 4eqs_A 193 PILDELD-KREIPYRLNEEINAIN----GN-----E---ITFK-SGK--VEHYD-MIIEGVGTHPNSKFIESSNIK 251 (437)
T ss_dssp HHHHHHH-HTTCCEEESCCEEEEE----TT-----E---EEET-TSC--EEECS-EEEECCCEEESCGGGTTSSCC
T ss_pred HHHHHhh-ccceEEEeccEEEEec----CC-----e---eeec-CCe--EEeee-eEEEEeceecCcHHHHhhhhh
Confidence 3555555 6899999999999986 22 2 3332 333 57898 699999977666777777764
No 237
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.62 E-value=0.018 Score=63.67 Aligned_cols=33 Identities=24% Similarity=0.348 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtli~~~~ 210 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRI-GSEVTVVEFAS 210 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHH-TCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCcEEEEEcCC
Confidence 3699999999999999999998 99999999974
No 238
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=95.60 E-value=0.043 Score=60.93 Aligned_cols=33 Identities=24% Similarity=0.299 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 231 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARL-GAKVTVVEFLD 231 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCEEEEEeccc
Confidence 3699999999999999999999 99999999875
No 239
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=95.60 E-value=0.032 Score=61.32 Aligned_cols=33 Identities=30% Similarity=0.423 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 182 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQ-NYNVNLIDGHE 182 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSS
T ss_pred CeEEEECcCHHHHHHHHHHHhc-CCEEEEEEcCC
Confidence 3699999999999999999998 99999999874
No 240
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=95.57 E-value=0.077 Score=58.84 Aligned_cols=31 Identities=16% Similarity=0.202 Sum_probs=29.4
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
.++|||+|..|+-+|..|++. |.+|.++|+.
T Consensus 187 ~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~ 217 (488)
T 3dgz_A 187 KTLVVGASYVALECAGFLTGI-GLDTTVMMRS 217 (488)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred eEEEECCCHHHHHHHHHHHHc-CCceEEEEcC
Confidence 599999999999999999998 9999999986
No 241
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=95.46 E-value=0.044 Score=60.79 Aligned_cols=33 Identities=21% Similarity=0.248 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.++|||+|..|+-+|..|++. |.+|.|+|+.+
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~-G~~Vtlv~~~~ 218 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTL-GSRLDVVEMMD 218 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHH-TCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCeEEEEEECC
Confidence 4699999999999999999999 99999999875
No 242
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=95.45 E-value=0.043 Score=60.48 Aligned_cols=32 Identities=31% Similarity=0.312 Sum_probs=30.3
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 168 ~vvVvGgG~~g~e~A~~l~~~-G~~Vtlv~~~~ 199 (463)
T 2r9z_A 168 RVAIIGAGYIGIELAGLLRSF-GSEVTVVALED 199 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhc-CCEEEEEEcCC
Confidence 699999999999999999998 99999999874
No 243
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=95.44 E-value=0.045 Score=60.93 Aligned_cols=33 Identities=30% Similarity=0.271 Sum_probs=28.5
Q ss_pred cEEEECCChhHHHHHHHHhhc---CCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEI---KKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~---~G~~VlVLEaG~ 151 (731)
.++|||+|..|+-+|..|++. .|.+|+++++.+
T Consensus 182 ~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~ 217 (493)
T 1m6i_A 182 SITIIGGGFLGSELACALGRKARALGTEVIQLFPEK 217 (493)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCc
Confidence 599999999999999999872 278999999864
No 244
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=95.43 E-value=0.047 Score=60.28 Aligned_cols=34 Identities=21% Similarity=0.271 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.++|||+|..|+-+|..|++..|.+|.++|+++
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~ 193 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELAD 193 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccC
Confidence 4699999999999999999984388999999875
No 245
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.42 E-value=0.061 Score=59.89 Aligned_cols=33 Identities=18% Similarity=0.271 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~ 209 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRL-GIDSYIFARGN 209 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTT-TCEEEEECSSS
T ss_pred CeEEEECChHHHHHHHHHHHHc-CCeEEEEecCC
Confidence 3699999999999999999998 99999999975
No 246
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=95.42 E-value=0.03 Score=58.61 Aligned_cols=33 Identities=24% Similarity=0.276 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.++|||+|..|+-+|..|++. |.+|.++++++
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~-g~~V~l~~~~~ 188 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRF-ARSVTLVHRRD 188 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTT-CSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHh-CCeEEEEEcCC
Confidence 4699999999999999999998 99999999874
No 247
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=95.34 E-value=0.01 Score=66.34 Aligned_cols=35 Identities=14% Similarity=0.301 Sum_probs=31.9
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~ 152 (731)
...|||||||++|+.+|.+|++. +++|+|||+.++
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~-~~~VtLId~~~~ 76 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTK-KYNVSIISPRSY 76 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTT-TCEEEEEESSSE
T ss_pred CCCEEEECCcHHHHHHHHHhhhC-CCcEEEECCCCC
Confidence 45699999999999999999998 999999999764
No 248
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=95.30 E-value=0.09 Score=58.21 Aligned_cols=59 Identities=10% Similarity=0.036 Sum_probs=41.4
Q ss_pred CCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEeC--CEEEEEEeccEEEecccCCCchHHH--hhcCC
Q psy7389 320 RKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFYK--KKLRRARAKKEVISSAGAINSPKIL--MLSGI 386 (731)
Q Consensus 320 ~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~~--g~~~~i~A~k~VVLAAGai~Tp~LL--l~SGi 386 (731)
+.|++|++++.|++|..++++ .+ .|.+.++ +...++.++ .||+|+|-.....+| ..+|+
T Consensus 239 ~~Gv~i~~~~~v~~i~~~~~~------~~-~v~~~~~~~~~~~~~~~D-~vi~a~G~~p~~~~l~l~~~gl 301 (483)
T 3dgh_A 239 ERGIPFLRKTVPLSVEKQDDG------KL-LVKYKNVETGEESEDVYD-TVLWAIGRKGLVDDLNLPNAGV 301 (483)
T ss_dssp HTTCCEEETEEEEEEEECTTS------CE-EEEEEETTTCCEEEEEES-EEEECSCEEECCGGGTGGGTTC
T ss_pred hCCCEEEeCCEEEEEEEcCCC------cE-EEEEecCCCCceeEEEcC-EEEECcccccCcCcCCchhcCc
Confidence 468999999999999875422 22 3555553 455689999 699999976665555 44454
No 249
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=95.28 E-value=0.074 Score=58.81 Aligned_cols=32 Identities=28% Similarity=0.270 Sum_probs=30.2
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 189 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 220 (478)
T 3dk9_A 189 RSVIVGAGYIAVEMAGILSAL-GSKTSLMIRHD 220 (478)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHHc-CCeEEEEEeCC
Confidence 599999999999999999998 99999999874
No 250
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=95.27 E-value=0.064 Score=60.61 Aligned_cols=32 Identities=25% Similarity=0.344 Sum_probs=30.4
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.++|||+|..|+-+|..|++. |.+|.++|+++
T Consensus 153 ~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 184 (565)
T 3ntd_A 153 HATVVGGGFIGLEMMESLHHL-GIKTTLLELAD 184 (565)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred EEEEECCCHHHHHHHHHHHhc-CCcEEEEEcCC
Confidence 699999999999999999998 99999999974
No 251
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=95.23 E-value=0.067 Score=59.10 Aligned_cols=33 Identities=30% Similarity=0.274 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.++|||+|..|+-+|..|++. |.+|.++|+++
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 213 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARL-GAEVTVLEAMD 213 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCcEEEEecCC
Confidence 3699999999999999999998 99999999974
No 252
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=95.20 E-value=0.015 Score=62.53 Aligned_cols=36 Identities=19% Similarity=0.208 Sum_probs=32.1
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~ 153 (731)
..-|||||+|++|+.+|.+|+.. +.+|+|+|+.+..
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~-~~~itlie~~~~~ 44 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGK-CDDITMINSEKYL 44 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTT-CSCEEEECSSSSC
T ss_pred CCCEEEEcCcHHHHHHHHHHhCC-CCEEEEEECCCCC
Confidence 56699999999999999999665 9999999998754
No 253
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=95.17 E-value=0.082 Score=54.77 Aligned_cols=58 Identities=12% Similarity=0.108 Sum_probs=43.3
Q ss_pred CCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEe--CCEEEEEEeccEEEecccCCCchHHHhhcCCC
Q psy7389 321 KNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFY--KKKLRRARAKKEVISSAGAINSPKILMLSGIG 387 (731)
Q Consensus 321 ~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~--~g~~~~i~A~k~VVLAAGai~Tp~LLl~SGig 387 (731)
.|+++++++.|++|..++ .+.+|.+.+ ++...++.++ .||+|+|...++.+|..+|+.
T Consensus 202 ~gv~~~~~~~v~~i~~~~--------~~~~v~~~~~~~g~~~~~~~D-~vv~a~G~~p~~~~~~~~~~~ 261 (332)
T 3lzw_A 202 SKVNVLTPFVPAELIGED--------KIEQLVLEEVKGDRKEILEID-DLIVNYGFVSSLGPIKNWGLD 261 (332)
T ss_dssp SSCEEETTEEEEEEECSS--------SCCEEEEEETTSCCEEEEECS-EEEECCCEECCCGGGGGSSCC
T ss_pred CCeEEEeCceeeEEecCC--------ceEEEEEEecCCCceEEEECC-EEEEeeccCCCchHHhhcCcc
Confidence 589999999999998552 234566665 3455679999 699999977767777766654
No 254
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=95.05 E-value=0.073 Score=58.42 Aligned_cols=33 Identities=27% Similarity=0.297 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.++|||+|..|+-+|..|++. |.+|.++|+++
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 180 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKM-KKTVHVFESLE 180 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCeEEEEEccC
Confidence 4699999999999999999998 99999999875
No 255
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=95.01 E-value=0.2 Score=54.83 Aligned_cols=35 Identities=14% Similarity=0.184 Sum_probs=31.9
Q ss_pred cccEEEECCChhHHHHHHHHhhc-CCCeEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEI-KKWKVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~-~G~~VlVLEaG~ 151 (731)
.-.|+|||+|.+|+-+|..|++. +|.+|.++++.+
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~ 262 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRAS 262 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSS
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCC
Confidence 45799999999999999999996 688999999986
No 256
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=94.93 E-value=0.054 Score=60.29 Aligned_cols=33 Identities=18% Similarity=0.370 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~ 215 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTEL-GVPVTVVASQD 215 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCeEEEEEcCC
Confidence 3699999999999999999998 99999999874
No 257
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=94.85 E-value=0.068 Score=60.83 Aligned_cols=33 Identities=27% Similarity=0.326 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.++|||+|..|+-+|..|++. |.+|.++|+++
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 220 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRER-GIEVTLVEMAN 220 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCeEEEEecCC
Confidence 3699999999999999999998 99999999874
No 258
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=94.80 E-value=0.1 Score=57.34 Aligned_cols=33 Identities=24% Similarity=0.294 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.++|||+|..|+-+|..|++. |.+|.++|+++
T Consensus 171 ~~v~ViGgG~~g~e~A~~l~~~-g~~Vt~v~~~~ 203 (463)
T 4dna_A 171 ESILIAGGGYIAVEFANIFHGL-GVKTTLIYRGK 203 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCeEEEEEcCC
Confidence 4699999999999999999998 99999999874
No 259
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=94.67 E-value=0.092 Score=58.77 Aligned_cols=31 Identities=19% Similarity=0.235 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
.++|||+|..|+-+|..|++. |.+|.|+|+.
T Consensus 212 ~vvVIGgG~ig~E~A~~l~~~-G~~Vtlv~~~ 242 (519)
T 3qfa_A 212 KTLVVGASYVALECAGFLAGI-GLDVTVMVRS 242 (519)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred eEEEECCcHHHHHHHHHHHHc-CCeEEEEecc
Confidence 499999999999999999998 9999999975
No 260
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=94.49 E-value=0.074 Score=58.94 Aligned_cols=33 Identities=30% Similarity=0.430 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.++|||+|..|+-+|..|++. |.+|.++|+++
T Consensus 192 ~~v~ViGgG~~g~e~A~~l~~~-g~~Vtli~~~~ 224 (484)
T 3o0h_A 192 KSIVIVGGGYIGVEFANIFHGL-GVKTTLLHRGD 224 (484)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHc-CCeEEEEECCC
Confidence 4699999999999999999998 99999999874
No 261
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=94.41 E-value=0.1 Score=57.99 Aligned_cols=33 Identities=18% Similarity=0.150 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHhhc--CCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEI--KKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~--~G~~VlVLEaG~ 151 (731)
.++|||+|..|+-+|..|++. +|.+|.|+|+++
T Consensus 193 ~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~ 227 (495)
T 2wpf_A 193 RVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNN 227 (495)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCC
Confidence 699999999999999999885 289999999874
No 262
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=94.35 E-value=0.097 Score=58.10 Aligned_cols=34 Identities=18% Similarity=0.127 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHhhc--CCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEI--KKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~--~G~~VlVLEaG~ 151 (731)
-.++|||+|..|+-+|..|++. +|.+|.|+|+++
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~ 223 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGD 223 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCC
Confidence 3699999999999999999885 289999999874
No 263
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=93.65 E-value=0.15 Score=61.53 Aligned_cols=32 Identities=13% Similarity=0.142 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.++|||+|..|+-+|..|++. |.+|.|+|+.+
T Consensus 286 ~vvViGgG~~g~E~A~~L~~~-G~~Vtvv~~~~ 317 (965)
T 2gag_A 286 RIAVATTNDSAYELVRELAAT-GGVVAVIDARS 317 (965)
T ss_dssp SEEEEESSTTHHHHHHHHGGG-TCCSEEEESCS
T ss_pred eEEEEcCCHHHHHHHHHHHHc-CCcEEEEECCC
Confidence 599999999999999999999 99999999874
No 264
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.14 E-value=0.11 Score=46.95 Aligned_cols=32 Identities=19% Similarity=0.448 Sum_probs=30.0
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.++|||.|..|..+|..|.+. |++|+++|+.+
T Consensus 9 ~viIiG~G~~G~~la~~L~~~-g~~v~vid~~~ 40 (140)
T 3fwz_A 9 HALLVGYGRVGSLLGEKLLAS-DIPLVVIETSR 40 (140)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEEESCH
T ss_pred CEEEECcCHHHHHHHHHHHHC-CCCEEEEECCH
Confidence 499999999999999999998 99999999864
No 265
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=92.99 E-value=0.5 Score=57.39 Aligned_cols=32 Identities=22% Similarity=0.205 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHhhcCCC-eEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~-~VlVLEaG~ 151 (731)
.|+|||+|..|+-+|..|++. |. +|.|+++.+
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~-G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRC-GARRVFLVFRKG 366 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHT-TCSEEEEECSSC
T ss_pred cEEEECCChHHHHHHHHHHHc-CCCEEEEEEecC
Confidence 799999999999999999998 86 899999873
No 266
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=92.94 E-value=0.3 Score=54.34 Aligned_cols=33 Identities=24% Similarity=0.463 Sum_probs=27.1
Q ss_pred cEEEECCChhHHHHHHHHhhc-------------CCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEI-------------KKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~-------------~G~~VlVLEaG~ 151 (731)
.++|||+|++|+-+|..|++. ...+|.|+|+++
T Consensus 219 ~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~ 264 (502)
T 4g6h_A 219 SIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALP 264 (502)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSS
T ss_pred ceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEecccc
Confidence 499999999999999998863 135788888875
No 267
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=92.60 E-value=0.098 Score=47.10 Aligned_cols=32 Identities=31% Similarity=0.514 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-++|+|+|..|..+|..|+++ |++|+++|+.+
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~-g~~V~~id~~~ 39 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAA-GKKVLAVDKSK 39 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCeEEEEECCH
Confidence 499999999999999999999 99999999863
No 268
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=92.53 E-value=0.096 Score=57.32 Aligned_cols=35 Identities=20% Similarity=0.255 Sum_probs=32.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 116 ~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
...+++|||+|.+|+.+|..|++. |.+|+|+|+++
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~-g~~Vtlv~~~~ 182 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKA-GKKVTVIDILD 182 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC-CCeEEEEecCc
Confidence 357899999999999999999998 99999999985
No 269
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=92.42 E-value=0.31 Score=56.56 Aligned_cols=33 Identities=18% Similarity=0.271 Sum_probs=30.3
Q ss_pred ccEEEEC--CChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIG--AGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVG--sG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.|+||| +|..|+-+|..|++. |.+|.++++.+
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~-g~~Vtlv~~~~ 558 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQK-GYEVSIVTPGA 558 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred CEEEEEcCCCCccHHHHHHHHHhC-CCeeEEEeccc
Confidence 3599999 999999999999998 99999999874
No 270
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=92.35 E-value=0.12 Score=46.06 Aligned_cols=32 Identities=34% Similarity=0.508 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.++|||+|..|..+|..|++. |.+|+++|+.+
T Consensus 6 ~i~IiG~G~iG~~~a~~L~~~-g~~v~~~d~~~ 37 (140)
T 1lss_A 6 YIIIAGIGRVGYTLAKSLSEK-GHDIVLIDIDK 37 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 589999999999999999998 99999999853
No 271
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=92.20 E-value=0.12 Score=47.38 Aligned_cols=33 Identities=24% Similarity=0.375 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.|+|||+|..|..+|..|.+. |.+|+++++.+
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~-g~~V~vid~~~ 52 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSS-GHSVVVVDKNE 52 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCG
T ss_pred CcEEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 3599999999999999999998 99999999864
No 272
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=92.11 E-value=0.11 Score=55.82 Aligned_cols=33 Identities=21% Similarity=0.056 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.|+|||+|..|+-+|..|++. |.+|.|+|+.+
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~-g~~Vtvv~~~~ 179 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDS-GTPASIGIILE 179 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH-TCCEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCeEEEEEcCC
Confidence 3699999999999999999999 99999999986
No 273
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=92.10 E-value=0.12 Score=53.23 Aligned_cols=32 Identities=19% Similarity=0.269 Sum_probs=30.4
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 147 ~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~ 178 (312)
T 4gcm_A 147 RLFVIGGGDSAVEEGTFLTKF-ADKVTIVHRRD 178 (312)
T ss_dssp EEEEECCSHHHHHHHHHHTTT-CSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhc-CCEEEEEeccc
Confidence 599999999999999999998 99999999985
No 274
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=91.41 E-value=0.16 Score=46.51 Aligned_cols=31 Identities=16% Similarity=0.148 Sum_probs=29.3
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
-++|||+|..|..+|..|.+. |.+|+++|+.
T Consensus 5 ~vlI~G~G~vG~~la~~L~~~-g~~V~vid~~ 35 (153)
T 1id1_A 5 HFIVCGHSILAINTILQLNQR-GQNVTVISNL 35 (153)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEEECC
T ss_pred cEEEECCCHHHHHHHHHHHHC-CCCEEEEECC
Confidence 489999999999999999998 9999999985
No 275
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=90.93 E-value=0.19 Score=43.13 Aligned_cols=32 Identities=22% Similarity=0.477 Sum_probs=29.4
Q ss_pred cEEEECCChhHHHHHHHHhhcCC-CeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKK-WKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G-~~VlVLEaG~ 151 (731)
.++|+|+|..|..+|..|.+. | .+|+++++.+
T Consensus 7 ~v~I~G~G~iG~~~~~~l~~~-g~~~v~~~~r~~ 39 (118)
T 3ic5_A 7 NICVVGAGKIGQMIAALLKTS-SNYSVTVADHDL 39 (118)
T ss_dssp EEEEECCSHHHHHHHHHHHHC-SSEEEEEEESCH
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCceEEEEeCCH
Confidence 499999999999999999998 8 9999999863
No 276
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=90.92 E-value=0.17 Score=55.61 Aligned_cols=33 Identities=21% Similarity=0.327 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.++|||+|.+|+-+|..|++. |.+|.|+|+++
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 204 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKL-GAQVSVVEARE 204 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSS
T ss_pred CeEEEECcCHHHHHHHHHHHHC-CCeEEEEEcCC
Confidence 3699999999999999999999 99999999985
No 277
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=90.59 E-value=0.21 Score=51.31 Aligned_cols=33 Identities=24% Similarity=0.292 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.++|||+|..|+-+|..|++. |.+|.|+|+..
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~-G~~Vt~v~~~~ 185 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKY-GSKVIILHRRD 185 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTT-SSEEEEECSSS
T ss_pred CeEEEECCChHHHHHHHHHHHh-CCeeeeecccc
Confidence 4699999999999999999998 99999999874
No 278
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=90.47 E-value=0.19 Score=53.42 Aligned_cols=33 Identities=39% Similarity=0.534 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 176 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEA-GYHVKLIHRGA 176 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCC
Confidence 4699999999999999999998 99999999985
No 279
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=89.64 E-value=0.24 Score=44.26 Aligned_cols=32 Identities=25% Similarity=0.470 Sum_probs=29.4
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.++|+|+|..|..+|..|.+. |.+|+++++..
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~-g~~v~~~d~~~ 39 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRM-GHEVLAVDINE 39 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCCEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 399999999999999999998 99999999753
No 280
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=89.27 E-value=0.3 Score=53.42 Aligned_cols=33 Identities=24% Similarity=0.244 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 200 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGL-GAKTHLFEMFD 200 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhc-CCEEEEEEeCC
Confidence 3699999999999999999998 99999999985
No 281
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=88.68 E-value=0.3 Score=50.66 Aligned_cols=31 Identities=26% Similarity=0.411 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
-|.|||+|..|...|..+|.+ |++|+|+|..
T Consensus 8 ~VaViGaG~MG~giA~~~a~~-G~~V~l~D~~ 38 (319)
T 3ado_A 8 DVLIVGSGLVGRSWAMLFASG-GFRVKLYDIE 38 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEECSC
T ss_pred eEEEECCcHHHHHHHHHHHhC-CCeEEEEECC
Confidence 499999999999999999999 9999999975
No 282
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=88.37 E-value=0.38 Score=53.19 Aligned_cols=33 Identities=24% Similarity=0.315 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~-g~~Vtlv~~~~ 227 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRK-GKEVVLIDVVD 227 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred ceEEEECCCHHHHHHHHHHHHC-CCeEEEEEccc
Confidence 4699999999999999999998 99999999985
No 283
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=88.16 E-value=0.36 Score=50.79 Aligned_cols=32 Identities=19% Similarity=0.355 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.|+|||+|..|+-+|..|++. |.+|.++|+++
T Consensus 168 ~vvVvG~G~~g~e~a~~l~~~-g~~V~lv~~~~ 199 (369)
T 3d1c_A 168 QYVVIGGNESGFDAAYQLAKN-GSDIALYTSTT 199 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECC--
T ss_pred EEEEECCCcCHHHHHHHHHhc-CCeEEEEecCC
Confidence 699999999999999999998 99999999985
No 284
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=87.80 E-value=0.42 Score=49.69 Aligned_cols=32 Identities=19% Similarity=0.357 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.+.|||+|..|+..|..|+++ |.+|.++.|..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~-g~~V~~~~r~~ 35 (320)
T 3i83_A 4 NILVIGTGAIGSFYGALLAKT-GHCVSVVSRSD 35 (320)
T ss_dssp EEEEESCCHHHHHHHHHHHHT-TCEEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCeEEEEeCCh
Confidence 489999999999999999998 99999999864
No 285
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=87.69 E-value=0.35 Score=47.10 Aligned_cols=31 Identities=26% Similarity=0.427 Sum_probs=29.2
Q ss_pred EEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 120 FIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 120 vIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
++|||+|..|..+|..|.++ |++|+++|+.+
T Consensus 3 iiIiG~G~~G~~la~~L~~~-g~~v~vid~~~ 33 (218)
T 3l4b_C 3 VIIIGGETTAYYLARSMLSR-KYGVVIINKDR 33 (218)
T ss_dssp EEEECCHHHHHHHHHHHHHT-TCCEEEEESCH
T ss_pred EEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 89999999999999999998 99999999764
No 286
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=87.63 E-value=0.41 Score=53.78 Aligned_cols=35 Identities=14% Similarity=0.175 Sum_probs=32.2
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~ 153 (731)
-.|+|||+|.+|+-+|..|++. +.+|.|+++.+.+
T Consensus 186 krV~VIG~G~tgve~a~~la~~-~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAET-AKELYVFQRTPNW 220 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT-BSEEEEEESSCCC
T ss_pred CeEEEECCCccHHHHHHHHHhh-CCEEEEEEcCCCc
Confidence 3699999999999999999998 9999999999753
No 287
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=87.61 E-value=0.45 Score=53.43 Aligned_cols=35 Identities=17% Similarity=0.130 Sum_probs=32.3
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~ 153 (731)
-.|+|||+|.+|+-+|..|++. |.+|.|+++.+.+
T Consensus 179 krV~VIG~G~sgve~a~~l~~~-~~~Vtv~~r~~~~ 213 (540)
T 3gwf_A 179 RRVGVIGTGSTGQQVITSLAPE-VEHLTVFVRTPQY 213 (540)
T ss_dssp SEEEEECCSHHHHHHHHHHTTT-CSEEEEEESSCCC
T ss_pred ceEEEECCCchHHHHHHHHHhh-CCEEEEEECCCCc
Confidence 4699999999999999999998 9999999999753
No 288
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=87.33 E-value=1.8 Score=49.76 Aligned_cols=53 Identities=8% Similarity=0.080 Sum_probs=37.6
Q ss_pred hhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEeCCEEEEEEeccEEEecccCCCchHHH
Q psy7389 315 PIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKIL 381 (731)
Q Consensus 315 ~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~~g~~~~i~A~k~VVLAAGai~Tp~LL 381 (731)
..++ +.|+++++++.|++|.- + . +.+..+|...++.++ .||+|+|.-....|+
T Consensus 581 ~~l~-~~GV~v~~~~~v~~i~~----~-----~---v~~~~~G~~~~i~~D-~Vi~a~G~~p~~~l~ 633 (671)
T 1ps9_A 581 TTLL-SRGVKMIPGVSYQKIDD----D-----G---LHVVINGETQVLAVD-NVVICAGQEPNRALA 633 (671)
T ss_dssp HHHH-HTTCEEECSCEEEEEET----T-----E---EEEEETTEEEEECCS-EEEECCCEEECCTTH
T ss_pred HHHH-hcCCEEEeCcEEEEEeC----C-----e---EEEecCCeEEEEeCC-EEEECCCccccHHHH
Confidence 3444 57999999999999872 2 2 333246666689999 699999976555554
No 289
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=87.24 E-value=0.43 Score=49.38 Aligned_cols=32 Identities=25% Similarity=0.228 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.+.|||+|..|+..|..|+++ |.+|.++.|..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~-g~~V~~~~r~~ 35 (312)
T 3hn2_A 4 RIAIVGAGALGLYYGALLQRS-GEDVHFLLRRD 35 (312)
T ss_dssp CEEEECCSTTHHHHHHHHHHT-SCCEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHHC-CCeEEEEEcCc
Confidence 489999999999999999998 99999999864
No 290
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=87.22 E-value=0.49 Score=51.50 Aligned_cols=33 Identities=18% Similarity=0.260 Sum_probs=31.1
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~ 152 (731)
.++|||+|..|+-+|..|++. |.+|.|+|+++.
T Consensus 149 ~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~ 181 (437)
T 4eqs_A 149 KVLVVGAGYVSLEVLENLYER-GLHPTLIHRSDK 181 (437)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCEEEEEESSSC
T ss_pred EEEEECCccchhhhHHHHHhc-CCcceeeeeecc
Confidence 699999999999999999999 999999999863
No 291
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=87.04 E-value=0.51 Score=51.47 Aligned_cols=32 Identities=25% Similarity=0.418 Sum_probs=30.7
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.++|||+|..|+-+|..|++. |.+|.++|+++
T Consensus 150 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 181 (449)
T 3kd9_A 150 NVVIIGGGYIGIEMAEAFAAQ-GKNVTMIVRGE 181 (449)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCeEEEEEcCC
Confidence 799999999999999999998 99999999986
No 292
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=87.04 E-value=0.46 Score=53.42 Aligned_cols=35 Identities=17% Similarity=0.220 Sum_probs=32.2
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~ 153 (731)
-.|+|||+|.+|+-+|..|++. |.+|.|++|.+.+
T Consensus 192 krV~VIG~G~sgve~a~~l~~~-~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 192 KRVGVIGTGSSGIQSIPIIAEQ-AEQLFVFQRSANY 226 (549)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-BSEEEEEESSCCC
T ss_pred CEEEEECCCchHHHHHHHHHhh-CCEEEEEECCCCc
Confidence 4699999999999999999999 9999999999753
No 293
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=86.67 E-value=0.51 Score=48.51 Aligned_cols=31 Identities=23% Similarity=0.350 Sum_probs=29.3
Q ss_pred EEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 120 FIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 120 vIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
|.|||+|..|...|..|+++ |++|+++++.+
T Consensus 18 I~VIG~G~mG~~iA~~la~~-G~~V~~~d~~~ 48 (302)
T 1f0y_A 18 VTVIGGGLMGAGIAQVAAAT-GHTVVLVDQTE 48 (302)
T ss_dssp EEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 99999999999999999999 99999999863
No 294
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=86.39 E-value=0.5 Score=51.51 Aligned_cols=33 Identities=15% Similarity=0.201 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCe-EEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWK-VLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~-VlVLEaG~ 151 (731)
-.|+|||+|.+|+-+|..|++. |.+ |.|+++++
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~-~~~~V~l~~r~~ 246 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPV-AKHPIYQSLLGG 246 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTT-SCSSEEEECTTC
T ss_pred CEEEEEccCcCHHHHHHHHHHH-hCCcEEEEeCCC
Confidence 4699999999999999999998 998 99999985
No 295
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=86.34 E-value=0.55 Score=47.80 Aligned_cols=32 Identities=16% Similarity=0.277 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-|.|||+|..|...|..|+++ |++|++.++.+
T Consensus 6 kV~VIGaG~mG~~iA~~la~~-G~~V~l~d~~~ 37 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFH-GFAVTAYDINT 37 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 389999999999999999999 99999999863
No 296
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=85.66 E-value=0.66 Score=50.86 Aligned_cols=33 Identities=21% Similarity=0.275 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 209 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARL-GSKVTVLARNT 209 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCEEEEEEECC
Confidence 3699999999999999999998 99999999985
No 297
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=85.41 E-value=0.7 Score=46.82 Aligned_cols=31 Identities=16% Similarity=0.153 Sum_probs=29.2
Q ss_pred EEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 120 FIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 120 vIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
+.|||+|..|...|..|+++ |++|.++++.+
T Consensus 3 i~iiG~G~~G~~~a~~l~~~-g~~V~~~~r~~ 33 (291)
T 1ks9_A 3 ITVLGCGALGQLWLTALCKQ-GHEVQGWLRVP 33 (291)
T ss_dssp EEEECCSHHHHHHHHHHHHT-TCEEEEECSSC
T ss_pred EEEECcCHHHHHHHHHHHhC-CCCEEEEEcCc
Confidence 78999999999999999998 99999999864
No 298
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=85.25 E-value=0.59 Score=48.86 Aligned_cols=31 Identities=32% Similarity=0.469 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
-+.|||+|..|+..|..|+++ |.+|.++++.
T Consensus 5 kI~IiGaG~~G~~~a~~L~~~-g~~V~~~~r~ 35 (335)
T 3ghy_A 5 RICIVGAGAVGGYLGARLALA-GEAINVLARG 35 (335)
T ss_dssp CEEEESCCHHHHHHHHHHHHT-TCCEEEECCH
T ss_pred EEEEECcCHHHHHHHHHHHHC-CCEEEEEECh
Confidence 489999999999999999999 9999999985
No 299
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=85.23 E-value=0.5 Score=48.43 Aligned_cols=32 Identities=25% Similarity=0.338 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.+.|||+|..|+..|..|+++ |.+|.++.|..
T Consensus 4 kI~iiGaGa~G~~~a~~L~~~-g~~V~~~~r~~ 35 (294)
T 3g17_A 4 SVAIIGPGAVGTTIAYELQQS-LPHTTLIGRHA 35 (294)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-CTTCEEEESSC
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCeEEEEEecc
Confidence 489999999999999999999 99999999873
No 300
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=85.17 E-value=0.61 Score=51.17 Aligned_cols=33 Identities=9% Similarity=0.052 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.|+|||+|.+|+-+|..|++. |.+|.|+++.+
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~-g~~V~li~~~~ 230 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKY-GAKKLISCYRT 230 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHT-TCSEEEEECSS
T ss_pred CEEEEEcCCCCHHHHHHHHHHh-CCeEEEEEECC
Confidence 3599999999999999999998 99999999874
No 301
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=85.10 E-value=0.79 Score=44.33 Aligned_cols=33 Identities=15% Similarity=0.277 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.+.|||+|..|...|..|+++ |.+|.++++.+
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~-g~~V~~~~~~~ 52 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIA-GHEVTYYGSKD 52 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCH
Confidence 3599999999999999999998 99999998864
No 302
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=84.68 E-value=0.82 Score=49.21 Aligned_cols=33 Identities=33% Similarity=0.343 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.++|||+|..|+-+|..|++. |.+|.++|+.+
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtvv~~~~ 185 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKF-GVNVTLLEALP 185 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhc-CCeEEEEecCC
Confidence 4699999999999999999998 99999999986
No 303
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=84.62 E-value=0.69 Score=50.96 Aligned_cols=34 Identities=32% Similarity=0.548 Sum_probs=30.8
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
..-+.|||.|..|+..|..||++ |++|+++++.+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~-G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADI-GHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 35699999999999999999999 99999999753
No 304
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=84.61 E-value=0.73 Score=46.00 Aligned_cols=34 Identities=24% Similarity=0.443 Sum_probs=30.5
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCC-eEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~-~VlVLEaG~ 151 (731)
...|+|||+|..|+.+|..|++. |. +|.|+++..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~-Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASA-GVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHc-CCCeEEEEcCCC
Confidence 35699999999999999999999 97 899999864
No 305
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=84.48 E-value=0.8 Score=49.09 Aligned_cols=33 Identities=24% Similarity=0.261 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.++|||+|..|+-+|..|++. |.+|.++|+.+
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtvv~~~~ 175 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAK-GLEVDVVELAP 175 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCC
Confidence 4699999999999999999998 99999999986
No 306
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=84.28 E-value=0.83 Score=44.74 Aligned_cols=32 Identities=6% Similarity=0.148 Sum_probs=29.2
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
--|+|||+|-.|...|..|.++ |.+|+|+...
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~-GA~VtVvap~ 63 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQE-GAAITVVAPT 63 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGG-CCCEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEECCC
Confidence 3499999999999999999999 9999999853
No 307
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=83.84 E-value=0.88 Score=49.85 Aligned_cols=33 Identities=27% Similarity=0.328 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.++|||+|..|+-+|..|++. |.+|.++|+++
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 205 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLM-GVQTHIIEMLD 205 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCEEEEEEeCC
Confidence 3599999999999999999998 99999999985
No 308
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=83.75 E-value=0.84 Score=46.81 Aligned_cols=31 Identities=29% Similarity=0.311 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
-+.|||+|..|...|..|+++ |++|.++++.
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~r~ 35 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQG-GNDVTLIDQW 35 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSC
T ss_pred eEEEECcCHHHHHHHHHHHhC-CCcEEEEECC
Confidence 389999999999999999998 9999999985
No 309
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=83.71 E-value=0.77 Score=52.10 Aligned_cols=31 Identities=19% Similarity=0.207 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
.++|||+|..|+-+|..|++. |.+|.|+|++
T Consensus 288 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~ 318 (598)
T 2x8g_A 288 KTLVIGASYVALECAGFLASL-GGDVTVMVRS 318 (598)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHc-CCEEEEEECC
Confidence 599999999999999999998 9999999986
No 310
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=83.61 E-value=0.89 Score=46.88 Aligned_cols=31 Identities=32% Similarity=0.370 Sum_probs=28.8
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.+.|||+|..|+..|..|+ + |.+|.++.|.+
T Consensus 4 kI~IiGaGa~G~~~a~~L~-~-g~~V~~~~r~~ 34 (307)
T 3ego_A 4 KIGIIGGGSVGLLCAYYLS-L-YHDVTVVTRRQ 34 (307)
T ss_dssp EEEEECCSHHHHHHHHHHH-T-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHh-c-CCceEEEECCH
Confidence 4899999999999999999 8 99999999874
No 311
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=83.47 E-value=0.71 Score=46.73 Aligned_cols=31 Identities=23% Similarity=0.397 Sum_probs=29.1
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
-|+|||+|-.|...|..|.+. |.+|+|++..
T Consensus 15 ~VLVVGgG~va~rka~~Ll~~-Ga~VtViap~ 45 (274)
T 1kyq_A 15 RILLIGGGEVGLTRLYKLMPT-GCKLTLVSPD 45 (274)
T ss_dssp EEEEEEESHHHHHHHHHHGGG-TCEEEEEEEE
T ss_pred EEEEECCcHHHHHHHHHHHhC-CCEEEEEcCC
Confidence 499999999999999999999 9999999964
No 312
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=83.33 E-value=0.93 Score=46.53 Aligned_cols=34 Identities=26% Similarity=0.343 Sum_probs=31.2
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~ 152 (731)
-.++|||+|..|+-+|..|++. |.+|.++++.+.
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~-g~~V~~i~~~~~ 189 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEY-VKNVTIIEYMPK 189 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTT-BSEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhh-CCcEEEEEcCCc
Confidence 4699999999999999999998 999999999863
No 313
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=83.32 E-value=0.89 Score=46.99 Aligned_cols=32 Identities=25% Similarity=0.406 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHhhcCCC--eEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKW--KVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~--~VlVLEaG~ 151 (731)
-++|||+|..|..+|..|+++ |+ +|.++++..
T Consensus 9 kI~IiGaG~vG~~~a~~l~~~-g~~~~V~l~d~~~ 42 (319)
T 1lld_A 9 KLAVIGAGAVGSTLAFAAAQR-GIAREIVLEDIAK 42 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCCh
Confidence 499999999999999999998 98 999999863
No 314
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=83.22 E-value=0.85 Score=47.34 Aligned_cols=32 Identities=25% Similarity=0.371 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-|.|||+|..|...|..|+++ |++|.+.++.+
T Consensus 8 kI~vIGaG~MG~~iA~~la~~-G~~V~l~d~~~ 39 (319)
T 2dpo_A 8 DVLIVGSGLVGRSWAMLFASG-GFRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred eEEEEeeCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 389999999999999999999 99999999863
No 315
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=83.19 E-value=0.94 Score=49.75 Aligned_cols=58 Identities=14% Similarity=0.089 Sum_probs=40.2
Q ss_pred ChhhhccHhhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEeCCEEEEEEeccEEEecccCC
Q psy7389 307 STNGAFIRPIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAI 375 (731)
Q Consensus 307 s~~~~~L~~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~~g~~~~i~A~k~VVLAAGai 375 (731)
..+...|.++++ ..|++|++++.|++|+.++ ++ +++||++.++ + +++|+ .||++++-+
T Consensus 256 ~~L~~aL~r~~~-~~Gg~i~l~t~V~~I~~d~-~g-----~v~gV~~~~G-~--~i~Ad-~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCA-INGGTFMLNKNVVDFVFDD-DN-----KVCGIKSSDG-E--IAYCD-KVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHH-HC--CEESSCCEEEEEECT-TS-----CEEEEEETTS-C--EEEEE-EEEECGGGC
T ss_pred HHHHHHHHHHHH-HcCCEEEeCCeEEEEEEec-CC-----eEEEEEECCC-c--EEECC-EEEECCCcc
Confidence 344444555555 6899999999999999843 24 6888876443 2 58998 599999865
No 316
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=82.92 E-value=0.93 Score=46.98 Aligned_cols=30 Identities=33% Similarity=0.642 Sum_probs=27.9
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
.+.|||+|..|+..|..|+++ |.+|.++ +-
T Consensus 21 kI~IiGaGa~G~~~a~~L~~~-G~~V~l~-~~ 50 (318)
T 3hwr_A 21 KVAIMGAGAVGCYYGGMLARA-GHEVILI-AR 50 (318)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-TCEEEEE-CC
T ss_pred cEEEECcCHHHHHHHHHHHHC-CCeEEEE-Ec
Confidence 489999999999999999999 9999999 54
No 317
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=82.63 E-value=0.84 Score=42.87 Aligned_cols=33 Identities=21% Similarity=0.176 Sum_probs=28.8
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.++|||.|..|..+|..|.+..|.+|+++|+.+
T Consensus 41 ~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 41 QVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 499999999999999999873279999999864
No 318
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=82.00 E-value=1 Score=49.15 Aligned_cols=32 Identities=25% Similarity=0.396 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.+.|||.|..|+..|..|+++ |++|+++++.+
T Consensus 4 kI~VIG~G~vG~~lA~~La~~-G~~V~~~D~~~ 35 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAEL-GANVRCIDTDR 35 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHhc-CCEEEEEECCH
Confidence 489999999999999999999 99999999864
No 319
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=81.89 E-value=1.1 Score=48.99 Aligned_cols=32 Identities=22% Similarity=0.278 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-|.|||+|..|...|..|+++ |++|+++|+.+
T Consensus 56 kVaVIGaG~MG~~IA~~la~a-G~~V~l~D~~~ 87 (460)
T 3k6j_A 56 SVAIIGGGTMGKAMAICFGLA-GIETFLVVRNE 87 (460)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCeEEEEECcH
Confidence 499999999999999999999 99999999864
No 320
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=81.80 E-value=1 Score=48.89 Aligned_cols=33 Identities=18% Similarity=0.275 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
..+.|||.|..|+.+|..||++ |++|+.+|-.+
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~-G~~V~g~Did~ 54 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALL-GHRVVGYDVNP 54 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCEEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHHhC-CCcEEEEECCH
Confidence 5699999999999999999999 99999999653
No 321
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=81.73 E-value=1 Score=48.94 Aligned_cols=31 Identities=29% Similarity=0.347 Sum_probs=28.9
Q ss_pred EEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 120 FIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 120 vIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
+.|||.|..|+..|..|+++ |++|+++++.+
T Consensus 3 I~VIG~G~vG~~~A~~la~~-G~~V~~~d~~~ 33 (436)
T 1mv8_A 3 ISIFGLGYVGAVCAGCLSAR-GHEVIGVDVSS 33 (436)
T ss_dssp EEEECCSTTHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEECCCHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 78999999999999999999 99999999753
No 322
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=81.53 E-value=1.1 Score=46.64 Aligned_cols=29 Identities=28% Similarity=0.374 Sum_probs=28.0
Q ss_pred EEEECCChhHHHHHHHHhhcCCCeEEEEec
Q psy7389 120 FIIIGAGSAGCVLANRLSEIKKWKVLLLEA 149 (731)
Q Consensus 120 vIIVGsG~aG~~aA~~LA~~~G~~VlVLEa 149 (731)
+.|||+|..|...|..|+++ |++|.++++
T Consensus 3 I~iiG~G~mG~~~a~~L~~~-g~~V~~~~r 31 (335)
T 1txg_A 3 VSILGAGAMGSALSVPLVDN-GNEVRIWGT 31 (335)
T ss_dssp EEEESCCHHHHHHHHHHHHH-CCEEEEECC
T ss_pred EEEECcCHHHHHHHHHHHhC-CCeEEEEEc
Confidence 78999999999999999999 999999998
No 323
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=81.46 E-value=1.1 Score=49.15 Aligned_cols=32 Identities=19% Similarity=0.313 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-|.|||+|..|...|..|+++ |++|+++|+.+
T Consensus 39 kV~VIGaG~MG~~iA~~la~~-G~~V~l~D~~~ 70 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFARV-GISVVAVESDP 70 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-TCEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 499999999999999999999 99999999763
No 324
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=81.36 E-value=0.83 Score=50.07 Aligned_cols=31 Identities=29% Similarity=0.446 Sum_probs=29.5
Q ss_pred EEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 120 FIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 120 vIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
+||+|+|-.|..+|..|++. |++|+|+|+.+
T Consensus 6 iiI~G~G~vG~~la~~L~~~-~~~v~vId~d~ 36 (461)
T 4g65_A 6 IIILGAGQVGGTLAENLVGE-NNDITIVDKDG 36 (461)
T ss_dssp EEEECCSHHHHHHHHHTCST-TEEEEEEESCH
T ss_pred EEEECCCHHHHHHHHHHHHC-CCCEEEEECCH
Confidence 89999999999999999998 99999999864
No 325
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=81.33 E-value=1.2 Score=49.49 Aligned_cols=33 Identities=6% Similarity=0.138 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~-G~~Vtlv~~~~ 247 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNAT-GRRTVMLVRTE 247 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSC
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCeEEEEEecC
Confidence 4699999999999999999998 99999999986
No 326
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=81.32 E-value=0.84 Score=49.10 Aligned_cols=57 Identities=18% Similarity=0.144 Sum_probs=41.8
Q ss_pred hhccHhhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEeCCEEEEEEeccEEEecccCCCchHHH
Q psy7389 310 GAFIRPIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKIL 381 (731)
Q Consensus 310 ~~~L~~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~~g~~~~i~A~k~VVLAAGai~Tp~LL 381 (731)
...|.+.+. +.|++|++++.|++|..++ + ++ | ..++. ++.|+ .||+|+|+..+.+||
T Consensus 192 ~~~l~~~~~-~~G~~i~~~~~V~~i~~~~--~-----~v--V--~~~g~--~~~ad-~Vv~a~~~~~~~~ll 248 (421)
T 3nrn_A 192 IDELERIIM-ENKGKILTRKEVVEINIEE--K-----KV--Y--TRDNE--EYSFD-VAISNVGVRETVKLI 248 (421)
T ss_dssp HHHHHHHHH-TTTCEEESSCCEEEEETTT--T-----EE--E--ETTCC--EEECS-EEEECSCHHHHHHHH
T ss_pred HHHHHHHHH-HCCCEEEcCCeEEEEEEEC--C-----EE--E--EeCCc--EEEeC-EEEECCCHHHHHHhc
Confidence 334555555 6799999999999999763 3 44 3 33443 68998 599999988777765
No 327
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=81.29 E-value=1.2 Score=45.52 Aligned_cols=33 Identities=27% Similarity=0.400 Sum_probs=29.7
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
+--|.|||.|..|...|..|+ + |++|++.++.+
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-a-G~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-S-KHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T-TSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-c-CCEEEEEECCH
Confidence 345899999999999999999 8 99999999864
No 328
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=81.02 E-value=1.4 Score=45.49 Aligned_cols=33 Identities=21% Similarity=0.337 Sum_probs=30.0
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCC-eEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~-~VlVLEaG~ 151 (731)
--|.|||+|..|...|..|+++ |+ +|+++++..
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~-g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD-NLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCceEEEEeCCc
Confidence 3499999999999999999999 98 999999864
No 329
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=80.96 E-value=1.4 Score=42.42 Aligned_cols=30 Identities=23% Similarity=0.390 Sum_probs=28.3
Q ss_pred EEEEC-CChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 120 FIIIG-AGSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 120 vIIVG-sG~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
+.||| +|..|...|..|+++ |++|.++++.
T Consensus 3 i~iiGa~G~~G~~ia~~l~~~-g~~V~~~~r~ 33 (212)
T 1jay_A 3 VALLGGTGNLGKGLALRLATL-GHEIVVGSRR 33 (212)
T ss_dssp EEEETTTSHHHHHHHHHHHTT-TCEEEEEESS
T ss_pred EEEEcCCCHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 78999 999999999999998 9999999985
No 330
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=80.76 E-value=1.3 Score=46.28 Aligned_cols=32 Identities=38% Similarity=0.528 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
.-+.|||+|..|+..|..|+++ |++|.++.|.
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~-G~~V~~~~r~ 46 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHEN-GEEVILWARR 46 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSS
T ss_pred CcEEEECcCHHHHHHHHHHHhC-CCeEEEEeCC
Confidence 4599999999999999999999 9999999885
No 331
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=80.56 E-value=1.2 Score=49.96 Aligned_cols=31 Identities=13% Similarity=0.225 Sum_probs=29.3
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
.++|||+|+.|+-.|..+++- |.+|+|+++.
T Consensus 225 ~lvIIGgG~IGlE~A~~~~~l-G~~VTii~~~ 255 (542)
T 4b1b_A 225 KTLVVGASYVALECSGFLNSL-GYDVTVAVRS 255 (542)
T ss_dssp SEEEECCSHHHHHHHHHHHHH-TCCEEEEESS
T ss_pred eEEEECCCHHHHHHHHHHHhc-CCeEEEeccc
Confidence 499999999999999999999 9999999975
No 332
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=80.50 E-value=0.8 Score=41.22 Aligned_cols=32 Identities=22% Similarity=0.367 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-++|||+|..|..+|..|++. |.+|.|.++..
T Consensus 23 ~v~iiG~G~iG~~~a~~l~~~-g~~v~v~~r~~ 54 (144)
T 3oj0_A 23 KILLVGNGMLASEIAPYFSYP-QYKVTVAGRNI 54 (144)
T ss_dssp EEEEECCSHHHHHHGGGCCTT-TCEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCEEEEEcCCH
Confidence 499999999999999999997 99999999863
No 333
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=80.27 E-value=1.2 Score=47.89 Aligned_cols=32 Identities=25% Similarity=0.297 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.|||||.|-.|..+|..|.+. |.+|+|||+.+
T Consensus 6 ~viIiG~Gr~G~~va~~L~~~-g~~vvvId~d~ 37 (413)
T 3l9w_A 6 RVIIAGFGRFGQITGRLLLSS-GVKMVVLDHDP 37 (413)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEECCH
T ss_pred eEEEECCCHHHHHHHHHHHHC-CCCEEEEECCH
Confidence 499999999999999999998 99999999875
No 334
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=79.92 E-value=1.4 Score=48.26 Aligned_cols=34 Identities=21% Similarity=0.280 Sum_probs=31.0
Q ss_pred cEEEECCChhHHHHHHHHhhcCCC-eEEEEecCCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGIE 152 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~-~VlVLEaG~~ 152 (731)
.+.|||.|..|+.+|..||+++|+ +|+++++.+.
T Consensus 20 kIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 20 KIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp EEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred EEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 499999999999999999997689 9999998753
No 335
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=79.83 E-value=1.4 Score=46.16 Aligned_cols=32 Identities=22% Similarity=0.361 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.+.|||+|..|...|..|+++ |++|.++++.+
T Consensus 6 ki~iiG~G~~G~~~a~~L~~~-g~~V~~~~r~~ 37 (359)
T 1bg6_A 6 TYAVLGLGNGGHAFAAYLALK-GQSVLAWDIDA 37 (359)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 599999999999999999998 99999998753
No 336
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=79.45 E-value=1.4 Score=46.56 Aligned_cols=33 Identities=36% Similarity=0.312 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.+.|||+|.-|...|..|+++ |++|.+.++.+
T Consensus 30 mkI~VIGaG~mG~alA~~La~~-G~~V~l~~r~~ 62 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARK-GQKVRLWSYES 62 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTT-TCCEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 3599999999999999999999 99999999864
No 337
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=79.38 E-value=1.5 Score=44.19 Aligned_cols=32 Identities=19% Similarity=0.142 Sum_probs=29.6
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.++|||+|..|+-+|..|++. | +|.+++++.
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~-g-~v~~v~~~~ 173 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDW-G-ETTFFTNGI 173 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGT-S-EEEEECTTT
T ss_pred CEEEEEecCccHHHHHHHhhhc-C-cEEEEECCC
Confidence 4699999999999999999998 8 999999874
No 338
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=79.37 E-value=1.5 Score=45.06 Aligned_cols=31 Identities=19% Similarity=0.223 Sum_probs=28.7
Q ss_pred EEEECCChhHHHHHHHHhhcCCC--eEEEEecCC
Q psy7389 120 FIIIGAGSAGCVLANRLSEIKKW--KVLLLEAGI 151 (731)
Q Consensus 120 vIIVGsG~aG~~aA~~LA~~~G~--~VlVLEaG~ 151 (731)
|+|||+|..|...|..|+.+ |+ .|.++|...
T Consensus 3 I~VIGaG~vG~~la~~la~~-g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 3 VGVVGTGFVGSTAAFALVLR-GSCSELVLVDRDE 35 (304)
T ss_dssp EEEECCSHHHHHHHHHHHHT-TCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCCH
Confidence 78999999999999999998 98 999999753
No 339
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=79.28 E-value=1.4 Score=45.88 Aligned_cols=32 Identities=19% Similarity=0.259 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHhhcCCC-eEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~-~VlVLEaG~ 151 (731)
-|.|||+|..|..+|..|+.. |+ +|+++|.-.
T Consensus 11 kI~VIGaG~vG~~lA~~la~~-g~~~V~L~D~~~ 43 (331)
T 1pzg_A 11 KVAMIGSGMIGGTMGYLCALR-ELADVVLYDVVK 43 (331)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCh
Confidence 599999999999999999998 98 999999864
No 340
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=79.27 E-value=1.6 Score=42.37 Aligned_cols=32 Identities=28% Similarity=0.318 Sum_probs=29.4
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-+.|||+|..|...|..|++. |++|.++++..
T Consensus 30 ~I~iiG~G~~G~~la~~l~~~-g~~V~~~~r~~ 61 (215)
T 2vns_A 30 KVGILGSGDFARSLATRLVGS-GFKVVVGSRNP 61 (215)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEEESSH
T ss_pred EEEEEccCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 499999999999999999998 99999999863
No 341
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=79.11 E-value=1.7 Score=43.09 Aligned_cols=33 Identities=18% Similarity=0.407 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
--+.|||.|..|...|..|+++ |++|++.++.+
T Consensus 20 ~kIgiIG~G~mG~alA~~L~~~-G~~V~~~~r~~ 52 (245)
T 3dtt_A 20 MKIAVLGTGTVGRTMAGALADL-GHEVTIGTRDP 52 (245)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCh
Confidence 4589999999999999999999 99999999864
No 342
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=79.10 E-value=1.6 Score=44.03 Aligned_cols=32 Identities=22% Similarity=0.316 Sum_probs=29.3
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-++|+|+|..|..+|..|++. |.+|.|+.|..
T Consensus 121 ~vlViGaGg~g~a~a~~L~~~-G~~V~v~~R~~ 152 (271)
T 1nyt_A 121 RILLIGAGGASRGVLLPLLSL-DCAVTITNRTV 152 (271)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSH
T ss_pred EEEEECCcHHHHHHHHHHHHc-CCEEEEEECCH
Confidence 499999999999999999999 99999998763
No 343
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=78.81 E-value=1.7 Score=47.23 Aligned_cols=35 Identities=20% Similarity=0.374 Sum_probs=32.1
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIE 152 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~ 152 (731)
...+.|||.|..|+..|..||++ |++|+++++.+.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~-G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF-GHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCHH
Confidence 56789999999999999999999 999999998753
No 344
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=78.59 E-value=1.9 Score=44.41 Aligned_cols=32 Identities=19% Similarity=0.301 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.+.|||.|..|...|..|+++ |++|.+.++.+
T Consensus 23 ~I~iIG~G~mG~~~A~~l~~~-G~~V~~~dr~~ 54 (310)
T 3doj_A 23 EVGFLGLGIMGKAMSMNLLKN-GFKVTVWNRTL 54 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSG
T ss_pred EEEEECccHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 499999999999999999999 99999999864
No 345
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=78.28 E-value=1.7 Score=45.24 Aligned_cols=32 Identities=28% Similarity=0.382 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHhhcCCC-eEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~-~VlVLEaG~ 151 (731)
-|.|||+|..|..+|..||.. |+ +|+++|...
T Consensus 16 kI~ViGaG~vG~~iA~~la~~-g~~~V~L~Di~~ 48 (328)
T 2hjr_A 16 KISIIGAGQIGSTIALLLGQK-DLGDVYMFDIIE 48 (328)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCH
Confidence 599999999999999999998 98 999999864
No 346
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=78.28 E-value=1.2 Score=46.97 Aligned_cols=32 Identities=25% Similarity=0.308 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.|.|||+|..|...|..|+++ |++|.++++.+
T Consensus 17 kI~iIG~G~mG~~la~~L~~~-G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKK-CREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTT-EEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 599999999999999999998 99999998863
No 347
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=78.26 E-value=1.7 Score=47.55 Aligned_cols=53 Identities=11% Similarity=0.086 Sum_probs=36.9
Q ss_pred CCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEe--------------CCEEEEEEeccEEEecccCCCch
Q psy7389 320 RKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFY--------------KKKLRRARAKKEVISSAGAINSP 378 (731)
Q Consensus 320 ~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~--------------~g~~~~i~A~k~VVLAAGai~Tp 378 (731)
..|++|++++.+.+|.-+++++ ++.+|++.+ +|...++.++ .||+|+|.-.++
T Consensus 269 ~~gv~~~~~~~~~~i~~~~~~~-----~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d-~Vi~a~G~~p~~ 335 (460)
T 1cjc_A 269 SRAWGLRFFRSPQQVLPSPDGR-----RAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCG-LVLSSIGYKSRP 335 (460)
T ss_dssp SEEEEEECSEEEEEEEECTTSS-----SEEEEEEEEEEEESSGGGCEEEEEEEEEEEECS-EEEECCCEECCC
T ss_pred CceEEEECCCChheEEcCCCCc-----eEEEEEEEEEEEccccCCCcccCCCceEEEEcC-EEEECCCCCCCC
Confidence 3689999999999998552221 255666542 2444679998 799999965555
No 348
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=78.19 E-value=1.8 Score=43.65 Aligned_cols=31 Identities=32% Similarity=0.416 Sum_probs=29.4
Q ss_pred EEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 120 FIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 120 vIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
|+|.|+|+.|..++.+|.++ |++|+++.|..
T Consensus 6 ilVtGaG~iG~~l~~~L~~~-g~~V~~~~r~~ 36 (286)
T 3gpi_A 6 ILIAGCGDLGLELARRLTAQ-GHEVTGLRRSA 36 (286)
T ss_dssp EEEECCSHHHHHHHHHHHHT-TCCEEEEECTT
T ss_pred EEEECCCHHHHHHHHHHHHC-CCEEEEEeCCc
Confidence 89999999999999999999 99999999874
No 349
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=78.15 E-value=1.9 Score=43.40 Aligned_cols=31 Identities=19% Similarity=0.407 Sum_probs=29.4
Q ss_pred EEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 120 FIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 120 vIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
|+|+|+|+.|..++.+|.++ |++|.++.|..
T Consensus 8 ilVtGaG~iG~~l~~~L~~~-g~~V~~~~r~~ 38 (286)
T 3ius_A 8 LLSFGHGYTARVLSRALAPQ-GWRIIGTSRNP 38 (286)
T ss_dssp EEEETCCHHHHHHHHHHGGG-TCEEEEEESCG
T ss_pred EEEECCcHHHHHHHHHHHHC-CCEEEEEEcCh
Confidence 99999999999999999999 99999999864
No 350
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=78.08 E-value=2.1 Score=41.03 Aligned_cols=31 Identities=26% Similarity=0.296 Sum_probs=28.6
Q ss_pred EEEECC-ChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 120 FIIIGA-GSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 120 vIIVGs-G~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
|+|+|+ |..|..++.+|+++ |++|.++.|.+
T Consensus 3 vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~ 34 (221)
T 3ew7_A 3 IGIIGATGRAGSRILEEAKNR-GHEVTAIVRNA 34 (221)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TCEEEEEESCS
T ss_pred EEEEcCCchhHHHHHHHHHhC-CCEEEEEEcCc
Confidence 799995 99999999999999 99999999864
No 351
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=77.94 E-value=1.9 Score=44.98 Aligned_cols=34 Identities=24% Similarity=0.557 Sum_probs=30.2
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCC-eEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~-~VlVLEaG~ 151 (731)
..-|+|||+|..|+.+|..|+.. |. ++.|++...
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~a-GVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAW-GVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHc-CCCEEEEecCCE
Confidence 45699999999999999999999 86 788999874
No 352
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=77.30 E-value=1.7 Score=47.93 Aligned_cols=32 Identities=25% Similarity=0.416 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-|.|||+|..|...|..|+++ |++|++.|+..
T Consensus 7 kVgVIGaG~MG~~IA~~la~a-G~~V~l~D~~~ 38 (483)
T 3mog_A 7 TVAVIGSGTMGAGIAEVAASH-GHQVLLYDISA 38 (483)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHHC-CCeEEEEECCH
Confidence 389999999999999999999 99999999764
No 353
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=77.27 E-value=2 Score=43.63 Aligned_cols=31 Identities=26% Similarity=0.365 Sum_probs=29.1
Q ss_pred EEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 120 FIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 120 vIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
+.|||.|..|...|..|+++ |++|++.++.+
T Consensus 4 i~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~ 34 (287)
T 3pef_A 4 FGFIGLGIMGSAMAKNLVKA-GCSVTIWNRSP 34 (287)
T ss_dssp EEEECCSHHHHHHHHHHHHT-TCEEEEECSSG
T ss_pred EEEEeecHHHHHHHHHHHHC-CCeEEEEcCCH
Confidence 88999999999999999999 99999999864
No 354
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=77.17 E-value=1.9 Score=44.14 Aligned_cols=32 Identities=19% Similarity=0.081 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.+.|||.|..|...|..|+++ |++|.+.++.+
T Consensus 9 ~I~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~ 40 (303)
T 3g0o_A 9 HVGIVGLGSMGMGAARSCLRA-GLSTWGADLNP 40 (303)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHHC-CCeEEEEECCH
Confidence 589999999999999999999 99999998864
No 355
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=77.16 E-value=2.1 Score=41.19 Aligned_cols=31 Identities=23% Similarity=0.352 Sum_probs=28.8
Q ss_pred EEEECC-ChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 120 FIIIGA-GSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 120 vIIVGs-G~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
|+|.|+ |..|..+|.+|+++ |++|.++.|..
T Consensus 3 ilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~ 34 (224)
T 3h2s_A 3 IAVLGATGRAGSAIVAEARRR-GHEVLAVVRDP 34 (224)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred EEEEcCCCHHHHHHHHHHHHC-CCEEEEEEecc
Confidence 899998 99999999999999 99999999863
No 356
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=77.05 E-value=1.6 Score=46.82 Aligned_cols=29 Identities=17% Similarity=0.229 Sum_probs=27.1
Q ss_pred cEEEECCChhHHHHHHHHhh-cCCCeEEEEe
Q psy7389 119 DFIIIGAGSAGCVLANRLSE-IKKWKVLLLE 148 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~-~~G~~VlVLE 148 (731)
.+.|||+|..|+..|..|++ + |++|.+++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~-G~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRD-GVEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTST-TEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCC-CCEEEEEe
Confidence 48999999999999999998 6 99999998
No 357
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=76.93 E-value=1.7 Score=47.43 Aligned_cols=33 Identities=12% Similarity=0.033 Sum_probs=29.7
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCC-eEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~-~VlVLEaG~ 151 (731)
-.|+|||+|.+|+-+|..|.+. |. +|.++++..
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~-Ga~~Vtiv~r~~ 298 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQ-GATSVKCLYRRD 298 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHT-TCSEEEEECSSC
T ss_pred CEEEEECCChhHHHHHHHHHHc-CCCEEEEEEeCC
Confidence 4699999999999999999998 87 599999875
No 358
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=76.87 E-value=1.9 Score=47.12 Aligned_cols=31 Identities=23% Similarity=0.269 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
-++|+|+|..|..+|..|+.. |.+|++.|+.
T Consensus 267 tVvVtGaGgIG~aiA~~Laa~-GA~Viv~D~~ 297 (488)
T 3ond_A 267 VAVVAGYGDVGKGCAAALKQA-GARVIVTEID 297 (488)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCEEEEEcCC
Confidence 489999999999999999999 9999999875
No 359
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=76.80 E-value=2 Score=43.80 Aligned_cols=34 Identities=35% Similarity=0.542 Sum_probs=30.4
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCC-eEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~-~VlVLEaG~ 151 (731)
..-|+|||+|..|+.+|..||.+ |. ++.|+|...
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~a-GVG~i~lvD~D~ 70 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRC-GIGKLLLFDYDK 70 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCB
T ss_pred CCeEEEECcCHHHHHHHHHHHHc-CCCEEEEECCCc
Confidence 56799999999999999999999 85 899999764
No 360
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=76.75 E-value=1.8 Score=44.75 Aligned_cols=32 Identities=19% Similarity=0.374 Sum_probs=29.0
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.|+|||+|..|+-+|..|++. | +|.++++..
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~-~-~v~~v~~~~ 195 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTV-A-ETTWITQHE 195 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTT-S-EEEEECSSC
T ss_pred CEEEEECCCcCHHHHHHHHHhh-C-CEEEEECCC
Confidence 4699999999999999999998 8 799999874
No 361
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=76.67 E-value=2 Score=46.83 Aligned_cols=32 Identities=16% Similarity=0.229 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-|.|||.|.+|+++|..|++. |++|.+.|+..
T Consensus 11 ~v~viG~G~sG~s~A~~l~~~-G~~V~~~D~~~ 42 (451)
T 3lk7_A 11 KVLVLGLARSGEAAARLLAKL-GAIVTVNDGKP 42 (451)
T ss_dssp EEEEECCTTTHHHHHHHHHHT-TCEEEEEESSC
T ss_pred EEEEEeeCHHHHHHHHHHHhC-CCEEEEEeCCc
Confidence 489999999999999999998 99999999864
No 362
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=76.54 E-value=1.7 Score=47.09 Aligned_cols=32 Identities=16% Similarity=0.211 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
..-|||.|..|+.+|..||++ |++|+++++.+
T Consensus 13 ~~~ViGlGyvGlp~A~~La~~-G~~V~~~D~~~ 44 (431)
T 3ojo_A 13 KLTVVGLGYIGLPTSIMFAKH-GVDVLGVDINQ 44 (431)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCEEEEECSCH
T ss_pred ccEEEeeCHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 478999999999999999999 99999999874
No 363
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=76.47 E-value=2 Score=43.81 Aligned_cols=34 Identities=26% Similarity=0.397 Sum_probs=30.9
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.-.+.|||.|..|...|..|+++ |++|.+.++.+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~-G~~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEW-PGGVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTS-TTCEEEECSST
T ss_pred CCeEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 34699999999999999999999 99999999864
No 364
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=76.46 E-value=2.3 Score=40.10 Aligned_cols=31 Identities=23% Similarity=0.345 Sum_probs=28.9
Q ss_pred EEEECC-ChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 120 FIIIGA-GSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 120 vIIVGs-G~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
++|+|+ |..|..+|.+|+++ |.+|+++.|.+
T Consensus 6 ilVtGatG~iG~~l~~~l~~~-g~~V~~~~r~~ 37 (206)
T 1hdo_A 6 IAIFGATGQTGLTTLAQAVQA-GYEVTVLVRDS 37 (206)
T ss_dssp EEEESTTSHHHHHHHHHHHHT-TCEEEEEESCG
T ss_pred EEEEcCCcHHHHHHHHHHHHC-CCeEEEEEeCh
Confidence 899998 99999999999999 99999999864
No 365
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=76.44 E-value=1.9 Score=44.57 Aligned_cols=31 Identities=23% Similarity=0.336 Sum_probs=28.7
Q ss_pred EEEECCChhHHHHHHHHhhcCCC--eEEEEecCC
Q psy7389 120 FIIIGAGSAGCVLANRLSEIKKW--KVLLLEAGI 151 (731)
Q Consensus 120 vIIVGsG~aG~~aA~~LA~~~G~--~VlVLEaG~ 151 (731)
+.|||+|..|...|..|+++ |+ +|+++++..
T Consensus 3 I~VIGaG~~G~~la~~l~~~-g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 3 IGIVGLGRVGSSTAFALLMK-GFAREMVLIDVDK 35 (319)
T ss_dssp EEEECCSHHHHHHHHHHHHH-TCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhC-CCCCeEEEEeCCh
Confidence 78999999999999999998 98 999999863
No 366
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=76.36 E-value=2 Score=45.43 Aligned_cols=34 Identities=24% Similarity=0.311 Sum_probs=31.0
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCC-eEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~-~VlVLEaG~ 151 (731)
+.-|||+|+|.+|..+|..|... |. +|.|+|+-+
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~-Ga~~I~v~D~~G 222 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAA-GATKVTVVDKFG 222 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHH-TCCEEEEEETTE
T ss_pred ccEEEEECCCHHHHHHHHHHHHc-CCCeEEEEECCC
Confidence 46699999999999999999998 99 999999864
No 367
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=76.34 E-value=2.3 Score=41.46 Aligned_cols=32 Identities=16% Similarity=0.261 Sum_probs=29.5
Q ss_pred cEEEECC-ChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGA-GSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGs-G~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-++|.|+ |..|..+|.+|+++ |++|+++.|..
T Consensus 23 ~ilVtGatG~iG~~l~~~L~~~-G~~V~~~~R~~ 55 (236)
T 3e8x_A 23 RVLVVGANGKVARYLLSELKNK-GHEPVAMVRNE 55 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSG
T ss_pred eEEEECCCChHHHHHHHHHHhC-CCeEEEEECCh
Confidence 3899998 99999999999999 99999999864
No 368
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=76.23 E-value=8.3 Score=39.04 Aligned_cols=30 Identities=13% Similarity=0.041 Sum_probs=26.7
Q ss_pred EEEECC-ChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 120 FIIIGA-GSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 120 vIIVGs-G~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
++|.|+ |..|..+|.+|+++ |.+|+++.+.
T Consensus 52 vlVTGas~GIG~aia~~la~~-G~~V~~~~~~ 82 (294)
T 3r3s_A 52 ALVTGGDSGIGRAAAIAYARE-GADVAINYLP 82 (294)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TCEEEEECCG
T ss_pred EEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 788886 78899999999999 9999998875
No 369
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=76.08 E-value=2.1 Score=45.26 Aligned_cols=34 Identities=18% Similarity=0.306 Sum_probs=30.9
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCC-eEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~-~VlVLEaG~ 151 (731)
+.-|+|+|+|.+|..+|..|... |. +|.|+++-+
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~-G~~~I~v~Dr~G 226 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDL-GVKNVVAVDRKG 226 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-TCCEEEEEETTE
T ss_pred CcEEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCC
Confidence 56799999999999999999998 88 899999863
No 370
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=75.90 E-value=1.3 Score=43.39 Aligned_cols=32 Identities=16% Similarity=0.062 Sum_probs=29.0
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
--++|||+|..|..+|..|.+. |. |+++|+.+
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~-g~-v~vid~~~ 41 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGS-EV-FVLAEDEN 41 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTS-EE-EEEESCGG
T ss_pred CEEEEECCChHHHHHHHHHHhC-Ce-EEEEECCH
Confidence 3499999999999999999998 99 99999864
No 371
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=75.89 E-value=2.3 Score=42.38 Aligned_cols=34 Identities=24% Similarity=0.256 Sum_probs=30.0
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCC-eEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~-~VlVLEaG~ 151 (731)
..-|+|||.|..|+.+|..|+.. |. ++.|++...
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~-Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGA-GVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHT-TCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHc-CCCeEEEEeCCC
Confidence 35699999999999999999998 87 788998764
No 372
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=75.85 E-value=2.1 Score=43.72 Aligned_cols=32 Identities=22% Similarity=0.424 Sum_probs=29.3
Q ss_pred cEEEEC-CChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIG-AGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVG-sG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-+.||| .|..|.+.|..|+++ |++|.++++.+
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~-G~~V~~~~~~~ 55 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRAS-GYPISILDRED 55 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTT-TCCEEEECTTC
T ss_pred EEEEEcCCCHHHHHHHHHHHhC-CCeEEEEECCc
Confidence 499999 999999999999998 99999998753
No 373
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=75.76 E-value=2.7 Score=43.20 Aligned_cols=33 Identities=15% Similarity=0.200 Sum_probs=30.0
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.+.|||.|..|...|..|++. |.+|.++++.+
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~-g~~V~~~~~~~ 63 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKM-GHTVTVWNRTA 63 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSG
T ss_pred CeEEEEcccHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 3599999999999999999998 99999998763
No 374
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=75.71 E-value=1.9 Score=43.68 Aligned_cols=31 Identities=19% Similarity=0.311 Sum_probs=29.2
Q ss_pred EEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 120 FIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 120 vIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
+.|||.|..|...|..|+++ |++|.+.++.+
T Consensus 4 I~iiG~G~mG~~~a~~l~~~-G~~V~~~dr~~ 34 (287)
T 3pdu_A 4 YGFLGLGIMGGPMAANLVRA-GFDVTVWNRNP 34 (287)
T ss_dssp EEEECCSTTHHHHHHHHHHH-TCCEEEECSSG
T ss_pred EEEEccCHHHHHHHHHHHHC-CCeEEEEcCCH
Confidence 88999999999999999999 99999999864
No 375
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=75.66 E-value=2.2 Score=43.63 Aligned_cols=32 Identities=19% Similarity=0.320 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-+.|||.|..|...|..|+++ |++|.+.++.+
T Consensus 5 ~I~iiG~G~mG~~~a~~l~~~-G~~V~~~d~~~ 36 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLKA-GYLLNVFDLVQ 36 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCEEEEECSSH
T ss_pred EEEEEeecHHHHHHHHHHHhC-CCeEEEEcCCH
Confidence 389999999999999999999 99999998863
No 376
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=75.63 E-value=2.4 Score=45.29 Aligned_cols=34 Identities=18% Similarity=0.177 Sum_probs=30.5
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
..-|+|||+|..|..+|..|... |.+|+++++-+
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRL-GAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHC-CCEEEEEcCCH
Confidence 35699999999999999999888 99999999864
No 377
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=75.44 E-value=2.2 Score=43.93 Aligned_cols=31 Identities=26% Similarity=0.344 Sum_probs=28.6
Q ss_pred EEEECCChhHHHHHHHHhhcCC--CeEEEEecCC
Q psy7389 120 FIIIGAGSAGCVLANRLSEIKK--WKVLLLEAGI 151 (731)
Q Consensus 120 vIIVGsG~aG~~aA~~LA~~~G--~~VlVLEaG~ 151 (731)
+.|||+|..|..+|..|+++ | .+|.++++..
T Consensus 4 I~VIGaG~~G~~la~~L~~~-g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 4 IGIIGLGNVGAAVAHGLIAQ-GVADDYVFIDANE 36 (309)
T ss_dssp EEEECCSHHHHHHHHHHHHH-TCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhC-CCCCEEEEEcCCH
Confidence 88999999999999999998 8 7999999864
No 378
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=75.41 E-value=2.2 Score=44.16 Aligned_cols=32 Identities=25% Similarity=0.427 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.+.|||.|..|...|..|+++ |++|++.++.+
T Consensus 33 ~I~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~ 64 (320)
T 4dll_A 33 KITFLGTGSMGLPMARRLCEA-GYALQVWNRTP 64 (320)
T ss_dssp EEEEECCTTTHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEECccHHHHHHHHHHHhC-CCeEEEEcCCH
Confidence 599999999999999999999 99999999864
No 379
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=75.10 E-value=2.3 Score=42.33 Aligned_cols=30 Identities=17% Similarity=0.461 Sum_probs=28.3
Q ss_pred EEEECCChhHHHHHHHHhhcCC-CeEEEEecC
Q psy7389 120 FIIIGAGSAGCVLANRLSEIKK-WKVLLLEAG 150 (731)
Q Consensus 120 vIIVGsG~aG~~aA~~LA~~~G-~~VlVLEaG 150 (731)
+.|||.|..|...|..|+++ | .+|.+.++.
T Consensus 3 i~iiG~G~mG~~~a~~l~~~-g~~~v~~~~r~ 33 (263)
T 1yqg_A 3 VYFLGGGNMAAAVAGGLVKQ-GGYRIYIANRG 33 (263)
T ss_dssp EEEECCSHHHHHHHHHHHHH-CSCEEEEECSS
T ss_pred EEEECchHHHHHHHHHHHHC-CCCeEEEECCC
Confidence 78999999999999999999 9 999999876
No 380
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=74.87 E-value=2.4 Score=43.78 Aligned_cols=32 Identities=19% Similarity=0.235 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhhcCC-CeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKK-WKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G-~~VlVLEaG~ 151 (731)
.+.|||.|..|...|..|+++ | ++|.+.++.+
T Consensus 26 ~IgvIG~G~mG~~lA~~L~~~-G~~~V~~~dr~~ 58 (317)
T 4ezb_A 26 TIAFIGFGEAAQSIAGGLGGR-NAARLAAYDLRF 58 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-TCSEEEEECGGG
T ss_pred eEEEECccHHHHHHHHHHHHc-CCCeEEEEeCCC
Confidence 499999999999999999999 9 9999999874
No 381
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=74.76 E-value=2.4 Score=44.82 Aligned_cols=33 Identities=21% Similarity=0.326 Sum_probs=29.7
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
--|+|+|+|..|..+|..|+.. |.+|+++++.+
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~-Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGM-GAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 3599999999999999999998 99999999763
No 382
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=74.68 E-value=2.3 Score=45.06 Aligned_cols=34 Identities=15% Similarity=0.141 Sum_probs=30.6
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.--|+|||+|..|..+|..|... |.+|+++++.+
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRL-GAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHH-TCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 35699999999999999999988 99999999864
No 383
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=74.68 E-value=2.5 Score=42.53 Aligned_cols=31 Identities=19% Similarity=0.227 Sum_probs=28.6
Q ss_pred EEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 120 FIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 120 vIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
+.|||+|..|...|..|++. |++|.++++.+
T Consensus 3 i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~~ 33 (279)
T 2f1k_A 3 IGVVGLGLIGASLAGDLRRR-GHYLIGVSRQQ 33 (279)
T ss_dssp EEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEcCcHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 78999999999999999998 99999998753
No 384
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=74.66 E-value=1.8 Score=45.82 Aligned_cols=32 Identities=13% Similarity=0.163 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHhhcCC-------CeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKK-------WKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G-------~~VlVLEaG~ 151 (731)
-+.|||+|..|...|..|+++ | .+|.++++.+
T Consensus 23 kI~iIGaG~mG~alA~~L~~~-G~~~~~~~~~V~~~~r~~ 61 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTN-AKNNYLFENEVRMWIRDE 61 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-HHHCTTBCSCEEEECCSC
T ss_pred EEEEECcCHHHHHHHHHHHHc-CCccCCCCCeEEEEECCh
Confidence 399999999999999999999 9 9999999865
No 385
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=74.59 E-value=2.6 Score=42.43 Aligned_cols=33 Identities=27% Similarity=0.364 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
--++|||+|.+|..+|..|++. |.+|.|+.|..
T Consensus 119 k~vlvlGaGGaaraia~~L~~~-G~~v~V~nRt~ 151 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQ-GLQVSVLNRSS 151 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 4599999999999999999999 89999998864
No 386
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=74.58 E-value=1.9 Score=46.92 Aligned_cols=58 Identities=12% Similarity=0.082 Sum_probs=40.9
Q ss_pred ChhhhccHhhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEeCCEEEEEEeccEEEecccCC
Q psy7389 307 STNGAFIRPIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAI 375 (731)
Q Consensus 307 s~~~~~L~~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~~g~~~~i~A~k~VVLAAGai 375 (731)
......|.+.++ ..|++|++++.|++|..+.+++ ++++|.. ++. +++|+ .||+|+|..
T Consensus 242 ~~l~~al~~~~~-~~G~~i~~~~~V~~i~~~~~~~-----~~~~V~~--~g~--~~~ad-~VV~a~~~~ 299 (453)
T 2bcg_G 242 GELPQGFARLSA-IYGGTYMLDTPIDEVLYKKDTG-----KFEGVKT--KLG--TFKAP-LVIADPTYF 299 (453)
T ss_dssp THHHHHHHHHHH-HTTCEEECSCCCCEEEEETTTT-----EEEEEEE--TTE--EEECS-CEEECGGGC
T ss_pred HHHHHHHHHHHH-HcCCEEECCCEEEEEEEECCCC-----eEEEEEE--CCe--EEECC-EEEECCCcc
Confidence 333334555555 5799999999999999862123 7778765 343 58898 599999975
No 387
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=74.26 E-value=1.8 Score=45.29 Aligned_cols=32 Identities=19% Similarity=0.221 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHhhcCC-------CeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKK-------WKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G-------~~VlVLEaG~ 151 (731)
-+.|||+|..|...|..|+++ | .+|.++++.+
T Consensus 10 kI~iIG~G~mG~~~a~~l~~~-g~~~~~~~~~V~~~~r~~ 48 (354)
T 1x0v_A 10 KVCIVGSGNWGSAIAKIVGGN-AAQLAQFDPRVTMWVFEE 48 (354)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-HHHCTTEEEEEEEECCCC
T ss_pred eEEEECCCHHHHHHHHHHHhc-CCcccCCCCeEEEEEcCh
Confidence 499999999999999999998 8 8999999865
No 388
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=74.15 E-value=2.8 Score=43.43 Aligned_cols=32 Identities=22% Similarity=0.457 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHHHHhhcCCC-eEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~-~VlVLEaG~ 151 (731)
-|.|||+|..|..+|..|+.. |+ +|+++|.-.
T Consensus 6 kI~VIGaG~vG~~ia~~la~~-g~~~v~L~Di~~ 38 (322)
T 1t2d_A 6 KIVLVGSGMIGGVMATLIVQK-NLGDVVLFDIVK 38 (322)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCeEEEEeCCH
Confidence 499999999999999999998 88 999999754
No 389
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=74.01 E-value=2 Score=43.33 Aligned_cols=32 Identities=22% Similarity=0.296 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-++|+|+|.+|..+|..|++. |.+|.|..|..
T Consensus 121 ~vlvlGaGg~g~a~a~~L~~~-G~~v~v~~R~~ 152 (272)
T 1p77_A 121 HVLILGAGGATKGVLLPLLQA-QQNIVLANRTF 152 (272)
T ss_dssp EEEEECCSHHHHTTHHHHHHT-TCEEEEEESSH
T ss_pred EEEEECCcHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 499999999999999999999 99999998863
No 390
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=73.93 E-value=2.7 Score=43.47 Aligned_cols=31 Identities=29% Similarity=0.423 Sum_probs=29.1
Q ss_pred cEEEECCChhHHHHHHHHhhcCCC-eEEEEecC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAG 150 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~-~VlVLEaG 150 (731)
-|.|||+|..|..+|..|+.. |+ .|+++|.-
T Consensus 10 kv~ViGaG~vG~~ia~~l~~~-g~~~v~l~D~~ 41 (315)
T 3tl2_A 10 KVSVIGAGFTGATTAFLLAQK-ELADVVLVDIP 41 (315)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEEECCG
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCeEEEEecc
Confidence 499999999999999999998 99 99999986
No 391
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=73.83 E-value=2.6 Score=44.37 Aligned_cols=37 Identities=16% Similarity=0.264 Sum_probs=31.1
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 114 GDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 114 ~~~~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
|...-.+.|||.|..|...|..|+++ |++|++.++.+
T Consensus 19 Mm~~mkIgiIGlG~mG~~~A~~L~~~-G~~V~v~dr~~ 55 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGADMVRRLRKG-GHECVVYDLNV 55 (358)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred hhcCCEEEEECchHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 33345799999999999999999999 99999999863
No 392
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=73.72 E-value=2.8 Score=40.28 Aligned_cols=31 Identities=23% Similarity=0.426 Sum_probs=28.7
Q ss_pred EEEEC-CChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 120 FIIIG-AGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 120 vIIVG-sG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
|+|.| +|..|..++.+|+++ |++|+++.|..
T Consensus 3 ilItGatG~iG~~l~~~L~~~-g~~V~~~~R~~ 34 (219)
T 3dqp_A 3 IFIVGSTGRVGKSLLKSLSTT-DYQIYAGARKV 34 (219)
T ss_dssp EEEESTTSHHHHHHHHHHTTS-SCEEEEEESSG
T ss_pred EEEECCCCHHHHHHHHHHHHC-CCEEEEEECCc
Confidence 78999 699999999999999 99999999874
No 393
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=73.51 E-value=2.2 Score=49.61 Aligned_cols=33 Identities=15% Similarity=0.120 Sum_probs=30.4
Q ss_pred ccEEEEC--CChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIG--AGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVG--sG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.|+||| +|..|+-+|..|++. |.+|.|+|+++
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~-G~~Vtlv~~~~ 563 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATA-GHEVTIVSGVH 563 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHT-TCEEEEEESSC
T ss_pred CeEEEEcCCCCchHHHHHHHHHHc-CCEEEEEeccc
Confidence 3699998 999999999999998 99999999974
No 394
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=73.48 E-value=3 Score=40.13 Aligned_cols=31 Identities=23% Similarity=0.319 Sum_probs=28.1
Q ss_pred EEEEC-CChhHHHHHHHHh-hcCCCeEEEEecCC
Q psy7389 120 FIIIG-AGSAGCVLANRLS-EIKKWKVLLLEAGI 151 (731)
Q Consensus 120 vIIVG-sG~aG~~aA~~LA-~~~G~~VlVLEaG~ 151 (731)
++|.| +|..|..+|.+|+ ++ |++|+++.|.+
T Consensus 8 vlVtGasg~iG~~~~~~l~~~~-g~~V~~~~r~~ 40 (221)
T 3r6d_A 8 ITILGAAGQIAQXLTATLLTYT-DMHITLYGRQL 40 (221)
T ss_dssp EEEESTTSHHHHHHHHHHHHHC-CCEEEEEESSH
T ss_pred EEEEeCCcHHHHHHHHHHHhcC-CceEEEEecCc
Confidence 89999 5999999999999 77 99999999864
No 395
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=73.46 E-value=2.8 Score=42.54 Aligned_cols=31 Identities=19% Similarity=0.219 Sum_probs=28.6
Q ss_pred cEEEEC-CChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 119 DFIIIG-AGSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 119 DvIIVG-sG~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
-++|+| +|..|..+|..|++. |.+|+++.|.
T Consensus 121 ~vlVtGaaGGiG~aia~~L~~~-G~~V~i~~R~ 152 (287)
T 1lu9_A 121 KAVVLAGTGPVGMRSAALLAGE-GAEVVLCGRK 152 (287)
T ss_dssp EEEEETCSSHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred EEEEECCCcHHHHHHHHHHHHC-cCEEEEEECC
Confidence 489999 899999999999999 9999999875
No 396
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=73.40 E-value=3.2 Score=40.70 Aligned_cols=31 Identities=23% Similarity=0.379 Sum_probs=28.2
Q ss_pred EEEECC-ChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 120 FIIIGA-GSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 120 vIIVGs-G~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
++|.|+ |..|..+|.+|+++ |.+|+++.|..
T Consensus 4 vlVtGasg~iG~~l~~~L~~~-g~~V~~~~r~~ 35 (255)
T 2dkn_A 4 IAITGSASGIGAALKELLARA-GHTVIGIDRGQ 35 (255)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred EEEeCCCcHHHHHHHHHHHhC-CCEEEEEeCCh
Confidence 788887 99999999999998 99999999863
No 397
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=73.33 E-value=2.6 Score=43.42 Aligned_cols=31 Identities=23% Similarity=0.298 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHHHHhhcCCC-eEEEEecC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAG 150 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~-~VlVLEaG 150 (731)
.|.|||.|..|...|..|+++ |+ +|.+.++.
T Consensus 26 ~I~iIG~G~mG~~~A~~L~~~-G~~~V~~~dr~ 57 (312)
T 3qsg_A 26 KLGFIGFGEAASAIASGLRQA-GAIDMAAYDAA 57 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-SCCEEEEECSS
T ss_pred EEEEECccHHHHHHHHHHHHC-CCCeEEEEcCC
Confidence 599999999999999999999 99 99999984
No 398
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=73.29 E-value=2.7 Score=46.96 Aligned_cols=35 Identities=14% Similarity=0.252 Sum_probs=31.7
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCCCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE 153 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~~~ 153 (731)
-.|+|||+|.+|+-+|..|++. |.+|.|++|.+.+
T Consensus 187 k~V~VIG~G~sg~e~a~~l~~~-~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 187 QRVGVIGTGSSGIQVSPQIAKQ-AAELFVFQRTPHF 221 (542)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-BSEEEEEESSCCC
T ss_pred CEEEEECCCccHHHHHHHHhhc-CceEEEEEcCCcc
Confidence 4699999999999999999998 9999999998643
No 399
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=73.21 E-value=3.8 Score=42.19 Aligned_cols=32 Identities=19% Similarity=0.323 Sum_probs=29.0
Q ss_pred cEEEECC-ChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGA-GSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGs-G~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-|+|.|+ |+.|..+|.+|+++ |++|+++.|..
T Consensus 22 ~vlVTGasG~iG~~l~~~L~~~-g~~V~~~~r~~ 54 (330)
T 2pzm_A 22 RILITGGAGCLGSNLIEHWLPQ-GHEILVIDNFA 54 (330)
T ss_dssp EEEEETTTSHHHHHHHHHHGGG-TCEEEEEECCS
T ss_pred EEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCC
Confidence 3899997 99999999999999 99999999853
No 400
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=73.08 E-value=2.8 Score=44.15 Aligned_cols=33 Identities=18% Similarity=0.317 Sum_probs=29.7
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
--|+|+|+|.+|..+|..|... |.+|+++++.+
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~-Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGL-GAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 4599999999999999999998 99999999863
No 401
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=73.03 E-value=2.9 Score=42.80 Aligned_cols=32 Identities=16% Similarity=0.237 Sum_probs=29.1
Q ss_pred cEEEECCChhHHHHHHHHhhcCCC-eEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~-~VlVLEaG~ 151 (731)
.++|||+|.+|..+|..|++. |. +|.|..|..
T Consensus 143 ~vlVlGaGg~g~aia~~L~~~-G~~~V~v~nR~~ 175 (297)
T 2egg_A 143 RILVIGAGGGARGIYFSLLST-AAERIDMANRTV 175 (297)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-TCSEEEEECSSH
T ss_pred EEEEECcHHHHHHHHHHHHHC-CCCEEEEEeCCH
Confidence 599999999999999999998 97 999998763
No 402
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=72.85 E-value=2.4 Score=49.21 Aligned_cols=32 Identities=31% Similarity=0.403 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-|.|||+|..|...|..|+++ |++|+++|+.+
T Consensus 314 kV~VIGaG~MG~~iA~~la~a-G~~V~l~D~~~ 345 (725)
T 2wtb_A 314 KVAIIGGGLMGSGIATALILS-NYPVILKEVNE 345 (725)
T ss_dssp CEEEECCSHHHHHHHHHHHTT-TCCEEEECSSH
T ss_pred EEEEEcCCHhhHHHHHHHHhC-CCEEEEEECCH
Confidence 399999999999999999999 99999999864
No 403
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=72.84 E-value=2 Score=46.66 Aligned_cols=31 Identities=16% Similarity=0.246 Sum_probs=29.0
Q ss_pred EEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 120 FIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 120 vIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
|.|||.|.+|+++|..|++. |++|.+.|...
T Consensus 8 v~viG~G~~G~~~a~~l~~~-G~~v~~~D~~~ 38 (439)
T 2x5o_A 8 VVIIGLGLTGLSCVDFFLAR-GVTPRVMDTRM 38 (439)
T ss_dssp EEEECCHHHHHHHHHHHHTT-TCCCEEEESSS
T ss_pred EEEEeecHHHHHHHHHHHhC-CCEEEEEECCC
Confidence 89999999999999999998 99999999864
No 404
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=72.81 E-value=2.6 Score=42.81 Aligned_cols=30 Identities=23% Similarity=0.431 Sum_probs=27.8
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
-++|+|+|..|..+|..|++. | +|+|+.|.
T Consensus 130 ~vlV~GaGgiG~aia~~L~~~-G-~V~v~~r~ 159 (287)
T 1nvt_A 130 NIVIYGAGGAARAVAFELAKD-N-NIIIANRT 159 (287)
T ss_dssp EEEEECCSHHHHHHHHHHTSS-S-EEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHC-C-CEEEEECC
Confidence 499999999999999999999 9 99999875
No 405
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=72.75 E-value=3.2 Score=42.68 Aligned_cols=32 Identities=34% Similarity=0.480 Sum_probs=28.7
Q ss_pred EEEECCChhHHHHHHHHhhc-CCCeEEEEecCC
Q psy7389 120 FIIIGAGSAGCVLANRLSEI-KKWKVLLLEAGI 151 (731)
Q Consensus 120 vIIVGsG~aG~~aA~~LA~~-~G~~VlVLEaG~ 151 (731)
+.|||+|..|...|..|++. .|.+|+++|+..
T Consensus 3 I~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 3 ITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 78999999999999999995 278999999864
No 406
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=72.62 E-value=2.9 Score=42.54 Aligned_cols=32 Identities=16% Similarity=0.275 Sum_probs=29.3
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.+.|||.|..|...|..|++. |++|.++++.+
T Consensus 7 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~~ 38 (299)
T 1vpd_A 7 KVGFIGLGIMGKPMSKNLLKA-GYSLVVSDRNP 38 (299)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCEEEEECSCH
T ss_pred eEEEECchHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 499999999999999999998 99999998763
No 407
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=72.62 E-value=2.9 Score=42.58 Aligned_cols=32 Identities=22% Similarity=0.201 Sum_probs=29.3
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
-.+.|||.|..|...|..|++. |++|.++++.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~ 36 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKE-GVTVYAFDLM 36 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHT-TCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHC-CCeEEEEeCC
Confidence 3599999999999999999998 9999999875
No 408
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=72.57 E-value=2.9 Score=42.26 Aligned_cols=32 Identities=19% Similarity=0.401 Sum_probs=29.4
Q ss_pred cEEEECC-ChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGA-GSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGs-G~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-+.|||+ |..|...|..|+++ |++|.++++.+
T Consensus 13 ~I~iIG~tG~mG~~la~~l~~~-g~~V~~~~r~~ 45 (286)
T 3c24_A 13 TVAILGAGGKMGARITRKIHDS-AHHLAAIEIAP 45 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHHHS-SSEEEEECCSH
T ss_pred EEEEECCCCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 4999999 99999999999998 99999999763
No 409
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=72.53 E-value=1.7 Score=42.31 Aligned_cols=32 Identities=31% Similarity=0.575 Sum_probs=28.9
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEE-EecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLL-LEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlV-LEaG~ 151 (731)
-+.|||+|..|...|..|+++ |++|++ .++.+
T Consensus 25 kI~IIG~G~mG~~la~~l~~~-g~~V~~v~~r~~ 57 (220)
T 4huj_A 25 TYAIIGAGAIGSALAERFTAA-QIPAIIANSRGP 57 (220)
T ss_dssp CEEEEECHHHHHHHHHHHHHT-TCCEEEECTTCG
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCEEEEEECCCH
Confidence 499999999999999999998 999998 77753
No 410
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=72.48 E-value=3 Score=43.89 Aligned_cols=34 Identities=18% Similarity=0.373 Sum_probs=30.3
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCC-eEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~-~VlVLEaG~ 151 (731)
..-|+|||+|..|+.+|..||.+ |. ++.|++...
T Consensus 118 ~~~VlvvG~GglGs~va~~La~a-Gvg~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATS-GIGEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-TCSEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhC-CCCeEEEECCCc
Confidence 45699999999999999999999 86 799999764
No 411
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=72.16 E-value=3.1 Score=41.93 Aligned_cols=30 Identities=23% Similarity=0.418 Sum_probs=28.0
Q ss_pred EEEECCChhHHHHHHHHhhcCCC--eEEEEecC
Q psy7389 120 FIIIGAGSAGCVLANRLSEIKKW--KVLLLEAG 150 (731)
Q Consensus 120 vIIVGsG~aG~~aA~~LA~~~G~--~VlVLEaG 150 (731)
+.|||.|..|...|..|++. |+ +|++.++.
T Consensus 4 I~iIG~G~mG~~~a~~l~~~-g~~~~V~~~d~~ 35 (281)
T 2g5c_A 4 VLIVGVGFMGGSFAKSLRRS-GFKGKIYGYDIN 35 (281)
T ss_dssp EEEESCSHHHHHHHHHHHHT-TCCSEEEEECSC
T ss_pred EEEEecCHHHHHHHHHHHhc-CCCcEEEEEeCC
Confidence 88999999999999999998 98 99999875
No 412
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=72.15 E-value=3 Score=43.01 Aligned_cols=32 Identities=22% Similarity=0.388 Sum_probs=29.4
Q ss_pred cEEEECCChhHHHHHHHHhhcCCC--eEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKW--KVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~--~VlVLEaG~ 151 (731)
-+.|||.|..|.+.|..|+++ |. +|++.++.+
T Consensus 35 kI~IIG~G~mG~slA~~l~~~-G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 35 NVLIVGVGFMGGSFAKSLRRS-GFKGKIYGYDINP 68 (314)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-TCCSEEEEECSCH
T ss_pred EEEEEeeCHHHHHHHHHHHhC-CCCCEEEEEECCH
Confidence 499999999999999999998 99 999999863
No 413
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=71.97 E-value=3.1 Score=42.78 Aligned_cols=32 Identities=31% Similarity=0.426 Sum_probs=28.6
Q ss_pred cEEEECCChhHHHHHHHHhhcCCC-eEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~-~VlVLEaG~ 151 (731)
-|.|||+|..|...|..|+.. |+ +|.++|.-.
T Consensus 4 kI~VIGaG~vG~~~a~~la~~-g~~~v~L~Di~~ 36 (309)
T 1ur5_A 4 KISIIGAGFVGSTTAHWLAAK-ELGDIVLLDIVE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCCeEEEEeCCc
Confidence 389999999999999999998 86 999999753
No 414
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=71.89 E-value=4 Score=40.24 Aligned_cols=30 Identities=20% Similarity=0.269 Sum_probs=27.0
Q ss_pred EEEECC-ChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 120 FIIIGA-GSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 120 vIIVGs-G~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
++|.|+ |..|..+|.+|+++ |.+|+++.|.
T Consensus 22 vlVTGas~gIG~~~a~~l~~~-G~~V~~~~r~ 52 (249)
T 1o5i_A 22 VLVLAASRGIGRAVADVLSQE-GAEVTICARN 52 (249)
T ss_dssp EEEESCSSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred EEEECCCCHHHHHHHHHHHHC-CCEEEEEcCC
Confidence 788886 78899999999999 9999999875
No 415
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=71.88 E-value=2.5 Score=42.14 Aligned_cols=31 Identities=19% Similarity=0.180 Sum_probs=28.0
Q ss_pred EEEECC-C-hhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 120 FIIIGA-G-SAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 120 vIIVGs-G-~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
++|.|+ | ..|..+|.+|+++ |.+|+++.+..
T Consensus 25 vlITGasg~GIG~~~a~~l~~~-G~~V~~~~r~~ 57 (266)
T 3o38_A 25 VLVTAAAGTGIGSTTARRALLE-GADVVISDYHE 57 (266)
T ss_dssp EEESSCSSSSHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred EEEECCCCCchHHHHHHHHHHC-CCEEEEecCCH
Confidence 899998 7 5999999999999 99999998763
No 416
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=71.68 E-value=3.1 Score=44.59 Aligned_cols=33 Identities=21% Similarity=0.259 Sum_probs=29.5
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
--|+|||+|.+|+.+|..|... |.+|+++++.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~-Ga~V~v~D~~~ 205 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSL-GAIVRAFDTRP 205 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCH
Confidence 4599999999999999998887 99999999864
No 417
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=71.68 E-value=3.1 Score=46.65 Aligned_cols=34 Identities=24% Similarity=0.557 Sum_probs=30.4
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCC-eEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~-~VlVLEaG~ 151 (731)
..-|+|||+|..|+.+|..||.. |. ++.|+|...
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~a-GVG~ItLvD~D~ 360 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAW-GVRKITFVDNGT 360 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCC
Confidence 45699999999999999999999 86 789999774
No 418
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=71.65 E-value=3.1 Score=42.19 Aligned_cols=31 Identities=19% Similarity=0.308 Sum_probs=28.7
Q ss_pred EEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 120 FIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 120 vIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
+.|||.|..|...|..|+++ |++|.+.++.+
T Consensus 3 i~iiG~G~mG~~~a~~l~~~-g~~V~~~~~~~ 33 (296)
T 2gf2_A 3 VGFIGLGNMGNPMAKNLMKH-GYPLIIYDVFP 33 (296)
T ss_dssp EEEECCSTTHHHHHHHHHHT-TCCEEEECSST
T ss_pred EEEEeccHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 78999999999999999998 99999998753
No 419
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=71.45 E-value=3.2 Score=43.73 Aligned_cols=32 Identities=16% Similarity=0.292 Sum_probs=29.1
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
--|+|+|.|..|..+|..|.+. |.+|+|.++.
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~-GakVvv~D~~ 205 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTE-GAKLVVTDVN 205 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSC
T ss_pred CEEEEECchHHHHHHHHHHHHC-CCEEEEEcCC
Confidence 3499999999999999999999 9999998864
No 420
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=71.40 E-value=3.4 Score=42.61 Aligned_cols=32 Identities=16% Similarity=0.183 Sum_probs=29.0
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCC-eEEEEecC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAG 150 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~-~VlVLEaG 150 (731)
--++|+|+|.+|..+|..|++. |. +|.|+.|.
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~-Ga~~V~i~nR~ 187 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALD-GVKEISIFNRK 187 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCSEEEEEECS
T ss_pred CEEEEECCChHHHHHHHHHHHC-CCCEEEEEECC
Confidence 3599999999999999999998 98 89999886
No 421
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=71.10 E-value=3.3 Score=46.40 Aligned_cols=34 Identities=24% Similarity=0.557 Sum_probs=30.3
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCC-eEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~-~VlVLEaG~ 151 (731)
..-|+|||+|..|+.+|..||.. |. ++.|+|...
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~a-GVG~ItLvD~D~ 361 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAW-GVRKITFVDNGT 361 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TCCEEEEECCSB
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCc
Confidence 45699999999999999999999 87 799999764
No 422
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=70.97 E-value=3.4 Score=43.86 Aligned_cols=32 Identities=31% Similarity=0.441 Sum_probs=29.2
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
--|+|||+|..|..+|..|... |.+|+++++.
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~-Ga~V~~~d~~ 200 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGM-GATVTVLDIN 200 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCC
Confidence 3599999999999999999888 9999999975
No 423
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=70.96 E-value=3.5 Score=41.86 Aligned_cols=33 Identities=21% Similarity=0.260 Sum_probs=29.1
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCC-eEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~-~VlVLEaG~ 151 (731)
--++|+|+|.+|..+|..|++. |. +|.|+.|..
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~-G~~~v~i~~R~~ 161 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTH-GVQKLQVADLDT 161 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSSH
T ss_pred CEEEEECCcHHHHHHHHHHHHC-CCCEEEEEECCH
Confidence 3599999999999999999998 98 799998763
No 424
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=70.88 E-value=3.2 Score=42.60 Aligned_cols=33 Identities=27% Similarity=0.449 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.+.|||.|..|...|..|+++ |++|++.++.+
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~-G~~V~~~dr~~ 42 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQ-GKRVAIWNRSP 42 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSH
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 3599999999999999999999 99999998863
No 425
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=70.33 E-value=3.2 Score=48.13 Aligned_cols=32 Identities=19% Similarity=0.313 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-|.|||+|..|.-.|..+|.+ |+.|+++|..+
T Consensus 318 ~v~ViGaG~MG~gIA~~~a~a-G~~V~l~D~~~ 349 (742)
T 3zwc_A 318 SVGVLGLGTMGRGIAISFARV-GISVVAVESDP 349 (742)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-TCEEEEECSSH
T ss_pred EEEEEcccHHHHHHHHHHHhC-CCchhcccchH
Confidence 489999999999999999999 99999999763
No 426
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=70.30 E-value=3.5 Score=41.62 Aligned_cols=32 Identities=25% Similarity=0.332 Sum_probs=29.4
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.++|||+|..|..+|..|++. |.+|.|.+|..
T Consensus 131 ~v~iiGaG~~g~aia~~L~~~-g~~V~v~~r~~ 162 (275)
T 2hk9_A 131 SILVLGAGGASRAVIYALVKE-GAKVFLWNRTK 162 (275)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHc-CCEEEEEECCH
Confidence 599999999999999999998 89999998863
No 427
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=70.20 E-value=3.5 Score=41.94 Aligned_cols=31 Identities=29% Similarity=0.287 Sum_probs=29.3
Q ss_pred EEEECC-ChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 120 FIIIGA-GSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 120 vIIVGs-G~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
|+|.|+ |+.|..++.+|+++ |++|+++.|..
T Consensus 10 vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~ 41 (321)
T 3vps_A 10 ILITGGAGFIGGHLARALVAS-GEEVTVLDDLR 41 (321)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TCCEEEECCCS
T ss_pred EEEECCCChHHHHHHHHHHHC-CCEEEEEecCC
Confidence 899998 99999999999999 99999999875
No 428
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=69.95 E-value=3.1 Score=41.41 Aligned_cols=29 Identities=28% Similarity=0.232 Sum_probs=26.8
Q ss_pred EEEECCChhHHHHHHHHhhcCCCeEEEEec
Q psy7389 120 FIIIGAGSAGCVLANRLSEIKKWKVLLLEA 149 (731)
Q Consensus 120 vIIVGsG~aG~~aA~~LA~~~G~~VlVLEa 149 (731)
+.|||.|..|...|..|+++ |++|.+.++
T Consensus 3 I~iIG~G~mG~~la~~l~~~-g~~V~~~~~ 31 (264)
T 1i36_A 3 VGFIGFGEVAQTLASRLRSR-GVEVVTSLE 31 (264)
T ss_dssp EEEESCSHHHHHHHHHHHHT-TCEEEECCT
T ss_pred EEEEechHHHHHHHHHHHHC-CCeEEEeCC
Confidence 78999999999999999998 999999765
No 429
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=69.84 E-value=3.3 Score=45.47 Aligned_cols=32 Identities=28% Similarity=0.428 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.+.|||.|..|...|..|+++ |++|.+.++.+
T Consensus 3 kIgVIG~G~mG~~lA~~La~~-G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEK-GFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 489999999999999999998 99999998753
No 430
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=69.68 E-value=1.6 Score=42.86 Aligned_cols=30 Identities=27% Similarity=0.335 Sum_probs=28.1
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEec
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEA 149 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEa 149 (731)
.+.|||.|..|.+.|..|+++ |++|+++.+
T Consensus 8 kI~IIG~G~~G~sLA~~L~~~-G~~V~~~~~ 37 (232)
T 3dfu_A 8 RVGIFDDGSSTVNMAEKLDSV-GHYVTVLHA 37 (232)
T ss_dssp EEEEECCSCCCSCHHHHHHHT-TCEEEECSS
T ss_pred EEEEEeeCHHHHHHHHHHHHC-CCEEEEecC
Confidence 489999999999999999999 999999886
No 431
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=69.67 E-value=3.4 Score=45.45 Aligned_cols=33 Identities=15% Similarity=0.279 Sum_probs=29.3
Q ss_pred cEEEECCChhHHHHHHHHhhc-CCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEI-KKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~-~G~~VlVLEaG~ 151 (731)
-+.|||.|..|+..|..|+++ +|++|+++++.+
T Consensus 11 kI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 11 KVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp EEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 499999999999999999997 368999999753
No 432
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=69.54 E-value=3.4 Score=44.21 Aligned_cols=30 Identities=23% Similarity=0.261 Sum_probs=27.6
Q ss_pred EEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 120 FIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 120 vIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
+.|||.|..|+..|..|++ |++|+++++.+
T Consensus 3 I~VIG~G~vG~~~A~~La~--G~~V~~~d~~~ 32 (402)
T 1dlj_A 3 IAVAGSGYVGLSLGVLLSL--QNEVTIVDILP 32 (402)
T ss_dssp EEEECCSHHHHHHHHHHTT--TSEEEEECSCH
T ss_pred EEEECCCHHHHHHHHHHhC--CCEEEEEECCH
Confidence 7899999999999999997 89999999853
No 433
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=69.52 E-value=3.4 Score=45.40 Aligned_cols=34 Identities=15% Similarity=0.198 Sum_probs=30.9
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
+-++.|||.|..|...|..|+++ |++|.+.+|.+
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~-G~~V~v~~r~~ 48 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESR-GYTVSIFNRSR 48 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTT-TCCEEEECSSH
T ss_pred CCeEEEEccHHHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 45799999999999999999998 99999998863
No 434
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=69.50 E-value=3.4 Score=39.80 Aligned_cols=32 Identities=25% Similarity=0.347 Sum_probs=29.2
Q ss_pred cEEEECC-ChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGA-GSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGs-G~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-|+|+|+ |..|..++.+|+++ |.+|.++.|.+
T Consensus 6 ~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r~~ 38 (227)
T 3dhn_A 6 KIVLIGASGFVGSALLNEALNR-GFEVTAVVRHP 38 (227)
T ss_dssp EEEEETCCHHHHHHHHHHHHTT-TCEEEEECSCG
T ss_pred EEEEEcCCchHHHHHHHHHHHC-CCEEEEEEcCc
Confidence 3899995 99999999999999 99999999874
No 435
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=69.14 E-value=3.6 Score=40.08 Aligned_cols=31 Identities=23% Similarity=0.356 Sum_probs=28.5
Q ss_pred EEEEC-CChhHHHHHHHHhhcCC-CeEEEEecCC
Q psy7389 120 FIIIG-AGSAGCVLANRLSEIKK-WKVLLLEAGI 151 (731)
Q Consensus 120 vIIVG-sG~aG~~aA~~LA~~~G-~~VlVLEaG~ 151 (731)
++|.| +|..|..+|.+|+++ | ++|+++.|.+
T Consensus 26 vlVtGatG~iG~~l~~~L~~~-G~~~V~~~~R~~ 58 (236)
T 3qvo_A 26 VLILGAGGQIARHVINQLADK-QTIKQTLFARQP 58 (236)
T ss_dssp EEEETTTSHHHHHHHHHHTTC-TTEEEEEEESSG
T ss_pred EEEEeCCcHHHHHHHHHHHhC-CCceEEEEEcCh
Confidence 89999 599999999999999 9 8999999864
No 436
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=68.89 E-value=4.2 Score=41.42 Aligned_cols=33 Identities=18% Similarity=0.292 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
--+.|||.|..|..+|..|... |.+|++.++..
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~dr~~ 188 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAAL-GAKVKVGARES 188 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSH
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 3599999999999999999988 99999999863
No 437
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=68.86 E-value=3.5 Score=40.92 Aligned_cols=32 Identities=16% Similarity=0.307 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHHHHhhcCC----CeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKK----WKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G----~~VlVLEaG~ 151 (731)
-+.|||.|..|...|..|+++ | .+|.+.++.+
T Consensus 6 ~i~iiG~G~mG~~~a~~l~~~-g~~~~~~v~~~~~~~ 41 (262)
T 2rcy_A 6 KLGFMGLGQMGSALAHGIANA-NIIKKENLFYYGPSK 41 (262)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-TSSCGGGEEEECSSC
T ss_pred EEEEECcCHHHHHHHHHHHHC-CCCCCCeEEEEeCCc
Confidence 499999999999999999998 8 7999998764
No 438
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=68.84 E-value=2.8 Score=48.55 Aligned_cols=32 Identities=19% Similarity=0.238 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-|.|||+|..|...|..|+++ |++|+++|+.+
T Consensus 316 kV~VIGaG~MG~~iA~~la~a-G~~V~l~D~~~ 347 (715)
T 1wdk_A 316 QAAVLGAGIMGGGIAYQSASK-GTPILMKDINE 347 (715)
T ss_dssp SEEEECCHHHHHHHHHHHHHT-TCCEEEECSSH
T ss_pred EEEEECCChhhHHHHHHHHhC-CCEEEEEECCH
Confidence 399999999999999999999 99999999863
No 439
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=68.79 E-value=4.2 Score=43.24 Aligned_cols=34 Identities=15% Similarity=0.205 Sum_probs=29.8
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.-.|+|||+|.+|+.+|..|... |.+|++.++.+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRL-GAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 34699999999999999988887 99999999764
No 440
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=68.77 E-value=4.2 Score=39.61 Aligned_cols=30 Identities=20% Similarity=0.174 Sum_probs=27.6
Q ss_pred EEEECC-ChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 120 FIIIGA-GSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 120 vIIVGs-G~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
++|.|+ |..|..+|.+|+++ |.+|+++.+.
T Consensus 10 vlVTGasggiG~~~a~~l~~~-G~~V~~~~r~ 40 (244)
T 1cyd_A 10 ALVTGAGKGIGRDTVKALHAS-GAKVVAVTRT 40 (244)
T ss_dssp EEEESTTSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred EEEeCCCchHHHHHHHHHHHC-CCEEEEEeCC
Confidence 888887 89999999999999 9999999875
No 441
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=68.65 E-value=4.5 Score=40.92 Aligned_cols=31 Identities=23% Similarity=0.287 Sum_probs=28.5
Q ss_pred EEEECC-ChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 120 FIIIGA-GSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 120 vIIVGs-G~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
|+|.|| |+.|..++.+|.++ |++|.+|-|.+
T Consensus 3 ILVTGatGfIG~~L~~~L~~~-G~~V~~l~R~~ 34 (298)
T 4b4o_A 3 VLVGGGTGFIGTALTQLLNAR-GHEVTLVSRKP 34 (298)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TCEEEEEESSC
T ss_pred EEEECCCCHHHHHHHHHHHHC-CCEEEEEECCC
Confidence 789998 99999999999999 99999998754
No 442
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=68.60 E-value=3.9 Score=42.44 Aligned_cols=31 Identities=23% Similarity=0.376 Sum_probs=28.3
Q ss_pred cEEEECCChhHHHHHHHHhhcCCC--eEEEEecC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKW--KVLLLEAG 150 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~--~VlVLEaG 150 (731)
-|.|||+|..|.++|..|+.. |+ .|+++|.-
T Consensus 7 kI~ViGaG~vG~~~a~~l~~~-~~~~~l~l~D~~ 39 (326)
T 3pqe_A 7 KVALIGAGFVGSSYAFALINQ-GITDELVVIDVN 39 (326)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCceEEEEecc
Confidence 489999999999999999998 87 89999974
No 443
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=68.51 E-value=4.1 Score=40.56 Aligned_cols=32 Identities=19% Similarity=0.383 Sum_probs=29.4
Q ss_pred cEEEECCChhHHHHHHHHhhcCCC-eEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~-~VlVLEaG~ 151 (731)
-++|||+|.+|..+|..|++. |. +|.|..|-.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~-G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQM-GVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHc-CCCEEEEEeCCH
Confidence 699999999999999999998 88 899998863
No 444
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=68.49 E-value=8.7 Score=40.45 Aligned_cols=57 Identities=14% Similarity=0.038 Sum_probs=39.2
Q ss_pred cHhhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEeCCEEEEEEeccEEEecccCCCch
Q psy7389 313 IRPIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSP 378 (731)
Q Consensus 313 L~~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~~g~~~~i~A~k~VVLAAGai~Tp 378 (731)
|...+. +.|++|+.++.|++|..++++. + .|.+..+|...+++|+ .||.|.|.....
T Consensus 109 L~~~~~-~~g~~i~~~~~v~~i~~~~~~~------~-~v~~~~~g~~~~~~a~-~vV~AdG~~S~v 165 (394)
T 1k0i_A 109 LMEARE-ACGATTVYQAAEVRLHDLQGER------P-YVTFERDGERLRLDCD-YIAGCDGFHGIS 165 (394)
T ss_dssp HHHHHH-HTTCEEESSCEEEEEECTTSSS------C-EEEEEETTEEEEEECS-EEEECCCTTCST
T ss_pred HHHHHH-hcCCeEEeceeEEEEEEecCCc------e-EEEEecCCcEEEEEeC-EEEECCCCCcHH
Confidence 444444 4699999999999998753221 2 4555456766679998 699999975443
No 445
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=68.39 E-value=4.1 Score=42.14 Aligned_cols=32 Identities=16% Similarity=0.199 Sum_probs=29.5
Q ss_pred cEEEECC-ChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGA-GSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGs-G~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-|+|.|+ |+.|..+|.+|+++ |++|+++.+..
T Consensus 21 ~vlVtGatG~iG~~l~~~L~~~-G~~V~~~~r~~ 53 (347)
T 4id9_A 21 MILVTGSAGRVGRAVVAALRTQ-GRTVRGFDLRP 53 (347)
T ss_dssp CEEEETTTSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred EEEEECCCChHHHHHHHHHHhC-CCEEEEEeCCC
Confidence 3999998 99999999999999 99999999874
No 446
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=68.36 E-value=4 Score=44.88 Aligned_cols=32 Identities=19% Similarity=0.297 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.+.|||.|..|...|..|+++ |++|.+.++.+
T Consensus 4 ~IgvIG~G~mG~~lA~~La~~-G~~V~v~dr~~ 35 (482)
T 2pgd_A 4 DIALIGLAVMGQNLILNMNDH-GFVVCAFNRTV 35 (482)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEECSST
T ss_pred eEEEEChHHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 589999999999999999998 99999999863
No 447
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=68.33 E-value=4.4 Score=41.12 Aligned_cols=31 Identities=23% Similarity=0.528 Sum_probs=28.7
Q ss_pred EEEECC-ChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 120 FIIIGA-GSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 120 vIIVGs-G~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
|+|.|+ |+.|..++.+|+++ |++|+++.+..
T Consensus 3 vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~ 34 (312)
T 3ko8_A 3 IVVTGGAGFIGSHLVDKLVEL-GYEVVVVDNLS 34 (312)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TCEEEEECCCS
T ss_pred EEEECCCChHHHHHHHHHHhC-CCEEEEEeCCC
Confidence 789998 99999999999999 99999998864
No 448
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=68.27 E-value=4.6 Score=40.45 Aligned_cols=31 Identities=13% Similarity=-0.005 Sum_probs=28.0
Q ss_pred EEEECC---ChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 120 FIIIGA---GSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 120 vIIVGs---G~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
++|.|+ |..|..+|.+|+++ |.+|+++.|..
T Consensus 9 vlVTGas~~~gIG~~~a~~l~~~-G~~V~~~~r~~ 42 (275)
T 2pd4_A 9 GLIVGVANNKSIAYGIAQSCFNQ-GATLAFTYLNE 42 (275)
T ss_dssp EEEECCCSTTSHHHHHHHHHHTT-TCEEEEEESST
T ss_pred EEEECCCCCCcHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 889997 68999999999999 99999998864
No 449
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=68.27 E-value=3.8 Score=42.87 Aligned_cols=34 Identities=15% Similarity=0.214 Sum_probs=30.3
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCC-eEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~-~VlVLEaG~ 151 (731)
..-|+|||.|..|+.+|..|+.. |. ++.|+|-..
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~-Gvg~itlvD~d~ 70 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILA-GVKGLTMLDHEQ 70 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CCCEEEEEECCC
Confidence 46799999999999999999999 87 899998653
No 450
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=68.18 E-value=4.4 Score=41.40 Aligned_cols=33 Identities=15% Similarity=0.258 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
--+.|||.|..|..+|..|... |.+|++.++..
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~d~~~ 190 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAAL-GANVKVGARSS 190 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSH
T ss_pred CEEEEEcccHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 3599999999999999999988 99999999753
No 451
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=68.12 E-value=4 Score=44.52 Aligned_cols=31 Identities=23% Similarity=0.235 Sum_probs=28.9
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
-|+|||+|-.|...|..|.+. |.+|.|++..
T Consensus 14 ~vlVvGgG~va~~k~~~L~~~-ga~V~vi~~~ 44 (457)
T 1pjq_A 14 DCLIVGGGDVAERKARLLLEA-GARLTVNALT 44 (457)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TBEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHhC-cCEEEEEcCC
Confidence 389999999999999999999 9999999964
No 452
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=68.01 E-value=4.1 Score=43.97 Aligned_cols=31 Identities=19% Similarity=0.258 Sum_probs=28.3
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.+.|||.|..|+..|..||+ |++|+++++.+
T Consensus 38 kIaVIGlG~mG~~lA~~La~--G~~V~~~D~~~ 68 (432)
T 3pid_A 38 KITISGTGYVGLSNGVLIAQ--NHEVVALDIVQ 68 (432)
T ss_dssp EEEEECCSHHHHHHHHHHHT--TSEEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHc--CCeEEEEecCH
Confidence 59999999999999999996 89999999864
No 453
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=68.00 E-value=3.8 Score=40.81 Aligned_cols=31 Identities=26% Similarity=0.405 Sum_probs=28.6
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCe-EEEEecC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWK-VLLLEAG 150 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~-VlVLEaG 150 (731)
-+.|||.|..|...|..|++. |++ |.+.++.
T Consensus 12 ~i~iiG~G~mG~~~a~~l~~~-g~~~v~~~~~~ 43 (266)
T 3d1l_A 12 PIVLIGAGNLATNLAKALYRK-GFRIVQVYSRT 43 (266)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-TCCEEEEECSS
T ss_pred eEEEEcCCHHHHHHHHHHHHC-CCeEEEEEeCC
Confidence 499999999999999999998 998 8899875
No 454
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=67.96 E-value=4 Score=42.66 Aligned_cols=32 Identities=22% Similarity=0.241 Sum_probs=29.4
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-+.|||.|..|.+.|..|.++ |.+|++.++.+
T Consensus 10 kIgIIG~G~mG~slA~~L~~~-G~~V~~~dr~~ 41 (341)
T 3ktd_A 10 PVCILGLGLIGGSLLRDLHAA-NHSVFGYNRSR 41 (341)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred EEEEEeecHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 389999999999999999998 99999999763
No 455
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=67.96 E-value=4.5 Score=40.77 Aligned_cols=33 Identities=12% Similarity=0.126 Sum_probs=29.0
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCC-eEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~-~VlVLEaG~ 151 (731)
--++|+|+|.+|..+|..|++. |. +|.|+.|-.
T Consensus 121 k~~lvlGaGg~~~aia~~L~~~-G~~~v~i~~R~~ 154 (272)
T 3pwz_A 121 RRVLLLGAGGAVRGALLPFLQA-GPSELVIANRDM 154 (272)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-CCSEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHHc-CCCEEEEEeCCH
Confidence 3599999999999999999998 95 999998753
No 456
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=67.93 E-value=4.7 Score=39.19 Aligned_cols=31 Identities=32% Similarity=0.463 Sum_probs=28.5
Q ss_pred EEEEC-CChhHHHHHHHHhhcCCC--eEEEEecCC
Q psy7389 120 FIIIG-AGSAGCVLANRLSEIKKW--KVLLLEAGI 151 (731)
Q Consensus 120 vIIVG-sG~aG~~aA~~LA~~~G~--~VlVLEaG~ 151 (731)
++|.| +|..|..+|.+|+++ |. +|+++.|.+
T Consensus 21 vlVtGasg~iG~~l~~~L~~~-G~~~~V~~~~r~~ 54 (242)
T 2bka_A 21 VFILGASGETGRVLLKEILEQ-GLFSKVTLIGRRK 54 (242)
T ss_dssp EEEECTTSHHHHHHHHHHHHH-TCCSEEEEEESSC
T ss_pred EEEECCCcHHHHHHHHHHHcC-CCCCEEEEEEcCC
Confidence 89999 599999999999999 99 999999865
No 457
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=67.89 E-value=3 Score=42.67 Aligned_cols=31 Identities=16% Similarity=0.228 Sum_probs=28.0
Q ss_pred cEEEECCChhHHHHHHHHhhcC----C-CeEEEEec
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIK----K-WKVLLLEA 149 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~----G-~~VlVLEa 149 (731)
.+.|||+|..|...|..|++++ | .+|.++++
T Consensus 10 ~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 10 KIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 5999999999999999999862 7 89999987
No 458
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=67.86 E-value=4.3 Score=44.26 Aligned_cols=49 Identities=12% Similarity=0.047 Sum_probs=35.6
Q ss_pred CCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEe---------------CCEEEEEEeccEEEecccCCCch
Q psy7389 321 KNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFY---------------KKKLRRARAKKEVISSAGAINSP 378 (731)
Q Consensus 321 ~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~---------------~g~~~~i~A~k~VVLAAGai~Tp 378 (731)
.|++|++++.+.+|.-+ + ++.+|++.+ +|...++.++ .||+|+|.-.++
T Consensus 265 ~gv~i~~~~~~~~i~~~---~-----~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d-~vi~a~G~~p~~ 328 (456)
T 1lqt_A 265 RRMVFRFLTSPIEIKGK---R-----KVERIVLGRNELVSDGSGRVAAKDTGEREELPAQ-LVVRSVGYRGVP 328 (456)
T ss_dssp EEEEEECSEEEEEEECS---S-----SCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECS-EEEECSCEECCC
T ss_pred ceEEEEeCCCCeEEecC---C-----cEeEEEEEEEEecCCCcccccccCCCceEEEEcC-EEEEccccccCC
Confidence 68999999999999744 2 345565542 3444679998 799999966555
No 459
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=67.86 E-value=4.4 Score=41.07 Aligned_cols=33 Identities=12% Similarity=0.181 Sum_probs=29.4
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCC-eEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~-~VlVLEaG~ 151 (731)
-.++|+|+|.+|..+|..|++. |. +|.|+.|-.
T Consensus 123 k~vlvlGaGGaaraia~~L~~~-G~~~v~v~nRt~ 156 (282)
T 3fbt_A 123 NICVVLGSGGAARAVLQYLKDN-FAKDIYVVTRNP 156 (282)
T ss_dssp SEEEEECSSTTHHHHHHHHHHT-TCSEEEEEESCH
T ss_pred CEEEEECCcHHHHHHHHHHHHc-CCCEEEEEeCCH
Confidence 4599999999999999999998 97 899998753
No 460
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=67.78 E-value=4.5 Score=41.62 Aligned_cols=31 Identities=29% Similarity=0.344 Sum_probs=28.7
Q ss_pred EEEECC-ChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 120 FIIIGA-GSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 120 vIIVGs-G~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
|+|.|+ |+.|..+|.+|+++ |++|+++.|..
T Consensus 6 vlVtGatG~iG~~l~~~L~~~-G~~V~~~~r~~ 37 (345)
T 2z1m_A 6 ALITGIRGQDGAYLAKLLLEK-GYEVYGADRRS 37 (345)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TCEEEEECSCC
T ss_pred EEEECCCChHHHHHHHHHHHC-CCEEEEEECCC
Confidence 899997 99999999999999 99999998864
No 461
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=67.78 E-value=3.5 Score=41.69 Aligned_cols=33 Identities=27% Similarity=0.350 Sum_probs=29.6
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCC-eEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~-~VlVLEaG~ 151 (731)
--++|||+|.+|..+|..|++. |. +|.|+.|..
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~-G~~~v~v~~R~~ 151 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKI-VRPTLTVANRTM 151 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT-CCSCCEEECSCG
T ss_pred CEEEEECCcHHHHHHHHHHHHC-CCCEEEEEeCCH
Confidence 3599999999999999999998 98 899998764
No 462
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=67.62 E-value=4.1 Score=44.32 Aligned_cols=30 Identities=17% Similarity=0.192 Sum_probs=28.1
Q ss_pred EEEECCChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 120 FIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 120 vIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
|+|+|+|..|..+|..|++. |.+|.++.|.
T Consensus 6 VlViGaG~iG~~ia~~L~~~-G~~V~v~~R~ 35 (450)
T 1ff9_A 6 VLMLGSGFVTRPTLDVLTDS-GIKVTVACRT 35 (450)
T ss_dssp EEEECCSTTHHHHHHHHHTT-TCEEEEEESS
T ss_pred EEEECCCHHHHHHHHHHHhC-cCEEEEEECC
Confidence 89999999999999999998 9999999875
No 463
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=67.62 E-value=4.2 Score=41.49 Aligned_cols=31 Identities=19% Similarity=0.141 Sum_probs=28.4
Q ss_pred EEEECCChhHHHHHHHHhhcCCC--eEEEEecCC
Q psy7389 120 FIIIGAGSAGCVLANRLSEIKKW--KVLLLEAGI 151 (731)
Q Consensus 120 vIIVGsG~aG~~aA~~LA~~~G~--~VlVLEaG~ 151 (731)
+.|||+|..|.++|..|+.. |. +|.++|+-+
T Consensus 3 I~ViGaG~vG~~la~~l~~~-~~~~~v~L~D~~~ 35 (294)
T 1oju_A 3 LGFVGAGRVGSTSAFTCLLN-LDVDEIALVDIAE 35 (294)
T ss_dssp EEEECCSHHHHHHHHHHHHH-SCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhC-CCCCeEEEEECCh
Confidence 78999999999999999998 88 899999754
No 464
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=67.49 E-value=4.4 Score=44.67 Aligned_cols=34 Identities=21% Similarity=0.207 Sum_probs=31.1
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
...+.|||.|..|...|..|+++ |++|.+.++.+
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~-G~~V~v~dr~~ 43 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADH-GFTVCAYNRTQ 43 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 46799999999999999999999 99999999864
No 465
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=67.49 E-value=4.6 Score=37.31 Aligned_cols=59 Identities=15% Similarity=0.106 Sum_probs=39.2
Q ss_pred hccHhhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEeCCEEEEEEeccEEEecccCCCchHHHhhcCC
Q psy7389 311 AFIRPIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGI 386 (731)
Q Consensus 311 ~~L~~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~~g~~~~i~A~k~VVLAAGai~Tp~LLl~SGi 386 (731)
.++...++ +.|++++.+ .|++|..++ + .. .|.. .++ ++.++ .||+|+|.. |.++...|+
T Consensus 60 ~~l~~~~~-~~gv~v~~~-~v~~i~~~~--~-----~~-~v~~-~~g---~i~ad-~vI~A~G~~--~~~~~~~g~ 118 (180)
T 2ywl_A 60 RRLEAHAR-RYGAEVRPG-VVKGVRDMG--G-----VF-EVET-EEG---VEKAE-RLLLCTHKD--PTLPSLLGL 118 (180)
T ss_dssp HHHHHHHH-HTTCEEEEC-CCCEEEECS--S-----SE-EEEC-SSC---EEEEE-EEEECCTTC--CHHHHHHTC
T ss_pred HHHHHHHH-HcCCEEEeC-EEEEEEEcC--C-----EE-EEEE-CCC---EEEEC-EEEECCCCC--CCccccCCC
Confidence 34555555 578999999 999998753 2 11 2322 233 68998 699999965 456666665
No 466
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=67.30 E-value=4.2 Score=41.68 Aligned_cols=33 Identities=18% Similarity=0.318 Sum_probs=29.2
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCC--eEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKW--KVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~--~VlVLEaG~ 151 (731)
.-|.|||+|..|...|..|+.+ |+ .|+++|.-.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~-g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK-GIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhc-CCCCEEEEEcCCc
Confidence 3499999999999999999998 88 999999864
No 467
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=67.25 E-value=4.8 Score=40.74 Aligned_cols=33 Identities=18% Similarity=0.244 Sum_probs=29.1
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCC-eEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~-~VlVLEaG~ 151 (731)
--++|+|+|.+|..+|..|++. |. +|.|+.|..
T Consensus 127 k~vlvlGaGg~g~aia~~L~~~-G~~~v~v~~R~~ 160 (281)
T 3o8q_A 127 ATILLIGAGGAARGVLKPLLDQ-QPASITVTNRTF 160 (281)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-CCSEEEEEESSH
T ss_pred CEEEEECchHHHHHHHHHHHhc-CCCeEEEEECCH
Confidence 3599999999999999999998 95 999998753
No 468
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=67.16 E-value=4.4 Score=41.26 Aligned_cols=31 Identities=16% Similarity=0.330 Sum_probs=26.8
Q ss_pred EEEECC-ChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 120 FIIIGA-GSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 120 vIIVGs-G~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
|+|.|+ |+.|..++.+|+++ |++|+++.|..
T Consensus 5 vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~ 36 (315)
T 2ydy_A 5 VLVTGATGLLGRAVHKEFQQN-NWHAVGCGFRR 36 (315)
T ss_dssp EEEETTTSHHHHHHHHHHHTT-TCEEEEEC---
T ss_pred EEEECCCcHHHHHHHHHHHhC-CCeEEEEccCC
Confidence 899997 99999999999998 99999998753
No 469
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=67.05 E-value=4.6 Score=41.81 Aligned_cols=32 Identities=25% Similarity=0.374 Sum_probs=29.4
Q ss_pred cEEEECCChhHHHHHHHHhhcCCC-eEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~-~VlVLEaG~ 151 (731)
-+.|||+|..|.++|..|+.. |+ .|.++|.-.
T Consensus 9 kI~viGaG~vG~~~a~~l~~~-~~~~v~L~Di~~ 41 (324)
T 3gvi_A 9 KIALIGSGMIGGTLAHLAGLK-ELGDVVLFDIAE 41 (324)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCeEEEEeCCc
Confidence 499999999999999999998 88 999999864
No 470
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=67.03 E-value=4.8 Score=39.24 Aligned_cols=30 Identities=17% Similarity=0.206 Sum_probs=27.4
Q ss_pred EEEECC-ChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 120 FIIIGA-GSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 120 vIIVGs-G~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
++|.|+ |..|..+|.+|+++ |.+|+++.+.
T Consensus 10 vlITGasggiG~~~a~~l~~~-G~~V~~~~r~ 40 (244)
T 3d3w_A 10 VLVTGAGKGIGRGTVQALHAT-GARVVAVSRT 40 (244)
T ss_dssp EEEESTTSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred EEEECCCcHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 788887 89999999999999 9999999875
No 471
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=66.94 E-value=5 Score=38.93 Aligned_cols=31 Identities=19% Similarity=0.306 Sum_probs=27.7
Q ss_pred EEEECC-ChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 120 FIIIGA-GSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 120 vIIVGs-G~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
++|.|+ |..|..+|.+|+++ |.+|+++.+..
T Consensus 5 vlVtGasggiG~~la~~l~~~-G~~V~~~~r~~ 36 (242)
T 1uay_A 5 ALVTGGASGLGRAAALALKAR-GYRVVVLDLRR 36 (242)
T ss_dssp EEEETTTSHHHHHHHHHHHHH-TCEEEEEESSC
T ss_pred EEEeCCCChHHHHHHHHHHHC-CCEEEEEccCc
Confidence 788875 88899999999999 99999999864
No 472
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=66.85 E-value=5.1 Score=39.76 Aligned_cols=30 Identities=20% Similarity=0.377 Sum_probs=26.6
Q ss_pred EEEECC-Ch--hHHHHHHHHhhcCCCeEEEEecC
Q psy7389 120 FIIIGA-GS--AGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 120 vIIVGs-G~--aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
++|.|+ |. .|..+|.+|+++ |.+|+++.+.
T Consensus 10 vlVTGasg~~GIG~~ia~~l~~~-G~~V~~~~r~ 42 (266)
T 3oig_A 10 IVVMGVANKRSIAWGIARSLHEA-GARLIFTYAG 42 (266)
T ss_dssp EEEECCCSTTSHHHHHHHHHHHT-TCEEEEEESS
T ss_pred EEEEcCCCCCcHHHHHHHHHHHC-CCEEEEecCc
Confidence 888887 55 899999999999 9999999875
No 473
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=66.81 E-value=4.9 Score=41.37 Aligned_cols=32 Identities=16% Similarity=0.304 Sum_probs=28.9
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCC-eEEEEecC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAG 150 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~-~VlVLEaG 150 (731)
--++|+|+|.+|..+|..|++. |. +|.|+-|.
T Consensus 149 k~~lVlGAGGaaraia~~L~~~-G~~~v~v~nRt 181 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAIE-GIKEIKLFNRK 181 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCSEEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHc-CCCEEEEEECC
Confidence 3599999999999999999998 97 89999886
No 474
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=66.65 E-value=4.4 Score=42.02 Aligned_cols=31 Identities=16% Similarity=0.223 Sum_probs=28.4
Q ss_pred cEEEECCChhHHHHHHHHhhcCCC--eEEEEecC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKW--KVLLLEAG 150 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~--~VlVLEaG 150 (731)
-|.|||+|..|..+|..|+.. |+ .|+++|..
T Consensus 23 kV~ViGaG~vG~~~a~~la~~-g~~~ev~L~Di~ 55 (330)
T 3ldh_A 23 KITVVGCDAVGMADAISVLMK-DLADEVALVDVM 55 (330)
T ss_dssp EEEEESTTHHHHHHHHHHHHH-CCCSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCeEEEEECC
Confidence 499999999999999999998 87 89999974
No 475
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=66.49 E-value=4.6 Score=40.10 Aligned_cols=30 Identities=27% Similarity=0.350 Sum_probs=27.5
Q ss_pred EEEECC---ChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 120 FIIIGA---GSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 120 vIIVGs---G~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
++|.|+ |..|..+|.+|+++ |.+|+++.+.
T Consensus 11 vlVTGas~~~gIG~~ia~~l~~~-G~~V~~~~r~ 43 (261)
T 2wyu_A 11 ALVMGVTNQRSLGFAIAAKLKEA-GAEVALSYQA 43 (261)
T ss_dssp EEEESCCSSSSHHHHHHHHHHHH-TCEEEEEESC
T ss_pred EEEECCCCCCcHHHHHHHHHHHC-CCEEEEEcCC
Confidence 899997 68999999999999 9999999875
No 476
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=66.30 E-value=5.5 Score=39.25 Aligned_cols=31 Identities=13% Similarity=0.469 Sum_probs=27.9
Q ss_pred EEEECC-ChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 120 FIIIGA-GSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 120 vIIVGs-G~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
++|.|+ |..|..+|.+|+++ |.+|+++.|..
T Consensus 25 vlITGas~gIG~~la~~l~~~-G~~V~~~~r~~ 56 (251)
T 3orf_A 25 ILVLGGSGALGAEVVKFFKSK-SWNTISIDFRE 56 (251)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TCEEEEEESSC
T ss_pred EEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCc
Confidence 788886 78899999999999 99999999864
No 477
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=66.23 E-value=4.8 Score=41.58 Aligned_cols=33 Identities=24% Similarity=0.261 Sum_probs=29.4
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCC--eEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKW--KVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~--~VlVLEaG~ 151 (731)
.-|+|||+|..|.++|..|+.. |. .|+++|.-.
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~-~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALR-QTANELVLIDVFK 42 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCSSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCCh
Confidence 4699999999999999999998 87 899999754
No 478
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=66.11 E-value=4.5 Score=40.37 Aligned_cols=31 Identities=16% Similarity=0.140 Sum_probs=27.8
Q ss_pred EEEEC---CChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 120 FIIIG---AGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 120 vIIVG---sG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
++|.| +|..|..+|.+|+++ |.+|+++.+..
T Consensus 10 vlVTGa~~s~gIG~aia~~l~~~-G~~V~~~~r~~ 43 (269)
T 2h7i_A 10 ILVSGIITDSSIAFHIARVAQEQ-GAQLVLTGFDR 43 (269)
T ss_dssp EEECCCSSTTSHHHHHHHHHHHT-TCEEEEEECSC
T ss_pred EEEECCCCCCchHHHHHHHHHHC-CCEEEEEecCh
Confidence 88999 588999999999999 99999998753
No 479
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=65.94 E-value=5 Score=40.79 Aligned_cols=30 Identities=23% Similarity=0.153 Sum_probs=27.3
Q ss_pred EEEECCC---hhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 120 FIIIGAG---SAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 120 vIIVGsG---~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
++|.|++ ..|..+|.+|+++ |.+|+++.+.
T Consensus 33 vlVTGasg~~GIG~~ia~~la~~-G~~V~~~~r~ 65 (296)
T 3k31_A 33 GVIIGVANDKSLAWGIAKAVCAQ-GAEVALTYLS 65 (296)
T ss_dssp EEEECCCSTTSHHHHHHHHHHHT-TCEEEEEESS
T ss_pred EEEEeCCCCCCHHHHHHHHHHHC-CCEEEEEeCC
Confidence 8888985 8899999999999 9999999876
No 480
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=65.90 E-value=4.4 Score=43.78 Aligned_cols=34 Identities=26% Similarity=0.578 Sum_probs=30.2
Q ss_pred cccEEEECCChhHHHHHHHHhhcCCC-eEEEEecCC
Q psy7389 117 TFDFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (731)
Q Consensus 117 ~~DvIIVGsG~aG~~aA~~LA~~~G~-~VlVLEaG~ 151 (731)
..-|+|||+|..|+.+|..||.. |. ++.|+|...
T Consensus 40 ~~~VlvvG~GGlGs~va~~La~a-Gvg~i~ivD~D~ 74 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLALS-GFRQIHVIDMDT 74 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHHT-TCCCEEEEECCB
T ss_pred CCEEEEECcCHHHHHHHHHHHHc-CCCEEEEEcCCE
Confidence 46799999999999999999998 87 799999653
No 481
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=65.87 E-value=3.2 Score=44.89 Aligned_cols=56 Identities=16% Similarity=0.130 Sum_probs=40.2
Q ss_pred ChhhhccHhhHhcCCCeEEEcCcEEEEEEecCCCCCCCceEEEEEEEEeCCEEEEEEeccEEEecccCC
Q psy7389 307 STNGAFIRPIRKKRKNLTILTEAHVTRIIFDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAI 375 (731)
Q Consensus 307 s~~~~~L~~a~~~~~g~~i~~~t~V~~I~~~~~g~~~~~~r~~GV~~~~~g~~~~i~A~k~VVLAAGai 375 (731)
......|.+.++ ..|++|++++.|++|..++ + ++++|.. +++ +++|+ .||+|+|..
T Consensus 234 ~~l~~~l~~~~~-~~G~~i~~~~~V~~I~~~~--~-----~v~~v~~--~g~--~~~ad-~VV~a~~~~ 289 (433)
T 1d5t_A 234 GELPQGFARLSA-IYGGTYMLNKPVDDIIMEN--G-----KVVGVKS--EGE--VARCK-QLICDPSYV 289 (433)
T ss_dssp THHHHHHHHHHH-HHTCCCBCSCCCCEEEEET--T-----EEEEEEE--TTE--EEECS-EEEECGGGC
T ss_pred HHHHHHHHHHHH-HcCCEEECCCEEEEEEEeC--C-----EEEEEEE--CCe--EEECC-EEEECCCCC
Confidence 333334554444 5689999999999999863 4 7777762 443 68898 599999975
No 482
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=65.82 E-value=5.2 Score=41.38 Aligned_cols=32 Identities=28% Similarity=0.233 Sum_probs=28.0
Q ss_pred cEEEECCChhHHH-HHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCV-LANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~-aA~~LA~~~G~~VlVLEaG~ 151 (731)
-|.|||.|.+|++ +|..|.+. |++|.+.|+..
T Consensus 6 ~i~~iGiGg~Gms~~A~~L~~~-G~~V~~~D~~~ 38 (326)
T 3eag_A 6 HIHIIGIGGTFMGGLAAIAKEA-GFEVSGCDAKM 38 (326)
T ss_dssp EEEEESCCSHHHHHHHHHHHHT-TCEEEEEESSC
T ss_pred EEEEEEECHHHHHHHHHHHHhC-CCEEEEEcCCC
Confidence 3899999999996 77778888 99999999874
No 483
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=65.66 E-value=4.9 Score=45.07 Aligned_cols=33 Identities=27% Similarity=0.370 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
-.+||||.|-.|..+|..|.+. |.+|+|+|+.+
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~-g~~v~vid~d~ 381 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRK-PVPFILIDRQE 381 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHC-CCCEEEEECCh
Confidence 4599999999999999999998 99999999875
No 484
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=65.46 E-value=4.9 Score=40.09 Aligned_cols=32 Identities=28% Similarity=0.371 Sum_probs=29.4
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
.+.|||+|..|..+|..|++. |.+|.|.++..
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~-g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREA-GLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 699999999999999999998 88999998763
No 485
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=65.33 E-value=5.3 Score=43.66 Aligned_cols=33 Identities=18% Similarity=0.330 Sum_probs=29.3
Q ss_pred cEEEECCChhHHHHHHHHhhc-CCCeEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEI-KKWKVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~-~G~~VlVLEaG~ 151 (731)
-+.|||.|..|+..|..|+++ +|++|+++++.+
T Consensus 7 kI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 7 KICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp EEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 499999999999999999997 268999999753
No 486
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=65.26 E-value=5.2 Score=41.34 Aligned_cols=32 Identities=25% Similarity=0.391 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHHHHhhcCCC-eEEEEecCC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKW-KVLLLEAGI 151 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~-~VlVLEaG~ 151 (731)
-|.|||+|..|.++|..|+.. |+ .|.++|.-+
T Consensus 7 kI~iiGaG~vG~~~a~~l~~~-~~~~v~l~Di~~ 39 (321)
T 3p7m_A 7 KITLVGAGNIGGTLAHLALIK-QLGDVVLFDIAQ 39 (321)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCceEEEEeCCh
Confidence 489999999999999999998 87 999999864
No 487
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=65.13 E-value=4.8 Score=41.93 Aligned_cols=31 Identities=29% Similarity=0.254 Sum_probs=28.5
Q ss_pred cEEEECCChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
-+.|||.|..|.+.|..|++. |.+|++.++.
T Consensus 18 ~I~IIG~G~mG~alA~~L~~~-G~~V~~~~~~ 48 (338)
T 1np3_A 18 KVAIIGYGSQGHAHACNLKDS-GVDVTVGLRS 48 (338)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECCT
T ss_pred EEEEECchHHHHHHHHHHHHC-cCEEEEEECC
Confidence 399999999999999999998 9999998875
No 488
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=65.11 E-value=5.2 Score=38.75 Aligned_cols=31 Identities=23% Similarity=0.197 Sum_probs=27.2
Q ss_pred EEEECC-ChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 120 FIIIGA-GSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 120 vIIVGs-G~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
++|.|+ |..|..+|.+|+++ |.+|+++.|..
T Consensus 4 vlVTGas~gIG~~~a~~l~~~-G~~V~~~~r~~ 35 (230)
T 3guy_A 4 IVITGASSGLGAELAKLYDAE-GKATYLTGRSE 35 (230)
T ss_dssp EEEESTTSHHHHHHHHHHHHT-TCCEEEEESCH
T ss_pred EEEecCCchHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 788886 67899999999999 99999998863
No 489
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=65.06 E-value=5.5 Score=39.19 Aligned_cols=30 Identities=20% Similarity=0.328 Sum_probs=27.0
Q ss_pred EEEECC-ChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 120 FIIIGA-GSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 120 vIIVGs-G~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
++|.|+ |..|..+|.+|+++ |.+|+++.+.
T Consensus 16 vlItGasggiG~~la~~l~~~-G~~V~~~~r~ 46 (260)
T 3awd_A 16 AIVTGGAQNIGLACVTALAEA-GARVIIADLD 46 (260)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred EEEeCCCchHHHHHHHHHHHC-CCEEEEEeCC
Confidence 788876 88999999999999 9999999875
No 490
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=65.02 E-value=5.3 Score=41.01 Aligned_cols=30 Identities=23% Similarity=0.290 Sum_probs=28.2
Q ss_pred EEEECC-ChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 120 FIIIGA-GSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 120 vIIVGs-G~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
|+|.|+ |+.|..++.+|+++ |++|+++.|.
T Consensus 14 vlVTGatG~iG~~l~~~L~~~-g~~V~~~~r~ 44 (342)
T 1y1p_A 14 VLVTGANGFVASHVVEQLLEH-GYKVRGTARS 44 (342)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred EEEECCccHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 899998 99999999999999 9999999875
No 491
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=64.96 E-value=5.2 Score=41.22 Aligned_cols=33 Identities=21% Similarity=0.157 Sum_probs=29.3
Q ss_pred cccEEEECCC-hhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 117 TFDFIIIGAG-SAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 117 ~~DvIIVGsG-~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
.-.++|||+| ..|..+|..|+.. |.+|.|++|.
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~~~-gAtVtv~nR~ 210 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLAND-GATVYSVDVN 210 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTT-SCEEEEECSS
T ss_pred CCEEEEECCCcchHHHHHHHHHHC-CCEEEEEeCc
Confidence 4579999999 5699999999998 9999999875
No 492
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=64.92 E-value=5.4 Score=41.43 Aligned_cols=32 Identities=16% Similarity=0.257 Sum_probs=28.7
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCC--eEEEEecC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKW--KVLLLEAG 150 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~--~VlVLEaG 150 (731)
--|.|||+|..|.++|..|+.+ |. .|+++|.-
T Consensus 20 ~kV~ViGaG~vG~~~a~~l~~~-~~~~el~L~Di~ 53 (331)
T 4aj2_A 20 NKITVVGVGAVGMACAISILMK-DLADELALVDVI 53 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCceEEEEeCC
Confidence 4599999999999999999998 87 89999964
No 493
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=64.84 E-value=5.2 Score=40.59 Aligned_cols=30 Identities=20% Similarity=0.319 Sum_probs=27.5
Q ss_pred EEEECC-ChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 120 FIIIGA-GSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 120 vIIVGs-G~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
++|.|+ |+.|..+|.+|+++ |++|+++.+.
T Consensus 3 vlVTGatG~iG~~l~~~L~~~-G~~V~~~~r~ 33 (311)
T 2p5y_A 3 VLVTGGAGFIGSHIVEDLLAR-GLEVAVLDNL 33 (311)
T ss_dssp EEEETTTSHHHHHHHHHHHTT-TCEEEEECCC
T ss_pred EEEEeCCcHHHHHHHHHHHHC-CCEEEEEECC
Confidence 788987 99999999999998 9999999874
No 494
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=64.72 E-value=4.6 Score=40.13 Aligned_cols=30 Identities=10% Similarity=0.087 Sum_probs=27.2
Q ss_pred EEEECC---ChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 120 FIIIGA---GSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 120 vIIVGs---G~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
++|.|+ |..|..+|.+|+++ |.+|+++.|.
T Consensus 12 vlVTGas~~~gIG~~ia~~l~~~-G~~V~~~~r~ 44 (265)
T 1qsg_A 12 ILVTGVASKLSIAYGIAQAMHRE-GAELAFTYQN 44 (265)
T ss_dssp EEECCCCSTTSHHHHHHHHHHHT-TCEEEEEESS
T ss_pred EEEECCCCCCCHHHHHHHHHHHC-CCEEEEEcCc
Confidence 788887 68999999999999 9999999875
No 495
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=64.62 E-value=5.2 Score=41.45 Aligned_cols=31 Identities=16% Similarity=0.282 Sum_probs=28.2
Q ss_pred cEEEECCChhHHHHHHHHhhcCCC--eEEEEecC
Q psy7389 119 DFIIIGAGSAGCVLANRLSEIKKW--KVLLLEAG 150 (731)
Q Consensus 119 DvIIVGsG~aG~~aA~~LA~~~G~--~VlVLEaG 150 (731)
-|.|||+|..|.++|..|+.. |. .|.++|.-
T Consensus 11 kV~ViGaG~vG~~~a~~l~~~-~~~~el~l~D~~ 43 (326)
T 3vku_A 11 KVILVGDGAVGSSYAYAMVLQ-GIAQEIGIVDIF 43 (326)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCeEEEEeCC
Confidence 389999999999999999998 77 89999974
No 496
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=64.61 E-value=4.4 Score=40.34 Aligned_cols=31 Identities=29% Similarity=0.267 Sum_probs=27.1
Q ss_pred EEEECC-ChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 120 FIIIGA-GSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 120 vIIVGs-G~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
++|.|+ |..|..+|.+|+++ |.+|+++.+..
T Consensus 30 vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~ 61 (260)
T 3gem_A 30 ILITGASQRVGLHCALRLLEH-GHRVIISYRTE 61 (260)
T ss_dssp EEESSTTSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred EEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCh
Confidence 777776 78899999999999 99999999863
No 497
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=64.43 E-value=5.7 Score=41.70 Aligned_cols=31 Identities=26% Similarity=0.241 Sum_probs=28.9
Q ss_pred EEEECC-ChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 120 FIIIGA-GSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 120 vIIVGs-G~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
|+|.|+ |+.|..++.+|+++ |++|+++.|..
T Consensus 31 vlVtGatG~IG~~l~~~L~~~-g~~V~~~~r~~ 62 (381)
T 1n7h_A 31 ALITGITGQDGSYLTEFLLGK-GYEVHGLIRRS 62 (381)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TCEEEEEECCC
T ss_pred EEEEcCCchHHHHHHHHHHHC-CCEEEEEecCC
Confidence 899997 99999999999998 99999999864
No 498
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=64.40 E-value=6.3 Score=38.45 Aligned_cols=31 Identities=16% Similarity=0.355 Sum_probs=27.5
Q ss_pred EEEECC-ChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 120 FIIIGA-GSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 120 vIIVGs-G~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
++|.|+ |..|..+|.+|+++ |.+|+++.|..
T Consensus 10 vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~ 41 (241)
T 1dhr_A 10 VLVYGGRGALGSRCVQAFRAR-NWWVASIDVVE 41 (241)
T ss_dssp EEEETTTSHHHHHHHHHHHTT-TCEEEEEESSC
T ss_pred EEEECCCcHHHHHHHHHHHhC-CCEEEEEeCCh
Confidence 788885 78899999999999 99999998864
No 499
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=64.38 E-value=5.9 Score=38.65 Aligned_cols=30 Identities=27% Similarity=0.331 Sum_probs=27.0
Q ss_pred EEEECC-ChhHHHHHHHHhhcCCCeEEEEecC
Q psy7389 120 FIIIGA-GSAGCVLANRLSEIKKWKVLLLEAG 150 (731)
Q Consensus 120 vIIVGs-G~aG~~aA~~LA~~~G~~VlVLEaG 150 (731)
++|.|+ |..|..+|.+|+++ |.+|+++.|.
T Consensus 6 vlVTGas~GIG~a~a~~l~~~-G~~V~~~~r~ 36 (235)
T 3l6e_A 6 IIVTGAGSGLGRALTIGLVER-GHQVSMMGRR 36 (235)
T ss_dssp EEEESTTSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred EEEECCCCHHHHHHHHHHHHC-CCEEEEEECC
Confidence 788886 78899999999999 9999999885
No 500
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=64.34 E-value=5 Score=44.00 Aligned_cols=33 Identities=18% Similarity=0.255 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHhhcCCCeEEEEecCC
Q psy7389 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGI 151 (731)
Q Consensus 118 ~DvIIVGsG~aG~~aA~~LA~~~G~~VlVLEaG~ 151 (731)
..+.|||.|..|...|..|+++ |++|.+.++.+
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~-G~~V~v~dr~~ 38 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESR-GYTVAIYNRTT 38 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSH
T ss_pred CcEEEEeeHHHHHHHHHHHHhC-CCEEEEEcCCH
Confidence 4699999999999999999998 99999998753
Done!