BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7395
(365 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1YFK|A Chain A, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YFK|B Chain B, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|A Chain A, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|B Chain B, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|C Chain C, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|D Chain D, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|E Chain E, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|F Chain F, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|G Chain G, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|H Chain H, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|I Chain I, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|J Chain J, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|K Chain K, Crystal Structure Of Human B Type Phosphoglycerate Mutase
pdb|1YJX|L Chain L, Crystal Structure Of Human B Type Phosphoglycerate Mutase
Length = 262
Score = 261 bits (667), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 136/246 (55%), Positives = 167/246 (67%), Gaps = 3/246 (1%)
Query: 5 CYTLVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSR 64
Y LV++RHGES W N F GWYD+ LS G +EA GQ LRD G++FD FTS R
Sbjct: 3 AYKLVLIRHGESAWNLENRFSGWYDADLSPAGHEEAKRGGQALRDAGYEFDICFTSVQKR 62
Query: 65 AQDTVQIILQELGQS-PEVTKSWRLNERHYGDLTGYNKLQMANKYGLEQVQIWRRSYDVL 123
A T+ +L + Q V ++WRLNERHYG LTG NK + A K+G QV+IWRRSYDV
Sbjct: 63 AIRTLWTVLDAIDQMWLPVVRTWRLNERHYGGLTGLNKAETAAKHGEAQVKIWRRSYDVP 122
Query: 124 PPPMTKDHKYYQDIITNPNFKIDGPNEDQFPHTESLKETIMRVLPYWNENIATEIKQGKK 183
PPPM DH +Y +I + + EDQ P ESLK+TI R LP+WNE I +IK+GK+
Sbjct: 123 PPPMEPDHPFYSNISKDRRYA--DLTEDQLPSCESLKDTIARALPFWNEEIVPQIKEGKR 180
Query: 184 VLVVTHGTSLRGLVKHIEQLSDAEIMKLNIPTAIPFVYKLDANLTPTKPRQFLCDEETVS 243
VL+ HG SLRG+VKH+E LS+ IM+LN+PT IP VY+LD NL P KP QFL DEETV
Sbjct: 181 VLIAAHGNSLRGIVKHLEGLSEEAIMELNLPTGIPIVYELDKNLKPIKPMQFLGDEETVR 240
Query: 244 KAMEKI 249
KAME +
Sbjct: 241 KAMEAV 246
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 100/197 (50%), Gaps = 18/197 (9%)
Query: 183 KVLVVTHGTSLRGLVKHIEQLSDAEI-------MKLNIPTAIPFVYKLDANLTPTKPRQF 235
K++++ HG S L DA++ K Y+ D T + R
Sbjct: 5 KLVLIRHGESAWNLENRFSGWYDADLSPAGHEEAKRGGQALRDAGYEFDICFTSVQKRAI 64
Query: 236 LCDEETVSKAMEKILKVHVGRPWGLQSHVF--LLGINN-----NFARFQVQIWRRSYDVL 288
TV A++++ + V R W L + L G+N QV+IWRRSYDV
Sbjct: 65 RT-LWTVLDAIDQMW-LPVVRTWRLNERHYGGLTGLNKAETAAKHGEAQVKIWRRSYDVP 122
Query: 289 PPPMTKDHKYYQDIITNPNFKIDGPNEDQFPHTESLKETIMRVLPYWNENIATEIKQGKK 348
PPPM DH +Y +I + + EDQ P ESLK+TI R LP+WNE I +IK+GK+
Sbjct: 123 PPPMEPDHPFYSNISKDRRYA--DLTEDQLPSCESLKDTIARALPFWNEEIVPQIKEGKR 180
Query: 349 VLVVTHGTSLRGLVKHI 365
VL+ HG SLRG+VKH+
Sbjct: 181 VLIAAHGNSLRGIVKHL 197
>pdb|4EMB|A Chain A, Crystal Structure Of A Phosphoglycerate Mutase Gpma From
Borrelia Burgdorferi B31
pdb|4EMB|B Chain B, Crystal Structure Of A Phosphoglycerate Mutase Gpma From
Borrelia Burgdorferi B31
pdb|4EMB|C Chain C, Crystal Structure Of A Phosphoglycerate Mutase Gpma From
Borrelia Burgdorferi B31
pdb|4EMB|D Chain D, Crystal Structure Of A Phosphoglycerate Mutase Gpma From
Borrelia Burgdorferi B31
Length = 274
Score = 256 bits (654), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/245 (53%), Positives = 167/245 (68%), Gaps = 6/245 (2%)
Query: 6 YTLVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRA 65
Y LV++RHGESEW K NLF GW D KLS+ GI EA AG +L+ EG+ FD F+S LSRA
Sbjct: 28 YKLVLVRHGESEWNKENLFTGWTDVKLSDKGIDEAVEAGLLLKQEGYSFDIAFSSLLSRA 87
Query: 66 QDTVQIILQELGQS-PEVTKSWRLNERHYGDLTGYNKLQMANKYGLEQVQIWRRSYDVLP 124
DT+ IIL+ELGQS V K+WRLNERHYG L G NK + A KYG ++V IWRRSYDV
Sbjct: 88 NDTLNIILRELGQSYISVKKTWRLNERHYGALQGLNKSETAAKYGEDKVLIWRRSYDV-- 145
Query: 125 PPMTKDHKYYQDIITNPNFKIDGPNEDQFPHTESLKETIMRVLPYWNENIATEIKQGKKV 184
PP + D + I +P +K E P TE LK+T+ RV+PYW + IA E+ +GKKV
Sbjct: 146 PPXSLDESDDRHPIKDPRYKHIPKRE--LPSTECLKDTVARVIPYWTDEIAKEVLEGKKV 203
Query: 185 LVVTHGTSLRGLVKHIEQLSDAEIMKLNIPTAIPFVYKLDANLTPTKPRQFLCDEETVSK 244
+V HG SLR LVK+ + LS+ +++KLNIPT IP VY+LD +L P K +L DE + K
Sbjct: 204 IVAAHGNSLRALVKYFDNLSEEDVLKLNIPTGIPLVYELDKDLNPIK-HYYLGDESKIKK 262
Query: 245 AMEKI 249
A E +
Sbjct: 263 AXESV 267
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 68/121 (56%), Gaps = 11/121 (9%)
Query: 252 VHVGRPWGLQSHVF--LLGINNN-----FARFQVQIWRRSYDVLPPPMTKDHKYYQDIIT 304
+ V + W L + L G+N + + +V IWRRSYDV PP + D + I
Sbjct: 103 ISVKKTWRLNERHYGALQGLNKSETAAKYGEDKVLIWRRSYDV--PPXSLDESDDRHPIK 160
Query: 305 NPNFKIDGPNEDQFPHTESLKETIMRVLPYWNENIATEIKQGKKVLVVTHGTSLRGLVKH 364
+P +K E P TE LK+T+ RV+PYW + IA E+ +GKKV+V HG SLR LVK+
Sbjct: 161 DPRYKHIPKRE--LPSTECLKDTVARVIPYWTDEIAKEVLEGKKVIVAAHGNSLRALVKY 218
Query: 365 I 365
Sbjct: 219 F 219
>pdb|1T8P|A Chain A, Crystal Structure Of Human Erythrocyte 2,3-
Bisphosphoglycerate Mutase
pdb|1T8P|B Chain B, Crystal Structure Of Human Erythrocyte 2,3-
Bisphosphoglycerate Mutase
pdb|2A9J|A Chain A, Human Bisphosphoglycerate Mutase Complexed With 3-
Phosphoglycerate (17 Days)
pdb|2A9J|B Chain B, Human Bisphosphoglycerate Mutase Complexed With 3-
Phosphoglycerate (17 Days)
pdb|2F90|A Chain A, Crystal Structure Of Bisphosphoglycerate Mutase In Complex
With 3-Phosphoglycerate And Alf4-
pdb|2F90|B Chain B, Crystal Structure Of Bisphosphoglycerate Mutase In Complex
With 3-Phosphoglycerate And Alf4-
pdb|2H4X|A Chain A, Human Bisphosphoglycerate Mutase Complex With 3-
Phosphoglycerate With Crystal Growth 90 Days
pdb|2H4X|B Chain B, Human Bisphosphoglycerate Mutase Complex With 3-
Phosphoglycerate With Crystal Growth 90 Days
pdb|2H4Z|A Chain A, Human Bisphosphoglycerate Mutase Complexed With 2,3-
Bisphosphoglycerate
pdb|2H4Z|B Chain B, Human Bisphosphoglycerate Mutase Complexed With 2,3-
Bisphosphoglycerate
pdb|2H52|A Chain A, Crystal Structure Of Human Bisphosphoglycerate Mutase
Complex With 3-Phosphoglycerate (18 Days)
pdb|2H52|B Chain B, Crystal Structure Of Human Bisphosphoglycerate Mutase
Complex With 3-Phosphoglycerate (18 Days)
pdb|3NFY|A Chain A, The Structure Of Human Bisphosphoglycerate Mutase To 1.94a
pdb|3NFY|B Chain B, The Structure Of Human Bisphosphoglycerate Mutase To 1.94a
Length = 267
Score = 256 bits (654), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 120/245 (48%), Positives = 165/245 (67%), Gaps = 1/245 (0%)
Query: 6 YTLVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRA 65
Y L+MLRHGE W K N FC W D KL+ G++EA G+ L+ F+FD VFTS L+R+
Sbjct: 4 YKLIMLRHGEGAWNKENRFCSWVDQKLNSEGMEEARNCGKQLKALNFEFDLVFTSVLNRS 63
Query: 66 QDTVQIILQELGQS-PEVTKSWRLNERHYGDLTGYNKLQMANKYGLEQVQIWRRSYDVLP 124
T +IL+ELGQ V SWRLNERHYG L G N+ QMA +G EQV++WRRSY+V P
Sbjct: 64 IHTAWLILEELGQEWVPVESSWRLNERHYGALIGLNREQMALNHGEEQVRLWRRSYNVTP 123
Query: 125 PPMTKDHKYYQDIITNPNFKIDGPNEDQFPHTESLKETIMRVLPYWNENIATEIKQGKKV 184
PP+ + H YYQ+I + +K+ DQ P +ESLK+ + R+LPYWNE IA E+ +GK +
Sbjct: 124 PPIEESHPYYQEIYNDRRYKVCDVPLDQLPRSESLKDVLERLLPYWNERIAPEVLRGKTI 183
Query: 185 LVVTHGTSLRGLVKHIEQLSDAEIMKLNIPTAIPFVYKLDANLTPTKPRQFLCDEETVSK 244
L+ HG S R L+KH+E +SD +I+ + +PT +P + +LD NL P QFL D+E +
Sbjct: 184 LISAHGNSSRALLKHLEGISDEDIINITLPTGVPILLELDENLRAVGPHQFLGDQEAIQA 243
Query: 245 AMEKI 249
A++K+
Sbjct: 244 AIKKV 248
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 74/121 (61%), Gaps = 7/121 (5%)
Query: 252 VHVGRPWGLQSHVF--LLGINN-----NFARFQVQIWRRSYDVLPPPMTKDHKYYQDIIT 304
V V W L + L+G+N N QV++WRRSY+V PPP+ + H YYQ+I
Sbjct: 79 VPVESSWRLNERHYGALIGLNREQMALNHGEEQVRLWRRSYNVTPPPIEESHPYYQEIYN 138
Query: 305 NPNFKIDGPNEDQFPHTESLKETIMRVLPYWNENIATEIKQGKKVLVVTHGTSLRGLVKH 364
+ +K+ DQ P +ESLK+ + R+LPYWNE IA E+ +GK +L+ HG S R L+KH
Sbjct: 139 DRRYKVCDVPLDQLPRSESLKDVLERLLPYWNERIAPEVLRGKTILISAHGNSSRALLKH 198
Query: 365 I 365
+
Sbjct: 199 L 199
>pdb|2HHJ|A Chain A, Human Bisphosphoglycerate Mutase Complexed With 2,3-
Bisphosphoglycerate (15 Days)
pdb|2HHJ|B Chain B, Human Bisphosphoglycerate Mutase Complexed With 2,3-
Bisphosphoglycerate (15 Days)
Length = 267
Score = 253 bits (645), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 119/245 (48%), Positives = 164/245 (66%), Gaps = 1/245 (0%)
Query: 6 YTLVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRA 65
Y L+MLR GE W K N FC W D KL+ G++EA G+ L+ F+FD VFTS L+R+
Sbjct: 4 YKLIMLRXGEGAWNKENRFCSWVDQKLNSEGMEEARNCGKQLKALNFEFDLVFTSVLNRS 63
Query: 66 QDTVQIILQELGQS-PEVTKSWRLNERHYGDLTGYNKLQMANKYGLEQVQIWRRSYDVLP 124
T +IL+ELGQ V SWRLNERHYG L G N+ QMA +G EQV++WRRSY+V P
Sbjct: 64 IHTAWLILEELGQEWVPVESSWRLNERHYGALIGLNREQMALNHGEEQVRLWRRSYNVTP 123
Query: 125 PPMTKDHKYYQDIITNPNFKIDGPNEDQFPHTESLKETIMRVLPYWNENIATEIKQGKKV 184
PP+ + H YYQ+I + +K+ DQ P +ESLK+ + R+LPYWNE IA E+ +GK +
Sbjct: 124 PPIEESHPYYQEIYNDRRYKVCDVPLDQLPRSESLKDVLERLLPYWNERIAPEVLRGKTI 183
Query: 185 LVVTHGTSLRGLVKHIEQLSDAEIMKLNIPTAIPFVYKLDANLTPTKPRQFLCDEETVSK 244
L+ HG S R L+KH+E +SD +I+ + +PT +P + +LD NL P QFL D+E +
Sbjct: 184 LISAHGNSSRALLKHLEGISDEDIINITLPTGVPILLELDENLRAVGPHQFLGDQEAIQA 243
Query: 245 AMEKI 249
A++K+
Sbjct: 244 AIKKV 248
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 74/121 (61%), Gaps = 7/121 (5%)
Query: 252 VHVGRPWGLQSHVF--LLGINN-----NFARFQVQIWRRSYDVLPPPMTKDHKYYQDIIT 304
V V W L + L+G+N N QV++WRRSY+V PPP+ + H YYQ+I
Sbjct: 79 VPVESSWRLNERHYGALIGLNREQMALNHGEEQVRLWRRSYNVTPPPIEESHPYYQEIYN 138
Query: 305 NPNFKIDGPNEDQFPHTESLKETIMRVLPYWNENIATEIKQGKKVLVVTHGTSLRGLVKH 364
+ +K+ DQ P +ESLK+ + R+LPYWNE IA E+ +GK +L+ HG S R L+KH
Sbjct: 139 DRRYKVCDVPLDQLPRSESLKDVLERLLPYWNERIAPEVLRGKTILISAHGNSSRALLKH 198
Query: 365 I 365
+
Sbjct: 199 L 199
>pdb|1XQ9|A Chain A, Structure Of Phosphoglycerate Mutase From Plasmodium
Falciparum At 2.6 Resolution
pdb|1XQ9|B Chain B, Structure Of Phosphoglycerate Mutase From Plasmodium
Falciparum At 2.6 Resolution
Length = 258
Score = 235 bits (599), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 124/248 (50%), Positives = 165/248 (66%), Gaps = 12/248 (4%)
Query: 6 YTLVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRA 65
YTLV+LRHGES W K N F GW D LSE G +EA AG+ L+++ F+FD V+TS L RA
Sbjct: 12 YTLVLLRHGESTWNKENKFTGWTDVPLSEKGEEEAIAAGKYLKEKNFKFDVVYTSVLKRA 71
Query: 66 QDTVQIILQ--ELGQSPEVTKSWRLNERHYGDLTGYNKLQMANKYGLEQVQIWRRSYDVL 123
T +L+ +L P V K+WRLNERHYG L G NK + A KYG EQV+IWRRSYD+
Sbjct: 72 ICTAWNVLKTADLLHVP-VVKTWRLNERHYGSLQGLNKSETAKKYGEEQVKIWRRSYDIP 130
Query: 124 PPPMTKDHKYYQDIITNPNFKIDGPN--EDQFPHTESLKETIMRVLPYWNENIATEIKQG 181
PP + K+ + P + N +D P TE LK+T+ RVLP+W ++IA +I
Sbjct: 131 PPKLDKEDNRW------PGHNVVYKNVPKDALPFTECLKDTVERVLPFWFDHIAPDILAN 184
Query: 182 KKVLVVTHGTSLRGLVKHIEQLSDAEIMKLNIPTAIPFVYKLDANLTPTKPRQFLCDEET 241
KKV+V HG SLRGLVKH++ LS+A++++LNIPT +P VY+LD NL P K +L D E
Sbjct: 185 KKVMVAAHGNSLRGLVKHLDNLSEADVLELNIPTGVPLVYELDENLKPIK-HYYLLDSEE 243
Query: 242 VSKAMEKI 249
+ K M+++
Sbjct: 244 LKKKMDEV 251
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 82/154 (53%), Gaps = 17/154 (11%)
Query: 221 YKLDANLTPTKPRQFLCDEETVSKAMEKILKVHVGRPWGLQSHVF--LLGINNN-----F 273
+K D T R +C V K + +L V V + W L + L G+N + +
Sbjct: 58 FKFDVVYTSVLKRA-ICTAWNVLKTAD-LLHVPVVKTWRLNERHYGSLQGLNKSETAKKY 115
Query: 274 ARFQVQIWRRSYDVLPPPMTKDHKYYQDIITNPNFKIDGPN--EDQFPHTESLKETIMRV 331
QV+IWRRSYD+ PP + K+ + P + N +D P TE LK+T+ RV
Sbjct: 116 GEEQVKIWRRSYDIPPPKLDKEDNRW------PGHNVVYKNVPKDALPFTECLKDTVERV 169
Query: 332 LPYWNENIATEIKQGKKVLVVTHGTSLRGLVKHI 365
LP+W ++IA +I KKV+V HG SLRGLVKH+
Sbjct: 170 LPFWFDHIAPDILANKKVMVAAHGNSLRGLVKHL 203
>pdb|3KKK|A Chain A, Y92c Catalytic Residue Mutant Of Phosphoglycerate Mutase
From Plasmodium Falciparum
pdb|3KKK|B Chain B, Y92c Catalytic Residue Mutant Of Phosphoglycerate Mutase
From Plasmodium Falciparum
pdb|3KKK|C Chain C, Y92c Catalytic Residue Mutant Of Phosphoglycerate Mutase
From Plasmodium Falciparum
pdb|3KKK|D Chain D, Y92c Catalytic Residue Mutant Of Phosphoglycerate Mutase
From Plasmodium Falciparum
Length = 258
Score = 232 bits (591), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 123/248 (49%), Positives = 164/248 (66%), Gaps = 12/248 (4%)
Query: 6 YTLVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRA 65
YTLV+LRHGES W K N F GW D LSE G +EA AG+ L+++ F+FD V+TS L RA
Sbjct: 12 YTLVLLRHGESTWNKENKFTGWTDVPLSEKGEEEAIAAGKYLKEKNFKFDVVYTSVLKRA 71
Query: 66 QDTVQIILQ--ELGQSPEVTKSWRLNERHYGDLTGYNKLQMANKYGLEQVQIWRRSYDVL 123
T +L+ +L P V K+WRLNERH G L G NK + A KYG EQV+IWRRSYD+
Sbjct: 72 ICTAWNVLKTADLLHVP-VVKTWRLNERHCGSLQGLNKSETAKKYGEEQVKIWRRSYDIP 130
Query: 124 PPPMTKDHKYYQDIITNPNFKIDGPN--EDQFPHTESLKETIMRVLPYWNENIATEIKQG 181
PP + K+ + P + N +D P TE LK+T+ RVLP+W ++IA +I
Sbjct: 131 PPKLDKEDNRW------PGHNVVYKNVPKDALPFTECLKDTVERVLPFWFDHIAPDILAN 184
Query: 182 KKVLVVTHGTSLRGLVKHIEQLSDAEIMKLNIPTAIPFVYKLDANLTPTKPRQFLCDEET 241
KKV+V HG SLRGLVKH++ LS+A++++LNIPT +P VY+LD NL P K +L D E
Sbjct: 185 KKVMVAAHGNSLRGLVKHLDNLSEADVLELNIPTGVPLVYELDENLKPIK-HYYLLDSEE 243
Query: 242 VSKAMEKI 249
+ K M+++
Sbjct: 244 LKKKMDEV 251
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 83/154 (53%), Gaps = 17/154 (11%)
Query: 221 YKLDANLTPTKPRQFLCDEETVSKAMEKILKVHVGRPWGL-QSHV-FLLGINNN-----F 273
+K D T R +C V K + +L V V + W L + H L G+N + +
Sbjct: 58 FKFDVVYTSVLKRA-ICTAWNVLKTAD-LLHVPVVKTWRLNERHCGSLQGLNKSETAKKY 115
Query: 274 ARFQVQIWRRSYDVLPPPMTKDHKYYQDIITNPNFKIDGPN--EDQFPHTESLKETIMRV 331
QV+IWRRSYD+ PP + K+ + P + N +D P TE LK+T+ RV
Sbjct: 116 GEEQVKIWRRSYDIPPPKLDKEDNRW------PGHNVVYKNVPKDALPFTECLKDTVERV 169
Query: 332 LPYWNENIATEIKQGKKVLVVTHGTSLRGLVKHI 365
LP+W ++IA +I KKV+V HG SLRGLVKH+
Sbjct: 170 LPFWFDHIAPDILANKKVMVAAHGNSLRGLVKHL 203
>pdb|1E59|A Chain A, E.Coli Cofactor-Dependent Phosphoglycerate Mutase
Complexed With Vanadate
Length = 249
Score = 230 bits (587), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 115/236 (48%), Positives = 157/236 (66%), Gaps = 6/236 (2%)
Query: 8 LVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRAQD 67
LV++RHGES+W K N F GWYD LSE G+ EA AG++L++EG+ FD +TS L RA
Sbjct: 5 LVLVRHGESQWNKENRFTGWYDVDLSEKGVSEAKAAGKLLKEEGYSFDFAYTSVLKRAIH 64
Query: 68 TVQIILQELGQS-PEVTKSWRLNERHYGDLTGYNKLQMANKYGLEQVQIWRRSYDVLPPP 126
T+ +L EL Q+ V KSW+LNERHYG L G NK + A KYG EQV+ WRR + V PP
Sbjct: 65 TLWNVLDELDQAWLPVEKSWKLNERHYGALQGLNKAETAEKYGDEQVKQWRRGFAVTPPE 124
Query: 127 MTKDHKYYQDIITNPNFKIDGPNEDQFPHTESLKETIMRVLPYWNENIATEIKQGKKVLV 186
+TKD + Y +P + +E + P TESL TI RV+PYWNE I +K G++V++
Sbjct: 125 LTKDDERYPG--HDPRYA--KLSEKELPLTESLALTIDRVIPYWNETILPRMKSGERVII 180
Query: 187 VTHGTSLRGLVKHIEQLSDAEIMKLNIPTAIPFVYKLDANLTPTKPRQFLCDEETV 242
HG SLR LVK+++ +S+ EI++LNIPT +P VY+ D N P K R +L + + +
Sbjct: 181 AAHGNSLRALVKYLDNMSEEEILELNIPTGVPLVYEFDENFKPLK-RYYLGNADEI 235
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 66/119 (55%), Gaps = 11/119 (9%)
Query: 254 VGRPWGLQSHVF--LLGINN-----NFARFQVQIWRRSYDVLPPPMTKDHKYYQDIITNP 306
V + W L + L G+N + QV+ WRR + V PP +TKD + Y +P
Sbjct: 80 VEKSWKLNERHYGALQGLNKAETAEKYGDEQVKQWRRGFAVTPPELTKDDERYPG--HDP 137
Query: 307 NFKIDGPNEDQFPHTESLKETIMRVLPYWNENIATEIKQGKKVLVVTHGTSLRGLVKHI 365
+ +E + P TESL TI RV+PYWNE I +K G++V++ HG SLR LVK++
Sbjct: 138 RYA--KLSEKELPLTESLALTIDRVIPYWNETILPRMKSGERVIIAAHGNSLRALVKYL 194
>pdb|1E58|A Chain A, E.Coli Cofactor-Dependent Phosphoglycerate Mutase
Length = 249
Score = 227 bits (579), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 114/236 (48%), Positives = 156/236 (66%), Gaps = 6/236 (2%)
Query: 8 LVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRAQD 67
LV++R GES+W K N F GWYD LSE G+ EA AG++L++EG+ FD +TS L RA
Sbjct: 5 LVLVRXGESQWNKENRFTGWYDVDLSEKGVSEAKAAGKLLKEEGYSFDFAYTSVLKRAIH 64
Query: 68 TVQIILQELGQS-PEVTKSWRLNERHYGDLTGYNKLQMANKYGLEQVQIWRRSYDVLPPP 126
T+ +L EL Q+ V KSW+LNERHYG L G NK + A KYG EQV+ WRR + V PP
Sbjct: 65 TLWNVLDELDQAWLPVEKSWKLNERHYGALQGLNKAETAEKYGDEQVKQWRRGFAVTPPE 124
Query: 127 MTKDHKYYQDIITNPNFKIDGPNEDQFPHTESLKETIMRVLPYWNENIATEIKQGKKVLV 186
+TKD + Y +P + +E + P TESL TI RV+PYWNE I +K G++V++
Sbjct: 125 LTKDDERYPG--HDPRYA--KLSEKELPLTESLALTIDRVIPYWNETILPRMKSGERVII 180
Query: 187 VTHGTSLRGLVKHIEQLSDAEIMKLNIPTAIPFVYKLDANLTPTKPRQFLCDEETV 242
HG SLR LVK+++ +S+ EI++LNIPT +P VY+ D N P K R +L + + +
Sbjct: 181 AAHGNSLRALVKYLDNMSEEEILELNIPTGVPLVYEFDENFKPLK-RYYLGNADEI 235
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 66/119 (55%), Gaps = 11/119 (9%)
Query: 254 VGRPWGLQSHVF--LLGINN-----NFARFQVQIWRRSYDVLPPPMTKDHKYYQDIITNP 306
V + W L + L G+N + QV+ WRR + V PP +TKD + Y +P
Sbjct: 80 VEKSWKLNERHYGALQGLNKAETAEKYGDEQVKQWRRGFAVTPPELTKDDERYPG--HDP 137
Query: 307 NFKIDGPNEDQFPHTESLKETIMRVLPYWNENIATEIKQGKKVLVVTHGTSLRGLVKHI 365
+ +E + P TESL TI RV+PYWNE I +K G++V++ HG SLR LVK++
Sbjct: 138 RYA--KLSEKELPLTESLALTIDRVIPYWNETILPRMKSGERVIIAAHGNSLRALVKYL 194
>pdb|3EZN|A Chain A, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei 1710b
pdb|3EZN|B Chain B, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei 1710b
pdb|3FDZ|A Chain A, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei 1710b With Bound
2,3-Diphosphoglyceric Acid And 3- Phosphoglyceric Acid
pdb|3GP3|A Chain A, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With 2-Phosphoserine
pdb|3GP3|B Chain B, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With 2-Phosphoserine
pdb|3GP3|C Chain C, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With 2-Phosphoserine
pdb|3GP3|D Chain D, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With 2-Phosphoserine
pdb|3GP5|A Chain A, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With 3-Phosphoglyceric Acid
And Vanadate
pdb|3GP5|B Chain B, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With 3-Phosphoglyceric Acid
And Vanadate
pdb|3GW8|A Chain A, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With Vanadate And Glycerol
pdb|3GW8|B Chain B, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei With Vanadate And Glycerol
Length = 257
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/236 (47%), Positives = 153/236 (64%), Gaps = 6/236 (2%)
Query: 6 YTLVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRA 65
Y LV++RHGES W K N F GW D L+E G +EA AGQ+L++ G+ FD +TS L RA
Sbjct: 10 YKLVLIRHGESTWNKENRFTGWVDVDLTEQGNREARQAGQLLKEAGYTFDIAYTSVLKRA 69
Query: 66 QDTVQIILQELG-QSPEVTKSWRLNERHYGDLTGYNKLQMANKYGLEQVQIWRRSYDVLP 124
T+ + ++ V SWRLNERHYG L+G NK + A KYG EQV +WRRSYD P
Sbjct: 70 IRTLWHVQDQMDLMYVPVVHSWRLNERHYGALSGLNKAETAAKYGDEQVLVWRRSYDTPP 129
Query: 125 PPMTKDHKYYQDIITNPNFKIDGPNEDQFPHTESLKETIMRVLPYWNENIATEIKQGKKV 184
P + + + +P + P E Q P TE LK+T+ RVLP WNE+IA +K GK+V
Sbjct: 130 PALEPGDE--RAPYADPRYA-KVPRE-QLPLTECLKDTVARVLPLWNESIAPAVKAGKQV 185
Query: 185 LVVTHGTSLRGLVKHIEQLSDAEIMKLNIPTAIPFVYKLDANLTPTKPRQFLCDEE 240
L+ HG SLR L+K+++ +SDA+I+ LNIP +P VY+LD +LTP + +L D+E
Sbjct: 186 LIAAHGNSLRALIKYLDGISDADIVGLNIPNGVPLVYELDESLTPIR-HYYLGDQE 240
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 56/89 (62%), Gaps = 4/89 (4%)
Query: 277 QVQIWRRSYDVLPPPMTKDHKYYQDIITNPNFKIDGPNEDQFPHTESLKETIMRVLPYWN 336
QV +WRRSYD PP + + + +P + P E Q P TE LK+T+ RVLP WN
Sbjct: 117 QVLVWRRSYDTPPPALEPGDE--RAPYADPRYA-KVPRE-QLPLTECLKDTVARVLPLWN 172
Query: 337 ENIATEIKQGKKVLVVTHGTSLRGLVKHI 365
E+IA +K GK+VL+ HG SLR L+K++
Sbjct: 173 ESIAPAVKAGKQVLIAAHGNSLRALIKYL 201
>pdb|3LNT|A Chain A, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei 1710b With Bound Malonic Acid
pdb|3LNT|B Chain B, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei 1710b With Bound Malonic Acid
Length = 250
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/236 (47%), Positives = 153/236 (64%), Gaps = 6/236 (2%)
Query: 6 YTLVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRA 65
Y LV++RHGES W K N F GW D L+E G +EA AGQ+L++ G+ FD +TS L RA
Sbjct: 3 YKLVLIRHGESTWNKENRFTGWVDVDLTEQGNREARQAGQLLKEAGYTFDIAYTSVLKRA 62
Query: 66 QDTVQIILQELG-QSPEVTKSWRLNERHYGDLTGYNKLQMANKYGLEQVQIWRRSYDVLP 124
T+ + ++ V SWRLNERHYG L+G NK + A KYG EQV +WRRSYD P
Sbjct: 63 IRTLWHVQDQMDLMYVPVVHSWRLNERHYGALSGLNKAETAAKYGDEQVLVWRRSYDTPP 122
Query: 125 PPMTKDHKYYQDIITNPNFKIDGPNEDQFPHTESLKETIMRVLPYWNENIATEIKQGKKV 184
P + + + +P + P E Q P TE LK+T+ RVLP WNE+IA +K GK+V
Sbjct: 123 PALEPGDE--RAPYADPRYA-KVPRE-QLPLTECLKDTVARVLPLWNESIAPAVKAGKQV 178
Query: 185 LVVTHGTSLRGLVKHIEQLSDAEIMKLNIPTAIPFVYKLDANLTPTKPRQFLCDEE 240
L+ HG SLR L+K+++ +SDA+I+ LNIP +P VY+LD +LTP + +L D+E
Sbjct: 179 LIAAHGNSLRALIKYLDGISDADIVGLNIPNGVPLVYELDESLTPIR-HYYLGDQE 233
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 56/89 (62%), Gaps = 4/89 (4%)
Query: 277 QVQIWRRSYDVLPPPMTKDHKYYQDIITNPNFKIDGPNEDQFPHTESLKETIMRVLPYWN 336
QV +WRRSYD PP + + + +P + P E Q P TE LK+T+ RVLP WN
Sbjct: 110 QVLVWRRSYDTPPPALEPGDE--RAPYADPRYA-KVPRE-QLPLTECLKDTVARVLPLWN 165
Query: 337 ENIATEIKQGKKVLVVTHGTSLRGLVKHI 365
E+IA +K GK+VL+ HG SLR L+K++
Sbjct: 166 ESIAPAVKAGKQVLIAAHGNSLRALIKYL 194
>pdb|1QHF|A Chain A, Yeast Phosphoglycerate Mutase-3pg Complex Structure To 1.7
A
pdb|1QHF|B Chain B, Yeast Phosphoglycerate Mutase-3pg Complex Structure To 1.7
A
Length = 240
Score = 219 bits (557), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 112/233 (48%), Positives = 153/233 (65%), Gaps = 5/233 (2%)
Query: 8 LVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRAQD 67
LV++RHG+SEW ++NLF GW D KLS G +EA AG++L+++ D ++TS+LSRA
Sbjct: 3 LVLVRHGQSEWNEKNLFTGWVDVKLSAKGQQEAARAGELLKEKKVYPDVLYTSKLSRAIQ 62
Query: 68 TVQIILQELGQS-PEVTKSWRLNERHYGDLTGYNKLQMANKYGLEQVQIWRRSYDVLPPP 126
T I L++ + V +SWRLNERHYGDL G +K + K+G E+ +RRS+DV PPP
Sbjct: 63 TANIALEKADRLWIPVNRSWRLNERHYGDLQGKDKAETLKKFGEEKFNTYRRSFDVPPPP 122
Query: 127 MTKDHKYYQDIITNPNFKIDGPNEDQFPHTESLKETIMRVLPYWNENIATEIKQGKKVLV 186
+ + Q + +K PN P TESL I R+LPYW + IA ++ GK V++
Sbjct: 123 IDASSPFSQK--GDERYKYVDPN--VLPETESLALVIDRLLPYWQDVIAKDLLSGKTVMI 178
Query: 187 VTHGTSLRGLVKHIEQLSDAEIMKLNIPTAIPFVYKLDANLTPTKPRQFLCDE 239
HG SLRGLVKH+E +SDA+I KLNIPT IP V++LD NL P+KP +L E
Sbjct: 179 AAHGNSLRGLVKHLEGISDADIAKLNIPTGIPLVFELDENLKPSKPSYYLDPE 231
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 70/135 (51%), Gaps = 13/135 (9%)
Query: 240 ETVSKAMEKI--LKVHVGRPWGLQSHVF--LLGINN-----NFARFQVQIWRRSYDVLPP 290
+T + A+EK L + V R W L + L G + F + +RRS+DV PP
Sbjct: 62 QTANIALEKADRLWIPVNRSWRLNERHYGDLQGKDKAETLKKFGEEKFNTYRRSFDVPPP 121
Query: 291 PMTKDHKYYQDIITNPNFKIDGPNEDQFPHTESLKETIMRVLPYWNENIATEIKQGKKVL 350
P+ + Q + +K PN P TESL I R+LPYW + IA ++ GK V+
Sbjct: 122 PIDASSPFSQK--GDERYKYVDPN--VLPETESLALVIDRLLPYWQDVIAKDLLSGKTVM 177
Query: 351 VVTHGTSLRGLVKHI 365
+ HG SLRGLVKH+
Sbjct: 178 IAAHGNSLRGLVKHL 192
>pdb|4PGM|A Chain A, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|4PGM|B Chain B, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|4PGM|C Chain C, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|4PGM|D Chain D, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|1BQ3|D Chain D, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Inositol Hexakisphosphate
pdb|1BQ3|C Chain C, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Inositol Hexakisphosphate
pdb|1BQ3|A Chain A, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Inositol Hexakisphosphate
pdb|1BQ3|B Chain B, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Inositol Hexakisphosphate
pdb|1BQ4|D Chain D, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Benzene Hexacarboxylate
pdb|1BQ4|C Chain C, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Benzene Hexacarboxylate
pdb|1BQ4|A Chain A, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Benzene Hexacarboxylate
pdb|1BQ4|B Chain B, Saccharomyces Cerevisiae Phosphoglycerate Mutase In
Complex With Benzene Hexacarboxylate
pdb|5PGM|D Chain D, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|5PGM|C Chain C, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|5PGM|A Chain A, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|5PGM|B Chain B, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|5PGM|F Chain F, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|5PGM|G Chain G, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|5PGM|H Chain H, Saccharomyces Cerevisiae Phosphoglycerate Mutase
pdb|5PGM|E Chain E, Saccharomyces Cerevisiae Phosphoglycerate Mutase
Length = 246
Score = 219 bits (557), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 112/233 (48%), Positives = 153/233 (65%), Gaps = 5/233 (2%)
Query: 8 LVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRAQD 67
LV++RHG+SEW ++NLF GW D KLS G +EA AG++L+++ D ++TS+LSRA
Sbjct: 3 LVLVRHGQSEWNEKNLFTGWVDVKLSAKGQQEAARAGELLKEKKVYPDVLYTSKLSRAIQ 62
Query: 68 TVQIILQELGQS-PEVTKSWRLNERHYGDLTGYNKLQMANKYGLEQVQIWRRSYDVLPPP 126
T I L++ + V +SWRLNERHYGDL G +K + K+G E+ +RRS+DV PPP
Sbjct: 63 TANIALEKADRLWIPVNRSWRLNERHYGDLQGKDKAETLKKFGEEKFNTYRRSFDVPPPP 122
Query: 127 MTKDHKYYQDIITNPNFKIDGPNEDQFPHTESLKETIMRVLPYWNENIATEIKQGKKVLV 186
+ + Q + +K PN P TESL I R+LPYW + IA ++ GK V++
Sbjct: 123 IDASSPFSQK--GDERYKYVDPN--VLPETESLALVIDRLLPYWQDVIAKDLLSGKTVMI 178
Query: 187 VTHGTSLRGLVKHIEQLSDAEIMKLNIPTAIPFVYKLDANLTPTKPRQFLCDE 239
HG SLRGLVKH+E +SDA+I KLNIPT IP V++LD NL P+KP +L E
Sbjct: 179 AAHGNSLRGLVKHLEGISDADIAKLNIPTGIPLVFELDENLKPSKPSYYLDPE 231
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 70/135 (51%), Gaps = 13/135 (9%)
Query: 240 ETVSKAMEKI--LKVHVGRPWGLQSHVF--LLGINN-----NFARFQVQIWRRSYDVLPP 290
+T + A+EK L + V R W L + L G + F + +RRS+DV PP
Sbjct: 62 QTANIALEKADRLWIPVNRSWRLNERHYGDLQGKDKAETLKKFGEEKFNTYRRSFDVPPP 121
Query: 291 PMTKDHKYYQDIITNPNFKIDGPNEDQFPHTESLKETIMRVLPYWNENIATEIKQGKKVL 350
P+ + Q + +K PN P TESL I R+LPYW + IA ++ GK V+
Sbjct: 122 PIDASSPFSQK--GDERYKYVDPN--VLPETESLALVIDRLLPYWQDVIAKDLLSGKTVM 177
Query: 351 VVTHGTSLRGLVKHI 365
+ HG SLRGLVKH+
Sbjct: 178 IAAHGNSLRGLVKHL 192
>pdb|3FDZ|B Chain B, Crystal Structure Of Phosphoglyceromutase From
Burkholderia Pseudomallei 1710b With Bound
2,3-Diphosphoglyceric Acid And 3- Phosphoglyceric Acid
Length = 257
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 112/236 (47%), Positives = 152/236 (64%), Gaps = 6/236 (2%)
Query: 6 YTLVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRA 65
Y LV++R GES W K N F GW D L+E G +EA AGQ+L++ G+ FD +TS L RA
Sbjct: 10 YKLVLIRXGESTWNKENRFTGWVDVDLTEQGNREARQAGQLLKEAGYTFDIAYTSVLKRA 69
Query: 66 QDTVQIILQELG-QSPEVTKSWRLNERHYGDLTGYNKLQMANKYGLEQVQIWRRSYDVLP 124
T+ + ++ V SWRLNERHYG L+G NK + A KYG EQV +WRRSYD P
Sbjct: 70 IRTLWHVQDQMDLMYVPVVHSWRLNERHYGALSGLNKAETAAKYGDEQVLVWRRSYDTPP 129
Query: 125 PPMTKDHKYYQDIITNPNFKIDGPNEDQFPHTESLKETIMRVLPYWNENIATEIKQGKKV 184
P + + + +P + P E Q P TE LK+T+ RVLP WNE+IA +K GK+V
Sbjct: 130 PALEPGDE--RAPYADPRYA-KVPRE-QLPLTECLKDTVARVLPLWNESIAPAVKAGKQV 185
Query: 185 LVVTHGTSLRGLVKHIEQLSDAEIMKLNIPTAIPFVYKLDANLTPTKPRQFLCDEE 240
L+ HG SLR L+K+++ +SDA+I+ LNIP +P VY+LD +LTP + +L D+E
Sbjct: 186 LIAAHGNSLRALIKYLDGISDADIVGLNIPNGVPLVYELDESLTPIR-HYYLGDQE 240
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 56/89 (62%), Gaps = 4/89 (4%)
Query: 277 QVQIWRRSYDVLPPPMTKDHKYYQDIITNPNFKIDGPNEDQFPHTESLKETIMRVLPYWN 336
QV +WRRSYD PP + + + +P + P E Q P TE LK+T+ RVLP WN
Sbjct: 117 QVLVWRRSYDTPPPALEPGDE--RAPYADPRYA-KVPRE-QLPLTECLKDTVARVLPLWN 172
Query: 337 ENIATEIKQGKKVLVVTHGTSLRGLVKHI 365
E+IA +K GK+VL+ HG SLR L+K++
Sbjct: 173 ESIAPAVKAGKQVLIAAHGNSLRALIKYL 201
>pdb|3D8H|A Chain A, Crystal Structure Of Phosphoglycerate Mutase From
Cryptosporidium Parvum, Cgd7_4270
pdb|3D8H|B Chain B, Crystal Structure Of Phosphoglycerate Mutase From
Cryptosporidium Parvum, Cgd7_4270
Length = 267
Score = 204 bits (520), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 111/245 (45%), Positives = 149/245 (60%), Gaps = 6/245 (2%)
Query: 6 YTLVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRA 65
Y L ++RHGESEW K N F GW D LSE G+ EA AG++L ++GF+FD V+TS L RA
Sbjct: 21 YKLTLIRHGESEWNKENRFTGWTDVSLSEQGVSEAIEAGRMLLEKGFKFDVVYTSVLKRA 80
Query: 66 QDTVQIILQELGQ-SPEVTKSWRLNERHYGDLTGYNKLQMANKYGLEQVQIWRRSYDVLP 124
T +L+ELG + + WRLNERHYG L G NK + A+K+G +QV+IWRRS+DV P
Sbjct: 81 IMTTWTVLKELGNINCPIINHWRLNERHYGALQGLNKSETASKFGEDQVKIWRRSFDVPP 140
Query: 125 PPMTKDHKYYQDIITNPNFKIDGPNEDQFPHTESLKETIMRVLPYWNENIATEIKQGKKV 184
P + K + G P TE LK+T+ RV PY+ + IA I GK V
Sbjct: 141 PVLEKSDPRWP----GNELIYKGICPSCLPTTECLKDTVERVKPYFEDVIAPSIMSGKSV 196
Query: 185 LVVTHGTSLRGLVKHIEQLSDAEIMKLNIPTAIPFVYKLDANLTPTKPRQFLCDEETVSK 244
LV HG SLR L+ +E ++ +I+++NIPTA P V +LD L TK + +L EE +
Sbjct: 197 LVSAHGNSLRALLYLLEGMTPEQILEVNIPTACPLVLELDDYLKVTK-KYYLISEEELKA 255
Query: 245 AMEKI 249
ME +
Sbjct: 256 KMEAV 260
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 271 NNFARFQVQIWRRSYDVLPPPMTKDHKYYQDIITNPNFKIDGPNEDQFPHTESLKETIMR 330
+ F QV+IWRRS+DV PP + K + G P TE LK+T+ R
Sbjct: 122 SKFGEDQVKIWRRSFDVPPPVLEKSDPRWP----GNELIYKGICPSCLPTTECLKDTVER 177
Query: 331 VLPYWNENIATEIKQGKKVLVVTHGTSLRGLV 362
V PY+ + IA I GK VLV HG SLR L+
Sbjct: 178 VKPYFEDVIAPSIMSGKSVLVSAHGNSLRALL 209
>pdb|3PGM|A Chain A, The Structure Of Yeast Phosphoglycerate Mutase At 0.28 Nm
Resolution
pdb|3PGM|B Chain B, The Structure Of Yeast Phosphoglycerate Mutase At 0.28 Nm
Resolution
Length = 244
Score = 204 bits (518), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 109/233 (46%), Positives = 147/233 (63%), Gaps = 7/233 (3%)
Query: 8 LVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRAQD 67
LV++RHG+SEW ++NLF GW D KLS G +EA AG++L+++G +TS+LSRA
Sbjct: 3 LVLVRHGQSEWNEKNLFTGWVDVKLSAKGQQEAARAGELLKEKGVNVLVDYTSKLSRAIQ 62
Query: 68 TVQIILQELGQS-PEVTKSWRLNERHYGDLTGYNKLQMANKYGLEQVQIWRRSYDVLPPP 126
T I L++ + V +SWRLNERHYGDL G +K Q K+G E+ +RRS+DV PPP
Sbjct: 63 TANIALEKADRLWIPVNRSWRLNERHYGDLQGKDKAQTLKKFGEEKFNTYRRSFDVPPPP 122
Query: 127 MTKDHKYYQDIITNPNFKIDGPNEDQFPHTESLKETIMRVLPYWNENIATEIKQGKKVLV 186
+ + Q + +K PN P TESL I R+LPYW + IA + GK ++
Sbjct: 123 IDASSPFSQK--GDERYKYVDPN--VLPETESLALVIDRLLPYWQDVIAKLV--GKTSMI 176
Query: 187 VTHGTSLRGLVKHIEQLSDAEIMKLNIPTAIPFVYKLDANLTPTKPRQFLCDE 239
HG SLRGLVKH+E +SDA+I KLNIP V++LD NL P+KP +L E
Sbjct: 177 AAHGNSLRGLVKHLEGISDADIAKLNIPPGTILVFELDENLKPSKPSYYLDPE 229
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 68/135 (50%), Gaps = 15/135 (11%)
Query: 240 ETVSKAMEKI--LKVHVGRPWGLQSHVF--LLGINN-----NFARFQVQIWRRSYDVLPP 290
+T + A+EK L + V R W L + L G + F + +RRS+DV PP
Sbjct: 62 QTANIALEKADRLWIPVNRSWRLNERHYGDLQGKDKAQTLKKFGEEKFNTYRRSFDVPPP 121
Query: 291 PMTKDHKYYQDIITNPNFKIDGPNEDQFPHTESLKETIMRVLPYWNENIATEIKQGKKVL 350
P+ + Q + +K PN P TESL I R+LPYW + IA + GK +
Sbjct: 122 PIDASSPFSQK--GDERYKYVDPN--VLPETESLALVIDRLLPYWQDVIAKLV--GKTSM 175
Query: 351 VVTHGTSLRGLVKHI 365
+ HG SLRGLVKH+
Sbjct: 176 IAAHGNSLRGLVKHL 190
>pdb|4EO9|A Chain A, Crystal Structure Of A Phosphoglycerate Mutase Gpm1 From
Mycobacterium Leprae
Length = 268
Score = 198 bits (504), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 101/243 (41%), Positives = 142/243 (58%), Gaps = 7/243 (2%)
Query: 7 TLVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRAQ 66
TL++LRHGES+W RNLF GW D L++ G EA +G++L + D ++TS L RA
Sbjct: 29 TLILLRHGESDWNARNLFTGWVDVGLTDKGRAEAVRSGELLAEHNLLPDVLYTSLLRRAI 88
Query: 67 DTVQIILQELGQS-PEVTKSWRLNERHYGDLTGYNKLQMANKYGLEQVQIWRRSYDVLPP 125
T + L V +SWRLNERHYG L G +K +YG E+ WRRSYD PP
Sbjct: 89 TTAHLALDTADWLWIPVRRSWRLNERHYGALQGLDKAVTKARYGEERFMAWRRSYDTPPP 148
Query: 126 PMTKDHKYYQDIITNPNFKIDGPNEDQFPHTESLKETIMRVLPYWNENIATEIKQGKKVL 185
P+ K ++ QD +P + G P TE L + + R LPY+ + I +++ G+ VL
Sbjct: 149 PIEKGSEFSQD--ADPRYTDIGGG----PLTECLADVVTRFLPYFTDVIVPDLRTGRTVL 202
Query: 186 VVTHGTSLRGLVKHIEQLSDAEIMKLNIPTAIPFVYKLDANLTPTKPRQFLCDEETVSKA 245
+V HG SLR LVKH++++SD E++ LN+PT IP Y LDA+L P P D E +
Sbjct: 203 IVAHGNSLRALVKHLDEMSDDEVVGLNVPTGIPLRYDLDADLRPVVPGGTYLDPEAAAAV 262
Query: 246 MEK 248
+ +
Sbjct: 263 ISQ 265
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 10/113 (8%)
Query: 253 HVGRPWGLQSHVFLLGINNNFARFQVQIWRRSYDVLPPPMTKDHKYYQDIITNPNFKIDG 312
H G GL V + + WRRSYD PPP+ K ++ QD +P + G
Sbjct: 115 HYGALQGLDKAV----TKARYGEERFMAWRRSYDTPPPPIEKGSEFSQD--ADPRYTDIG 168
Query: 313 PNEDQFPHTESLKETIMRVLPYWNENIATEIKQGKKVLVVTHGTSLRGLVKHI 365
P TE L + + R LPY+ + I +++ G+ VL+V HG SLR LVKH+
Sbjct: 169 GG----PLTECLADVVTRFLPYFTDVIVPDLRTGRTVLIVAHGNSLRALVKHL 217
>pdb|1FZT|A Chain A, Solution Structure And Dynamics Of An Open B-Sheet,
Glycolytic Enzyme-Monomeric 23.7 Kda Phosphoglycerate
Mutase From Schizosaccharomyces Pombe
Length = 211
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 104/220 (47%), Positives = 132/220 (60%), Gaps = 30/220 (13%)
Query: 8 LVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRAQD 67
LV+ RHGESEW K NLF GW D LSE GIKEA + G+ L+ G++FD FTS L RAQ
Sbjct: 10 LVLTRHGESEWNKLNLFTGWKDPALSETGIKEAKLGGERLKSRGYKFDIAFTSALQRAQK 69
Query: 68 TVQIILQELGQ-SPEVTKSWRLNERHYGDLTGYNKLQMANKYGLEQVQIWRRSYDVLPPP 126
T QIIL+E+G+ + E KS +LNER+YGDL G NK K+G EQVQIWRRSYD+ P
Sbjct: 70 TCQIILEEVGEPNLETIKSEKLNERYYGDLQGLNKDDARKKWGAEQVQIWRRSYDIAP-- 127
Query: 127 MTKDHKYYQDIITNPNFKIDGPNEDQFPHTESLKETIMRVLPYWNENIATEIKQGKKVLV 186
P+ ESLK+T RVLPY+ I I +G+KVL+
Sbjct: 128 ---------------------------PNGESLKDTAERVLPYYKSTIVPHILKGEKVLI 160
Query: 187 VTHGTSLRGLVKHIEQLSDAEIMKLNIPTAIPFVYKLDAN 226
HG SLR L+ +E L+ +I+K + T +P VY LD +
Sbjct: 161 AAHGNSLRALIMDLEGLTGDQIVKRELATGVPIVYHLDKD 200
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 49/102 (48%), Gaps = 34/102 (33%)
Query: 266 LLGINNNFARF-----QVQIWRRSYDVLPPPMTKDHKYYQDIITNPNFKIDGPNEDQFPH 320
L G+N + AR QVQIWRRSYD+ PP +
Sbjct: 99 LQGLNKDDARKKWGAEQVQIWRRSYDIAPP-----------------------------N 129
Query: 321 TESLKETIMRVLPYWNENIATEIKQGKKVLVVTHGTSLRGLV 362
ESLK+T RVLPY+ I I +G+KVL+ HG SLR L+
Sbjct: 130 GESLKDTAERVLPYYKSTIVPHILKGEKVLIAAHGNSLRALI 171
>pdb|1RII|A Chain A, Crystal Structure Of Phosphoglycerate Mutase From M.
Tuberculosis
pdb|1RII|B Chain B, Crystal Structure Of Phosphoglycerate Mutase From M.
Tuberculosis
pdb|1RII|C Chain C, Crystal Structure Of Phosphoglycerate Mutase From M.
Tuberculosis
pdb|1RII|D Chain D, Crystal Structure Of Phosphoglycerate Mutase From M.
Tuberculosis
Length = 265
Score = 193 bits (490), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/224 (43%), Positives = 136/224 (60%), Gaps = 7/224 (3%)
Query: 7 TLVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRAQ 66
+LV+LRHGES+W NLF GW D L++ G EA +G+++ + D ++TS L RA
Sbjct: 6 SLVLLRHGESDWNALNLFTGWVDVGLTDKGQAEAVRSGELIAEHDLLPDVLYTSLLRRAI 65
Query: 67 DTVQIILQELGQS-PEVTKSWRLNERHYGDLTGYNKLQMANKYGLEQVQIWRRSYDVLPP 125
T + L + V +SWRLNERHYG L G +K + +YG EQ WRRSYD PP
Sbjct: 66 TTAHLALDSADRLWIPVRRSWRLNERHYGALQGLDKAETKARYGEEQFMAWRRSYDTPPP 125
Query: 126 PMTKDHKYYQDIITNPNFKIDGPNEDQFPHTESLKETIMRVLPYWNENIATEIKQGKKVL 185
P+ + ++ QD +P + G P TE L + + R LPY+ + I +++ GK VL
Sbjct: 126 PIERGSQFSQD--ADPRYADIGGG----PLTECLADVVARFLPYFTDVIVGDLRVGKTVL 179
Query: 186 VVTHGTSLRGLVKHIEQLSDAEIMKLNIPTAIPFVYKLDANLTP 229
+V HG SLR LVKH++Q+SD EI+ LNIPT IP Y LD+ + P
Sbjct: 180 IVAHGNSLRALVKHLDQMSDDEIVGLNIPTGIPLRYDLDSAMRP 223
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Query: 273 FARFQVQIWRRSYDVLPPPMTKDHKYYQDIITNPNFKIDGPNEDQFPHTESLKETIMRVL 332
+ Q WRRSYD PPP+ + ++ QD +P + G P TE L + + R L
Sbjct: 108 YGEEQFMAWRRSYDTPPPPIERGSQFSQD--ADPRYADIGGG----PLTECLADVVARFL 161
Query: 333 PYWNENIATEIKQGKKVLVVTHGTSLRGLVKHI 365
PY+ + I +++ GK VL+V HG SLR LVKH+
Sbjct: 162 PYFTDVIVGDLRVGKTVLIVAHGNSLRALVKHL 194
>pdb|3DCY|A Chain A, Crystal Structure A Tp53-Induced Glycolysis And Apoptosis
Regulator Protein From Homo Sapiens
Length = 275
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 102/231 (44%), Gaps = 32/231 (13%)
Query: 6 YTLVMLRHGESEWTKRNLFCG-WYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSR 64
+ L ++RHGE+ + K + G D LSE G K+A AG L + +F H F+S L R
Sbjct: 9 FALTVVRHGETRFNKEKIIQGQGVDEPLSETGFKQAAAAGIFLNN--VKFTHAFSSDLXR 66
Query: 65 AQDTVQIILQELGQSPEVTKSW--RLNERHYGDLTG--YNKLQMANKYGLEQVQIWR--- 117
+ T IL+ + T + RL ER YG + G ++L+ K E+ ++
Sbjct: 67 TKQTXHGILERSKFCKDXTVKYDSRLRERKYGVVEGKALSELRAXAKAAREECPVFTPPG 126
Query: 118 -RSYDVLPPPMTKDHKYYQDIITNPNFKIDGPNEDQFPH---TESLKETIMRVLPYWNEN 173
+ D + ++ +I + ++QF + L+ ++ + P +N
Sbjct: 127 GETLDQVKXRGIDFFEFLCQLILK-----EADQKEQFSQGSPSNCLETSLAEIFP-LGKN 180
Query: 174 IATEIKQ-------GKKVLVVTHGTSLRGLVKHIEQLSDAEIMKLNIPTAI 217
++++ VLVV+HG R L + L+D +K ++P +
Sbjct: 181 HSSKVNSDSGIPGLAASVLVVSHGAYXRSLFDYF--LTD---LKCSLPATL 226
>pdb|3E9C|A Chain A, Structure Of A Tryptic Core Fragment Of Tigar From Danio
Rerio
pdb|3E9C|B Chain B, Structure Of A Tryptic Core Fragment Of Tigar From Danio
Rerio
pdb|3E9D|A Chain A, Structure Of Full-Length Tigar From Danio Rerio
pdb|3E9D|B Chain B, Structure Of Full-Length Tigar From Danio Rerio
Length = 265
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 28/207 (13%)
Query: 6 YTLVMLRHGESEWTKRNLFCG-WYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSR 64
+ L ++RHGE+++ + L G D+ LS+ G ++A AG+ L+D F +VF S L R
Sbjct: 4 FALTIVRHGETQYNRDKLLQGQGIDTPLSDTGHQQAAAAGRYLKD--LHFTNVFVSNLQR 61
Query: 65 AQDTVQIILQE--LGQSPEVTKSWRLNERHYGDLTGYNK---LQMANKYGLEQVQIWRRS 119
A T +IIL + E+ L ER +G G K MAN G +
Sbjct: 62 AIQTAEIILGNNLHSSATEMILDPLLRERGFGVAEGRPKEHLKNMANAAG-------QSC 114
Query: 120 YDVLPPP------MTKDHKYYQDIITNPNFKIDGPNEDQFPHTESLKETIMRVLPYWNEN 173
D PP + K + + F+ G P +E+ + I + +N
Sbjct: 115 RDYTPPGGETLEQVKTRFKMFLKSLFQRMFEEHGSALSSVP-SEADQPVIAGLADDGAQN 173
Query: 174 IATEIKQGKKVLVVTHGTSLRGLVKHI 200
+ L+V+HG +R V+H+
Sbjct: 174 VPVH------ALMVSHGAFIRISVRHL 194
>pdb|1H2E|A Chain A, Bacillus Stearothermophilus Phoe (Previously Known As
Yhfr) In Complex With Phosphate
pdb|1H2F|A Chain A, Bacillus Stearothermophilus Phoe (Previously Known As
Yhfr) In Complex With Trivanadate
Length = 207
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 7 TLVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRAQ 66
TL + RHGE++W GW DS L+E G ++A G+ R E + ++TS RA
Sbjct: 3 TLYLTRHGETKWNVERRMQGWQDSPLTEKGRQDAMRLGK--RLEAVELAAIYTSTSGRAL 60
Query: 67 DTVQIILQELGQSPEVTKSWRLNERHYGDLTG 98
+T +I+ G+ + + RL E H GD G
Sbjct: 61 ETAEIVRG--GRLIPIYQDERLREIHLGDWEG 90
>pdb|1EBB|A Chain A, Bacillus Stearothermophilus Yhfr
Length = 202
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 7 TLVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRAQ 66
TL + RHGE++W GW DS L+E G ++A G+ R E + ++TS RA
Sbjct: 3 TLYLTRHGETKWNVERRMQGWQDSPLTEKGRQDAMRLGK--RLEAVELAAIYTSTSGRAL 60
Query: 67 DTVQIILQELGQSPEVTKSWRLNERHYGDLTG 98
+T +I+ G+ + + RL E H GD G
Sbjct: 61 ETAEIV--RGGRLIPIYQDERLREIHLGDWEG 90
>pdb|3E9E|A Chain A, Structure Of Full-Length H11a Mutant Form Of Tigar From
Danio Rerio
pdb|3E9E|B Chain B, Structure Of Full-Length H11a Mutant Form Of Tigar From
Danio Rerio
Length = 265
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 88/207 (42%), Gaps = 28/207 (13%)
Query: 6 YTLVMLRHGESEWTKRNLFCG-WYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSR 64
+ L ++R GE+++ + L G D+ LS+ G ++A AG+ L+D F +VF S L R
Sbjct: 4 FALTIVRAGETQYNRDKLLQGQGIDTPLSDTGHQQAAAAGRYLKD--LHFTNVFVSNLQR 61
Query: 65 AQDTVQIILQE--LGQSPEVTKSWRLNERHYGDLTGYNK---LQMANKYGLEQVQIWRRS 119
A T +IIL + E+ L ER +G G K MAN G +
Sbjct: 62 AIQTAEIILGNNLHSSATEMILDPLLRERGFGVAEGRPKEHLKNMANAAG-------QSC 114
Query: 120 YDVLPPP------MTKDHKYYQDIITNPNFKIDGPNEDQFPHTESLKETIMRVLPYWNEN 173
D PP + K + + F+ G P +E+ + I + +N
Sbjct: 115 RDYTPPGGETLEQVKTRFKMFLKSLFQRMFEEHGSALSSVP-SEADQPVIAGLADDGAQN 173
Query: 174 IATEIKQGKKVLVVTHGTSLRGLVKHI 200
+ L+V+HG +R V+H+
Sbjct: 174 VPVH------ALMVSHGAFIRISVRHL 194
>pdb|3F3K|A Chain A, The Structure Of Uncharacterized Protein Ykr043c From
Saccharomyces Cerevisiae.
pdb|3F3K|B Chain B, The Structure Of Uncharacterized Protein Ykr043c From
Saccharomyces Cerevisiae
Length = 265
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 8 LVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQ-ILRDEGF----QFDHVFTSQL 62
+++RHG++EW+K + G D L+ G + G+ + R+ F ++FTS
Sbjct: 8 CIIVRHGQTEWSKSGQYTGLTDLPLTPYGEGQXLRTGESVFRNNQFLNPDNITYIFTSPR 67
Query: 63 SRAQDTVQIILQELGQSP----EVTKSWRLNERHYGDLTGY---NKLQMANKYGLEQVQI 115
RA+ TV ++L+ L V L E YGD G +++ GL++ +
Sbjct: 68 LRARQTVDLVLKPLSDEQRAKIRVVVDDDLREWEYGDYEGXLTREIIELRKSRGLDKERP 127
Query: 116 W 116
W
Sbjct: 128 W 128
>pdb|2A6P|A Chain A, Structure Solution To 2.2 Angstrom And Functional
Characterisation Of The Open Reading Frame Rv3214 From
Mycobacterium Tuberculosis
pdb|2A6P|B Chain B, Structure Solution To 2.2 Angstrom And Functional
Characterisation Of The Open Reading Frame Rv3214 From
Mycobacterium Tuberculosis
Length = 208
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 80/213 (37%), Gaps = 46/213 (21%)
Query: 6 YTLVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRA 65
+ L++LRHGE+ W+ G + +L++ G +A +AGQ+L + V S R
Sbjct: 11 HRLLLLRHGETAWSTLGRHTGGTEVELTDTGRTQAELAGQLLGELELDDPIVICSPRRRT 70
Query: 66 QDTVQIILQELGQSPEVTKSWRLNERHYGDLTGYNKLQMANKYGLEQVQIWRRSYDVLPP 125
DT ++ + + + W
Sbjct: 71 LDTAKLAGLTVNEVTGLLAEW--------------------------------------- 91
Query: 126 PMTKDHKYYQDIITNPNFKIDGPNEDQFPHTESLKETIMRVLPYWNENIATEIK--QGKK 183
D+ Y+ +T P + P+ + H E++ +V + +A ++ +
Sbjct: 92 ----DYGSYEG-LTTPQIRESEPDWLVWTHGCPAGESVAQVNDRADSAVALALEHMSSRD 146
Query: 184 VLVVTHGTSLRGLVKHIEQLSDAEIMKLNIPTA 216
VL V+HG R ++ QL AE + +PTA
Sbjct: 147 VLFVSHGHFSRAVITRWVQLPLAEGSRFAMPTA 179
>pdb|3LG2|A Chain A, A Ykr043c FRUCTOSE-1,6-Bisphosphate Product Complex
Following Ligand Soaking
pdb|3LG2|B Chain B, A Ykr043c FRUCTOSE-1,6-Bisphosphate Product Complex
Following Ligand Soaking
pdb|3LG2|C Chain C, A Ykr043c FRUCTOSE-1,6-Bisphosphate Product Complex
Following Ligand Soaking
pdb|3LG2|D Chain D, A Ykr043c FRUCTOSE-1,6-Bisphosphate Product Complex
Following Ligand Soaking
Length = 292
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 8 LVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQ-ILRDEGF----QFDHVFTSQL 62
+++RHG++EW+K + G D L+ G + G+ + R+ F ++FTS
Sbjct: 29 CIIVRHGQTEWSKSGQYTGLTDLPLTPYGEGQXLRTGESVFRNNQFLNPDNITYIFTSPR 88
Query: 63 SRAQDTVQIILQELGQSP----EVTKSWRLNERHYGDLTGY---NKLQMANKYGLEQVQI 115
RA+ TV ++L+ L V L E YGD G +++ GL++ +
Sbjct: 89 LRARQTVDLVLKPLSDEQRAKIRVVVDDDLREWEYGDYEGXLTREIIELRKSRGLDKERP 148
Query: 116 W 116
W
Sbjct: 149 W 149
>pdb|3R7A|A Chain A, Crystal Structure Of Phosphoglycerate Mutase From Bacillus
Anthracis Str. Sterne
pdb|3R7A|B Chain B, Crystal Structure Of Phosphoglycerate Mutase From Bacillus
Anthracis Str. Sterne
Length = 237
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 4 DCYTLVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLS 63
+ TL + RHG++ + GW DS L E G++ A G L+D F + ++S
Sbjct: 12 NVVTLYVTRHGKTILNTNHRAQGWADSPLVEKGVEVATNLGTGLKD--IHFXNAYSSDSG 69
Query: 64 RAQDTVQIILQELGQSP-EVTKSWRLNERHYGDLTG 98
RA +T ++L+ QS ++ + +L E ++G G
Sbjct: 70 RAIETANLVLKYSEQSKLKLEQRKKLRELNFGIFEG 105
>pdb|3HJG|A Chain A, Crystal Structure Of Putative Alpha-Ribazole-5'-Phosphate
Phosphatase Cobc From Vibrio Parahaemolyticus
pdb|3HJG|B Chain B, Crystal Structure Of Putative Alpha-Ribazole-5'-Phosphate
Phosphatase Cobc From Vibrio Parahaemolyticus
Length = 213
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 79/200 (39%), Gaps = 40/200 (20%)
Query: 1 MSEDCYTLVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTS 60
MS + ++RHG+ + G D K+ E ++ +A + +G+ + +S
Sbjct: 1 MSLKTLNIYLMRHGKVDAAPG--LHGQTDLKVKEAEQQQIAMA---WKTKGYDVAGIISS 55
Query: 61 QLSRAQDTVQIILQELGQSPEVTKSWRLNERHYGDLTGYNKLQMANKYGLEQVQIWRRSY 120
LSR D QI+ ++ Q +T L E +GD G +
Sbjct: 56 PLSRCHDLAQILAEQ--QLLPMTTEDDLQEMDFGDFDGM-------------------PF 94
Query: 121 DVLPPPMTKDHKYYQDIITNPNFKIDGPNEDQFPHTESLKETIMRVLPYWNENIATEIKQ 180
D+L K ++Q P P+ ESL RV W++ I +I
Sbjct: 95 DLLTEHWKKLDAFWQ-----------SPAHHSLPNAESLSTFSQRVSRAWSQ-IINDIN- 141
Query: 181 GKKVLVVTHGTSLRGLVKHI 200
+L+VTHG +R ++ H+
Sbjct: 142 -DNLLIVTHGGVIRIILAHV 160
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 301 DIITNPNFKIDG----PNEDQFPHTESLKETIMRVLPYWNENIATEIKQGKKVLVVTHGT 356
D++T K+D P P+ ESL RV W++ I +I +L+VTHG
Sbjct: 95 DLLTEHWKKLDAFWQSPAHHSLPNAESLSTFSQRVSRAWSQ-IINDIN--DNLLIVTHGG 151
Query: 357 SLRGLVKHI 365
+R ++ H+
Sbjct: 152 VIRIILAHV 160
>pdb|2P2Y|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
Length = 177
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 8 LVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRAQD 67
L M+RHGE+ W + GW D L+ G +A L F+S L RA+
Sbjct: 3 LWMVRHGETLWNREGRLLGWTDLPLTAEGEAQARRLKGALPSL-----PAFSSDLLRARR 57
Query: 68 TVQIILQELGQSPEVTKSWRLNERHYGDLTG 98
T ++ G SP + L E H+G L G
Sbjct: 58 TAELA----GFSPRLYPE--LREIHFGALEG 82
>pdb|2OWD|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
pdb|2OWD|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
Length = 177
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 8 LVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRAQD 67
L ++RHGE+ W + GW D L+ G +A L F+S L RA+
Sbjct: 3 LWLVRHGETLWNREGRLLGWTDLPLTAEGEAQARRLKGALPSL-----PAFSSDLMRARR 57
Query: 68 TVQIILQELGQSPEVTKSWRLNERHYGDLTG 98
T ++ G SP + L E H+G L G
Sbjct: 58 TAELA----GFSPRLYPE--LREIHFGALEG 82
>pdb|2P6M|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
pdb|2P6M|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
Length = 177
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 8 LVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRAQD 67
L ++RHGE+ W + GW D L+ G +A L F+S L RA+
Sbjct: 3 LWLVRHGETLWNREGRLLGWTDMPLTAEGEAQARRLKGALPSL-----PAFSSDLLRARR 57
Query: 68 TVQIILQELGQSPEVTKSWRLNERHYGDLTG 98
T ++ G SP + L E H+G L G
Sbjct: 58 TAELA----GFSPRLYPE--LREIHFGALEG 82
>pdb|2P6O|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
pdb|2P6O|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
Length = 177
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 8 LVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRAQD 67
L ++RHGE+ W + GW D L+ G +A L F+S L RA+
Sbjct: 3 LWLVRHGETMWNREGRLLGWTDLPLTAEGEAQARRLKGALPSL-----PAFSSDLLRARR 57
Query: 68 TVQIILQELGQSPEVTKSWRLNERHYGDLTG 98
T ++ G SP + L E H+G L G
Sbjct: 58 TAELA----GFSPRLYPE--LREIHFGALEG 82
>pdb|2P9Y|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
pdb|2P9Y|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
Length = 177
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 11/101 (10%)
Query: 8 LVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRAQD 67
L ++RHGE+ W + GW D L+ G +A L F+S L RA+
Sbjct: 3 LWLVRHGETLWNREGRLLGWTDLPLTAEGEAQARRLKGALPSL-----PAFSSDLLRARR 57
Query: 68 TVQIILQELGQSPEVTKSWRLNERHYGDLTGYNKLQMANKY 108
T ++ G SP + L E H+G L G M +Y
Sbjct: 58 TAELA----GFSPRLYPE--LREIHFGALEGALWETMDPRY 92
>pdb|2P79|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
pdb|2P79|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
Length = 177
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 8 LVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRAQD 67
L ++RHGE+ W + GW D L+ G +A L F+S L RA+
Sbjct: 3 LWLVRHGETLWNREGRLLGWTDLPLTAEGEAQARRLKGALPSL-----PAFSSDLLRARR 57
Query: 68 TVQIILQELGQSPEVTKSWRLNERHYGDLTG 98
T ++ G SP + L E H+G L G
Sbjct: 58 TAELA----GFSPRLYPE--LREIHFGALEG 82
>pdb|2P30|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
Length = 177
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 8 LVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRAQD 67
L ++RHGE+ W + GW D L+ G +A L F+S L RA+
Sbjct: 3 LWLVRHGETLWNREGRLLGWTDLPLTAEGEAQARRLKGALPSL-----PAFSSDLLRARR 57
Query: 68 TVQIILQELGQSPEVTKSWRLNERHYGDLTG 98
T ++ G SP + L E H+G L G
Sbjct: 58 TAELA----GFSPRLYPE--LREIHFGALEG 82
>pdb|2P2Z|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
pdb|2P2Z|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
Length = 177
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 8 LVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRAQD 67
L ++RHGE+ W + GW D L+ G +A L F+S L RA+
Sbjct: 3 LWLVRHGETLWNREGRLLGWTDLPLTAEGEAQARRLKGALPSL-----PAFSSDLLRARR 57
Query: 68 TVQIILQELGQSPEVTKSWRLNERHYGDLTG 98
T ++ G SP + L E H+G L G
Sbjct: 58 TAELA----GFSPRLYPE--LREIHFGALEG 82
>pdb|2ENU|A Chain A, Mutant L121m Structure Of Tthb049 From Thermus
Thermophilus Hb8
pdb|2ENU|B Chain B, Mutant L121m Structure Of Tthb049 From Thermus
Thermophilus Hb8
Length = 177
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 8 LVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRAQD 67
L ++RHGE+ W + GW D L+ G +A L F+S L RA+
Sbjct: 3 LWLVRHGETLWNREGRLLGWTDLPLTAEGEAQARRLKGALPSL-----PAFSSDLLRARR 57
Query: 68 TVQIILQELGQSPEVTKSWRLNERHYGDLTG 98
T ++ G SP + L E H+G L G
Sbjct: 58 TAELA----GFSPRLYPE--LREIHFGALEG 82
>pdb|1V37|A Chain A, Crystal Structure Of Phosphoglycerate Mutase From
Thermus Thermophilus Hb8
pdb|1V37|B Chain B, Crystal Structure Of Phosphoglycerate Mutase From
Thermus Thermophilus Hb8
pdb|1V7Q|A Chain A, Crystal Structure Of Phosphoglycerate Mutase From
Thermus Thermophilus Hb8
pdb|2HIA|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
Length = 177
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 8 LVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRAQD 67
L ++RHGE+ W + GW D L+ G +A L F+S L RA+
Sbjct: 3 LWLVRHGETLWNREGRLLGWTDLPLTAEGEAQARRLKGALPSL-----PAFSSDLLRARR 57
Query: 68 TVQIILQELGQSPEVTKSWRLNERHYGDLTG 98
T ++ G SP + L E H+G L G
Sbjct: 58 TAELA----GFSPRLYPE--LREIHFGALEG 82
>pdb|2OWE|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
Length = 177
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 8 LVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRAQD 67
L ++RHGE+ W + GW D L+ G +A L F+S L RA+
Sbjct: 3 LWLVRHGETLWNREGRLLGWTDLPLTAEGEAQARRLKGALPSL-----PAFSSDLLRARR 57
Query: 68 TVQIILQELGQSPEVTKSWRLNERHYGDLTG 98
T ++ G SP + L E H+G L G
Sbjct: 58 TAELA----GFSPRMYPE--LREIHFGALEG 82
>pdb|2P75|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
pdb|2P75|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
Length = 177
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 13/92 (14%)
Query: 8 LVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFD-HVFTSQLSRAQ 66
L ++RHGE+ W + GW D L+ G +A R +G F+S L RA+
Sbjct: 3 LWLVRHGETLWNREGRLLGWTDLPLTAEGEAQAR------RLKGAMPSLPAFSSDLLRAR 56
Query: 67 DTVQIILQELGQSPEVTKSWRLNERHYGDLTG 98
T ++ G SP + L E H+G L G
Sbjct: 57 RTAELA----GFSPRLYPE--LREIHFGALEG 82
>pdb|2ENW|A Chain A, Mutant Y92h Structure Of Tthb049 From Thermus
Thermophilus Hb8
pdb|2ENW|B Chain B, Mutant Y92h Structure Of Tthb049 From Thermus
Thermophilus Hb8
Length = 177
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 8 LVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRAQD 67
L ++RHGE+ W + GW D L+ G +A L F+S L RA+
Sbjct: 3 LWLVRHGETLWNREGRLLGWTDLPLTAEGEAQARRLKGALPSL-----PAFSSDLLRARR 57
Query: 68 TVQIILQELGQSPEVTKSWRLNERHYGDLTG 98
T ++ G SP + L E H+G L G
Sbjct: 58 TAELA----GFSPRLYPE--LREIHFGALEG 82
>pdb|2EOA|A Chain A, Structural Study Of Project Id Tthb049 From Thermus
Thermophilus Hb8 (W85h)
pdb|2EOA|B Chain B, Structural Study Of Project Id Tthb049 From Thermus
Thermophilus Hb8 (W85h)
Length = 177
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 8 LVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRAQD 67
L ++RHGE+ W + GW D L+ G +A L F+S L RA+
Sbjct: 3 LWLVRHGETLWNREGRLLGWTDLPLTAEGEAQARRLKGALPSL-----PAFSSDLLRARR 57
Query: 68 TVQIILQELGQSPEVTKSWRLNERHYGDLTG 98
T ++ G SP + L E H+G L G
Sbjct: 58 TAELA----GFSPRLYPE--LREIHFGALEG 82
>pdb|2P77|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
pdb|2P77|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
Length = 177
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 8 LVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRAQD 67
L ++RHGE+ W + GW D L+ G +A L F+S L RA+
Sbjct: 3 LWLVRHGETLWNREGRLLGWTDLPLTAEGEAQARRLKGALPSL-----PAFSSDLLRARR 57
Query: 68 TVQIILQELGQSPEVTKSWRLNERHYGDLTG 98
T ++ G SP + L E H+G L G
Sbjct: 58 TAEMA----GFSPRLYPE--LREIHFGALEG 82
>pdb|2EKB|A Chain A, Structural Study Of Project Id Tthb049 From Thermus
Thermophilus Hb8 (L19m)
pdb|2EKB|B Chain B, Structural Study Of Project Id Tthb049 From Thermus
Thermophilus Hb8 (L19m)
Length = 177
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 8 LVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRAQD 67
L ++RHGE+ W + GW D L+ G +A L F+S L RA+
Sbjct: 3 LWLVRHGETLWNREGRMLGWTDLPLTAEGEAQARRLKGALPSL-----PAFSSDLLRARR 57
Query: 68 TVQIILQELGQSPEVTKSWRLNERHYGDLTG 98
T ++ G SP + L E H+G L G
Sbjct: 58 TAELA----GFSPRLYPE--LREIHFGALEG 82
>pdb|2P9Z|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
pdb|2P9Z|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
Length = 177
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 8 LVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRAQD 67
L ++RHGE+ W + GW D L+ G +A L F+S L RA+
Sbjct: 3 LWLVRHGETLWNREGRLLGWTDLPLTAEGEAQARRLKGALPSL-----PAFSSDLLRARR 57
Query: 68 TVQIILQELGQSPEVTKSWRLNERHYGDLTG 98
T ++ G SP + L E H+G L G
Sbjct: 58 TAELA----GFSPRLHPE--LREIHFGALEG 82
>pdb|2P9F|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
pdb|2P9F|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
Length = 177
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 8 LVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRAQD 67
L ++RHGE+ W + GW D L+ G +A L F+S L RA+
Sbjct: 3 LWLVRHGETLWNREGRLLGWTDLPLTAEGEAQARRLKGALPSL-----PAFSSDLLRARR 57
Query: 68 TVQIILQELGQSPEVTKSWRLNERHYGDLTG 98
T ++ G SP + R E H+G L G
Sbjct: 58 TAELA----GFSPRLYPEMR--EIHFGALEG 82
>pdb|2PA0|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
pdb|2PA0|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
Length = 177
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 8 LVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRAQD 67
L ++RHGE+ W + GW D ++ G +A L F+S L RA+
Sbjct: 3 LWLVRHGETLWNREGRLLGWTDLPMTAEGEAQARRLKGALPSL-----PAFSSDLLRARR 57
Query: 68 TVQIILQELGQSPEVTKSWRLNERHYGDLTG 98
T ++ G SP + L E H+G L G
Sbjct: 58 TAELA----GFSPRLYPE--LREIHFGALEG 82
>pdb|2P78|A Chain A, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
pdb|2P78|B Chain B, Crystal Structure Of Tthb049 From Thermus Thermophilus
Hb8
Length = 177
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 8 LVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRAQD 67
L ++RHGE+ W + GW D L+ G +A L F+S L RA+
Sbjct: 3 LWLVRHGETLWNREGRLLGWTDLPLTAEGEAQARRLKGALPSL-----PAFSSDLLRARR 57
Query: 68 TVQIILQELGQSPEVTKSWRLNERHYGDLTG 98
T ++ G SP + L E H+G + G
Sbjct: 58 TAELA----GFSPRLYPE--LREIHFGAMEG 82
>pdb|2EKZ|A Chain A, Structural Study Of Project Id Tthb049 From Thermus
Thermophilus Hb8 (l52m)
pdb|2EKZ|B Chain B, Structural Study Of Project Id Tthb049 From Thermus
Thermophilus Hb8 (l52m)
Length = 177
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 8 LVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRAQD 67
L ++RHGE+ W + GW D L+ G +A L F+S + RA+
Sbjct: 3 LWLVRHGETLWNREGRLLGWTDLPLTAEGEAQARRLKGALPSL-----PAFSSDMLRARR 57
Query: 68 TVQIILQELGQSPEVTKSWRLNERHYGDLTG 98
T ++ G SP + L E H+G L G
Sbjct: 58 TAELA----GFSPRLYPE--LREIHFGALEG 82
>pdb|3BIF|A Chain A, 6-Phosphofructo-2-KinaseFRUCTOSE-2,6-Bisphosphatase Empty
6-Pf-2k Active Site
Length = 468
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 80/208 (38%), Gaps = 42/208 (20%)
Query: 7 TLVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRAQ 66
++ + RHGESE + G D LS G + + Q + D+ + VFTSQ+ R
Sbjct: 250 SIYLCRHGESELNLKGRIGG--DPGLSPRGREFSKHLAQFISDQNIKDLKVFTSQMKRTI 307
Query: 67 DTVQIILQELGQSPEVTKSWRLNERHYGDLTGYNKLQMANKYGLEQVQIWRRSYDVLPPP 126
T + + S + LNE G ++ + Y LE
Sbjct: 308 QTAEAL------SVPYEQFKVLNEIDAGVCEEMTYEEIQDHYPLEFA------------- 348
Query: 127 MTKDHKYYQDIITNPNFKIDGPNEDQFPHTESLKETIMRVLPYWNENIATEIKQGKKVLV 186
+D Y+ ++P ES ++ + R+ P + E+++ + VLV
Sbjct: 349 -LRDQDKYR---------------YRYPKGESYEDLVQRLEP-----VIMELERQENVLV 387
Query: 187 VTHGTSLRGLVKHIEQLSDAEIMKLNIP 214
+ H +R L+ + + E+ L P
Sbjct: 388 ICHQAVMRCLLAYFLDKAAEELPYLKCP 415
>pdb|1BIF|A Chain A, 6-Phosphofructo-2-KinaseFRUCTOSE-2,6-Bisphosphatase
Bifunctional Enzyme Complexed With Atp-G-S And Phosphate
Length = 469
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 80/208 (38%), Gaps = 42/208 (20%)
Query: 7 TLVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRAQ 66
++ + RHGESE + G D LS G + + Q + D+ + VFTSQ+ R
Sbjct: 251 SIYLCRHGESELNLKGRIGG--DPGLSPRGREFSKHLAQFISDQNIKDLKVFTSQMKRTI 308
Query: 67 DTVQIILQELGQSPEVTKSWRLNERHYGDLTGYNKLQMANKYGLEQVQIWRRSYDVLPPP 126
T + + S + LNE G ++ + Y LE
Sbjct: 309 QTAEAL------SVPYEQFKVLNEIDAGVCEEMTYEEIQDHYPLEFA------------- 349
Query: 127 MTKDHKYYQDIITNPNFKIDGPNEDQFPHTESLKETIMRVLPYWNENIATEIKQGKKVLV 186
+D Y+ ++P ES ++ + R+ P + E+++ + VLV
Sbjct: 350 -LRDQDKYR---------------YRYPKGESYEDLVQRLEP-----VIMELERQENVLV 388
Query: 187 VTHGTSLRGLVKHIEQLSDAEIMKLNIP 214
+ H +R L+ + + E+ L P
Sbjct: 389 ICHQAVMRCLLAYFLDKAAEELPYLKCP 416
>pdb|3C7T|A Chain A, Crystal Structure Of The Ecdysone Phosphate Phosphatase,
Eppase, From Bombix Mori In Complex With Tungstate
pdb|3C7T|B Chain B, Crystal Structure Of The Ecdysone Phosphate Phosphatase,
Eppase, From Bombix Mori In Complex With Tungstate
pdb|3C7T|C Chain C, Crystal Structure Of The Ecdysone Phosphate Phosphatase,
Eppase, From Bombix Mori In Complex With Tungstate
pdb|3C7T|D Chain D, Crystal Structure Of The Ecdysone Phosphate Phosphatase,
Eppase, From Bombix Mori In Complex With Tungstate
Length = 263
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/179 (20%), Positives = 63/179 (35%), Gaps = 29/179 (16%)
Query: 29 DSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRAQDTVQIILQELGQSPEVTKSWRL 88
D+ L+ G +A + G+ +R G HV+ S R +T Q L L P V
Sbjct: 57 DTPLTRLGWFQAQLVGEGMRMAGVSIKHVYASPALRCVETAQGFLDGLRADPSV------ 110
Query: 89 NERHYGDLTGYNKLQMANKYGLEQVQIWR--RSYDVLPPPMTKDHKYYQDIITNPNFKID 146
++ + GL + + W + D + P D+ P ++D
Sbjct: 111 --------------KIKVEPGLFEFKNWHMPKGIDFMTPIELCKAGLNVDMTYKPYVEMD 156
Query: 147 GPNEDQFPHTESLKETIMRVLPYWNENIATEIKQGKKVLVVTHGTSLRGLVKHIEQLSD 205
E++ E R + K G V+ + H +L +V + +L D
Sbjct: 157 A-------SAETMDEFFKRGEVAMQAAVNDTEKDGGNVIFIGHAITLDQMVGALHRLRD 208
>pdb|4HBZ|A Chain A, The Structure Of Putative Phosphohistidine Phosphatase
Sixa From Nakamurella Multipartitia
Length = 186
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 7 TLVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRAQ 66
TLV+ RH + R+ +D L+ +G++ A AGQ LR D V S +R +
Sbjct: 21 TLVLXRHAAAGSAVRD-----HDRPLTPDGVRAATAAGQWLRGHLPAVDVVVCSTAARTR 75
Query: 67 DTV 69
T+
Sbjct: 76 QTL 78
>pdb|2BIF|A Chain A, 6-Phosphofructo-2-KinaseFRUCTOSE-2,6-Bisphosphatase H256a
Mutant With F6p In Phosphatase Active Site
pdb|2BIF|B Chain B, 6-Phosphofructo-2-KinaseFRUCTOSE-2,6-Bisphosphatase H256a
Mutant With F6p In Phosphatase Active Site
Length = 469
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 79/208 (37%), Gaps = 42/208 (20%)
Query: 7 TLVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRAQ 66
++ + R GESE + G D LS G + + Q + D+ + VFTSQ+ R
Sbjct: 251 SIYLCRAGESELNLKGRIGG--DPGLSPRGREFSKHLAQFISDQNIKDLKVFTSQMKRTI 308
Query: 67 DTVQIILQELGQSPEVTKSWRLNERHYGDLTGYNKLQMANKYGLEQVQIWRRSYDVLPPP 126
T + + S + LNE G ++ + Y LE
Sbjct: 309 QTAEAL------SVPYEQFKVLNEIDAGVCEEMTYEEIQDHYPLEFA------------- 349
Query: 127 MTKDHKYYQDIITNPNFKIDGPNEDQFPHTESLKETIMRVLPYWNENIATEIKQGKKVLV 186
+D Y+ ++P ES ++ + R+ P + E+++ + VLV
Sbjct: 350 -LRDQDKYR---------------YRYPKGESYEDLVQRLEP-----VIMELERQENVLV 388
Query: 187 VTHGTSLRGLVKHIEQLSDAEIMKLNIP 214
+ H +R L+ + + E+ L P
Sbjct: 389 ICHQAVMRCLLAYFLDKAAEELPYLKCP 416
>pdb|3D4I|A Chain A, Crystal Structure Of The 2h-Phosphatase Domain Of Sts-2
pdb|3D4I|B Chain B, Crystal Structure Of The 2h-Phosphatase Domain Of Sts-2
pdb|3D4I|C Chain C, Crystal Structure Of The 2h-Phosphatase Domain Of Sts-2
pdb|3D4I|D Chain D, Crystal Structure Of The 2h-Phosphatase Domain Of Sts-2
pdb|3D6A|A Chain A, Crystal Structure Of The 2h-Phosphatase Domain Of Sts-2 In
Complex With Tungstate.
pdb|3D6A|B Chain B, Crystal Structure Of The 2h-Phosphatase Domain Of Sts-2 In
Complex With Tungstate.
pdb|3D6A|C Chain C, Crystal Structure Of The 2h-Phosphatase Domain Of Sts-2 In
Complex With Tungstate.
pdb|3D6A|D Chain D, Crystal Structure Of The 2h-Phosphatase Domain Of Sts-2 In
Complex With Tungstate.
pdb|3DB1|A Chain A, Crystal Structure Of The 2h-phosphatase Domain Of Sts-2 In
Complex With Phosphate
pdb|3DB1|B Chain B, Crystal Structure Of The 2h-phosphatase Domain Of Sts-2 In
Complex With Phosphate
pdb|3DB1|C Chain C, Crystal Structure Of The 2h-phosphatase Domain Of Sts-2 In
Complex With Phosphate
pdb|3DB1|D Chain D, Crystal Structure Of The 2h-phosphatase Domain Of Sts-2 In
Complex With Phosphate
Length = 273
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%)
Query: 29 DSKLSENGIKEAHVAGQILRDEGFQFDHVFTSQLSRAQDTVQII 72
D LS GI +A +AG+ L D G + VF S R T + I
Sbjct: 64 DPPLSSCGIFQARLAGEALLDSGVRVTAVFASPALRCVQTAKHI 107
>pdb|4E4W|A Chain A, Structure Of The C-terminal Domain Of The Saccharomyces
Cerevisiae Mutl Alpha (mlh1/pms1) Heterodimer
Length = 285
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 207 EIMKLNIPTAIPFVYKLDANLTPTKPRQFLCDEETVSKAMEKILKVHVGRPWGLQSHVF 265
EI L IP +P V DA+L+ + QF+ +E +S +E +L + R + H+
Sbjct: 208 EIALLYIPDMVPKVDTSDASLSEDEKAQFINRKEHISSLLEHVLFPCIKRRFLAPRHIL 266
>pdb|4FMN|A Chain A, Structure Of The C-terminal Domain Of The Saccharomyces
Cerevisiae Mutl Alpha (mlh1/pms1) Heterodimer Bound To A
Fragment Of Ntg2
pdb|4FMO|A Chain A, Structure Of The C-terminal Domain Of The Saccharomyces
Cerevisiae Mutl Alpha (mlh1/pms1) Heterodimer Bound To A
Fragment Of Exo1
Length = 288
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 207 EIMKLNIPTAIPFVYKLDANLTPTKPRQFLCDEETVSKAMEKILKVHVGRPWGLQSHVF 265
EI L IP +P V DA+L+ + QF+ +E +S +E +L + R + H+
Sbjct: 211 EIALLYIPDMVPKVDTSDASLSEDEKAQFINRKEHISSLLEHVLFPCIKRRFLAPRHIL 269
>pdb|2CWD|A Chain A, Crystal Structure Of Tt1001 Protein From Thermus
Thermophilus Hb8
pdb|2CWD|B Chain B, Crystal Structure Of Tt1001 Protein From Thermus
Thermophilus Hb8
pdb|2CWD|C Chain C, Crystal Structure Of Tt1001 Protein From Thermus
Thermophilus Hb8
pdb|2CWD|D Chain D, Crystal Structure Of Tt1001 Protein From Thermus
Thermophilus Hb8
Length = 161
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 17/81 (20%)
Query: 32 LSENGIKEAHVAGQILRDEGFQFDHVFT----------SQLSRAQDTVQIILQELGQSPE 81
L E G HVA ++ R++ +DH+ + A+ V+++L+ELG
Sbjct: 62 LEEEGAYFPHVARRLTREDVLAYDHILVMDRENLEEVLRRFPEARGKVRLVLEELGGG-- 119
Query: 82 VTKSWRLNERHYGDLTGYNKL 102
+ + +YGDL + ++
Sbjct: 120 -----EVQDPYYGDLEDFREV 135
>pdb|3THO|A Chain A, Crystal Structure Of Mre11:rad50 In Its AtpADP BOUND STATE
Length = 382
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 24/52 (46%)
Query: 99 YNKLQMANKYGLEQVQIWRRSYDVLPPPMTKDHKYYQDIITNPNFKIDGPNE 150
YN L + KY ++ R + + K K Y DI+TN F ID +E
Sbjct: 228 YNNLDLLRKYLFDKSNFSRYFTGRVLEAVLKRTKAYLDILTNGRFDIDFDDE 279
>pdb|3QG5|A Chain A, The Mre11:rad50 Complex Forms An Atp Dependent Molecular
Clamp In Dna Double-Strand Break Repair
pdb|3QG5|B Chain B, The Mre11:rad50 Complex Forms An Atp Dependent Molecular
Clamp In Dna Double-Strand Break Repair
Length = 365
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 24/52 (46%)
Query: 99 YNKLQMANKYGLEQVQIWRRSYDVLPPPMTKDHKYYQDIITNPNFKIDGPNE 150
YN L + KY ++ R + + K K Y DI+TN F ID +E
Sbjct: 211 YNNLDLLRKYLFDKSNFSRYFTGRVLEAVLKRTKAYLDILTNGRFDIDFDDE 262
>pdb|3QF7|A Chain A, The Mre11:rad50 Complex Forms An Atp Dependent Molecular
Clamp In Dna Double-Strand Break Repair
pdb|3QF7|B Chain B, The Mre11:rad50 Complex Forms An Atp Dependent Molecular
Clamp In Dna Double-Strand Break Repair
Length = 365
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 24/52 (46%)
Query: 99 YNKLQMANKYGLEQVQIWRRSYDVLPPPMTKDHKYYQDIITNPNFKIDGPNE 150
YN L + KY ++ R + + K K Y DI+TN F ID +E
Sbjct: 211 YNNLDLLRKYLFDKSNFSRYFTGRVLEAVLKRTKAYLDILTNGRFDIDFDDE 262
>pdb|3DAQ|A Chain A, Crystal Structure Of Dihydrodipicolinate Synthase From
Methicillin- Resistant Staphylococcus Aureus
pdb|3DAQ|B Chain B, Crystal Structure Of Dihydrodipicolinate Synthase From
Methicillin- Resistant Staphylococcus Aureus
pdb|3DAQ|C Chain C, Crystal Structure Of Dihydrodipicolinate Synthase From
Methicillin- Resistant Staphylococcus Aureus
pdb|3DAQ|D Chain D, Crystal Structure Of Dihydrodipicolinate Synthase From
Methicillin- Resistant Staphylococcus Aureus
Length = 292
Score = 28.9 bits (63), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 21/58 (36%)
Query: 161 ETIMRVLPYWNENIATEIKQGKKVLVVTHGTSLRGLVKHIEQLSDA---EIMKLNIPT 215
+ IM + PY+N+ T+ RGLVKH E ++DA ++ N+P+
Sbjct: 99 DAIMLITPYYNK------------------TNQRGLVKHFEAIADAVKLPVVLYNVPS 138
>pdb|3EOZ|A Chain A, Crystal Structure Of Phosphoglycerate Mutase From
Plasmodium Falciparum, Pfd0660w
pdb|3EOZ|B Chain B, Crystal Structure Of Phosphoglycerate Mutase From
Plasmodium Falciparum, Pfd0660w
Length = 214
Score = 28.9 bits (63), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 8 LVMLRHGESEWTKRNLFCGWYDSKLSENGIKEAHVAGQILRD--EGFQFDHVFTSQLSRA 65
++++RHG+ E ++ +L++ G K+A + G+ L+D + ++ S RA
Sbjct: 24 IILVRHGQYERRYKD---DENSKRLTKEGCKQADITGKKLKDILNNKKVSVIYHSDXIRA 80
Query: 66 QDTVQII 72
++T II
Sbjct: 81 KETANII 87
>pdb|3A5F|A Chain A, High-Resolution Structure Of Dhdps From Clostridium
Botulinum In Complex With Pyruvate
pdb|3A5F|B Chain B, High-Resolution Structure Of Dhdps From Clostridium
Botulinum In Complex With Pyruvate
Length = 291
Score = 28.9 bits (63), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 18/84 (21%)
Query: 170 WNENIATEIKQGKKVLVVT---HGTSLRGLVKHIEQLSDA---EIMKLNIPTAIPFVYKL 223
W E+I + +LV+T + T+ +GLVKH + +SDA I+ N+P +
Sbjct: 91 WAESIGVD-----GLLVITPYYNKTTQKGLVKHFKAVSDAVSTPIIIYNVPG------RT 139
Query: 224 DANLTPTKPRQFLCDEETVSKAME 247
N+TP ++ LC+++ + E
Sbjct: 140 GLNITPGTLKE-LCEDKNIVAVXE 162
>pdb|3DI0|A Chain A, Crystal Structure Of Dihydrodipicolinate Synthase From
Staphylococcus Aureus
pdb|3DI0|B Chain B, Crystal Structure Of Dihydrodipicolinate Synthase From
Staphylococcus Aureus
pdb|3DI1|A Chain A, Crystal Structure Of The Staphylococcus Aureus
Dihydrodipicolinate Synthase-pyruvate Complex
pdb|3DI1|B Chain B, Crystal Structure Of The Staphylococcus Aureus
Dihydrodipicolinate Synthase-pyruvate Complex
Length = 295
Score = 28.9 bits (63), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 21/58 (36%)
Query: 161 ETIMRVLPYWNENIATEIKQGKKVLVVTHGTSLRGLVKHIEQLSDA---EIMKLNIPT 215
+ IM + PY+N+ T+ RGLVKH E ++DA ++ N+P+
Sbjct: 100 DAIMLITPYYNK------------------TNQRGLVKHFEAIADAVKLPVVLYNVPS 139
>pdb|3IRD|A Chain A, Structure Of Dihydrodipicolinate Synthase From Clostridium
Botulinum
Length = 291
Score = 28.1 bits (61), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 18/84 (21%)
Query: 170 WNENIATEIKQGKKVLVVT---HGTSLRGLVKHIEQLSDA---EIMKLNIPTAIPFVYKL 223
W E+I + +LV+T + T+ +GLVKH + +SDA I+ N+P +
Sbjct: 91 WAESIGVD-----GLLVITPYYNKTTQKGLVKHFKAVSDAVSTPIIIYNVPG------RT 139
Query: 224 DANLTPTKPRQFLCDEETVSKAME 247
N+TP ++ LC+++ + E
Sbjct: 140 GLNITPGTLKE-LCEDKNIVAVKE 162
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,558,602
Number of Sequences: 62578
Number of extensions: 482134
Number of successful extensions: 1288
Number of sequences better than 100.0: 68
Number of HSP's better than 100.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1149
Number of HSP's gapped (non-prelim): 99
length of query: 365
length of database: 14,973,337
effective HSP length: 100
effective length of query: 265
effective length of database: 8,715,537
effective search space: 2309617305
effective search space used: 2309617305
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)