Query psy7399
Match_columns 107
No_of_seqs 220 out of 1297
Neff 9.1
Searched_HMMs 29240
Date Fri Aug 16 17:13:14 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7399.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7399hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fdi_A N-acetylgalactosamine-6 100.0 1.2E-31 4.1E-36 195.9 10.5 103 1-106 231-334 (502)
2 3ed4_A Arylsulfatase; structur 100.0 6.9E-29 2.4E-33 180.7 10.1 105 1-105 273-380 (502)
3 1fsu_A N-acetylgalactosamine-4 100.0 8.9E-29 3E-33 180.3 9.9 97 1-104 228-325 (492)
4 1hdh_A Arylsulfatase; hydrolas 100.0 3.9E-29 1.3E-33 183.5 8.0 106 1-106 286-425 (536)
5 1auk_A Arylsulfatase A; cerebr 100.0 2.3E-28 7.8E-33 178.2 9.0 100 1-105 232-332 (489)
6 1p49_A Steryl-sulfatase; stero 100.0 6.2E-28 2.1E-32 178.3 10.8 105 1-105 290-396 (562)
7 2vqr_A Putative sulfatase; pho 99.9 1.1E-27 3.6E-32 176.2 9.3 94 1-106 322-417 (543)
8 2qzu_A Putative sulfatase YIDJ 99.9 1.9E-27 6.5E-32 173.1 9.7 94 1-106 282-378 (491)
9 3b5q_A Putative sulfatase YIDJ 99.9 9.6E-28 3.3E-32 174.7 7.8 95 1-106 253-350 (482)
10 2w5q_A Processed glycerol phos 99.9 2.3E-27 7.9E-32 170.3 7.9 98 1-105 227-326 (424)
11 2w8d_A Processed glycerol phos 99.9 8.3E-27 2.8E-31 168.0 8.3 98 1-105 227-327 (436)
12 3lxq_A Uncharacterized protein 99.9 3.9E-24 1.3E-28 154.2 8.3 87 1-105 274-360 (450)
13 2gso_A Phosphodiesterase-nucle 99.9 1.5E-23 5.3E-28 148.7 9.8 105 1-106 187-373 (393)
14 3m7v_A Phosphopentomutase; str 99.9 2.2E-23 7.5E-28 146.6 8.3 82 1-106 315-396 (413)
15 2w5v_A Alkaline phosphatase; p 99.9 9.3E-23 3.2E-27 144.6 6.4 96 1-103 273-375 (375)
16 3igz_B Cofactor-independent ph 99.9 4.3E-21 1.5E-25 140.7 11.5 98 2-107 440-544 (561)
17 4gtw_A Ectonucleotide pyrophos 99.8 1.7E-19 6E-24 138.3 11.3 104 1-105 292-483 (823)
18 1o98_A 2,3-bisphosphoglycerate 99.8 5.8E-19 2E-23 129.1 10.1 87 1-107 417-503 (511)
19 3ot9_A Phosphopentomutase; alk 99.8 5.2E-19 1.8E-23 125.9 6.1 82 1-105 306-388 (399)
20 2i09_A Phosphopentomutase; str 99.7 6.4E-18 2.2E-22 120.3 7.7 81 1-105 313-393 (403)
21 3q3q_A Alkaline phosphatase; h 99.6 2.7E-15 9.3E-20 111.2 8.3 45 59-104 493-537 (565)
22 3nkq_A Ectonucleotide pyrophos 99.6 2.5E-14 8.6E-19 110.0 10.6 105 1-106 292-488 (831)
23 2zkt_A 2,3-bisphosphoglycerate 99.4 2.4E-13 8.2E-18 97.6 7.2 78 2-103 320-408 (412)
24 3a52_A Cold-active alkaline ph 98.4 6.1E-07 2.1E-11 64.2 7.2 31 2-35 242-272 (400)
25 3kd8_A 2,3-bisphosphoglycerate 98.4 1.7E-07 5.7E-12 67.1 2.9 73 2-100 317-399 (399)
26 1zed_A Alkaline phosphatase; p 98.4 6E-07 2.1E-11 65.6 5.6 40 63-105 433-472 (484)
27 1k7h_A Alkaline phosphatase; h 98.3 1.4E-06 4.9E-11 63.5 6.6 38 64-104 434-471 (476)
28 3tg0_A Apase, alkaline phospha 98.3 2.5E-06 8.5E-11 61.8 7.8 95 2-102 342-449 (449)
29 2d1g_A Acid phosphatase; ACPA, 98.2 1.7E-05 5.9E-10 58.2 10.8 96 2-103 356-451 (498)
30 1ei6_A Phosphonoacetate hydrol 97.9 5.4E-06 1.8E-10 58.9 3.1 29 1-37 217-245 (406)
31 2x98_A Alkaline phosphatase; h 97.5 0.00037 1.3E-08 50.4 7.8 38 63-103 393-430 (431)
32 3szy_A Phosphonoacetate hydrol 97.2 0.00028 9.7E-09 50.8 3.7 38 64-102 385-424 (427)
33 2w0y_A APH, alkaline phosphata 96.5 0.0019 6.6E-08 47.1 3.3 38 63-103 436-473 (473)
34 1ei6_A Phosphonoacetate hydrol 96.0 0.0031 1.1E-07 44.6 2.1 31 64-96 372-405 (406)
35 3e2d_A Alkaline phosphatase; c 95.5 0.0077 2.6E-07 44.3 2.6 29 3-34 289-317 (502)
36 3szy_A Phosphonoacetate hydrol 95.3 0.016 5.4E-07 41.7 3.8 13 85-97 404-416 (427)
37 2fdo_B Hypothetical protein AF 71.0 5.6 0.00019 22.0 3.3 23 11-34 12-34 (94)
38 3utn_X Thiosulfate sulfurtrans 63.5 9.1 0.00031 26.4 4.0 28 10-37 99-126 (327)
39 4hdr_B ARSB; transferase; HET: 54.7 6.4 0.00022 27.7 2.0 17 21-37 55-71 (350)
40 1gak_A SP18, fertilization pro 52.1 12 0.0004 22.5 2.5 21 1-21 18-38 (141)
41 3k1t_A Glutamate--cysteine lig 48.5 19 0.00066 25.9 3.6 35 3-37 256-290 (432)
42 4hdr_A ARSA; transferase; HET: 46.6 7 0.00024 27.5 1.1 18 21-38 59-76 (348)
43 3oaa_A ATP synthase subunit al 46.6 26 0.00089 25.9 4.2 25 7-31 203-227 (513)
44 1wx1_A Nicotinate-nucleotide-- 44.6 9.9 0.00034 26.5 1.6 18 21-38 44-61 (335)
45 3a2a_A Voltage-gated hydrogen 42.8 29 0.00098 17.6 2.8 22 2-23 34-55 (58)
46 3bij_A Uncharacterized protein 42.5 34 0.0012 22.8 4.1 25 13-37 64-88 (285)
47 1b4b_A Arginine repressor; cor 40.6 19 0.00066 18.9 2.1 25 8-32 27-56 (71)
48 2zfz_A Arginine repressor; DNA 40.1 19 0.00066 19.3 2.1 26 8-33 35-65 (79)
49 2w0y_A APH, alkaline phosphata 39.4 30 0.001 25.4 3.5 32 2-36 319-350 (473)
50 3dfe_A Putative PII-like signa 38.7 32 0.0011 19.8 3.1 28 6-33 70-97 (111)
51 2qe7_A ATP synthase subunit al 38.7 41 0.0014 24.8 4.2 25 7-31 203-227 (502)
52 3gqb_B V-type ATP synthase bet 38.6 26 0.00089 25.6 3.1 25 7-31 199-223 (464)
53 3vr4_D V-type sodium ATPase su 37.7 27 0.00094 25.5 3.1 25 7-31 196-220 (465)
54 1l5o_A COBT, nicotinate-nucleo 36.7 11 0.00037 26.6 0.9 17 22-38 59-75 (356)
55 3h7i_A Ribonuclease H, RNAse H 36.6 34 0.0012 23.6 3.3 30 4-36 130-159 (305)
56 2p5m_A Arginine repressor; alp 35.7 22 0.00074 19.3 1.9 25 8-32 39-68 (83)
57 1b4u_B LIGA, LIGB, protocatech 34.5 59 0.002 21.9 4.3 17 21-37 49-65 (302)
58 2ck3_A ATP synthase subunit al 33.2 42 0.0014 24.8 3.5 25 7-31 211-235 (510)
59 2r9v_A ATP synthase subunit al 32.4 38 0.0013 25.1 3.2 25 7-31 216-240 (515)
60 3lte_A Response regulator; str 32.1 54 0.0018 17.9 3.3 24 11-34 67-90 (132)
61 1zwx_A SMCL, sphingomyelinase- 31.6 49 0.0017 21.4 3.5 31 7-37 170-200 (301)
62 2c61_A A-type ATP synthase non 31.6 39 0.0013 24.7 3.1 25 7-31 197-221 (469)
63 3bcz_A Protein MEMO1; alpha/be 31.3 68 0.0023 21.5 4.1 28 6-36 162-189 (293)
64 3fiq_A OBP1, RCG36470, odorant 29.8 29 0.001 20.8 2.0 25 6-30 126-150 (157)
65 1nw9_B Caspase 9, apoptosis-re 29.5 44 0.0015 22.3 2.9 27 9-36 73-101 (277)
66 1e5p_A Aphrodisin; lipocalin, 29.5 41 0.0014 19.7 2.5 25 6-30 120-144 (151)
67 3od5_A Caspase-6; caspase doma 29.2 65 0.0022 21.5 3.7 26 10-36 74-101 (278)
68 3i41_A Beta-hemolysin; beta to 29.0 47 0.0016 22.1 3.1 32 6-37 188-219 (317)
69 1mhs_A Proton pump, plasma mem 28.7 65 0.0022 25.5 4.1 24 8-34 539-562 (920)
70 4f6o_A Metacaspase-1; rossmann 27.9 70 0.0024 22.3 3.8 29 9-37 114-142 (350)
71 4af8_A Metacaspase MCA2; hydro 27.8 81 0.0028 22.2 4.1 29 9-37 154-182 (367)
72 3h11_B Caspase-8; cell death, 27.1 78 0.0027 21.1 3.8 27 9-36 76-104 (271)
73 2kc2_A Talin-1, F1; FERM, adhe 26.2 81 0.0028 18.7 3.4 39 68-106 13-52 (128)
74 1fx0_A ATP synthase alpha chai 26.0 40 0.0014 24.9 2.4 25 7-31 204-228 (507)
75 1bj7_A D 2; allergen, lipocali 25.8 51 0.0017 19.4 2.5 25 6-30 125-149 (156)
76 1xwj_B Talin, metavinculin; ce 25.8 32 0.0011 14.4 1.1 15 3-17 11-25 (26)
77 1h7n_A 5-aminolaevulinic acid 25.3 46 0.0016 23.3 2.4 28 4-31 181-208 (342)
78 3oaa_G ATP synthase gamma chai 24.7 32 0.0011 23.2 1.6 13 25-37 76-88 (286)
79 2cz4_A Hypothetical protein TT 24.7 82 0.0028 18.2 3.2 27 6-32 83-109 (119)
80 1fs0_G ATP synthase gamma subu 24.7 31 0.0011 22.3 1.5 13 25-37 59-71 (230)
81 1t5h_X 4-chlorobenzoyl COA lig 24.4 1.4E+02 0.0047 21.1 4.9 33 3-35 33-65 (504)
82 3oee_G ATP synthase subunit ga 24.2 33 0.0011 23.1 1.6 14 24-37 72-85 (278)
83 1b4a_A Arginine repressor; hel 23.7 55 0.0019 19.9 2.4 25 8-32 105-134 (149)
84 3b8c_A ATPase 2, plasma membra 23.7 70 0.0024 25.2 3.4 24 8-34 492-515 (885)
85 1oeg_A Apolipoprotein E; siali 23.6 42 0.0014 14.2 1.3 17 3-19 4-20 (26)
86 4f1h_A Tyrosyl-DNA phosphodies 23.5 99 0.0034 18.6 3.7 27 7-35 129-155 (250)
87 3rix_A Luciferase, luciferin 4 23.2 1.7E+02 0.0059 20.9 5.3 35 3-37 54-88 (550)
88 3i42_A Response regulator rece 23.0 99 0.0034 16.7 3.7 26 11-36 64-89 (127)
89 1xrs_B D-lysine 5,6-aminomutas 22.8 76 0.0026 21.2 3.1 25 7-31 198-222 (262)
90 3lap_A Arginine repressor; arg 22.7 58 0.002 20.3 2.4 26 8-33 126-156 (170)
91 4gr5_A Non-ribosomal peptide s 22.7 1.5E+02 0.005 21.4 4.9 33 3-35 104-136 (570)
92 3h1g_A Chemotaxis protein CHEY 22.5 74 0.0025 17.4 2.7 24 11-34 68-91 (129)
93 2jtq_A Phage shock protein E; 22.4 92 0.0031 16.0 3.7 25 11-35 28-52 (85)
94 4fuq_A Malonyl COA synthetase; 22.4 1.6E+02 0.0054 20.9 4.9 33 3-35 32-64 (503)
95 2ve8_A FTSK, DNA translocase F 22.3 52 0.0018 17.6 1.8 13 9-21 41-53 (73)
96 1zke_A Hypothetical protein HP 22.0 4.2 0.00015 22.2 -2.6 19 2-20 54-72 (83)
97 2l9w_A U4/U6 snRNA-associated- 22.0 1E+02 0.0036 18.0 3.2 32 6-37 35-66 (117)
98 2v7b_A Benzoate-coenzyme A lig 21.9 1.6E+02 0.0054 20.9 4.9 34 3-36 52-85 (529)
99 3nhm_A Response regulator; pro 21.9 94 0.0032 16.9 3.1 24 11-34 64-87 (133)
100 1e0c_A Rhodanese, sulfurtransf 21.8 1.1E+02 0.0037 19.7 3.7 25 11-35 68-92 (271)
101 3ivr_A Putative long-chain-fat 21.6 1.7E+02 0.0057 20.7 4.9 33 3-35 35-67 (509)
102 3rg2_A Enterobactin synthase c 21.6 1.6E+02 0.0053 21.6 4.9 33 3-35 54-86 (617)
103 2d1s_A Luciferase, luciferin 4 21.5 2E+02 0.0067 20.7 5.3 35 3-37 56-90 (548)
104 3gqw_A Fatty acid AMP ligase; 21.2 1.7E+02 0.0057 20.9 4.9 33 3-35 53-85 (576)
105 3c1d_A Protein ORAA, regulator 21.2 63 0.0022 19.5 2.3 21 5-25 45-65 (159)
106 3ni2_A 4-coumarate:COA ligase; 20.7 1.7E+02 0.0059 20.8 4.9 33 3-35 53-85 (536)
107 3sir_A Caspase; hydrolase; 2.6 20.6 81 0.0028 20.8 2.9 26 10-36 72-99 (259)
108 3ar4_A Sarcoplasmic/endoplasmi 20.6 99 0.0034 24.5 3.7 24 9-35 608-631 (995)
109 2v6z_M DNA polymerase epsilon 20.5 82 0.0028 17.9 2.5 22 4-25 64-85 (99)
110 3gl9_A Response regulator; bet 20.5 82 0.0028 17.1 2.6 24 11-34 63-86 (122)
111 1vr8_A GTP binding regulator; 20.5 63 0.0021 19.5 2.0 13 23-35 114-126 (142)
112 3jyf_A 2',3'-cyclic nucleotide 20.4 1.2E+02 0.0041 20.8 3.8 24 8-33 39-62 (339)
113 3r44_A Fatty acyl COA syntheta 20.2 1.8E+02 0.0062 20.6 4.9 33 3-35 47-79 (517)
114 3s26_A Neutrophil gelatinase-a 20.2 99 0.0034 18.9 3.1 25 6-30 148-172 (190)
115 3o22_A Prostaglandin-H2 D-isom 20.1 77 0.0026 18.7 2.5 24 6-29 129-152 (162)
116 3ugs_B Undecaprenyl pyrophosph 20.1 95 0.0033 20.3 3.1 27 8-34 38-64 (225)
No 1
>4fdi_A N-acetylgalactosamine-6-sulfatase; glycoprotein, enzyme replacement therapy, formylg N-linked glycosylation, lysosomal enzyme, hydrolase; HET: NAG CIT; 2.20A {Homo sapiens} PDB: 4fdj_A*
Probab=99.97 E-value=1.2e-31 Score=195.90 Aligned_cols=103 Identities=31% Similarity=0.463 Sum_probs=91.8
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCCCCCCCCcccCCCCCCCCcccccCCccCCCccccEEEEcCCCCC-C
Q psy7399 1 MLKSLDESVGRVIQSLEEEGLLGNSLVVFISDNGGPTVDSLHFHGNTASNWPLRGTKYSFHEGGVRNVAALWSPLLRK-G 79 (107)
Q Consensus 1 ~i~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~ii~~p~~~~-~ 79 (107)
||+++|++||+|+++||+.|++|||+||||||||..... .....+++.++++.|.+.||+++|||+||+||+..+ +
T Consensus 231 ~v~~~D~~vG~il~~L~~~gl~dnTiViftSDhG~~~~~---~~~~~g~~g~~~~~K~~~~E~g~rVPlii~~Pg~~~~g 307 (502)
T 4fdi_A 231 AVREIDDSIGKILELLQDLHVADNTFVFFTSDNGAALIS---APEQGGSNGPFLCGKQTTFEGGMREPALAWWPGHVTAG 307 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCGGGEEEEEEESSCCCTTS---TTTSCCCCTTSSCCTTSSSHHHHBCCEEEECTTTSCTT
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcCceEEEecCCCccccc---cccccCccCCCCCCCcccccCcccCcccccCCCccCCC
Confidence 588999999999999999999999999999999987633 223346777888999999999999999999999765 8
Q ss_pred eeeccceehhhHHHHHHHHhCCCCCCC
Q psy7399 80 QVLENLMHITDWLPTLYFIAGKEKNID 106 (107)
Q Consensus 80 ~~~~~~~~~~Di~pTil~l~gi~~~~~ 106 (107)
.+++++++++||+||||+++|++.|.+
T Consensus 308 ~~~~~~vs~~Di~PTll~laG~~~p~~ 334 (502)
T 4fdi_A 308 QVSHQLGSIMDLFTTSLALAGLTPPSD 334 (502)
T ss_dssp EECCCCEETTHHHHHHHHHHTCCCCSS
T ss_pred ceeecccccccHHHHHHHHhCCCCCCC
Confidence 899999999999999999999998863
No 2
>3ed4_A Arylsulfatase; structural genomics, PSI-2, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, transferase; 1.70A {Escherichia coli}
Probab=99.96 E-value=6.9e-29 Score=180.71 Aligned_cols=105 Identities=30% Similarity=0.399 Sum_probs=89.3
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCCCCCCCCcc--cCCCCCCCCcccccCCccCCCccccEEEEcCC-CC
Q psy7399 1 MLKSLDESVGRVIQSLEEEGLLGNSLVVFISDNGGPTVDSLHF--HGNTASNWPLRGTKYSFHEGGVRNVAALWSPL-LR 77 (107)
Q Consensus 1 ~i~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~vP~ii~~p~-~~ 77 (107)
||+++|++||+|+++|+++|++|||+|||+||||......... ....+.+.++++.|...|++++||||||+||+ +.
T Consensus 273 ~i~~~D~~iG~ll~~L~~~g~~dnTlVIftSDHG~~~~~~~~~~~~~~~g~~~~~~g~k~~~~e~~~rVPlii~~Pg~i~ 352 (502)
T 3ed4_A 273 NISYLDAQVGKVLDKIKAMGEEDNTIVIFTSDNGPVTREARKVYELNLAGETDGLRGRKDNLWEGGIRVPAIIKYGKHLP 352 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCGGGEEEEEEESSCCCCSCCCSGGGTTCCCCCTTCSCCTTCCSHHHHBCCEEEEETTSSC
T ss_pred HHHHHHHHHHHHHHHHHHcCCcCCeEEEEeCCCCCCccccccccccccccCCCcccCCCCCccCcceEeeEEEEeCCcCC
Confidence 4789999999999999999999999999999999765321100 11335667788899999999999999999999 55
Q ss_pred CCeeeccceehhhHHHHHHHHhCCCCCC
Q psy7399 78 KGQVLENLMHITDWLPTLYFIAGKEKNI 105 (107)
Q Consensus 78 ~~~~~~~~~~~~Di~pTil~l~gi~~~~ 105 (107)
++.+++.+++++||+||||+++|++.|.
T Consensus 353 ~g~~~~~~v~~~Di~PTll~laGi~~p~ 380 (502)
T 3ed4_A 353 QGMVSDTPVYGLDWMPTLAKMMNFKLPT 380 (502)
T ss_dssp TTEEECSCEEGGGHHHHHHHHHTCCCCS
T ss_pred CCCEECCeeEEehHHHHHHHHhCCCCCC
Confidence 5888899999999999999999999875
No 3
>1fsu_A N-acetylgalactosamine-4-sulfatase; glycosaminoglycan degradation, hydrolase, glycopr lysosome; HET: ALS NAG; 2.50A {Homo sapiens} SCOP: c.76.1.2
Probab=99.96 E-value=8.9e-29 Score=180.26 Aligned_cols=97 Identities=47% Similarity=0.849 Sum_probs=87.4
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCCCCCCCCcccCCCCCCCCcccccCCccCCCccccEEEEcCCCCC-C
Q psy7399 1 MLKSLDESVGRVIQSLEEEGLLGNSLVVFISDNGGPTVDSLHFHGNTASNWPLRGTKYSFHEGGVRNVAALWSPLLRK-G 79 (107)
Q Consensus 1 ~i~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~ii~~p~~~~-~ 79 (107)
||+++|++||+|+++|+++|+++||+|||+||||..... .+.+.++++.|.+.||+++||||||+||+..+ +
T Consensus 228 ~v~~~D~~vG~ll~~L~~~g~~dnTiviftSDhG~~~~~-------~~~~~~l~g~K~~~~e~~~rVPlii~~P~~~~~g 300 (492)
T 1fsu_A 228 MVSLMDEAVGNVTAALKSSGLWNNTVFIFSTDNGGQTLA-------GGNNWPLRGRKWSLWEGGVRGVGFVASPLLKQKG 300 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCGGGEEEEEEESSCCCGGG-------TCCCTTSSCCTTSSSHHHHBCCEEEECTTCSSCS
T ss_pred HHHHHHHHHHHHHHHHHHcCCccCEEEEEECCCCCCccC-------CCCCCCcCCCCCCccCCCeeeEEEEECCCcCCCC
Confidence 578999999999999999999999999999999987521 23456788889999999999999999999765 7
Q ss_pred eeeccceehhhHHHHHHHHhCCCCC
Q psy7399 80 QVLENLMHITDWLPTLYFIAGKEKN 104 (107)
Q Consensus 80 ~~~~~~~~~~Di~pTil~l~gi~~~ 104 (107)
.+++.+++++||+||||+++|++.|
T Consensus 301 ~~~~~~vs~~Di~PTll~laG~~~p 325 (492)
T 1fsu_A 301 VKNRELIHISDWLPTLVKLARGHTN 325 (492)
T ss_dssp EEECSCEEGGGHHHHHHHHTTCCCT
T ss_pred ceecCceeeeHHHHHHHHHhCCCCC
Confidence 8889999999999999999999987
No 4
>1hdh_A Arylsulfatase; hydrolase, formylglycine hydrate; 1.3A {Pseudomonas aeruginosa} SCOP: c.76.1.2
Probab=99.96 E-value=3.9e-29 Score=183.52 Aligned_cols=106 Identities=31% Similarity=0.449 Sum_probs=87.7
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCCCCC-----CCCcc----------------cCC------------C
Q psy7399 1 MLKSLDESVGRVIQSLEEEGLLGNSLVVFISDNGGPTV-----DSLHF----------------HGN------------T 47 (107)
Q Consensus 1 ~i~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~~~~-----~~~~~----------------~~~------------~ 47 (107)
||+++|++||+|+++||+.|++|||+||||||||.... +.... ... .
T Consensus 286 ~v~~~D~~iG~ll~~L~~~g~~dnTiIiftSDhG~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~G~~~~~~~~g~~w~~ 365 (536)
T 1hdh_A 286 MVERMDWNIGRVVDYLRRQGELDNTFVLFMSDNGAEGALLEAFPKFGPDLLGFLDRHYDNSLENIGRANSYVWYGPRWAQ 365 (536)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCGGGEEEEEEESSSCCCCCGGGCGGGCSSHHHHHHHHCCCSGGGTTSTTCCCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCcCCeEEEEECcCCCccccccccccccccccccccccccccccccccccccccccccccc
Confidence 57899999999999999999999999999999998741 00000 000 0
Q ss_pred CCCCCcccccCCccCCCccccEEEEcCCCCC-CeeeccceehhhHHHHHHHHhCCCCCCC
Q psy7399 48 ASNWPLRGTKYSFHEGGVRNVAALWSPLLRK-GQVLENLMHITDWLPTLYFIAGKEKNID 106 (107)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~vP~ii~~p~~~~-~~~~~~~~~~~Di~pTil~l~gi~~~~~ 106 (107)
+++.|+++.|.+.||+++||||||+||+..+ +.+++.+++++||+||||+++|++.|..
T Consensus 366 ~~~~p~~~~K~~~~E~g~rVPlii~~Pg~~~~g~~~~~~vs~~Di~PTll~laG~~~p~~ 425 (536)
T 1hdh_A 366 AATAPSRLYKAFTTQGGIRVPALVRYPRLSRQGAISHAFATVMDVTPTLLDLAGVRHPGK 425 (536)
T ss_dssp HHHTTSSSCTTSSSHHHHBCCEEEECTTSSCCSSEECCCEEGGGHHHHHHHHHTCCCCCS
T ss_pred ccCCccccccCcccCCCceeeEEEEcCCcCCCCCeECCceeehHHHHHHHHHhCCCCCcc
Confidence 1345788889999999999999999999765 7788999999999999999999998864
No 5
>1auk_A Arylsulfatase A; cerebroside-3-sulfate hydrolysis, lysosomal enzyme, hydrolas; HET: NDG NAG; 2.10A {Homo sapiens} SCOP: c.76.1.2 PDB: 1n2k_A* 1n2l_A* 1e1z_P* 1e2s_P* 1e3c_P* 1e33_P*
Probab=99.95 E-value=2.3e-28 Score=178.21 Aligned_cols=100 Identities=35% Similarity=0.435 Sum_probs=86.0
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCCCCCCCCcccCCCCCCCCcccccCCccCCCccccEEEEcCCCCC-C
Q psy7399 1 MLKSLDESVGRVIQSLEEEGLLGNSLVVFISDNGGPTVDSLHFHGNTASNWPLRGTKYSFHEGGVRNVAALWSPLLRK-G 79 (107)
Q Consensus 1 ~i~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~ii~~p~~~~-~ 79 (107)
||+++|++||+|+++|++.|++|||+|||+||||..... ....+.+.++++.|.+.||+++||||||+||+..+ +
T Consensus 232 ~v~~~D~~vG~ll~~L~~~gl~dnTiViftSDhG~~~~~----~~~~g~~g~~~~~K~~~~e~g~rVPlii~~Pg~i~~g 307 (489)
T 1auk_A 232 SLMELDAAVGTLMTAIGDLGLLEETLVIFTADNGPETMR----MSRGGCSGLLRCGKGTTYEGGVREPALAFWPGHIAPG 307 (489)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCGGGEEEEEEESSCCCGGG----GGGSCCCTTSCCCTTSSSHHHHBCCCEEECTTTSCSE
T ss_pred HHHHHHHHHHHHHHHHHHcCCcCCeEEEEeCCCCccccc----cCCCCcccccCCCccCccCCceeEEEEEecCCCCCCC
Confidence 588999999999999999999999999999999986421 01124556777778899999999999999999554 6
Q ss_pred eeeccceehhhHHHHHHHHhCCCCCC
Q psy7399 80 QVLENLMHITDWLPTLYFIAGKEKNI 105 (107)
Q Consensus 80 ~~~~~~~~~~Di~pTil~l~gi~~~~ 105 (107)
+++.+++++||+|||++++|++.|.
T Consensus 308 -~~~~~vs~~Di~PTll~laG~~~p~ 332 (489)
T 1auk_A 308 -VTHELASSLDLLPTLAALAGAPLPN 332 (489)
T ss_dssp -EECSCEEGGGHHHHHHHHHTCCCCS
T ss_pred -ccCCceeeehHHHHHHHHhCCCCCC
Confidence 8899999999999999999999874
No 6
>1p49_A Steryl-sulfatase; steroid biosynthesis, steroid sulfatase, estrone sulfate, dehydroepiandrosterone sulfate, human placental enzyme; HET: ALS BOG NAG; 2.60A {Homo sapiens} SCOP: c.76.1.2
Probab=99.95 E-value=6.2e-28 Score=178.29 Aligned_cols=105 Identities=28% Similarity=0.361 Sum_probs=88.3
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCCCCCCCCcccC-CCCCCCCcccccCCccCCCccccEEEEcCCC-CC
Q psy7399 1 MLKSLDESVGRVIQSLEEEGLLGNSLVVFISDNGGPTVDSLHFHG-NTASNWPLRGTKYSFHEGGVRNVAALWSPLL-RK 78 (107)
Q Consensus 1 ~i~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~vP~ii~~p~~-~~ 78 (107)
||+++|++||+|+++|++.|+++||+|||+||||........... ..+.+.++++.|.+.|++++||||||+||+. ++
T Consensus 290 ~v~~~D~~vG~il~~L~~~g~~dnTiviftsDhG~~~~~~~~~~~~~g~~~~~~~g~K~~~~e~~~rvP~ii~~P~~~~~ 369 (562)
T 1p49_A 290 AVEEMDWSVGQILNLLDELRLANDTLIYFTSDQGAHVEEVSSKGEIHGGSNGIYKGGKANNWEGGIRVPGILRWPRVIQA 369 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCGGGEEEEEEESSCCCTTCBCSSSCBCSCCCTTCCCCTTSSSHHHHCCCEEEECTTTSCT
T ss_pred HHHHHHHHHHHHHHHHHHcCCccCeEEEEECCCCcccccccccccccCccCCCccCCccCccCCceEEeEEEecCCcCCC
Confidence 478999999999999999999999999999999988632100000 0234567788899999999999999999995 44
Q ss_pred CeeeccceehhhHHHHHHHHhCCCCCC
Q psy7399 79 GQVLENLMHITDWLPTLYFIAGKEKNI 105 (107)
Q Consensus 79 ~~~~~~~~~~~Di~pTil~l~gi~~~~ 105 (107)
+.+++.+++++||+|||++++|++.|.
T Consensus 370 g~~~~~~~~~~Di~PTll~l~G~~~p~ 396 (562)
T 1p49_A 370 GQKIDEPTSNMDIFPTVAKLAGAPLPE 396 (562)
T ss_dssp TCEECSCEEGGGHHHHHHHHHTCCCCS
T ss_pred CceECCceeeeHHHHHHHHHhCCCCCC
Confidence 788899999999999999999999886
No 7
>2vqr_A Putative sulfatase; phosphonate monoester hydrolase, hydrolase, plasmid, formylglycine, phosphodiesterase; 1.42A {Rhizobium leguminosarum BV} PDB: 2w8s_A
Probab=99.95 E-value=1.1e-27 Score=176.20 Aligned_cols=94 Identities=22% Similarity=0.349 Sum_probs=82.7
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCCCCCCCCcccCCCCCCCCcccccCCccCCCccccEEEEcCCCC--C
Q psy7399 1 MLKSLDESVGRVIQSLEEEGLLGNSLVVFISDNGGPTVDSLHFHGNTASNWPLRGTKYSFHEGGVRNVAALWSPLLR--K 78 (107)
Q Consensus 1 ~i~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~ii~~p~~~--~ 78 (107)
||+++|++||+|+++|++.|+++||+|||+||||..... + . ++.|...|++++||||||+||+.. +
T Consensus 322 ~i~~~D~~iG~ll~~L~~~gl~dnTiIiftSDHG~~~g~----~------~--~~~K~~~~e~~~rVPlii~~P~~~~~~ 389 (543)
T 2vqr_A 322 LITEVDDCLGRVFSYLDETGQWDDTLIIFTSDHGEQLGD----H------H--LLGKIGYNDPSFRIPLVIKDAGENARA 389 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCGGGEEEEEEESCCCCTTG----G------G--CCSSCSSCHHHHBCCEEEECSSSCTTT
T ss_pred HHHHHHHHHHHHHHHHHhcCCcCCeEEEEECcCCccccc----c------c--cccCcCcccccceeeEEEEeCCccccC
Confidence 478999999999999999999999999999999987621 1 1 235678899999999999999976 5
Q ss_pred CeeeccceehhhHHHHHHHHhCCCCCCC
Q psy7399 79 GQVLENLMHITDWLPTLYFIAGKEKNID 106 (107)
Q Consensus 79 ~~~~~~~~~~~Di~pTil~l~gi~~~~~ 106 (107)
+.+++.+++++||+||||+++|++.|..
T Consensus 390 g~~~~~~vs~~Di~PTll~laG~~~p~~ 417 (543)
T 2vqr_A 390 GAIESGFTESIDVMPTILDWLGGKIPHA 417 (543)
T ss_dssp TCEEEEEEEGGGHHHHHHHHTTCCCCTT
T ss_pred CccccCccchhhHHHHHHHHhCCCCCCC
Confidence 7788999999999999999999998854
No 8
>2qzu_A Putative sulfatase YIDJ; Q64XZ4_bacfr, arylsulfatase, BFR123, NESG, structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides fragilis}
Probab=99.94 E-value=1.9e-27 Score=173.12 Aligned_cols=94 Identities=32% Similarity=0.358 Sum_probs=82.0
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCCCCCCCCcccCCCCCCCCcccccCCccCCCccccEEEEcCCCCCCe
Q psy7399 1 MLKSLDESVGRVIQSLEEEGLLGNSLVVFISDNGGPTVDSLHFHGNTASNWPLRGTKYSFHEGGVRNVAALWSPLLRKGQ 80 (107)
Q Consensus 1 ~i~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~ii~~p~~~~~~ 80 (107)
||+++|++||+|+++|++.|+++||+|||+||||..... + ..+ .|...|++++||||||+||+..++.
T Consensus 282 ~v~~~D~~iG~ll~~L~~~g~~dnTiIiftSDHG~~~g~----~------g~~--~K~~~~e~~~rVPlii~~Pg~~~g~ 349 (491)
T 2qzu_A 282 CITGVDENVGRIIEALKQNNLFDNTIVVFTSDHGICMGA----H------ENA--GKDIFYEESMRIPMILSWPDQIKPR 349 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSTTEEEEEECSCCCCTTG----G------GCS--SCCSSSHHHHBCCEEEECTTTCCCE
T ss_pred HHHHHHHHHHHHHHHHHHcCCcCCeEEEEECcCCccccc----c------cCC--CCCCccccccccCeEEECCCCCCCc
Confidence 478999999999999999999999999999999987521 1 111 4668899999999999999987788
Q ss_pred eeccceeh-hhHHHHHHHHhCCC--CCCC
Q psy7399 81 VLENLMHI-TDWLPTLYFIAGKE--KNID 106 (107)
Q Consensus 81 ~~~~~~~~-~Di~pTil~l~gi~--~~~~ 106 (107)
+++.++++ +||+||||+++|++ .|..
T Consensus 350 ~~~~~vs~~~Di~PTll~laG~~~~~p~~ 378 (491)
T 2qzu_A 350 KSDPLMIAFADLYPTLLSMMGFSKEIPET 378 (491)
T ss_dssp EEECCCCBGGGHHHHHHHHTTCGGGSCTT
T ss_pred eechhhhhchhHHHHHHHHcCCCCCCCCC
Confidence 88999999 99999999999999 6653
No 9
>3b5q_A Putative sulfatase YIDJ; NP_810509.1, structural genomics, joint center for structural genomics, JCSG; HET: EPE; 2.40A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.94 E-value=9.6e-28 Score=174.66 Aligned_cols=95 Identities=22% Similarity=0.303 Sum_probs=82.7
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCCCCCCCCcccCCCCCCCCcccccCCccCCCccccEEEEcCCCCC-C
Q psy7399 1 MLKSLDESVGRVIQSLEEEGLLGNSLVVFISDNGGPTVDSLHFHGNTASNWPLRGTKYSFHEGGVRNVAALWSPLLRK-G 79 (107)
Q Consensus 1 ~i~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~ii~~p~~~~-~ 79 (107)
||+++|++||+|+++|++.|+++||+|||+||||..... + .+++.+...|++++||||||+||+..+ +
T Consensus 253 ~i~~~D~~vG~ll~~L~~~g~~dnTiVIftSDHG~~~g~----~-------g~~gk~~~~~e~~~rVPlii~~Pg~~~~g 321 (482)
T 3b5q_A 253 YTKMVSKQVDSVLKALYSTPAGRNTIVVIMADHGDGMAS----H-------RMVTKHISFYDEMTNVPFIFAGPGIKQQK 321 (482)
T ss_dssp HHHHHHHHHHHHHHHHTTSTTGGGEEEEEEESCCCCTTG----G-------GCCSCSSCCCHHHHBCCEEEESTTCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHcCCcCCeEEEEECCCCccccc----c-------cccccCCccccccceeeEEEECCCCCCCC
Confidence 578999999999999999999999999999999987621 1 233344488999999999999999876 7
Q ss_pred eeeccceeh--hhHHHHHHHHhCCCCCCC
Q psy7399 80 QVLENLMHI--TDWLPTLYFIAGKEKNID 106 (107)
Q Consensus 80 ~~~~~~~~~--~Di~pTil~l~gi~~~~~ 106 (107)
.+++.++++ +||+||||+++|++.|..
T Consensus 322 ~~~~~~vs~~~~Di~PTll~laG~~~p~~ 350 (482)
T 3b5q_A 322 KPVDHLLTQPTLDLLPTLCDLAGIAVPAE 350 (482)
T ss_dssp SCBCSSCBCHHHHHHHHHHHHHTCCCCTT
T ss_pred cEeccccccccccHHHHHHHHhCCCCCCC
Confidence 788999999 999999999999998864
No 10
>2w5q_A Processed glycerol phosphate lipoteichoic acid synthase; transmembrane, cell WALL biogenesis/degradation, LTAS, membrane, secreted; 1.20A {Staphylococcus aureus} PDB: 2w5s_A* 2w5t_A* 2w5r_A*
Probab=99.94 E-value=2.3e-27 Score=170.31 Aligned_cols=98 Identities=23% Similarity=0.304 Sum_probs=82.7
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCCCCCCCCcccCCCCCCCCcccccCCccCCC--ccccEEEEcCCCCC
Q psy7399 1 MLKSLDESVGRVIQSLEEEGLLGNSLVVFISDNGGPTVDSLHFHGNTASNWPLRGTKYSFHEGG--VRNVAALWSPLLRK 78 (107)
Q Consensus 1 ~i~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~vP~ii~~p~~~~ 78 (107)
||+++|++||+|+++|++.|+++||+|||+||||..... + .....++++.|.+.|+++ +||||||+||+ .+
T Consensus 227 ~i~~~D~~iG~ll~~Lk~~g~~dnTiIVf~sDHG~~~~~----~--~~~~~~~~g~k~~~~e~~~~~rVPlii~~Pg-~~ 299 (424)
T 2w5q_A 227 TARYLDEALEEYINDLKKKGLYDNSVIMIYGDHYGISEN----H--NNAMEKLLGEKITPAKFTDLNRTGFWIKIPG-KS 299 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSTTSEEEEEECSCSSCGG----G--HHHHHHHHTSCCCHHHHHHTTBCCEEEECTT-CC
T ss_pred HHHHHHHHHHHHHHHHHhcCCcCCeEEEEECCCCccccc----c--hhhhhhhhCCCCCccccccccceeEEEEeCC-CC
Confidence 478999999999999999999999999999999976521 0 011123455677888887 99999999999 66
Q ss_pred CeeeccceehhhHHHHHHHHhCCCCCC
Q psy7399 79 GQVLENLMHITDWLPTLYFIAGKEKNI 105 (107)
Q Consensus 79 ~~~~~~~~~~~Di~pTil~l~gi~~~~ 105 (107)
+.+++.+++++||+||||+++|++.|.
T Consensus 300 g~~~~~~~s~~Di~PTll~l~Gi~~~~ 326 (424)
T 2w5q_A 300 GGINNEYAGQVDVMPTILHLAGIDTKN 326 (424)
T ss_dssp CEECCCCEEGGGHHHHHHHHHTCCCTT
T ss_pred CceecccchHHHHHHHHHHHcCCCCCc
Confidence 888899999999999999999999875
No 11
>2w8d_A Processed glycerol phosphate lipoteichoic acid SY; transferase, phosphatase, cell membrane, transmembrane, LTA, membrane, secreted, cell WALL; HET: TPO PG4; 2.35A {Bacillus subtilis}
Probab=99.94 E-value=8.3e-27 Score=168.00 Aligned_cols=98 Identities=19% Similarity=0.276 Sum_probs=81.9
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCCCCCCCCcccCCCCCCCCccccc-CCccCCC--ccccEEEEcCCCC
Q psy7399 1 MLKSLDESVGRVIQSLEEEGLLGNSLVVFISDNGGPTVDSLHFHGNTASNWPLRGTK-YSFHEGG--VRNVAALWSPLLR 77 (107)
Q Consensus 1 ~i~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~vP~ii~~p~~~ 77 (107)
+|+++|++||+|+++|+++|+++||+|||+||||..... + .+...++++.+ .+.|+++ +||||||+||+ .
T Consensus 227 ~v~~~D~~iG~ll~~Lk~~gl~dnTiIv~tsDHG~~~~~----~--~~~~~~~~g~k~~~~~e~~~~~rVPlii~~Pg-~ 299 (436)
T 2w8d_A 227 SAHYLDQSIEQFFNDLKKDGLYDKSIIVMYGDHYGISEN----H--NKAMAKVLGKDEITDYDNAQLQRVPLFIHAAG-V 299 (436)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSTTEEEEEEECSCSSCGG----G--HHHHHHHTTCSCCCHHHHHHTTBCCEEEEETT-S
T ss_pred HHHHHHHHHHHHHHHHHhcCCcCCeEEEEECCCCccccc----c--hhhHHHhhCCCCCCcccccccceEeEEEEeCC-C
Confidence 478999999999999999999999999999999976521 0 00111345554 6788888 89999999999 6
Q ss_pred CCeeeccceehhhHHHHHHHHhCCCCCC
Q psy7399 78 KGQVLENLMHITDWLPTLYFIAGKEKNI 105 (107)
Q Consensus 78 ~~~~~~~~~~~~Di~pTil~l~gi~~~~ 105 (107)
++.+++.+++++||+||||+++|++.|.
T Consensus 300 ~g~~~~~~~s~~Di~PTll~l~Gi~~p~ 327 (436)
T 2w8d_A 300 KGEKVHKYAGDVDVAPTILHLLGVDTKD 327 (436)
T ss_dssp CCCEECCCEEGGGHHHHHHHHTTCCCTT
T ss_pred CCceeccchhHHhHHHHHHHHcCCCCCc
Confidence 6788899999999999999999999875
No 12
>3lxq_A Uncharacterized protein VP1736; alkaline, phosphatase, MDOB, sulfatase, PSI, MCSG, structural genomics; 1.95A {Vibrio parahaemolyticus}
Probab=99.90 E-value=3.9e-24 Score=154.20 Aligned_cols=87 Identities=13% Similarity=0.170 Sum_probs=75.4
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCCCCCCCCcccCCCCCCCCcccccCCccCCCccccEEEEcCCCCCCe
Q psy7399 1 MLKSLDESVGRVIQSLEEEGLLGNSLVVFISDNGGPTVDSLHFHGNTASNWPLRGTKYSFHEGGVRNVAALWSPLLRKGQ 80 (107)
Q Consensus 1 ~i~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~ii~~p~~~~~~ 80 (107)
+++++|++||+|+++|++.|+++||+|||+||||....+ +...+++++|||+||+||++. +.
T Consensus 274 ~v~~~D~~ig~~l~~L~~~g~~~nTlvI~tsDHG~~~~~-----------------~~~~~~~~~~vP~ii~~p~~~-~~ 335 (450)
T 3lxq_A 274 AVKYSDYALGTFFDKAKKSSYWDDTIFIVIADHDARVFG-----------------ANLVPVKHFHIPALIIGKDIQ-PR 335 (450)
T ss_dssp HHHHHHHHHHHHHHHHTTSSSGGGEEEEEEESCCSCCCS-----------------CCSCCGGGGEECEEEECTTCC-CE
T ss_pred HHHHHHHHHHHHHHHHHhCCCcCCeEEEEECCCCcccCC-----------------CCCCccccceEeEEEECCCCC-Cc
Confidence 378999999999999999999999999999999986521 223455678999999999976 46
Q ss_pred eeccceehhhHHHHHHHHhCCCCCC
Q psy7399 81 VLENLMHITDWLPTLYFIAGKEKNI 105 (107)
Q Consensus 81 ~~~~~~~~~Di~pTil~l~gi~~~~ 105 (107)
+++.+++++||+||||+++|++.|.
T Consensus 336 ~~~~~~s~~Di~PTll~l~G~~~~~ 360 (450)
T 3lxq_A 336 KDDRIANNIDMPPTLLSLIGVDAKT 360 (450)
T ss_dssp EECCCEEGGGHHHHHHHHTTCCEEE
T ss_pred eeCCccchhhHHHHHHHHhCCCCCC
Confidence 7899999999999999999998764
No 13
>2gso_A Phosphodiesterase-nucleotide pyrophosphatase; alpha beta, NPP, hydrolase; 1.30A {Xanthomonas axonopodis PV} PDB: 2gsn_A 2gsu_A* 2rh6_A*
Probab=99.90 E-value=1.5e-23 Score=148.73 Aligned_cols=105 Identities=20% Similarity=0.294 Sum_probs=80.2
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCCCCCCCCcc-----------------c-------------------
Q psy7399 1 MLKSLDESVGRVIQSLEEEGLLGNSLVVFISDNGGPTVDSLHF-----------------H------------------- 44 (107)
Q Consensus 1 ~i~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~~~~~~~~~-----------------~------------------- 44 (107)
+++++|++||+|+++|++.|+++||+||||||||.......+. .
T Consensus 187 ~i~~~D~~ig~ll~~L~~~g~~~nT~vi~tSDHG~~~~~~~~~i~l~~~l~~~~~~~~~~g~~~~i~~~~~~~~~~~~~l 266 (393)
T 2gso_A 187 AVRAVDAAIGRLLAGMQRDGTRARTNIIVVSDHGMAEVAPGHAISVEDIAPPQIATAITDGQVIGFEPLPGQQAAAEASV 266 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCGGGEEEEEECSCCCEEECTTCEEEGGGTSCTTTEEESCCBSEEEEEECTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCeEEEEEcCCCCCCCCCCcEEeHHHccCHHHeEEEcCCCeEEEEeCCcchHHHHHHH
Confidence 4789999999999999999999999999999999865320000 0
Q ss_pred ------------------CCCCC-------------CC--------------CcccccCC-ccCCCccccEEEEcCCCCC
Q psy7399 45 ------------------GNTAS-------------NW--------------PLRGTKYS-FHEGGVRNVAALWSPLLRK 78 (107)
Q Consensus 45 ------------------~~~~~-------------~~--------------~~~~~~~~-~~~~~~~vP~ii~~p~~~~ 78 (107)
...+. ++ ...+.++. .+++++|+|||++||++++
T Consensus 267 ~~~~~~~~v~~~~~l~~~~~~~~~~r~gdl~v~~~~g~~~~~~~~~~~~~~~~~~g~HG~d~~~~~~~vp~i~~gp~i~~ 346 (393)
T 2gso_A 267 LGAHDHYDCWRKAELPARWQYGSHPRIPSLVCQMHEGWDALFPDKLAKRAQRGTRGSHGYDPALPSMRAVFLAQGPDLAQ 346 (393)
T ss_dssp SEECSSEEEEEGGGSCGGGCCSCSTTSCSEEEEECTTCEEECHHHHHHSCTTSCEEECCSCTTSGGGCBCEEEESTTBCS
T ss_pred hcCCCCeEEEEcccCchhhcCCCCCCCCCEEEEeeCCEEEEeccccccccCCCCCcCCCCCCCChhhhccceeECCCccC
Confidence 00000 00 11245554 7888999999999999887
Q ss_pred CeeeccceehhhHHHHHHHHhCCCCCCC
Q psy7399 79 GQVLENLMHITDWLPTLYFIAGKEKNID 106 (107)
Q Consensus 79 ~~~~~~~~~~~Di~pTil~l~gi~~~~~ 106 (107)
+.+. .+++++||+||||+++|++.|++
T Consensus 347 g~~~-~~~~~~Di~PTi~~llgi~~p~~ 373 (393)
T 2gso_A 347 GKTL-PGFDNVDVYALMSRLLGIPAAPN 373 (393)
T ss_dssp SEEE-CCEEGGGHHHHHHHHHTCCCCSC
T ss_pred CCcC-CCcchhhHHHHHHHHhCCCCCCC
Confidence 7665 59999999999999999998753
No 14
>3m7v_A Phosphopentomutase; structural genomics, nysgrc, cytoplasm, isomerase, manganese binding, PSI-2, protein structure initiative; 2.00A {Streptococcus mutans}
Probab=99.89 E-value=2.2e-23 Score=146.59 Aligned_cols=82 Identities=17% Similarity=0.199 Sum_probs=67.6
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCCCCCCCCcccCCCCCCCCcccccCCccCCCccccEEEEcCCCCCCe
Q psy7399 1 MLKSLDESVGRVIQSLEEEGLLGNSLVVFISDNGGPTVDSLHFHGNTASNWPLRGTKYSFHEGGVRNVAALWSPLLRKGQ 80 (107)
Q Consensus 1 ~i~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~ii~~p~~~~~~ 80 (107)
||+++|++||+|+++|+ |||+||||||||..... ...++.+.|||||++||+++ +.
T Consensus 315 ~i~~~D~~vg~~l~~L~-----entliiftsDnG~~~~~------------------~~~~~~~~~vp~~~~~p~~~-~~ 370 (413)
T 3m7v_A 315 CLHEFDERLPEIIAAMK-----VDDLLLITADHGNDPTY------------------AGTDHTREYVPLLAYSPSFT-GN 370 (413)
T ss_dssp HHHHHHHHHHHHHHTCC-----TTEEEEEECSSBCCTTS------------------SSSSCBCBCEEEEEECTTCS-CC
T ss_pred HHHHHHhHHHHHHHhcC-----CCCEEEEEccCCCCCCC------------------CCCCCCCeeEEEEEEECCCC-CC
Confidence 58899999999999876 69999999999976521 01123456999999999975 45
Q ss_pred eeccceehhhHHHHHHHHhCCCCCCC
Q psy7399 81 VLENLMHITDWLPTLYFIAGKEKNID 106 (107)
Q Consensus 81 ~~~~~~~~~Di~pTil~l~gi~~~~~ 106 (107)
.+...++++||+||||+++|++.|.+
T Consensus 371 ~~~~~~~~~d~~pt~~~~~g~~~p~~ 396 (413)
T 3m7v_A 371 GVLPVGHYADISATIADNFGVDTAMI 396 (413)
T ss_dssp EECCCEETTHHHHHHHHHHTCCCCSS
T ss_pred CcCCCcEEehHHHHHHHHcCCCcCCC
Confidence 66889999999999999999998853
No 15
>2w5v_A Alkaline phosphatase; psychrophiles, cold adaptation, hydrolase; HET: SEP; 1.78A {Antarctic bacterium TAB5} PDB: 2w5w_A* 2w5x_A* 2iuc_A 2iuc_B
Probab=99.87 E-value=9.3e-23 Score=144.57 Aligned_cols=96 Identities=13% Similarity=0.160 Sum_probs=72.4
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCC--CCCCCCCcccCCCCCCCCccccc-----CCccCCCccccEEEEc
Q psy7399 1 MLKSLDESVGRVIQSLEEEGLLGNSLVVFISDNG--GPTVDSLHFHGNTASNWPLRGTK-----YSFHEGGVRNVAALWS 73 (107)
Q Consensus 1 ~i~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG--~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~vP~ii~~ 73 (107)
||+++|++||+++++|++.| ||+|||||||| ....+... ......+.++++.| ...|++++|||+|++|
T Consensus 273 ~v~~~D~~vG~il~~L~~~g---nTlviftsDhG~Gg~~~g~~~-~~~~~~~~~~~~~K~~~~~~~~~e~g~rVP~iv~~ 348 (375)
T 2w5v_A 273 EINDFDDAIGTALAFAKKDG---NTLVIVTSDHETGGFTLAAKK-NKREDGSEYSDYTEIGPTFSTGGHSATLIPVFAYG 348 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHS---SEEEEEECSCEETTCBCBEEE-EECSSSCEEEEEEEECCBCSCSSEECCCEEEEEES
T ss_pred HHHHHHHHHHHHHHHHhhCC---CEEEEEECcCCCCCcccCCCC-cccccCcccccCCccccCcCCCCCCCcEeEEEEEC
Confidence 57899999999999999998 99999999994 32211000 00011223345555 4569999999999999
Q ss_pred CCCCCCeeeccceehhhHHHHHHHHhCCCC
Q psy7399 74 PLLRKGQVLENLMHITDWLPTLYFIAGKEK 103 (107)
Q Consensus 74 p~~~~~~~~~~~~~~~Di~pTil~l~gi~~ 103 (107)
|+. ...+.+++++||+|||++++|++.
T Consensus 349 Pg~---~~~~~~v~~~Di~pTll~~agi~~ 375 (375)
T 2w5v_A 349 PGS---EEFIGIYENNEIFHKILKVTKWNQ 375 (375)
T ss_dssp TTG---GGGCEEEETTHHHHHHHHHHCCCC
T ss_pred CCc---cccCCceehhHHHHHHHHHhCCCC
Confidence 995 345778999999999999999864
No 16
>3igz_B Cofactor-independent phosphoglycerate mutase; glycolysis, cobalt, isomerase; HET: 3PG 2PG; 1.90A {Leishmania mexicana} PDB: 3igy_B* 3nvl_A
Probab=99.86 E-value=4.3e-21 Score=140.71 Aligned_cols=98 Identities=11% Similarity=0.114 Sum_probs=77.1
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCCCCCCCCcccCCCCCCCCcccccCCccC----CCccccEEEEcCCCC
Q psy7399 2 LKSLDESVGRVIQSLEEEGLLGNSLVVFISDNGGPTVDSLHFHGNTASNWPLRGTKYSFHE----GGVRNVAALWSPLLR 77 (107)
Q Consensus 2 i~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~vP~ii~~p~~~ 77 (107)
|+++|++||+|+++|++.| |+||||||||....-. .+ +..+.++++.|+..|+ +..+||||++||+..
T Consensus 440 IE~vD~~LGrIl~aL~e~G----tiIIITADHGn~e~m~--d~--~~~G~plrg~KG~~~e~t~HT~~~VPlII~gPg~~ 511 (561)
T 3igz_B 440 VEAVDESLAKLKDAVDSVN----GVYIVTADHGNSDDMA--QR--DKKGKPMKDGNGNVLPLTSHTLSPVPVFIGGAGLD 511 (561)
T ss_dssp HHHHHHHHHHHHHHHHHTT----CEEEEECSSBSTTCCB--CB--CTTCCBCBCTTSCBCBCCSCBCCCEEEEEECTTSC
T ss_pred HHHHHHHHHHHHHHHHhCC----CEEEEEcCCCCchhcc--cc--cccCCccccccccccccccccCceecEEEEcCCCC
Confidence 7899999999999999976 8999999999874210 00 0123566777776555 778999999999987
Q ss_pred CCeeec---cceehhhHHHHHHHHhCCCCCCCC
Q psy7399 78 KGQVLE---NLMHITDWLPTLYFIAGKEKNIDS 107 (107)
Q Consensus 78 ~~~~~~---~~~~~~Di~pTil~l~gi~~~~~~ 107 (107)
++.... ..+++.||+||||+++|++.|.+|
T Consensus 512 ~g~~l~~~l~~~sL~DIAPTILdL~Gl~~P~em 544 (561)
T 3igz_B 512 PRVAMRTDLPAAGLANVTATFINLLGFEAPEDY 544 (561)
T ss_dssp TTEEECSSCTTCBTHHHHHHHHHHHTBCCCTTS
T ss_pred CCceeccccCceeehHHHHHHHHHhCCCCCcCc
Confidence 665543 357899999999999999999876
No 17
>4gtw_A Ectonucleotide pyrophosphatase/phosphodiesterase member 2, alkaline phosphodiesterase...; bone mineralization, hydrolase; HET: NAG BMA MAN AMP; 2.70A {Mus musculus} PDB: 4gtx_A* 4gty_A* 4gtz_A* 4b56_A*
Probab=99.81 E-value=1.7e-19 Score=138.28 Aligned_cols=104 Identities=16% Similarity=0.205 Sum_probs=74.6
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCCCCCCCCcc---------------------------c-C-------
Q psy7399 1 MLKSLDESVGRVIQSLEEEGLLGNSLVVFISDNGGPTVDSLHF---------------------------H-G------- 45 (107)
Q Consensus 1 ~i~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~~~~~~~~~---------------------------~-~------- 45 (107)
+++++|++||+|+++|+++|+++||+|||+||||+......+. . .
T Consensus 292 ~i~~vD~~IG~ll~~L~~~gl~dnT~VI~tSDHGm~~~~~~~~I~L~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 371 (823)
T 4gtw_A 292 ALQKVDRLVGMLMDGLKDLGLDKCLNLILISDHGMEQGSCKKYVYLNKYLGDVNNVKVVYGPAARLRPTDVPETYYSFNY 371 (823)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTSCEEEEECSCCCEECCSSSEEETHHHHCSCCSEEEECBSSCEEEESSTTTSTTTSCH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCeEEEEEcCCCCCcCCccceEcHHHhhchhcceeeecccceeeccccchhhhhhhHH
Confidence 3689999999999999999999999999999999743110000 0 0
Q ss_pred ----------------------------CCC-------------CCC-----------CcccccC-CccCCCccccEEEE
Q psy7399 46 ----------------------------NTA-------------SNW-----------PLRGTKY-SFHEGGVRNVAALW 72 (107)
Q Consensus 46 ----------------------------~~~-------------~~~-----------~~~~~~~-~~~~~~~~vP~ii~ 72 (107)
... .++ ...|.++ ..++..+|+|||++
T Consensus 372 ~~l~~~l~~~~~~~~~~vy~k~~lp~rlh~~~~~RigdIvl~~d~G~~~~~~~~~~~~~~~G~HGy~~~~~dmrvpfIa~ 451 (823)
T 4gtw_A 372 EALAKNLSCREPNQHFRPYLKPFLPKRLHFAKSDRIEPLTFYLDPQWQLALNPSERKYCGSGFHGSDNLFSNMQALFIGY 451 (823)
T ss_dssp HHHHHHHSSCSTTCSEEEEEGGGSCGGGCCCSCSSSCSEEEEECTTCEEESSTTTSSCSSSEECCSCTTBGGGCBCEEEE
T ss_pred HHHHHHHhhhccccceeEEeHHHHHHHhcccCCCCCcCEEEEEcCCeeecccCCCCccCCCcCcCCCCCcccceeEEEEE
Confidence 000 000 0011122 23455689999999
Q ss_pred cCCCCCCeeeccceehhhHHHHHHHHhCCCCCC
Q psy7399 73 SPLLRKGQVLENLMHITDWLPTLYFIAGKEKNI 105 (107)
Q Consensus 73 ~p~~~~~~~~~~~~~~~Di~pTil~l~gi~~~~ 105 (107)
||+++++.++ ++++++||+|||++||||++++
T Consensus 452 GPgik~G~~~-~~v~nVDIaPTl~~LLGI~P~P 483 (823)
T 4gtw_A 452 GPAFKHGAEV-DSFENIEVYNLMCDLLGLIPAP 483 (823)
T ss_dssp STTBCSSEEE-CCEEGGGHHHHHHHHHTCCCCS
T ss_pred eCCcCCCCCC-CCeeEEEHHHHHHHHhCCCCCC
Confidence 9999988765 4689999999999999998643
No 18
>1o98_A 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; isomerase, alpha/beta-type structure; HET: 2PG; 1.4A {Bacillus stearothermophilus} SCOP: c.105.1.1 c.76.1.3 PDB: 1ejj_A* 1eqj_A* 1o99_A* 2ify_A
Probab=99.79 E-value=5.8e-19 Score=129.10 Aligned_cols=87 Identities=15% Similarity=0.230 Sum_probs=69.6
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCCCCCCCCcccCCCCCCCCcccccCCccCCCccccEEEEcCCCCCCe
Q psy7399 1 MLKSLDESVGRVIQSLEEEGLLGNSLVVFISDNGGPTVDSLHFHGNTASNWPLRGTKYSFHEGGVRNVAALWSPLLRKGQ 80 (107)
Q Consensus 1 ~i~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~ii~~p~~~~~~ 80 (107)
+++++|++||+++++|++.| |+||||||||..... .. + ..+...++++.+||+|++||+++.
T Consensus 417 aIe~vD~~lGrll~~Lk~~g----TlIIiTSDHG~~e~m--------~d--~--~Gk~~t~ht~~~VPlIi~~pgi~~-- 478 (511)
T 1o98_A 417 AVEAVDECLGKVVDAILAKG----GIAIITADHGNADEV--------LT--P--DGKPQTAHTTNPVPVIVTKKGIKL-- 478 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHTT----CEEEEECSSBSTTCC--------BC--T--TSCBCCSCBCCCEEEEECCTTCCB--
T ss_pred HHHHHHHHHHHHHHHHHHCC----CEEEEECCCCccccc--------cC--C--CCCcccCCCCeEEEEEEEECCccc--
Confidence 47899999999999999985 999999999986411 00 0 124456778899999999999642
Q ss_pred eeccceehhhHHHHHHHHhCCCCCCCC
Q psy7399 81 VLENLMHITDWLPTLYFIAGKEKNIDS 107 (107)
Q Consensus 81 ~~~~~~~~~Di~pTil~l~gi~~~~~~ 107 (107)
.+.++++||+||||+++|++.|.+|
T Consensus 479 --~~~~sl~DIaPTIL~llGi~~P~~m 503 (511)
T 1o98_A 479 --RDGGILGDLAPTMLDLLGLPQPKEM 503 (511)
T ss_dssp --CSSEEGGGHHHHHHHHHTCCCCTTC
T ss_pred --CCCeEeHHHHHHHHHHhCcCCCCCC
Confidence 2468999999999999999998754
No 19
>3ot9_A Phosphopentomutase; alkaline phosphatase like core domain, R phosphate, ribose-1-phosphate, glucose-1,6-bisphosphate, PH transfer, isomerase; HET: TPO G16; 1.75A {Bacillus cereus} PDB: 3m8y_A* 3m8w_A* 3m8z_A* 3twz_A* 3tx0_A 3uo0_A* 3un2_A 3un3_A* 3un5_A 3uny_A
Probab=99.76 E-value=5.2e-19 Score=125.93 Aligned_cols=82 Identities=20% Similarity=0.222 Sum_probs=64.6
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCCCCCCCCcccCCCCCCCCcccccCCccCCCccccEEEEcCCCCCCe
Q psy7399 1 MLKSLDESVGRVIQSLEEEGLLGNSLVVFISDNGGPTVDSLHFHGNTASNWPLRGTKYSFHEGGVRNVAALWSPLLRKGQ 80 (107)
Q Consensus 1 ~i~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~ii~~p~~~~~~ 80 (107)
+++++|++||+++++|++. .+||||||||.... ++ .+.. ...+||||++||+.+++.
T Consensus 306 aIe~vD~~IGrIL~~L~e~-----~lVIiTSDHG~dp~------------~~---~t~h---t~~~VPlIi~~Pgi~~g~ 362 (399)
T 3ot9_A 306 ALQEYDARLPEVFAKLKED-----DLLLITADHGNDPI------------HP---GTDH---TREYVPLLAYSPSMKEGG 362 (399)
T ss_dssp HHHHHHTTHHHHHHHCCTT-----EEEEEECSSBCCSS------------SS---SSSC---BCBCEEEEEECTTCTTCC
T ss_pred HHHHHHHHHHHHHHHhhcC-----CeEEEEcCCCCCCC------------CC---CcCC---CCCeEeEEEEECCCCCCc
Confidence 3789999999999999863 39999999998431 01 1111 224999999999987655
Q ss_pred -eeccceehhhHHHHHHHHhCCCCCC
Q psy7399 81 -VLENLMHITDWLPTLYFIAGKEKNI 105 (107)
Q Consensus 81 -~~~~~~~~~Di~pTil~l~gi~~~~ 105 (107)
..+..+++.||+||||+++|++.|.
T Consensus 363 ~~~~~~~sl~DIaPTil~llGi~~P~ 388 (399)
T 3ot9_A 363 QELPLRQTFADIGATVAENFGVKMPE 388 (399)
T ss_dssp CBCCCBSSTHHHHHHHHHHHTCCCCS
T ss_pred eeECCCCEEecHHHHHHHHhCcCCCC
Confidence 6677889999999999999999875
No 20
>2i09_A Phosphopentomutase; structural genomics, target T1865, NYSGXRC, PSI, protein structure initiative; 2.00A {Streptococcus mutans} PDB: 3m7v_A
Probab=99.73 E-value=6.4e-18 Score=120.31 Aligned_cols=81 Identities=19% Similarity=0.196 Sum_probs=63.0
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCCCCCCCCcccCCCCCCCCcccccCCccCCCccccEEEEcCCCCCCe
Q psy7399 1 MLKSLDESVGRVIQSLEEEGLLGNSLVVFISDNGGPTVDSLHFHGNTASNWPLRGTKYSFHEGGVRNVAALWSPLLRKGQ 80 (107)
Q Consensus 1 ~i~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~ii~~p~~~~~~ 80 (107)
+|+++|++||+++++|++ ||+||||||||..... + .+.+ ...+||||++||+..++.
T Consensus 313 aIe~vD~~LG~Il~aL~~-----~tllIITADHGndp~~------------~-----~t~H-T~~~VPlIi~gpg~~~g~ 369 (403)
T 2i09_A 313 CLHEFDERLPEIIAAMKV-----DDLLLITADHGNDPTY------------A-----GTDH-TREYVPLLAYSPSFTGNG 369 (403)
T ss_dssp HHHHHHHHHHHHHHTCCT-----TEEEEEECSSBCCTTS------------S-----SSSC-BCBCEEEEEECTTCSCCE
T ss_pred HHHHHHHHHHHHHHhhCC-----CCEEEEecCCCCCCCC------------C-----CcCC-CCCceeEEEEECCCCCCc
Confidence 378999999999999874 7999999999985411 0 0101 124999999999987655
Q ss_pred eeccceehhhHHHHHHHHhCCCCCC
Q psy7399 81 VLENLMHITDWLPTLYFIAGKEKNI 105 (107)
Q Consensus 81 ~~~~~~~~~Di~pTil~l~gi~~~~ 105 (107)
...... +.||+||+|+++|++.|.
T Consensus 370 ~l~~~~-l~DIaPTIldllGl~~P~ 393 (403)
T 2i09_A 370 VLPVGH-YADISATIADNFGVDTAM 393 (403)
T ss_dssp ECCCEE-TTHHHHHHHHHTTCCCCS
T ss_pred CcCCCE-EeeHHHHHHHHcCcCCCC
Confidence 545555 999999999999999885
No 21
>3q3q_A Alkaline phosphatase; hydrolase; 1.95A {Sphingomonas SP}
Probab=99.60 E-value=2.7e-15 Score=111.15 Aligned_cols=45 Identities=16% Similarity=0.087 Sum_probs=38.6
Q ss_pred CccCCCccccEEEEcCCCCCCeeeccceehhhHHHHHHHHhCCCCC
Q psy7399 59 SFHEGGVRNVAALWSPLLRKGQVLENLMHITDWLPTLYFIAGKEKN 104 (107)
Q Consensus 59 ~~~~~~~~vP~ii~~p~~~~~~~~~~~~~~~Di~pTil~l~gi~~~ 104 (107)
..++..+|+|||++||+++++. +.++++++||+|||++++|++.|
T Consensus 493 ~~~~~d~~vPli~~Gpgik~g~-~~~~v~~~DIaPTl~~llgi~~P 537 (565)
T 3q3q_A 493 SPWDTDRRVPILFWRKGMQHFE-QPLGVETVDILPSLAALIKLPVP 537 (565)
T ss_dssp CSSHHHHEEEEEEEETTCCCEE-CCSCEEGGGHHHHHHHHTTCCCC
T ss_pred CCCCCCceeEEEEEcCCcCCCc-ccCceeehHHHHHHHHHhCCCCC
Confidence 3344457999999999998755 57889999999999999999998
No 22
>3nkq_A Ectonucleotide pyrophosphatase/phosphodiesterase member 2; lysophospholipase D, autotaxin, ENPP2, lysophosphatidic acid hydrolase; HET: NAG BMA MAN NKQ; 1.70A {Mus musculus} PDB: 3nkm_A* 3nkn_A* 3nkp_A* 3nko_A* 3nkr_A* 2xrg_A* 2xr9_A*
Probab=99.56 E-value=2.5e-14 Score=109.96 Aligned_cols=105 Identities=14% Similarity=0.176 Sum_probs=74.9
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCCCCCCCC-----------------------------cc--------
Q psy7399 1 MLKSLDESVGRVIQSLEEEGLLGNSLVVFISDNGGPTVDSL-----------------------------HF-------- 43 (107)
Q Consensus 1 ~i~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~~~~~~~-----------------------------~~-------- 43 (107)
+|+++|++||+|+++|+++|+++||+||||||||+...... ..
T Consensus 292 al~~vD~~IG~Ll~~Lk~~GL~dnT~VI~TSDHGm~~v~~~~~i~L~~~~~~~~~~~~~~g~~~~i~p~~~~~~~~~~~~ 371 (831)
T 3nkq_A 292 PLREIDKTVGQLMDGLKQLKLHRCVNVIFVGDHGMEDVTCDRTEFLSNYLTNVDDITLVPGTLGRIRPKIPNNLKYDPKA 371 (831)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTTCEEEEEESCCCEECCTTSEEEGGGTCSCGGGEEEECBSEEEEEESSTTCTTCCHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCEEEEEEcCCCCCCCCCccEEeHHHhCccccceEEecCCceEEEecCCccccccHHH
Confidence 47899999999999999999999999999999996532100 00
Q ss_pred --------c--C-----------------------------CCCC-----C----------CCcccccC-CccCCCcccc
Q psy7399 44 --------H--G-----------------------------NTAS-----N----------WPLRGTKY-SFHEGGVRNV 68 (107)
Q Consensus 44 --------~--~-----------------------------~~~~-----~----------~~~~~~~~-~~~~~~~~vP 68 (107)
+ . ..++ . ....|.++ ......+|..
T Consensus 372 v~~~L~~~~~~~~~~vy~k~~lP~r~hy~~~~Ri~~i~~~~~~gw~i~~~~~~~~~~~~~~~~~~G~HGydn~~~~M~ai 451 (831)
T 3nkq_A 372 IIANLTCKKPDQHFKPYMKQHLPKRLHYANNRRIEDLHLLVERRWHVARKPLDVYKKPSGKCFFQGDHGFDNKVNSMQTV 451 (831)
T ss_dssp HHHHHSSCSTTCCEEEEEGGGSCGGGCCCSSTTSCSEEEEECTTCEEESCCC---------CCCCEECCSCTTSGGGCBC
T ss_pred HHHHhhccccCCceEEEeccccchhhcccCCCccCCeEEEecCCEEEecccccccccccccccccCccCCCCCCccceee
Confidence 0 0 0000 0 00112222 1223458899
Q ss_pred EEEEcCCCCCCeeeccceehhhHHHHHHHHhCCCCCCC
Q psy7399 69 AALWSPLLRKGQVLENLMHITDWLPTLYFIAGKEKNID 106 (107)
Q Consensus 69 ~ii~~p~~~~~~~~~~~~~~~Di~pTil~l~gi~~~~~ 106 (107)
|+.+||.++.+.. -.+...+||+|.|+++|||++.++
T Consensus 452 F~a~GP~Fk~~~~-~~~f~nvdvY~lmc~lLgi~p~pn 488 (831)
T 3nkq_A 452 FVGYGPTFKYRTK-VPPFENIELYNVMCDLLGLKPAPN 488 (831)
T ss_dssp EEEESTTBCSSEE-CCCEEGGGHHHHHHHHHTCCCCSC
T ss_pred eeEEcCccCCCcc-CCCcceeeHHHHHHHHcCCCCCCC
Confidence 9999999998755 578899999999999999997543
No 23
>2zkt_A 2,3-bisphosphoglycerate-independent phosphoglycer mutase; phosphonopyruvate decarboxylase, isomerase, structural genom NPPSFA; 2.40A {Pyrococcus horikoshii}
Probab=99.43 E-value=2.4e-13 Score=97.60 Aligned_cols=78 Identities=12% Similarity=0.211 Sum_probs=58.7
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCCCCCCCCcccCCCCCCCCcccccCCccCCCccccEEEEcCCCCCCee
Q psy7399 2 LKSLDESVGRVIQSLEEEGLLGNSLVVFISDNGGPTVDSLHFHGNTASNWPLRGTKYSFHEGGVRNVAALWSPLLRKGQV 81 (107)
Q Consensus 2 i~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~ii~~p~~~~~~~ 81 (107)
++.+|++|++++++|++.+ ++||||||||.... .+. ....+|||++++|++.++..
T Consensus 320 ie~~D~~lg~ll~al~~~~----~~liitaDHG~p~~-----------------~~~---Ht~~~VP~ii~g~~~~~~~~ 375 (412)
T 2zkt_A 320 IERADRMIGYILDHVDLEE----VVIAITGDHSTPCE-----------------VMN---HSGDPVPLLIAGGGVRTDDT 375 (412)
T ss_dssp HHHHHHHHHHHHTTSCTTT----EEEEEECSSBCCTT-----------------TTS---CBCCCEEEEEESTTCCCCSC
T ss_pred HHHHHHHHHHHHHHHHhCC----CEEEEECCCCCCCC-----------------CCc---CCCCceeEEEEeCCcCCCcc
Confidence 7899999999999998763 89999999997421 111 23358999999998753211
Q ss_pred -------e-cc---ceehhhHHHHHHHHhCCCC
Q psy7399 82 -------L-EN---LMHITDWLPTLYFIAGKEK 103 (107)
Q Consensus 82 -------~-~~---~~~~~Di~pTil~l~gi~~ 103 (107)
. .. .++..||+||+++++|++.
T Consensus 376 ~~f~E~~~~~g~l~~i~~~Di~pTil~llg~~~ 408 (412)
T 2zkt_A 376 KRFGEREAMKGGLGRIRGHDIVPIMMDLMNRSE 408 (412)
T ss_dssp CSCSHHHHTTCTTEEEEGGGHHHHHHHHTTCCC
T ss_pred cccccccccCcccccccHHHHHHHHHHHhCCCc
Confidence 0 11 4567799999999999974
No 24
>3a52_A Cold-active alkaline phosphatase; hydrolase; 2.20A {Shewanella}
Probab=98.44 E-value=6.1e-07 Score=64.24 Aligned_cols=31 Identities=16% Similarity=0.352 Sum_probs=27.8
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCC
Q psy7399 2 LKSLDESVGRVIQSLEEEGLLGNSLVVFISDNGG 35 (107)
Q Consensus 2 i~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~ 35 (107)
+..+|+.|+..++.+++. ++|+||+|||||.
T Consensus 242 ~~~fD~AV~~al~~~~~~---~dTLIIVTADH~~ 272 (400)
T 3a52_A 242 MQGFANAIEVVEQYIRQH---PDTLLVVTADHNT 272 (400)
T ss_dssp HHHHHHHHHHHHHHHHHC---CSEEEEEECSCEE
T ss_pred HHHHHHHHHHHHHHHhcC---CCcEEEEeccCCC
Confidence 467899999999999986 4899999999987
No 25
>3kd8_A 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; structural genomics, PSI-2, protein genomics, MCSG, glycolysis isomerase; 2.60A {Thermoplasma acidophilum} PDB: 3idd_A
Probab=98.37 E-value=1.7e-07 Score=67.06 Aligned_cols=73 Identities=12% Similarity=0.265 Sum_probs=46.3
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCCCCCCCCcccCCCCCCCCcccccCCccCCCccccEEEEcCCCCC-C-
Q psy7399 2 LKSLDESVGRVIQSLEEEGLLGNSLVVFISDNGGPTVDSLHFHGNTASNWPLRGTKYSFHEGGVRNVAALWSPLLRK-G- 79 (107)
Q Consensus 2 i~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~ii~~p~~~~-~- 79 (107)
|+.+|++|+++++ |+ +++++++|+|||..... +. ...-.||+++++|++.+ +
T Consensus 317 ie~~D~~l~~i~~-l~-----~~~~liITaDHg~p~~~-----------------~~---HT~~pVP~ii~g~~~~~d~v 370 (399)
T 3kd8_A 317 IEDIDRAMEPLKS-IG-----DHAVICVTGDHSTPCSF-----------------KD---HSGDPVPIVFYTDGVMNDGV 370 (399)
T ss_dssp HHHHHHTTGGGGS-CT-----TTEEEEEEEC-------------------------------CCCEEEEEEETTCCCCSC
T ss_pred HHHHHHHHHHHHc-cC-----CCCEEEEECCCCCCCCC-----------------CC---CCCCCccEEEEcCCCCCCCC
Confidence 6788999999998 65 46899999999974210 11 11236999999999865 2
Q ss_pred eeecc--------ceehhhHHHHHHHHhC
Q psy7399 80 QVLEN--------LMHITDWLPTLYFIAG 100 (107)
Q Consensus 80 ~~~~~--------~~~~~Di~pTil~l~g 100 (107)
...++ ...-.++++.++++++
T Consensus 371 ~~f~E~~~~~g~l~~~g~~lm~~~l~~~~ 399 (399)
T 3kd8_A 371 HLFDELSSASGSLRITSYNVMDILMQLAG 399 (399)
T ss_dssp CCCSTTTGGGSSEEEEGGGHHHHHHHTTC
T ss_pred CccCHHHHhCCCccccHHHHHHHHHHhcC
Confidence 11222 1245799999998764
No 26
>1zed_A Alkaline phosphatase; phosphoserine, substrate analog, hydro; HET: NAG PNP; 1.57A {Homo sapiens} SCOP: c.76.1.1 PDB: 1zeb_A* 1zef_A* 2glq_A* 3mk0_A* 3mk1_A* 3mk2_A* 1ew2_A*
Probab=98.35 E-value=6e-07 Score=65.59 Aligned_cols=40 Identities=15% Similarity=0.031 Sum_probs=31.1
Q ss_pred CCccccEEEEcCCCCCCeeeccceehhhHHHHHHHHhCCCCCC
Q psy7399 63 GGVRNVAALWSPLLRKGQVLENLMHITDWLPTLYFIAGKEKNI 105 (107)
Q Consensus 63 ~~~~vP~ii~~p~~~~~~~~~~~~~~~Di~pTil~l~gi~~~~ 105 (107)
.+..||+++++|+... ......+.||+.+|++++|+....
T Consensus 433 TgedVpv~A~GPga~~---f~G~~dntdI~~~ia~algl~~~~ 472 (484)
T 1zed_A 433 AGEDVAVFARGPQAHL---VHGVQEQTFIAHVMAFAACLEPYT 472 (484)
T ss_dssp ECSCEEEEEESTTGGG---CCSEEETTHHHHHHHHHTTCGGGS
T ss_pred CCceeeEEEECCCccc---cCCcccHHHHHHHHHHHhCCCCCc
Confidence 3467999999999753 234456899999999999997543
No 27
>1k7h_A Alkaline phosphatase; hydrolase, transferase, phosphomonoester, extended beta SHEE triad, metal triad; HET: NAG; 1.92A {Pandalus borealis} SCOP: c.76.1.1 PDB: 1shq_A* 1shn_A*
Probab=98.31 E-value=1.4e-06 Score=63.52 Aligned_cols=38 Identities=11% Similarity=0.012 Sum_probs=30.3
Q ss_pred CccccEEEEcCCCCCCeeeccceehhhHHHHHHHHhCCCCC
Q psy7399 64 GVRNVAALWSPLLRKGQVLENLMHITDWLPTLYFIAGKEKN 104 (107)
Q Consensus 64 ~~~vP~ii~~p~~~~~~~~~~~~~~~Di~pTil~l~gi~~~ 104 (107)
+..||+++++|+... ......+.||+.+|++++|+..-
T Consensus 434 gedVpv~A~GPga~~---f~G~~entdI~~~ia~a~gl~~~ 471 (476)
T 1k7h_A 434 GTDVGIWVNGPFAHL---FTGVYEENYIPHALAYAACVGTG 471 (476)
T ss_dssp CSCEEEEEESTTGGG---CSSEEETTHHHHHHHHHHTCSSS
T ss_pred CceEeeEEECCCccc---CCCcccHHHHHHHHHHHhCCCCc
Confidence 457999999999753 23445689999999999999754
No 28
>3tg0_A Apase, alkaline phosphatase; hydrolase; 1.20A {Escherichia coli} SCOP: c.76.1.1 PDB: 1b8j_A 1ed9_A 1ew8_A 1ew9_A 1ed8_A 1y6v_A 3bdg_B 1elx_A 2g9y_A 2ga3_A* 3bdh_A 3cmr_A 1elz_A 1hjk_A* 1hqa_A 1ely_A 3dyc_A 1ali_A 1alj_A 3bdf_A ...
Probab=98.31 E-value=2.5e-06 Score=61.76 Aligned_cols=95 Identities=23% Similarity=0.235 Sum_probs=61.7
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCCCCCC--CC-cccCC-----CCCCCCcc-----cccCCccCCCcccc
Q psy7399 2 LKSLDESVGRVIQSLEEEGLLGNSLVVFISDNGGPTVD--SL-HFHGN-----TASNWPLR-----GTKYSFHEGGVRNV 68 (107)
Q Consensus 2 i~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~~~~~--~~-~~~~~-----~~~~~~~~-----~~~~~~~~~~~~vP 68 (107)
+..+|+.|+.+++.+++. ++|+||+|+|||..... .. +.... ...+.++. +.-.+.-.++.-||
T Consensus 342 ~~~fD~av~~a~~~~~~~---~dTLiiVTADH~~~~~~~g~~~~~~g~~~~~~~~dg~~~~l~y~~g~~~se~HtG~dV~ 418 (449)
T 3tg0_A 342 TVDLDEAVQRALEFAKKE---GNTLVIVTADHAHASQIVAPDTKAPGLTQALNTKDGAVMVMSYGNSEEDSQEHTGSQLR 418 (449)
T ss_dssp HHHHHHHHHHHHHHHHHH---SSEEEEEECSSBCSCEEECTTCCCSSEEEEEECTTSSEEEEEECSCSSSSCCCBCCCEE
T ss_pred HHHHHHHHHHHHHHHhcC---CCcEEEEeCCCCCcccccCCCCCCcccccccccCCCCeeeeecccCCCCCCCcCCceee
Confidence 467899999999999875 47999999999987521 00 00000 00001100 00112233567899
Q ss_pred EEEEcCCCCCCeeeccceehhhHHHHHHHHhCCC
Q psy7399 69 AALWSPLLRKGQVLENLMHITDWLPTLYFIAGKE 102 (107)
Q Consensus 69 ~ii~~p~~~~~~~~~~~~~~~Di~pTil~l~gi~ 102 (107)
++.+||+... ......+.+|+..|..++|+.
T Consensus 419 v~A~GP~A~~---f~G~~eqt~i~~~m~~al~l~ 449 (449)
T 3tg0_A 419 IAAYGPHAAN---VVGLTDQTDLFYTMKAALGLK 449 (449)
T ss_dssp EEEESTTGGG---GSEEEEHHHHHHHHHHHTTC-
T ss_pred EEeecCChhh---cCcceeccHHHHHHHHHhCCC
Confidence 9999999753 345677899999999999863
No 29
>2d1g_A Acid phosphatase; ACPA, decavanadate vanadate, hydrolase; HET: DVT ETE PGE; 1.75A {Francisella tularensis subsp}
Probab=98.22 E-value=1.7e-05 Score=58.19 Aligned_cols=96 Identities=15% Similarity=0.111 Sum_probs=70.6
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCCCCCCCCcccCCCCCCCCcccccCCccCCCccccEEEEcCCCCCCee
Q psy7399 2 LKSLDESVGRVIQSLEEEGLLGNSLVVFISDNGGPTVDSLHFHGNTASNWPLRGTKYSFHEGGVRNVAALWSPLLRKGQV 81 (107)
Q Consensus 2 i~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~ii~~p~~~~~~~ 81 (107)
+..-|..++++++.|.+...|++|+||+|=|-...... |.. ....+-.| ....+.-|.|||+++..|-.++|.+
T Consensus 356 ~~~g~~~v~~v~~al~~sp~W~~T~iiit~DE~~G~~D----HV~-pP~~p~~G-~~~~~GlG~RVP~~viSP~~k~G~V 429 (498)
T 2d1g_A 356 PLDEQEWLVNTINRIQQSKDWDSTAIIIIYDDSDGDYD----HVY-SPKSQFSD-IKGRQGYGPRLPMLVISPYAKANYV 429 (498)
T ss_dssp HHHHHHHHHHHHHHHHTSTTGGGEEEEEEESCCTTCCC----CCC-CCCCTTTT-STTCCCCCCBCCEEEESTTBCTTEE
T ss_pred hHHHHHHHHHHHHHHhcCccccCcEEEEEEECCCCCcc----CcC-CCCcCCCC-ccCccCCCCcceEEEecCCCCCCce
Confidence 35568899999999999988999999999885433211 100 00000001 1122445789999999999999999
Q ss_pred eccceehhhHHHHHHHHhCCCC
Q psy7399 82 LENLMHITDWLPTLYFIAGKEK 103 (107)
Q Consensus 82 ~~~~~~~~Di~pTil~l~gi~~ 103 (107)
.++..++..|..||-+..|++.
T Consensus 430 ~~~~~dH~Silrtie~~~gl~~ 451 (498)
T 2d1g_A 430 DHSLLNQASVLKFIEYNWGIGS 451 (498)
T ss_dssp ECCCEETHHHHHHHHHHHTCCC
T ss_pred eCCccchhHHHHHHHHHhCCCC
Confidence 9999999999999999999873
No 30
>1ei6_A Phosphonoacetate hydrolase; zinc,; HET: TLA; 2.10A {Pseudomonas fluorescens} SCOP: c.76.1.4
Probab=97.92 E-value=5.4e-06 Score=58.86 Aligned_cols=29 Identities=17% Similarity=0.299 Sum_probs=25.8
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCCCC
Q psy7399 1 MLKSLDESVGRVIQSLEEEGLLGNSLVVFISDNGGPT 37 (107)
Q Consensus 1 ~i~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~~~ 37 (107)
+++++|+.||+|+++ ||+||||||||...
T Consensus 217 ~l~~lD~~lg~ll~~--------~t~vivtSDHG~~~ 245 (406)
T 1ei6_A 217 FYAMMDSYFKRYHEQ--------GAIVAITADHGMNA 245 (406)
T ss_dssp HHHHHHHHHHHHHHT--------TCEEEEECSCCCEE
T ss_pred HHHHHHHHHHHHHhC--------CCEEEEEeCCCCcc
Confidence 478999999999987 89999999999853
No 31
>2x98_A Alkaline phosphatase; hydrolase; 1.70A {Halobacterium salinarum}
Probab=97.54 E-value=0.00037 Score=50.37 Aligned_cols=38 Identities=13% Similarity=0.010 Sum_probs=30.2
Q ss_pred CCccccEEEEcCCCCCCeeeccceehhhHHHHHHHHhCCCC
Q psy7399 63 GGVRNVAALWSPLLRKGQVLENLMHITDWLPTLYFIAGKEK 103 (107)
Q Consensus 63 ~~~~vP~ii~~p~~~~~~~~~~~~~~~Di~pTil~l~gi~~ 103 (107)
.+.-||+..++|+... ......+.||+-.|+.++|++.
T Consensus 393 tg~dV~v~A~GP~a~~---f~G~~ent~I~~~m~~alGldl 430 (431)
T 2x98_A 393 TGTDVPVFAHGPNAAR---FDAARDNTAVADALAAALGVSL 430 (431)
T ss_dssp ECCCEEEEEESTTGGG---GSSEEETTHHHHHHHHHHTCCC
T ss_pred cccchHhheECCCccc---CCCccchHHHHHHHHHHhCCCC
Confidence 4567999999998643 2345678899999999999975
No 32
>3szy_A Phosphonoacetate hydrolase; alkaline phosphatase superfamily; 1.35A {Sinorhizobium meliloti} SCOP: c.76.1.0 PDB: 3szz_A 3t00_A 3t01_A 3t02_A
Probab=97.18 E-value=0.00028 Score=50.79 Aligned_cols=38 Identities=13% Similarity=-0.146 Sum_probs=27.3
Q ss_pred CccccEEEEcC--CCCCCeeeccceehhhHHHHHHHHhCCC
Q psy7399 64 GVRNVAALWSP--LLRKGQVLENLMHITDWLPTLYFIAGKE 102 (107)
Q Consensus 64 ~~~vP~ii~~p--~~~~~~~~~~~~~~~Di~pTil~l~gi~ 102 (107)
..+||||+++| +++++.. -+....+|++||.+.++|.+
T Consensus 385 em~vp~i~~gp~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~ 424 (427)
T 3szy_A 385 EQEVPFIVNRVLPELPNAPR-LRNFDAFFYAVTAAAEAGAE 424 (427)
T ss_dssp GCEEEEEESSCCTTCCCTTT-SBGGGHHHHHHHHHC-----
T ss_pred cccceEEEECCcccccccCc-cCCcchhhhhhhhhhhcccc
Confidence 46899999999 8877544 45688999999999887654
No 33
>2w0y_A APH, alkaline phosphatase; hydrolase, halophilic; 1.7A {Halobacterium salinarum R1} PDB: 2x98_A
Probab=96.48 E-value=0.0019 Score=47.09 Aligned_cols=38 Identities=13% Similarity=0.010 Sum_probs=29.9
Q ss_pred CCccccEEEEcCCCCCCeeeccceehhhHHHHHHHHhCCCC
Q psy7399 63 GGVRNVAALWSPLLRKGQVLENLMHITDWLPTLYFIAGKEK 103 (107)
Q Consensus 63 ~~~~vP~ii~~p~~~~~~~~~~~~~~~Di~pTil~l~gi~~ 103 (107)
.+.-||+..++|+... ......+.||+--|.+++|++.
T Consensus 436 Tg~dV~vyA~Gpga~~---f~G~~dNTdI~~~i~~~lg~~l 473 (473)
T 2w0y_A 436 TGTDVPVFAHGPNAAR---FDAARDNTAVADALAAALGVSL 473 (473)
T ss_dssp ECCCEEEEEESTTGGG---GSSEEETTHHHHHHHHHHTCCC
T ss_pred cCCceeeEEEcCChhh---cCCceehHHHHHHHHHHHCCCC
Confidence 4567999999998643 2445678899999999999863
No 34
>1ei6_A Phosphonoacetate hydrolase; zinc,; HET: TLA; 2.10A {Pseudomonas fluorescens} SCOP: c.76.1.4
Probab=95.96 E-value=0.0031 Score=44.63 Aligned_cols=31 Identities=10% Similarity=-0.129 Sum_probs=24.6
Q ss_pred CccccEEEEcCCC---CCCeeeccceehhhHHHHHH
Q psy7399 64 GVRNVAALWSPLL---RKGQVLENLMHITDWLPTLY 96 (107)
Q Consensus 64 ~~~vP~ii~~p~~---~~~~~~~~~~~~~Di~pTil 96 (107)
.+++||++++| + +++ ...+.++.+||+||++
T Consensus 372 ~~~~p~i~~Gp-i~~~~~~-~~~~~~~~~diApt~~ 405 (406)
T 1ei6_A 372 EQKVPLIFNRK-LVGLDSP-GRLRNFDIIDLALNHL 405 (406)
T ss_dssp GCEEEEEESSC-BCCCC---CCCBGGGHHHHHHHCB
T ss_pred cccceEEEEEe-cccCCCC-ceeccccceeeccccc
Confidence 37999999999 8 444 3467899999999975
No 35
>3e2d_A Alkaline phosphatase; cold-adaptation, metalloenzyme, dimer, psychrophilic bacteria, crystallography, hydrolase; 1.40A {Vibrio SP}
Probab=95.46 E-value=0.0077 Score=44.28 Aligned_cols=29 Identities=17% Similarity=0.385 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCC
Q psy7399 3 KSLDESVGRVIQSLEEEGLLGNSLVVFISDNG 34 (107)
Q Consensus 3 ~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG 34 (107)
..+|+.|+..++.+++. ++|+||+|+||+
T Consensus 289 ~~fD~AV~~A~~~~~~~---~dTLIIVTADH~ 317 (502)
T 3e2d_A 289 LKFDEAIQTVYEWAKDR---EDTIVIVTADHE 317 (502)
T ss_dssp HHHHHHHHHHHHHHTTC---SSEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhhcC---CCeEEEEeCCCC
Confidence 46899999999999764 579999999995
No 36
>3szy_A Phosphonoacetate hydrolase; alkaline phosphatase superfamily; 1.35A {Sinorhizobium meliloti} SCOP: c.76.1.0 PDB: 3szz_A 3t00_A 3t01_A 3t02_A
Probab=95.30 E-value=0.016 Score=41.71 Aligned_cols=13 Identities=8% Similarity=-0.276 Sum_probs=6.3
Q ss_pred ceehhhHHHHHHH
Q psy7399 85 LMHITDWLPTLYF 97 (107)
Q Consensus 85 ~~~~~Di~pTil~ 97 (107)
.+...|++=-.+.
T Consensus 404 ~~~~~~~~d~~~~ 416 (427)
T 3szy_A 404 RLRNFDAFFYAVT 416 (427)
T ss_dssp TSBGGGHHHHHHH
T ss_pred ccCCcchhhhhhh
Confidence 3555555544433
No 37
>2fdo_B Hypothetical protein AF2331; X-RAY crystallography, multiwavelength anomalous dispersion, conserved hypothetical protein; 2.40A {Archaeoglobus fulgidus} SCOP: d.337.1.1
Probab=71.05 E-value=5.6 Score=22.03 Aligned_cols=23 Identities=30% Similarity=0.315 Sum_probs=17.6
Q ss_pred HHHHHHHHhCCCCCeEEEEEcCCC
Q psy7399 11 RVIQSLEEEGLLGNSLVVFISDNG 34 (107)
Q Consensus 11 ~l~~~l~~~g~~~nTlii~tsDHG 34 (107)
-+++.|++. +.+++++|+.||--
T Consensus 12 sFlkFlekn-l~ed~vvvVSSDVt 34 (94)
T 2fdo_B 12 SFLKFLEGH-LEDDVVVVVSSDVT 34 (94)
T ss_dssp HHHHHHHHH-CCTTEEEEEECCEE
T ss_pred HHHHHHHhc-cCCCeEEEEeccch
Confidence 466777664 77899999999853
No 38
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=63.54 E-value=9.1 Score=26.42 Aligned_cols=28 Identities=11% Similarity=0.178 Sum_probs=23.5
Q ss_pred HHHHHHHHHhCCCCCeEEEEEcCCCCCC
Q psy7399 10 GRVIQSLEEEGLLGNSLVVFISDNGGPT 37 (107)
Q Consensus 10 g~l~~~l~~~g~~~nTlii~tsDHG~~~ 37 (107)
.+|-+.|.+.|+.++|.||++.|.|...
T Consensus 99 ~~f~~~l~~lGI~~d~~VVvYD~~~~~~ 126 (327)
T 3utn_X 99 KVFDDAMSNLGVQKDDILVVYDRVGNFS 126 (327)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECSSSSSS
T ss_pred HHHHHHHHHcCCCCCCEEEEEeCCCCcH
Confidence 4677888999999999999998887643
No 39
>4hdr_B ARSB; transferase; HET: DMD; 1.45A {Sporomusa ovata} PDB: 4hdm_B 4hdn_B 4hdk_B* 4hds_B
Probab=54.72 E-value=6.4 Score=27.67 Aligned_cols=17 Identities=29% Similarity=0.538 Sum_probs=13.6
Q ss_pred CCCCeEEEEEcCCCCCC
Q psy7399 21 LLGNSLVVFISDNGGPT 37 (107)
Q Consensus 21 ~~~nTlii~tsDHG~~~ 37 (107)
+.+..++||.+|||-..
T Consensus 55 ~~~~~v~vfAgDHGV~~ 71 (350)
T 4hdr_B 55 ALEKSIIIMAADNGVAM 71 (350)
T ss_dssp CCCEEEEEEEECCCCC-
T ss_pred CCCceEEEEECCCcccc
Confidence 45678999999999864
No 40
>1gak_A SP18, fertilization protein; helical bundle, cell adhesion; 1.85A {Haliotis fulgens} SCOP: a.19.1.1
Probab=52.13 E-value=12 Score=22.47 Aligned_cols=21 Identities=19% Similarity=0.431 Sum_probs=18.5
Q ss_pred ChHHHHHHHHHHHHHHHHhCC
Q psy7399 1 MLKSLDESVGRVIQSLEEEGL 21 (107)
Q Consensus 1 ~i~~~D~~ig~l~~~l~~~g~ 21 (107)
|++++|...++|.+.+++-|+
T Consensus 18 m~~fLD~~~~kfkkr~~~m~~ 38 (141)
T 1gak_A 18 MVNFLDEEMHKLVKRFRDMRW 38 (141)
T ss_dssp HHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHhcCC
Confidence 578999999999999998774
No 41
>3k1t_A Glutamate--cysteine ligase GSHA; putative gamma-glutamylcysteine synthetase; HET: MSE; 1.90A {Methylobacillus flagellatus KT}
Probab=48.45 E-value=19 Score=25.89 Aligned_cols=35 Identities=17% Similarity=0.325 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCCCC
Q psy7399 3 KSLDESVGRVIQSLEEEGLLGNSLVVFISDNGGPT 37 (107)
Q Consensus 3 ~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~~~ 37 (107)
..+|..+.++-++.++.|+.+.-.|++=+|.|...
T Consensus 256 ~~Vd~lL~kIr~KY~eygI~~~PfV~VKADaGTYG 290 (432)
T 3k1t_A 256 EKVDSLLAKIRRKYAEYGVKQEPFVIVKADAGTYG 290 (432)
T ss_dssp HHHHHHHHHHHHHHHHHTCCSCCCEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCCCC
Confidence 56899999999999999999999999999999764
No 42
>4hdr_A ARSA; transferase; HET: DMD; 1.45A {Sporomusa ovata} PDB: 4hdm_A 4hdn_A 4hdk_A* 4hds_A
Probab=46.56 E-value=7 Score=27.46 Aligned_cols=18 Identities=28% Similarity=0.255 Sum_probs=14.1
Q ss_pred CCCCeEEEEEcCCCCCCC
Q psy7399 21 LLGNSLVVFISDNGGPTV 38 (107)
Q Consensus 21 ~~~nTlii~tsDHG~~~~ 38 (107)
+.+..++||.+|||-...
T Consensus 59 ~~~~~v~vfAaDHGV~~e 76 (348)
T 4hdr_A 59 LPKPCMVVASADHGVARR 76 (348)
T ss_dssp CCEEEEEEEEECCGGGGG
T ss_pred CCCceEEEEECCCccccc
Confidence 345689999999997653
No 43
>3oaa_A ATP synthase subunit alpha; rossmann fold, hydrolase, hydrolase-transport PROT complex; HET: ANP ADP; 3.26A {Escherichia coli DH1} PDB: 2a7u_A
Probab=46.55 E-value=26 Score=25.94 Aligned_cols=25 Identities=36% Similarity=0.678 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHhCCCCCeEEEEEc
Q psy7399 7 ESVGRVIQSLEEEGLLGNSLVVFIS 31 (107)
Q Consensus 7 ~~ig~l~~~l~~~g~~~nTlii~ts 31 (107)
+.+..+++.|++.|..++|+||+.+
T Consensus 203 ~ev~e~~~~l~~~g~m~~tvvV~at 227 (513)
T 3oaa_A 203 STISNVVRKLEEHGALANTIVVVAT 227 (513)
T ss_dssp HHHHHHHHHHHHHSCSTTEEEEEEC
T ss_pred HHHHHHHHHHhhcCcccceEEEEEC
Confidence 4578899999999999999988765
No 44
>1wx1_A Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; structural genomics; 1.97A {Thermus thermophilus HB8} PDB: 1j33_A
Probab=44.55 E-value=9.9 Score=26.52 Aligned_cols=18 Identities=28% Similarity=0.239 Sum_probs=14.2
Q ss_pred CCCCeEEEEEcCCCCCCC
Q psy7399 21 LLGNSLVVFISDNGGPTV 38 (107)
Q Consensus 21 ~~~nTlii~tsDHG~~~~ 38 (107)
+....++||.+|||-...
T Consensus 44 ~~~~~v~vfa~DHGV~~e 61 (335)
T 1wx1_A 44 LGRGAVVVAAADHGVVAE 61 (335)
T ss_dssp CCCEEEEEEEECCGGGGG
T ss_pred CCCcEEEEEECCCccccC
Confidence 446689999999997653
No 45
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=42.78 E-value=29 Score=17.59 Aligned_cols=22 Identities=27% Similarity=0.522 Sum_probs=15.6
Q ss_pred hHHHHHHHHHHHHHHHHhCCCC
Q psy7399 2 LKSLDESVGRVIQSLEEEGLLG 23 (107)
Q Consensus 2 i~~~D~~ig~l~~~l~~~g~~~ 23 (107)
+...|..++|+-..|++.|++.
T Consensus 34 c~e~eQEieRL~~LLkqHgl~~ 55 (58)
T 3a2a_A 34 CSEKEQEIERLNKLLRQHGLLG 55 (58)
T ss_dssp HHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHHHHcCCcc
Confidence 3567899999999999998764
No 46
>3bij_A Uncharacterized protein GSU0716; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.50A {Geobacter sulfurreducens pca}
Probab=42.54 E-value=34 Score=22.80 Aligned_cols=25 Identities=20% Similarity=0.236 Sum_probs=16.6
Q ss_pred HHHHHHhCCCCCeEEEEEcCCCCCC
Q psy7399 13 IQSLEEEGLLGNSLVVFISDNGGPT 37 (107)
Q Consensus 13 ~~~l~~~g~~~nTlii~tsDHG~~~ 37 (107)
++.|.+.--.+++++++.|-||...
T Consensus 64 l~~l~~~~~~~D~~~~yfSGHG~~~ 88 (285)
T 3bij_A 64 IGKAAKALGKGDIFMLSYSGHGGQV 88 (285)
T ss_dssp HHHHHHHCCTTCEEEEEEESCEEEE
T ss_pred HHHHHHhCCCCCEEEEEEcCCcccc
Confidence 3344333234689999999999653
No 47
>1b4b_A Arginine repressor; core, oligomerization domain, helix TUR; HET: ARG; 2.20A {Geobacillus stearothermophilus} SCOP: d.74.2.1
Probab=40.60 E-value=19 Score=18.92 Aligned_cols=25 Identities=8% Similarity=0.415 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHhCCC-----CCeEEEEEcC
Q psy7399 8 SVGRVIQSLEEEGLL-----GNSLVVFISD 32 (107)
Q Consensus 8 ~ig~l~~~l~~~g~~-----~nTlii~tsD 32 (107)
.++.+++.++..++. |+|++|++-+
T Consensus 27 ~va~~iD~~~~~eI~GTIAGDDTIlvi~r~ 56 (71)
T 1b4b_A 27 AIGVLLDNLDWDEIVGTICGDDTCLIICRT 56 (71)
T ss_dssp HHHHHHHHHCCTTEEEEEECSSEEEEEESS
T ss_pred HHHHHHHhCCCCCeEEEEeeCCEEEEEECC
Confidence 466777777654432 7888888764
No 48
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=40.11 E-value=19 Score=19.33 Aligned_cols=26 Identities=8% Similarity=0.204 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHhCCC-----CCeEEEEEcCC
Q psy7399 8 SVGRVIQSLEEEGLL-----GNSLVVFISDN 33 (107)
Q Consensus 8 ~ig~l~~~l~~~g~~-----~nTlii~tsDH 33 (107)
.++.+++.++..++. |+|++|++-+-
T Consensus 35 ~vA~~iD~~~~~eIlGTIAGDDTIlvi~r~~ 65 (79)
T 2zfz_A 35 YLASAIDRAALPQVVGTIAGDDTILVVAREP 65 (79)
T ss_dssp HHHHHHHHHCCTTEEEEEECSSEEEEEECTT
T ss_pred HHHHHHHhCCCCCeEEEEecCCEEEEEECCH
Confidence 466777776654433 78999888753
No 49
>2w0y_A APH, alkaline phosphatase; hydrolase, halophilic; 1.7A {Halobacterium salinarum R1} PDB: 2x98_A
Probab=39.38 E-value=30 Score=25.35 Aligned_cols=32 Identities=13% Similarity=0.232 Sum_probs=27.5
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCCC
Q psy7399 2 LKSLDESVGRVIQSLEEEGLLGNSLVVFISDNGGP 36 (107)
Q Consensus 2 i~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~~ 36 (107)
+..+|+. +.+++.+++.+ ++|+||+|+|||..
T Consensus 319 ~~~fD~a-~~a~~~~~~~~--~dTLiIVTADH~~G 350 (473)
T 2w0y_A 319 YEATQVA-GQLVEYAETTA--EPTFLVSTGDHECG 350 (473)
T ss_dssp HHHHHHH-HHHHHHHHHCS--SCEEEEEEEEEEES
T ss_pred HHHHHHH-HHHHHHHhcCC--CCcEEEEeCcCCCC
Confidence 4678999 99999998765 78999999999873
No 50
>3dfe_A Putative PII-like signaling protein; YP_323533.1, structur genomics, joint center for structural genomics, JCSG; 2.35A {Anabaena variabilis atcc 29413} SCOP: d.58.5.0
Probab=38.74 E-value=32 Score=19.78 Aligned_cols=28 Identities=7% Similarity=0.196 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHhCCCCCeEEEEEcCC
Q psy7399 6 DESVGRVIQSLEEEGLLGNSLVVFISDN 33 (107)
Q Consensus 6 D~~ig~l~~~l~~~g~~~nTlii~tsDH 33 (107)
|+.+.++++.+.+.=.....-++|.||=
T Consensus 70 de~vd~vv~~I~~~~~t~~~G~ifVsdV 97 (111)
T 3dfe_A 70 REMAEKIADQVAIKFFTDYAGIIYICEA 97 (111)
T ss_dssp HHHHHHHHHHHHHHHTTTSCEEEEEEEE
T ss_pred HHHHHHHHHHHHHHhhCCCCEEEEEEEe
Confidence 6777788887754333444688899875
No 51
>2qe7_A ATP synthase subunit alpha; blockage of ATP hydrolysis, F1-ATPase, single analysis, thermoalkaliphilic, hydrolase; 3.06A {Bacillus SP} PDB: 1sky_B
Probab=38.70 E-value=41 Score=24.79 Aligned_cols=25 Identities=28% Similarity=0.437 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHhCCCCCeEEEEEc
Q psy7399 7 ESVGRVIQSLEEEGLLGNSLVVFIS 31 (107)
Q Consensus 7 ~~ig~l~~~l~~~g~~~nTlii~ts 31 (107)
+.+..+++.+++.|..++|+||+.+
T Consensus 203 ~Ev~~~~~~~~~~g~m~~tvvV~at 227 (502)
T 2qe7_A 203 STVAGVVETLRQHDALDYTIVVTAS 227 (502)
T ss_dssp HHHHHHHHHHHHTTCSTTEEEEEEC
T ss_pred hHHHHHHHHHhhCCCcceeEEEEEC
Confidence 4578899999999999999988765
No 52
>3gqb_B V-type ATP synthase beta chain; A3B3, V-ATPase, ATP synthesis, ATP-binding, hydrogen ION TRA hydrolase, ION transport; 2.80A {Thermus thermophilus HB8} PDB: 3a5c_D* 3a5d_D 3j0j_D*
Probab=38.65 E-value=26 Score=25.58 Aligned_cols=25 Identities=24% Similarity=0.391 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHhCCCCCeEEEEEc
Q psy7399 7 ESVGRVIQSLEEEGLLGNSLVVFIS 31 (107)
Q Consensus 7 ~~ig~l~~~l~~~g~~~nTlii~ts 31 (107)
+.+..|++.+++.|..++|++|+.+
T Consensus 199 ~Ev~e~~~~l~~~g~~~rtvvv~~t 223 (464)
T 3gqb_B 199 RELSYFIQEFERTGALSRSVLFLNK 223 (464)
T ss_dssp HHHHHHHHHHHHTSGGGGEEEEEEE
T ss_pred HHHHHHHHHhhhcccccceEEEEEC
Confidence 4678899999999999999887654
No 53
>3vr4_D V-type sodium ATPase subunit D; V-ATPase, rotary motor, P-loop, hydrolas ATPase, ATP binding; HET: MSE B3P; 2.17A {Enterococcus hirae} PDB: 3vr3_D* 3vr2_D* 3vr5_D 3vr6_D*
Probab=37.72 E-value=27 Score=25.46 Aligned_cols=25 Identities=12% Similarity=0.264 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHhCCCCCeEEEEEc
Q psy7399 7 ESVGRVIQSLEEEGLLGNSLVVFIS 31 (107)
Q Consensus 7 ~~ig~l~~~l~~~g~~~nTlii~ts 31 (107)
+.+..|++.+++.|..++|++|+.+
T Consensus 196 ~Ev~e~~~~~~~~g~~~rtvvV~at 220 (465)
T 3vr4_D 196 EEAEFFMEDFRQTGAIDRSVMFMNL 220 (465)
T ss_dssp HHHHHHHHHHHHHTGGGGEEEEEEE
T ss_pred HHHHHHHHHHhhcCCccceEEEEEC
Confidence 4577899999999999999887654
No 54
>1l5o_A COBT, nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase, NN:DBI PRT; cobalamin synthetic enzyme; HET: NCN; 1.60A {Salmonella enterica} SCOP: c.39.1.1 PDB: 1jha_A* 1jhm_A* 1jho_A* 1jhp_A* 1jhq_A* 1jhr_A* 1jhu_A 1jhv_A 1jhx_A 1jhy_A 1jh8_A 1l4e_A* 1l4f_A* 1l4g_A* 1l4h_A* 1l4k_A* 1l4l_A* 1l4m_A* 1l4n_A 1l5f_A ...
Probab=36.72 E-value=11 Score=26.55 Aligned_cols=17 Identities=18% Similarity=0.151 Sum_probs=13.4
Q ss_pred CCCeEEEEEcCCCCCCC
Q psy7399 22 LGNSLVVFISDNGGPTV 38 (107)
Q Consensus 22 ~~nTlii~tsDHG~~~~ 38 (107)
....++||.+|||-...
T Consensus 59 ~~~~v~vfagDHGV~~e 75 (356)
T 1l5o_A 59 GEKAVLVMCADHGVWDE 75 (356)
T ss_dssp CEEEEEEEEECBGGGGG
T ss_pred CCceEEEEeCCCccccc
Confidence 35589999999997653
No 55
>3h7i_A Ribonuclease H, RNAse H; BPT4 RNAse H, 5'-3' exonuclease, hydrolase, endonuclease; 1.50A {Enterobacteria phage T4} PDB: 2ihn_A 3h8w_A 3h8j_A 1tfr_A 3h8s_A
Probab=36.61 E-value=34 Score=23.56 Aligned_cols=30 Identities=13% Similarity=0.321 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCCC
Q psy7399 4 SLDESVGRVIQSLEEEGLLGNSLVVFISDNGGP 36 (107)
Q Consensus 4 ~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~~ 36 (107)
+.|..||.+..+.++.|. -++|+|+|-...
T Consensus 130 EADDiIgTLA~~a~~~g~---~V~IvSgDKDl~ 159 (305)
T 3h7i_A 130 EANDHIAVLVKKFSLEGH---KILIISSDGDFT 159 (305)
T ss_dssp CHHHHHHHHHHHHHHTTC---CEEEECSSCCCG
T ss_pred cHHHHHHHHHHHHHHCCC---cEEEEeCCCCcc
Confidence 579999999999998875 478899998754
No 56
>2p5m_A Arginine repressor; alpha-beta, L-arginine binding domain, DNA binding protein; HET: ARG; 1.95A {Bacillus subtilis} SCOP: d.74.2.1
Probab=35.74 E-value=22 Score=19.32 Aligned_cols=25 Identities=8% Similarity=0.500 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHhCCC-----CCeEEEEEcC
Q psy7399 8 SVGRVIQSLEEEGLL-----GNSLVVFISD 32 (107)
Q Consensus 8 ~ig~l~~~l~~~g~~-----~nTlii~tsD 32 (107)
.++.+++.++-.++. |+|++|++-+
T Consensus 39 ~vA~~iD~~~~~eIlGTIAGDDTIlvi~r~ 68 (83)
T 2p5m_A 39 AIGALMDNLDWDEMMGTICGDDTILIICRT 68 (83)
T ss_dssp HHHHHHHTTTCTTCCEEEECSSEEEEECSS
T ss_pred HHHHHHHhCCCCCeEEEEecCCEEEEEECC
Confidence 456666666554443 7888887654
No 57
>1b4u_B LIGA, LIGB, protocatechuate 4,5-dioxygenase; extradiol type dioxygenase, non-heme iron protein; HET: DHB; 2.20A {Sphingomonas paucimobilis} SCOP: c.56.6.1 PDB: 1bou_B
Probab=34.50 E-value=59 Score=21.94 Aligned_cols=17 Identities=6% Similarity=0.223 Sum_probs=13.2
Q ss_pred CCCCeEEEEEcCCCCCC
Q psy7399 21 LLGNSLVVFISDNGGPT 37 (107)
Q Consensus 21 ~~~nTlii~tsDHG~~~ 37 (107)
..-+++|||+.||...+
T Consensus 49 ~~Pd~Ivvis~~H~~~~ 65 (302)
T 1b4u_B 49 NMPDVVILVYNDHASAF 65 (302)
T ss_dssp TSCSEEEEEECCCSSSC
T ss_pred CCCCEEEEEeCCccccc
Confidence 34589999999998554
No 58
>2ck3_A ATP synthase subunit alpha\, mitochondrial; hydrolase; HET: ANP ADP; 1.9A {Bos taurus} SCOP: a.69.1.1 b.49.1.1 c.37.1.11 PDB: 1bmf_A* 1e1q_A* 1e1r_A* 1e79_A* 1h8h_A* 1nbm_A* 1ohh_A* 1qo1_A 1w0j_A* 1w0k_A* 1h8e_A* 2jdi_A* 2wss_A* 2w6j_A 2w6e_A 2w6g_A 2w6f_A 2w6h_A 2w6i_A 1cow_A* ...
Probab=33.19 E-value=42 Score=24.81 Aligned_cols=25 Identities=16% Similarity=0.376 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHhCCCCCeEEEEEc
Q psy7399 7 ESVGRVIQSLEEEGLLGNSLVVFIS 31 (107)
Q Consensus 7 ~~ig~l~~~l~~~g~~~nTlii~ts 31 (107)
+.+..+++.+++.|..++|+||+.+
T Consensus 211 ~Ev~~~~~~~~~~g~m~~tvvV~at 235 (510)
T 2ck3_A 211 STVAQLVKRLTDADAMKYTIVVSAT 235 (510)
T ss_dssp HHHHHHHHHHHHTTCGGGEEEEEEC
T ss_pred HHHHHHHHHHHhcCCcccceEEEEC
Confidence 4678899999999999999988765
No 59
>2r9v_A ATP synthase subunit alpha; TM1612, structural genomics, JOI for structural genomics, JCSG, protein structure initiative ATP synthesis; HET: ATP PG4; 2.10A {Thermotoga maritima MSB8}
Probab=32.40 E-value=38 Score=25.08 Aligned_cols=25 Identities=28% Similarity=0.476 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHhCCCCCeEEEEEc
Q psy7399 7 ESVGRVIQSLEEEGLLGNSLVVFIS 31 (107)
Q Consensus 7 ~~ig~l~~~l~~~g~~~nTlii~ts 31 (107)
+.+..+++.+++.|..++|+||+.+
T Consensus 216 ~Ev~e~~~~~~~~g~m~rtvvV~at 240 (515)
T 2r9v_A 216 SAIARIIDKLRQYGAMEYTTVVVAS 240 (515)
T ss_dssp HHHHHHHHHHHHTTGGGGEEEEEEC
T ss_pred HHHHHHHHHHHhCCCcceeEEEEEC
Confidence 4678899999999999999988765
No 60
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=32.07 E-value=54 Score=17.93 Aligned_cols=24 Identities=21% Similarity=0.338 Sum_probs=17.3
Q ss_pred HHHHHHHHhCCCCCeEEEEEcCCC
Q psy7399 11 RVIQSLEEEGLLGNSLVVFISDNG 34 (107)
Q Consensus 11 ~l~~~l~~~g~~~nTlii~tsDHG 34 (107)
.+++.+++........|++++.+.
T Consensus 67 ~~~~~l~~~~~~~~~~ii~~~~~~ 90 (132)
T 3lte_A 67 DVIRSLRQNKVANQPKILVVSGLD 90 (132)
T ss_dssp HHHHHHHTTTCSSCCEEEEECCSC
T ss_pred HHHHHHHhcCccCCCeEEEEeCCC
Confidence 577888877665678888887553
No 61
>1zwx_A SMCL, sphingomyelinase-C; dnase1-like fold, beta-hairpin, hydrolase; 1.90A {Listeria ivanovii} SCOP: d.151.1.3
Probab=31.62 E-value=49 Score=21.37 Aligned_cols=31 Identities=6% Similarity=0.104 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHhCCCCCeEEEEEcCCCCCC
Q psy7399 7 ESVGRVIQSLEEEGLLGNSLVVFISDNGGPT 37 (107)
Q Consensus 7 ~~ig~l~~~l~~~g~~~nTlii~tsDHG~~~ 37 (107)
.++..|.+.+++.....+.-+|+++|--...
T Consensus 170 ~q~~~l~~~i~~~~~~~~~pvIl~GDfN~~~ 200 (301)
T 1zwx_A 170 EQMQEIQTFIAKKNIPKDEIIFIGGDLNVNY 200 (301)
T ss_dssp HHHHHHHHHHHHHTCCTTSEEEEEEECCCCT
T ss_pred HHHHHHHHHHHHhCCCCCCeEEEEeeCCCCC
Confidence 4667788888876444556789999976554
No 62
>2c61_A A-type ATP synthase non-catalytic subunit B; hydrolase, H+ ATPase, A1AO, ATP synthesis, hydrogen ION transport, ION transport; 1.5A {Methanosarcina mazei GO1} PDB: 3dsr_A* 3b2q_A* 2rkw_A* 3eiu_A*
Probab=31.57 E-value=39 Score=24.66 Aligned_cols=25 Identities=20% Similarity=0.315 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHhCCCCCeEEEEEc
Q psy7399 7 ESVGRVIQSLEEEGLLGNSLVVFIS 31 (107)
Q Consensus 7 ~~ig~l~~~l~~~g~~~nTlii~ts 31 (107)
+.+..|++.+++.|..++|+||+.+
T Consensus 197 ~Ev~e~~~~~~~~g~m~rtvvV~~t 221 (469)
T 2c61_A 197 EEAQYFMSDFEKTGALERAVVFLNL 221 (469)
T ss_dssp HHHHHHHHHHHHHSGGGGEEEEEEE
T ss_pred HHHHHHHHHHHhccCccceEEEEEC
Confidence 4577899999999999999888765
No 63
>3bcz_A Protein MEMO1; alpha/beta structure, peptide binding protein; 2.10A {Homo sapiens} PDB: 3bd0_A
Probab=31.27 E-value=68 Score=21.52 Aligned_cols=28 Identities=18% Similarity=0.221 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHhCCCCCeEEEEEcCCCCC
Q psy7399 6 DESVGRVIQSLEEEGLLGNSLVVFISDNGGP 36 (107)
Q Consensus 6 D~~ig~l~~~l~~~g~~~nTlii~tsDHG~~ 36 (107)
.+.+|+.+..+-+. .+++||++||....
T Consensus 162 ~~~~g~~l~~~~~~---~~~l~V~SsDlsH~ 189 (293)
T 3bcz_A 162 EQEFGKLFSKYLAD---PSNLFVVSSDFCHW 189 (293)
T ss_dssp HHHHHHHHHHHHTC---TTEEEEEECCCCEE
T ss_pred HHHHHHHHHHHHhC---CCeEEEEeCCccCC
Confidence 45788888766543 17999999997654
No 64
>3fiq_A OBP1, RCG36470, odorant-binding protein 1F; lipocalin, oderant-binding protein, transport protein; 1.60A {Rattus norvegicus} SCOP: b.60.1.0
Probab=29.82 E-value=29 Score=20.76 Aligned_cols=25 Identities=8% Similarity=0.054 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHhCCCCCeEEEEE
Q psy7399 6 DESVGRVIQSLEEEGLLGNSLVVFI 30 (107)
Q Consensus 6 D~~ig~l~~~l~~~g~~~nTlii~t 30 (107)
++.+.+|.+..++.|+.++.|+++.
T Consensus 126 ~e~~e~F~~~~~~~Gl~~enI~~~~ 150 (157)
T 3fiq_A 126 KAQKQELRKLAEEYNIPNENTQHLV 150 (157)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCEECG
T ss_pred HHHHHHHHHHHHHcCCCHHHEEeCC
Confidence 5678999999999999988877654
No 65
>1nw9_B Caspase 9, apoptosis-related cysteine protease; XIAP, caspase inhibition, caspase activation, dimerization; 2.40A {Homo sapiens} SCOP: c.17.1.1 PDB: 1jxq_A* 2ar9_A
Probab=29.50 E-value=44 Score=22.26 Aligned_cols=27 Identities=26% Similarity=0.393 Sum_probs=15.2
Q ss_pred HHHHHHHHHHh--CCCCCeEEEEEcCCCCC
Q psy7399 9 VGRVIQSLEEE--GLLGNSLVVFISDNGGP 36 (107)
Q Consensus 9 ig~l~~~l~~~--g~~~nTlii~tsDHG~~ 36 (107)
+.+.++.+.+. .-.+-.+++|.| ||..
T Consensus 73 m~~~l~~~~~~~h~~~D~~vv~ilS-HG~~ 101 (277)
T 1nw9_B 73 MVLALLELARQDHGALDCCVVVILS-HGCQ 101 (277)
T ss_dssp HHHHHHHHHHSCCTTCSEEEEEEEE-EEEC
T ss_pred HHHHHHHHHHhhcccCCeEEEEEeC-CCCc
Confidence 34444444433 334556777777 9976
No 66
>1e5p_A Aphrodisin; lipocalin, pheromone, hamster,; HET: MSE; 1.63A {Mesocricetus auratus} SCOP: b.60.1.1
Probab=29.47 E-value=41 Score=19.67 Aligned_cols=25 Identities=12% Similarity=0.143 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHhCCCCCeEEEEE
Q psy7399 6 DESVGRVIQSLEEEGLLGNSLVVFI 30 (107)
Q Consensus 6 D~~ig~l~~~l~~~g~~~nTlii~t 30 (107)
++.+.+|.+.+++.|+..+-++.+.
T Consensus 120 ~e~~~~f~~~~~~~G~~~~~ii~~~ 144 (151)
T 1e5p_A 120 PEENEILVQFAHEKKIPVENILNIL 144 (151)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEECG
T ss_pred HHHHHHHHHHHHHcCCCHHHEEECC
Confidence 5678999999999999887776543
No 67
>3od5_A Caspase-6; caspase domain, apoptotic protease, hydrolase-hydrolase INHI complex; 1.60A {Homo sapiens} SCOP: c.17.1.0 PDB: 3k7e_A 3s70_A 3v6m_A 3v6l_A 3nr2_A 4fxo_A 2wdp_A 3nkf_A 3s8e_A 4ejf_A 3qnw_A* 3p4u_A* 3p45_B 3qnw_B* 3p4u_B*
Probab=29.25 E-value=65 Score=21.52 Aligned_cols=26 Identities=19% Similarity=0.137 Sum_probs=14.8
Q ss_pred HHHHHHHHHh--CCCCCeEEEEEcCCCCC
Q psy7399 10 GRVIQSLEEE--GLLGNSLVVFISDNGGP 36 (107)
Q Consensus 10 g~l~~~l~~~--g~~~nTlii~tsDHG~~ 36 (107)
.+.++.+.+. .-.+-.+++|.| ||..
T Consensus 74 ~~~l~~~~~~~h~~~d~~vv~ilS-HG~~ 101 (278)
T 3od5_A 74 LLKIHEVSTVSHADADCFVCVFLS-HGEG 101 (278)
T ss_dssp HHHHHHHHHSCCTTBSCEEEEEES-CEET
T ss_pred HHHHHHHHhhcccCCCEEEEEEEC-CCCC
Confidence 3334444333 445667777777 9974
No 68
>3i41_A Beta-hemolysin; beta toxin, sphingomyelinase, toxin; 1.75A {Staphylococcus aureus} PDB: 3i46_A 3i48_A 3i5v_A* 3k55_A
Probab=29.01 E-value=47 Score=22.10 Aligned_cols=32 Identities=9% Similarity=0.078 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHhCCCCCeEEEEEcCCCCCC
Q psy7399 6 DESVGRVIQSLEEEGLLGNSLVVFISDNGGPT 37 (107)
Q Consensus 6 D~~ig~l~~~l~~~g~~~nTlii~tsDHG~~~ 37 (107)
..++..|.+.+++.....+.-+|+++|--...
T Consensus 188 ~~q~~~l~~~i~~~~~~~~~pvIl~GDfN~~~ 219 (317)
T 3i41_A 188 AEQMKEISDFVKKKNIPKDETVYIGGDLNVNK 219 (317)
T ss_dssp HHHHHHHHHHHHHHTCCTTSCEEEEEECCCCT
T ss_pred HHHHHHHHHHHHHhccCCCCeEEEEeECCCCC
Confidence 35677888888876554566788899976655
No 69
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=28.73 E-value=65 Score=25.54 Aligned_cols=24 Identities=17% Similarity=0.219 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHhCCCCCeEEEEEcCCC
Q psy7399 8 SVGRVIQSLEEEGLLGNSLVVFISDNG 34 (107)
Q Consensus 8 ~ig~l~~~l~~~g~~~nTlii~tsDHG 34 (107)
...+.+++|++.|+ .++++|+||-
T Consensus 539 ea~~aI~~l~~aGI---~v~MiTGD~~ 562 (920)
T 1mhs_A 539 DTYKTVCEAKTLGL---SIKMLTGDAV 562 (920)
T ss_dssp HHHHHHHHHHHHTC---EEEEEESSCH
T ss_pred cHHHHHHHHhhcCc---eEEEEcCCCH
Confidence 45678899999998 4889999994
No 70
>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae}
Probab=27.85 E-value=70 Score=22.35 Aligned_cols=29 Identities=31% Similarity=0.407 Sum_probs=18.8
Q ss_pred HHHHHHHHHHhCCCCCeEEEEEcCCCCCC
Q psy7399 9 VGRVIQSLEEEGLLGNSLVVFISDNGGPT 37 (107)
Q Consensus 9 ig~l~~~l~~~g~~~nTlii~tsDHG~~~ 37 (107)
|.+-++.|-+.---+++++++.|=||...
T Consensus 114 I~~aL~~L~~~a~pgD~llfYFSGHG~q~ 142 (350)
T 4f6o_A 114 MIRAMQWLVKDAQPNDSLFLHYSGHGGQT 142 (350)
T ss_dssp HHHHHHHHHTTCCTTCEEEEEEESCEEEC
T ss_pred HHHHHHHHHHhCCCCCEEEEEEcCCceec
Confidence 33334444443335789999999999754
No 71
>4af8_A Metacaspase MCA2; hydrolase, cysteine peptidase, caspase/hemoglobin fold; 1.40A {Trypanosoma brucei} PDB: 4afp_A 4afv_A 4afr_A
Probab=27.77 E-value=81 Score=22.20 Aligned_cols=29 Identities=21% Similarity=0.277 Sum_probs=19.8
Q ss_pred HHHHHHHHHHhCCCCCeEEEEEcCCCCCC
Q psy7399 9 VGRVIQSLEEEGLLGNSLVVFISDNGGPT 37 (107)
Q Consensus 9 ig~l~~~l~~~g~~~nTlii~tsDHG~~~ 37 (107)
|.+-+++|-+.--.+++++++.|=||...
T Consensus 154 I~~aL~~L~~~a~pgD~l~fyFSGHG~q~ 182 (367)
T 4af8_A 154 IVRYMAWLVKDAKPGDVLFFHYSGHGTQC 182 (367)
T ss_dssp HHHHHHHHHHTCCTTCEEEEEEESCEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEEEEcCCcCcc
Confidence 44445555444445789999999999754
No 72
>3h11_B Caspase-8; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} SCOP: c.17.1.1 PDB: 2k7z_A 1i4e_B 2fun_B 2c2z_B*
Probab=27.15 E-value=78 Score=21.05 Aligned_cols=27 Identities=7% Similarity=0.172 Sum_probs=15.0
Q ss_pred HHHHHHHHHHh--CCCCCeEEEEEcCCCCC
Q psy7399 9 VGRVIQSLEEE--GLLGNSLVVFISDNGGP 36 (107)
Q Consensus 9 ig~l~~~l~~~--g~~~nTlii~tsDHG~~ 36 (107)
+.+.++.+.+. .-.+-.+++|.| ||..
T Consensus 76 m~~~l~~~~~~~h~~~d~~v~~ilS-HG~~ 104 (271)
T 3h11_B 76 IYEILKIYQLMDHSNMDCFICCILS-HGDK 104 (271)
T ss_dssp HHHHHHHHHHSCCTTCSCEEEEEES-CEET
T ss_pred HHHHHHHHHHhcCCCCCEEEEEEEc-CCcC
Confidence 33444444443 334556667777 9975
No 73
>2kc2_A Talin-1, F1; FERM, adhesion, cell membrane, cell projection, cytoplasm, cytoskeleton, membrane, phosphoprotein, structural protein; NMR {Mus musculus}
Probab=26.21 E-value=81 Score=18.72 Aligned_cols=39 Identities=13% Similarity=0.009 Sum_probs=30.3
Q ss_pred cEEEEcCCCCC-CeeeccceehhhHHHHHHHHhCCCCCCC
Q psy7399 68 VAALWSPLLRK-GQVLENLMHITDWLPTLYFIAGKEKNID 106 (107)
Q Consensus 68 P~ii~~p~~~~-~~~~~~~~~~~Di~pTil~l~gi~~~~~ 106 (107)
|+.|+-|+..- ...++.-.....+..+||.-+||..+.+
T Consensus 13 ~LkV~llDg~~ktl~VD~S~~V~~lv~~Ic~kigI~n~~e 52 (128)
T 2kc2_A 13 PLKIRMLDGTVKTIMVDDSKTVTDMLMTICARIGITNHDE 52 (128)
T ss_dssp EEEEECTTSCEEEEEEEECSSHHHHHHHHHHHHTCCCCSS
T ss_pred cEEEEcCCCCEEEEEeCCCcCHHHHHHHHHHHhCCCCccc
Confidence 78888886544 4456777778899999999999987643
No 74
>1fx0_A ATP synthase alpha chain; latent ATPase, thermal stability, potential tentoxin binding hydrolase; 3.20A {Spinacia oleracea} SCOP: a.69.1.1 b.49.1.1 c.37.1.11 PDB: 1kmh_A*
Probab=26.03 E-value=40 Score=24.88 Aligned_cols=25 Identities=28% Similarity=0.488 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHhCCCCCeEEEEEc
Q psy7399 7 ESVGRVIQSLEEEGLLGNSLVVFIS 31 (107)
Q Consensus 7 ~~ig~l~~~l~~~g~~~nTlii~ts 31 (107)
+.+..+++.+++.|..++|+||+.+
T Consensus 204 ~Ev~~~~~~~~~~g~m~rtvvV~at 228 (507)
T 1fx0_A 204 SSVAQVVTNFQERGAMEYTIVVAET 228 (507)
T ss_dssp HHHHHHHHHTGGGTGGGSEEEEEEC
T ss_pred hHHHHHHHHHHhcCccccceEEEEC
Confidence 4577899999999999999888765
No 75
>1bj7_A D 2; allergen, lipocalin; 1.80A {Bos taurus} SCOP: b.60.1.1
Probab=25.83 E-value=51 Score=19.38 Aligned_cols=25 Identities=20% Similarity=0.250 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHhCCCCCeEEEEE
Q psy7399 6 DESVGRVIQSLEEEGLLGNSLVVFI 30 (107)
Q Consensus 6 D~~ig~l~~~l~~~g~~~nTlii~t 30 (107)
++.+.+|.+.+++.|+..+-++.+.
T Consensus 125 ~e~~~~f~~~~~~~G~~~~~i~~~~ 149 (156)
T 1bj7_A 125 PEELEKYQQLNSERGVPNENIENLI 149 (156)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEECG
T ss_pred HHHHHHHHHHHHHcCCCHHHEEecC
Confidence 5678999999999999887776543
No 76
>1xwj_B Talin, metavinculin; cell adhesion/protein binding complex; 2.60A {Gallus gallus} PDB: 1rkc_B
Probab=25.80 E-value=32 Score=14.38 Aligned_cols=15 Identities=27% Similarity=0.578 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHH
Q psy7399 3 KSLDESVGRVIQSLE 17 (107)
Q Consensus 3 ~~~D~~ig~l~~~l~ 17 (107)
+.+.+.|.+++..|+
T Consensus 11 r~v~ekV~~vlaaLq 25 (26)
T 1xwj_B 11 RKVSEKVSHVLAALQ 25 (26)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhh
Confidence 456777788877764
No 77
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=25.35 E-value=46 Score=23.31 Aligned_cols=28 Identities=14% Similarity=0.250 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEEEc
Q psy7399 4 SLDESVGRVIQSLEEEGLLGNSLVVFIS 31 (107)
Q Consensus 4 ~~D~~ig~l~~~l~~~g~~~nTlii~ts 31 (107)
.||-.|+.+-+.|++.|...|+.|+=.|
T Consensus 181 MMDGrV~aIR~aLd~~G~~~~v~ImsYs 208 (342)
T 1h7n_A 181 MIDGRIRDIKRGLINANLAHKTFVLSYA 208 (342)
T ss_dssp CCTTHHHHHHHHHHHTTCTTTCEEEEEE
T ss_pred ccccHHHHHHHHHHHCCCccCceEeech
Confidence 3688999999999999986777776554
No 78
>3oaa_G ATP synthase gamma chain; rossmann fold, hydrolase, hydrolase-transport PROT complex; HET: ANP ADP; 3.26A {Escherichia coli DH1}
Probab=24.71 E-value=32 Score=23.21 Aligned_cols=13 Identities=23% Similarity=0.217 Sum_probs=10.9
Q ss_pred eEEEEEcCCCCCC
Q psy7399 25 SLVVFISDNGGPT 37 (107)
Q Consensus 25 Tlii~tsDHG~~~ 37 (107)
-+||||||.|-+.
T Consensus 76 ~~IvitSDrGLcG 88 (286)
T 3oaa_G 76 GYLVVSTDRGLCG 88 (286)
T ss_dssp EEEEECCSCCCST
T ss_pred EEEEEeCCccccc
Confidence 4788999999874
No 79
>2cz4_A Hypothetical protein TTHA0516; conserved hypothetical protein, PII-like signaling protein, structural genomics, NPPSFA; 1.93A {Thermus thermophilus} SCOP: d.58.5.1
Probab=24.70 E-value=82 Score=18.25 Aligned_cols=27 Identities=22% Similarity=0.453 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHhCCCCCeEEEEEcC
Q psy7399 6 DESVGRVIQSLEEEGLLGNSLVVFISD 32 (107)
Q Consensus 6 D~~ig~l~~~l~~~g~~~nTlii~tsD 32 (107)
|+.+.++++.+++.-.-.+.-.||.+|
T Consensus 83 de~ve~vv~~I~~~~~tg~~GkIFV~~ 109 (119)
T 2cz4_A 83 EEVALRILQRLQEEYFPHYAVIAYVEN 109 (119)
T ss_dssp HHHHHHHHHHHHHHTTTTSCCEEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEEEE
Confidence 677888888888554433334555553
No 80
>1fs0_G ATP synthase gamma subunit; coiled coil, epsilon, hydrolase; 2.10A {Escherichia coli} SCOP: c.49.2.1
Probab=24.68 E-value=31 Score=22.35 Aligned_cols=13 Identities=23% Similarity=0.217 Sum_probs=11.0
Q ss_pred eEEEEEcCCCCCC
Q psy7399 25 SLVVFISDNGGPT 37 (107)
Q Consensus 25 Tlii~tsDHG~~~ 37 (107)
.+||||||.|-+.
T Consensus 59 ~~IvitSDrGLcG 71 (230)
T 1fs0_G 59 GYLVVSTDRGLCG 71 (230)
T ss_dssp EEEEECCSSSCST
T ss_pred EEEEEeCCccccc
Confidence 4889999999874
No 81
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=24.36 E-value=1.4e+02 Score=21.12 Aligned_cols=33 Identities=24% Similarity=0.324 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCC
Q psy7399 3 KSLDESVGRVIQSLEEEGLLGNSLVVFISDNGG 35 (107)
Q Consensus 3 ~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~ 35 (107)
.++++.+.++-..|++.|+.....|.+..+++.
T Consensus 33 ~el~~~~~~~A~~L~~~Gv~~gd~V~i~~~~~~ 65 (504)
T 1t5h_X 33 AELRARVEAVAARLHADGLRPQQRVAVVAPNSA 65 (504)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCH
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH
Confidence 578899999999999999987778888887764
No 82
>3oee_G ATP synthase subunit gamma; ATP phosphatase, F1F0 ATPase, ATP synthesis, H ADP, PO4, mitochondria; HET: ANP; 2.74A {Saccharomyces cerevisiae} SCOP: c.49.2.0 PDB: 2wpd_G* 3fks_G 2hld_G* 3oeh_G* 3ofn_G* 3zry_G* 4b2q_G* 3oe7_G*
Probab=24.22 E-value=33 Score=23.05 Aligned_cols=14 Identities=29% Similarity=0.268 Sum_probs=11.3
Q ss_pred CeEEEEEcCCCCCC
Q psy7399 24 NSLVVFISDNGGPT 37 (107)
Q Consensus 24 nTlii~tsDHG~~~ 37 (107)
.-+|+||||.|-+.
T Consensus 72 ~~~IvitSDrGLcG 85 (278)
T 3oee_G 72 ELIVAITSDKGLCG 85 (278)
T ss_dssp EEEEEECCSCCCST
T ss_pred EEEEEEeCCccccc
Confidence 35789999999874
No 83
>1b4a_A Arginine repressor; helix turn helix; 2.50A {Geobacillus stearothermophilus} SCOP: a.4.5.3 d.74.2.1 PDB: 1f9n_A
Probab=23.75 E-value=55 Score=19.87 Aligned_cols=25 Identities=8% Similarity=0.415 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHhCCC-----CCeEEEEEcC
Q psy7399 8 SVGRVIQSLEEEGLL-----GNSLVVFISD 32 (107)
Q Consensus 8 ~ig~l~~~l~~~g~~-----~nTlii~tsD 32 (107)
.++.+++.++-.++. |+|++|++.|
T Consensus 105 ~va~~iD~~~~~eIlGTIAGDDTIlvi~r~ 134 (149)
T 1b4a_A 105 AIGVLLDNLDWDEIVGTICGDDTCLIICRT 134 (149)
T ss_dssp HHHHHHHHHTCTTEEEEEECSSEEEEEESS
T ss_pred HHHHHHHhCCCCCeEEEEecCCEEEEEeCC
Confidence 466777776654432 7898888765
No 84
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=23.70 E-value=70 Score=25.20 Aligned_cols=24 Identities=13% Similarity=0.123 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHhCCCCCeEEEEEcCCC
Q psy7399 8 SVGRVIQSLEEEGLLGNSLVVFISDNG 34 (107)
Q Consensus 8 ~ig~l~~~l~~~g~~~nTlii~tsDHG 34 (107)
...+.+++|++.|+. ++++|+||-
T Consensus 492 ~a~~aI~~l~~aGI~---v~MiTGD~~ 515 (885)
T 3b8c_A 492 DSAETIRRALNLGVN---VKMITGDQL 515 (885)
T ss_dssp HHHHHHHHHHHTTCC---CEEEESSCH
T ss_pred hHHHHHHHHHHcCCc---EEEEcCCCh
Confidence 456788999999983 788999995
No 85
>1oeg_A Apolipoprotein E; sialic acid, heparin-binding, repeat, signal, disease mutation, polymorphism; NMR {Homo sapiens} SCOP: j.39.1.1
Probab=23.62 E-value=42 Score=14.23 Aligned_cols=17 Identities=0% Similarity=0.259 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHHHh
Q psy7399 3 KSLDESVGRVIQSLEEE 19 (107)
Q Consensus 3 ~~~D~~ig~l~~~l~~~ 19 (107)
+.+-+++..+++++++.
T Consensus 4 e~mr~Q~~~lveKvq~a 20 (26)
T 1oeg_A 4 EDMQRQWAGLVEKVQAA 20 (26)
T ss_dssp HHTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 45567888999999875
No 86
>4f1h_A Tyrosyl-DNA phosphodiesterase 2; hydrolase-DNA complex; HET: DNA; 1.66A {Danio rerio} PDB: 4fpv_A* 4f1h_B*
Probab=23.52 E-value=99 Score=18.57 Aligned_cols=27 Identities=22% Similarity=0.422 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHhCCCCCeEEEEEcCCCC
Q psy7399 7 ESVGRVIQSLEEEGLLGNSLVVFISDNGG 35 (107)
Q Consensus 7 ~~ig~l~~~l~~~g~~~nTlii~tsDHG~ 35 (107)
+++..+++.+++. .++.-+|+++|--.
T Consensus 129 ~q~~~~~~~l~~~--~~~~pvIl~GDfN~ 155 (250)
T 4f1h_A 129 KQLRVVLQKIKEA--PEDAIVIFAGDTNL 155 (250)
T ss_dssp HHHHHHHHHHHHS--CTTEEEEEEEECCC
T ss_pred HHHHHHHHHHHhc--CCCCCEEEEEecCC
Confidence 4677788888764 34567889999654
No 87
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=23.24 E-value=1.7e+02 Score=20.91 Aligned_cols=35 Identities=23% Similarity=0.184 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCCCC
Q psy7399 3 KSLDESVGRVIQSLEEEGLLGNSLVVFISDNGGPT 37 (107)
Q Consensus 3 ~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~~~ 37 (107)
+++++.+.++-..|++.|+.....|.+..+++...
T Consensus 54 ~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~ 88 (550)
T 3rix_A 54 AEYFEMSVRLAEAMKRYGLNTNHRIVVCSENSLQF 88 (550)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTCEEEEECSSCTTT
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcccH
Confidence 57899999999999999998888888888887654
No 88
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=23.04 E-value=99 Score=16.66 Aligned_cols=26 Identities=15% Similarity=0.098 Sum_probs=17.2
Q ss_pred HHHHHHHHhCCCCCeEEEEEcCCCCC
Q psy7399 11 RVIQSLEEEGLLGNSLVVFISDNGGP 36 (107)
Q Consensus 11 ~l~~~l~~~g~~~nTlii~tsDHG~~ 36 (107)
.+++.+++.....++-||+.+++...
T Consensus 64 ~~~~~l~~~~~~~~~~ii~~s~~~~~ 89 (127)
T 3i42_A 64 ALVKQLRALPMEKTSKFVAVSGFAKN 89 (127)
T ss_dssp HHHHHHHHSCCSSCCEEEEEECC-CT
T ss_pred HHHHHHHhhhccCCCCEEEEECCcch
Confidence 56778887655566777777766543
No 89
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=22.76 E-value=76 Score=21.19 Aligned_cols=25 Identities=24% Similarity=0.359 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHhCCCCCeEEEEEc
Q psy7399 7 ESVGRVIQSLEEEGLLGNSLVVFIS 31 (107)
Q Consensus 7 ~~ig~l~~~l~~~g~~~nTlii~ts 31 (107)
..+.++++.|++.|+.++..|++.+
T Consensus 198 ~~~~~~i~~L~~~g~~~~i~vivGG 222 (262)
T 1xrs_B 198 QNMTHLIELLEAEGLRDRFVLLCGG 222 (262)
T ss_dssp HHHHHHHHHHHHTTCGGGSEEEEEC
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEC
Confidence 4678899999999988777776654
No 90
>3lap_A Arginine repressor; arginine repressor, DNA binding, DNA-canavanine ternary complex; HET: GGB; 2.15A {Mycobacterium tuberculosis} PDB: 3fhz_A* 3ere_D* 3laj_A*
Probab=22.72 E-value=58 Score=20.31 Aligned_cols=26 Identities=8% Similarity=0.204 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHhCCC-----CCeEEEEEcCC
Q psy7399 8 SVGRVIQSLEEEGLL-----GNSLVVFISDN 33 (107)
Q Consensus 8 ~ig~l~~~l~~~g~~-----~nTlii~tsDH 33 (107)
.|+.+++.+.-.++. |||++|++.|-
T Consensus 126 ~vA~~iD~~~~~eIlGTIAGDDTIlVi~r~~ 156 (170)
T 3lap_A 126 YLASAIDRAALPQVVGTIAGDDTILVVAREP 156 (170)
T ss_dssp HHHHHHHHHTCTTEEEEEECSSEEEEEECTT
T ss_pred HHHHHHHhCCCCCeEEEEecCCEEEEEeCCH
Confidence 466677766544432 78999988754
No 91
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=22.67 E-value=1.5e+02 Score=21.42 Aligned_cols=33 Identities=24% Similarity=0.275 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCC
Q psy7399 3 KSLDESVGRVIQSLEEEGLLGNSLVVFISDNGG 35 (107)
Q Consensus 3 ~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~ 35 (107)
+++++.+.++-..|++.|+.....|.+..+++.
T Consensus 104 ~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~ 136 (570)
T 4gr5_A 104 GALNERANRLAHRLVGLGVAPGTLVGVHLERGF 136 (570)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSH
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCH
Confidence 578999999999999999988888888888874
No 92
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=22.45 E-value=74 Score=17.40 Aligned_cols=24 Identities=8% Similarity=0.386 Sum_probs=14.3
Q ss_pred HHHHHHHHhCCCCCeEEEEEcCCC
Q psy7399 11 RVIQSLEEEGLLGNSLVVFISDNG 34 (107)
Q Consensus 11 ~l~~~l~~~g~~~nTlii~tsDHG 34 (107)
.+++.+++.....++-||+.|.+.
T Consensus 68 ~~~~~lr~~~~~~~~pii~~s~~~ 91 (129)
T 3h1g_A 68 DLVKKVRSDSRFKEIPIIMITAEG 91 (129)
T ss_dssp HHHHHHHTSTTCTTCCEEEEESCC
T ss_pred HHHHHHHhcCCCCCCeEEEEeCCC
Confidence 566777765554555555565444
No 93
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=22.36 E-value=92 Score=16.04 Aligned_cols=25 Identities=16% Similarity=0.094 Sum_probs=13.2
Q ss_pred HHHHHHHHhCCCCCeEEEEEcCCCC
Q psy7399 11 RVIQSLEEEGLLGNSLVVFISDNGG 35 (107)
Q Consensus 11 ~l~~~l~~~g~~~nTlii~tsDHG~ 35 (107)
++.+.+++.+...++-||++...|.
T Consensus 28 ~l~~~~~~l~~~~~~~ivv~C~~g~ 52 (85)
T 2jtq_A 28 EVKERIATAVPDKNDTVKVYCNAGR 52 (85)
T ss_dssp HHHHHHHHHCCCTTSEEEEEESSSH
T ss_pred HHHHHHHHhCCCCCCcEEEEcCCCc
Confidence 3445556655554555555555553
No 94
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=22.36 E-value=1.6e+02 Score=20.85 Aligned_cols=33 Identities=24% Similarity=0.231 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCC
Q psy7399 3 KSLDESVGRVIQSLEEEGLLGNSLVVFISDNGG 35 (107)
Q Consensus 3 ~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~ 35 (107)
+++++.+.++-..|.+.|+.....|.+..+++.
T Consensus 32 ~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~ 64 (503)
T 4fuq_A 32 AELVARAGRVANVLVARGLQVGDRVAAQTEKSV 64 (503)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCH
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH
Confidence 578999999999999999988888888888875
No 95
>2ve8_A FTSK, DNA translocase FTSK; nucleotide-binding, chromosome partition, ATP-binding, DNA-binding, winged helix, bacterial cell division; HET: DNA; 1.4A {Pseudomonas aeruginosa} SCOP: a.4.5.67 PDB: 2ve9_A* 2j5o_A*
Probab=22.25 E-value=52 Score=17.61 Aligned_cols=13 Identities=31% Similarity=0.680 Sum_probs=10.9
Q ss_pred HHHHHHHHHHhCC
Q psy7399 9 VGRVIQSLEEEGL 21 (107)
Q Consensus 9 ig~l~~~l~~~g~ 21 (107)
-++|++.|++.|+
T Consensus 41 AArlid~lE~~Gi 53 (73)
T 2ve8_A 41 AARMIEAMEMAGV 53 (73)
T ss_dssp HHHHHHHHHHTTS
T ss_pred HHHHHHHHHHCCc
Confidence 3689999999984
No 96
>1zke_A Hypothetical protein HP1531; layer of helix-turn-helix, structural G PSI, protein structure initiative, midwest center for struc genomics; 1.60A {Helicobacter pylori} SCOP: a.30.6.1
Probab=22.02 E-value=4.2 Score=22.16 Aligned_cols=19 Identities=21% Similarity=0.326 Sum_probs=13.8
Q ss_pred hHHHHHHHHHHHHHHHHhC
Q psy7399 2 LKSLDESVGRVIQSLEEEG 20 (107)
Q Consensus 2 i~~~D~~ig~l~~~l~~~g 20 (107)
...+|.+|.++-+.++..+
T Consensus 54 ~~QideeV~~LKe~IdaLN 72 (83)
T 1zke_A 54 FTQLSEEVERLKELINALN 72 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4678888888877766543
No 97
>2l9w_A U4/U6 snRNA-associated-splicing factor PRP24; RRM, U6 snRNP, RNA binding protein; NMR {Saccharomyces cerevisiae}
Probab=21.95 E-value=1e+02 Score=18.03 Aligned_cols=32 Identities=13% Similarity=0.096 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHhCCCCCeEEEEEcCCCCCC
Q psy7399 6 DESVGRVIQSLEEEGLLGNSLVVFISDNGGPT 37 (107)
Q Consensus 6 D~~ig~l~~~l~~~g~~~nTlii~tsDHG~~~ 37 (107)
|.+|..|++..-.....+=+=|++.+|||...
T Consensus 35 darIr~lve~~~~i~~g~i~KI~L~pDH~GAi 66 (117)
T 2l9w_A 35 PSLICQFLQEEIHINEKDIRKILLVSDFNGAI 66 (117)
T ss_dssp HHHHHHHHHHHTCCCTTTCSEEEEETTTTEEE
T ss_pred HHHHHHHHhhhhccCccceeEEEEecCCCceE
Confidence 66777777765222112225688999999775
No 98
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=21.93 E-value=1.6e+02 Score=20.91 Aligned_cols=34 Identities=15% Similarity=0.214 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCCC
Q psy7399 3 KSLDESVGRVIQSLEEEGLLGNSLVVFISDNGGP 36 (107)
Q Consensus 3 ~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~~ 36 (107)
.++++.+.++-..|++.|+.....|.+...++..
T Consensus 52 ~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~ 85 (529)
T 2v7b_A 52 GELEERARRFASALRTLGVHPEERILLVMLDTVA 85 (529)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSTH
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHH
Confidence 5789999999999999999877778888877753
No 99
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=21.88 E-value=94 Score=16.89 Aligned_cols=24 Identities=21% Similarity=0.282 Sum_probs=16.0
Q ss_pred HHHHHHHHhCCCCCeEEEEEcCCC
Q psy7399 11 RVIQSLEEEGLLGNSLVVFISDNG 34 (107)
Q Consensus 11 ~l~~~l~~~g~~~nTlii~tsDHG 34 (107)
.+++.+++.....++-||+.|.+.
T Consensus 64 ~~~~~l~~~~~~~~~pii~~s~~~ 87 (133)
T 3nhm_A 64 ALCGHFRSEPTLKHIPVIFVSGYA 87 (133)
T ss_dssp HHHHHHHHSTTTTTCCEEEEESCC
T ss_pred HHHHHHHhCCccCCCCEEEEeCCC
Confidence 577888887655566666666554
No 100
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=21.83 E-value=1.1e+02 Score=19.75 Aligned_cols=25 Identities=24% Similarity=0.353 Sum_probs=16.9
Q ss_pred HHHHHHHHhCCCCCeEEEEEcCCCC
Q psy7399 11 RVIQSLEEEGLLGNSLVVFISDNGG 35 (107)
Q Consensus 11 ~l~~~l~~~g~~~nTlii~tsDHG~ 35 (107)
.|-+.+.+.|+..++.||++.+.|.
T Consensus 68 ~~~~~~~~~gi~~~~~vvvyc~~g~ 92 (271)
T 1e0c_A 68 QLESLFGELGHRPEAVYVVYDDEGG 92 (271)
T ss_dssp HHHHHHHHHTCCTTCEEEEECSSSS
T ss_pred HHHHHHHHcCCCCCCeEEEEcCCCC
Confidence 3445566667777777777777775
No 101
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=21.64 E-value=1.7e+02 Score=20.67 Aligned_cols=33 Identities=18% Similarity=0.260 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCC
Q psy7399 3 KSLDESVGRVIQSLEEEGLLGNSLVVFISDNGG 35 (107)
Q Consensus 3 ~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~ 35 (107)
+++++.+.++-..|++.|+.....|.+..+++.
T Consensus 35 ~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~ 67 (509)
T 3ivr_A 35 RDYLARAERLASGLLRDGVHTGDRVAILSQNCS 67 (509)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCH
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH
Confidence 578999999999999999988778888887764
No 102
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=21.61 E-value=1.6e+02 Score=21.56 Aligned_cols=33 Identities=15% Similarity=0.242 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCC
Q psy7399 3 KSLDESVGRVIQSLEEEGLLGNSLVVFISDNGG 35 (107)
Q Consensus 3 ~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~ 35 (107)
+++++...++-..|++.|+.....|.+..+++.
T Consensus 54 ~eL~~~a~~lA~~L~~~Gv~~gd~V~l~~~~s~ 86 (617)
T 3rg2_A 54 RELNQAADNLACSLRRQGIKPGETALVQLGNVA 86 (617)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSH
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcH
Confidence 678999999999999999988888888888765
No 103
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=21.46 E-value=2e+02 Score=20.66 Aligned_cols=35 Identities=17% Similarity=0.144 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCCCC
Q psy7399 3 KSLDESVGRVIQSLEEEGLLGNSLVVFISDNGGPT 37 (107)
Q Consensus 3 ~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~~~ 37 (107)
.++++.+.++-..|++.|+.....|.+...++...
T Consensus 56 ~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~ 90 (548)
T 2d1s_A 56 AEYLEKSCCLGKALQNYGLVVDGRIALCSENCEEF 90 (548)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTCEEEEECSSCTTT
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhH
Confidence 57889999999999999998878888888887654
No 104
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=21.20 E-value=1.7e+02 Score=20.88 Aligned_cols=33 Identities=15% Similarity=0.167 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCC
Q psy7399 3 KSLDESVGRVIQSLEEEGLLGNSLVVFISDNGG 35 (107)
Q Consensus 3 ~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~ 35 (107)
+++++.+.++-..|++.|+.....|.+...++.
T Consensus 53 ~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~ 85 (576)
T 3gqw_A 53 QTLKARAEAGAKRLLSLNLKKGDRVALIAETSS 85 (576)
T ss_dssp HHHHHHHHHHHHHHHHTCCCTTCEEEEECCSSH
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH
Confidence 578999999999999999988778888887765
No 105
>3c1d_A Protein ORAA, regulatory protein RECX; tandem repeats, helix-turn-helix, cytoplasm, DNA damage, DNA repair, SOS response, DNA binding protein; 1.80A {Escherichia coli}
Probab=21.17 E-value=63 Score=19.51 Aligned_cols=21 Identities=38% Similarity=0.433 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCe
Q psy7399 5 LDESVGRVIQSLEEEGLLGNS 25 (107)
Q Consensus 5 ~D~~ig~l~~~l~~~g~~~nT 25 (107)
-+..|..+++.|++.|+.++.
T Consensus 45 ~~~~i~~vl~~l~~~g~ldD~ 65 (159)
T 3c1d_A 45 TAEDYERVIAWCHEHGYLDDS 65 (159)
T ss_dssp CHHHHHHHHHHHHHTTSCCHH
T ss_pred CHHHHHHHHHHHHHcCCcCHH
Confidence 457888999999999987654
No 106
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=20.71 E-value=1.7e+02 Score=20.81 Aligned_cols=33 Identities=12% Similarity=0.282 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCC
Q psy7399 3 KSLDESVGRVIQSLEEEGLLGNSLVVFISDNGG 35 (107)
Q Consensus 3 ~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~ 35 (107)
+++++.+.++-..|++.|+.....|.+..+++.
T Consensus 53 ~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~ 85 (536)
T 3ni2_A 53 ADVELTARRVASGLNKIGIQQGDVIMLFLPSSP 85 (536)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSH
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH
Confidence 578999999999999999988788888888764
No 107
>3sir_A Caspase; hydrolase; 2.68A {Drosophila melanogaster} PDB: 3sip_A
Probab=20.62 E-value=81 Score=20.79 Aligned_cols=26 Identities=23% Similarity=0.166 Sum_probs=13.1
Q ss_pred HHHHHHHHHh--CCCCCeEEEEEcCCCCC
Q psy7399 10 GRVIQSLEEE--GLLGNSLVVFISDNGGP 36 (107)
Q Consensus 10 g~l~~~l~~~--g~~~nTlii~tsDHG~~ 36 (107)
.+.++.+.+. .-.+-.+++|.| ||..
T Consensus 72 ~~~l~~~~~~~h~~~d~~v~~~ls-HG~~ 99 (259)
T 3sir_A 72 LRTIEYSASQNHSDSDCILVAILS-HGEM 99 (259)
T ss_dssp HHHHHHHHTSCCTTEEEEEEEEEE-CTTC
T ss_pred HHHHHHHHHhhccCCCEEEEEEec-CCCC
Confidence 3444444433 223445555666 9976
No 108
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=20.57 E-value=99 Score=24.52 Aligned_cols=24 Identities=29% Similarity=0.482 Sum_probs=20.0
Q ss_pred HHHHHHHHHHhCCCCCeEEEEEcCCCC
Q psy7399 9 VGRVIQSLEEEGLLGNSLVVFISDNGG 35 (107)
Q Consensus 9 ig~l~~~l~~~g~~~nTlii~tsDHG~ 35 (107)
+.+.+++|++.|+ .++++|+||-.
T Consensus 608 ~~~~I~~l~~~Gi---~v~miTGD~~~ 631 (995)
T 3ar4_A 608 VMGSIQLCRDAGI---RVIMITGDNKG 631 (995)
T ss_dssp HHHHHHHHHHTTC---EEEEEESSCHH
T ss_pred HHHHHHHHHHcCC---EEEEECCCCHH
Confidence 5678999999998 48899999853
No 109
>2v6z_M DNA polymerase epsilon subunit 2; DNA replication, DPOE2, transferase, AAA protein family; HET: DNA; NMR {Homo sapiens}
Probab=20.54 E-value=82 Score=17.86 Aligned_cols=22 Identities=23% Similarity=0.512 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCe
Q psy7399 4 SLDESVGRVIQSLEEEGLLGNS 25 (107)
Q Consensus 4 ~~D~~ig~l~~~l~~~g~~~nT 25 (107)
..++.|.++++.++++.+..|.
T Consensus 64 e~e~~L~~Iid~lqkq~LsS~~ 85 (99)
T 2v6z_M 64 ELEDKLEKIINAVEKQPLSSNM 85 (99)
T ss_dssp THHHHHHHHHHHHTTSCCSSSE
T ss_pred hHHHHHHHHHHHHHhCcCcccc
Confidence 4578899999999988865543
No 110
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=20.48 E-value=82 Score=17.09 Aligned_cols=24 Identities=21% Similarity=0.375 Sum_probs=14.7
Q ss_pred HHHHHHHHhCCCCCeEEEEEcCCC
Q psy7399 11 RVIQSLEEEGLLGNSLVVFISDNG 34 (107)
Q Consensus 11 ~l~~~l~~~g~~~nTlii~tsDHG 34 (107)
.+++++++.....++-||+.|.++
T Consensus 63 ~~~~~l~~~~~~~~~pii~~s~~~ 86 (122)
T 3gl9_A 63 TVLKKLQEKEEWKRIPVIVLTAKG 86 (122)
T ss_dssp HHHHHHHTSTTTTTSCEEEEESCC
T ss_pred HHHHHHHhcccccCCCEEEEecCC
Confidence 467777776555556566666544
No 111
>1vr8_A GTP binding regulator; TM1622, structural genomics, joint CE structural genomics, JCSG, protein structure initiative, PS signaling protein; 1.75A {Thermotoga maritima} SCOP: d.312.1.1
Probab=20.46 E-value=63 Score=19.49 Aligned_cols=13 Identities=31% Similarity=0.309 Sum_probs=11.3
Q ss_pred CCeEEEEEcCCCC
Q psy7399 23 GNSLVVFISDNGG 35 (107)
Q Consensus 23 ~nTlii~tsDHG~ 35 (107)
+|.++|+++++|.
T Consensus 114 dnWlFiisG~n~~ 126 (142)
T 1vr8_A 114 KNWLFIVEGKNGV 126 (142)
T ss_dssp TTEEEEEEESSCH
T ss_pred CcEEEEEECCccH
Confidence 7889999999974
No 112
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=20.36 E-value=1.2e+02 Score=20.78 Aligned_cols=24 Identities=25% Similarity=0.207 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHhCCCCCeEEEEEcCC
Q psy7399 8 SVGRVIQSLEEEGLLGNSLVVFISDN 33 (107)
Q Consensus 8 ~ig~l~~~l~~~g~~~nTlii~tsDH 33 (107)
.+..+++++++.. .|++++-.+|.
T Consensus 39 r~at~i~~~r~~~--~n~llld~GD~ 62 (339)
T 3jyf_A 39 RTASLIEQARAEV--KNSVLVDNGDV 62 (339)
T ss_dssp HHHHHHHHHHHTC--SCEEEEECSCC
T ss_pred HHHHHHHHHHhhC--CCEEEEECCCC
Confidence 4667888888764 68999988885
No 113
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=20.21 E-value=1.8e+02 Score=20.63 Aligned_cols=33 Identities=15% Similarity=0.214 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCC
Q psy7399 3 KSLDESVGRVIQSLEEEGLLGNSLVVFISDNGG 35 (107)
Q Consensus 3 ~~~D~~ig~l~~~l~~~g~~~nTlii~tsDHG~ 35 (107)
.++++.+.++-..|++.|+.....|.+..+++.
T Consensus 47 ~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~ 79 (517)
T 3r44_A 47 AQMNALANRCADVLTALGIAKGDRVALLMPNSV 79 (517)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSH
T ss_pred HHHHHHHHHHHHHHHHcCCCCcCEEEEEcCCCH
Confidence 578999999999999999988777888887765
No 114
>3s26_A Neutrophil gelatinase-associated lipocalin; beta-barrel, siderophore binding protein, N-linked glycosyla secreted, transport protein; HET: NAG BMA MAN; 1.80A {Mus musculus} SCOP: b.60.1.1 PDB: 2k23_A
Probab=20.19 E-value=99 Score=18.94 Aligned_cols=25 Identities=16% Similarity=0.223 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHhCCCCCeEEEEE
Q psy7399 6 DESVGRVIQSLEEEGLLGNSLVVFI 30 (107)
Q Consensus 6 D~~ig~l~~~l~~~g~~~nTlii~t 30 (107)
++.+.++.+.+++.|+..+-++...
T Consensus 148 ~e~~~~f~~~~~~~G~~~~~ii~~~ 172 (190)
T 3s26_A 148 PELKERFTRFAKSLGLKDDNIIFSV 172 (190)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHEEECC
Confidence 4678899999999999887776554
No 115
>3o22_A Prostaglandin-H2 D-isomerase; lipocalin, prostaglandin synthase; HET: OLA PLM; 1.40A {Homo sapiens} PDB: 3o19_A* 3o2y_A* 2wwp_A 2czt_A 2czu_A 2rq0_A 2e4j_A 2ktd_A*
Probab=20.11 E-value=77 Score=18.67 Aligned_cols=24 Identities=13% Similarity=0.249 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHhCCCCCeEEEE
Q psy7399 6 DESVGRVIQSLEEEGLLGNSLVVF 29 (107)
Q Consensus 6 D~~ig~l~~~l~~~g~~~nTlii~ 29 (107)
++.+.++.+.+++.|+..+-++.+
T Consensus 129 ~~~~~~f~~~~~~~G~~~~~i~~~ 152 (162)
T 3o22_A 129 AELKEKFTAFCKAQGFTEDTIVFL 152 (162)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHEEEC
Confidence 467889999999999987766544
No 116
>3ugs_B Undecaprenyl pyrophosphate synthase; niaid, csgid, structural genomics, center for structural GEN infectious diseases; HET: FFT; 2.46A {Campylobacter jejuni} SCOP: c.101.1.0
Probab=20.08 E-value=95 Score=20.32 Aligned_cols=27 Identities=22% Similarity=0.342 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHhCCCCCeEEEEEcCCC
Q psy7399 8 SVGRVIQSLEEEGLLGNSLVVFISDNG 34 (107)
Q Consensus 8 ~ig~l~~~l~~~g~~~nTlii~tsDHG 34 (107)
.+.++++.+.+.|+..=|+..|+++|=
T Consensus 38 ~~~~i~~~c~~lGI~~lTlYaFStENw 64 (225)
T 3ugs_B 38 TMQKLMEVCMEENISNLSLFAFSTENW 64 (225)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEESGGG
T ss_pred HHHHHHHHHHHcCCCEEEEEEEccccc
Confidence 567889999999998889999999874
Done!