Query psy74
Match_columns 134
No_of_seqs 106 out of 163
Neff 5.5
Searched_HMMs 29240
Date Fri Aug 16 17:14:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy74.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/74hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gxr_A ESG1, transducin-like e 94.9 0.66 2.3E-05 34.1 12.0 108 16-129 62-172 (337)
2 3jrp_A Fusion protein of prote 94.5 1 3.5E-05 33.6 12.4 105 17-128 69-190 (379)
3 3ei3_B DNA damage-binding prot 94.3 1.3 4.5E-05 33.8 13.2 108 18-131 87-196 (383)
4 4aez_A CDC20, WD repeat-contai 94.0 1.1 3.9E-05 34.9 12.0 105 17-129 271-380 (401)
5 3f3f_A Nucleoporin SEH1; struc 93.9 1.3 4.5E-05 32.1 13.8 108 16-129 22-143 (351)
6 1k8k_C P40, ARP2/3 complex 41 93.7 1.6 5.3E-05 32.7 12.0 119 3-129 3-127 (372)
7 3jrp_A Fusion protein of prote 93.4 1.8 6.2E-05 32.2 12.1 109 16-130 22-135 (379)
8 3i2n_A WD repeat-containing pr 93.4 1.7 5.9E-05 32.1 11.6 104 16-129 179-291 (357)
9 4e54_B DNA damage-binding prot 93.2 1.4 4.9E-05 34.9 11.6 107 18-130 133-241 (435)
10 2xyi_A Probable histone-bindin 93.2 1 3.6E-05 35.7 10.8 106 17-129 243-353 (430)
11 4aez_A CDC20, WD repeat-contai 93.1 2.4 8.2E-05 33.0 13.9 102 16-128 102-204 (401)
12 3odt_A Protein DOA1; ubiquitin 93.1 1.8 6.2E-05 31.4 13.9 101 16-126 28-130 (313)
13 3mkq_A Coatomer beta'-subunit; 92.7 0.61 2.1E-05 39.4 9.1 64 48-125 355-419 (814)
14 4g56_B MGC81050 protein; prote 92.6 2 6.8E-05 33.4 11.5 105 16-129 150-258 (357)
15 1ri6_A Putative isomerase YBHE 92.3 2.5 8.4E-05 31.1 11.5 63 16-85 48-114 (343)
16 1gxr_A ESG1, transducin-like e 92.3 2.4 8.3E-05 30.9 12.2 101 16-129 194-296 (337)
17 2xyi_A Probable histone-bindin 91.8 3.4 0.00011 32.7 12.0 106 18-129 141-263 (430)
18 2pm9_A Protein WEB1, protein t 91.7 3.4 0.00012 31.4 12.1 104 19-129 179-294 (416)
19 3vl1_A 26S proteasome regulato 91.7 3.6 0.00012 31.5 12.8 106 16-129 258-365 (420)
20 3ei3_B DNA damage-binding prot 91.7 3.5 0.00012 31.4 12.9 104 17-129 175-282 (383)
21 2pm9_A Protein WEB1, protein t 91.6 3 0.0001 31.7 11.2 107 17-129 79-197 (416)
22 1got_B GT-beta; complex (GTP-b 90.6 4.5 0.00016 30.7 13.1 97 24-129 75-173 (340)
23 3jro_A Fusion protein of prote 90.4 4.7 0.00016 34.9 12.5 111 14-130 18-133 (753)
24 3fm0_A Protein CIAO1; WDR39,SG 90.0 4.9 0.00017 30.7 11.1 108 16-129 27-136 (345)
25 1pgu_A Actin interacting prote 90.0 6.3 0.00022 31.6 12.6 105 16-129 499-614 (615)
26 1k8k_C P40, ARP2/3 complex 41 90.0 4.7 0.00016 30.0 12.5 106 17-128 108-232 (372)
27 3k26_A Polycomb protein EED; W 90.0 4.5 0.00016 29.8 12.2 103 19-129 86-192 (366)
28 1l0q_A Surface layer protein; 89.9 5.2 0.00018 30.3 12.6 101 16-129 42-147 (391)
29 3zwl_B Eukaryotic translation 89.9 4.6 0.00016 29.7 12.2 108 17-129 86-206 (369)
30 3mkq_A Coatomer beta'-subunit; 89.2 7.7 0.00026 32.6 12.5 104 16-129 66-172 (814)
31 3jro_A Fusion protein of prote 89.0 6.6 0.00023 34.0 12.3 106 17-129 67-189 (753)
32 2vdu_B TRNA (guanine-N(7)-)-me 89.0 7.3 0.00025 30.8 12.1 64 16-84 251-337 (450)
33 3i2n_A WD repeat-containing pr 88.9 5.6 0.00019 29.3 11.0 103 16-128 128-242 (357)
34 2vdu_B TRNA (guanine-N(7)-)-me 88.8 7.5 0.00026 30.7 12.2 106 16-128 113-228 (450)
35 2aq5_A Coronin-1A; WD40 repeat 88.7 6.8 0.00023 30.2 12.4 105 18-129 94-207 (402)
36 4gqb_B Methylosome protein 50; 88.3 7.6 0.00026 30.2 13.5 104 17-129 139-246 (344)
37 2hqs_A Protein TOLB; TOLB, PAL 87.9 8.9 0.0003 30.5 12.7 108 11-128 184-299 (415)
38 2pm7_B Protein transport prote 87.7 7 0.00024 29.1 13.7 111 13-129 17-132 (297)
39 1yfq_A Cell cycle arrest prote 87.0 7.4 0.00025 28.6 12.3 103 16-128 22-130 (342)
40 3fm0_A Protein CIAO1; WDR39,SG 86.5 9.1 0.00031 29.1 11.3 104 17-127 117-223 (345)
41 4g56_B MGC81050 protein; prote 86.3 7.3 0.00025 30.1 10.0 101 18-129 239-343 (357)
42 3zwl_B Eukaryotic translation 86.2 8.2 0.00028 28.3 12.2 108 16-129 229-346 (369)
43 1r5m_A SIR4-interacting protei 85.6 9.6 0.00033 28.6 12.4 102 17-129 217-319 (425)
44 3bg1_A Protein SEC13 homolog; 85.0 10 0.00035 28.5 11.2 108 16-129 24-136 (316)
45 3dwl_C Actin-related protein 2 84.8 6.5 0.00022 29.6 8.9 107 17-129 112-236 (377)
46 2ojh_A Uncharacterized protein 84.8 8.3 0.00028 27.1 11.0 108 12-127 48-158 (297)
47 4aow_A Guanine nucleotide-bind 84.6 9.8 0.00034 27.8 10.2 94 24-130 193-287 (340)
48 3u4y_A Uncharacterized protein 84.1 11 0.00036 27.8 12.0 104 16-128 94-206 (331)
49 4a11_B DNA excision repair pro 84.0 11 0.00039 28.1 13.2 100 19-129 114-218 (408)
50 2pbi_B Guanine nucleotide-bind 84.0 13 0.00043 28.6 11.7 101 19-128 211-314 (354)
51 3bws_A Protein LP49; two-domai 83.7 13 0.00044 28.5 12.3 105 16-129 313-432 (433)
52 3odt_A Protein DOA1; ubiquitin 83.7 10 0.00035 27.3 12.5 100 17-129 155-255 (313)
53 3v7d_B Cell division control p 83.6 14 0.00047 28.8 12.9 102 16-129 279-381 (464)
54 4gq1_A NUP37; propeller, trans 83.4 9.9 0.00034 29.7 9.7 99 24-129 109-218 (393)
55 3mmy_A MRNA export factor; mRN 83.1 12 0.0004 27.5 12.4 101 19-129 56-160 (368)
56 2ynn_A Coatomer subunit beta'; 83.0 12 0.00042 27.8 12.9 103 16-128 66-171 (304)
57 4e54_B DNA damage-binding prot 82.8 15 0.00053 28.8 11.8 102 18-129 178-282 (435)
58 3vl1_A 26S proteasome regulato 82.7 14 0.00047 28.1 12.2 60 17-85 151-211 (420)
59 2pm7_B Protein transport prote 82.3 13 0.00045 27.5 11.7 105 18-128 68-188 (297)
60 3s94_A LRP-6, low-density lipo 82.2 8.5 0.00029 33.3 9.5 106 17-132 317-426 (619)
61 3f3f_A Nucleoporin SEH1; struc 81.6 12 0.00042 26.8 11.4 106 17-129 124-249 (351)
62 4gqb_B Methylosome protein 50; 81.4 17 0.00057 28.2 12.9 104 17-128 93-200 (344)
63 3dwl_C Actin-related protein 2 81.3 7.7 0.00026 29.2 8.0 105 17-128 67-176 (377)
64 3ow8_A WD repeat-containing pr 81.3 16 0.00053 27.7 11.3 103 16-129 175-279 (321)
65 4a0p_A LRP6, LRP-6, low-densit 80.9 27 0.00092 30.2 12.9 108 17-133 308-424 (628)
66 1erj_A Transcriptional repress 80.8 18 0.0006 28.1 12.4 104 17-129 177-287 (393)
67 1p22_A F-BOX/WD-repeat protein 80.7 18 0.00063 28.2 13.2 102 16-129 182-285 (435)
68 3scy_A Hypothetical bacterial 80.6 16 0.00055 27.5 14.0 66 16-85 221-290 (361)
69 4ery_A WD repeat-containing pr 79.8 16 0.00054 26.8 12.1 101 17-129 119-223 (312)
70 4a11_B DNA excision repair pro 79.6 17 0.00057 27.1 12.9 103 19-129 158-276 (408)
71 3v7d_B Cell division control p 79.5 20 0.00068 27.9 13.4 106 12-129 127-236 (464)
72 4a0p_A LRP6, LRP-6, low-densit 79.4 24 0.00083 30.5 11.5 105 17-131 6-113 (628)
73 3hfq_A Uncharacterized protein 79.4 17 0.00059 27.1 10.6 106 17-128 50-170 (347)
74 2oit_A Nucleoporin 214KDA; NH2 78.8 9.3 0.00032 30.9 8.2 100 24-130 116-224 (434)
75 3p5b_L Low density lipoprotein 78.3 24 0.00084 28.2 11.1 102 19-132 85-193 (400)
76 1sq9_A Antiviral protein SKI8; 78.3 19 0.00066 27.0 12.4 96 24-129 205-322 (397)
77 4ery_A WD repeat-containing pr 78.1 18 0.00061 26.5 12.8 103 18-129 162-268 (312)
78 2aq5_A Coronin-1A; WD40 repeat 78.1 21 0.00072 27.4 13.3 108 17-129 188-299 (402)
79 4aow_A Guanine nucleotide-bind 77.7 18 0.00061 26.3 10.2 48 19-67 52-104 (340)
80 4h5i_A Guanine nucleotide-exch 77.7 13 0.00045 28.8 8.5 64 16-87 280-344 (365)
81 2hqs_A Protein TOLB; TOLB, PAL 77.7 24 0.00083 27.9 11.8 108 12-129 229-344 (415)
82 3vgz_A Uncharacterized protein 77.6 19 0.00064 26.5 13.3 103 16-128 195-302 (353)
83 2bkl_A Prolyl endopeptidase; m 76.7 34 0.0011 29.0 13.3 111 11-128 173-303 (695)
84 1sq9_A Antiviral protein SKI8; 76.6 22 0.00074 26.7 12.3 105 17-129 245-395 (397)
85 3bg1_A Protein SEC13 homolog; 76.4 18 0.00062 27.0 8.8 62 18-85 72-135 (316)
86 3azo_A Aminopeptidase; POP fam 76.3 31 0.0011 28.4 12.7 70 11-86 193-272 (662)
87 1yfq_A Cell cycle arrest prote 76.0 20 0.0007 26.1 14.3 108 15-129 158-282 (342)
88 1pgu_A Actin interacting prote 76.0 28 0.00096 27.7 13.1 105 18-129 79-192 (615)
89 1ijq_A LDL receptor, low-densi 75.2 26 0.00087 26.9 11.1 101 19-131 3-110 (316)
90 3iz6_a 40S ribosomal protein R 75.1 26 0.00089 26.9 12.6 104 20-129 173-280 (380)
91 1r5m_A SIR4-interacting protei 74.7 24 0.00082 26.3 12.0 105 16-129 56-180 (425)
92 3dm0_A Maltose-binding peripla 74.3 38 0.0013 28.4 11.7 104 17-129 442-550 (694)
93 2ynn_A Coatomer subunit beta'; 73.8 25 0.00084 26.1 10.8 103 16-129 24-128 (304)
94 3hfq_A Uncharacterized protein 73.7 25 0.00086 26.1 13.6 107 16-128 96-217 (347)
95 3k26_A Polycomb protein EED; W 73.6 24 0.00081 25.8 13.1 103 20-129 37-147 (366)
96 1l0q_A Surface layer protein; 73.2 27 0.00092 26.2 13.6 101 16-129 84-189 (391)
97 3dm0_A Maltose-binding peripla 72.4 38 0.0013 28.4 10.6 103 19-130 396-504 (694)
98 3mmy_A MRNA export factor; mRN 72.4 25 0.00087 25.6 12.2 99 17-130 98-200 (368)
99 1got_B GT-beta; complex (GTP-b 71.3 30 0.001 26.0 11.6 94 24-128 204-300 (340)
100 3dw8_B Serine/threonine-protei 70.7 33 0.0011 26.2 12.2 107 17-129 189-315 (447)
101 3sfz_A APAF-1, apoptotic pepti 69.4 48 0.0017 29.6 11.0 104 17-129 669-774 (1249)
102 3o4h_A Acylamino-acid-releasin 69.2 29 0.001 28.2 9.0 67 11-87 155-226 (582)
103 2ovr_B FBW7, F-BOX/WD repeat p 68.1 40 0.0014 26.1 12.2 107 14-130 326-443 (445)
104 1p22_A F-BOX/WD-repeat protein 67.6 41 0.0014 26.1 13.5 102 16-128 222-324 (435)
105 4gga_A P55CDC, cell division c 66.1 44 0.0015 25.9 14.2 102 17-128 116-217 (420)
106 2ecf_A Dipeptidyl peptidase IV 66.0 57 0.002 27.2 11.8 69 12-87 293-368 (741)
107 3scy_A Hypothetical bacterial 65.9 39 0.0013 25.3 13.8 114 8-129 49-186 (361)
108 4gga_A P55CDC, cell division c 65.5 45 0.0015 25.8 11.4 102 17-128 288-394 (420)
109 3iuj_A Prolyl endopeptidase; h 64.9 65 0.0022 27.4 14.3 115 10-129 179-314 (693)
110 2z3z_A Dipeptidyl aminopeptida 64.8 59 0.002 26.9 11.7 58 11-68 126-199 (706)
111 3sfz_A APAF-1, apoptotic pepti 64.5 71 0.0024 28.5 11.1 101 16-128 972-1073(1249)
112 2hes_X YDR267CP; beta-propelle 64.3 43 0.0015 25.1 12.2 105 17-128 119-229 (330)
113 2ovr_B FBW7, F-BOX/WD repeat p 63.6 50 0.0017 25.6 12.5 100 15-128 207-307 (445)
114 3iz6_a 40S ribosomal protein R 63.4 48 0.0016 25.4 12.8 101 24-130 269-376 (380)
115 2j04_B YDR362CP, TAU91; beta p 63.1 66 0.0022 26.8 11.9 99 24-128 181-295 (524)
116 1npe_A Nidogen, entactin; glyc 63.0 40 0.0014 24.4 11.6 102 18-130 2-111 (267)
117 3ow8_A WD repeat-containing pr 63.0 46 0.0016 25.0 12.0 103 16-129 133-237 (321)
118 1erj_A Transcriptional repress 63.0 50 0.0017 25.4 10.7 101 16-128 134-237 (393)
119 2ecf_A Dipeptidyl peptidase IV 62.7 66 0.0023 26.7 11.6 57 11-67 42-126 (741)
120 1pby_B Quinohemoprotein amine 61.9 42 0.0014 24.2 8.7 47 16-67 251-297 (337)
121 4ggc_A P55CDC, cell division c 61.8 41 0.0014 24.1 10.9 107 16-128 161-272 (318)
122 2xzm_R RACK1; ribosome, transl 61.4 49 0.0017 24.8 13.8 53 24-85 96-148 (343)
123 3lrv_A PRE-mRNA-splicing facto 61.3 49 0.0017 24.7 14.1 101 19-129 141-244 (343)
124 3azo_A Aminopeptidase; POP fam 61.1 40 0.0014 27.7 8.4 112 12-127 136-272 (662)
125 1ri6_A Putative isomerase YBHE 60.8 44 0.0015 24.1 14.0 65 16-85 139-208 (343)
126 3frx_A Guanine nucleotide-bind 60.5 50 0.0017 24.6 11.7 101 17-129 77-185 (319)
127 4gq1_A NUP37; propeller, trans 60.3 57 0.0019 25.2 11.7 101 20-128 159-285 (393)
128 3u4y_A Uncharacterized protein 60.2 47 0.0016 24.2 12.2 52 14-69 6-59 (331)
129 3fvz_A Peptidyl-glycine alpha- 59.6 54 0.0018 24.7 12.5 108 18-132 102-231 (329)
130 3e5z_A Putative gluconolactona 59.5 35 0.0012 24.9 7.1 49 9-62 31-81 (296)
131 3m0c_C LDL receptor, low-densi 58.4 91 0.0031 27.9 10.7 104 19-132 397-505 (791)
132 3frx_A Guanine nucleotide-bind 58.3 55 0.0019 24.4 11.4 103 19-130 31-139 (319)
133 2hes_X YDR267CP; beta-propelle 56.9 59 0.002 24.3 13.4 110 13-128 20-137 (330)
134 3gre_A Serine/threonine-protei 56.8 64 0.0022 24.7 14.1 101 17-128 182-291 (437)
135 4a5s_A Dipeptidyl peptidase 4 56.6 92 0.0032 26.5 12.8 73 11-87 265-352 (740)
136 1nr0_A Actin interacting prote 55.7 86 0.003 25.9 12.1 105 17-127 503-609 (611)
137 3vu4_A KMHSV2; beta-propeller 55.7 65 0.0022 24.5 13.9 104 17-128 207-335 (355)
138 3v64_C Agrin; beta propeller, 55.3 72 0.0024 24.8 13.1 103 17-131 44-149 (349)
139 2ojh_A Uncharacterized protein 55.2 50 0.0017 22.9 10.4 64 16-86 139-204 (297)
140 3v65_B Low-density lipoprotein 54.4 78 0.0027 25.0 10.3 102 17-130 87-191 (386)
141 1vyh_C Platelet-activating fac 53.7 76 0.0026 24.6 11.4 95 24-129 128-223 (410)
142 2ymu_A WD-40 repeat protein; u 53.0 84 0.0029 24.9 11.4 104 16-132 396-501 (577)
143 3bws_A Protein LP49; two-domai 52.7 73 0.0025 24.1 12.2 61 16-85 264-333 (433)
144 2gop_A Trilobed protease; beta 52.4 67 0.0023 23.6 11.2 61 16-87 23-93 (347)
145 3s94_A LRP-6, low-density lipo 51.8 96 0.0033 26.6 9.5 106 17-132 9-118 (619)
146 2xzh_A Clathrin heavy chain 1; 51.5 1.1E+02 0.0036 25.6 9.6 102 16-128 116-235 (365)
147 3g4e_A Regucalcin; six bladed 50.8 49 0.0017 24.5 6.7 29 9-37 16-46 (297)
148 2ymu_A WD-40 repeat protein; u 50.5 92 0.0032 24.7 11.3 103 17-132 438-542 (577)
149 1bpo_A Protein (clathrin); cla 50.4 1E+02 0.0034 26.8 9.2 105 16-128 115-234 (494)
150 3vgz_A Uncharacterized protein 49.8 72 0.0025 23.2 12.7 54 16-69 99-160 (353)
151 3sov_A LRP-6, low-density lipo 49.5 88 0.003 24.1 10.7 100 19-131 6-112 (318)
152 2z3z_A Dipeptidyl aminopeptida 49.2 1.1E+02 0.0038 25.2 9.9 53 11-67 31-98 (706)
153 4gq2_M Nucleoporin NUP120; bet 48.2 66 0.0022 29.3 8.2 65 19-86 249-317 (950)
154 3gre_A Serine/threonine-protei 48.1 89 0.0031 23.8 12.1 105 17-129 226-359 (437)
155 2j04_A TAU60, YPL007P, hypothe 46.5 1.5E+02 0.0052 26.0 13.6 109 12-130 136-255 (588)
156 1nir_A Nitrite reductase; hemo 45.8 1.3E+02 0.0044 25.0 13.3 101 18-128 190-310 (543)
157 1xfd_A DIP, dipeptidyl aminope 45.8 66 0.0023 26.6 7.3 59 11-69 119-192 (723)
158 3lrv_A PRE-mRNA-splicing facto 45.8 90 0.0031 23.2 12.2 103 19-129 183-292 (343)
159 1nir_A Nitrite reductase; hemo 44.5 1.3E+02 0.0046 24.8 13.4 106 10-128 140-256 (543)
160 1pby_B Quinohemoprotein amine 43.5 53 0.0018 23.6 5.7 48 16-67 92-152 (337)
161 3hrp_A Uncharacterized protein 42.3 1.3E+02 0.0044 23.9 8.6 66 12-81 225-294 (409)
162 2pbi_B Guanine nucleotide-bind 41.7 1.1E+02 0.0038 23.1 12.9 101 19-128 78-184 (354)
163 1jmx_B Amine dehydrogenase; ox 41.4 98 0.0033 22.3 9.2 47 16-67 266-312 (349)
164 2oaj_A Protein SNI1; WD40 repe 39.2 2.1E+02 0.007 25.4 11.8 112 12-129 105-242 (902)
165 3ovu_B Iron-regulated surface 37.9 1.2E+02 0.0041 22.3 7.5 69 12-85 64-135 (164)
166 1jof_A Carboxy-CIS,CIS-muconat 37.6 1.3E+02 0.0045 22.7 11.3 46 17-64 51-97 (365)
167 1nr0_A Actin interacting prote 37.3 1.7E+02 0.0059 24.0 13.1 105 17-128 202-312 (611)
168 3dw8_B Serine/threonine-protei 36.6 1.4E+02 0.0046 22.6 12.1 105 18-129 240-373 (447)
169 2gop_A Trilobed protease; beta 36.1 73 0.0025 23.4 5.6 54 11-69 64-123 (347)
170 3m0c_C LDL receptor, low-densi 35.9 2.4E+02 0.0081 25.2 14.6 105 16-130 481-590 (791)
171 2xdw_A Prolyl endopeptidase; a 35.5 2E+02 0.0068 24.2 13.6 59 11-69 176-252 (710)
172 1npe_A Nidogen, entactin; glyc 35.1 1.2E+02 0.0042 21.7 12.0 51 16-69 46-98 (267)
173 1jof_A Carboxy-CIS,CIS-muconat 35.0 1.4E+02 0.0049 22.4 9.1 63 17-84 156-222 (365)
174 1jmx_B Amine dehydrogenase; ox 35.0 1.3E+02 0.0043 21.7 11.8 51 17-69 10-62 (349)
175 2oit_A Nucleoporin 214KDA; NH2 34.2 1.8E+02 0.006 23.2 11.7 97 24-129 170-278 (434)
176 3o4h_A Acylamino-acid-releasin 34.0 1.8E+02 0.0063 23.4 11.7 107 12-129 116-227 (582)
177 4ggc_A P55CDC, cell division c 33.0 1.3E+02 0.0044 21.3 13.9 62 17-85 36-97 (318)
178 3dr2_A Exported gluconolactona 31.8 1.5E+02 0.0052 21.7 7.2 52 9-67 48-102 (305)
179 3pbp_A Nucleoporin NUP82; beta 31.1 1.6E+02 0.0056 25.1 7.5 72 12-87 134-215 (452)
180 3pbp_A Nucleoporin NUP82; beta 29.6 2.6E+02 0.009 23.8 14.0 105 16-129 31-158 (452)
181 1n7d_A LDL receptor, low-densi 28.7 39 0.0013 29.5 3.3 45 19-67 379-423 (699)
182 3kvp_A Uncharacterized protein 28.3 30 0.001 22.5 1.9 22 106-128 25-46 (72)
183 4a5s_A Dipeptidyl peptidase 4 28.2 2.7E+02 0.0093 23.5 11.0 53 17-69 27-81 (740)
184 3ei3_A DNA damage-binding prot 28.1 3.7E+02 0.013 25.1 14.6 109 3-129 879-999 (1158)
185 3v64_C Agrin; beta propeller, 27.7 2.1E+02 0.0072 22.0 13.2 105 16-130 126-235 (349)
186 3pe7_A Oligogalacturonate lyas 27.7 66 0.0023 24.0 4.1 33 11-43 86-119 (388)
187 1k32_A Tricorn protease; prote 26.6 3.4E+02 0.012 24.1 10.3 97 11-116 384-488 (1045)
188 1yiq_A Quinohemoprotein alcoho 25.4 3E+02 0.01 23.6 8.4 47 12-60 481-528 (689)
189 3v65_B Low-density lipoprotein 24.4 2.5E+02 0.0087 21.9 12.0 105 16-130 169-278 (386)
190 3kya_A Putative phosphatase; s 24.4 3.2E+02 0.011 23.1 11.1 109 17-134 258-415 (496)
191 3amr_A 3-phytase; beta-propell 21.4 1E+02 0.0035 25.3 4.3 28 105-132 30-62 (355)
192 1z68_A Fibroblast activation p 21.1 3.5E+02 0.012 22.3 9.0 113 11-125 115-281 (719)
193 1n7d_A LDL receptor, low-densi 20.9 3.1E+02 0.011 23.7 7.6 49 16-67 463-513 (699)
194 1yr2_A Prolyl oligopeptidase; 20.7 3.8E+02 0.013 22.6 13.2 115 10-129 213-350 (741)
195 3vu4_A KMHSV2; beta-propeller 20.1 2.8E+02 0.0096 20.8 13.1 103 18-129 148-271 (355)
No 1
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=94.92 E-value=0.66 Score=34.06 Aligned_cols=108 Identities=14% Similarity=0.084 Sum_probs=64.0
Q ss_pred eCCEEEEEeCCeEEEEECCCC-CceeeEEee-cCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCccccc
Q psy74 16 HNNVMYYVKERFLHRLDLTNS-KDSVVMQLR-GGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKE 93 (134)
Q Consensus 16 ~~n~L~Yvkek~l~~~D~~t~-~~~~~~slr-g~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~ 93 (134)
.+..|+...+..|+.||+.+. ...++..+. ...-.+...+.++|....+++.+ .+|...++.+.........
T Consensus 62 ~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------~d~~i~~~d~~~~~~~~~~ 135 (337)
T 1gxr_A 62 PTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGG------EASTLSIWDLAAPTPRIKA 135 (337)
T ss_dssp SSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEE------SSSEEEEEECCCC--EEEE
T ss_pred CCcEEEEcCCCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEc------CCCcEEEEECCCCCcceee
Confidence 345566668999999999984 444555555 23445788999999877666653 3456666655433210000
Q ss_pred ccCCccccceeEEEEeCC-eEEEEecCCEEEEEeCCC
Q psy74 94 VADGKRSTGISAVWVARN-RFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 94 ~~~~~~g~g~~AvFVaRN-RfAvldk~~~i~Iknl~n 129 (134)
......+...+..|-..+ .+++-..+++|.|-|++.
T Consensus 136 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~ 172 (337)
T 1gxr_A 136 ELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN 172 (337)
T ss_dssp EEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred ecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC
Confidence 111223334445555443 456666688899999864
No 2
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=94.54 E-value=1 Score=33.61 Aligned_cols=105 Identities=10% Similarity=0.114 Sum_probs=64.1
Q ss_pred CCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccC--CCeEEEEeccCCCCCCceEEEEEccCCCccccc
Q psy74 17 NNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNAT--EHSILVTTRNANNFENSTYDLYMIPKEESERKE 93 (134)
Q Consensus 17 ~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpa--e~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~ 93 (134)
++.|+-. .|..|+.||+.+..-..+..+.+ .-.+...+.++|. ...+++.+ .+|...++.+.........
T Consensus 69 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~~------~d~~i~v~d~~~~~~~~~~ 141 (379)
T 3jrp_A 69 GTILASCSYDGKVLIWKEENGRWSQIAVHAV-HSASVNSVQWAPHEYGPLLLVAS------SDGKVSVVEFKENGTTSPI 141 (379)
T ss_dssp CSEEEEEETTSCEEEEEEETTEEEEEEEECC-CSSCEEEEEECCGGGCSEEEEEE------TTSEEEEEECCTTSCCCEE
T ss_pred CCEEEEeccCCEEEEEEcCCCceeEeeeecC-CCcceEEEEeCCCCCCCEEEEec------CCCcEEEEecCCCCceeeE
Confidence 4445555 88999999999866555555553 2336889999998 45444442 3456666665543221111
Q ss_pred ccCCccccceeEEEEe--------------CCeEEEEecCCEEEEEeCC
Q psy74 94 VADGKRSTGISAVWVA--------------RNRFAVLDRNHTILIKNLK 128 (134)
Q Consensus 94 ~~~~~~g~g~~AvFVa--------------RNRfAvldk~~~i~Iknl~ 128 (134)
......+...+..|-. .+.+|+-..+++|.|.++.
T Consensus 142 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 190 (379)
T 3jrp_A 142 IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN 190 (379)
T ss_dssp EEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEE
T ss_pred EecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEec
Confidence 1123333445566655 4667777778899998885
No 3
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=94.33 E-value=1.3 Score=33.82 Aligned_cols=108 Identities=11% Similarity=-0.024 Sum_probs=63.4
Q ss_pred CEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCcccccccC
Q psy74 18 NVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVAD 96 (134)
Q Consensus 18 n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~~~ 96 (134)
+.|+-. .+..|+.||+.+......+.+.| .-.+...+.++|.+...|++.. ..|...++.+............
T Consensus 87 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~-----~d~~i~iwd~~~~~~~~~~~~~ 160 (383)
T 3ei3_B 87 TTVAVGSKGGDIILWDYDVQNKTSFIQGMG-PGDAITGMKFNQFNTNQLFVSS-----IRGATTLRDFSGSVIQVFAKTD 160 (383)
T ss_dssp TEEEEEEBTSCEEEEETTSTTCEEEECCCS-TTCBEEEEEEETTEEEEEEEEE-----TTTEEEEEETTSCEEEEEECCC
T ss_pred CEEEEEcCCCeEEEEeCCCcccceeeecCC-cCCceeEEEeCCCCCCEEEEEe-----CCCEEEEEECCCCceEEEeccC
Confidence 344444 88999999999876655555432 3336789999996666666544 3356666665532111111111
Q ss_pred CccccceeEEEEeCC-eEEEEecCCEEEEEeCCCce
Q psy74 97 GKRSTGISAVWVARN-RFAVLDRNHTILIKNLKNEF 131 (134)
Q Consensus 97 ~~~g~g~~AvFVaRN-RfAvldk~~~i~Iknl~n~~ 131 (134)
...+...+..|-... .+|+-..+++|.|-|++++.
T Consensus 161 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 196 (383)
T 3ei3_B 161 SWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHE 196 (383)
T ss_dssp CSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCE
T ss_pred CCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCE
Confidence 222334445555443 45555558899999986543
No 4
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=93.96 E-value=1.1 Score=34.86 Aligned_cols=105 Identities=7% Similarity=0.140 Sum_probs=66.6
Q ss_pred CCEEEEE----eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCcccc
Q psy74 17 NNVMYYV----KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERK 92 (134)
Q Consensus 17 ~n~L~Yv----kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~ 92 (134)
+..|+.. .++.|+.||+.+.+- +..+.. -.+...+.++|....++++.+ .+.|...++.++.......
T Consensus 271 ~~~ll~~~~gs~d~~i~i~d~~~~~~--~~~~~~--~~~v~~~~~s~~~~~l~~~~g----~~dg~i~v~~~~~~~~~~~ 342 (401)
T 4aez_A 271 QSNLLATGGGTMDKQIHFWNAATGAR--VNTVDA--GSQVTSLIWSPHSKEIMSTHG----FPDNNLSIWSYSSSGLTKQ 342 (401)
T ss_dssp STTEEEEECCTTTCEEEEEETTTCCE--EEEEEC--SSCEEEEEECSSSSEEEEEEC----TTTCEEEEEEEETTEEEEE
T ss_pred CCCEEEEecCCCCCEEEEEECCCCCE--EEEEeC--CCcEEEEEECCCCCeEEEEee----cCCCcEEEEecCCccceeE
Confidence 4456665 489999999987543 334441 125789999999988888755 4566788887765321110
Q ss_pred cccCCccccceeEEEEeCCeE-EEEecCCEEEEEeCCC
Q psy74 93 EVADGKRSTGISAVWVARNRF-AVLDRNHTILIKNLKN 129 (134)
Q Consensus 93 ~~~~~~~g~g~~AvFVaRNRf-Avldk~~~i~Iknl~n 129 (134)
-.-....+...+..|-...++ |+-..+++|.|-++.+
T Consensus 343 ~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~ 380 (401)
T 4aez_A 343 VDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYD 380 (401)
T ss_dssp EEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC
T ss_pred EEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 011233444555667655554 4444589999999963
No 5
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=93.85 E-value=1.3 Score=32.10 Aligned_cols=108 Identities=8% Similarity=0.108 Sum_probs=64.9
Q ss_pred eCCEEEEE-eCCeEEEEECCCCCc--eeeEEeecCCCCCceEEEeccC-CCeEEEEeccCCCCCCceEEEEEccCCCc-c
Q psy74 16 HNNVMYYV-KERFLHRLDLTNSKD--SVVMQLRGGGRIPAHSISYNAT-EHSILVTTRNANNFENSTYDLYMIPKEES-E 90 (134)
Q Consensus 16 ~~n~L~Yv-kek~l~~~D~~t~~~--~~~~slrg~~~~~~~slsyNpa-e~~vLv~~~~~~~~d~g~yeL~~lpk~~~-~ 90 (134)
.++.|.-. .+..|+.||+.+... ..+..+++ .-.+...|.++|. +...|++.. ..|...++.+..... .
T Consensus 22 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~d~~~l~s~~-----~dg~v~vwd~~~~~~~~ 95 (351)
T 3f3f_A 22 YGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRA-HDSSIVAIDWASPEYGRIIASAS-----YDKTVKLWEEDPDQEEC 95 (351)
T ss_dssp SSSEEEEEETTSEEEEEEECSSSCCEEEEEEEEC-CSSCEEEEEECCGGGCSEEEEEE-----TTSCEEEEEECTTSCTT
T ss_pred CCCEEEEeeCCCeEEEEECCCCCCcceecceecc-CCCcEEEEEEcCCCCCCEEEEEc-----CCCeEEEEecCCCcccc
Confidence 45556665 789999999997433 34444443 3346899999997 344555433 335666666544321 0
Q ss_pred -----c-ccccCCccccceeEEEEe---CCeEEEEecCCEEEEEeCCC
Q psy74 91 -----R-KEVADGKRSTGISAVWVA---RNRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 91 -----~-~~~~~~~~g~g~~AvFVa---RNRfAvldk~~~i~Iknl~n 129 (134)
. ...-....+...+..|-. .+.+|+-..+++|.|-|+..
T Consensus 96 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~ 143 (351)
T 3f3f_A 96 SGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALE 143 (351)
T ss_dssp SSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSS
T ss_pred cccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCC
Confidence 0 111123344455566665 34577777799999999853
No 6
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=93.75 E-value=1.6 Score=32.68 Aligned_cols=119 Identities=13% Similarity=0.144 Sum_probs=68.0
Q ss_pred EEEecCCCCccee----eCCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCc
Q psy74 3 VFKFERERPAYTV----HNNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENS 77 (134)
Q Consensus 3 VFKLeRERPa~~~----~~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g 77 (134)
+|++..+ |-.++ .++.|+.. .++.|+.||+.+..-..+..+.+ .-.+...|.++|....++..+ ..|
T Consensus 3 ~~~~~~~-~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~~~~------~dg 74 (372)
T 1k8k_C 3 YHSFLVE-PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKE-HNGQVTGVDWAPDSNRIVTCG------TDR 74 (372)
T ss_dssp EEESCSS-CCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEEC-CSSCEEEEEEETTTTEEEEEE------TTS
T ss_pred eecccCC-CeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecC-CCCcccEEEEeCCCCEEEEEc------CCC
Confidence 5676544 33332 45667777 89999999998765335555553 233688999999766655543 334
Q ss_pred eEEEEEccCCCcccccccCCccccceeEEEEe-CCeEEEEecCCEEEEEeCCC
Q psy74 78 TYDLYMIPKEESERKEVADGKRSTGISAVWVA-RNRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 78 ~yeL~~lpk~~~~~~~~~~~~~g~g~~AvFVa-RNRfAvldk~~~i~Iknl~n 129 (134)
...++.+........-......+...+..|-. .+.+|+-..+++|.|.+++.
T Consensus 75 ~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~ 127 (372)
T 1k8k_C 75 NAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQ 127 (372)
T ss_dssp CEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEET
T ss_pred eEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecC
Confidence 56666553321000000112233344444543 34566666688888887753
No 7
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=93.37 E-value=1.8 Score=32.20 Aligned_cols=109 Identities=9% Similarity=0.166 Sum_probs=64.4
Q ss_pred eCCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCC-CeEEEEeccCCCCCCceEEEEEccCCCccccc
Q psy74 16 HNNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATE-HSILVTTRNANNFENSTYDLYMIPKEESERKE 93 (134)
Q Consensus 16 ~~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae-~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~ 93 (134)
.++.|.-. .+..|+.||+.......+..+++ ...+...|.++|.. ...|++.. .+|...++.+.........
T Consensus 22 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~l~s~~-----~dg~v~iwd~~~~~~~~~~ 95 (379)
T 3jrp_A 22 YGKRLATCSSDKTIKIFEVEGETHKLIDTLTG-HEGPVWRVDWAHPKFGTILASCS-----YDGKVLIWKEENGRWSQIA 95 (379)
T ss_dssp SSSEEEEEETTSCEEEEEEETTEEEEEEEECC-CSSCEEEEEECCGGGCSEEEEEE-----TTSCEEEEEEETTEEEEEE
T ss_pred CCCEEEEEECCCcEEEEecCCCcceeeeEecC-CCCcEEEEEeCCCCCCCEEEEec-----cCCEEEEEEcCCCceeEee
Confidence 45666666 79999999998655556666664 23467899998662 34444433 3345666655433100111
Q ss_pred ccCCccccceeEEEEe---CCeEEEEecCCEEEEEeCCCc
Q psy74 94 VADGKRSTGISAVWVA---RNRFAVLDRNHTILIKNLKNE 130 (134)
Q Consensus 94 ~~~~~~g~g~~AvFVa---RNRfAvldk~~~i~Iknl~n~ 130 (134)
......+...+..|-. .+.+++-..+++|.|.++...
T Consensus 96 ~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 135 (379)
T 3jrp_A 96 VHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 135 (379)
T ss_dssp EECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTT
T ss_pred eecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCC
Confidence 1122333344445543 346777777899999998643
No 8
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=93.36 E-value=1.7 Score=32.12 Aligned_cols=104 Identities=11% Similarity=0.121 Sum_probs=59.0
Q ss_pred eCCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEecc---CCCeEEEEeccCCCCCCceEEEEEccCCCc-c
Q psy74 16 HNNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNA---TEHSILVTTRNANNFENSTYDLYMIPKEES-E 90 (134)
Q Consensus 16 ~~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNp---ae~~vLv~~~~~~~~d~g~yeL~~lpk~~~-~ 90 (134)
.++.|+.. .++.|+.||+.+........ .-.+..++.++| ....+++. . .+|...++.+..... .
T Consensus 179 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~l~~~-~-----~dg~i~i~d~~~~~~~~ 248 (357)
T 3i2n_A 179 EERVVCAGYDNGDIKLFDLRNMALRWETN----IKNGVCSLEFDRKDISMNKLVAT-S-----LEGKFHVFDMRTQHPTK 248 (357)
T ss_dssp CCCEEEEEETTSEEEEEETTTTEEEEEEE----CSSCEEEEEESCSSSSCCEEEEE-E-----STTEEEEEEEEEEETTT
T ss_pred CCCEEEEEccCCeEEEEECccCceeeecC----CCCceEEEEcCCCCCCCCEEEEE-C-----CCCeEEEEeCcCCCccc
Confidence 44555555 77999999999855322211 122678999999 45555544 3 334666665443211 1
Q ss_pred ccc--ccCCccccceeEEEEeCCe--EEEEecCCEEEEEeCCC
Q psy74 91 RKE--VADGKRSTGISAVWVARNR--FAVLDRNHTILIKNLKN 129 (134)
Q Consensus 91 ~~~--~~~~~~g~g~~AvFVaRNR--fAvldk~~~i~Iknl~n 129 (134)
... ......+...+..|-...+ +|.-..+++|.|-+++.
T Consensus 249 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 291 (357)
T 3i2n_A 249 GFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEY 291 (357)
T ss_dssp EEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEEC
T ss_pred ceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCC
Confidence 000 0013344445556665454 66666688999999853
No 9
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=93.22 E-value=1.4 Score=34.87 Aligned_cols=107 Identities=10% Similarity=0.002 Sum_probs=62.7
Q ss_pred CEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCcccccccC
Q psy74 18 NVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVAD 96 (134)
Q Consensus 18 n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~~~ 96 (134)
+.|.-- .|..|+.||+.+.....++.+.| .-.+...|.|+|.+...|++.. .| |+.-+..+...........+
T Consensus 133 ~~lasGs~dg~i~lWd~~~~~~~~~~~~~g-H~~~V~~l~f~p~~~~~l~s~s----~D-~~v~iwd~~~~~~~~~~~~~ 206 (435)
T 4e54_B 133 STVAVGSKGGDIMLWNFGIKDKPTFIKGIG-AGGSITGLKFNPLNTNQFYASS----ME-GTTRLQDFKGNILRVFASSD 206 (435)
T ss_dssp TCEEEEETTSCEEEECSSCCSCCEEECCCS-SSCCCCEEEECSSCTTEEEEEC----SS-SCEEEEETTSCEEEEEECCS
T ss_pred CEEEEEeCCCEEEEEECCCCCceeEEEccC-CCCCEEEEEEeCCCCCEEEEEe----CC-CEEEEeeccCCceeEEeccC
Confidence 334433 89999999999876666666654 2336789999998877777644 34 46666554322110000111
Q ss_pred CccccceeEEEEeCC-eEEEEecCCEEEEEeCCCc
Q psy74 97 GKRSTGISAVWVARN-RFAVLDRNHTILIKNLKNE 130 (134)
Q Consensus 97 ~~~g~g~~AvFVaRN-RfAvldk~~~i~Iknl~n~ 130 (134)
.......+..|-.-. .+|+-+.+++|.|-|++++
T Consensus 207 ~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~ 241 (435)
T 4e54_B 207 TINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK 241 (435)
T ss_dssp SCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC
T ss_pred CCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc
Confidence 122223334444333 4555556888999998654
No 10
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=93.21 E-value=1 Score=35.69 Aligned_cols=106 Identities=13% Similarity=0.211 Sum_probs=66.8
Q ss_pred CCEEEEE--eCCeEEEEECCCC-CceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCccccc
Q psy74 17 NNVMYYV--KERFLHRLDLTNS-KDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKE 93 (134)
Q Consensus 17 ~n~L~Yv--kek~l~~~D~~t~-~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~ 93 (134)
++.++.+ .+..|+.||+.+. ...++..+++ .-.+++.|+++|....+|++.. ..|...++.+..... ...
T Consensus 243 ~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~-~~~~v~~i~~~p~~~~~l~tg~-----~dg~v~vwd~~~~~~-~~~ 315 (430)
T 2xyi_A 243 HESLFGSVADDQKLMIWDTRNNNTSKPSHTVDA-HTAEVNCLSFNPYSEFILATGS-----ADKTVALWDLRNLKL-KLH 315 (430)
T ss_dssp CTTEEEEEETTSEEEEEETTCSCSSSCSEEEEC-CSSCEEEEEECSSCTTEEEEEE-----TTSEEEEEETTCTTS-CSE
T ss_pred CCCEEEEEeCCCeEEEEECCCCCCCcceeEeec-CCCCeEEEEeCCCCCCEEEEEe-----CCCeEEEEeCCCCCC-CeE
Confidence 4446655 7999999999984 3456666662 2236899999998876666544 456777877654221 011
Q ss_pred ccCCccccceeEEEEeCCe--EEEEecCCEEEEEeCCC
Q psy74 94 VADGKRSTGISAVWVARNR--FAVLDRNHTILIKNLKN 129 (134)
Q Consensus 94 ~~~~~~g~g~~AvFVaRNR--fAvldk~~~i~Iknl~n 129 (134)
.-....+...+..|-..++ +|.-..+++|.|-++..
T Consensus 316 ~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 316 SFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp EEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred EeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 1123344455566655443 56665688899998864
No 11
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=93.14 E-value=2.4 Score=32.96 Aligned_cols=102 Identities=15% Similarity=0.159 Sum_probs=66.5
Q ss_pred eCCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCcccccc
Q psy74 16 HNNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEV 94 (134)
Q Consensus 16 ~~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~ 94 (134)
.++.++-+ .++.|+.||+.+..-...+... .-.+...+.++|....+++.+ .+|...++.+..... ...
T Consensus 102 s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~--~~~~v~~v~~s~~~~~l~~~~------~dg~i~iwd~~~~~~--~~~ 171 (401)
T 4aez_A 102 SNLNVVAVALERNVYVWNADSGSVSALAETD--ESTYVASVKWSHDGSFLSVGL------GNGLVDIYDVESQTK--LRT 171 (401)
T ss_dssp CTTSEEEEEETTEEEEEETTTCCEEEEEECC--TTCCEEEEEECTTSSEEEEEE------TTSCEEEEETTTCCE--EEE
T ss_pred cCCCEEEEECCCeEEEeeCCCCcEeEeeecC--CCCCEEEEEECCCCCEEEEEC------CCCeEEEEECcCCeE--EEE
Confidence 44555555 9999999999986654444432 333688999999776655543 345677776543321 111
Q ss_pred cCCccccceeEEEEeCCeEEEEecCCEEEEEeCC
Q psy74 95 ADGKRSTGISAVWVARNRFAVLDRNHTILIKNLK 128 (134)
Q Consensus 95 ~~~~~g~g~~AvFVaRNRfAvldk~~~i~Iknl~ 128 (134)
-....+...+..| ..+.+++-..+++|.|.++.
T Consensus 172 ~~~~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~ 204 (401)
T 4aez_A 172 MAGHQARVGCLSW-NRHVLSSGSRSGAIHHHDVR 204 (401)
T ss_dssp ECCCSSCEEEEEE-ETTEEEEEETTSEEEEEETT
T ss_pred ecCCCCceEEEEE-CCCEEEEEcCCCCEEEEecc
Confidence 1233444445555 78888888889999999996
No 12
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=93.08 E-value=1.8 Score=31.35 Aligned_cols=101 Identities=10% Similarity=0.051 Sum_probs=62.3
Q ss_pred eCCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCccccc-
Q psy74 16 HNNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKE- 93 (134)
Q Consensus 16 ~~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~- 93 (134)
.++.|+-. .+..|+.||+.+......+.. ...+...+.++|....++..+ .+|...++.+.....+...
T Consensus 28 ~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~------~dg~i~~~~~~~~~~~~~~~ 98 (313)
T 3odt_A 28 DDSKVASVSRDGTVRLWSKDDQWLGTVVYT---GQGFLNSVCYDSEKELLLFGG------KDTMINGVPLFATSGEDPLY 98 (313)
T ss_dssp ETTEEEEEETTSEEEEEEESSSEEEEEEEE---CSSCEEEEEEETTTTEEEEEE------TTSCEEEEETTCCTTSCC-C
T ss_pred CCCEEEEEEcCCcEEEEECCCCEEEEEeec---CCccEEEEEECCCCCEEEEec------CCCeEEEEEeeecCCCCccc
Confidence 45555555 889999999976443322222 233678999999877666653 3356666665544322211
Q ss_pred ccCCccccceeEEEEeCCeEEEEecCCEEEEEe
Q psy74 94 VADGKRSTGISAVWVARNRFAVLDRNHTILIKN 126 (134)
Q Consensus 94 ~~~~~~g~g~~AvFVaRNRfAvldk~~~i~Ikn 126 (134)
.-....+...+..| ..+.+++-..+++|.|-|
T Consensus 99 ~~~~~~~~i~~~~~-~~~~l~~~~~d~~i~~~d 130 (313)
T 3odt_A 99 TLIGHQGNVCSLSF-QDGVVISGSWDKTAKVWK 130 (313)
T ss_dssp EECCCSSCEEEEEE-ETTEEEEEETTSEEEEEE
T ss_pred chhhcccCEEEEEe-cCCEEEEEeCCCCEEEEc
Confidence 12234444445555 788888888888998887
No 13
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=92.71 E-value=0.61 Score=39.43 Aligned_cols=64 Identities=16% Similarity=0.205 Sum_probs=41.7
Q ss_pred CCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCcccccccCCccccceeEEEE-eCCeEEEEecCCEEEEE
Q psy74 48 GRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVADGKRSTGISAVWV-ARNRFAVLDRNHTILIK 125 (134)
Q Consensus 48 ~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~~~~~~g~g~~AvFV-aRNRfAvldk~~~i~Ik 125 (134)
....++.++++|....+++.+ +|.+.++.++... ....|.+.+.+|- ..+++|+.+.+++|.|.
T Consensus 355 ~~~~~~~~~~spdg~~la~~~-------~~~~~i~~~~~~~-------~~~~~~i~~~~~spdg~~la~~~~~g~v~l~ 419 (814)
T 3mkq_A 355 VDVFPQSLAHSPNGRFVTVVG-------DGEYVIYTALAWR-------NKAFGKCQDFVWGPDSNSYALIDETGQIKYY 419 (814)
T ss_dssp CSSCCSEEEECTTSSEEEEEE-------TTEEEEEETTTTE-------EEEEEECSEEEECTTSSCEEEECTTCCEEEE
T ss_pred CccCCceeEECCCCCEEEEec-------CCEEEEEECcccc-------ccCCCceEEEEEeCCCCeEEEEeCCCcEEEE
Confidence 344678999999888777763 3578888765331 1223455566666 46677777776666664
No 14
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=92.63 E-value=2 Score=33.37 Aligned_cols=105 Identities=16% Similarity=0.192 Sum_probs=61.5
Q ss_pred eCCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCc-cccc
Q psy74 16 HNNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEES-ERKE 93 (134)
Q Consensus 16 ~~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~-~~~~ 93 (134)
.++.|.-. .++.|+.||+.+.+ .+..+++ ...+.+.+.++|....++++.. .+|...+..+-.... ...
T Consensus 150 dg~~l~sgs~dg~v~iwd~~~~~--~~~~~~~-h~~~v~~v~~s~~~~~~~~s~~-----~dg~v~~wd~~~~~~~~~~- 220 (357)
T 4g56_B 150 DGTQAVSGGKDFSVKVWDLSQKA--VLKSYNA-HSSEVNCVAACPGKDTIFLSCG-----EDGRILLWDTRKPKPATRI- 220 (357)
T ss_dssp SSSEEEEEETTSCEEEEETTTTE--EEEEECC-CSSCEEEEEECTTCSSCEEEEE-----TTSCEEECCTTSSSCBCBC-
T ss_pred CCCEEEEEeCCCeEEEEECCCCc--EEEEEcC-CCCCEEEEEEccCCCceeeeec-----cCCceEEEECCCCceeeee-
Confidence 34555555 89999999998754 3444453 2236789999998876666644 334566654332211 111
Q ss_pred ccCCccccceeEEEEe--CCeEEEEecCCEEEEEeCCC
Q psy74 94 VADGKRSTGISAVWVA--RNRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 94 ~~~~~~g~g~~AvFVa--RNRfAvldk~~~i~Iknl~n 129 (134)
......+...+..|-- .+.||+=..+++|.|-|+.+
T Consensus 221 ~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~ 258 (357)
T 4g56_B 221 DFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKN 258 (357)
T ss_dssp CCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSC
T ss_pred eeccccccccchhhhhcccceEEEeecccceeEEECCC
Confidence 0112223344555542 34566666788899999854
No 15
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=92.35 E-value=2.5 Score=31.07 Aligned_cols=63 Identities=8% Similarity=0.058 Sum_probs=41.9
Q ss_pred eCCEEEEEeC--CeEEEEECC--CCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEcc
Q psy74 16 HNNVMYYVKE--RFLHRLDLT--NSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIP 85 (134)
Q Consensus 16 ~~n~L~Yvke--k~l~~~D~~--t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lp 85 (134)
.++.||..-. ..|+.||+. +..-..+..+.... .+..+.++|....++++.. ++|...++.+.
T Consensus 48 dg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~-----~~~~i~~~d~~ 114 (343)
T 1ri6_A 48 DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG--SLTHISTDHQGQFVFVGSY-----NAGNVSVTRLE 114 (343)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS--CCSEEEECTTSSEEEEEET-----TTTEEEEEEEE
T ss_pred CCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC--CCcEEEEcCCCCEEEEEec-----CCCeEEEEECC
Confidence 4566777743 899999998 44444455555222 6789999999887777644 44556666553
No 16
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=92.32 E-value=2.4 Score=30.93 Aligned_cols=101 Identities=12% Similarity=0.115 Sum_probs=61.5
Q ss_pred eCCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCcccccc
Q psy74 16 HNNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEV 94 (134)
Q Consensus 16 ~~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~ 94 (134)
.++.|+-. .+..|+.||+.+.+........+ ++..+.++|....+++.+ ++|...++.+...... .
T Consensus 194 ~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~----~v~~~~~s~~~~~l~~~~------~~~~i~~~~~~~~~~~---~ 260 (337)
T 1gxr_A 194 DGTKLWTGGLDNTVRSWDLREGRQLQQHDFTS----QIFSLGYCPTGEWLAVGM------ESSNVEVLHVNKPDKY---Q 260 (337)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEECSS----CEEEEEECTTSSEEEEEE------TTSCEEEEETTSSCEE---E
T ss_pred CCCEEEEEecCCcEEEEECCCCceEeeecCCC----ceEEEEECCCCCEEEEEc------CCCcEEEEECCCCCeE---E
Confidence 34455555 78999999998765433332212 578899999988777763 3346666665543211 1
Q ss_pred cCCccccceeEEEEeC-CeEEEEecCCEEEEEeCCC
Q psy74 95 ADGKRSTGISAVWVAR-NRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 95 ~~~~~g~g~~AvFVaR-NRfAvldk~~~i~Iknl~n 129 (134)
.....+...+..|-.. +.+|+-..+++|.|-+++.
T Consensus 261 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~ 296 (337)
T 1gxr_A 261 LHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPY 296 (337)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EcCCccceeEEEECCCCCEEEEecCCCcEEEEECCC
Confidence 1233333445555543 3466666688999999864
No 17
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=91.80 E-value=3.4 Score=32.70 Aligned_cols=106 Identities=18% Similarity=0.290 Sum_probs=68.2
Q ss_pred CEEEEE--eCCeEEEEECCCC--------CceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCC
Q psy74 18 NVMYYV--KERFLHRLDLTNS--------KDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKE 87 (134)
Q Consensus 18 n~L~Yv--kek~l~~~D~~t~--------~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~ 87 (134)
..++++ .+..|+.||+.+. .-.++..+++. -.++..|+++|.....|++.. ..|...++.+...
T Consensus 141 ~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~l~~~~~~~~~l~s~~-----~dg~i~vwd~~~~ 214 (430)
T 2xyi_A 141 ACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGH-QKEGYGLSWNPNLNGYLLSAS-----DDHTICLWDINAT 214 (430)
T ss_dssp EEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECC-SSCCCCEEECTTSTTEEEEEC-----TTSCEEEEETTSC
T ss_pred CcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCC-CCCeEEEEeCCCCCCeEEEEe-----CCCeEEEEeCCCC
Confidence 346665 6788999999862 23456666632 226789999999885666544 4567777776653
Q ss_pred Ccc-c----ccccCCccccceeEEEE--eCCeEEEEecCCEEEEEeCCC
Q psy74 88 ESE-R----KEVADGKRSTGISAVWV--ARNRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 88 ~~~-~----~~~~~~~~g~g~~AvFV--aRNRfAvldk~~~i~Iknl~n 129 (134)
... . ...-....+...+..|- ..+.||+-..+++|.|.|+..
T Consensus 215 ~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~ 263 (430)
T 2xyi_A 215 PKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRN 263 (430)
T ss_dssp CBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred CCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCC
Confidence 221 0 11112344445566676 367788877789999999964
No 18
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=91.70 E-value=3.4 Score=31.37 Aligned_cols=104 Identities=13% Similarity=0.247 Sum_probs=63.2
Q ss_pred EEEEE--eCCeEEEEECCCCCceeeEEeecCC-----CCCceEEEeccCCCeEEEEeccCCCCCC--ceEEEEEccCCCc
Q psy74 19 VMYYV--KERFLHRLDLTNSKDSVVMQLRGGG-----RIPAHSISYNATEHSILVTTRNANNFEN--STYDLYMIPKEES 89 (134)
Q Consensus 19 ~L~Yv--kek~l~~~D~~t~~~~~~~slrg~~-----~~~~~slsyNpae~~vLv~~~~~~~~d~--g~yeL~~lpk~~~ 89 (134)
.++.. .+..|+.||+.+.+. +..+.... ..+...+.++|....+|++.. .|+ +...++.+.....
T Consensus 179 ~~l~~~~~dg~v~iwd~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~----~d~~~~~i~~~d~~~~~~ 252 (416)
T 2pm9_A 179 HVFASAGSSNFASIWDLKAKKE--VIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATAT----GSDNDPSILIWDLRNANT 252 (416)
T ss_dssp TEEEEESSSSCEEEEETTTTEE--EEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEE----CCSSSCCCCEEETTSTTS
T ss_pred cEEEEEcCCCCEEEEECCCCCc--ceEEeccccccccCCceEEEEECCCCCCEEEEEE----CCCCCceEEEEeCCCCCC
Confidence 45554 889999999987543 34444211 457899999999765555544 232 2666666554211
Q ss_pred ccccccC-CccccceeEEEE--eCCeEEEEecCCEEEEEeCCC
Q psy74 90 ERKEVAD-GKRSTGISAVWV--ARNRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 90 ~~~~~~~-~~~g~g~~AvFV--aRNRfAvldk~~~i~Iknl~n 129 (134)
- ...-. ...+...+..|- ..+.+|+-..+++|.|-|++.
T Consensus 253 ~-~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~ 294 (416)
T 2pm9_A 253 P-LQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPES 294 (416)
T ss_dssp C-SBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSS
T ss_pred C-cEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCC
Confidence 0 00112 334444556665 356777777789999999863
No 19
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=91.70 E-value=3.6 Score=31.52 Aligned_cols=106 Identities=10% Similarity=0.073 Sum_probs=63.8
Q ss_pred eCCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCcccccc
Q psy74 16 HNNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEV 94 (134)
Q Consensus 16 ~~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~ 94 (134)
.++.|+-. .+..|+.||+.+.. .+..+....-.+..++.++|.....|++.. +.|...++.+.....- ...
T Consensus 258 ~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~-----~dg~i~vwd~~~~~~~-~~~ 329 (420)
T 3vl1_A 258 YGKYVIAGHVSGVITVHNVFSKE--QTIQLPSKFTCSCNSLTVDGNNANYIYAGY-----ENGMLAQWDLRSPECP-VGE 329 (420)
T ss_dssp TTEEEEEEETTSCEEEEETTTCC--EEEEECCTTSSCEEEEEECSSCTTEEEEEE-----TTSEEEEEETTCTTSC-SEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCc--eeEEcccccCCCceeEEEeCCCCCEEEEEe-----CCCeEEEEEcCCCcCc-hhh
Confidence 34445444 78899999998754 333343333447889999999885555544 4467777766543210 011
Q ss_pred cCCccccceeEEEEeCCeE-EEEecCCEEEEEeCCC
Q psy74 95 ADGKRSTGISAVWVARNRF-AVLDRNHTILIKNLKN 129 (134)
Q Consensus 95 ~~~~~g~g~~AvFVaRNRf-Avldk~~~i~Iknl~n 129 (134)
-....+....++|..-.++ |.-..+++|.|-++..
T Consensus 330 ~~~~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 330 FLINEGTPINNVYFAAGALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp EEESTTSCEEEEEEETTEEEEEETTTEEEEEEEECC
T ss_pred hhccCCCCceEEEeCCCCEEEEecCCccEEEEeccC
Confidence 1122334566667776654 4444488999999864
No 20
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=91.67 E-value=3.5 Score=31.38 Aligned_cols=104 Identities=10% Similarity=0.084 Sum_probs=64.5
Q ss_pred CCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCc-ccccc
Q psy74 17 NNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEES-ERKEV 94 (134)
Q Consensus 17 ~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~-~~~~~ 94 (134)
++.|+-. .+..|+.||+. ..++..+++ ...+...+.++|....+|++.. ..|...++.+..... +....
T Consensus 175 ~~~l~~~~~d~~i~i~d~~---~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~-----~d~~i~iwd~~~~~~~~~~~~ 245 (383)
T 3ei3_B 175 RQMLATGDSTGRLLLLGLD---GHEIFKEKL-HKAKVTHAEFNPRCDWLMATSS-----VDATVKLWDLRNIKDKNSYIA 245 (383)
T ss_dssp TTEEEEEETTSEEEEEETT---SCEEEEEEC-SSSCEEEEEECSSCTTEEEEEE-----TTSEEEEEEGGGCCSTTCEEE
T ss_pred CCEEEEECCCCCEEEEECC---CCEEEEecc-CCCcEEEEEECCCCCCEEEEEe-----CCCEEEEEeCCCCCcccceEE
Confidence 4555555 88999999994 335666663 2346889999999885555544 345777777665321 11111
Q ss_pred cCCccccceeEEEEe--CCeEEEEecCCEEEEEeCCC
Q psy74 95 ADGKRSTGISAVWVA--RNRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 95 ~~~~~g~g~~AvFVa--RNRfAvldk~~~i~Iknl~n 129 (134)
.-...+...+..|-. .+.+|+-..+++|.|-|+..
T Consensus 246 ~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~ 282 (383)
T 3ei3_B 246 EMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYD 282 (383)
T ss_dssp EEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTB
T ss_pred EecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCC
Confidence 112334444455543 35677777789999999863
No 21
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=91.64 E-value=3 Score=31.70 Aligned_cols=107 Identities=14% Similarity=0.173 Sum_probs=63.6
Q ss_pred CCEEEEE-eCCeEEEEECCCCC--ceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCC-----
Q psy74 17 NNVMYYV-KERFLHRLDLTNSK--DSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEE----- 88 (134)
Q Consensus 17 ~n~L~Yv-kek~l~~~D~~t~~--~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~----- 88 (134)
+..|+.. .+..|+.||+.+.. ...+..+.+ .-.+...|.++|.+...|++.. ..|...++.+....
T Consensus 79 ~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~-----~dg~v~iwd~~~~~~~~~~ 152 (416)
T 2pm9_A 79 NKIIAGALDNGSLELYSTNEANNAINSMARFSN-HSSSVKTVKFNAKQDNVLASGG-----NNGEIFIWDMNKCTESPSN 152 (416)
T ss_dssp SSCEEEEESSSCEEEECCSSTTSCCCEEEECCC-SSSCCCEEEECSSSTTBEEEEC-----SSSCEEBCBTTTTSSCTTT
T ss_pred CCeEEEEccCCeEEEeecccccccccchhhccC-CccceEEEEEcCCCCCEEEEEc-----CCCeEEEEECCCCcccccc
Confidence 4445555 78999999999822 235555553 3336789999998544555433 34566666554432
Q ss_pred -c-ccccccCCccccceeEEEEeC--CeEEEEecCCEEEEEeCCC
Q psy74 89 -S-ERKEVADGKRSTGISAVWVAR--NRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 89 -~-~~~~~~~~~~g~g~~AvFVaR--NRfAvldk~~~i~Iknl~n 129 (134)
. -.........+...+..|-.. +.+|+-..+++|.|-|++.
T Consensus 153 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~ 197 (416)
T 2pm9_A 153 YTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKA 197 (416)
T ss_dssp CCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTT
T ss_pred ccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCC
Confidence 1 000011233444555666543 5677767788999999864
No 22
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=90.58 E-value=4.5 Score=30.74 Aligned_cols=97 Identities=11% Similarity=0.139 Sum_probs=62.6
Q ss_pred eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCc-ccc-cccCCcccc
Q psy74 24 KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEES-ERK-EVADGKRST 101 (134)
Q Consensus 24 kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~-~~~-~~~~~~~g~ 101 (134)
.|+.|+.||..+......+.... .....+.+.|....++.. . ..|.-.++.+..... ... ..-.+..+.
T Consensus 75 ~Dg~v~iWd~~~~~~~~~~~~~~---~~v~~~~~s~~~~~l~s~-~-----~d~~v~iw~~~~~~~~~~~~~~~~~h~~~ 145 (340)
T 1got_B 75 QDGKLIIWDSYTTNKVHAIPLRS---SWVMTCAYAPSGNYVACG-G-----LDNICSIYNLKTREGNVRVSRELAGHTGY 145 (340)
T ss_dssp TTTEEEEEETTTCCEEEEEECSS---SCEEEEEECTTSSEEEEE-E-----TTCEEEEEETTTCSBSCEEEEEEECCSSC
T ss_pred CCCcEEEEECCCCCcceEeecCC---ccEEEEEECCCCCEEEEE-e-----CCCeEEEEECccCCCcceeEEEecCCCcc
Confidence 89999999998865443333331 246889999987755544 2 335667776654321 000 011244455
Q ss_pred ceeEEEEeCCeEEEEecCCEEEEEeCCC
Q psy74 102 GISAVWVARNRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 102 g~~AvFVaRNRfAvldk~~~i~Iknl~n 129 (134)
.....|..-++++.-..+++|.|-|++.
T Consensus 146 v~~~~~~~~~~l~s~s~d~~i~~wd~~~ 173 (340)
T 1got_B 146 LSCCRFLDDNQIVTSSGDTTCALWDIET 173 (340)
T ss_dssp EEEEEEEETTEEEEEETTSCEEEEETTT
T ss_pred EEEEEECCCCcEEEEECCCcEEEEECCC
Confidence 6667888889988888888999999853
No 23
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=90.40 E-value=4.7 Score=34.88 Aligned_cols=111 Identities=9% Similarity=0.160 Sum_probs=66.9
Q ss_pred eeeCCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCC-CeEEEEeccCCCCCCceEEEEEccCCCccc
Q psy74 14 TVHNNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATE-HSILVTTRNANNFENSTYDLYMIPKEESER 91 (134)
Q Consensus 14 ~~~~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae-~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~ 91 (134)
.-.++.|.-. .++.|+.||+.+.....+..++| ...+.+.|.++|.. ...|++.. ..|..-++.+.......
T Consensus 18 s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~-h~~~V~~l~~s~~~~~~~l~s~s-----~Dg~I~vwd~~~~~~~~ 91 (753)
T 3jro_A 18 DYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTG-HEGPVWRVDWAHPKFGTILASCS-----YDGKVLIWKEENGRWSQ 91 (753)
T ss_dssp CSSSCCEEEEETTTEEEEEEEETTEEEEEEEECC-CSSCEEEEEECCTTSCSEEEEEE-----TTSCEEEEEEETTEEEE
T ss_pred CCCCCeEEEEECCCcEEEEecCCCCCccceeccC-CcCceEEEEecCCCCCCEEEEEe-----CCCeEEEEECCCCcccc
Confidence 3345666666 89999999998755556666664 34478999998773 34444433 33456665544321001
Q ss_pred ccccCCccccceeEEEEe---CCeEEEEecCCEEEEEeCCCc
Q psy74 92 KEVADGKRSTGISAVWVA---RNRFAVLDRNHTILIKNLKNE 130 (134)
Q Consensus 92 ~~~~~~~~g~g~~AvFVa---RNRfAvldk~~~i~Iknl~n~ 130 (134)
........+...+..|-. .+.+|+-..+++|.|-|+...
T Consensus 92 ~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 92 IAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 133 (753)
T ss_dssp EEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSS
T ss_pred cccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecC
Confidence 111123334344455544 457888888999999998654
No 24
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=90.04 E-value=4.9 Score=30.71 Aligned_cols=108 Identities=10% Similarity=0.173 Sum_probs=60.2
Q ss_pred eCCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCcccccc
Q psy74 16 HNNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEV 94 (134)
Q Consensus 16 ~~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~ 94 (134)
.+..|.-. .|+.|+.||+.+..-.....+....-.+.+.|.++|....++..+. | |...+..+..........
T Consensus 27 ~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~-----D-~~v~iw~~~~~~~~~~~~ 100 (345)
T 3fm0_A 27 AGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF-----D-ATTCIWKKNQDDFECVTT 100 (345)
T ss_dssp TSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEET-----T-SCEEEEEECCC-EEEEEE
T ss_pred CCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEEC-----C-CcEEEEEccCCCeEEEEE
Confidence 44555555 8999999999875433333333223446889999997765555432 3 344444433221000011
Q ss_pred cCCccccceeEEEEe-CCeEEEEecCCEEEEEeCCC
Q psy74 95 ADGKRSTGISAVWVA-RNRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 95 ~~~~~g~g~~AvFVa-RNRfAvldk~~~i~Iknl~n 129 (134)
-+++.+...+..|-. .+.+|.-..+++|.|-|++.
T Consensus 101 ~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~ 136 (345)
T 3fm0_A 101 LEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDE 136 (345)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECT
T ss_pred ccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCC
Confidence 123344445555543 34566666688888888853
No 25
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=90.03 E-value=6.3 Score=31.55 Aligned_cols=105 Identities=10% Similarity=0.036 Sum_probs=67.0
Q ss_pred eCCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEecc----------CCCeEEEEeccCCCCCCceEEEEEc
Q psy74 16 HNNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNA----------TEHSILVTTRNANNFENSTYDLYMI 84 (134)
Q Consensus 16 ~~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNp----------ae~~vLv~~~~~~~~d~g~yeL~~l 84 (134)
.+..|... .+..|+.||+.+.+. +..+.+....+...+.+.| .... |++.. +.|...++.+
T Consensus 499 ~g~~l~~~~~dg~i~iw~~~~~~~--~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~-l~~~~-----~dg~i~iw~~ 570 (615)
T 1pgu_A 499 SETYIAAGDVMGKILLYDLQSREV--KTSRWAFRTSKINAISWKPAEKGANEEEIEEDL-VATGS-----LDTNIFIYSV 570 (615)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEE--EECCSCCCSSCEEEEEECCCC------CCSCCE-EEEEE-----TTSCEEEEES
T ss_pred CCCEEEEcCCCCeEEEeeCCCCcc--eeEeecCCCCceeEEEEcCccccccccccCCCE-EEEEc-----CCCcEEEEEC
Confidence 45556666 789999999987433 3334443455789999999 4444 44433 3457777776
Q ss_pred cCCCcccccccCCccccceeEEEEeCCeEEEEecCCEEEEEeCCC
Q psy74 85 PKEESERKEVADGKRSTGISAVWVARNRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 85 pk~~~~~~~~~~~~~g~g~~AvFVaRNRfAvldk~~~i~Iknl~n 129 (134)
..... ....-....+.-.+..|-.-.+++.-..+++|.|-+++-
T Consensus 571 ~~~~~-~~~~~~~h~~~v~~l~~s~~~~l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 571 KRPMK-IIKALNAHKDGVNNLLWETPSTLVSSGADACIKRWNVVL 614 (615)
T ss_dssp SCTTC-CEEETTSSTTCEEEEEEEETTEEEEEETTSCEEEEEEC-
T ss_pred CCCce-echhhhcCccceEEEEEcCCCCeEEecCCceEEEEeeec
Confidence 54321 111123455556777888888866666688999988864
No 26
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=90.03 E-value=4.7 Score=30.01 Aligned_cols=106 Identities=9% Similarity=0.057 Sum_probs=60.6
Q ss_pred CCEEEEE-eCCeEEEEECCCCCceeeE-EeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCC------
Q psy74 17 NNVMYYV-KERFLHRLDLTNSKDSVVM-QLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEE------ 88 (134)
Q Consensus 17 ~n~L~Yv-kek~l~~~D~~t~~~~~~~-slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~------ 88 (134)
++.|+.. .++.|+.||+.+.....+. .+......+...|.++|....++..+ ..|...++.+....
T Consensus 108 ~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~------~dg~i~~~d~~~~~~~~~~~ 181 (372)
T 1k8k_C 108 EKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGS------CDFKCRIFSAYIKEVEERPA 181 (372)
T ss_dssp SSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEE------TTSCEEEEECCCTTTSCCCC
T ss_pred CCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEc------CCCCEEEEEccccccccccc
Confidence 4455555 7899999999986543332 33233345789999999777665553 33456666542110
Q ss_pred ---------ccccc-ccCCccccceeEEEEeC-CeEEEEecCCEEEEEeCC
Q psy74 89 ---------SERKE-VADGKRSTGISAVWVAR-NRFAVLDRNHTILIKNLK 128 (134)
Q Consensus 89 ---------~~~~~-~~~~~~g~g~~AvFVaR-NRfAvldk~~~i~Iknl~ 128 (134)
.+..- .-....+...+..|-.- +.+|+-..+++|.|-|+.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 232 (372)
T 1k8k_C 182 PTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADAD 232 (372)
T ss_dssp CBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGG
T ss_pred ccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 01100 11122333444455433 356666668899999984
No 27
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=89.98 E-value=4.5 Score=29.81 Aligned_cols=103 Identities=10% Similarity=0.198 Sum_probs=61.3
Q ss_pred EEEEE--eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCc-cccccc
Q psy74 19 VMYYV--KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEES-ERKEVA 95 (134)
Q Consensus 19 ~L~Yv--kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~-~~~~~~ 95 (134)
.++.+ .+..|+.||+.+.+. +..+++ .-.+...|.++|.+...|++.. +.|...++.+..... ......
T Consensus 86 ~~l~~~~~dg~i~v~d~~~~~~--~~~~~~-~~~~i~~~~~~~~~~~~l~s~~-----~dg~i~iwd~~~~~~~~~~~~~ 157 (366)
T 3k26_A 86 PLLAVAGSRGIIRIINPITMQC--IKHYVG-HGNAINELKFHPRDPNLLLSVS-----KDHALRLWNIQTDTLVAIFGGV 157 (366)
T ss_dssp EEEEEEETTCEEEEECTTTCCE--EEEEES-CCSCEEEEEECSSCTTEEEEEE-----TTSCEEEEETTTTEEEEEECST
T ss_pred CEEEEecCCCEEEEEEchhceE--eeeecC-CCCcEEEEEECCCCCCEEEEEe-----CCCeEEEEEeecCeEEEEeccc
Confidence 34444 888999999987543 344443 2336889999995555555544 345677776654321 110001
Q ss_pred CCccccceeEEEEeC-CeEEEEecCCEEEEEeCCC
Q psy74 96 DGKRSTGISAVWVAR-NRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 96 ~~~~g~g~~AvFVaR-NRfAvldk~~~i~Iknl~n 129 (134)
....+...+..|-.. +.+++-..+++|.|-|+..
T Consensus 158 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 192 (366)
T 3k26_A 158 EGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINS 192 (366)
T ss_dssp TSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCS
T ss_pred ccccCceeEEEECCCCCEEEEecCCCCEEEEECCC
Confidence 234444455555433 4566666788999999864
No 28
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=89.87 E-value=5.2 Score=30.32 Aligned_cols=101 Identities=10% Similarity=0.154 Sum_probs=58.2
Q ss_pred eCCEEEEE--eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCc-ccc
Q psy74 16 HNNVMYYV--KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEES-ERK 92 (134)
Q Consensus 16 ~~n~L~Yv--kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~-~~~ 92 (134)
.+..||.. .+..|+.||+.+.+-. ..+.... .+..+.+.|...-++++.. +.+...++.+..... ...
T Consensus 42 dg~~l~~~~~~d~~i~v~d~~~~~~~--~~~~~~~--~v~~~~~spdg~~l~~~~~-----~~~~v~v~d~~~~~~~~~~ 112 (391)
T 1l0q_A 42 DGTKVYVANAHSNDVSIIDTATNNVI--ATVPAGS--SPQGVAVSPDGKQVYVTNM-----ASSTLSVIDTTSNTVAGTV 112 (391)
T ss_dssp TSSEEEEEEGGGTEEEEEETTTTEEE--EEEECSS--SEEEEEECTTSSEEEEEET-----TTTEEEEEETTTTEEEEEE
T ss_pred CCCEEEEECCCCCeEEEEECCCCeEE--EEEECCC--CccceEECCCCCEEEEEEC-----CCCEEEEEECCCCeEEEEE
Confidence 45567776 7899999999875433 3333212 7889999998887777643 445566655432211 110
Q ss_pred cccCCccccceeEEEEeCCe-EEEEec-CCEEEEEeCCC
Q psy74 93 EVADGKRSTGISAVWVARNR-FAVLDR-NHTILIKNLKN 129 (134)
Q Consensus 93 ~~~~~~~g~g~~AvFVaRNR-fAvldk-~~~i~Iknl~n 129 (134)
.. .+...+..|-.-.+ +++... +++|.+-|+..
T Consensus 113 ---~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 147 (391)
T 1l0q_A 113 ---KT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVT 147 (391)
T ss_dssp ---EC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred ---eC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 01 11123334443344 445554 78888888753
No 29
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=89.86 E-value=4.6 Score=29.72 Aligned_cols=108 Identities=10% Similarity=0.157 Sum_probs=62.5
Q ss_pred CCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCc-cccc-
Q psy74 17 NNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEES-ERKE- 93 (134)
Q Consensus 17 ~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~-~~~~- 93 (134)
++.|+-. .+..|+.||+.+.+....+.. -.++..+.++|....+++.... .....|...++.+..... ....
T Consensus 86 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~~-~~~~~g~i~~~d~~~~~~~~~~~~ 160 (369)
T 3zwl_B 86 TKYCVTGSADYSIKLWDVSNGQCVATWKS----PVPVKRVEFSPCGNYFLAILDN-VMKNPGSINIYEIERDSATHELTK 160 (369)
T ss_dssp SSEEEEEETTTEEEEEETTTCCEEEEEEC----SSCEEEEEECTTSSEEEEEECC-BTTBCCEEEEEEEEECTTTCCEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEeec----CCCeEEEEEccCCCEEEEecCC-ccCCCCEEEEEEecCCccceeecc
Confidence 4555555 889999999998665444432 2267899999988877776441 111236677776554422 0000
Q ss_pred -------ccCCccc--cceeEEEEeCC-eEEEEecCCEEEEEeCCC
Q psy74 94 -------VADGKRS--TGISAVWVARN-RFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 94 -------~~~~~~g--~g~~AvFVaRN-RfAvldk~~~i~Iknl~n 129 (134)
......+ ...+..|-... .+|+-..+++|.|.|+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 206 (369)
T 3zwl_B 161 VSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSN 206 (369)
T ss_dssp ECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTT
T ss_pred cccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCC
Confidence 0001111 23334444433 455556688999999975
No 30
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=89.19 E-value=7.7 Score=32.62 Aligned_cols=104 Identities=12% Similarity=0.124 Sum_probs=65.9
Q ss_pred eCCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCcccccc
Q psy74 16 HNNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEV 94 (134)
Q Consensus 16 ~~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~ 94 (134)
.++.|.-. .+..|+.||+.+.+.. ..+.+ .-.+.+.+.++|....++..+ ++|...++.+.....- ...
T Consensus 66 ~~~~l~~~~~dg~i~vw~~~~~~~~--~~~~~-~~~~v~~~~~s~~~~~l~~~~------~dg~i~vw~~~~~~~~-~~~ 135 (814)
T 3mkq_A 66 RKNWIIVGSDDFRIRVFNYNTGEKV--VDFEA-HPDYIRSIAVHPTKPYVLSGS------DDLTVKLWNWENNWAL-EQT 135 (814)
T ss_dssp GGTEEEEEETTSEEEEEETTTCCEE--EEEEC-CSSCEEEEEECSSSSEEEEEE------TTSEEEEEEGGGTSEE-EEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEE--EEEec-CCCCEEEEEEeCCCCEEEEEc------CCCEEEEEECCCCceE-EEE
Confidence 45556665 7899999999986543 33332 223688999999888766542 4567778776543110 001
Q ss_pred cCCccccceeEEEEe--CCeEEEEecCCEEEEEeCCC
Q psy74 95 ADGKRSTGISAVWVA--RNRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 95 ~~~~~g~g~~AvFVa--RNRfAvldk~~~i~Iknl~n 129 (134)
-....+...+..|-. .+.+++-..+++|.|-++..
T Consensus 136 ~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~ 172 (814)
T 3mkq_A 136 FEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQ 172 (814)
T ss_dssp EECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTC
T ss_pred EcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 123334455666763 46777777789999999853
No 31
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=88.99 E-value=6.6 Score=33.96 Aligned_cols=106 Identities=10% Similarity=0.111 Sum_probs=64.0
Q ss_pred CCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccC--CCeEEEEeccCCCCCCceEEEEEccCCCccccc
Q psy74 17 NNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNAT--EHSILVTTRNANNFENSTYDLYMIPKEESERKE 93 (134)
Q Consensus 17 ~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpa--e~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~ 93 (134)
++.|+-. .|+.|+.||+.+..-..+..+.+ .-.+...+.++|. ...++.. . .+|..-++.+.........
T Consensus 67 ~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~~l~sg-s-----~dg~I~vwdl~~~~~~~~~ 139 (753)
T 3jro_A 67 GTILASCSYDGKVLIWKEENGRWSQIAVHAV-HSASVNSVQWAPHEYGPLLLVA-S-----SDGKVSVVEFKENGTTSPI 139 (753)
T ss_dssp CSEEEEEETTSCEEEEEEETTEEEEEEEECC-CSSCEEEEEECCGGGCSEEEEE-E-----TTSEEEEEECCSSSCCCCE
T ss_pred CCEEEEEeCCCeEEEEECCCCcccccccccC-CCCCeEEEEECCCCCCCEEEEE-e-----CCCcEEEEEeecCCCccee
Confidence 4455555 88999999999865445555553 3346889999998 4554444 2 3456666665443211111
Q ss_pred ccCCccccceeEEEEe--------------CCeEEEEecCCEEEEEeCCC
Q psy74 94 VADGKRSTGISAVWVA--------------RNRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 94 ~~~~~~g~g~~AvFVa--------------RNRfAvldk~~~i~Iknl~n 129 (134)
......+...+..|-. .+.+|+-..+++|.|-|+..
T Consensus 140 ~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~ 189 (753)
T 3jro_A 140 IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNS 189 (753)
T ss_dssp EEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEET
T ss_pred EeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccC
Confidence 1123334444555544 45677777788899988753
No 32
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=88.97 E-value=7.3 Score=30.77 Aligned_cols=64 Identities=5% Similarity=0.004 Sum_probs=43.0
Q ss_pred eCCEEEEE-eCCeEEEEECCCCCceeeEEeec----------------------CCCCCceEEEeccCCCeEEEEeccCC
Q psy74 16 HNNVMYYV-KERFLHRLDLTNSKDSVVMQLRG----------------------GGRIPAHSISYNATEHSILVTTRNAN 72 (134)
Q Consensus 16 ~~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg----------------------~~~~~~~slsyNpae~~vLv~~~~~~ 72 (134)
.++.|+.. .++.|+.||+.+.+-...+.+.. ..-.....|.+.|....+++...
T Consensus 251 d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~--- 327 (450)
T 2vdu_B 251 KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVE--- 327 (450)
T ss_dssp STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEET---
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEEC---
Confidence 45566666 89999999999866544444321 11234678899998888877754
Q ss_pred CCCCceEEEEEc
Q psy74 73 NFENSTYDLYMI 84 (134)
Q Consensus 73 ~~d~g~yeL~~l 84 (134)
+.+.-.++.+
T Consensus 328 --~d~~i~iw~~ 337 (450)
T 2vdu_B 328 --ATKCIIILEM 337 (450)
T ss_dssp --TCSEEEEEEE
T ss_pred --CCCeEEEEEe
Confidence 4457777777
No 33
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=88.87 E-value=5.6 Score=29.30 Aligned_cols=103 Identities=10% Similarity=0.143 Sum_probs=59.4
Q ss_pred eCCEEEEE-eCCeEEEEECCCCCceeeEEee---cCCCCCceEEE----eccCCCeEEEEeccCCCCCCceEEEEEccCC
Q psy74 16 HNNVMYYV-KERFLHRLDLTNSKDSVVMQLR---GGGRIPAHSIS----YNATEHSILVTTRNANNFENSTYDLYMIPKE 87 (134)
Q Consensus 16 ~~n~L~Yv-kek~l~~~D~~t~~~~~~~slr---g~~~~~~~sls----yNpae~~vLv~~~~~~~~d~g~yeL~~lpk~ 87 (134)
.++.|+.. .++.|+.||+.+.. .++..++ |..-.+..++. ++|....++..+ +.|...++.+...
T Consensus 128 ~~~~l~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~------~d~~i~i~d~~~~ 200 (357)
T 3i2n_A 128 GAPEIVTGSRDGTVKVWDPRQKD-DPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGY------DNGDIKLFDLRNM 200 (357)
T ss_dssp CCCEEEEEETTSCEEEECTTSCS-SCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEE------TTSEEEEEETTTT
T ss_pred CccEEEEEeCCCeEEEEeCCCCC-CcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEc------cCCeEEEEECccC
Confidence 34456655 88999999999754 2344444 33334566776 566666555543 3456666655433
Q ss_pred CcccccccCCccccceeEEEE----eCCeEEEEecCCEEEEEeCC
Q psy74 88 ESERKEVADGKRSTGISAVWV----ARNRFAVLDRNHTILIKNLK 128 (134)
Q Consensus 88 ~~~~~~~~~~~~g~g~~AvFV----aRNRfAvldk~~~i~Iknl~ 128 (134)
.. .......+...+..|- ..+.+++-..+++|.|-++.
T Consensus 201 ~~---~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 242 (357)
T 3i2n_A 201 AL---RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMR 242 (357)
T ss_dssp EE---EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEE
T ss_pred ce---eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCc
Confidence 21 0111223334555565 35777777778899988874
No 34
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=88.78 E-value=7.5 Score=30.69 Aligned_cols=106 Identities=12% Similarity=0.080 Sum_probs=58.9
Q ss_pred eCCEEEEE--eCCeEEEEECC--CCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCccc
Q psy74 16 HNNVMYYV--KERFLHRLDLT--NSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESER 91 (134)
Q Consensus 16 ~~n~L~Yv--kek~l~~~D~~--t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~ 91 (134)
.+..|+.+ .++.|+.||+. +......+.-.+ .-..+..|.++|....+++.+. ++ .--++.+.......
T Consensus 113 d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~-----~g-~v~~~~~~~~~~~~ 185 (450)
T 2vdu_B 113 DESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFC-FSKRPNAISIAEDDTTVIIADK-----FG-DVYSIDINSIPEEK 185 (450)
T ss_dssp TSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEE-CSSCEEEEEECTTSSEEEEEET-----TS-EEEEEETTSCCCSS
T ss_pred CCCEEEEEECCCCeEEEEECcCCCCceeeeeeccc-CCCCceEEEEcCCCCEEEEEeC-----CC-cEEEEecCCccccc
Confidence 45556565 78999999998 544443333221 2235789999998877766633 43 33333333221110
Q ss_pred --ccccCCccccceeEEEEeC---C-eEEEEecCCEEEEEeCC
Q psy74 92 --KEVADGKRSTGISAVWVAR---N-RFAVLDRNHTILIKNLK 128 (134)
Q Consensus 92 --~~~~~~~~g~g~~AvFVaR---N-RfAvldk~~~i~Iknl~ 128 (134)
...-....+...+..|-.- + .+|.-+.+++|.|-|+.
T Consensus 186 ~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~ 228 (450)
T 2vdu_B 186 FTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYP 228 (450)
T ss_dssp CCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEES
T ss_pred ccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECC
Confidence 0011123333344455543 4 45555668899999985
No 35
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=88.74 E-value=6.8 Score=30.17 Aligned_cols=105 Identities=10% Similarity=0.120 Sum_probs=63.2
Q ss_pred CEEEEE--eCCeEEEEECCCCCc-----eeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCc-
Q psy74 18 NVMYYV--KERFLHRLDLTNSKD-----SVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEES- 89 (134)
Q Consensus 18 n~L~Yv--kek~l~~~D~~t~~~-----~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~- 89 (134)
+.++.. .|..|+.||+.+... .++..+.|. -.+...|.++|....+|++.. ..|...++.+.....
T Consensus 94 ~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~p~~~~~l~s~~-----~dg~i~iwd~~~~~~~ 167 (402)
T 2aq5_A 94 DNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGH-TKRVGIVAWHPTAQNVLLSAG-----CDNVILVWDVGTGAAV 167 (402)
T ss_dssp TTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECC-SSCEEEEEECSSBTTEEEEEE-----TTSCEEEEETTTTEEE
T ss_pred CCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCC-CCeEEEEEECcCCCCEEEEEc-----CCCEEEEEECCCCCcc
Confidence 334444 789999999998532 456666642 236789999999755555544 334566665543211
Q ss_pred ccccccCCccccceeEEEEe-CCeEEEEecCCEEEEEeCCC
Q psy74 90 ERKEVADGKRSTGISAVWVA-RNRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 90 ~~~~~~~~~~g~g~~AvFVa-RNRfAvldk~~~i~Iknl~n 129 (134)
... ......+...+..|-. -+.+|+-..+++|.|-|+..
T Consensus 168 ~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 207 (402)
T 2aq5_A 168 LTL-GPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRK 207 (402)
T ss_dssp EEE-CTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTT
T ss_pred EEE-ecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCC
Confidence 000 0023344445555553 34677777788999999864
No 36
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=88.30 E-value=7.6 Score=30.16 Aligned_cols=104 Identities=13% Similarity=0.158 Sum_probs=61.0
Q ss_pred CCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCc-ccccc
Q psy74 17 NNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEES-ERKEV 94 (134)
Q Consensus 17 ~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~-~~~~~ 94 (134)
++.|.-. .|+.|+.||+.+.+ .+..++| .-.+...+.++|....+|++.. .| |+--+..+..... ....
T Consensus 139 g~~l~sgs~d~~i~iwd~~~~~--~~~~~~~-h~~~V~~~~~~~~~~~~l~s~s----~D-~~v~iwd~~~~~~~~~~~- 209 (344)
T 4gqb_B 139 GTQAVSGSKDICIKVWDLAQQV--VLSSYRA-HAAQVTCVAASPHKDSVFLSCS----ED-NRILLWDTRCPKPASQIG- 209 (344)
T ss_dssp SSEEEEEETTSCEEEEETTTTE--EEEEECC-CSSCEEEEEECSSCTTEEEEEE----TT-SCEEEEETTSSSCEEECC-
T ss_pred CCEEEEEeCCCeEEEEECCCCc--EEEEEcC-cCCceEEEEecCCCCCceeeec----cc-cccccccccccceeeeee-
Confidence 4445555 89999999998753 4455554 2336789999999888877654 34 4566665432211 1110
Q ss_pred cCCccccceeEEEEeC--CeEEEEecCCEEEEEeCCC
Q psy74 95 ADGKRSTGISAVWVAR--NRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 95 ~~~~~g~g~~AvFVaR--NRfAvldk~~~i~Iknl~n 129 (134)
.........+..|-.. +-+|.=..+++|.|-|+..
T Consensus 210 ~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~ 246 (344)
T 4gqb_B 210 CSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKS 246 (344)
T ss_dssp ----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC
T ss_pred cceeeccceeeeecCCCCcceEEeccCCcEEEEECCC
Confidence 1111122345556543 3355556688999998853
No 37
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=87.88 E-value=8.9 Score=30.47 Aligned_cols=108 Identities=14% Similarity=0.221 Sum_probs=58.4
Q ss_pred CcceeeCCEEEEE-eCC---eEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccC
Q psy74 11 PAYTVHNNVMYYV-KER---FLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPK 86 (134)
Q Consensus 11 Pa~~~~~n~L~Yv-kek---~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk 86 (134)
|+|.-.+..|+|+ .++ .|+.||+.+++... +.+. -.....+.++|....++++.. .+|..+|+.+.-
T Consensus 184 ~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~---l~~~-~~~~~~~~~spdg~~la~~~~-----~~g~~~i~~~d~ 254 (415)
T 2hqs_A 184 PAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ---VASF-PRHNGAPAFSPDGSKLAFALS-----KTGSLNLYVMDL 254 (415)
T ss_dssp EEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE---EECC-SSCEEEEEECTTSSEEEEEEC-----TTSSCEEEEEET
T ss_pred eEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEE---eecC-CCcccCEEEcCCCCEEEEEEe-----cCCCceEEEEEC
Confidence 4555567889998 443 89999999865432 3311 115678999998887776543 233455665543
Q ss_pred CCcccccccCCccccceeEEEEeCCe-EEEEec-CC--EEEEEeCC
Q psy74 87 EESERKEVADGKRSTGISAVWVARNR-FAVLDR-NH--TILIKNLK 128 (134)
Q Consensus 87 ~~~~~~~~~~~~~g~g~~AvFVaRNR-fAvldk-~~--~i~Iknl~ 128 (134)
... ....-....+...+..|-.-.+ +|+... .+ +|.+.|++
T Consensus 255 ~~~-~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~ 299 (415)
T 2hqs_A 255 ASG-QIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNIN 299 (415)
T ss_dssp TTC-CEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred CCC-CEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECC
Confidence 221 1111112222333444543334 444432 33 56666765
No 38
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=87.70 E-value=7 Score=29.05 Aligned_cols=111 Identities=10% Similarity=0.150 Sum_probs=65.5
Q ss_pred ceeeCCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccC-CCeEEEEeccCCCCCCceEEEEEccCCCcc
Q psy74 13 YTVHNNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNAT-EHSILVTTRNANNFENSTYDLYMIPKEESE 90 (134)
Q Consensus 13 ~~~~~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpa-e~~vLv~~~~~~~~d~g~yeL~~lpk~~~~ 90 (134)
|.-.+..|.=. .|+.|+.||+.+.....+..++| .-.+...+.++|. +...|++.. ..|+.-+..+......
T Consensus 17 ~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~g-H~~~V~~v~~s~~~~g~~l~s~s-----~D~~v~iWd~~~~~~~ 90 (297)
T 2pm7_B 17 MDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTG-HEGPVWRVDWAHPKFGTILASCS-----YDGKVMIWKEENGRWS 90 (297)
T ss_dssp ECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECC-CSSCEEEEEECCGGGCSEEEEEE-----TTTEEEEEEBSSSCBC
T ss_pred ECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEcc-ccCCeEEEEecCCCcCCEEEEEc-----CCCEEEEEEcCCCceE
Confidence 33345556555 89999999998654455666764 2236789999754 445666544 3356666655432100
Q ss_pred cccccCCccccceeEEEEe---CCeEEEEecCCEEEEEeCCC
Q psy74 91 RKEVADGKRSTGISAVWVA---RNRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 91 ~~~~~~~~~g~g~~AvFVa---RNRfAvldk~~~i~Iknl~n 129 (134)
....-....+...+..|-. -+.+|+-..+++|.|-++..
T Consensus 91 ~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~ 132 (297)
T 2pm7_B 91 QIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKE 132 (297)
T ss_dssp CCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCS
T ss_pred EEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecC
Confidence 0001112333344555554 35677777788999998864
No 39
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=86.97 E-value=7.4 Score=28.58 Aligned_cols=103 Identities=7% Similarity=-0.009 Sum_probs=64.2
Q ss_pred eCCEEEEE-eCCeEEEEECCCCC-ceeeEEeecCCCCCceEEEeccCCC-eEEEEeccCCCCCCceEEEEEc-cCCCccc
Q psy74 16 HNNVMYYV-KERFLHRLDLTNSK-DSVVMQLRGGGRIPAHSISYNATEH-SILVTTRNANNFENSTYDLYMI-PKEESER 91 (134)
Q Consensus 16 ~~n~L~Yv-kek~l~~~D~~t~~-~~~~~slrg~~~~~~~slsyNpae~-~vLv~~~~~~~~d~g~yeL~~l-pk~~~~~ 91 (134)
.++.|+.. .+..|+.||+.+.. ..++..+.+ .-.+...+.++|... .++... ..|..-++.+ .....
T Consensus 22 ~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~------~dg~i~~wd~~~~~~~-- 92 (342)
T 1yfq_A 22 SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLR-YKHPLLCCNFIDNTDLQIYVGT------VQGEILKVDLIGSPSF-- 92 (342)
T ss_dssp GGTEEEEEETTSEEEEEEEETTTTEEEEEEEEE-CSSCEEEEEEEESSSEEEEEEE------TTSCEEEECSSSSSSE--
T ss_pred CCCEEEEEcCCCeEEEEEeCCCCccccceeeee-cCCceEEEEECCCCCcEEEEEc------CCCeEEEEEeccCCce--
Confidence 45566665 89999999999844 444444442 223678999999877 555542 3356666655 33321
Q ss_pred ccccCC--ccccceeEEEEeCCeEEEEecCCEEEEEeCC
Q psy74 92 KEVADG--KRSTGISAVWVARNRFAVLDRNHTILIKNLK 128 (134)
Q Consensus 92 ~~~~~~--~~g~g~~AvFVaRNRfAvldk~~~i~Iknl~ 128 (134)
..-.. ..+.-.+..|-..+.+++-..+++|.|-|+.
T Consensus 93 -~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~ 130 (342)
T 1yfq_A 93 -QALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPR 130 (342)
T ss_dssp -EECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHH
T ss_pred -EeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEccc
Confidence 11122 4444455566656677777778999998875
No 40
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=86.50 E-value=9.1 Score=29.15 Aligned_cols=104 Identities=13% Similarity=0.180 Sum_probs=58.6
Q ss_pred CCEEEEE-eCCeEEEEECCCCCcee-eEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCcccccc
Q psy74 17 NNVMYYV-KERFLHRLDLTNSKDSV-VMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEV 94 (134)
Q Consensus 17 ~n~L~Yv-kek~l~~~D~~t~~~~~-~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~ 94 (134)
++.|.-. .|+.|+.||+.+..... +..+.+ .-.+...+.++|....++..+ ..|...++.+....-.....
T Consensus 117 ~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s~s------~d~~i~~w~~~~~~~~~~~~ 189 (345)
T 3fm0_A 117 GNLLATCSRDKSVWVWEVDEEDEYECVSVLNS-HTQDVKHVVWHPSQELLASAS------YDDTVKLYREEEDDWVCCAT 189 (345)
T ss_dssp SSEEEEEETTSCEEEEEECTTSCEEEEEEECC-CCSCEEEEEECSSSSCEEEEE------TTSCEEEEEEETTEEEEEEE
T ss_pred CCEEEEEECCCeEEEEECCCCCCeEEEEEecC-cCCCeEEEEECCCCCEEEEEe------CCCcEEEEEecCCCEEEEEE
Confidence 4555555 89999999998855433 333333 334678999999887655543 33456666543321000001
Q ss_pred cCCccccceeEEEEeC-CeEEEEecCCEEEEEeC
Q psy74 95 ADGKRSTGISAVWVAR-NRFAVLDRNHTILIKNL 127 (134)
Q Consensus 95 ~~~~~g~g~~AvFVaR-NRfAvldk~~~i~Iknl 127 (134)
-++..+...+..|-.. +.+|.-..+++|.|-++
T Consensus 190 ~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 190 LEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred ecCCCCceEEEEECCCCCEEEEEeCCCeEEEecc
Confidence 1233343444555433 35666666788888764
No 41
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=86.26 E-value=7.3 Score=30.07 Aligned_cols=101 Identities=11% Similarity=0.164 Sum_probs=61.5
Q ss_pred CEEEEE--eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCccccccc
Q psy74 18 NVMYYV--KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVA 95 (134)
Q Consensus 18 n~L~Yv--kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~~ 95 (134)
+.++.+ .+..|+.||+.+.+. +..+++ ...+...|.|+|....+|++.. +.|+..++.+.. +..-..
T Consensus 239 ~~~la~g~~d~~i~~wd~~~~~~--~~~~~~-~~~~v~~l~~sp~~~~~lasgs-----~D~~i~iwd~~~---~~~~~~ 307 (357)
T 4g56_B 239 DDTFACGDETGNVSLVNIKNPDS--AQTSAV-HSQNITGLAYSYHSSPFLASIS-----EDCTVAVLDADF---SEVFRD 307 (357)
T ss_dssp TTEEEEEESSSCEEEEESSCGGG--CEEECC-CSSCEEEEEECSSSSCCEEEEE-----TTSCEEEECTTS---CEEEEE
T ss_pred cceEEEeecccceeEEECCCCcE--eEEEec-cceeEEEEEEcCCCCCEEEEEe-----CCCEEEEEECCC---CcEeEE
Confidence 445655 788999999987543 334443 2236789999998766666543 334555554321 111112
Q ss_pred CCccccceeEEEE--eCCeEEEEecCCEEEEEeCCC
Q psy74 96 DGKRSTGISAVWV--ARNRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 96 ~~~~g~g~~AvFV--aRNRfAvldk~~~i~Iknl~n 129 (134)
-..++...+..|= ..+.||.-..+++|.|-++..
T Consensus 308 ~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 308 LSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred CCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 2344545556663 356788777789999999853
No 42
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=86.18 E-value=8.2 Score=28.32 Aligned_cols=108 Identities=8% Similarity=0.053 Sum_probs=58.8
Q ss_pred eCCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccC------CCCCCc--eEEEEEccC
Q psy74 16 HNNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNA------NNFENS--TYDLYMIPK 86 (134)
Q Consensus 16 ~~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~------~~~d~g--~yeL~~lpk 86 (134)
.++.|+.. .++.|+.||+.+.+-...+. .-.+...+.+.|....+++..... ...+.+ ...++.+..
T Consensus 229 ~~~~l~~~~~d~~i~v~d~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 304 (369)
T 3zwl_B 229 DLTYFITSSRDTNSFLVDVSTLQVLKKYE----TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIF 304 (369)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCEEEEEE----CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTT
T ss_pred CCCEEEEecCCceEEEEECCCCceeeeec----CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCC
Confidence 34455555 78999999998855433333 223578899999998888875410 000112 223332221
Q ss_pred CCcccccccCCccccceeEEEEeCC-eEEEEecCCEEEEEeCCC
Q psy74 87 EESERKEVADGKRSTGISAVWVARN-RFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 87 ~~~~~~~~~~~~~g~g~~AvFVaRN-RfAvldk~~~i~Iknl~n 129 (134)
.. ....-....+...+..|-.-. .+|.-..+++|.|-+++.
T Consensus 305 ~~--~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 305 EE--EIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp CC--EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECH
T ss_pred Cc--chhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECcc
Confidence 11 110112233334445554433 566666689999999864
No 43
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=85.62 E-value=9.6 Score=28.58 Aligned_cols=102 Identities=16% Similarity=0.267 Sum_probs=63.2
Q ss_pred CCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCccccccc
Q psy74 17 NNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVA 95 (134)
Q Consensus 17 ~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~~ 95 (134)
++.++.. .+..|+.||+.+... +..+++ ...+...|.++|....++..+ ..|...++.+..... ...-
T Consensus 217 ~~~~~~~~~~g~i~~~d~~~~~~--~~~~~~-~~~~i~~~~~~~~~~~l~~~~------~d~~i~i~d~~~~~~--~~~~ 285 (425)
T 1r5m_A 217 DDKFVIPGPKGAIFVYQITEKTP--TGKLIG-HHGPISVLEFNDTNKLLLSAS------DDGTLRIWHGGNGNS--QNCF 285 (425)
T ss_dssp TTEEEEECGGGCEEEEETTCSSC--SEEECC-CSSCEEEEEEETTTTEEEEEE------TTSCEEEECSSSBSC--SEEE
T ss_pred CCEEEEEcCCCeEEEEEcCCCce--eeeecc-CCCceEEEEECCCCCEEEEEc------CCCEEEEEECCCCcc--ceEe
Confidence 3444444 888999999987533 333442 223678999999887665553 345666765543311 1111
Q ss_pred CCccccceeEEEEeCCeEEEEecCCEEEEEeCCC
Q psy74 96 DGKRSTGISAVWVARNRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 96 ~~~~g~g~~AvFVaRNRfAvldk~~~i~Iknl~n 129 (134)
....+...+..|-..+.+++-..+++|.|-|+++
T Consensus 286 ~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~ 319 (425)
T 1r5m_A 286 YGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQ 319 (425)
T ss_dssp CCCSSCEEEEEEETTTEEEEEETTSEEEEEETTT
T ss_pred cCCCccEEEEEECCCCEEEEEeCCCcEEEEECCC
Confidence 2334445566676666777777789999999854
No 44
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=85.05 E-value=10 Score=28.45 Aligned_cols=108 Identities=15% Similarity=0.219 Sum_probs=61.6
Q ss_pred eCCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEecc-CCCeEEEEeccCCCCCCceEEEEEccCCCccccc
Q psy74 16 HNNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNA-TEHSILVTTRNANNFENSTYDLYMIPKEESERKE 93 (134)
Q Consensus 16 ~~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNp-ae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~ 93 (134)
.++.|.=. .|+.|+.||+.+.....+..++| .-.+...+.+.| .+...|++.. .| |+--+..+....-....
T Consensus 24 ~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~g-H~~~V~~v~~~~~~~~~~l~s~s----~D-~~v~iWd~~~~~~~~~~ 97 (316)
T 3bg1_A 24 YGTRLATCSSDRSVKIFDVRNGGQILIADLRG-HEGPVWQVAWAHPMYGNILASCS----YD-RKVIIWREENGTWEKSH 97 (316)
T ss_dssp GGCEEEEEETTTEEEEEEEETTEEEEEEEEEC-CSSCEEEEEECCGGGSSCEEEEE----TT-SCEEEECCSSSCCCEEE
T ss_pred CCCEEEEEeCCCeEEEEEecCCCcEEEEEEcC-CCccEEEEEeCCCCCCCEEEEEE----CC-CEEEEEECCCCcceEEE
Confidence 45555444 89999999998765556667775 233678899975 3444555433 23 45555544321100000
Q ss_pred ccCCccccceeEEEEe---CCeEEEEecCCEEEEEeCCC
Q psy74 94 VADGKRSTGISAVWVA---RNRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 94 ~~~~~~g~g~~AvFVa---RNRfAvldk~~~i~Iknl~n 129 (134)
.-..+.+...+..|-. .+.+|.-..+++|.|-++..
T Consensus 98 ~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~ 136 (316)
T 3bg1_A 98 EHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTG 136 (316)
T ss_dssp EECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECS
T ss_pred EccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCC
Confidence 1123334445555654 23567666688898888754
No 45
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=84.78 E-value=6.5 Score=29.60 Aligned_cols=107 Identities=7% Similarity=-0.009 Sum_probs=57.4
Q ss_pred CCEEEEE-eCCeEEEEECCCCCce-eeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCc-----
Q psy74 17 NNVMYYV-KERFLHRLDLTNSKDS-VVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEES----- 89 (134)
Q Consensus 17 ~n~L~Yv-kek~l~~~D~~t~~~~-~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~----- 89 (134)
++.|+.. .++.|+.||+.+.... .+..+.+..-.+...+.++|....++..+. | |...++.+.....
T Consensus 112 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-----d-~~i~iwd~~~~~~~~~~~ 185 (377)
T 3dwl_C 112 EDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCA-----D-RKAYVLSAYVRDVDAKPE 185 (377)
T ss_dssp SSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEES-----S-SCEEEEEECCSSCC-CCC
T ss_pred CCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeC-----C-CEEEEEEEEecccCCCcc
Confidence 4556665 8899999999985432 234454434557899999997765555432 3 4555665421110
Q ss_pred ----------ccccccCCccccceeEEEEeCC-eEEEEecCCEEEEEeCCC
Q psy74 90 ----------ERKEVADGKRSTGISAVWVARN-RFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 90 ----------~~~~~~~~~~g~g~~AvFVaRN-RfAvldk~~~i~Iknl~n 129 (134)
+..-..-...+...+..|-.-. .+|+-..+++|.|-|+..
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~ 236 (377)
T 3dwl_C 186 ASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSA 236 (377)
T ss_dssp SCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECS
T ss_pred ccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 0000000223334445554443 466666688999988864
No 46
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=84.76 E-value=8.3 Score=27.13 Aligned_cols=108 Identities=14% Similarity=0.227 Sum_probs=60.2
Q ss_pred cceeeCCEEEEEeCCeEEEEECCC-CCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCcc
Q psy74 12 AYTVHNNVMYYVKERFLHRLDLTN-SKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESE 90 (134)
Q Consensus 12 a~~~~~n~L~Yvkek~l~~~D~~t-~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~ 90 (134)
++.-.+..|++..+..|+.||+.+ .....+. .+.....+..+.++|....+++... .+.+...|+.+......
T Consensus 48 ~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~--~~~~~~~~~~~~~spdg~~l~~~~~----~~~~~~~l~~~~~~~~~ 121 (297)
T 2ojh_A 48 NWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVD--TGFATICNNDHGISPDGALYAISDK----VEFGKSAIYLLPSTGGT 121 (297)
T ss_dssp EECTTSSEEEEEETTEEEEEESSSCCSCEECC--CTTCCCBCSCCEECTTSSEEEEEEC----TTTSSCEEEEEETTCCC
T ss_pred EECCCCCEEEEEcCCeEEEEeCCCCCCceEec--cccccccccceEECCCCCEEEEEEe----CCCCcceEEEEECCCCc
Confidence 344457778888999999999987 5543222 2322335677899998887777754 23356677766543221
Q ss_pred cccccCCccccceeEEEEeCCe-EEEEe-cCCEEEEEeC
Q psy74 91 RKEVADGKRSTGISAVWVARNR-FAVLD-RNHTILIKNL 127 (134)
Q Consensus 91 ~~~~~~~~~g~g~~AvFVaRNR-fAvld-k~~~i~Iknl 127 (134)
...-.. ........|-.-.+ +++.. .++++.|..+
T Consensus 122 -~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~ 158 (297)
T 2ojh_A 122 -PRLMTK-NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSM 158 (297)
T ss_dssp -CEECCS-SSSEEEEEECTTSSEEEEEEEETTEEEEEEE
T ss_pred -eEEeec-CCCccceEECCCCCEEEEEECCCCceEEEEE
Confidence 111101 11133344543344 44333 3666666664
No 47
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=84.55 E-value=9.8 Score=27.79 Aligned_cols=94 Identities=13% Similarity=0.113 Sum_probs=53.9
Q ss_pred eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCcccccccCCccccce
Q psy74 24 KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVADGKRSTGI 103 (134)
Q Consensus 24 kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~~~~~~g~g~ 103 (134)
.+..|+.||+.+.+ .+..+.| .-.+..+|.++|....++..+ ..|...++.+.....- .....+...
T Consensus 193 ~d~~i~i~d~~~~~--~~~~~~~-h~~~v~~~~~s~~~~~l~s~s------~Dg~i~iwd~~~~~~~----~~~~~~~~v 259 (340)
T 4aow_A 193 WDKLVKVWNLANCK--LKTNHIG-HTGYLNTVTVSPDGSLCASGG------KDGQAMLWDLNEGKHL----YTLDGGDII 259 (340)
T ss_dssp TTSCEEEEETTTTE--EEEEECC-CSSCEEEEEECTTSSEEEEEE------TTCEEEEEETTTTEEE----EEEECSSCE
T ss_pred CCCEEEEEECCCCc--eeeEecC-CCCcEEEEEECCCCCEEEEEe------CCCeEEEEEeccCcee----eeecCCceE
Confidence 78899999998743 2333443 223678999999877655542 3346666655433110 001111234
Q ss_pred eEEEEeCCe-EEEEecCCEEEEEeCCCc
Q psy74 104 SAVWVARNR-FAVLDRNHTILIKNLKNE 130 (134)
Q Consensus 104 ~AvFVaRNR-fAvldk~~~i~Iknl~n~ 130 (134)
.++.+..++ +++-..+++|.|-|+++.
T Consensus 260 ~~~~~~~~~~~~~~~~d~~i~iwd~~~~ 287 (340)
T 4aow_A 260 NALCFSPNRYWLCAATGPSIKIWDLEGK 287 (340)
T ss_dssp EEEEECSSSSEEEEEETTEEEEEETTTT
T ss_pred EeeecCCCCceeeccCCCEEEEEECCCC
Confidence 455555554 444444788888888653
No 48
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=84.09 E-value=11 Score=27.81 Aligned_cols=104 Identities=10% Similarity=0.021 Sum_probs=56.6
Q ss_pred eCCEEEEE-eCC----eEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCc-
Q psy74 16 HNNVMYYV-KER----FLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEES- 89 (134)
Q Consensus 16 ~~n~L~Yv-kek----~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~- 89 (134)
.++.|| + .+. .|+.||+.+.+-...+.. +. .|+.+.+.|...-++++.. .++....++.+..+..
T Consensus 94 dg~~l~-~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~---~~~~~~~spdg~~l~~~~~----~~~~~i~~~~~~~~g~~ 164 (331)
T 3u4y_A 94 DDQFAV-TVTGLNHPFNMQSYSFLKNKFISTIPI-PY---DAVGIAISPNGNGLILIDR----SSANTVRRFKIDADGVL 164 (331)
T ss_dssp TSSEEE-ECCCSSSSCEEEEEETTTTEEEEEEEC-CT---TEEEEEECTTSSCEEEEEE----TTTTEEEEEEECTTCCE
T ss_pred CCCEEE-EecCCCCcccEEEEECCCCCeEEEEEC-CC---CccceEECCCCCEEEEEec----CCCceEEEEEECCCCcE
Confidence 355666 6 555 899999987554333322 22 4689999999887777654 2343255555443211
Q ss_pred ccccccCCccccceeEEEEeCC-e-EEEEec-CCEEEEEeCC
Q psy74 90 ERKEVADGKRSTGISAVWVARN-R-FAVLDR-NHTILIKNLK 128 (134)
Q Consensus 90 ~~~~~~~~~~g~g~~AvFVaRN-R-fAvldk-~~~i~Iknl~ 128 (134)
..........+.+..++-++.+ + +++.+. +++|.|-+++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~ 206 (331)
T 3u4y_A 165 FDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQ 206 (331)
T ss_dssp EEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred eecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECC
Confidence 0000000111223334444433 3 556665 7788888885
No 49
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=84.03 E-value=11 Score=28.08 Aligned_cols=100 Identities=10% Similarity=0.194 Sum_probs=58.9
Q ss_pred EEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCC--eEEEEeccCCCCCCceEEEEEccCCCccccccc
Q psy74 19 VMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEH--SILVTTRNANNFENSTYDLYMIPKEESERKEVA 95 (134)
Q Consensus 19 ~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~--~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~~ 95 (134)
.|.-. .++.|+.||+.+......+...+ +...+.+.|... ..|++.. .+|...++.+..... ...-
T Consensus 114 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-----~~~~v~~~d~~~~~~--~~~~ 182 (408)
T 4a11_B 114 MFTSSSFDKTLKVWDTNTLQTADVFNFEE----TVYSHHMSPVSTKHCLVAVGT-----RGPKVQLCDLKSGSC--SHIL 182 (408)
T ss_dssp CEEEEETTSEEEEEETTTTEEEEEEECSS----CEEEEEECSSCSSCCEEEEEE-----SSSSEEEEESSSSCC--CEEE
T ss_pred EEEEEeCCCeEEEeeCCCCccceeccCCC----ceeeeEeecCCCCCcEEEEEc-----CCCeEEEEeCCCcce--eeee
Confidence 34444 78999999999865554444332 456777777543 3444433 445667776543311 1111
Q ss_pred CCccccceeEEEEeCCe--EEEEecCCEEEEEeCCC
Q psy74 96 DGKRSTGISAVWVARNR--FAVLDRNHTILIKNLKN 129 (134)
Q Consensus 96 ~~~~g~g~~AvFVaRNR--fAvldk~~~i~Iknl~n 129 (134)
....+...+..|-...+ ||+-..+++|.|.|+..
T Consensus 183 ~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~ 218 (408)
T 4a11_B 183 QGHRQEILAVSWSPRYDYILATASADSRVKLWDVRR 218 (408)
T ss_dssp CCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTC
T ss_pred cCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCC
Confidence 23344445556655544 77777789999999853
No 50
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=83.96 E-value=13 Score=28.59 Aligned_cols=101 Identities=11% Similarity=0.100 Sum_probs=56.5
Q ss_pred EEEEE--eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCcccccccC
Q psy74 19 VMYYV--KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVAD 96 (134)
Q Consensus 19 ~L~Yv--kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~~~ 96 (134)
.+++. .|+.|+.||+.+..- +..+.+ .-.+..++.++|....++..+ +.|+..++.+.....-..-..+
T Consensus 211 ~~l~sgs~Dg~v~~wd~~~~~~--~~~~~~-h~~~v~~v~~~p~~~~l~s~s------~D~~v~lwd~~~~~~~~~~~~~ 281 (354)
T 2pbi_B 211 NTFVSGGCDKKAMVWDMRSGQC--VQAFET-HESDVNSVRYYPSGDAFASGS------DDATCRLYDLRADREVAIYSKE 281 (354)
T ss_dssp CEEEEEETTSCEEEEETTTCCE--EEEECC-CSSCEEEEEECTTSSEEEEEE------TTSCEEEEETTTTEEEEEECCT
T ss_pred CEEEEEeCCCeEEEEECCCCcE--EEEecC-CCCCeEEEEEeCCCCEEEEEe------CCCeEEEEECCCCcEEEEEcCC
Confidence 34443 899999999988542 333443 223678999999887665553 3456777765543110000011
Q ss_pred CccccceeEEEEeCCeEEEE-ecCCEEEEEeCC
Q psy74 97 GKRSTGISAVWVARNRFAVL-DRNHTILIKNLK 128 (134)
Q Consensus 97 ~~~g~g~~AvFVaRNRfAvl-dk~~~i~Iknl~ 128 (134)
.......+..|-...++++. ..+++|.|-|+.
T Consensus 282 ~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~ 314 (354)
T 2pbi_B 282 SIIFGASSVDFSLSGRLLFAGYNDYTINVWDVL 314 (354)
T ss_dssp TCCSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CcccceeEEEEeCCCCEEEEEECCCcEEEEECC
Confidence 11112334445444444444 347788888874
No 51
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=83.73 E-value=13 Score=28.51 Aligned_cols=105 Identities=14% Similarity=0.126 Sum_probs=59.3
Q ss_pred eCCEEEEE--eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCC---------CCCceEEEEEc
Q psy74 16 HNNVMYYV--KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANN---------FENSTYDLYMI 84 (134)
Q Consensus 16 ~~n~L~Yv--kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~---------~d~g~yeL~~l 84 (134)
.++.||.. .+..|+.||+.+.+-...+.. + ..+..+.+.|....+++....... .+.|...++.+
T Consensus 313 ~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-~---~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~ 388 (433)
T 3bws_A 313 TENKIYVSDMCCSKIEVYDLKEKKVQKSIPV-F---DKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDT 388 (433)
T ss_dssp STTEEEEEETTTTEEEEEETTTTEEEEEEEC-S---SSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEET
T ss_pred CCCEEEEEecCCCEEEEEECCCCcEEEEecC-C---CCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEEC
Confidence 45678776 788999999997554333322 1 257899999998877776541000 01245555543
Q ss_pred cCCCc-ccccccCCccccceeEEEEeC-C-eEEEEec-CCEEEEEeCCC
Q psy74 85 PKEES-ERKEVADGKRSTGISAVWVAR-N-RFAVLDR-NHTILIKNLKN 129 (134)
Q Consensus 85 pk~~~-~~~~~~~~~~g~g~~AvFVaR-N-RfAvldk-~~~i~Iknl~n 129 (134)
..... ... +. +....++-++. . .+++-.. +++|.|-++++
T Consensus 389 ~~~~~~~~~---~~--~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 389 TTDTVKEFW---EA--GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp TTTEEEEEE---EC--SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred CCCcEEEEe---cC--CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 32211 111 11 22233444443 3 4556665 88999998864
No 52
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=83.69 E-value=10 Score=27.25 Aligned_cols=100 Identities=11% Similarity=0.119 Sum_probs=63.4
Q ss_pred CCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCccccccc
Q psy74 17 NNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVA 95 (134)
Q Consensus 17 ~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~~ 95 (134)
++.|+-. .+..|+.||. ..++..+++....+...+.+.|... ++.. . .+|...++.+..... ...-
T Consensus 155 ~~~l~~~~~d~~i~i~d~----~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~-~-----~dg~i~i~d~~~~~~--~~~~ 221 (313)
T 3odt_A 155 ENKFLTASADKTIKLWQN----DKVIKTFSGIHNDVVRHLAVVDDGH-FISC-S-----NDGLIKLVDMHTGDV--LRTY 221 (313)
T ss_dssp TTEEEEEETTSCEEEEET----TEEEEEECSSCSSCEEEEEEEETTE-EEEE-E-----TTSEEEEEETTTCCE--EEEE
T ss_pred CCEEEEEECCCCEEEEec----CceEEEEeccCcccEEEEEEcCCCe-EEEc-c-----CCCeEEEEECCchhh--hhhh
Confidence 4555555 8899999993 3444555554555788999999887 3333 3 445677776553311 0011
Q ss_pred CCccccceeEEEEeCCeEEEEecCCEEEEEeCCC
Q psy74 96 DGKRSTGISAVWVARNRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 96 ~~~~g~g~~AvFVaRNRfAvldk~~~i~Iknl~n 129 (134)
....+...+..|-..+++++-..+++|.|-|+++
T Consensus 222 ~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~ 255 (313)
T 3odt_A 222 EGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKEN 255 (313)
T ss_dssp ECCSSCEEEEEECTTSCEEEEETTSEEEEECTTT
T ss_pred hcCCceEEEEEEecCCCEEEEecCCEEEEEECCC
Confidence 2334445556676666888888899999999854
No 53
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=83.61 E-value=14 Score=28.79 Aligned_cols=102 Identities=13% Similarity=0.137 Sum_probs=64.9
Q ss_pred eCCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCcccccc
Q psy74 16 HNNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEV 94 (134)
Q Consensus 16 ~~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~ 94 (134)
+++.|+-. .++.|+.||+.+.+ ++..+.| ...+...+.++|....++..+ .+|...++.+..... ...
T Consensus 279 ~~~~l~~~~~d~~i~vwd~~~~~--~~~~~~~-~~~~v~~~~~~~~~~~l~sg~------~dg~i~vwd~~~~~~--~~~ 347 (464)
T 3v7d_B 279 HGNIVVSGSYDNTLIVWDVAQMK--CLYILSG-HTDRIYSTIYDHERKRCISAS------MDTTIRIWDLENGEL--MYT 347 (464)
T ss_dssp ETTEEEEEETTSCEEEEETTTTE--EEEEECC-CSSCEEEEEEETTTTEEEEEE------TTSCEEEEETTTTEE--EEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCc--EEEEecC-CCCCEEEEEEcCCCCEEEEEe------CCCcEEEEECCCCcE--EEE
Confidence 45556665 89999999998643 3444443 334678999999877666553 335666665543211 001
Q ss_pred cCCccccceeEEEEeCCeEEEEecCCEEEEEeCCC
Q psy74 95 ADGKRSTGISAVWVARNRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 95 ~~~~~g~g~~AvFVaRNRfAvldk~~~i~Iknl~n 129 (134)
-....+ ...++.+..+.++.-..+++|.|-|+..
T Consensus 348 ~~~h~~-~v~~~~~~~~~l~s~s~dg~v~vwd~~~ 381 (464)
T 3v7d_B 348 LQGHTA-LVGLLRLSDKFLVSAAADGSIRGWDAND 381 (464)
T ss_dssp ECCCSS-CEEEEEECSSEEEEEETTSEEEEEETTT
T ss_pred EeCCCC-cEEEEEEcCCEEEEEeCCCcEEEEECCC
Confidence 112222 4556666778888888889999999864
No 54
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=83.41 E-value=9.9 Score=29.66 Aligned_cols=99 Identities=16% Similarity=0.155 Sum_probs=61.8
Q ss_pred eCCeEEEEECCCCCceeeEEee--cCCCCCceEEEeccC-------CCeEEEEeccCCCCCCceEEEEEccCCCcccccc
Q psy74 24 KERFLHRLDLTNSKDSVVMQLR--GGGRIPAHSISYNAT-------EHSILVTTRNANNFENSTYDLYMIPKEESERKEV 94 (134)
Q Consensus 24 kek~l~~~D~~t~~~~~~~slr--g~~~~~~~slsyNpa-------e~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~ 94 (134)
.|+.||.||..+........+. ...--...++.++|. +.-+|++.. +.++--|-.+..... ...
T Consensus 109 ~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s-----~D~tv~~Wd~~~~~~--~~~ 181 (393)
T 4gq1_A 109 QDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVG-----DDCTLIIWRLTDEGP--ILA 181 (393)
T ss_dssp TTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEE-----TTSEEEEEEEETTEE--EEE
T ss_pred CCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEE-----CCCeEEEEECCCCce--eee
Confidence 6899999999886554444443 224446789999873 445666544 444666665543311 001
Q ss_pred cCCccccceeEEEEe--CCeEEEEecCCEEEEEeCCC
Q psy74 95 ADGKRSTGISAVWVA--RNRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 95 ~~~~~g~g~~AvFVa--RNRfAvldk~~~i~Iknl~n 129 (134)
.....+...+..|-- .+++|+-..+++|.|-|+..
T Consensus 182 ~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t 218 (393)
T 4gq1_A 182 GYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTL 218 (393)
T ss_dssp EEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTC
T ss_pred ecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCC
Confidence 123344567788863 45788888899999999853
No 55
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=83.05 E-value=12 Score=27.48 Aligned_cols=101 Identities=6% Similarity=0.099 Sum_probs=60.5
Q ss_pred EEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCcccccccCC
Q psy74 19 VMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVADG 97 (134)
Q Consensus 19 ~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~~~~ 97 (134)
.|+-. .++.|+.||+.+........+++ ...+...|.++|....++..+ .+|...++.+..... .....
T Consensus 56 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~------~dg~v~iwd~~~~~~---~~~~~ 125 (368)
T 3mmy_A 56 FLIAGSWANDVRCWEVQDSGQTIPKAQQM-HTGPVLDVCWSDDGSKVFTAS------CDKTAKMWDLSSNQA---IQIAQ 125 (368)
T ss_dssp EEEEEETTSEEEEEEECTTSCEEEEEEEE-CSSCEEEEEECTTSSEEEEEE------TTSEEEEEETTTTEE---EEEEE
T ss_pred EEEEECCCCcEEEEEcCCCCceeEEEecc-ccCCEEEEEECcCCCEEEEEc------CCCcEEEEEcCCCCc---eeecc
Confidence 34444 78999999999844444344543 233688999999776666543 345666665543321 11112
Q ss_pred ccccceeEEEE-e-C-CeEEEEecCCEEEEEeCCC
Q psy74 98 KRSTGISAVWV-A-R-NRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 98 ~~g~g~~AvFV-a-R-NRfAvldk~~~i~Iknl~n 129 (134)
..+...+..|. . . +.|++-..+++|.|-|+..
T Consensus 126 ~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 160 (368)
T 3mmy_A 126 HDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRS 160 (368)
T ss_dssp CSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSC
T ss_pred ccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCC
Confidence 33445556662 3 3 2366666688999999853
No 56
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=83.03 E-value=12 Score=27.76 Aligned_cols=103 Identities=13% Similarity=0.130 Sum_probs=63.9
Q ss_pred eCCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCcccccc
Q psy74 16 HNNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEV 94 (134)
Q Consensus 16 ~~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~ 94 (134)
.++.|+-. .|+.|+.||+.+.+ .+..++| .-...++|.++|....++..+ +.|+-.+..+.....- ...
T Consensus 66 ~~~~l~s~s~d~~i~vwd~~~~~--~~~~~~~-h~~~v~~~~~~~~~~~l~sgs------~D~~v~lWd~~~~~~~-~~~ 135 (304)
T 2ynn_A 66 RKNWIIVGSDDFRIRVFNYNTGE--KVVDFEA-HPDYIRSIAVHPTKPYVLSGS------DDLTVKLWNWENNWAL-EQT 135 (304)
T ss_dssp GGTEEEEEETTSEEEEEETTTCC--EEEEEEC-CSSCEEEEEECSSSSEEEEEE------TTSCEEEEEGGGTTEE-EEE
T ss_pred CCCEEEEECCCCEEEEEECCCCc--EEEEEeC-CCCcEEEEEEcCCCCEEEEEC------CCCeEEEEECCCCcch-hhh
Confidence 34445544 88999999998854 3444553 223678999999887655442 3456777765433110 001
Q ss_pred cCCccccceeEEEEe--CCeEEEEecCCEEEEEeCC
Q psy74 95 ADGKRSTGISAVWVA--RNRFAVLDRNHTILIKNLK 128 (134)
Q Consensus 95 ~~~~~g~g~~AvFVa--RNRfAvldk~~~i~Iknl~ 128 (134)
-....+...+..|-. .+.||.=..+++|.|-|+.
T Consensus 136 ~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~ 171 (304)
T 2ynn_A 136 FEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLG 171 (304)
T ss_dssp ECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETT
T ss_pred hcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECC
Confidence 123444455566653 4578887778899999885
No 57
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=82.83 E-value=15 Score=28.75 Aligned_cols=102 Identities=14% Similarity=0.006 Sum_probs=58.3
Q ss_pred CEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCcccccccC
Q psy74 18 NVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVAD 96 (134)
Q Consensus 18 n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~~~ 96 (134)
+.|+=. .|+.|+.||+.+..-..+..- ........++.++|....++.. ...|...++.+...... .-.
T Consensus 178 ~~l~s~s~D~~v~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~g------~~dg~i~~wd~~~~~~~---~~~ 247 (435)
T 4e54_B 178 NQFYASSMEGTTRLQDFKGNILRVFASS-DTINIWFCSLDVSASSRMVVTG------DNVGNVILLNMDGKELW---NLR 247 (435)
T ss_dssp TEEEEECSSSCEEEEETTSCEEEEEECC-SSCSCCCCCEEEETTTTEEEEE------CSSSBEEEEESSSCBCC---CSB
T ss_pred CEEEEEeCCCEEEEeeccCCceeEEecc-CCCCccEEEEEECCCCCEEEEE------eCCCcEeeeccCcceeE---EEe
Confidence 444444 899999999986432221111 2233346788999988766654 24456667665422111 122
Q ss_pred CccccceeEEEE--eCCeEEEEecCCEEEEEeCCC
Q psy74 97 GKRSTGISAVWV--ARNRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 97 ~~~g~g~~AvFV--aRNRfAvldk~~~i~Iknl~n 129 (134)
...+...+..|- +++-||.-..+++|.|-|+..
T Consensus 248 ~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~ 282 (435)
T 4e54_B 248 MHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQ 282 (435)
T ss_dssp CCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTT
T ss_pred cccceEEeeeecCCCceEEEEecCcceeeEEeccc
Confidence 334445555664 334566656688899988854
No 58
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=82.70 E-value=14 Score=28.12 Aligned_cols=60 Identities=13% Similarity=0.193 Sum_probs=37.9
Q ss_pred CCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEcc
Q psy74 17 NNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIP 85 (134)
Q Consensus 17 ~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lp 85 (134)
++.|+-. .++.|+.||+.+.+.. ..+++ ...+...|.++|....++..+. .|...++.+.
T Consensus 151 ~~~l~s~s~d~~i~iwd~~~~~~~--~~~~~-h~~~v~~~~~~~~~~~l~s~~~------d~~v~iwd~~ 211 (420)
T 3vl1_A 151 GEALISSSQDMQLKIWSVKDGSNP--RTLIG-HRATVTDIAIIDRGRNVLSASL------DGTIRLWECG 211 (420)
T ss_dssp SSEEEEEETTSEEEEEETTTCCCC--EEEEC-CSSCEEEEEEETTTTEEEEEET------TSCEEEEETT
T ss_pred CCEEEEEeCCCeEEEEeCCCCcCc--eEEcC-CCCcEEEEEEcCCCCEEEEEcC------CCcEEEeECC
Confidence 4445554 8899999999875433 34443 2336789999998776665432 3455555544
No 59
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=82.25 E-value=13 Score=27.51 Aligned_cols=105 Identities=10% Similarity=0.124 Sum_probs=57.7
Q ss_pred CEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCC-CeEEEEeccCCCCCCceEEEEEccCCCccccccc
Q psy74 18 NVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATE-HSILVTTRNANNFENSTYDLYMIPKEESERKEVA 95 (134)
Q Consensus 18 n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae-~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~~ 95 (134)
+.|.=. .|+.|+.||+.+..-..+..+.+ .-.+.+++.++|.+ ...|++.. ..|...++.+..........-
T Consensus 68 ~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~g~~l~s~s-----~d~~v~~wd~~~~~~~~~~~~ 141 (297)
T 2pm7_B 68 TILASCSYDGKVMIWKEENGRWSQIAVHAV-HSASVNSVQWAPHEYGPMLLVAS-----SDGKVSVVEFKENGTTSPIII 141 (297)
T ss_dssp SEEEEEETTTEEEEEEBSSSCBCCCEEECC-CSSCEEEEEECCGGGCSEEEEEE-----TTSEEEEEEBCSSSCBCCEEE
T ss_pred CEEEEEcCCCEEEEEEcCCCceEEEEEeec-CCCceeEEEeCcCCCCcEEEEEE-----CCCcEEEEEecCCCceeeeee
Confidence 334444 79999999998765444555543 22367899999974 33444333 345677776654311100011
Q ss_pred CCccccceeEEEEe--------------CCeEEEEecCCEEEEEeCC
Q psy74 96 DGKRSTGISAVWVA--------------RNRFAVLDRNHTILIKNLK 128 (134)
Q Consensus 96 ~~~~g~g~~AvFVa--------------RNRfAvldk~~~i~Iknl~ 128 (134)
+...+...+..|-. .+.+|.=..+++|.|-|++
T Consensus 142 ~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~ 188 (297)
T 2pm7_B 142 DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN 188 (297)
T ss_dssp ECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEE
T ss_pred ecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEc
Confidence 12222233344432 2356666667788888774
No 60
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=82.17 E-value=8.5 Score=33.29 Aligned_cols=106 Identities=24% Similarity=0.278 Sum_probs=65.2
Q ss_pred CCEEEEEeCCeEEEEECCCCCcee-eEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCccccc--
Q psy74 17 NNVMYYVKERFLHRLDLTNSKDSV-VMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKE-- 93 (134)
Q Consensus 17 ~n~L~Yvkek~l~~~D~~t~~~~~-~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~-- 93 (134)
+..|+|.....|+..++.+..... ++++. ....|..|.|++.+..|.++.. .++ .++.+..+.++...
T Consensus 317 ~~~Ll~~~~~~i~~i~l~~~~~~~~~~~~~--~l~~~~~ld~d~~~~~ly~sD~-----~~~--~I~r~~~~g~~~~~v~ 387 (619)
T 3s94_A 317 TELLLLARRTDLRRISLDTPDFTDIVLQLE--DIRHAIAIDYDPVEGYIYWTDD-----EVR--AIRRSFIDGSGSQFVV 387 (619)
T ss_dssp SEEEEEEESSCEEEEESSSTTCCCEECCCS--CCSSEEEEEEETTTTEEEEEET-----TTT--EEEEEETTSCSCEEEE
T ss_pred ceEEEEEcccceEEEecCCCccceeEEecc--ccCccEEEEEEcCCCeEEEEeC-----CCC--eEEEEEcCCCccEEEE
Confidence 346888888999999998744322 23333 2345789999999998888743 222 34433333221100
Q ss_pred ccCCccccceeEEEEeCCeEEEEec-CCEEEEEeCCCceE
Q psy74 94 VADGKRSTGISAVWVARNRFAVLDR-NHTILIKNLKNEFC 132 (134)
Q Consensus 94 ~~~~~~g~g~~AvFVaRNRfAvldk-~~~i~Iknl~n~~~ 132 (134)
..+...-.|++.=|++||=|.. |. +++|++-+++++..
T Consensus 388 ~~~~~~p~GlAvD~~~~~lY~t-D~~~~~I~v~~~~G~~~ 426 (619)
T 3s94_A 388 TAQIAHPDGIAVDWVARNLYWT-DTGTDRIEVTRLNGTMR 426 (619)
T ss_dssp CSSCSCCCEEEEETTTTEEEEE-ETTTTEEEEEETTSCSC
T ss_pred ECCCCCcCceEEecccCcEEEE-eCCCCcEEEEeCCCCeE
Confidence 1111223477766777776655 65 88999999987643
No 61
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=81.57 E-value=12 Score=26.77 Aligned_cols=106 Identities=15% Similarity=0.165 Sum_probs=58.2
Q ss_pred CCEEEEE-eCCeEEEEECCCCCceeeEEee----------cCCCCCceEEEeccC---CCeEEEEeccCCCCCCceEEEE
Q psy74 17 NNVMYYV-KERFLHRLDLTNSKDSVVMQLR----------GGGRIPAHSISYNAT---EHSILVTTRNANNFENSTYDLY 82 (134)
Q Consensus 17 ~n~L~Yv-kek~l~~~D~~t~~~~~~~slr----------g~~~~~~~slsyNpa---e~~vLv~~~~~~~~d~g~yeL~ 82 (134)
++.|+-. .++.|+.||+.+......+.+. .........+.++|. ...+++.+. |+ .. ++
T Consensus 124 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~-----~~-~~-~~ 196 (351)
T 3f3f_A 124 GLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSAL-----EQ-AI-IY 196 (351)
T ss_dssp CSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEET-----TE-EE-EE
T ss_pred CcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecC-----CC-cE-EE
Confidence 4455555 8899999999885533222221 123446788999987 444444432 33 23 33
Q ss_pred EccCCCc-ccccccCCccccceeEEEEeC-----CeEEEEecCCEEEEEeCCC
Q psy74 83 MIPKEES-ERKEVADGKRSTGISAVWVAR-----NRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 83 ~lpk~~~-~~~~~~~~~~g~g~~AvFVaR-----NRfAvldk~~~i~Iknl~n 129 (134)
....... .....-....+...+..|-.- +.+|.-..+++|.|-|+..
T Consensus 197 ~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 197 QRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITE 249 (351)
T ss_dssp EECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEE
T ss_pred EccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCC
Confidence 2222221 001112234444445555544 3567766789999999864
No 62
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=81.43 E-value=17 Score=28.17 Aligned_cols=104 Identities=6% Similarity=0.051 Sum_probs=62.3
Q ss_pred CCEEEEE-eCCeEEEEECCCCCceeeEEee-cCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCcccccc
Q psy74 17 NNVMYYV-KERFLHRLDLTNSKDSVVMQLR-GGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEV 94 (134)
Q Consensus 17 ~n~L~Yv-kek~l~~~D~~t~~~~~~~slr-g~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~ 94 (134)
++.|.-. .++.|+.||+.+++........ ...-.+.++|.++|...-++..+ ..|+..+..+..... ...
T Consensus 93 d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs------~d~~i~iwd~~~~~~--~~~ 164 (344)
T 4gqb_B 93 ERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGS------KDICIKVWDLAQQVV--LSS 164 (344)
T ss_dssp TTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEE------TTSCEEEEETTTTEE--EEE
T ss_pred CCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEe------CCCeEEEEECCCCcE--EEE
Confidence 3445544 8899999999986655444433 12334689999999877655542 334666665543211 001
Q ss_pred cCCccccceeEEEEeC--CeEEEEecCCEEEEEeCC
Q psy74 95 ADGKRSTGISAVWVAR--NRFAVLDRNHTILIKNLK 128 (134)
Q Consensus 95 ~~~~~g~g~~AvFVaR--NRfAvldk~~~i~Iknl~ 128 (134)
-.++.+...+..|-.. +.||.-..+++|.|-|+.
T Consensus 165 ~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~ 200 (344)
T 4gqb_B 165 YRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTR 200 (344)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred EcCcCCceEEEEecCCCCCceeeecccccccccccc
Confidence 1234444455556433 356666668889999885
No 63
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=81.31 E-value=7.7 Score=29.19 Aligned_cols=105 Identities=13% Similarity=0.065 Sum_probs=54.9
Q ss_pred CCEEEEE-eCCeEEEEECCCCC-ceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCc-cccc
Q psy74 17 NNVMYYV-KERFLHRLDLTNSK-DSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEES-ERKE 93 (134)
Q Consensus 17 ~n~L~Yv-kek~l~~~D~~t~~-~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~-~~~~ 93 (134)
++.|.-. .++.|+.||+.+.. -.+...+.+ .-.+...+.++|....++..+. | |...++.+..... ....
T Consensus 67 ~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~-----d-~~i~iwd~~~~~~~~~~~ 139 (377)
T 3dwl_C 67 SNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLR-LNRAATFVRWSPNEDKFAVGSG-----A-RVISVCYFEQENDWWVSK 139 (377)
T ss_dssp TCCEEEEETTSSEEEC------CCCCEEECCC-CSSCEEEEECCTTSSCCEEEES-----S-SCEEECCC-----CCCCE
T ss_pred CCEEEEEeCCCeEEEEEcCCCCceeeeeEecc-cCCceEEEEECCCCCEEEEEec-----C-CeEEEEEECCcccceeee
Confidence 4455555 78999999999855 334455543 2336789999997776665533 3 3455544332211 0011
Q ss_pred ccCC-ccccceeEEEEeCC-eEEEEecCCEEEEEeCC
Q psy74 94 VADG-KRSTGISAVWVARN-RFAVLDRNHTILIKNLK 128 (134)
Q Consensus 94 ~~~~-~~g~g~~AvFVaRN-RfAvldk~~~i~Iknl~ 128 (134)
.-.. ..+...+..|-.-. .+|+-..+++|.|-|+.
T Consensus 140 ~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 176 (377)
T 3dwl_C 140 HLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAY 176 (377)
T ss_dssp EECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEEC
T ss_pred EeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEE
Confidence 1112 44444555555443 46666668899999984
No 64
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=81.26 E-value=16 Score=27.71 Aligned_cols=103 Identities=10% Similarity=0.274 Sum_probs=59.9
Q ss_pred eCCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCcccccc
Q psy74 16 HNNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEV 94 (134)
Q Consensus 16 ~~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~ 94 (134)
.++.|.-. .+..|+.||+.+.+ .+..++| .-.+.++|.++|....++.. .+.|...++.+..... ...
T Consensus 175 dg~~lasg~~dg~i~iwd~~~~~--~~~~~~~-h~~~v~~l~~spd~~~l~s~------s~dg~i~iwd~~~~~~--~~~ 243 (321)
T 3ow8_A 175 DGKYLASGAIDGIINIFDIATGK--LLHTLEG-HAMPIRSLTFSPDSQLLVTA------SDDGYIKIYDVQHANL--AGT 243 (321)
T ss_dssp TSSEEEEEETTSCEEEEETTTTE--EEEEECC-CSSCCCEEEECTTSCEEEEE------CTTSCEEEEETTTCCE--EEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCc--EEEEEcc-cCCceeEEEEcCCCCEEEEE------cCCCeEEEEECCCcce--eEE
Confidence 34455555 88999999998753 3444553 23367899999977654443 2445677776543211 001
Q ss_pred cCCccccceeEEEEeCC-eEEEEecCCEEEEEeCCC
Q psy74 95 ADGKRSTGISAVWVARN-RFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 95 ~~~~~g~g~~AvFVaRN-RfAvldk~~~i~Iknl~n 129 (134)
-....+...+..|-.-. .+|.-..+++|.|-|+..
T Consensus 244 ~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~ 279 (321)
T 3ow8_A 244 LSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 279 (321)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC
Confidence 12333334445554433 455555588899988864
No 65
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=80.93 E-value=27 Score=30.23 Aligned_cols=108 Identities=8% Similarity=0.170 Sum_probs=64.9
Q ss_pred CCEEEEEeCCeEEEEECCCCCc-eeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCccccc-c
Q psy74 17 NNVMYYVKERFLHRLDLTNSKD-SVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKE-V 94 (134)
Q Consensus 17 ~n~L~Yvkek~l~~~D~~t~~~-~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~-~ 94 (134)
...|+|.....|+.+.+..... ..++++. ....+..|.|++.+..|.++.. .++.. +.+..+.+.... .
T Consensus 308 ~~~Ll~s~~~~i~~i~l~~~~~~~~~l~~~--~~~~~~~ld~d~~~~~iy~sD~-----~~~~I--~r~~~~g~~~~~v~ 378 (628)
T 4a0p_A 308 TTFLLFSQKSAINRMVIDEQQSPDIILPIH--SLRNVRAIDYDPLDKQLYWIDS-----RQNMI--RKAQEDGSQGFTVV 378 (628)
T ss_dssp SSEEEEEETTEEEEECCCTTCCCCEECCCT--TCSCEEEEEEETTTTEEEEEET-----TTTEE--EEEETTSCSCEEEE
T ss_pred cceeeeeccceEEEEecccccCceEEEEeh--hcCCceEEEEecCCCeEEEEec-----CcceE--EEEEcCCCCceEEE
Confidence 5679999999999998875322 1222232 2335788999999998877643 22222 222112111000 0
Q ss_pred c-------CCccccceeEEEEeCCeEEEEecCCEEEEEeCCCceEe
Q psy74 95 A-------DGKRSTGISAVWVARNRFAVLDRNHTILIKNLKNEFCT 133 (134)
Q Consensus 95 ~-------~~~~g~g~~AvFVaRNRfAvldk~~~i~Iknl~n~~~K 133 (134)
. ...+-.|++.=|++||=|.+=..++.|++-+++++..+
T Consensus 379 ~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~G~~~~ 424 (628)
T 4a0p_A 379 VSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSVG 424 (628)
T ss_dssp C--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCEEE
T ss_pred EcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECCCCeEE
Confidence 0 11123588888899987776334889999999887654
No 66
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=80.81 E-value=18 Score=28.06 Aligned_cols=104 Identities=13% Similarity=0.179 Sum_probs=57.1
Q ss_pred CCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCc-ccc--
Q psy74 17 NNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEES-ERK-- 92 (134)
Q Consensus 17 ~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~-~~~-- 92 (134)
++.|+-. .|+.++.||+.+......+...+ ....+.+.|.+...|++.. ..|...++.+..... ...
T Consensus 177 ~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~----~v~~~~~~~~~~~~l~~~s-----~d~~v~iwd~~~~~~~~~~~~ 247 (393)
T 1erj_A 177 GDKLVSGSGDRTVRIWDLRTGQCSLTLSIED----GVTTVAVSPGDGKYIAAGS-----LDRAVRVWDSETGFLVERLDS 247 (393)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECSS----CEEEEEECSTTCCEEEEEE-----TTSCEEEEETTTCCEEEEEC-
T ss_pred CCEEEEecCCCcEEEEECCCCeeEEEEEcCC----CcEEEEEECCCCCEEEEEc-----CCCcEEEEECCCCcEEEeecc
Confidence 4455555 89999999998754333332222 4678899997666666544 334556655432211 000
Q ss_pred --cccCCccccceeEEEEeCCe-EEEEecCCEEEEEeCCC
Q psy74 93 --EVADGKRSTGISAVWVARNR-FAVLDRNHTILIKNLKN 129 (134)
Q Consensus 93 --~~~~~~~g~g~~AvFVaRNR-fAvldk~~~i~Iknl~n 129 (134)
.......+.-.+..|-.-.+ +|.-..+++|.|-|+.+
T Consensus 248 ~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~ 287 (393)
T 1erj_A 248 ENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQN 287 (393)
T ss_dssp -----CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred cccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCC
Confidence 00123333344555554444 55555588999998864
No 67
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=80.66 E-value=18 Score=28.17 Aligned_cols=102 Identities=12% Similarity=0.143 Sum_probs=58.6
Q ss_pred eCCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCccc-cc
Q psy74 16 HNNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESER-KE 93 (134)
Q Consensus 16 ~~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~-~~ 93 (134)
+++.|+-. .+..|+.||+.+.+. +..+++ ...+...+.+++. .|++.. ..|...++.+....... ..
T Consensus 182 ~~~~l~sg~~dg~i~vwd~~~~~~--~~~~~~-h~~~v~~l~~~~~---~l~s~s-----~dg~i~vwd~~~~~~~~~~~ 250 (435)
T 1p22_A 182 DERVIITGSSDSTVRVWDVNTGEM--LNTLIH-HCEAVLHLRFNNG---MMVTCS-----KDRSIAVWDMASPTDITLRR 250 (435)
T ss_dssp CSSEEEEEETTSCEEEEESSSCCE--EEEECC-CCSCEEEEECCTT---EEEEEE-----TTSCEEEEECSSSSCCEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCcE--EEEEcC-CCCcEEEEEEcCC---EEEEee-----CCCcEEEEeCCCCCCceeee
Confidence 34444444 788899999987543 333442 2335678888753 344333 34566666655432210 01
Q ss_pred ccCCccccceeEEEEeCCeEEEEecCCEEEEEeCCC
Q psy74 94 VADGKRSTGISAVWVARNRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 94 ~~~~~~g~g~~AvFVaRNRfAvldk~~~i~Iknl~n 129 (134)
......+...+..| ..+.+|+-..+++|.|-|++.
T Consensus 251 ~~~~~~~~v~~~~~-~~~~l~s~~~dg~i~vwd~~~ 285 (435)
T 1p22_A 251 VLVGHRAAVNVVDF-DDKYIVSASGDRTIKVWNTST 285 (435)
T ss_dssp EECCCSSCEEEEEE-ETTEEEEEETTSEEEEEETTT
T ss_pred EecCCCCcEEEEEe-CCCEEEEEeCCCeEEEEECCc
Confidence 12233443444445 788888888888999999864
No 68
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=80.57 E-value=16 Score=27.47 Aligned_cols=66 Identities=5% Similarity=0.121 Sum_probs=43.0
Q ss_pred eCCEEEEEe--CCeEEEEECCCCCceeeEEee--cCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEcc
Q psy74 16 HNNVMYYVK--ERFLHRLDLTNSKDSVVMQLR--GGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIP 85 (134)
Q Consensus 16 ~~n~L~Yvk--ek~l~~~D~~t~~~~~~~slr--g~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lp 85 (134)
.+..||... +..|+.||+.+..-..+..+. ......++.+.+.|...-+.++.. .+.+...++.+.
T Consensus 221 dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~----~~~~~i~v~~~~ 290 (361)
T 3scy_A 221 DGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNR----LKADGVAIFKVD 290 (361)
T ss_dssp TSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEEC----SSSCEEEEEEEC
T ss_pred CCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECC----CCCCEEEEEEEc
Confidence 344566664 688999999865444444444 223345789999999887777644 215567777664
No 69
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=79.76 E-value=16 Score=26.83 Aligned_cols=101 Identities=11% Similarity=0.141 Sum_probs=56.3
Q ss_pred CCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCc-ccccc
Q psy74 17 NNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEES-ERKEV 94 (134)
Q Consensus 17 ~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~-~~~~~ 94 (134)
++.|+-. .++.|+.||+.+.+. +..+.+ .-.+...+.++|....++..+ ..|...++.+..... ...
T Consensus 119 ~~~l~s~~~d~~i~iwd~~~~~~--~~~~~~-~~~~v~~~~~~~~~~~l~~~~------~d~~i~~wd~~~~~~~~~~-- 187 (312)
T 4ery_A 119 SNLIVSGSFDESVRIWDVKTGKC--LKTLPA-HSDPVSAVHFNRDGSLIVSSS------YDGLCRIWDTASGQCLKTL-- 187 (312)
T ss_dssp SSEEEEEETTSCEEEEETTTCCE--EEEECC-CSSCEEEEEECTTSSEEEEEE------TTSCEEEEETTTCCEEEEE--
T ss_pred CCEEEEEeCCCcEEEEECCCCEE--EEEecC-CCCcEEEEEEcCCCCEEEEEe------CCCcEEEEECCCCceeeEE--
Confidence 3444444 889999999987543 333332 233678899999777555542 334666666543311 000
Q ss_pred cCCccccceeEEEEeC-C-eEEEEecCCEEEEEeCCC
Q psy74 95 ADGKRSTGISAVWVAR-N-RFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 95 ~~~~~g~g~~AvFVaR-N-RfAvldk~~~i~Iknl~n 129 (134)
.... ......+-++. . .+++-..+++|.|-|+..
T Consensus 188 ~~~~-~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 223 (312)
T 4ery_A 188 IDDD-NPPVSFVKFSPNGKYILAATLDNTLKLWDYSK 223 (312)
T ss_dssp CCSS-CCCEEEEEECTTSSEEEEEETTTEEEEEETTT
T ss_pred eccC-CCceEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 0111 12233333333 3 355555588899998854
No 70
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=79.65 E-value=17 Score=27.11 Aligned_cols=103 Identities=14% Similarity=0.175 Sum_probs=61.5
Q ss_pred EEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCc--------
Q psy74 19 VMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEES-------- 89 (134)
Q Consensus 19 ~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~-------- 89 (134)
.++.. .+..|+.||+.+... +..+++ ...+...+.++|....+|++.. ..|...++.+.....
T Consensus 158 ~~~~~~~~~~v~~~d~~~~~~--~~~~~~-~~~~v~~~~~~~~~~~ll~~~~-----~dg~i~i~d~~~~~~~~~~~~~~ 229 (408)
T 4a11_B 158 LVAVGTRGPKVQLCDLKSGSC--SHILQG-HRQEILAVSWSPRYDYILATAS-----ADSRVKLWDVRRASGCLITLDQH 229 (408)
T ss_dssp EEEEEESSSSEEEEESSSSCC--CEEECC-CCSCEEEEEECSSCTTEEEEEE-----TTSCEEEEETTCSSCCSEECCTT
T ss_pred EEEEEcCCCeEEEEeCCCcce--eeeecC-CCCcEEEEEECCCCCcEEEEEc-----CCCcEEEEECCCCCccccccccc
Confidence 34444 889999999987543 334442 2236789999999886665544 445666776543320
Q ss_pred -----cccc-ccCCccccceeEEEEeCC-eEEEEecCCEEEEEeCCC
Q psy74 90 -----ERKE-VADGKRSTGISAVWVARN-RFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 90 -----~~~~-~~~~~~g~g~~AvFVaRN-RfAvldk~~~i~Iknl~n 129 (134)
.... ......+...+..|-.-. .+|+-..+++|.|-|+.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 276 (408)
T 4a11_B 230 NGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSN 276 (408)
T ss_dssp TTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred ccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCC
Confidence 0000 012333444455555443 566666788999999964
No 71
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=79.46 E-value=20 Score=27.86 Aligned_cols=106 Identities=21% Similarity=0.242 Sum_probs=64.1
Q ss_pred cceeeCCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCcc
Q psy74 12 AYTVHNNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESE 90 (134)
Q Consensus 12 a~~~~~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~ 90 (134)
+...+++.|+-. .++.|+.||+.+.+ .+..++| .-.+...+.+.|.. .|++.. ..|+..+..+.....
T Consensus 127 ~~~~~~~~l~sgs~dg~i~vwd~~~~~--~~~~~~~-h~~~V~~l~~~~~~--~l~s~s-----~dg~i~vwd~~~~~~- 195 (464)
T 3v7d_B 127 CLQFEDNYVITGADDKMIRVYDSINKK--FLLQLSG-HDGGVWALKYAHGG--ILVSGS-----TDRTVRVWDIKKGCC- 195 (464)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTTE--EEEEECC-CSSCEEEEEECSTT--EEEEEE-----TTSCEEEEETTTTEE-
T ss_pred EEEECCCEEEEEcCCCcEEEEECCCCc--EEEEEeC-CCcCEEEEEEcCCC--EEEEEe-----CCCCEEEEECCCCcE-
Confidence 345567766665 89999999998754 4455553 33367899998876 455433 445666665543211
Q ss_pred cccccCCccccceeEEEEe---CCeEEEEecCCEEEEEeCCC
Q psy74 91 RKEVADGKRSTGISAVWVA---RNRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 91 ~~~~~~~~~g~g~~AvFVa---RNRfAvldk~~~i~Iknl~n 129 (134)
...-....+...+..|.. .+.+++-..+++|.|-++..
T Consensus 196 -~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~ 236 (464)
T 3v7d_B 196 -THVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPK 236 (464)
T ss_dssp -EEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCC
T ss_pred -EEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCC
Confidence 001123333344444542 25577777789999999864
No 72
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=79.45 E-value=24 Score=30.51 Aligned_cols=105 Identities=16% Similarity=0.279 Sum_probs=63.0
Q ss_pred CCEEEEEeCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCccccc--c
Q psy74 17 NNVMYYVKERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKE--V 94 (134)
Q Consensus 17 ~n~L~Yvkek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~--~ 94 (134)
+..|+|.....|+..|+.+.....++++.| ...|..|.|.|.+..|.++.. .++.. +.+..+.+.... .
T Consensus 6 ~~~Ll~s~~~~I~~i~l~~~~~~~~~~~~~--~~~~~~l~~d~~~~~lywtD~-----~~~~I--~r~~~~g~~~~~v~~ 76 (628)
T 4a0p_A 6 EAFLLFSRRADIRRISLETNNNNVAIPLTG--VKEASALDFDVTDNRIYWTDI-----SLKTI--SRAFMNGSALEHVVE 76 (628)
T ss_dssp CCEEEEEETTEEEEEESSCTTCEEECCCCS--CSCEEEEEEETTTTEEEEEET-----TTTEE--EEEETTSCSCEEEEC
T ss_pred CcEEEEEeCCcEEEEECCCCCcceEEEcCC--CCceEEEEEECCCCEEEEEEC-----CCCeE--EEEECCCCCcEEEEe
Confidence 457999999999999999855444444432 335789999999998877644 22322 222222110000 0
Q ss_pred cCCccccceeEEEEeCCeEEEEec-CCEEEEEeCCCce
Q psy74 95 ADGKRSTGISAVWVARNRFAVLDR-NHTILIKNLKNEF 131 (134)
Q Consensus 95 ~~~~~g~g~~AvFVaRNRfAvldk-~~~i~Iknl~n~~ 131 (134)
.....-.|++.=|+++|=|. -|. ++.|++-++++..
T Consensus 77 ~g~~~P~GlAvD~~~~~LY~-tD~~~~~I~v~~~dG~~ 113 (628)
T 4a0p_A 77 FGLDYPEGMAVDWLGKNLYW-ADTGTNRIEVSKLDGQH 113 (628)
T ss_dssp SSCSCCCEEEEETTTTEEEE-EETTTTEEEEEETTSTT
T ss_pred CCCCCcceEEEEeCCCEEEE-EECCCCEEEEEecCCCc
Confidence 11112246665566666444 466 7889998887654
No 73
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=79.40 E-value=17 Score=27.08 Aligned_cols=106 Identities=11% Similarity=0.185 Sum_probs=57.5
Q ss_pred CCEEEEEe----CCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCc-cc
Q psy74 17 NNVMYYVK----ERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEES-ER 91 (134)
Q Consensus 17 ~n~L~Yvk----ek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~-~~ 91 (134)
++.||.+- +..|+.||+.+..-..+..+.+ .-..|..|.+.|....+++... +++...++.+..+.. ..
T Consensus 50 dg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~-~~~~p~~~a~spdg~~l~~~~~-----~~~~v~v~~~~~~g~~~~ 123 (347)
T 3hfq_A 50 KDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVA-PGTPPAYVAVDEARQLVYSANY-----HKGTAEVMKIAADGALTL 123 (347)
T ss_dssp TCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEE-ESCCCSEEEEETTTTEEEEEET-----TTTEEEEEEECTTSCEEE
T ss_pred CCeEEEEEecCCCceEEEEEecCCcEEEeeeeec-CCCCCEEEEECCCCCEEEEEeC-----CCCEEEEEEeCCCCCeee
Confidence 34476663 3789999997654334444331 1225788999998887777643 445666666543211 00
Q ss_pred ccc--cC------Cccc-cceeEEEEeCCeEEEEec-CCEEEEEeCC
Q psy74 92 KEV--AD------GKRS-TGISAVWVARNRFAVLDR-NHTILIKNLK 128 (134)
Q Consensus 92 ~~~--~~------~~~g-~g~~AvFVaRNRfAvldk-~~~i~Iknl~ 128 (134)
... .. ...+ ...+.+|-.-.++++.+. +++|.+.+++
T Consensus 124 ~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 124 TDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp EEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred cceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEEC
Confidence 000 00 0011 122344443445666666 6778887776
No 74
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=78.81 E-value=9.3 Score=30.88 Aligned_cols=100 Identities=10% Similarity=0.081 Sum_probs=58.4
Q ss_pred eCCeEEEEECCCC-----Cc-eeeEEee--cCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCccccccc
Q psy74 24 KERFLHRLDLTNS-----KD-SVVMQLR--GGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVA 95 (134)
Q Consensus 24 kek~l~~~D~~t~-----~~-~~~~slr--g~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~~ 95 (134)
.++.|+.||+.+. .. .++..++ ...-.+++.|.++|....+|++.. ..|+.-+..+..... ....
T Consensus 116 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s-----~Dg~v~iwD~~~~~~--~~~~ 188 (434)
T 2oit_A 116 YGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL-----ADGSIAVLQVTETVK--VCAT 188 (434)
T ss_dssp TEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE-----TTSCEEEEEESSSEE--EEEE
T ss_pred CCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE-----CCCeEEEEEcCCCcc--eeec
Confidence 5899999999763 11 3444454 223447899999998655555433 334666665543311 0011
Q ss_pred CCccccceeEEEEeC-CeEEEEecCCEEEEEeCCCc
Q psy74 96 DGKRSTGISAVWVAR-NRFAVLDRNHTILIKNLKNE 130 (134)
Q Consensus 96 ~~~~g~g~~AvFVaR-NRfAvldk~~~i~Iknl~n~ 130 (134)
....+...+..|=.. +.+|+-..+++|.|-+++++
T Consensus 189 ~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~~ 224 (434)
T 2oit_A 189 LPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQ 224 (434)
T ss_dssp ECGGGCEEEEEECTTSSCEEEEETTSCEEEECTTCC
T ss_pred cCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccCCc
Confidence 123334555666533 45666666888999888743
No 75
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=78.31 E-value=24 Score=28.24 Aligned_cols=102 Identities=9% Similarity=0.171 Sum_probs=59.6
Q ss_pred EEEEEeCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCc---cccc--
Q psy74 19 VMYYVKERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEES---ERKE-- 93 (134)
Q Consensus 19 ~L~Yvkek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~---~~~~-- 93 (134)
.|++.....|+..|+.+.....+++ ....|..|.|.+.+..+.++.. .++. ++.+..+.. +...
T Consensus 85 ~ll~~~~~~I~~i~l~~~~~~~~~~----~~~~~~~l~~d~~~~~lywsD~-----~~~~--I~~~~~~g~~~~~~~~~~ 153 (400)
T 3p5b_L 85 YLFFTNRHEVRKMTLDRSEYTSLIP----NLRNVVALDTEVASNRIYWSDL-----SQRM--ICSTQLDRAHGVSSYDTV 153 (400)
T ss_dssp EEEEEETTEEEEECTTSCSCEEEEC----SCSCEEEEEEETTTTEEEEEET-----TTTE--EEEEEC------CCCEEE
T ss_pred eeEEeccceeEEEccCCcceeEecc----ccCcceEEeeeeccCceEEEec-----CCCe--EEEEEcccCCCCCcceEE
Confidence 5777899999999998765444322 2335789999999998877644 2333 222222211 1111
Q ss_pred -ccCCccccceeEEEEeCCeEEEEec-CCEEEEEeCCCceE
Q psy74 94 -VADGKRSTGISAVWVARNRFAVLDR-NHTILIKNLKNEFC 132 (134)
Q Consensus 94 -~~~~~~g~g~~AvFVaRNRfAvldk-~~~i~Iknl~n~~~ 132 (134)
......-.|++.-|+++ ++.+.|. ++.|.+-++++...
T Consensus 154 ~~~~~~~p~glavD~~~~-~lY~~d~~~~~I~~~~~~g~~~ 193 (400)
T 3p5b_L 154 ISRDIQAPDGLAVDWIHS-NIYWTDSVLGTVSVADTKGVKR 193 (400)
T ss_dssp ECSSCSCEEEEEEETTTT-EEEEEETTTTEEEEECTTTCSE
T ss_pred EeCCCCCcccEEEEecCC-ceEEEECCCCeEEEEeCCCCce
Confidence 01112223555445544 4666676 88999999886543
No 76
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=78.25 E-value=19 Score=26.99 Aligned_cols=96 Identities=9% Similarity=0.102 Sum_probs=58.4
Q ss_pred eCCeEEEEECCCCCceeeEEeec--CC---CCCceEEEeccCCCeEEEEeccCCCCCC--ceEEEEEccCCCc-cccccc
Q psy74 24 KERFLHRLDLTNSKDSVVMQLRG--GG---RIPAHSISYNATEHSILVTTRNANNFEN--STYDLYMIPKEES-ERKEVA 95 (134)
Q Consensus 24 kek~l~~~D~~t~~~~~~~slrg--~~---~~~~~slsyNpae~~vLv~~~~~~~~d~--g~yeL~~lpk~~~-~~~~~~ 95 (134)
.+..|+.||+.+.+ ++..+++ .. -.+...+.++|....+++.+. |+ |...++.+..... .. -
T Consensus 205 ~dg~i~i~d~~~~~--~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~-----d~~~g~i~i~d~~~~~~~~~---~ 274 (397)
T 1sq9_A 205 NNGTVQISELSTLR--PLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHD-----SNSFGCITLYETEFGERIGS---L 274 (397)
T ss_dssp TTSEEEEEETTTTE--EEEEEECCC---CCCCCEEEEEECSSTTEEEEEEE-----ETTEEEEEEEETTTCCEEEE---E
T ss_pred CCCcEEEEECCCCc--eeEEEeccccccccCCccceEEECCCCCEEEEEec-----CCCCceEEEEECCCCcccce---e
Confidence 78999999998743 4444443 02 446889999998776666543 32 5666665543311 11 1
Q ss_pred CC-------------ccccceeEEEEeC-CeEEEEecCCEEEEEeCCC
Q psy74 96 DG-------------KRSTGISAVWVAR-NRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 96 ~~-------------~~g~g~~AvFVaR-NRfAvldk~~~i~Iknl~n 129 (134)
.. ..+...+..|-.- +.+|+-..+++|.|-|+..
T Consensus 275 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 322 (397)
T 1sq9_A 275 SVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKT 322 (397)
T ss_dssp CBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred ccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 11 3444455566543 4555556689999999853
No 77
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=78.13 E-value=18 Score=26.53 Aligned_cols=103 Identities=15% Similarity=0.200 Sum_probs=56.5
Q ss_pred CEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCc-cccccc
Q psy74 18 NVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEES-ERKEVA 95 (134)
Q Consensus 18 n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~-~~~~~~ 95 (134)
+.|+-. .++.|+.||+.+... +..+....-.+...+.++|....++..+ ..|...++.+..... .... .
T Consensus 162 ~~l~~~~~d~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~------~d~~i~iwd~~~~~~~~~~~-~ 232 (312)
T 4ery_A 162 SLIVSSSYDGLCRIWDTASGQC--LKTLIDDDNPPVSFVKFSPNGKYILAAT------LDNTLKLWDYSKGKCLKTYT-G 232 (312)
T ss_dssp SEEEEEETTSCEEEEETTTCCE--EEEECCSSCCCEEEEEECTTSSEEEEEE------TTTEEEEEETTTTEEEEEEC-S
T ss_pred CEEEEEeCCCcEEEEECCCCce--eeEEeccCCCceEEEEECCCCCEEEEEc------CCCeEEEEECCCCcEEEEEE-e
Confidence 334434 899999999987543 2333322233567799999888776653 335677776554321 1000 0
Q ss_pred CCccccceeEEEE-eCCeEEEE-ecCCEEEEEeCCC
Q psy74 96 DGKRSTGISAVWV-ARNRFAVL-DRNHTILIKNLKN 129 (134)
Q Consensus 96 ~~~~g~g~~AvFV-aRNRfAvl-dk~~~i~Iknl~n 129 (134)
......+..+.|. ...++++- ..+++|.|-|++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~ 268 (312)
T 4ery_A 233 HKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 268 (312)
T ss_dssp SCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTT
T ss_pred cCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCC
Confidence 1111233444444 33444443 3478898888853
No 78
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=78.10 E-value=21 Score=27.35 Aligned_cols=108 Identities=6% Similarity=0.056 Sum_probs=58.5
Q ss_pred CCEEEEE-eCCeEEEEECCCCCceeeEEe-ecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCcccccc
Q psy74 17 NNVMYYV-KERFLHRLDLTNSKDSVVMQL-RGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEV 94 (134)
Q Consensus 17 ~n~L~Yv-kek~l~~~D~~t~~~~~~~sl-rg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~ 94 (134)
++.|+-. .++.|+.||+.+.. .+..+ .+..-..+..+.+.|....+++.+. ...+|...++.+..........
T Consensus 188 ~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~---~~~d~~i~iwd~~~~~~~~~~~ 262 (402)
T 2aq5_A 188 GALICTSCRDKRVRVIEPRKGT--VVAEKDRPHEGTRPVHAVFVSEGKILTTGFS---RMSERQVALWDTKHLEEPLSLQ 262 (402)
T ss_dssp SSCEEEEETTSEEEEEETTTTE--EEEEEECSSCSSSCCEEEECSTTEEEEEEEC---TTCCEEEEEEETTBCSSCSEEE
T ss_pred CCEEEEEecCCcEEEEeCCCCc--eeeeeccCCCCCcceEEEEcCCCcEEEEecc---CCCCceEEEEcCccccCCceEE
Confidence 4445555 89999999998744 44455 3322224678999987654444321 0245677777654332100000
Q ss_pred cCCccccceeEEEEeCCeEE-EEec-CCEEEEEeCCC
Q psy74 95 ADGKRSTGISAVWVARNRFA-VLDR-NHTILIKNLKN 129 (134)
Q Consensus 95 ~~~~~g~g~~AvFVaRNRfA-vldk-~~~i~Iknl~n 129 (134)
.-...+...+..|-.-.++. +--. +++|.|.++++
T Consensus 263 ~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~ 299 (402)
T 2aq5_A 263 ELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITS 299 (402)
T ss_dssp ECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECS
T ss_pred eccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecC
Confidence 11112223334444444444 4454 78899999864
No 79
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=77.74 E-value=18 Score=26.34 Aligned_cols=48 Identities=15% Similarity=0.121 Sum_probs=32.5
Q ss_pred EEEE-E-eCCeEEEEECCCCCc---eeeEEeecCCCCCceEEEeccCCCeEEEE
Q psy74 19 VMYY-V-KERFLHRLDLTNSKD---SVVMQLRGGGRIPAHSISYNATEHSILVT 67 (134)
Q Consensus 19 ~L~Y-v-kek~l~~~D~~t~~~---~~~~slrg~~~~~~~slsyNpae~~vLv~ 67 (134)
.++. . .|+.|+.||+.+... .+...++| .-.+...+.++|...-++..
T Consensus 52 ~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~-h~~~V~~~~~s~dg~~l~s~ 104 (340)
T 4aow_A 52 DMILSASRDKTIIMWKLTRDETNYGIPQRALRG-HSHFVSDVVISSDGQFALSG 104 (340)
T ss_dssp TEEEEEETTSCEEEEEECCSSSCSEEEEEEECC-CSSCEEEEEECTTSSEEEEE
T ss_pred CEEEEEcCCCeEEEEECCCCCcccceeeEEEeC-CCCCEEEEEECCCCCEEEEE
Confidence 3444 3 899999999988432 34455554 33467899999977655544
No 80
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=77.70 E-value=13 Score=28.76 Aligned_cols=64 Identities=5% Similarity=0.125 Sum_probs=43.2
Q ss_pred eCCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCC
Q psy74 16 HNNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKE 87 (134)
Q Consensus 16 ~~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~ 87 (134)
.+..|.-- .|+.|+.||+.+.+ ++..+......+..+|.++|....++-. ...++--+..||..
T Consensus 280 dg~~lasgs~D~~V~iwd~~~~~--~~~~~~~gH~~~V~~v~fSpdg~~laS~------S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 280 KGELAVLASNDNSIALVKLKDLS--MSKIFKQAHSFAITEVTISPDSTYVASV------SAANTIHIIKLPLN 344 (365)
T ss_dssp TSCEEEEEETTSCEEEEETTTTE--EEEEETTSSSSCEEEEEECTTSCEEEEE------ETTSEEEEEECCTT
T ss_pred CCCceEEEcCCCEEEEEECCCCc--EEEEecCcccCCEEEEEECCCCCEEEEE------eCCCeEEEEEcCCC
Confidence 34444444 89999999998743 4444432244478999999977654443 24458999999976
No 81
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=77.67 E-value=24 Score=27.86 Aligned_cols=108 Identities=14% Similarity=0.192 Sum_probs=59.3
Q ss_pred cceeeCCEEEEEe----CCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCC
Q psy74 12 AYTVHNNVMYYVK----ERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKE 87 (134)
Q Consensus 12 a~~~~~n~L~Yvk----ek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~ 87 (134)
+|.-.+..|+|.. +..|+.||+.+..- ..+.+. ......+++.|....+++.+. ++|...|+.+..+
T Consensus 229 ~~spdg~~la~~~~~~g~~~i~~~d~~~~~~---~~l~~~-~~~~~~~~~spdg~~l~~~s~-----~~g~~~i~~~d~~ 299 (415)
T 2hqs_A 229 AFSPDGSKLAFALSKTGSLNLYVMDLASGQI---RQVTDG-RSNNTEPTWFPDSQNLAFTSD-----QAGRPQVYKVNIN 299 (415)
T ss_dssp EECTTSSEEEEEECTTSSCEEEEEETTTCCE---EECCCC-SSCEEEEEECTTSSEEEEEEC-----TTSSCEEEEEETT
T ss_pred EEcCCCCEEEEEEecCCCceEEEEECCCCCE---EeCcCC-CCcccceEECCCCCEEEEEEC-----CCCCcEEEEEECC
Confidence 3444567788873 45699999987542 334321 235678999999887777754 3455667765433
Q ss_pred CcccccccCCccccceeEEEEeCCeEEEE-ec---CCEEEEEeCCC
Q psy74 88 ESERKEVADGKRSTGISAVWVARNRFAVL-DR---NHTILIKNLKN 129 (134)
Q Consensus 88 ~~~~~~~~~~~~g~g~~AvFVaRNRfAvl-dk---~~~i~Iknl~n 129 (134)
.. .........+...+..|-...++++. .. ..+|.+-|++.
T Consensus 300 ~~-~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~ 344 (415)
T 2hqs_A 300 GG-APQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLAT 344 (415)
T ss_dssp SS-CCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTT
T ss_pred CC-CEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCC
Confidence 22 11111111122334455444444333 32 24677777753
No 82
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=77.58 E-value=19 Score=26.48 Aligned_cols=103 Identities=12% Similarity=0.117 Sum_probs=58.0
Q ss_pred eCCEEEEE-eCCeEEEEECCCCCceeeEEeec-CCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCc-ccc
Q psy74 16 HNNVMYYV-KERFLHRLDLTNSKDSVVMQLRG-GGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEES-ERK 92 (134)
Q Consensus 16 ~~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg-~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~-~~~ 92 (134)
.++.||.. .+..|..||..+.+-.....+.+ .....+..+.+.|....+.+... +++...++.+..... ...
T Consensus 195 dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-----~~~~v~~~d~~~~~~~~~~ 269 (353)
T 3vgz_A 195 EGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDS-----KAAEVLVVDTRNGNILAKV 269 (353)
T ss_dssp TTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEES-----SSSEEEEEETTTCCEEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeC-----CCCEEEEEECCCCcEEEEE
Confidence 45566665 77899999998865554444431 23335678999999887777643 334444444322111 111
Q ss_pred cccCCccccceeEEEEeCCe-EEEEec-CCEEEEEeCC
Q psy74 93 EVADGKRSTGISAVWVARNR-FAVLDR-NHTILIKNLK 128 (134)
Q Consensus 93 ~~~~~~~g~g~~AvFVaRNR-fAvldk-~~~i~Iknl~ 128 (134)
+ -+.+....|-.-.+ +.+-+. +++|.+-|++
T Consensus 270 ~-----~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~ 302 (353)
T 3vgz_A 270 A-----APESLAVLFNPARNEAYVTHRQAGKVSVIDAK 302 (353)
T ss_dssp E-----CSSCCCEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred E-----cCCCceEEECCCCCEEEEEECCCCeEEEEECC
Confidence 1 11223344443333 555554 6778887774
No 83
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=76.71 E-value=34 Score=28.97 Aligned_cols=111 Identities=14% Similarity=0.113 Sum_probs=59.0
Q ss_pred CcceeeCCEEEEE-eCCe-------------EEEEECCCCCc--eeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCC
Q psy74 11 PAYTVHNNVMYYV-KERF-------------LHRLDLTNSKD--SVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNF 74 (134)
Q Consensus 11 Pa~~~~~n~L~Yv-kek~-------------l~~~D~~t~~~--~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~ 74 (134)
|+|+-.+..|+|. .+.. |+.||+.+... ..+....+. ......+++.|...-+++... .
T Consensus 173 ~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~-~~~~~~~~~SpDG~~l~~~~~----~ 247 (695)
T 2bkl_A 173 PKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGD-PTTFLQSDLSRDGKYLFVYIL----R 247 (695)
T ss_dssp CEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCC-TTCEEEEEECTTSCCEEEEEE----E
T ss_pred eEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCC-CEEEEEEEECCCCCEEEEEEe----C
Confidence 4455566789998 4333 99999998553 333333221 123457788898877776654 1
Q ss_pred CCceEEEEEccCCCcccccccCCccccceeEEEEeCCeEEEEec----CCEEEEEeCC
Q psy74 75 ENSTYDLYMIPKEESERKEVADGKRSTGISAVWVARNRFAVLDR----NHTILIKNLK 128 (134)
Q Consensus 75 d~g~yeL~~lpk~~~~~~~~~~~~~g~g~~AvFVaRNRfAvldk----~~~i~Iknl~ 128 (134)
+.+..+|+.+... ++....-....+.....+| ...++++... +.+|.+-+++
T Consensus 248 ~~~~~~l~~~~~~-~~~~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~ 303 (695)
T 2bkl_A 248 GWSENDVYWKRPG-EKDFRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPA 303 (695)
T ss_dssp TTTEEEEEEECTT-CSSCEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTT
T ss_pred CCCceEEEEEcCC-CCceEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCC
Confidence 2156788876322 2221111111122233444 4555444432 4667777774
No 84
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=76.55 E-value=22 Score=26.69 Aligned_cols=105 Identities=6% Similarity=0.023 Sum_probs=59.4
Q ss_pred CCEEEEE-eC---CeEEEEECCCCCceeeEEeecC------------CCCCceEEEeccCCCeEEEEeccCCCCCCceEE
Q psy74 17 NNVMYYV-KE---RFLHRLDLTNSKDSVVMQLRGG------------GRIPAHSISYNATEHSILVTTRNANNFENSTYD 80 (134)
Q Consensus 17 ~n~L~Yv-ke---k~l~~~D~~t~~~~~~~slrg~------------~~~~~~slsyNpae~~vLv~~~~~~~~d~g~ye 80 (134)
++.|+-. .+ ..|+.||+.+.+ ++..+++. ...+...+.++|....++..+ .+|...
T Consensus 245 ~~~l~~~~~d~~~g~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------~dg~i~ 316 (397)
T 1sq9_A 245 GSLLAIAHDSNSFGCITLYETEFGE--RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG------WDGKLR 316 (397)
T ss_dssp TTEEEEEEEETTEEEEEEEETTTCC--EEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEE------TTSEEE
T ss_pred CCEEEEEecCCCCceEEEEECCCCc--ccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEe------CCCeEE
Confidence 4445544 66 899999998754 34444431 344678999999877655542 334555
Q ss_pred EEEccCCCc-cccc---ccCCc---------------cccceeEEEEeC-----------CeEEEEecCCEEEEEeCCC
Q psy74 81 LYMIPKEES-ERKE---VADGK---------------RSTGISAVWVAR-----------NRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 81 L~~lpk~~~-~~~~---~~~~~---------------~g~g~~AvFVaR-----------NRfAvldk~~~i~Iknl~n 129 (134)
++.+..... .... ..... .+...+..|-.- +.+|.-..++.|.|-++++
T Consensus 317 iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 317 FWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp EEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred EEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCC
Confidence 655443211 1000 00011 333344555444 3566667799999998854
No 85
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=76.41 E-value=18 Score=27.05 Aligned_cols=62 Identities=13% Similarity=0.115 Sum_probs=38.1
Q ss_pred CEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCC-CeEEEEeccCCCCCCceEEEEEcc
Q psy74 18 NVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATE-HSILVTTRNANNFENSTYDLYMIP 85 (134)
Q Consensus 18 n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae-~~vLv~~~~~~~~d~g~yeL~~lp 85 (134)
+.|.=. .|+.++.||+.+..-..+..+.| .-.+..++.++|.+ ..+|++.. ..|...+..+.
T Consensus 72 ~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~-h~~~V~~v~~~p~~~g~~lasgs-----~D~~i~lwd~~ 135 (316)
T 3bg1_A 72 NILASCSYDRKVIIWREENGTWEKSHEHAG-HDSSVNSVCWAPHDYGLILACGS-----SDGAISLLTYT 135 (316)
T ss_dssp SCEEEEETTSCEEEECCSSSCCCEEEEECC-CSSCCCEEEECCTTTCSCEEEEC-----SSSCEEEEEEC
T ss_pred CEEEEEECCCEEEEEECCCCcceEEEEccC-CCCceEEEEECCCCCCcEEEEEc-----CCCCEEEEecC
Confidence 334444 78999999998754445555553 23367899999985 34444433 33455555443
No 86
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=76.27 E-value=31 Score=28.39 Aligned_cols=70 Identities=13% Similarity=0.194 Sum_probs=44.3
Q ss_pred CcceeeCCEEEEE-eC--------CeEEEEECC-CCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEE
Q psy74 11 PAYTVHNNVMYYV-KE--------RFLHRLDLT-NSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYD 80 (134)
Q Consensus 11 Pa~~~~~n~L~Yv-ke--------k~l~~~D~~-t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~ye 80 (134)
|+++-.+..|+|+ .+ ..|+.+|+. ++.......|.+..-...+++.+.|... +++.+. .+|.+.
T Consensus 193 ~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~-----~~~~~~ 266 (662)
T 3azo_A 193 PRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVATD-----RTGWWN 266 (662)
T ss_dssp CEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEEC-----TTSSCE
T ss_pred ceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe-EEEEEC-----CCCCeE
Confidence 4555567889998 34 379999998 4532233344321122467888999888 666544 335778
Q ss_pred EEEccC
Q psy74 81 LYMIPK 86 (134)
Q Consensus 81 L~~lpk 86 (134)
|+.+.-
T Consensus 267 l~~~~~ 272 (662)
T 3azo_A 267 LHRVDP 272 (662)
T ss_dssp EEEECT
T ss_pred EEEEEC
Confidence 887753
No 87
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=75.99 E-value=20 Score=26.12 Aligned_cols=108 Identities=7% Similarity=-0.005 Sum_probs=60.9
Q ss_pred eeCCEEEEE-eCCeEEEEECCC-CCceeeEEeecCCCCCceEEEecc-CCCeEEEEeccCCCCCCceEEEEEccCCC---
Q psy74 15 VHNNVMYYV-KERFLHRLDLTN-SKDSVVMQLRGGGRIPAHSISYNA-TEHSILVTTRNANNFENSTYDLYMIPKEE--- 88 (134)
Q Consensus 15 ~~~n~L~Yv-kek~l~~~D~~t-~~~~~~~slrg~~~~~~~slsyNp-ae~~vLv~~~~~~~~d~g~yeL~~lpk~~--- 88 (134)
.+.+.|+-. .++.|+.||+.+ ... +..........+++.+.++| ....+++.+ +.|...++.+....
T Consensus 158 ~~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~------~dg~i~i~~~~~~~~~~ 230 (342)
T 1yfq_A 158 TNSSRLIVGMNNSQVQWFRLPLCEDD-NGTIEESGLKYQIRDVALLPKEQEGYACSS------IDGRVAVEFFDDQGDDY 230 (342)
T ss_dssp ECSSEEEEEESTTEEEEEESSCCTTC-CCEEEECSCSSCEEEEEECSGGGCEEEEEE------TTSEEEEEECCTTCCST
T ss_pred ecCCcEEEEeCCCeEEEEECCccccc-cceeeecCCCCceeEEEECCCCCCEEEEEe------cCCcEEEEEEcCCCccc
Confidence 355555544 888999999997 433 22222222334678999999 766555542 34566666554330
Q ss_pred --c--cccccc------CCccccceeEEEEe-CCeEEEEecCCEEEEEeCCC
Q psy74 89 --S--ERKEVA------DGKRSTGISAVWVA-RNRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 89 --~--~~~~~~------~~~~g~g~~AvFVa-RNRfAvldk~~~i~Iknl~n 129 (134)
. ...... ....+...+..|-. .+.+|+-..+++|.|-|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 282 (342)
T 1yfq_A 231 NSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQT 282 (342)
T ss_dssp TCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTT
T ss_pred ccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCcc
Confidence 1 000000 01122344455554 34577777788999999863
No 88
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=75.95 E-value=28 Score=27.71 Aligned_cols=105 Identities=9% Similarity=-0.035 Sum_probs=60.8
Q ss_pred CEEEEE-eCCeEEEEECCCC------CceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCcc
Q psy74 18 NVMYYV-KERFLHRLDLTNS------KDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESE 90 (134)
Q Consensus 18 n~L~Yv-kek~l~~~D~~t~------~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~ 90 (134)
+.|.-. .+..|+.||+.+. ....+..+++ .-.+...|.++|....++.... ...+.-.+..+-....
T Consensus 79 ~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~----~~~~~~~v~~~d~~~~- 152 (615)
T 1pgu_A 79 QYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQV-LAGPISDISWDFEGRRLCVVGE----GRDNFGVFISWDSGNS- 152 (615)
T ss_dssp CEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEEC-CSSCEEEEEECTTSSEEEEEEC----CSSCSEEEEETTTCCE-
T ss_pred CEEEEecCCCEEEEEeCCCCcccccccccccchhhc-ccccEEEEEEeCCCCEEEEecc----CCCCccEEEEEECCCc-
Confidence 444444 7889999999764 2333444442 3346899999999888777654 2222233443331111
Q ss_pred cccccCCccccceeEEEEeCC--eEEEEecCCEEEEEeCCC
Q psy74 91 RKEVADGKRSTGISAVWVARN--RFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 91 ~~~~~~~~~g~g~~AvFVaRN--RfAvldk~~~i~Iknl~n 129 (134)
...-....+...+..|-..+ .+|+-..+++|.|-|+..
T Consensus 153 -~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~ 192 (615)
T 1pgu_A 153 -LGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPP 192 (615)
T ss_dssp -EEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTT
T ss_pred -ceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCC
Confidence 11112333444555565554 577777788999988764
No 89
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=75.18 E-value=26 Score=26.86 Aligned_cols=101 Identities=9% Similarity=0.183 Sum_probs=56.0
Q ss_pred EEEEEeCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCc---ccccc-
Q psy74 19 VMYYVKERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEES---ERKEV- 94 (134)
Q Consensus 19 ~L~Yvkek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~---~~~~~- 94 (134)
.|+|...+.|+..|+.+.....+++ ....|..+.|++.+..+.++.. .++. ++.+..+.. +..+.
T Consensus 3 ~ll~~~~~~I~~i~~~~~~~~~~~~----~~~~p~g~~~d~~~~~ly~~D~-----~~~~--I~~~~~~g~~~~~~~~~~ 71 (316)
T 1ijq_A 3 YLFFTNRHEVRKMTLDRSEYTSLIP----NLRNVVALDTEVASNRIYWSDL-----SQRM--ICSTQLDRAHGVSSYDTV 71 (316)
T ss_dssp EEEEECBSSEEEEETTSCCCEEEEC----SCSSEEEEEEETTTTEEEEEET-----TTTE--EEEEEC--------CEEE
T ss_pred EEEEECCCeEEEEECCCcceEehhc----CCCceEEEEEEeCCCEEEEEEC-----CCCc--EEEEECCCCCCCcccEEE
Confidence 5888888999999999865544432 2235889999998888777643 2222 222222210 00000
Q ss_pred --cCCccccceeEEEEeCCeEEEEec-CCEEEEEeCCCce
Q psy74 95 --ADGKRSTGISAVWVARNRFAVLDR-NHTILIKNLKNEF 131 (134)
Q Consensus 95 --~~~~~g~g~~AvFVaRNRfAvldk-~~~i~Iknl~n~~ 131 (134)
.....-.|.+.-|.++ ++.+.|. ++.|.+-++++..
T Consensus 72 ~~~~~~~p~glavd~~~~-~ly~~d~~~~~I~~~~~~g~~ 110 (316)
T 1ijq_A 72 ISRDIQAPDGLAVDWIHS-NIYWTDSVLGTVSVADTKGVK 110 (316)
T ss_dssp ECSSCSCCCEEEEETTTT-EEEEEETTTTEEEEEETTSSS
T ss_pred EeCCCCCcCEEEEeecCC-eEEEEECCCCEEEEEeCCCCc
Confidence 0011113444334444 4555565 7788888887653
No 90
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=75.09 E-value=26 Score=26.92 Aligned_cols=104 Identities=13% Similarity=0.153 Sum_probs=63.2
Q ss_pred EEEE-eCCeEEEEECCCCCceeeEEee--cCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCcccccccC
Q psy74 20 MYYV-KERFLHRLDLTNSKDSVVMQLR--GGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVAD 96 (134)
Q Consensus 20 L~Yv-kek~l~~~D~~t~~~~~~~slr--g~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~~~ 96 (134)
|+-. .|+.|+.||+.+......+... ........+++++|.+...|++.. ..|+..+..+..... ....-.
T Consensus 173 l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs-----~D~~v~~wd~~~~~~-~~~~~~ 246 (380)
T 3iz6_a 173 LITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGS-----CDTTVRLWDLRITSR-AVRTYH 246 (380)
T ss_dssp EEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEE-----TTSCEEEEETTTTCC-CCEEEC
T ss_pred EEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEE-----CCCeEEEEECCCCCc-ceEEEC
Confidence 4444 8999999999986655444322 223446789999997777777654 345677776542211 011122
Q ss_pred CccccceeEEEEeC-CeEEEEecCCEEEEEeCCC
Q psy74 97 GKRSTGISAVWVAR-NRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 97 ~~~g~g~~AvFVaR-NRfAvldk~~~i~Iknl~n 129 (134)
++.+.-.+..|-.- +.||.-..+++|.|-|+..
T Consensus 247 ~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~ 280 (380)
T 3iz6_a 247 GHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRT 280 (380)
T ss_dssp CCSSCCCEEEECTTSSEEEEECSSSCEEEEETTT
T ss_pred CcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCC
Confidence 34444455555543 3566666688899988853
No 91
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=74.74 E-value=24 Score=26.33 Aligned_cols=105 Identities=15% Similarity=0.238 Sum_probs=57.1
Q ss_pred eCC-EEEEE-eCCeEEEEEC----CCCCc---e-eeEEee----cC-----CCCCceEEEeccCCCeEEEEeccCCCCCC
Q psy74 16 HNN-VMYYV-KERFLHRLDL----TNSKD---S-VVMQLR----GG-----GRIPAHSISYNATEHSILVTTRNANNFEN 76 (134)
Q Consensus 16 ~~n-~L~Yv-kek~l~~~D~----~t~~~---~-~~~slr----g~-----~~~~~~slsyNpae~~vLv~~~~~~~~d~ 76 (134)
.+. .|+.. .+..|+.||+ .+... . ....++ +. .-.+...|.++|....+++.. .+
T Consensus 56 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~------~d 129 (425)
T 1r5m_A 56 LDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGV------EN 129 (425)
T ss_dssp SCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEE------TT
T ss_pred CCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEe------CC
Confidence 345 56665 7899999999 66441 0 233333 11 233688999999776665543 33
Q ss_pred ceEEEEEccCCCcccccccCCccccceeEEEEeCC-eEEEEecCCEEEEEeCCC
Q psy74 77 STYDLYMIPKEESERKEVADGKRSTGISAVWVARN-RFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 77 g~yeL~~lpk~~~~~~~~~~~~~g~g~~AvFVaRN-RfAvldk~~~i~Iknl~n 129 (134)
|...++..... ....-....+...+..|-.-+ .+++-..+++|.|-|++.
T Consensus 130 g~i~i~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 180 (425)
T 1r5m_A 130 GELRLWNKTGA---LLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVIS 180 (425)
T ss_dssp SCEEEEETTSC---EEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTT
T ss_pred CeEEEEeCCCC---eeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCC
Confidence 45666541111 111112334444555565433 466666788899999853
No 92
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=74.26 E-value=38 Score=28.39 Aligned_cols=104 Identities=16% Similarity=0.169 Sum_probs=57.5
Q ss_pred CCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCc-ccccc
Q psy74 17 NNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEES-ERKEV 94 (134)
Q Consensus 17 ~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~-~~~~~ 94 (134)
++.|.-. .|+.|+.||+.+... +..+.| +-.+..++.++|....++..+. | |+..+..+..... .....
T Consensus 442 g~~l~sgs~Dg~v~vwd~~~~~~--~~~~~~-h~~~v~~~~~s~~~~~l~s~s~-----D-~~i~iwd~~~~~~~~~~~~ 512 (694)
T 3dm0_A 442 GQFALSGSWDGELRLWDLAAGVS--TRRFVG-HTKDVLSVAFSLDNRQIVSASR-----D-RTIKLWNTLGECKYTISEG 512 (694)
T ss_dssp SSEEEEEETTSEEEEEETTTTEE--EEEEEC-CSSCEEEEEECTTSSCEEEEET-----T-SCEEEECTTSCEEEEECSS
T ss_pred CCEEEEEeCCCcEEEEECCCCcc--eeEEeC-CCCCEEEEEEeCCCCEEEEEeC-----C-CEEEEEECCCCcceeeccC
Confidence 3344444 799999999987543 233333 3336789999998776665533 3 3455543321111 00001
Q ss_pred cCCccccceeEEEEeC---CeEEEEecCCEEEEEeCCC
Q psy74 95 ADGKRSTGISAVWVAR---NRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 95 ~~~~~g~g~~AvFVaR---NRfAvldk~~~i~Iknl~n 129 (134)
.+.+++...+..|-.. +.++.-..+++|.|-|+.+
T Consensus 513 ~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~ 550 (694)
T 3dm0_A 513 GEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSN 550 (694)
T ss_dssp TTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTT
T ss_pred CCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCC
Confidence 1233333344444322 3466666688899999864
No 93
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=73.84 E-value=25 Score=26.06 Aligned_cols=103 Identities=10% Similarity=0.032 Sum_probs=59.7
Q ss_pred eCCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCcccccc
Q psy74 16 HNNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEV 94 (134)
Q Consensus 16 ~~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~ 94 (134)
.+..|.=. .+..++.||+.+... +..+++ ...+.+.+.+.|..+.++..+ +.|...++.+..... ...
T Consensus 24 ~~~~l~s~~~dg~v~lWd~~~~~~--~~~~~~-~~~~v~~~~~~~~~~~l~s~s------~d~~i~vwd~~~~~~--~~~ 92 (304)
T 2ynn_A 24 TEPWVLTTLYSGRVELWNYETQVE--VRSIQV-TETPVRAGKFIARKNWIIVGS------DDFRIRVFNYNTGEK--VVD 92 (304)
T ss_dssp SSSEEEEEETTSEEEEEETTTTEE--EEEEEC-CSSCEEEEEEEGGGTEEEEEE------TTSEEEEEETTTCCE--EEE
T ss_pred CCCEEEEEcCCCcEEEEECCCCce--eEEeec-cCCcEEEEEEeCCCCEEEEEC------CCCEEEEEECCCCcE--EEE
Confidence 44445544 899999999987543 334442 223678899999877666553 345666665443211 001
Q ss_pred cCCccccceeEEEEeCCe-EEEEecCCEEEEEeCCC
Q psy74 95 ADGKRSTGISAVWVARNR-FAVLDRNHTILIKNLKN 129 (134)
Q Consensus 95 ~~~~~g~g~~AvFVaRNR-fAvldk~~~i~Iknl~n 129 (134)
-..+.+...+..|-..++ +|.-..+++|.|-|+++
T Consensus 93 ~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~ 128 (304)
T 2ynn_A 93 FEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWEN 128 (304)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGG
T ss_pred EeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCC
Confidence 123334344455544444 45455588899888854
No 94
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=73.73 E-value=25 Score=26.13 Aligned_cols=107 Identities=8% Similarity=0.121 Sum_probs=55.0
Q ss_pred eCCEEEEE--eCCeEEEEECCC-CCceeeEEee--cCC------CCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEc
Q psy74 16 HNNVMYYV--KERFLHRLDLTN-SKDSVVMQLR--GGG------RIPAHSISYNATEHSILVTTRNANNFENSTYDLYMI 84 (134)
Q Consensus 16 ~~n~L~Yv--kek~l~~~D~~t-~~~~~~~slr--g~~------~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~l 84 (134)
.+..||.. .+..++.||+.. ..-..+..+. |.. -..++.+.+.|... ++++.. +++...++.+
T Consensus 96 dg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~-----~~~~v~~~~~ 169 (347)
T 3hfq_A 96 ARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDL-----GSDKVYVYNV 169 (347)
T ss_dssp TTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEET-----TTTEEEEEEE
T ss_pred CCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeC-----CCCEEEEEEE
Confidence 35556666 357899999975 3333444444 221 12367899999988 555533 3445556655
Q ss_pred cCCCc-ccccccCCccccceeEEEEeCC-e-EEEEec-CCEEEEEeCC
Q psy74 85 PKEES-ERKEVADGKRSTGISAVWVARN-R-FAVLDR-NHTILIKNLK 128 (134)
Q Consensus 85 pk~~~-~~~~~~~~~~g~g~~AvFVaRN-R-fAvldk-~~~i~Iknl~ 128 (134)
..+.. ..........|.+...+-++.+ + +++.+. +++|.|.+++
T Consensus 170 ~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~ 217 (347)
T 3hfq_A 170 SDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYD 217 (347)
T ss_dssp CTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred CCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 42211 1000001112223333334433 3 455455 6777777765
No 95
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=73.64 E-value=24 Score=25.80 Aligned_cols=103 Identities=6% Similarity=0.062 Sum_probs=61.3
Q ss_pred EEEE-eCCeEEEEECCCCCceeeEE-ee-cCCCCCceEEEeccCCC---eEEEEeccCCCCCCceEEEEEccCCCccccc
Q psy74 20 MYYV-KERFLHRLDLTNSKDSVVMQ-LR-GGGRIPAHSISYNATEH---SILVTTRNANNFENSTYDLYMIPKEESERKE 93 (134)
Q Consensus 20 L~Yv-kek~l~~~D~~t~~~~~~~s-lr-g~~~~~~~slsyNpae~---~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~ 93 (134)
++-. .+..|+.||+.+......+. .. +..-.....+.++|... ..|++.. .+|...++.+..... ..
T Consensus 37 ~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~-----~dg~i~v~d~~~~~~--~~ 109 (366)
T 3k26_A 37 VFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG-----SRGIIRIINPITMQC--IK 109 (366)
T ss_dssp EEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE-----TTCEEEEECTTTCCE--EE
T ss_pred EEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec-----CCCEEEEEEchhceE--ee
Confidence 4443 78899999999755443333 22 22344678999998743 3555433 445677765543211 10
Q ss_pred ccCCccccceeEEEEe--CCeEEEEecCCEEEEEeCCC
Q psy74 94 VADGKRSTGISAVWVA--RNRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 94 ~~~~~~g~g~~AvFVa--RNRfAvldk~~~i~Iknl~n 129 (134)
.-....+...+..|-. .+.+|+-..+++|.|-|++.
T Consensus 110 ~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 147 (366)
T 3k26_A 110 HYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT 147 (366)
T ss_dssp EEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred eecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec
Confidence 1123344445555653 46777777789999999964
No 96
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=73.20 E-value=27 Score=26.23 Aligned_cols=101 Identities=10% Similarity=0.084 Sum_probs=55.8
Q ss_pred eCCEEEEE--eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCccccc
Q psy74 16 HNNVMYYV--KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKE 93 (134)
Q Consensus 16 ~~n~L~Yv--kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~ 93 (134)
.++.||+. .+..|+.||+.+.+....+.. + ..+..+.+.|....++++.. +++...++.+..... ..
T Consensus 84 dg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-~---~~~~~~~~s~dg~~l~~~~~-----~~~~v~~~d~~~~~~--~~ 152 (391)
T 1l0q_A 84 DGKQVYVTNMASSTLSVIDTTSNTVAGTVKT-G---KSPLGLALSPDGKKLYVTNN-----GDKTVSVINTVTKAV--IN 152 (391)
T ss_dssp TSSEEEEEETTTTEEEEEETTTTEEEEEEEC-S---SSEEEEEECTTSSEEEEEET-----TTTEEEEEETTTTEE--EE
T ss_pred CCCEEEEEECCCCEEEEEECCCCeEEEEEeC-C---CCcceEEECCCCCEEEEEeC-----CCCEEEEEECCCCcE--EE
Confidence 35667776 358999999998654333322 2 14689999999887766644 334555554322111 00
Q ss_pred ccCCccccceeE-EEEeCCeEE-EEec-CCEEEEEeCCC
Q psy74 94 VADGKRSTGISA-VWVARNRFA-VLDR-NHTILIKNLKN 129 (134)
Q Consensus 94 ~~~~~~g~g~~A-vFVaRNRfA-vldk-~~~i~Iknl~n 129 (134)
. ...+.+... .|-.-.+.+ +... +++|.|.|+..
T Consensus 153 ~--~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~ 189 (391)
T 1l0q_A 153 T--VSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVT 189 (391)
T ss_dssp E--EECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred E--EecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 0 011122233 343334333 4444 77888888854
No 97
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=72.42 E-value=38 Score=28.36 Aligned_cols=103 Identities=15% Similarity=0.143 Sum_probs=60.0
Q ss_pred EEEEE--eCCeEEEEECCCCCc---eeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCccccc
Q psy74 19 VMYYV--KERFLHRLDLTNSKD---SVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKE 93 (134)
Q Consensus 19 ~L~Yv--kek~l~~~D~~t~~~---~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~ 93 (134)
.++.. .|+.|+.||+.+... .....++| +-.+.+.+.++|....++..+ ..|+-.+..+..... ..
T Consensus 396 ~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~-h~~~v~~v~~s~~g~~l~sgs------~Dg~v~vwd~~~~~~--~~ 466 (694)
T 3dm0_A 396 DIIVSASRDKSIILWKLTKDDKAYGVAQRRLTG-HSHFVEDVVLSSDGQFALSGS------WDGELRLWDLAAGVS--TR 466 (694)
T ss_dssp SEEEEEETTSEEEEEECCCSTTCSCEEEEEEEC-CSSCEEEEEECTTSSEEEEEE------TTSEEEEEETTTTEE--EE
T ss_pred CEEEEEeCCCcEEEEEccCCCcccccccceecC-CCCcEEEEEECCCCCEEEEEe------CCCcEEEEECCCCcc--ee
Confidence 34443 899999999987332 22333444 334678999999776655542 345666766543311 00
Q ss_pred ccCCccccceeEEEEeCC-eEEEEecCCEEEEEeCCCc
Q psy74 94 VADGKRSTGISAVWVARN-RFAVLDRNHTILIKNLKNE 130 (134)
Q Consensus 94 ~~~~~~g~g~~AvFVaRN-RfAvldk~~~i~Iknl~n~ 130 (134)
.-..+.+...+..|-.-+ .+|.-..+++|.|-|+..+
T Consensus 467 ~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~ 504 (694)
T 3dm0_A 467 RFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGE 504 (694)
T ss_dssp EEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSC
T ss_pred EEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCC
Confidence 112344444555565443 4666666888988887543
No 98
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=72.38 E-value=25 Score=25.58 Aligned_cols=99 Identities=9% Similarity=0.116 Sum_probs=54.9
Q ss_pred CCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEe--ccCCCeEEEEeccCCCCCCceEEEEEccCCCc-ccc
Q psy74 17 NNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISY--NATEHSILVTTRNANNFENSTYDLYMIPKEES-ERK 92 (134)
Q Consensus 17 ~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsy--Npae~~vLv~~~~~~~~d~g~yeL~~lpk~~~-~~~ 92 (134)
++.|+-. .++.|+.||+.+..-.. +.+ .-.+...+.+ +|....++.. . .+|...++.+..... ...
T Consensus 98 ~~~l~s~~~dg~v~iwd~~~~~~~~---~~~-~~~~v~~~~~~~~~~~~~l~~~-~-----~dg~i~vwd~~~~~~~~~~ 167 (368)
T 3mmy_A 98 GSKVFTASCDKTAKMWDLSSNQAIQ---IAQ-HDAPVKTIHWIKAPNYSCVMTG-S-----WDKTLKFWDTRSSNPMMVL 167 (368)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEE---EEE-CSSCEEEEEEEECSSCEEEEEE-E-----TTSEEEEECSSCSSCSEEE
T ss_pred CCEEEEEcCCCcEEEEEcCCCCcee---ecc-ccCceEEEEEEeCCCCCEEEEc-c-----CCCcEEEEECCCCcEEEEE
Confidence 3445555 89999999999765332 222 2236788999 5544444443 2 345666665543321 111
Q ss_pred cccCCccccceeEEEEeCCeEEEEecCCEEEEEeCCCc
Q psy74 93 EVADGKRSTGISAVWVARNRFAVLDRNHTILIKNLKNE 130 (134)
Q Consensus 93 ~~~~~~~g~g~~AvFVaRNRfAvldk~~~i~Iknl~n~ 130 (134)
+ . .+... ++-...+.+++....+.+.|.+++..
T Consensus 168 ~---~-~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~ 200 (368)
T 3mmy_A 168 Q---L-PERCY-CADVIYPMAVVATAERGLIVYQLENQ 200 (368)
T ss_dssp E---C-SSCEE-EEEEETTEEEEEEGGGCEEEEECSSS
T ss_pred e---c-CCCce-EEEecCCeeEEEeCCCcEEEEEeccc
Confidence 1 1 11223 33334566677666778888888653
No 99
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=71.31 E-value=30 Score=26.01 Aligned_cols=94 Identities=10% Similarity=0.126 Sum_probs=52.1
Q ss_pred eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCc-ccccccCCccccc
Q psy74 24 KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEES-ERKEVADGKRSTG 102 (134)
Q Consensus 24 kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~-~~~~~~~~~~g~g 102 (134)
.|+.|+.||+.+.. ++..+.+ .-.+..++.++|....++..+ +.|+..++.+..... ... ..+... .+
T Consensus 204 ~d~~v~~wd~~~~~--~~~~~~~-h~~~v~~v~~~p~~~~l~s~s------~d~~v~iwd~~~~~~~~~~-~~~~~~-~~ 272 (340)
T 1got_B 204 CDASAKLWDVREGM--CRQTFTG-HESDINAICFFPNGNAFATGS------DDATCRLFDLRADQELMTY-SHDNII-CG 272 (340)
T ss_dssp TTSCEEEEETTTCS--EEEEECC-CSSCEEEEEECTTSSEEEEEE------TTSCEEEEETTTTEEEEEE-CCTTCC-SC
T ss_pred CCCcEEEEECCCCe--eEEEEcC-CcCCEEEEEEcCCCCEEEEEc------CCCcEEEEECCCCcEEEEE-ccCCcc-cc
Confidence 79999999998754 3334443 233678999999887666553 345666666543211 000 001111 13
Q ss_pred eeE-EEEeCCeEE-EEecCCEEEEEeCC
Q psy74 103 ISA-VWVARNRFA-VLDRNHTILIKNLK 128 (134)
Q Consensus 103 ~~A-vFVaRNRfA-vldk~~~i~Iknl~ 128 (134)
..+ .|-.-.++. +=..+++|.|-|+.
T Consensus 273 v~~~~~s~~g~~l~~g~~d~~i~vwd~~ 300 (340)
T 1got_B 273 ITSVSFSKSGRLLLAGYDDFNCNVWDAL 300 (340)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred eEEEEECCCCCEEEEECCCCeEEEEEcc
Confidence 333 343333433 33447788888874
No 100
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=70.71 E-value=33 Score=26.15 Aligned_cols=107 Identities=7% Similarity=0.062 Sum_probs=59.2
Q ss_pred CCEEEEEeCCeEEEEECCC-CCceeeEEeec----CCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCcc-
Q psy74 17 NNVMYYVKERFLHRLDLTN-SKDSVVMQLRG----GGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESE- 90 (134)
Q Consensus 17 ~n~L~Yvkek~l~~~D~~t-~~~~~~~slrg----~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~- 90 (134)
++.|.-..++.|+.||+.+ .....++.++. ..-.+...+.++|....+|++.. ..|...++.+......
T Consensus 189 ~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~-----~dg~i~iwd~~~~~~~~ 263 (447)
T 3dw8_B 189 YETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSS-----SKGTIRLCDMRASALCD 263 (447)
T ss_dssp SSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEE-----TTSCEEEEETTTCSSSC
T ss_pred CCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEe-----CCCeEEEEECcCCcccc
Confidence 4445545899999999985 44444444431 13336789999999844444433 3456777765543210
Q ss_pred -cccccCCcc------------ccceeEEEEeCCe-EEEEecCCEEEEEeCCC
Q psy74 91 -RKEVADGKR------------STGISAVWVARNR-FAVLDRNHTILIKNLKN 129 (134)
Q Consensus 91 -~~~~~~~~~------------g~g~~AvFVaRNR-fAvldk~~~i~Iknl~n 129 (134)
....-+... +...+..|-...+ +|+-.. ++|.|-|+..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~ 315 (447)
T 3dw8_B 264 RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNM 315 (447)
T ss_dssp TTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTC
T ss_pred ceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCC
Confidence 011111111 1334455544444 444445 8999999864
No 101
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=69.38 E-value=48 Score=29.56 Aligned_cols=104 Identities=10% Similarity=0.140 Sum_probs=59.3
Q ss_pred CCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCccccccc
Q psy74 17 NNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVA 95 (134)
Q Consensus 17 ~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~~ 95 (134)
++.|.-. .++.|+.||+.+.+- +..+++ .-.+...+.+.|.....++.+. .+.|...++.+..... ...-
T Consensus 669 ~~~l~s~~~d~~v~vwd~~~~~~--~~~~~~-~~~~v~~~~~~~~~~~~~l~sg----~~d~~v~vwd~~~~~~--~~~~ 739 (1249)
T 3sfz_A 669 DSYIATCSADKKVKIWDSATGKL--VHTYDE-HSEQVNCCHFTNKSNHLLLATG----SNDFFLKLWDLNQKEC--RNTM 739 (1249)
T ss_dssp SSEEEEEETTSEEEEEETTTCCE--EEEEEC-CSSCEEEEEECSSSSCCEEEEE----ETTSCEEEEETTSSSE--EEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCce--EEEEcC-CCCcEEEEEEecCCCceEEEEE----eCCCeEEEEECCCcch--hhee
Confidence 4445444 789999999998643 334443 2235788999987554333333 2445666666543321 0011
Q ss_pred CCccccceeEEEEeCC-eEEEEecCCEEEEEeCCC
Q psy74 96 DGKRSTGISAVWVARN-RFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 96 ~~~~g~g~~AvFVaRN-RfAvldk~~~i~Iknl~n 129 (134)
.++.+...+..|-... .+|+-..+++|.|-|+..
T Consensus 740 ~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~ 774 (1249)
T 3sfz_A 740 FGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRS 774 (1249)
T ss_dssp CCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGG
T ss_pred cCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCC
Confidence 2334434445554433 466666688999988853
No 102
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=69.18 E-value=29 Score=28.24 Aligned_cols=67 Identities=9% Similarity=-0.032 Sum_probs=42.9
Q ss_pred CcceeeCCEEEEE-eC----CeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEcc
Q psy74 11 PAYTVHNNVMYYV-KE----RFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIP 85 (134)
Q Consensus 11 Pa~~~~~n~L~Yv-ke----k~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lp 85 (134)
|+++-.|..|+|. .+ ..|+.+|+.++.-. .|.+. .....++.+.|....+. .+. ..|.+.|+.+.
T Consensus 155 ~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~---~l~~~-~~~~~~~~~SpDG~~l~-~~~-----~~~~~~i~~~d 224 (582)
T 3o4h_A 155 FVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR---VFDSG-EGSFSSASISPGMKVTA-GLE-----TAREARLVTVD 224 (582)
T ss_dssp EEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE---EECCS-SCEEEEEEECTTSCEEE-EEE-----CSSCEEEEEEC
T ss_pred EEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce---EeecC-CCccccceECCCCCEEE-Ecc-----CCCeeEEEEEc
Confidence 4566678889887 45 67999999886543 34421 11347788888877666 333 34456777665
Q ss_pred CC
Q psy74 86 KE 87 (134)
Q Consensus 86 k~ 87 (134)
-+
T Consensus 225 ~~ 226 (582)
T 3o4h_A 225 PR 226 (582)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 103
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=68.15 E-value=40 Score=26.14 Aligned_cols=107 Identities=13% Similarity=0.242 Sum_probs=57.3
Q ss_pred eeeCCEEEEE-eCCeEEEEECCCCCceeeEEeec--CCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCc-
Q psy74 14 TVHNNVMYYV-KERFLHRLDLTNSKDSVVMQLRG--GGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEES- 89 (134)
Q Consensus 14 ~~~~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg--~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~- 89 (134)
+..++.|+-. .+..|+.||+.+.+ ++..+.+ ....+...+++++ ..|++.. +.|...++.+.....
T Consensus 326 ~~~~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~~~~~~~~v~~~~~~~---~~l~s~~-----~dg~v~iwd~~~~~~~ 395 (445)
T 2ovr_B 326 ELKDNILVSGNADSTVKIWDIKTGQ--CLQTLQGPNKHQSAVTCLQFNK---NFVITSS-----DDGTVKLWDLKTGEFI 395 (445)
T ss_dssp EEETTEEEEEETTSCEEEEETTTCC--EEEEECSTTSCSSCEEEEEECS---SEEEEEE-----TTSEEEEEETTTCCEE
T ss_pred EEeCCEEEEEeCCCeEEEEECCCCc--EEEEEccCCCCCCCEEEEEECC---CEEEEEe-----CCCeEEEEECCCCcee
Confidence 3455655544 78999999998744 3445552 2444678888875 2444433 445777776553321
Q ss_pred cccc--ccCCccccceeEEEEeCCeEEEE-ecCCE----EEEEeCCCc
Q psy74 90 ERKE--VADGKRSTGISAVWVARNRFAVL-DRNHT----ILIKNLKNE 130 (134)
Q Consensus 90 ~~~~--~~~~~~g~g~~AvFVaRNRfAvl-dk~~~----i~Iknl~n~ 130 (134)
.... ......+...+..|-...++++. ..+++ |.|-|++.+
T Consensus 396 ~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 396 RNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred eeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 1110 01122232333344333344333 33665 999998765
No 104
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=67.59 E-value=41 Score=26.10 Aligned_cols=102 Identities=16% Similarity=0.275 Sum_probs=57.6
Q ss_pred eCCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCcccccc
Q psy74 16 HNNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEV 94 (134)
Q Consensus 16 ~~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~ 94 (134)
+++.|+-. .++.|+.||+.+.........-.....+...++++. ..|++.. ++|...++.+..... ...
T Consensus 222 ~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~l~s~~-----~dg~i~vwd~~~~~~--~~~ 291 (435)
T 1p22_A 222 NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD---KYIVSAS-----GDRTIKVWNTSTCEF--VRT 291 (435)
T ss_dssp CTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEET---TEEEEEE-----TTSEEEEEETTTCCE--EEE
T ss_pred cCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCC---CEEEEEe-----CCCeEEEEECCcCcE--EEE
Confidence 45555555 899999999998665543333222334567777732 2344333 345666665543211 000
Q ss_pred cCCccccceeEEEEeCCeEEEEecCCEEEEEeCC
Q psy74 95 ADGKRSTGISAVWVARNRFAVLDRNHTILIKNLK 128 (134)
Q Consensus 95 ~~~~~g~g~~AvFVaRNRfAvldk~~~i~Iknl~ 128 (134)
-....+ +..++-+..+.+++-..+++|.|-|+.
T Consensus 292 ~~~~~~-~v~~~~~~~~~l~~g~~dg~i~iwd~~ 324 (435)
T 1p22_A 292 LNGHKR-GIACLQYRDRLVVSGSSDNTIRLWDIE 324 (435)
T ss_dssp EECCSS-CEEEEEEETTEEEEEETTSCEEEEETT
T ss_pred EcCCCC-cEEEEEeCCCEEEEEeCCCeEEEEECC
Confidence 112222 333444477788888888899999986
No 105
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=66.08 E-value=44 Score=25.87 Aligned_cols=102 Identities=9% Similarity=0.085 Sum_probs=61.5
Q ss_pred CCEEEEEeCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCcccccccC
Q psy74 17 NNVMYYVKERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVAD 96 (134)
Q Consensus 17 ~n~L~Yvkek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~~~ 96 (134)
+|.|----|+.|+.||..+++-..++.+.+ .-....+|.++|...-+++.+ ..|...+..+..... ...-.
T Consensus 116 ~n~lAvgld~tV~lWd~~tg~~~~~~~~~~-~~~~V~sv~fspdg~~lasgs------~Dg~v~iWd~~~~~~--~~~~~ 186 (420)
T 4gga_A 116 GNVLAVALDNSVYLWSASSGDILQLLQMEQ-PGEYISSVAWIKEGNYLAVGT------SSAEVQLWDVQQQKR--LRNMT 186 (420)
T ss_dssp TSEEEEEETTEEEEEETTTCCEEEEEECCS-TTCCEEEEEECTTSSEEEEEE------TTSCEEEEETTTTEE--EEEEC
T ss_pred CCEEEEEeCCEEEEEECCCCCEEEEEEecC-CCCcEEEEEECCCCCEEEEEE------CCCeEEEEEcCCCcE--EEEEe
Confidence 454443389999999999987777777763 222578999999877665543 345667765543311 00011
Q ss_pred CccccceeEEEEeCCeEEEEecCCEEEEEeCC
Q psy74 97 GKRSTGISAVWVARNRFAVLDRNHTILIKNLK 128 (134)
Q Consensus 97 ~~~g~g~~AvFVaRNRfAvldk~~~i~Iknl~ 128 (134)
...+ ...++-...+.++.-..++++.+.+..
T Consensus 187 ~h~~-~v~~~s~~~~~l~sgs~d~~i~~~d~~ 217 (420)
T 4gga_A 187 SHSA-RVGSLSWNSYILSSGSRSGHIHHHDVR 217 (420)
T ss_dssp CCSS-CEEEEEEETTEEEEEETTSEEEEEETT
T ss_pred CCCC-ceEEEeeCCCEEEEEeCCCceeEeeec
Confidence 2222 233344455666666667778777764
No 106
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=66.04 E-value=57 Score=27.15 Aligned_cols=69 Identities=13% Similarity=0.202 Sum_probs=45.6
Q ss_pred cceeeCCEEEEEe------CCeEEEEECCCCCceeeEEeecCCCC-CceEEEeccCCCeEEEEeccCCCCCCceEEEEEc
Q psy74 12 AYTVHNNVMYYVK------ERFLHRLDLTNSKDSVVMQLRGGGRI-PAHSISYNATEHSILVTTRNANNFENSTYDLYMI 84 (134)
Q Consensus 12 a~~~~~n~L~Yvk------ek~l~~~D~~t~~~~~~~slrg~~~~-~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~l 84 (134)
+| -.+..|++.. +..|+.+|+.+.....+..-.+..|. ....+.+.|... +|+... +.|...|+.+
T Consensus 293 ~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~-----~~g~~~l~~~ 365 (741)
T 2ecf_A 293 NW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGS-ILWSSE-----RTGFQHLYRI 365 (741)
T ss_dssp EE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSC-EEEEEC-----TTSSCEEEEE
T ss_pred Ee-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCe-EEEEec-----CCCccEEEEE
Confidence 44 5567788763 46799999998765555544444555 456788999877 555533 4567888877
Q ss_pred cCC
Q psy74 85 PKE 87 (134)
Q Consensus 85 pk~ 87 (134)
..+
T Consensus 366 ~~~ 368 (741)
T 2ecf_A 366 DSK 368 (741)
T ss_dssp CSS
T ss_pred cCC
Confidence 643
No 107
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=65.88 E-value=39 Score=25.25 Aligned_cols=114 Identities=8% Similarity=0.102 Sum_probs=58.8
Q ss_pred CCCC---cceeeCCEEEEEeC-----CeEEEEECCCC-Cc-eeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCc
Q psy74 8 RERP---AYTVHNNVMYYVKE-----RFLHRLDLTNS-KD-SVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENS 77 (134)
Q Consensus 8 RERP---a~~~~~n~L~Yvke-----k~l~~~D~~t~-~~-~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g 77 (134)
-++| +++-.+..||.+.+ ..++.|++... .. ..+-.+.. .-..|..++. ....++++. .++|
T Consensus 49 ~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~-~~~~p~~~~~--dg~~l~~~~-----~~~~ 120 (361)
T 3scy_A 49 VANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKT-MGADPCYLTT--NGKNIVTAN-----YSGG 120 (361)
T ss_dssp CSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEEC-SSSCEEEEEE--CSSEEEEEE-----TTTT
T ss_pred CCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEecc-CCCCcEEEEE--CCCEEEEEE-----CCCC
Confidence 4566 44444666777755 58999998863 22 23333331 2225677777 333444443 3556
Q ss_pred eEEEEEccCCCc-ccccc----------cCCcccc-ceeEEEEeCCe-EEEEec-CCEEEEEeCCC
Q psy74 78 TYDLYMIPKEES-ERKEV----------ADGKRST-GISAVWVARNR-FAVLDR-NHTILIKNLKN 129 (134)
Q Consensus 78 ~yeL~~lpk~~~-~~~~~----------~~~~~g~-g~~AvFVaRNR-fAvldk-~~~i~Iknl~n 129 (134)
...++.+..+.. ..... .+.+.+. ..+..|-.-.+ +++-+. +++|.|.+++.
T Consensus 121 ~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~ 186 (361)
T 3scy_A 121 SITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINP 186 (361)
T ss_dssp EEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred EEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcC
Confidence 777777653321 11100 0011111 13344444444 556666 78898888763
No 108
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=65.50 E-value=45 Score=25.80 Aligned_cols=102 Identities=10% Similarity=0.119 Sum_probs=63.4
Q ss_pred CCEEEEE----eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCcccc
Q psy74 17 NNVMYYV----KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERK 92 (134)
Q Consensus 17 ~n~L~Yv----kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~ 92 (134)
+..++.+ .|+.|+.||+.+... +..+.. -.+..++.+.|...-+++.+. ...|...++.++...- .
T Consensus 288 ~~~~la~~~gs~D~~I~iwd~~t~~~--~~~~~~--~~~v~~~~~~~~~~~lv~~sg----~~d~~I~iwd~~~~~~--v 357 (420)
T 4gga_A 288 QSNVLATGGGTSDRHIRIWNVCSGAC--LSAVDA--HSQVCSILWSPHYKELISGHG----FAQNQLVIWKYPTMAK--V 357 (420)
T ss_dssp CTTEEEEEECTTTCEEEEEETTTTEE--EEEEEC--SSCEEEEEEETTTTEEEEEEC----TTTCCEEEEETTTCCE--E
T ss_pred cccEEEEEeecCCCEEEEEeCCcccc--ceeecc--ccceeeeeecCCCCeEEEEEe----cCCCEEEEEECCCCcE--E
Confidence 4445554 589999999987543 333331 125678899999998888765 4456777776654321 0
Q ss_pred cccCCccccceeEEEEeC-CeEEEEecCCEEEEEeCC
Q psy74 93 EVADGKRSTGISAVWVAR-NRFAVLDRNHTILIKNLK 128 (134)
Q Consensus 93 ~~~~~~~g~g~~AvFVaR-NRfAvldk~~~i~Iknl~ 128 (134)
..-.++.+...+..|-.- +.+|.-..+++|.|=|+.
T Consensus 358 ~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~ 394 (420)
T 4gga_A 358 AELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF 394 (420)
T ss_dssp EEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred EEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 011244454455555432 456666668999998874
No 109
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=64.90 E-value=65 Score=27.40 Aligned_cols=115 Identities=12% Similarity=0.140 Sum_probs=61.9
Q ss_pred CCcceeeCCEEEEEe-C-------------CeEEEEECCCCCc--eeeEEeecCCCCCceEEEeccCCCeEEEEeccCCC
Q psy74 10 RPAYTVHNNVMYYVK-E-------------RFLHRLDLTNSKD--SVVMQLRGGGRIPAHSISYNATEHSILVTTRNANN 73 (134)
Q Consensus 10 RPa~~~~~n~L~Yvk-e-------------k~l~~~D~~t~~~--~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~ 73 (134)
-|+|+ .+..|||+. + .+|+.|++.+... ..+....+..-....++++.|...-+++...
T Consensus 179 ~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~---- 253 (693)
T 3iuj_A 179 GISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAA---- 253 (693)
T ss_dssp CCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEE----
T ss_pred cEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEc----
Confidence 57788 888999994 3 3499999998433 3333322200111346778888887777654
Q ss_pred CCCceEEEEEccCCCc-ccccccCCccccceeEEEEeCCeEEEEec----CCEEEEEeCCC
Q psy74 74 FENSTYDLYMIPKEES-ERKEVADGKRSTGISAVWVARNRFAVLDR----NHTILIKNLKN 129 (134)
Q Consensus 74 ~d~g~yeL~~lpk~~~-~~~~~~~~~~g~g~~AvFVaRNRfAvldk----~~~i~Iknl~n 129 (134)
.++..-+++.++-+.. +....-....+.-...++-...+|+++.. +..|.+-++++
T Consensus 254 ~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~ 314 (693)
T 3iuj_A 254 NSTSGNRLYVKDLSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAAN 314 (693)
T ss_dssp SSSSCCEEEEEETTSTTCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTS
T ss_pred cCCCCcEEEEEECCCCCCceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCC
Confidence 2322346666553321 11111111112112223344567777753 36788888764
No 110
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=64.83 E-value=59 Score=26.92 Aligned_cols=58 Identities=9% Similarity=-0.032 Sum_probs=38.3
Q ss_pred CcceeeCCEEEEEeCCeEEEEECCC-----CCceeeEEeecCCC-----------CCceEEEeccCCCeEEEEe
Q psy74 11 PAYTVHNNVMYYVKERFLHRLDLTN-----SKDSVVMQLRGGGR-----------IPAHSISYNATEHSILVTT 68 (134)
Q Consensus 11 Pa~~~~~n~L~Yvkek~l~~~D~~t-----~~~~~~~slrg~~~-----------~~~~slsyNpae~~vLv~~ 68 (134)
|+++-.+..|.|+.+..|+.||+.+ .....+........ ..++.+.++|....+++..
T Consensus 126 ~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~ 199 (706)
T 2z3z_A 126 LDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYR 199 (706)
T ss_dssp CEECTTSSEEEEEETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEE
T ss_pred CcCCCCCCEEEEEECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEE
Confidence 4555677889999999999999987 54332221111100 0147788999988777765
No 111
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=64.47 E-value=71 Score=28.46 Aligned_cols=101 Identities=12% Similarity=0.166 Sum_probs=64.0
Q ss_pred eCCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCcccccc
Q psy74 16 HNNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEV 94 (134)
Q Consensus 16 ~~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~ 94 (134)
.++.+... .+..|+.||+.+... +..+.| ...+.+.+.++|....++.. .+.|...++.+...... .
T Consensus 972 ~g~~l~~g~~~g~i~i~d~~~~~~--~~~~~~-h~~~v~~l~~s~dg~~l~s~------~~dg~i~vwd~~~~~~~---~ 1039 (1249)
T 3sfz_A 972 HLEYVAFGDEDGAIKIIELPNNRV--FSSGVG-HKKAVRHIQFTADGKTLISS------SEDSVIQVWNWQTGDYV---F 1039 (1249)
T ss_dssp TSSEEEEEETTSCCEEEETTTTSC--EEECCC-CSSCCCCEEECSSSSCEEEE------CSSSBEEEEETTTTEEE---C
T ss_pred CCCEEEEEcCCCCEEEEEcCCCce--eeeccc-CCCceEEEEECCCCCEEEEE------cCCCEEEEEECCCCceE---E
Confidence 44555555 788999999987543 233332 23367889999987765554 23456666665433111 1
Q ss_pred cCCccccceeEEEEeCCeEEEEecCCEEEEEeCC
Q psy74 95 ADGKRSTGISAVWVARNRFAVLDRNHTILIKNLK 128 (134)
Q Consensus 95 ~~~~~g~g~~AvFVaRNRfAvldk~~~i~Iknl~ 128 (134)
.....+...+..|....++++...+++|.|-|+.
T Consensus 1040 ~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~ 1073 (1249)
T 3sfz_A 1040 LQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVI 1073 (1249)
T ss_dssp CBCCSSCEEEEEECSSSEEEEEESSSEEEEEETT
T ss_pred EecCCCcEEEEEEcCCCcEEEEECCCcEEEEECC
Confidence 1233344556777777888888888899999985
No 112
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=64.31 E-value=43 Score=25.10 Aligned_cols=105 Identities=10% Similarity=0.121 Sum_probs=55.0
Q ss_pred CCEEEEE-eCCeEEEEECCC-CCc-eeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCccccc
Q psy74 17 NNVMYYV-KERFLHRLDLTN-SKD-SVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKE 93 (134)
Q Consensus 17 ~n~L~Yv-kek~l~~~D~~t-~~~-~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~ 93 (134)
++.|.-. .|+.|+.||+.. ... ..+..+++ .-.+...+.++|....++..+. | |+..+..+.........
T Consensus 119 g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~l~s~s~-----D-~~i~iW~~~~~~~~~~~ 191 (330)
T 2hes_X 119 GYYLATCSRDKSVWIWETDESGEEYECISVLQE-HSQDVKHVIWHPSEALLASSSY-----D-DTVRIWKDYDDDWECVA 191 (330)
T ss_dssp SCEEEEEETTSCEEEEECCTTCCCCEEEEEECC-CSSCEEEEEECSSSSEEEEEET-----T-SCEEEEEEETTEEEEEE
T ss_pred CCEEEEEeCCCEEEEEeccCCCCCeEEEEEecc-CCCceEEEEECCCCCEEEEEcC-----C-CeEEEEECCCCCeeEEE
Confidence 4445544 899999999954 322 34445553 2336789999998775544422 3 35555433221000000
Q ss_pred ccCCccccceeEEEEeC---CeEEEEecCCEEEEEeCC
Q psy74 94 VADGKRSTGISAVWVAR---NRFAVLDRNHTILIKNLK 128 (134)
Q Consensus 94 ~~~~~~g~g~~AvFVaR---NRfAvldk~~~i~Iknl~ 128 (134)
.-.++.+...+..|-.- .++|.-..+++|.|-++.
T Consensus 192 ~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~ 229 (330)
T 2hes_X 192 VLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYM 229 (330)
T ss_dssp EECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEE
T ss_pred EccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEec
Confidence 11233333333444332 245555557778877764
No 113
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=63.59 E-value=50 Score=25.59 Aligned_cols=100 Identities=11% Similarity=0.140 Sum_probs=53.2
Q ss_pred eeCCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCccccc
Q psy74 15 VHNNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKE 93 (134)
Q Consensus 15 ~~~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~ 93 (134)
.+++.|.-. .+..|+.||+.+.+. +..+++ ...+...++++. .. |++.. ++|...++.+..... ..
T Consensus 207 ~~~~~l~s~s~dg~i~~wd~~~~~~--~~~~~~-~~~~v~~~~~~~--~~-l~~~~-----~dg~i~iwd~~~~~~--~~ 273 (445)
T 2ovr_B 207 LHEKRVVSGSRDATLRVWDIETGQC--LHVLMG-HVAAVRCVQYDG--RR-VVSGA-----YDFMVKVWDPETETC--LH 273 (445)
T ss_dssp EETTEEEEEETTSEEEEEESSSCCE--EEEEEC-CSSCEEEEEECS--SC-EEEEE-----TTSCEEEEEGGGTEE--EE
T ss_pred ecCCEEEEEeCCCEEEEEECCCCcE--EEEEcC-CcccEEEEEECC--CE-EEEEc-----CCCEEEEEECCCCcE--eE
Confidence 355655555 888999999987543 333342 223567777732 22 33322 334555554432211 00
Q ss_pred ccCCccccceeEEEEeCCeEEEEecCCEEEEEeCC
Q psy74 94 VADGKRSTGISAVWVARNRFAVLDRNHTILIKNLK 128 (134)
Q Consensus 94 ~~~~~~g~g~~AvFVaRNRfAvldk~~~i~Iknl~ 128 (134)
.-....+...+..| ..+.+++-..+++|.|-|+.
T Consensus 274 ~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~i~d~~ 307 (445)
T 2ovr_B 274 TLQGHTNRVYSLQF-DGIHVVSGSLDTSIRVWDVE 307 (445)
T ss_dssp EECCCSSCEEEEEE-CSSEEEEEETTSCEEEEETT
T ss_pred EecCCCCceEEEEE-CCCEEEEEeCCCeEEEEECC
Confidence 11123333334444 66777777777788888875
No 114
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=63.42 E-value=48 Score=25.38 Aligned_cols=101 Identities=6% Similarity=0.018 Sum_probs=55.6
Q ss_pred eCCeEEEEECCCCCceeeEEeec----CCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCc-ccc-cccCC
Q psy74 24 KERFLHRLDLTNSKDSVVMQLRG----GGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEES-ERK-EVADG 97 (134)
Q Consensus 24 kek~l~~~D~~t~~~~~~~slrg----~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~-~~~-~~~~~ 97 (134)
.|+.|+.||+.+......+.... .......++.++|....++..+ ++|...++.+..... ... .....
T Consensus 269 ~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~------~dg~i~vwd~~~~~~~~~~~~~~~~ 342 (380)
T 3iz6_a 269 DDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGY------SNGDCYVWDTLLAEMVLNLGTLQNS 342 (380)
T ss_dssp SSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEEC------TTSCEEEEETTTCCEEEEECCSCSS
T ss_pred CCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEE------CCCCEEEEECCCCceEEEEecccCC
Confidence 89999999999865444333321 1222367899999887666653 344555554332211 000 00123
Q ss_pred ccccceeEEEEeCCe-EEEEecCCEEEEEeCCCc
Q psy74 98 KRSTGISAVWVARNR-FAVLDRNHTILIKNLKNE 130 (134)
Q Consensus 98 ~~g~g~~AvFVaRNR-fAvldk~~~i~Iknl~n~ 130 (134)
+.+.-.+..|-.-.+ +|.=..+++|.|-++++.
T Consensus 343 h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 343 HEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp CCCCCCEEEECSSSSEEEEECTTSCEEEEECCSS
T ss_pred CCCceEEEEECCCCCEEEEeeCCCCEEEEecCCC
Confidence 344333444433333 444445889999998753
No 115
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=63.07 E-value=66 Score=26.83 Aligned_cols=99 Identities=9% Similarity=0.014 Sum_probs=60.7
Q ss_pred eCCeEEEEECCCCCceee--EEeecCCCCCceEEEeccC-----CCeEEEEeccCCCCCCceEEEEEccCCCcc-----c
Q psy74 24 KERFLHRLDLTNSKDSVV--MQLRGGGRIPAHSISYNAT-----EHSILVTTRNANNFENSTYDLYMIPKEESE-----R 91 (134)
Q Consensus 24 kek~l~~~D~~t~~~~~~--~slrg~~~~~~~slsyNpa-----e~~vLv~~~~~~~~d~g~yeL~~lpk~~~~-----~ 91 (134)
.++.|+.||+.+...... ..+.+ ..-.+..|.++|. +..+|++.. ..|+--|..++..... .
T Consensus 181 ~D~tI~iWd~~~~~~~~~~~~~l~~-~~~~V~~v~wsp~~~~~~~~~~LAs~s-----~DgtvrlWd~~~~~~~~~~~~~ 254 (524)
T 2j04_B 181 HSSCIQIFKMNTSTLHCVKVQTIVH-SFGEVWDLKWHEGCHAPHLVGCLSFVS-----QEGTINFLEIIDNATDVHVFKM 254 (524)
T ss_dssp -CEEEEEEEEETTTCCEEEEEEEEE-CCCSEEEEEECSSCCCSSSSCEEEEEE-----TTSCEEEEECCCCSSSSSEEEC
T ss_pred CCceEEEEEccCCCCCceEEEEEEe-cCCcEEEEEECCCCCCCCCCceEEEEe-----cCCeEEEEEcCCCcccccccee
Confidence 567899999987543221 22332 2336789999996 235666544 3457777777644211 0
Q ss_pred cc----ccCCccccceeEEEEeCCeEEEEecCCEEEEEeCC
Q psy74 92 KE----VADGKRSTGISAVWVARNRFAVLDRNHTILIKNLK 128 (134)
Q Consensus 92 ~~----~~~~~~g~g~~AvFVaRNRfAvldk~~~i~Iknl~ 128 (134)
.. .-....+...+..|-.-+++|+=..+++|.|-|++
T Consensus 255 ~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~ 295 (524)
T 2j04_B 255 CEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEFDLT 295 (524)
T ss_dssp CCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEEEEEETT
T ss_pred ecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEEEECC
Confidence 00 01234456677788776777777778999999996
No 116
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=63.04 E-value=40 Score=24.38 Aligned_cols=102 Identities=7% Similarity=0.102 Sum_probs=56.6
Q ss_pred CEEEEEeCCeEEEEECCCCCc-----eeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCcccc
Q psy74 18 NVMYYVKERFLHRLDLTNSKD-----SVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERK 92 (134)
Q Consensus 18 n~L~Yvkek~l~~~D~~t~~~-----~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~ 92 (134)
..|+|.....|+.+|+..... .++++.- ...|..+.++|.+..+.++.. .++....+ ..+.....
T Consensus 2 ~~l~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~---~~~~~gi~~d~~~~~ly~~d~-----~~~~I~~~--~~~g~~~~ 71 (267)
T 1npe_A 2 THLLFAQTGKIERLPLERNTMKKTEAKAFLHIP---AKVIIGLAFDCVDKVVYWTDI-----SEPSIGRA--SLHGGEPT 71 (267)
T ss_dssp EEEEEEEEEEEEEEEESSSCBCGGGCEEEEEEE---EEEEEEEEEETTTTEEEEEET-----TTTEEEEE--ESSSCCCE
T ss_pred cEEEEEcCCeEEEEEecCcccccccceeeecCC---CCcEEEEEEecCCCEEEEEEC-----CCCEEEEE--ecCCCCcE
Confidence 468888777899999987432 2333322 114788999998888877643 23333333 22211100
Q ss_pred cccCCccccceeEEEEe--CCeEEEEec-CCEEEEEeCCCc
Q psy74 93 EVADGKRSTGISAVWVA--RNRFAVLDR-NHTILIKNLKNE 130 (134)
Q Consensus 93 ~~~~~~~g~g~~AvFVa--RNRfAvldk-~~~i~Iknl~n~ 130 (134)
..... ...+-.++-+. .+++.+.|. ++.|.+-+++++
T Consensus 72 ~~~~~-~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~ 111 (267)
T 1npe_A 72 TIIRQ-DLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGT 111 (267)
T ss_dssp EEECT-TCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEEEC-CCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCC
Confidence 00000 11233344454 356777776 778888887654
No 117
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=63.02 E-value=46 Score=25.01 Aligned_cols=103 Identities=10% Similarity=0.086 Sum_probs=59.1
Q ss_pred eCCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCcccccc
Q psy74 16 HNNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEV 94 (134)
Q Consensus 16 ~~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~ 94 (134)
.++.|... .+..++.||+.+.+.. ..+.+ .-....++.++|....++..+ .+|...++.+..... ...
T Consensus 133 dg~~l~~g~~dg~v~i~~~~~~~~~--~~~~~-~~~~v~~~~~spdg~~lasg~------~dg~i~iwd~~~~~~--~~~ 201 (321)
T 3ow8_A 133 DSQYLATGTHVGKVNIFGVESGKKE--YSLDT-RGKFILSIAYSPDGKYLASGA------IDGIINIFDIATGKL--LHT 201 (321)
T ss_dssp TSSEEEEECTTSEEEEEETTTCSEE--EEEEC-SSSCEEEEEECTTSSEEEEEE------TTSCEEEEETTTTEE--EEE
T ss_pred CCCEEEEEcCCCcEEEEEcCCCcee--EEecC-CCceEEEEEECCCCCEEEEEc------CCCeEEEEECCCCcE--EEE
Confidence 34556555 7899999999885543 33332 112568899999887666553 334666665543211 001
Q ss_pred cCCccccceeEEEEeCC-eEEEEecCCEEEEEeCCC
Q psy74 95 ADGKRSTGISAVWVARN-RFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 95 ~~~~~g~g~~AvFVaRN-RfAvldk~~~i~Iknl~n 129 (134)
-+...+...+..|-.-. .+|.-..+++|.|-|++.
T Consensus 202 ~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~ 237 (321)
T 3ow8_A 202 LEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH 237 (321)
T ss_dssp ECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTT
T ss_pred EcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCC
Confidence 12233333444554333 455555588899998863
No 118
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=63.02 E-value=50 Score=25.42 Aligned_cols=101 Identities=12% Similarity=0.178 Sum_probs=56.1
Q ss_pred eCCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCcccccc
Q psy74 16 HNNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEV 94 (134)
Q Consensus 16 ~~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~ 94 (134)
.+..|.-. .|+.|+.||+.+.+ .+..++| .-.+..++.++|....++..+ ..|+.-+..+..... ..
T Consensus 134 dg~~l~s~~~d~~i~iwd~~~~~--~~~~~~~-h~~~v~~~~~~p~~~~l~s~s------~d~~v~iwd~~~~~~---~~ 201 (393)
T 1erj_A 134 DGKFLATGAEDRLIRIWDIENRK--IVMILQG-HEQDIYSLDYFPSGDKLVSGS------GDRTVRIWDLRTGQC---SL 201 (393)
T ss_dssp TSSEEEEEETTSCEEEEETTTTE--EEEEECC-CSSCEEEEEECTTSSEEEEEE------TTSEEEEEETTTTEE---EE
T ss_pred CCCEEEEEcCCCeEEEEECCCCc--EEEEEcc-CCCCEEEEEEcCCCCEEEEec------CCCcEEEEECCCCee---EE
Confidence 34455554 89999999998753 3344553 233678999999887655443 334566655432211 00
Q ss_pred cCCccccceeEEEEe--CCeEEEEecCCEEEEEeCC
Q psy74 95 ADGKRSTGISAVWVA--RNRFAVLDRNHTILIKNLK 128 (134)
Q Consensus 95 ~~~~~g~g~~AvFVa--RNRfAvldk~~~i~Iknl~ 128 (134)
.-...+...+..|-. .+.+|+-..+++|.|-|+.
T Consensus 202 ~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~ 237 (393)
T 1erj_A 202 TLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSE 237 (393)
T ss_dssp EEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETT
T ss_pred EEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECC
Confidence 001111123333432 2455555557888888875
No 119
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=62.67 E-value=66 Score=26.75 Aligned_cols=57 Identities=9% Similarity=0.192 Sum_probs=38.2
Q ss_pred CcceeeCCEEEEEe--CC-----eEEEEECCCCCceeeEEeecCC------------C---------CCceEEEeccCCC
Q psy74 11 PAYTVHNNVMYYVK--ER-----FLHRLDLTNSKDSVVMQLRGGG------------R---------IPAHSISYNATEH 62 (134)
Q Consensus 11 Pa~~~~~n~L~Yvk--ek-----~l~~~D~~t~~~~~~~slrg~~------------~---------~~~~slsyNpae~ 62 (134)
|++.-.|..|+|+. +. .|+.||+.+.+...+....+.. . .....+++.|...
T Consensus 42 ~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~ 121 (741)
T 2ecf_A 42 PKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQ 121 (741)
T ss_dssp EEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSS
T ss_pred ceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCC
Confidence 34555678899984 66 8999999987655555443211 0 1246788889888
Q ss_pred eEEEE
Q psy74 63 SILVT 67 (134)
Q Consensus 63 ~vLv~ 67 (134)
.+++.
T Consensus 122 ~l~~~ 126 (741)
T 2ecf_A 122 RLLFP 126 (741)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77776
No 120
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=61.86 E-value=42 Score=24.17 Aligned_cols=47 Identities=11% Similarity=0.113 Sum_probs=31.1
Q ss_pred eCCEEEEEeCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEE
Q psy74 16 HNNVMYYVKERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVT 67 (134)
Q Consensus 16 ~~n~L~Yvkek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~ 67 (134)
.++.||.. +..|+.||+.+.+....+.. + ..+..+.+.|...-+++.
T Consensus 251 dg~~l~~~-~~~v~~~d~~~~~~~~~~~~-~---~~~~~~~~s~dg~~l~~~ 297 (337)
T 1pby_B 251 AKTRAFGA-YNVLESFDLEKNASIKRVPL-P---HSYYSVNVSTDGSTVWLG 297 (337)
T ss_dssp TSSEEEEE-ESEEEEEETTTTEEEEEEEC-S---SCCCEEEECTTSCEEEEE
T ss_pred CCCEEEEe-CCeEEEEECCCCcCcceecC-C---CceeeEEECCCCCEEEEE
Confidence 34455555 89999999987554333332 2 146789999988766665
No 121
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=61.81 E-value=41 Score=24.05 Aligned_cols=107 Identities=8% Similarity=0.096 Sum_probs=57.3
Q ss_pred eCCEEEEE-eCCeEEEEECCCCCce-eeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCccccc
Q psy74 16 HNNVMYYV-KERFLHRLDLTNSKDS-VVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKE 93 (134)
Q Consensus 16 ~~n~L~Yv-kek~l~~~D~~t~~~~-~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~ 93 (134)
.++.|.-. .|+.|+.||+.+.+.. ...........+...+.+.|....++..... ...+...+..+.......
T Consensus 161 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---~~~~~i~lwd~~~~~~~~-- 235 (318)
T 4ggc_A 161 DGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGG---TSDRHIRIWNVCSGACLS-- 235 (318)
T ss_dssp TSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEEC---TTTCEEEEEETTTCCEEE--
T ss_pred CCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEec---CCCCEEEEEecccccccc--
Confidence 34445555 8899999999984432 2211112223356778888877765554321 345566666544332211
Q ss_pred ccCCccccceeEEEEeCCeEEEEe---cCCEEEEEeCC
Q psy74 94 VADGKRSTGISAVWVARNRFAVLD---RNHTILIKNLK 128 (134)
Q Consensus 94 ~~~~~~g~g~~AvFVaRNRfAvld---k~~~i~Iknl~ 128 (134)
............|....+..++- .+++|.|-|++
T Consensus 236 -~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~ 272 (318)
T 4ggc_A 236 -AVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYP 272 (318)
T ss_dssp -EEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETT
T ss_pred -cccceeeeeeeeecccccceEEEEEcCCCEEEEEECC
Confidence 11222234556666655554442 35778888774
No 122
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=61.40 E-value=49 Score=24.79 Aligned_cols=53 Identities=19% Similarity=0.273 Sum_probs=35.4
Q ss_pred eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEcc
Q psy74 24 KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIP 85 (134)
Q Consensus 24 kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lp 85 (134)
.|+.|+.||+.+.+ .+..+.| .-.+..++.++|....++..+. | |..-+..+.
T Consensus 96 ~D~~v~lwd~~~~~--~~~~~~~-h~~~v~~v~~sp~~~~l~s~~~-----d-~~i~~wd~~ 148 (343)
T 2xzm_R 96 WDKTLRLWDLRTGT--TYKRFVG-HQSEVYSVAFSPDNRQILSAGA-----E-REIKLWNIL 148 (343)
T ss_dssp TTSEEEEEETTSSC--EEEEEEC-CCSCEEEEEECSSTTEEEEEET-----T-SCEEEEESS
T ss_pred CCCcEEEEECCCCc--EEEEEcC-CCCcEEEEEECCCCCEEEEEcC-----C-CEEEEEecc
Confidence 79999999998854 3344543 2336789999998876655432 3 456666543
No 123
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=61.33 E-value=49 Score=24.74 Aligned_cols=101 Identities=6% Similarity=0.055 Sum_probs=56.1
Q ss_pred EEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCcccccccCC
Q psy74 19 VMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVADG 97 (134)
Q Consensus 19 ~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~~~~ 97 (134)
.|.-. .|+.|+.||+.+.+. +....+..-.+...+.++|....+... ..+|...++.+.....-. ..-+.
T Consensus 141 ~l~s~s~dg~i~~wd~~~~~~--~~~~~~~~~~~i~~~~~~pdg~~lasg------~~dg~i~iwd~~~~~~~~-~~~~~ 211 (343)
T 3lrv_A 141 YFIWADNRGTIGFQSYEDDSQ--YIVHSAKSDVEYSSGVLHKDSLLLALY------SPDGILDVYNLSSPDQAS-SRFPV 211 (343)
T ss_dssp EEEEEETTCCEEEEESSSSCE--EEEECCCSSCCCCEEEECTTSCEEEEE------CTTSCEEEEESSCTTSCC-EECCC
T ss_pred EEEEEeCCCcEEEEECCCCcE--EEEEecCCCCceEEEEECCCCCEEEEE------cCCCEEEEEECCCCCCCc-cEEec
Confidence 33334 899999999997554 222223344457899999976544443 244577777655332110 01112
Q ss_pred -ccccceeEEEEeCCe-EEEEecCCEEEEEeCCC
Q psy74 98 -KRSTGISAVWVARNR-FAVLDRNHTILIKNLKN 129 (134)
Q Consensus 98 -~~g~g~~AvFVaRNR-fAvldk~~~i~Iknl~n 129 (134)
+.+...+..|-.-.+ +|.-. .++|.|-|+..
T Consensus 212 ~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~ 244 (343)
T 3lrv_A 212 DEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRK 244 (343)
T ss_dssp CTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTS
T ss_pred cCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCC
Confidence 344344444443333 44444 45899988853
No 124
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=61.09 E-value=40 Score=27.70 Aligned_cols=112 Identities=12% Similarity=0.100 Sum_probs=58.0
Q ss_pred cceeeCCEEEEEeC-----------CeEEEEECCC------CCceeeEEee-cCCCCCceEEEeccCCCeEEEEeccCCC
Q psy74 12 AYTVHNNVMYYVKE-----------RFLHRLDLTN------SKDSVVMQLR-GGGRIPAHSISYNATEHSILVTTRNANN 73 (134)
Q Consensus 12 a~~~~~n~L~Yvke-----------k~l~~~D~~t------~~~~~~~slr-g~~~~~~~slsyNpae~~vLv~~~~~~~ 73 (134)
+|+-.+..|+|+.+ ..|+.+|+.+ +... .|. +.. .....+++.|...-+++.......
T Consensus 136 ~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~l~~~~~-~~~~~~~~SpDG~~la~~~~~~~~ 211 (662)
T 3azo_A 136 VLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR---ELSDDAH-RFVTGPRLSPDGRQAVWLAWDHPR 211 (662)
T ss_dssp EEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE---ESSCSCS-SEECCCEECTTSSEEEEEEECTTC
T ss_pred EECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee---EEEecCC-CcccCceECCCCCEEEEEECCCCC
Confidence 44456788999843 4899999987 3322 222 111 134556788888777666531000
Q ss_pred CCCceEEEEEccCCCcc---cccc-cCCccccceeEEEEeCCeEEEEec-CC--EEEEEeC
Q psy74 74 FENSTYDLYMIPKEESE---RKEV-ADGKRSTGISAVWVARNRFAVLDR-NH--TILIKNL 127 (134)
Q Consensus 74 ~d~g~yeL~~lpk~~~~---~~~~-~~~~~g~g~~AvFVaRNRfAvldk-~~--~i~Iknl 127 (134)
..-+..+|+.++-+.++ .... .....+.-.+..|-.-.++++... ++ +|-+-++
T Consensus 212 ~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~ 272 (662)
T 3azo_A 212 MPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDP 272 (662)
T ss_dssp CTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECT
T ss_pred CCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEEC
Confidence 00023566665544222 2111 111123334456665566666654 44 5666666
No 125
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=60.84 E-value=44 Score=24.11 Aligned_cols=65 Identities=9% Similarity=0.154 Sum_probs=41.5
Q ss_pred eCCEEEEE--eCCeEEEEECCC-CCceeeE--EeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEcc
Q psy74 16 HNNVMYYV--KERFLHRLDLTN-SKDSVVM--QLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIP 85 (134)
Q Consensus 16 ~~n~L~Yv--kek~l~~~D~~t-~~~~~~~--slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lp 85 (134)
.++.||.. .+..|+.||+.+ .+-..+. .+....-..|+.+.+.|....++++.. ..+...++.+.
T Consensus 139 dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~-----~~~~i~~~~~~ 208 (343)
T 1ri6_A 139 DNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNE-----LNSSVDVWELK 208 (343)
T ss_dssp TSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEET-----TTTEEEEEESS
T ss_pred CCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeC-----CCCEEEEEEec
Confidence 34566655 578999999987 4433333 333212236889999999887777643 34466666553
No 126
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=60.49 E-value=50 Score=24.59 Aligned_cols=101 Identities=11% Similarity=0.100 Sum_probs=56.0
Q ss_pred CCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCccccccc
Q psy74 17 NNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVA 95 (134)
Q Consensus 17 ~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~~ 95 (134)
+..|+=. .|+.|+.||+.+.+ .+..+.| ...+..++.++|....++..+ ..|+..+..+...... .-
T Consensus 77 g~~l~s~s~D~~v~~wd~~~~~--~~~~~~~-h~~~v~~~~~~~~~~~l~s~s------~D~~i~vwd~~~~~~~---~~ 144 (319)
T 3frx_A 77 GAYALSASWDKTLRLWDVATGE--TYQRFVG-HKSDVMSVDIDKKASMIISGS------RDKTIKVWTIKGQCLA---TL 144 (319)
T ss_dssp SSEEEEEETTSEEEEEETTTTE--EEEEEEC-CSSCEEEEEECTTSCEEEEEE------TTSCEEEEETTSCEEE---EE
T ss_pred CCEEEEEeCCCEEEEEECCCCC--eeEEEcc-CCCcEEEEEEcCCCCEEEEEe------CCCeEEEEECCCCeEE---EE
Confidence 3444444 89999999998754 3344443 334678999999776655543 3346666655322110 01
Q ss_pred CCccccceeEEEEeC-------CeEEEEecCCEEEEEeCCC
Q psy74 96 DGKRSTGISAVWVAR-------NRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 96 ~~~~g~g~~AvFVaR-------NRfAvldk~~~i~Iknl~n 129 (134)
....+...+..|... ..++.-..+++|.|-|++.
T Consensus 145 ~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~ 185 (319)
T 3frx_A 145 LGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQ 185 (319)
T ss_dssp CCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTT
T ss_pred eccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCc
Confidence 122222222333321 2456555677888888753
No 127
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=60.30 E-value=57 Score=25.20 Aligned_cols=101 Identities=16% Similarity=0.175 Sum_probs=57.2
Q ss_pred EEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCc-cccc----
Q psy74 20 MYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEES-ERKE---- 93 (134)
Q Consensus 20 L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~-~~~~---- 93 (134)
|.=. .|+.+|.||+.+.. ++..+.+ ...+..++.++|.+...|++.. ..|+..++.+..... ....
T Consensus 159 las~s~D~tv~~Wd~~~~~--~~~~~~~-~~~~v~~v~~~p~~~~~l~~~~-----~d~~v~~wd~~t~~~~~~~~~~~~ 230 (393)
T 4gq1_A 159 IASVGDDCTLIIWRLTDEG--PILAGYP-LSSPGISVQFRPSNPNQLIVGE-----RNGNIRIFDWTLNLSAEENSQTEL 230 (393)
T ss_dssp EEEEETTSEEEEEEEETTE--EEEEEEE-CSSCEEEEEEETTEEEEEEEEE-----TTSEEEEEETTCCC----------
T ss_pred EEEEECCCeEEEEECCCCc--eeeeecC-CCCCcEEEEECCCCCceEEecC-----CCCEEEEEECCCCcccccccccCC
Confidence 3334 89999999998643 3333432 1226789999999876666544 345666665432211 0000
Q ss_pred ------------------ccCCccccceeEEEEeC--CeEEEEecCCEEEEEeCC
Q psy74 94 ------------------VADGKRSTGISAVWVAR--NRFAVLDRNHTILIKNLK 128 (134)
Q Consensus 94 ------------------~~~~~~g~g~~AvFVaR--NRfAvldk~~~i~Iknl~ 128 (134)
......+.-.+..|..+ .+++....++++.|-|+.
T Consensus 231 ~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~ 285 (393)
T 4gq1_A 231 VKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLF 285 (393)
T ss_dssp CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-
T ss_pred cccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECc
Confidence 01122223345566654 567777778889988874
No 128
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=60.23 E-value=47 Score=24.20 Aligned_cols=52 Identities=12% Similarity=0.004 Sum_probs=34.6
Q ss_pred eeeCCEEEEE--eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEec
Q psy74 14 TVHNNVMYYV--KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTR 69 (134)
Q Consensus 14 ~~~~n~L~Yv--kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~ 69 (134)
...++.+|-. .+..|+.||..+.+-...+.+. ..++ .+.++|...-++++..
T Consensus 6 ~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~---~~~~-~~~~s~dg~~l~~~~~ 59 (331)
T 3u4y_A 6 QTTSNFGIVVEQHLRRISFFSTDTLEILNQITLG---YDFV-DTAITSDCSNVVVTSD 59 (331)
T ss_dssp -CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECC---CCEE-EEEECSSSCEEEEEES
T ss_pred cCCCCEEEEEecCCCeEEEEeCcccceeeeEEcc---CCcc-eEEEcCCCCEEEEEeC
Confidence 3345556655 6789999999986554444432 2245 8999999887777654
No 129
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=59.56 E-value=54 Score=24.66 Aligned_cols=108 Identities=13% Similarity=0.168 Sum_probs=58.4
Q ss_pred CEEEEE--eCCeEEEEECCCCCceeeEEee-----c---CCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCC
Q psy74 18 NVMYYV--KERFLHRLDLTNSKDSVVMQLR-----G---GGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKE 87 (134)
Q Consensus 18 n~L~Yv--kek~l~~~D~~t~~~~~~~slr-----g---~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~ 87 (134)
+.||.. .+..|+.||..... ..+..+- | .....|..|.++|.+..++|+.. ..++....+ ..+
T Consensus 102 g~l~v~d~~~~~v~~~~~~g~~-~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~----~~~~~I~~~--~~~ 174 (329)
T 3fvz_A 102 GNYWVTDVALHQVFKLDPHSKE-GPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDG----YCNSRIVQF--SPS 174 (329)
T ss_dssp SCEEEEETTTTEEEEECTTCSS-CCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEEC----SSCCEEEEE--CTT
T ss_pred CCEEEEECCCCEEEEEeCCCCe-EEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeC----CCCCeEEEE--cCC
Confidence 446555 45789999976432 2344442 1 23446899999997777777632 123333333 222
Q ss_pred Cc--cccc-ccC-----CccccceeEEEEeC--CeEEEEec-CCEEEEEeCC-CceE
Q psy74 88 ES--ERKE-VAD-----GKRSTGISAVWVAR--NRFAVLDR-NHTILIKNLK-NEFC 132 (134)
Q Consensus 88 ~~--~~~~-~~~-----~~~g~g~~AvFVaR--NRfAvldk-~~~i~Iknl~-n~~~ 132 (134)
.. .... ... ...-..-.++-+.. .++.|-|. ++.|.+-+++ ++..
T Consensus 175 g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~ 231 (329)
T 3fvz_A 175 GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFV 231 (329)
T ss_dssp SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE
T ss_pred CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEE
Confidence 11 0000 000 00111244556654 57888887 8889988887 5543
No 130
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=59.51 E-value=35 Score=24.87 Aligned_cols=49 Identities=10% Similarity=0.074 Sum_probs=32.9
Q ss_pred CCCcceeeCCEEEEE--eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCC
Q psy74 9 ERPAYTVHNNVMYYV--KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEH 62 (134)
Q Consensus 9 ERPa~~~~~n~L~Yv--kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~ 62 (134)
|-|+|+-.++.||++ .+..|+.||..+. .. .+.. .-..|..|.+.|...
T Consensus 31 eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~--~~~~-~~~~~~~l~~~~dg~ 81 (296)
T 3e5z_A 31 EGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LS--PEMH-PSHHQNGHCLNKQGH 81 (296)
T ss_dssp EEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EE--EEES-SCSSEEEEEECTTCC
T ss_pred cCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eE--EEEC-CCCCcceeeECCCCc
Confidence 557787788889998 6789999998875 22 2221 112467777777554
No 131
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=58.40 E-value=91 Score=27.91 Aligned_cols=104 Identities=10% Similarity=0.161 Sum_probs=59.2
Q ss_pred EEEEEeCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCc-cccc---c
Q psy74 19 VMYYVKERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEES-ERKE---V 94 (134)
Q Consensus 19 ~L~Yvkek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~-~~~~---~ 94 (134)
.|+|.....|+..++.......++. ....+..|.|.+.+..|.++.. .++....+.+-.... +... .
T Consensus 397 ~Ll~an~~~Ir~i~l~~~~~~~l~~----~~~~~~gl~~d~~~~~lY~sD~-----~~~~I~~~~l~g~~~~~~~~~vi~ 467 (791)
T 3m0c_C 397 YLFFTNRHEVRKMTLDRSEYTSLIP----NLRNVVALDTEVASNRIYWSDL-----SQRMICSTQLDRAHGVSSYDTVIS 467 (791)
T ss_dssp EEEEECBSSEEEECTTSCCCEEEEC----SCSSEEEEEEETTTTEEEEEET-----TTTEEEEEEC--------CEEEEC
T ss_pred ccccccccceeEeeccCCcceeeec----CCCceEEEeecccCCeeEEeec-----cceeEEEEeccCCCCCcceeEEEe
Confidence 5788888999999998754444332 1235788999998888777644 222222222211100 0111 0
Q ss_pred cCCccccceeEEEEeCCeEEEEec-CCEEEEEeCCCceE
Q psy74 95 ADGKRSTGISAVWVARNRFAVLDR-NHTILIKNLKNEFC 132 (134)
Q Consensus 95 ~~~~~g~g~~AvFVaRNRfAvldk-~~~i~Iknl~n~~~ 132 (134)
.....-.|++.=|++|| +-+-|. +++|.+-++++...
T Consensus 468 ~~l~~P~GLAvD~~~~~-LY~tD~~~~~I~v~~ldG~~~ 505 (791)
T 3m0c_C 468 RDIQAPDGLAVDWIHSN-IYWTDSVLGTVSVADTKGVKR 505 (791)
T ss_dssp SSCSCCCEEEEETTTTE-EEEEETTTTEEEEEETTSSSE
T ss_pred cCCCCcceeeeeecCCc-EEEEecCCCeEEEEeCCCCeE
Confidence 11222356766677665 445566 88899888876544
No 132
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=58.31 E-value=55 Score=24.36 Aligned_cols=103 Identities=17% Similarity=0.181 Sum_probs=59.0
Q ss_pred EEEE-E-eCCeEEEEECCCCCc---eeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCccccc
Q psy74 19 VMYY-V-KERFLHRLDLTNSKD---SVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKE 93 (134)
Q Consensus 19 ~L~Y-v-kek~l~~~D~~t~~~---~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~ 93 (134)
.++. . .|+.|+.||+.+... .++..++| .-.+...+.++|...-++..+ ..|+-.+..+..... ..
T Consensus 31 ~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~-h~~~v~~~~~s~dg~~l~s~s------~D~~v~~wd~~~~~~--~~ 101 (319)
T 3frx_A 31 NLLLSASRDKTLISWKLTGDDQKFGVPVRSFKG-HSHIVQDCTLTADGAYALSAS------WDKTLRLWDVATGET--YQ 101 (319)
T ss_dssp TEEEEEETTSEEEEEEEEEETTEEEEEEEEEEC-CSSCEEEEEECTTSSEEEEEE------TTSEEEEEETTTTEE--EE
T ss_pred cEEEEecCCccEEEecCCCCCccccccceEEeC-CcccEEEEEECCCCCEEEEEe------CCCEEEEEECCCCCe--eE
Confidence 3444 3 899999999986332 34555554 334678899998776555443 334666665543211 00
Q ss_pred ccCCccccceeEEEEeCCe-EEEEecCCEEEEEeCCCc
Q psy74 94 VADGKRSTGISAVWVARNR-FAVLDRNHTILIKNLKNE 130 (134)
Q Consensus 94 ~~~~~~g~g~~AvFVaRNR-fAvldk~~~i~Iknl~n~ 130 (134)
.-..+.+...+..|-...+ +|.-..+++|.|-+++++
T Consensus 102 ~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~ 139 (319)
T 3frx_A 102 RFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ 139 (319)
T ss_dssp EEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC
T ss_pred EEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 1123333344444544433 455555788888888654
No 133
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=56.92 E-value=59 Score=24.31 Aligned_cols=110 Identities=9% Similarity=0.204 Sum_probs=60.0
Q ss_pred ceeeCCEEEEE-eCCeEEEEECCCCCceeeEEee-cCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCcc
Q psy74 13 YTVHNNVMYYV-KERFLHRLDLTNSKDSVVMQLR-GGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESE 90 (134)
Q Consensus 13 ~~~~~n~L~Yv-kek~l~~~D~~t~~~~~~~slr-g~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~ 90 (134)
++.+++.|.-. .|+.|+.||+.+.....+..+. +..-.+.+++.++|....++..+ ..|+-.|..+......
T Consensus 20 ~~~s~~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s------~D~~v~iw~~~~~~~~ 93 (330)
T 2hes_X 20 FDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGS------FDSTVSIWAKEESADR 93 (330)
T ss_dssp EEEETTEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEE------TTSCEEEEEC------
T ss_pred eccCCCEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEe------CCCcEEEEEcccCcCc
Confidence 34456634333 8999999999875433444453 43555789999999876544442 3345666654321110
Q ss_pred --ccc---ccCCccccceeEEEEe-CCeEEEEecCCEEEEEeCC
Q psy74 91 --RKE---VADGKRSTGISAVWVA-RNRFAVLDRNHTILIKNLK 128 (134)
Q Consensus 91 --~~~---~~~~~~g~g~~AvFVa-RNRfAvldk~~~i~Iknl~ 128 (134)
..+ .-.++.+...+..|-. .+.+|.-..+++|.|-|+.
T Consensus 94 ~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~ 137 (330)
T 2hes_X 94 TFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETD 137 (330)
T ss_dssp -CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECC
T ss_pred cccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEecc
Confidence 000 1123344444455543 2456666668889999984
No 134
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=56.76 E-value=64 Score=24.67 Aligned_cols=101 Identities=11% Similarity=0.073 Sum_probs=57.2
Q ss_pred CCEEEEE-eCCeEEEEECCCCCceeeEEeecC-CCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCc-cccc
Q psy74 17 NNVMYYV-KERFLHRLDLTNSKDSVVMQLRGG-GRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEES-ERKE 93 (134)
Q Consensus 17 ~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~-~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~-~~~~ 93 (134)
++.|+.. .+..|+.||+.+.+. +..+++. ...+...|.++|....++..+ ..|...++.+..... ...
T Consensus 182 ~~~l~~~~~d~~i~iwd~~~~~~--~~~~~~~~h~~~v~~~~~s~~~~~l~s~~------~dg~i~iwd~~~~~~~~~~- 252 (437)
T 3gre_A 182 KSLLVALTNLSRVIIFDIRTLER--LQIIENSPRHGAVSSICIDEECCVLILGT------TRGIIDIWDIRFNVLIRSW- 252 (437)
T ss_dssp CEEEEEEETTSEEEEEETTTCCE--EEEEECCGGGCCEEEEEECTTSCEEEEEE------TTSCEEEEETTTTEEEEEE-
T ss_pred CCEEEEEeCCCeEEEEeCCCCee--eEEEccCCCCCceEEEEECCCCCEEEEEc------CCCeEEEEEcCCccEEEEE-
Confidence 4445555 889999999987543 4444432 334789999999877666553 335667766543211 100
Q ss_pred ccCCccccceeEE-EE-e--C-C-eEEEEecCCEEEEEeCC
Q psy74 94 VADGKRSTGISAV-WV-A--R-N-RFAVLDRNHTILIKNLK 128 (134)
Q Consensus 94 ~~~~~~g~g~~Av-FV-a--R-N-RfAvldk~~~i~Iknl~ 128 (134)
.-...+ ...++ |- + + . .+|.-..+++|.|-|+.
T Consensus 253 -~~~~~~-~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~ 291 (437)
T 3gre_A 253 -SFGDHA-PITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFV 291 (437)
T ss_dssp -BCTTCE-EEEEEEECTTTCTTEEEEEEESTTEEEEEEETT
T ss_pred -ecCCCC-ceEEEEeccccCCCccEEEEEcCCCcEEEEEcC
Confidence 001111 22333 22 1 2 2 44444457889999986
No 135
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=56.56 E-value=92 Score=26.45 Aligned_cols=73 Identities=7% Similarity=0.106 Sum_probs=44.9
Q ss_pred CcceeeCCEEEEE-eCC----eEEEEECCCCC-------ceeeEEeecCCCCC---ceEEEeccCCCeEEEEeccCCCCC
Q psy74 11 PAYTVHNNVMYYV-KER----FLHRLDLTNSK-------DSVVMQLRGGGRIP---AHSISYNATEHSILVTTRNANNFE 75 (134)
Q Consensus 11 Pa~~~~~n~L~Yv-kek----~l~~~D~~t~~-------~~~~~slrg~~~~~---~~slsyNpae~~vLv~~~~~~~~d 75 (134)
|+|.-.+..+++. ... .|+.+|+.+++ ...+..-....|+. +.+..+.|....+++... ..
T Consensus 265 ~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s----~~ 340 (740)
T 4a5s_A 265 VTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIIS----NE 340 (740)
T ss_dssp EEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEE----CT
T ss_pred EEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEE----cC
Confidence 4555555555555 322 59999999865 22232222445665 567888898887763322 35
Q ss_pred CceEEEEEccCC
Q psy74 76 NSTYDLYMIPKE 87 (134)
Q Consensus 76 ~g~yeL~~lpk~ 87 (134)
+|..+|+.+..+
T Consensus 341 ~G~~~l~~~~~~ 352 (740)
T 4a5s_A 341 EGYRHICYFQID 352 (740)
T ss_dssp TSCEEEEEEETT
T ss_pred CCceEEEEEECC
Confidence 678889887654
No 136
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=55.74 E-value=86 Score=25.87 Aligned_cols=105 Identities=9% Similarity=0.108 Sum_probs=60.6
Q ss_pred CCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCccccccc
Q psy74 17 NNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVA 95 (134)
Q Consensus 17 ~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~~ 95 (134)
+..|.=. .++.++.||+.+........+.+..-....++.++|....++..+. | ++--|..+.....-.....
T Consensus 503 g~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~-----D-~~v~lW~~~~~~~~~~~~~ 576 (611)
T 1nr0_A 503 GAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSL-----D-NSVIVWNMNKPSDHPIIIK 576 (611)
T ss_dssp SSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEET-----T-SCEEEEETTCTTSCCEEET
T ss_pred CCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEEC-----C-CcEEEEECCCcccccchhh
Confidence 3444444 7899999999863221111011223446789999998775554422 4 4666666543211000112
Q ss_pred CCc-cccceeEEEEeCCeEEEEecCCEEEEEeC
Q psy74 96 DGK-RSTGISAVWVARNRFAVLDRNHTILIKNL 127 (134)
Q Consensus 96 ~~~-~g~g~~AvFVaRNRfAvldk~~~i~Iknl 127 (134)
..+ .+...+..|..-.++|.-..+++|.|-++
T Consensus 577 ~~h~~~~v~~v~fs~d~~l~s~~~D~~i~lW~~ 609 (611)
T 1nr0_A 577 GAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 609 (611)
T ss_dssp TSSTTSCEEEEEEEETTEEEEEETTSCEEEEEC
T ss_pred ccCcccCeeEEEEcCCCEEEEecCCCCEEEEec
Confidence 233 44556677887777777666889998876
No 137
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=55.71 E-value=65 Score=24.46 Aligned_cols=104 Identities=12% Similarity=0.271 Sum_probs=60.5
Q ss_pred CCEEEEE-eCCe-EEEEECCCCCceeeEEee-cCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCccccc
Q psy74 17 NNVMYYV-KERF-LHRLDLTNSKDSVVMQLR-GGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKE 93 (134)
Q Consensus 17 ~n~L~Yv-kek~-l~~~D~~t~~~~~~~slr-g~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~ 93 (134)
+..|.=. .|+. ++.||+.+.+ .+..++ |..-.+..+|.++|....++..+ +.|+-.+..+.........
T Consensus 207 g~~l~s~s~d~~~v~iwd~~~~~--~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s------~d~~v~iw~~~~~~~~~~~ 278 (355)
T 3vu4_A 207 SDMVATCSQDGTIIRVFKTEDGV--LVREFRRGLDRADVVDMKWSTDGSKLAVVS------DKWTLHVFEIFNDQDNKRH 278 (355)
T ss_dssp SSEEEEEETTCSEEEEEETTTCC--EEEEEECTTCCSCEEEEEECTTSCEEEEEE------TTCEEEEEESSCCSCCCSE
T ss_pred CCEEEEEeCCCCEEEEEECCCCc--EEEEEEcCCCCCcEEEEEECCCCCEEEEEE------CCCEEEEEEccCCCCcccc
Confidence 3444444 7887 9999998754 445666 54556789999999776655542 3356777766543210000
Q ss_pred ---------------------ccCCccccceeEEEEeCCeEEEEec-CCEEEEEeCC
Q psy74 94 ---------------------VADGKRSTGISAVWVARNRFAVLDR-NHTILIKNLK 128 (134)
Q Consensus 94 ---------------------~~~~~~g~g~~AvFVaRNRfAvldk-~~~i~Iknl~ 128 (134)
.............|-.-.++++.-. ++++.+.++.
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~ 335 (355)
T 3vu4_A 279 ALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVV 335 (355)
T ss_dssp ETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEE
T ss_pred cccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEE
Confidence 0001111124456777665555544 7888877763
No 138
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=55.31 E-value=72 Score=24.80 Aligned_cols=103 Identities=12% Similarity=0.191 Sum_probs=56.0
Q ss_pred CCEEEEEeCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCccccc--c
Q psy74 17 NNVMYYVKERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKE--V 94 (134)
Q Consensus 17 ~n~L~Yvkek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~--~ 94 (134)
...|+|.....|+..|+.......+. . ....|..|.|+|.+..+.++.. .++ .++.+..+...... .
T Consensus 44 ~~~ll~~~~~~I~~i~~~g~~~~~~~--~--~~~~~~~l~~d~~~~~ly~~D~-----~~~--~I~r~~~~g~~~~~~~~ 112 (349)
T 3v64_C 44 EPVLLFANRIDIRQVLPHRSEYTLLL--N--NLENAIALDFHHRRELVFWSDV-----TLD--RILRANLNGSNVEEVVS 112 (349)
T ss_dssp CCEEEEECBSCEEEECTTSCCEEEEE--C--SCSCEEEEEEETTTTEEEEEET-----TTT--EEEEEETTSCSCEEEEC
T ss_pred CceeEeecccceEEEeCCCCeeEEee--c--CCCceEEEEEeccccEEEEEec-----cCC--ceEEEecCCCCceEEEe
Confidence 35688888889999999875433222 2 2224789999999998877643 222 23333322211000 0
Q ss_pred cCCccccceeEEEEeCCeEEEEec-CCEEEEEeCCCce
Q psy74 95 ADGKRSTGISAVWVARNRFAVLDR-NHTILIKNLKNEF 131 (134)
Q Consensus 95 ~~~~~g~g~~AvFVaRNRfAvldk-~~~i~Iknl~n~~ 131 (134)
.....-.|++.-|.+ +++.+.|. ++.|.+-++++..
T Consensus 113 ~~~~~p~glavd~~~-g~ly~~d~~~~~I~~~~~dG~~ 149 (349)
T 3v64_C 113 TGLESPGGLAVDWVH-DKLYWTDSGTSRIEVANLDGAH 149 (349)
T ss_dssp SSCSCCCEEEEETTT-TEEEEEETTTTEEEEEETTSCS
T ss_pred CCCCCccEEEEecCC-CeEEEEcCCCCeEEEEcCCCCc
Confidence 011111244333333 34445555 6778887776653
No 139
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=55.20 E-value=50 Score=22.94 Aligned_cols=64 Identities=9% Similarity=0.211 Sum_probs=38.7
Q ss_pred eCCEEEEE--eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccC
Q psy74 16 HNNVMYYV--KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPK 86 (134)
Q Consensus 16 ~~n~L~Yv--kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk 86 (134)
.+..|+|. .+..++.|++..... ....+.. ....+..+.++|....+++... .++...++.+..
T Consensus 139 dg~~l~~~~~~~~~~~l~~~~~~~~-~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~-----~~~~~~i~~~~~ 204 (297)
T 2ojh_A 139 DGKSFTYCGIRDQVFDIYSMDIDSG-VETRLTH-GEGRNDGPDYSPDGRWIYFNSS-----RTGQMQIWRVRV 204 (297)
T ss_dssp TSSEEEEEEEETTEEEEEEEETTTC-CEEECCC-SSSCEEEEEECTTSSEEEEEEC-----TTSSCEEEEEET
T ss_pred CCCEEEEEECCCCceEEEEEECCCC-cceEccc-CCCccccceECCCCCEEEEEec-----CCCCccEEEECC
Confidence 45668876 677777777654211 1122321 2235688999998887777644 345677777653
No 140
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=54.43 E-value=78 Score=24.97 Aligned_cols=102 Identities=12% Similarity=0.195 Sum_probs=54.9
Q ss_pred CCEEEEEeCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCccccc--c
Q psy74 17 NNVMYYVKERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKE--V 94 (134)
Q Consensus 17 ~n~L~Yvkek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~--~ 94 (134)
...|+|.....|+..|+.......+++ ....|..|.|+|.+..+.++.. .++ .++.+..+...... .
T Consensus 87 ~~~l~~~~~~~I~~i~~~~~~~~~~~~----~~~~~~gl~~d~~~~~ly~~D~-----~~~--~I~r~~~~g~~~~~~~~ 155 (386)
T 3v65_B 87 EPVLLFANRIDIRQVLPHRSEYTLLLN----NLENAIALDFHHRRELVFWSDV-----TLD--RILRANLNGSNVEEVVS 155 (386)
T ss_dssp CCEEEEECBSCEEEECTTSCCCEEEEC----SCSCEEEEEEETTTTEEEEEET-----TTT--EEEEEETTSCCEEEEEC
T ss_pred cceeEeecCccceeeccCCCcEEEEec----CCCccEEEEEecCCCeEEEEeC-----CCC--cEEEEecCCCCcEEEEe
Confidence 346777888899999998754333322 2224789999999888877643 222 23333322211000 0
Q ss_pred cCCccccceeEEEEeCCeEEEEec-CCEEEEEeCCCc
Q psy74 95 ADGKRSTGISAVWVARNRFAVLDR-NHTILIKNLKNE 130 (134)
Q Consensus 95 ~~~~~g~g~~AvFVaRNRfAvldk-~~~i~Iknl~n~ 130 (134)
.....-.|++.-|.+ +++.+.|. ++.|.+-++++.
T Consensus 156 ~~~~~p~glavd~~~-g~lY~~d~~~~~I~~~~~dg~ 191 (386)
T 3v65_B 156 TGLESPGGLAVDWVH-DKLYWTDSGTSRIEVANLDGA 191 (386)
T ss_dssp SSCSCCCCEEEETTT-TEEEEEETTTTEEEECBTTSC
T ss_pred CCCCCccEEEEEeCC-CeEEEEcCCCCeEEEEeCCCC
Confidence 011111234333333 34455555 677777777654
No 141
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=53.65 E-value=76 Score=24.62 Aligned_cols=95 Identities=14% Similarity=0.187 Sum_probs=54.6
Q ss_pred eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCcccccccCCccccce
Q psy74 24 KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVADGKRSTGI 103 (134)
Q Consensus 24 kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~~~~~~g~g~ 103 (134)
.|+.|+.||+.+..-. ..++| .--+...+.++|....++..+. | |+..++.+..... ...-.+..+...
T Consensus 128 ~Dg~i~vwd~~~~~~~--~~l~~-h~~~V~~v~~~~~~~~l~sgs~-----D-~~i~iwd~~~~~~--~~~~~~h~~~V~ 196 (410)
T 1vyh_C 128 EDATIKVWDYETGDFE--RTLKG-HTDSVQDISFDHSGKLLASCSA-----D-MTIKLWDFQGFEC--IRTMHGHDHNVS 196 (410)
T ss_dssp SSSCEEEEETTTCCCC--EEECC-CSSCEEEEEECTTSSEEEEEET-----T-SCCCEEETTSSCE--EECCCCCSSCEE
T ss_pred CCCeEEEEECCCCcEE--EEEec-cCCcEEEEEEcCCCCEEEEEeC-----C-CeEEEEeCCCCce--eEEEcCCCCCEE
Confidence 8899999999985432 34443 2236789999998775444422 3 4555554432111 001123333344
Q ss_pred eEEEEeC-CeEEEEecCCEEEEEeCCC
Q psy74 104 SAVWVAR-NRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 104 ~AvFVaR-NRfAvldk~~~i~Iknl~n 129 (134)
+..|-.- +.++.-..+++|.|-|+..
T Consensus 197 ~v~~~p~~~~l~s~s~D~~i~~wd~~~ 223 (410)
T 1vyh_C 197 SVSIMPNGDHIVSASRDKTIKMWEVQT 223 (410)
T ss_dssp EEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred EEEEeCCCCEEEEEeCCCeEEEEECCC
Confidence 4455433 3466666688999998853
No 142
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=53.04 E-value=84 Score=24.91 Aligned_cols=104 Identities=10% Similarity=0.199 Sum_probs=57.4
Q ss_pred eCCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCcccccc
Q psy74 16 HNNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEV 94 (134)
Q Consensus 16 ~~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~ 94 (134)
.+..|... .|+.|+.||.... .+..+++ .-.+...|.+.|.+..++..+ ++|...++.+....- ..
T Consensus 396 dg~~l~~~~~d~~v~~~~~~~~---~~~~~~~-~~~~v~~~~~s~d~~~l~~~~------~d~~v~~w~~~~~~~---~~ 462 (577)
T 2ymu_A 396 DGQTIASASDDKTVKLWNRNGQ---LLQTLTG-HSSSVWGVAFSPDDQTIASAS------DDKTVKLWNRNGQLL---QT 462 (577)
T ss_dssp TSSCEEEEETTSEEEEECTTCC---EEEEEEC-CSSCEEEEEECTTSSEEEEEE------TTSEEEEEETTSCEE---EE
T ss_pred CCCEEEEEeCCCEEEEEeCCCC---EEEEecC-CCCCeEEEEECCCCCEEEEEc------CCCEEEEEECCCCEE---EE
Confidence 34455555 8899999996432 3334443 223567899999887666553 334566654322111 01
Q ss_pred cCCccccceeEEEEeCCe-EEEEecCCEEEEEeCCCceE
Q psy74 95 ADGKRSTGISAVWVARNR-FAVLDRNHTILIKNLKNEFC 132 (134)
Q Consensus 95 ~~~~~g~g~~AvFVaRNR-fAvldk~~~i~Iknl~n~~~ 132 (134)
-....+.-.+..|-.-.+ +|+-..+++|.|-|++++..
T Consensus 463 ~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~~ 501 (577)
T 2ymu_A 463 LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLL 501 (577)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTSCEE
T ss_pred EcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCCEE
Confidence 112333333444443334 44445578899988876654
No 143
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=52.69 E-value=73 Score=24.14 Aligned_cols=61 Identities=18% Similarity=0.184 Sum_probs=39.0
Q ss_pred eCCEEEEEe---------CCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEcc
Q psy74 16 HNNVMYYVK---------ERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIP 85 (134)
Q Consensus 16 ~~n~L~Yvk---------ek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lp 85 (134)
.++.|+..- +..|+.||+.+.+-.......+ .++.+.+.|....++++.. ..|...++.+.
T Consensus 264 ~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~----~~~~~~~~~~g~~l~~~~~-----~~~~v~v~d~~ 333 (433)
T 3bws_A 264 DGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPG----NKRHIVSGNTENKIYVSDM-----CCSKIEVYDLK 333 (433)
T ss_dssp TSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEE----CEEEEEECSSTTEEEEEET-----TTTEEEEEETT
T ss_pred CCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCC----CcceEEECCCCCEEEEEec-----CCCEEEEEECC
Confidence 345566653 6799999998765443333223 5788999998887777644 33455555443
No 144
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=52.45 E-value=67 Score=23.59 Aligned_cols=61 Identities=16% Similarity=0.197 Sum_probs=41.2
Q ss_pred eCCEEEEEe----------CCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEcc
Q psy74 16 HNNVMYYVK----------ERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIP 85 (134)
Q Consensus 16 ~~n~L~Yvk----------ek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lp 85 (134)
.|..++|+. +..|+.+|+.++....+ . ....+.+.|...-+++.... .+.+..+|+.++
T Consensus 23 dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l---~-----~~~~~~~SpDg~~la~~~~~---~~~~~~~l~~~~ 91 (347)
T 2gop_A 23 KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI---E-----NATMPRISPDGKKIAFMRAN---EEKKVSEIWVAD 91 (347)
T ss_dssp ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE---E-----SCEEEEECTTSSEEEEEEEE---TTTTEEEEEEEE
T ss_pred CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc---c-----cCCCeEECCCCCEEEEEEec---cCCCcceEEEEE
Confidence 788899984 45789999988654433 1 35677888888777766541 223677788766
Q ss_pred CC
Q psy74 86 KE 87 (134)
Q Consensus 86 k~ 87 (134)
-+
T Consensus 92 ~~ 93 (347)
T 2gop_A 92 LE 93 (347)
T ss_dssp TT
T ss_pred CC
Confidence 44
No 145
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=51.84 E-value=96 Score=26.60 Aligned_cols=106 Identities=17% Similarity=0.260 Sum_probs=56.5
Q ss_pred CCEEEEEeCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCccccc---
Q psy74 17 NNVMYYVKERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKE--- 93 (134)
Q Consensus 17 ~n~L~Yvkek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~--- 93 (134)
.-.|.|-+.+.|+..|+..........+. ....|..|.|.+.+..|.++.- .++.. ..+..+.....+
T Consensus 9 ~~~~~~~~~~~I~~i~~~~~~~~~~~~~~--~~~~~~~ld~~~~~~~ly~sD~-----~~~~I--~r~~~~g~~~~~~v~ 79 (619)
T 3s94_A 9 APLLLYANRRDLRLVDATNGKENATIVVG--GLEDAAAVDFVFSHGLIYWSDV-----SEEAI--KRTEFNKTESVQNVV 79 (619)
T ss_dssp -CCEEEECSSBEEEECCC---------CB--CCSCEEEEEEETTTTEEEEEET-----TTTEE--EEEEC-----CEEEE
T ss_pred CceEEEeccccEEEEeCCCCcceEEEEEc--CCCceEEEEEEeCCCEEEEEEC-----CCCeE--EEEEccCCCceEEEE
Confidence 34588899999999999874311112222 1225789999999998877643 22222 222212111000
Q ss_pred ccCCccccceeEEEEeCCeEEEEec-CCEEEEEeCCCceE
Q psy74 94 VADGKRSTGISAVWVARNRFAVLDR-NHTILIKNLKNEFC 132 (134)
Q Consensus 94 ~~~~~~g~g~~AvFVaRNRfAvldk-~~~i~Iknl~n~~~ 132 (134)
......-.|++.=|+++| +.+-|. ++.|.+-++++...
T Consensus 80 ~~~~~~P~GlAvD~~~~~-ly~~d~~~~~I~v~~~dG~~~ 118 (619)
T 3s94_A 80 VSGLLSPDGLACDWLGEK-LYWTDSETNRIEVSNLDGSLR 118 (619)
T ss_dssp CSSCSCEEEEEEETTTTE-EEEEETTTTEEEEEETTSCSC
T ss_pred eCCCCCcCeEEEEecCCE-EEEEeCCCCEEEEEECCCCCE
Confidence 011122246666566654 445565 88999999987654
No 146
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=51.50 E-value=1.1e+02 Score=25.63 Aligned_cols=102 Identities=18% Similarity=0.232 Sum_probs=59.8
Q ss_pred eCCEEEEEeCCeEEEEECCCCCceeeEEeecCCCCCceEEEe--ccCCC-eEEEEeccCCCCCC---ceEEEEEccCCCc
Q psy74 16 HNNVMYYVKERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISY--NATEH-SILVTTRNANNFEN---STYDLYMIPKEES 89 (134)
Q Consensus 16 ~~n~L~Yvkek~l~~~D~~t~~~~~~~slrg~~~~~~~slsy--Npae~-~vLv~~~~~~~~d~---g~yeL~~lpk~~~ 89 (134)
..++|-.|-++.+++|+++....--.+-=|-..+...+-++| ++.+. ++|+--.. .++ |...||..-+..+
T Consensus 116 s~~~L~lVT~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~---~~~~v~G~mQLYS~er~~s 192 (365)
T 2xzh_A 116 SLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISA---QQNRVVGAMQLYSVDRKVS 192 (365)
T ss_dssp SSSEEEEEESSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEE---ETTEEEEEEEEEETTTTEE
T ss_pred CCCeEEEEcCCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEec---cCCccceeEEEEeeccccc
Confidence 445677788999999999873322223333223334566677 46666 55543221 234 8999997666544
Q ss_pred ccccccCCccccceeEEEEe---------CCeEEEEecC---CEEEEEeCC
Q psy74 90 ERKEVADGKRSTGISAVWVA---------RNRFAVLDRN---HTILIKNLK 128 (134)
Q Consensus 90 ~~~~~~~~~~g~g~~AvFVa---------RNRfAvldk~---~~i~Iknl~ 128 (134)
... .|.+|+|.. -+=|++-.|+ ++|-|-.+.
T Consensus 193 Q~i--------eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~ 235 (365)
T 2xzh_A 193 QPI--------EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVG 235 (365)
T ss_dssp EEE--------CCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECS
T ss_pred cee--------eeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcC
Confidence 333 477777752 1235666652 467777763
No 147
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=50.83 E-value=49 Score=24.47 Aligned_cols=29 Identities=21% Similarity=0.369 Sum_probs=23.9
Q ss_pred CCCcceeeCCEEEEE--eCCeEEEEECCCCC
Q psy74 9 ERPAYTVHNNVMYYV--KERFLHRLDLTNSK 37 (134)
Q Consensus 9 ERPa~~~~~n~L~Yv--kek~l~~~D~~t~~ 37 (134)
|-|+++-.++.|||+ .+..|+.||..+..
T Consensus 16 Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~ 46 (297)
T 3g4e_A 16 ESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQ 46 (297)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTTCC
T ss_pred cCCeEECCCCEEEEEECCCCEEEEEECCCCc
Confidence 667887767899998 78899999998754
No 148
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=50.47 E-value=92 Score=24.65 Aligned_cols=103 Identities=10% Similarity=0.199 Sum_probs=58.3
Q ss_pred CCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCccccccc
Q psy74 17 NNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKEVA 95 (134)
Q Consensus 17 ~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~~~ 95 (134)
+..|.-. .++.|+.||.... .+..+.+ ...+.+.+.+.|....++..+ ++|...+....... ...-
T Consensus 438 ~~~l~~~~~d~~v~~w~~~~~---~~~~~~~-~~~~v~~~~~spd~~~las~~------~d~~i~iw~~~~~~---~~~~ 504 (577)
T 2ymu_A 438 DQTIASASDDKTVKLWNRNGQ---LLQTLTG-HSSSVRGVAFSPDGQTIASAS------DDKTVKLWNRNGQL---LQTL 504 (577)
T ss_dssp SSEEEEEETTSEEEEEETTSC---EEEEEEC-CSSCEEEEEECTTSCEEEEEE------TTSEEEEEETTSCE---EEEE
T ss_pred CCEEEEEcCCCEEEEEECCCC---EEEEEcC-CCCCEEEEEEcCCCCEEEEEe------CCCEEEEEcCCCCE---EEEE
Confidence 4455555 7899999997532 3344443 233678899999777655442 33455555422110 1111
Q ss_pred CCccccceeEEEEeCCe-EEEEecCCEEEEEeCCCceE
Q psy74 96 DGKRSTGISAVWVARNR-FAVLDRNHTILIKNLKNEFC 132 (134)
Q Consensus 96 ~~~~g~g~~AvFVaRNR-fAvldk~~~i~Iknl~n~~~ 132 (134)
+...+...+..|-.-.+ +|.-..+++|.|-|++++..
T Consensus 505 ~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~~~~ 542 (577)
T 2ymu_A 505 TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLL 542 (577)
T ss_dssp ECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEE
T ss_pred eCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCCCEE
Confidence 23333344455554444 55556688999998876643
No 149
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=50.36 E-value=1e+02 Score=26.82 Aligned_cols=105 Identities=17% Similarity=0.208 Sum_probs=61.6
Q ss_pred eCCEEEEEeCCeEEEEECCCCCceeeEEeecCCCCCceEEEe--ccCCC-eEEEEeccCCCCCCceEEEEEccCCCcccc
Q psy74 16 HNNVMYYVKERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISY--NATEH-SILVTTRNANNFENSTYDLYMIPKEESERK 92 (134)
Q Consensus 16 ~~n~L~Yvkek~l~~~D~~t~~~~~~~slrg~~~~~~~slsy--Npae~-~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~ 92 (134)
..++|-.|-++.+++|+++....-..+-=|-..+....-++| ++.+. ++|+--...++.=.|...||..-+..+...
T Consensus 115 s~~~l~lVT~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~i 194 (494)
T 1bpo_A 115 SLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPI 194 (494)
T ss_dssp ETTEEEEECSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEE
T ss_pred CCCeEEEEcCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchh
Confidence 556788889999999999873222223333223334566677 46655 555532210111228999997666544333
Q ss_pred cccCCccccceeEEEEe---C------CeEEEEecC---CEEEEEeCC
Q psy74 93 EVADGKRSTGISAVWVA---R------NRFAVLDRN---HTILIKNLK 128 (134)
Q Consensus 93 ~~~~~~~g~g~~AvFVa---R------NRfAvldk~---~~i~Iknl~ 128 (134)
.|.+|+|.. . +=|++-.|+ .+|-|-.+.
T Consensus 195 --------eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~ 234 (494)
T 1bpo_A 195 --------EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVG 234 (494)
T ss_dssp --------CCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECS
T ss_pred --------eeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcC
Confidence 477788753 1 236666663 567777774
No 150
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=49.85 E-value=72 Score=23.20 Aligned_cols=54 Identities=4% Similarity=0.133 Sum_probs=36.0
Q ss_pred eCCEEEEE--eCCeEEEEECCCCCceeeEEee-cCC-----CCCceEEEeccCCCeEEEEec
Q psy74 16 HNNVMYYV--KERFLHRLDLTNSKDSVVMQLR-GGG-----RIPAHSISYNATEHSILVTTR 69 (134)
Q Consensus 16 ~~n~L~Yv--kek~l~~~D~~t~~~~~~~slr-g~~-----~~~~~slsyNpae~~vLv~~~ 69 (134)
.++.||.. .+..|..||..+.+-...+.+. +.. -..|+.+.+.|...-+++...
T Consensus 99 dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 160 (353)
T 3vgz_A 99 TTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGI 160 (353)
T ss_dssp TTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEE
T ss_pred CCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEec
Confidence 44556666 4589999999987655555553 111 113688999999887777653
No 151
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=49.51 E-value=88 Score=24.13 Aligned_cols=100 Identities=20% Similarity=0.304 Sum_probs=53.7
Q ss_pred EEEEEeCCeEEEEECCCCC-c--eeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCccccc--
Q psy74 19 VMYYVKERFLHRLDLTNSK-D--SVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKE-- 93 (134)
Q Consensus 19 ~L~Yvkek~l~~~D~~t~~-~--~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~-- 93 (134)
.|+|.....|+..|+.+.. + .++-.++ .+..|.|++.+..+.++.- .++. ++.+..+......
T Consensus 6 ~ll~~~~~~I~~i~l~~~~~~~~~~~~~~~-----~~~~ld~d~~~~~lyw~D~-----~~~~--I~r~~~~g~~~~~~~ 73 (318)
T 3sov_A 6 LLLYANRRDLRLVDATNGKENATIVVGGLE-----DAAAVDFVFSHGLIYWSDV-----SEEA--IKRTEFNKTESVQNV 73 (318)
T ss_dssp EEEEECEEEEEEEETTCTTSCCEEEEEEEE-----EEEEEEEEGGGTEEEEEET-----TTTE--EEEEETTSSSCCCEE
T ss_pred EEEEEccCeEEEEECCCCceEEEEEecCCC-----ccEEEEEEeCCCEEEEEEC-----CCCc--EEEEEccCCCceEEE
Confidence 4888888999999999853 2 2222333 4678899998888777643 2333 2222222111000
Q ss_pred -ccCCccccceeEEEEeCCeEEEEec-CCEEEEEeCCCce
Q psy74 94 -VADGKRSTGISAVWVARNRFAVLDR-NHTILIKNLKNEF 131 (134)
Q Consensus 94 -~~~~~~g~g~~AvFVaRNRfAvldk-~~~i~Iknl~n~~ 131 (134)
......-.|++.-|.++ ++.+-|. ++.|.+-++++..
T Consensus 74 ~~~~l~~p~glavd~~~g-~ly~~d~~~~~I~~~~~dG~~ 112 (318)
T 3sov_A 74 VVSGLLSPDGLACDWLGE-KLYWTDSETNRIEVSNLDGSL 112 (318)
T ss_dssp EEECCSCCCEEEEETTTT-EEEEEETTTTEEEEEETTSCS
T ss_pred EcCCCCCccEEEEEcCCC-eEEEEECCCCEEEEEECCCCc
Confidence 01111113444434333 3444555 6778887777543
No 152
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=49.16 E-value=1.1e+02 Score=25.23 Aligned_cols=53 Identities=8% Similarity=0.098 Sum_probs=31.4
Q ss_pred CcceeeCCEEEEEeCCeEEEEECCCCCc--eeeEEee-c-C------C-----CCCceEEEeccCCCeEEEE
Q psy74 11 PAYTVHNNVMYYVKERFLHRLDLTNSKD--SVVMQLR-G-G------G-----RIPAHSISYNATEHSILVT 67 (134)
Q Consensus 11 Pa~~~~~n~L~Yvkek~l~~~D~~t~~~--~~~~slr-g-~------~-----~~~~~slsyNpae~~vLv~ 67 (134)
|.+. ++.++|..+..| .||..+++. ..+.... . . . -.++..++++|. ..+++.
T Consensus 31 ~~w~--g~~~~~~~~~~i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~ 98 (706)
T 2z3z_A 31 LQWM--GDNYVFIEGDDL-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF 98 (706)
T ss_dssp CEEE--TTEEEEEETTEE-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE
T ss_pred CcCc--CCeEEEEeCCcE-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE
Confidence 3455 788888865569 999999766 5554432 1 0 0 035788999998 766665
No 153
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=48.19 E-value=66 Score=29.30 Aligned_cols=65 Identities=14% Similarity=0.161 Sum_probs=37.6
Q ss_pred EEEEE-eCCeEEEEECCCCCceeeEEeec--CCCCCceEEEeccCCC-eEEEEeccCCCCCCceEEEEEccC
Q psy74 19 VMYYV-KERFLHRLDLTNSKDSVVMQLRG--GGRIPAHSISYNATEH-SILVTTRNANNFENSTYDLYMIPK 86 (134)
Q Consensus 19 ~L~Yv-kek~l~~~D~~t~~~~~~~slrg--~~~~~~~slsyNpae~-~vLv~~~~~~~~d~g~yeL~~lpk 86 (134)
.||=+ .|+.||+||+.++.=+.-..|.. .+........-+|++. .+.|.+.+ .++|.|.++.++.
T Consensus 249 ~lftl~~D~~LRiWsl~t~~~v~t~dL~~~~~~~~~~~~~~~~~~~~~~i~v~~s~---~~~g~F~~~~~~~ 317 (950)
T 4gq2_M 249 VLVMLSLDYKLKVLDLSTNQCVETIELSQTILPLQSFPYLTSDHTTNSFIALYYPD---NSHGSFSIYKLNA 317 (950)
T ss_dssp EEEEEETTCEEEEEETTTTEEEEEEECCCCCCCSCCCCCEEECSSSTTEEEEEECC---SSSCEEEEEEEEE
T ss_pred EEEEEECCCEEEEEECCCCCeEeeecccccCCccccccccccCCCcccEEEEEEcC---CCCcEEEEEEEec
Confidence 45555 99999999999865444444441 1112223344556655 34444442 4678888877653
No 154
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=48.14 E-value=89 Score=23.82 Aligned_cols=105 Identities=10% Similarity=0.110 Sum_probs=56.1
Q ss_pred CCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccC---CCeEEEEeccCCCCCCceEEEEEccCCCc---
Q psy74 17 NNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNAT---EHSILVTTRNANNFENSTYDLYMIPKEES--- 89 (134)
Q Consensus 17 ~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpa---e~~vLv~~~~~~~~d~g~yeL~~lpk~~~--- 89 (134)
++.|+-. .++.|+.||+.+. .++..++-..-.+...|.+.|+ +...|++.. +.|...++.+.....
T Consensus 226 ~~~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~-----~dg~i~iwd~~~~~~~~~ 298 (437)
T 3gre_A 226 CCVLILGTTRGIIDIWDIRFN--VLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGS-----SKTFLTIWNFVKGHCQYA 298 (437)
T ss_dssp SCEEEEEETTSCEEEEETTTT--EEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEES-----TTEEEEEEETTTTEEEEE
T ss_pred CCEEEEEcCCCeEEEEEcCCc--cEEEEEecCCCCceEEEEeccccCCCccEEEEEc-----CCCcEEEEEcCCCcEEEE
Confidence 3334444 8899999999873 3444444112225778877765 223444433 444555655442210
Q ss_pred -----ccc---c-ccC------------CccccceeEEEEeCCe-EEEEecCCEEEEEeCCC
Q psy74 90 -----ERK---E-VAD------------GKRSTGISAVWVARNR-FAVLDRNHTILIKNLKN 129 (134)
Q Consensus 90 -----~~~---~-~~~------------~~~g~g~~AvFVaRNR-fAvldk~~~i~Iknl~n 129 (134)
+.+ . .++ ...+.-.+..|- .++ ++.-..+++|.|-|+++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~ 359 (437)
T 3gre_A 299 FINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNE 359 (437)
T ss_dssp EESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTC
T ss_pred EEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCC
Confidence 000 0 000 133344555666 554 45544589999999864
No 155
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=46.51 E-value=1.5e+02 Score=25.98 Aligned_cols=109 Identities=12% Similarity=0.124 Sum_probs=65.8
Q ss_pred cceeeCCEEEEE-eCCeEEEEECCCCCc-----eeeEEee---cCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEE
Q psy74 12 AYTVHNNVMYYV-KERFLHRLDLTNSKD-----SVVMQLR---GGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLY 82 (134)
Q Consensus 12 a~~~~~n~L~Yv-kek~l~~~D~~t~~~-----~~~~slr---g~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~ 82 (134)
+|.-.|..|+=. .|..|+.||+.++.- ..+-.++ ++......++++.|.. |++.. .|++.+ +.
T Consensus 136 afSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass----~D~tVr-lW 207 (588)
T 2j04_A 136 EWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAAL----SNNSVF-SM 207 (588)
T ss_dssp EECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEE----TTCCEE-EE
T ss_pred EEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc---EEEEe----CCCeEE-EE
Confidence 344455556555 799999999998643 1345554 2234568999999976 55544 465444 33
Q ss_pred EccCCCccc-cc-ccCCccccceeEEEEeCCeEEEEecCCEEEEEeCCCc
Q psy74 83 MIPKEESER-KE-VADGKRSTGISAVWVARNRFAVLDRNHTILIKNLKNE 130 (134)
Q Consensus 83 ~lpk~~~~~-~~-~~~~~~g~g~~AvFVaRNRfAvldk~~~i~Iknl~n~ 130 (134)
.+-...... .. -.+.+++.-.++.|. -+++|.-. .++|.+-++++.
T Consensus 208 d~~~~~~~~~~~tL~~~h~~~V~svaFs-g~~LASa~-~~tIkLWd~~~~ 255 (588)
T 2j04_A 208 TVSASSHQPVSRMIQNASRRKITDLKIV-DYKVVLTC-PGYVHKIDLKNY 255 (588)
T ss_dssp CCCSSSSCCCEEEEECCCSSCCCCEEEE-TTEEEEEC-SSEEEEEETTTT
T ss_pred ECCCCccccceeeecccccCcEEEEEEE-CCEEEEEe-CCeEEEEECCCC
Confidence 332211000 00 112455667778888 57888775 588999998754
No 156
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=45.85 E-value=1.3e+02 Score=24.96 Aligned_cols=101 Identities=15% Similarity=0.212 Sum_probs=54.7
Q ss_pred CEEEEE--eCCeEEEEEC--CCCCceeeEEee-cCCCCCceEEEecc----CCCeEEEEeccCCCCCCceEEEEEccCCC
Q psy74 18 NVMYYV--KERFLHRLDL--TNSKDSVVMQLR-GGGRIPAHSISYNA----TEHSILVTTRNANNFENSTYDLYMIPKEE 88 (134)
Q Consensus 18 n~L~Yv--kek~l~~~D~--~t~~~~~~~slr-g~~~~~~~slsyNp----ae~~vLv~~~~~~~~d~g~yeL~~lpk~~ 88 (134)
+...|+ .+..|+.||+ .+. ..+..++ |. .|+.+.++| ...-+.+... ..+++.++......
T Consensus 190 g~~l~v~~~d~~V~v~D~~~~t~--~~~~~i~~g~---~p~~va~sp~~~~dg~~l~v~~~-----~~~~v~v~D~~t~~ 259 (543)
T 1nir_A 190 GRYLLVIGRDARIDMIDLWAKEP--TKVAEIKIGI---EARSVESSKFKGYEDRYTIAGAY-----WPPQFAIMDGETLE 259 (543)
T ss_dssp SCEEEEEETTSEEEEEETTSSSC--EEEEEEECCS---EEEEEEECCSTTCTTTEEEEEEE-----ESSEEEEEETTTCC
T ss_pred CCEEEEECCCCeEEEEECcCCCC--cEEEEEecCC---CcceEEeCCCcCCCCCEEEEEEc-----cCCeEEEEeccccc
Confidence 345555 7889999999 543 3455566 32 479999999 7776666532 23455555321110
Q ss_pred c-ccccc----cCC---ccccceeEEEEeC--CeEEEEec-CCEEEEEeCC
Q psy74 89 S-ERKEV----ADG---KRSTGISAVWVAR--NRFAVLDR-NHTILIKNLK 128 (134)
Q Consensus 89 ~-~~~~~----~~~---~~g~g~~AvFVaR--NRfAvldk-~~~i~Iknl~ 128 (134)
- ...+. .+. ..+....++.++. .+|++-.+ +++|.+-|++
T Consensus 260 ~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~ 310 (543)
T 1nir_A 260 PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYK 310 (543)
T ss_dssp EEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECT
T ss_pred cceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEec
Confidence 0 00000 000 1122345666663 44555455 7888888775
No 157
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=45.82 E-value=66 Score=26.61 Aligned_cols=59 Identities=5% Similarity=0.017 Sum_probs=41.0
Q ss_pred CcceeeCCEEEEEeCCeEEEEECCCCCceeeEEeecCCC---------------CCceEEEeccCCCeEEEEec
Q psy74 11 PAYTVHNNVMYYVKERFLHRLDLTNSKDSVVMQLRGGGR---------------IPAHSISYNATEHSILVTTR 69 (134)
Q Consensus 11 Pa~~~~~n~L~Yvkek~l~~~D~~t~~~~~~~slrg~~~---------------~~~~slsyNpae~~vLv~~~ 69 (134)
|+|.-.+..|.|+.++.|+.+|..++....+........ ...+.+.++|....+++.+.
T Consensus 119 ~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~ 192 (723)
T 1xfd_A 119 AGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAI 192 (723)
T ss_dssp CCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEE
T ss_pred cEECCCCCEEEEEECCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEE
Confidence 566777889999999999999999865443332211111 12378999999888777654
No 158
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=45.78 E-value=90 Score=23.19 Aligned_cols=103 Identities=6% Similarity=0.080 Sum_probs=58.4
Q ss_pred EEEEE--eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCc-cccccc
Q psy74 19 VMYYV--KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEES-ERKEVA 95 (134)
Q Consensus 19 ~L~Yv--kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~-~~~~~~ 95 (134)
.++.+ .++.|+.||+.+.... ...+++..-.+..+|.++|....++..+ |+ ...+..+.+... ...+.-
T Consensus 183 ~~lasg~~dg~i~iwd~~~~~~~-~~~~~~~h~~~v~~l~fs~~g~~l~s~~------~~-~v~iwd~~~~~~~~~~~~~ 254 (343)
T 3lrv_A 183 LLLALYSPDGILDVYNLSSPDQA-SSRFPVDEEAKIKEVKFADNGYWMVVEC------DQ-TVVCFDLRKDVGTLAYPTY 254 (343)
T ss_dssp CEEEEECTTSCEEEEESSCTTSC-CEECCCCTTSCEEEEEECTTSSEEEEEE------SS-BEEEEETTSSTTCBSSCCC
T ss_pred CEEEEEcCCCEEEEEECCCCCCC-ccEEeccCCCCEEEEEEeCCCCEEEEEe------CC-eEEEEEcCCCCcceeeccc
Confidence 35554 8999999999985543 1334443445789999999877666553 33 667776655422 111100
Q ss_pred CCcccc--ceeEEEEeCCeEEEE-ec-CCEEEEEeCCC
Q psy74 96 DGKRST--GISAVWVARNRFAVL-DR-NHTILIKNLKN 129 (134)
Q Consensus 96 ~~~~g~--g~~AvFVaRNRfAvl-dk-~~~i~Iknl~n 129 (134)
+..... +.+..|=.-.++.+. .. ++.|.|.+++.
T Consensus 255 ~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 255 TIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDK 292 (343)
T ss_dssp BC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred ccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcc
Confidence 001111 123556555555555 33 67888888743
No 159
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=44.52 E-value=1.3e+02 Score=24.83 Aligned_cols=106 Identities=15% Similarity=0.096 Sum_probs=60.7
Q ss_pred CCcceeeCCEEEEE---eCCeEEEEECCCCCceeeEEee-cCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEcc
Q psy74 10 RPAYTVHNNVMYYV---KERFLHRLDLTNSKDSVVMQLR-GGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIP 85 (134)
Q Consensus 10 RPa~~~~~n~L~Yv---kek~l~~~D~~t~~~~~~~slr-g~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lp 85 (134)
+|.++++.+..+|| .+..|..||..+.+-. -.+. |.. ++.+.++|..+-+.+.+. | ++-.++.+-
T Consensus 140 ~~~~~~~p~~~~~vs~~~d~~V~v~D~~t~~~~--~~i~~g~~---~~~v~~spdg~~l~v~~~-----d-~~V~v~D~~ 208 (543)
T 1nir_A 140 KQLNDLDLPNLFSVTLRDAGQIALVDGDSKKIV--KVIDTGYA---VHISRMSASGRYLLVIGR-----D-ARIDMIDLW 208 (543)
T ss_dssp SCCSCCCGGGEEEEEEGGGTEEEEEETTTCCEE--EEEECSTT---EEEEEECTTSCEEEEEET-----T-SEEEEEETT
T ss_pred ccccccCCCCEEEEEEcCCCeEEEEECCCceEE--EEEecCcc---cceEEECCCCCEEEEECC-----C-CeEEEEECc
Confidence 56666654445665 6788999999886543 3344 432 789999999888888754 4 566666551
Q ss_pred CCCcccccccCCccccceeEEEEeC-----Ce-EEEEec-CCEEEEEeCC
Q psy74 86 KEESERKEVADGKRSTGISAVWVAR-----NR-FAVLDR-NHTILIKNLK 128 (134)
Q Consensus 86 k~~~~~~~~~~~~~g~g~~AvFVaR-----NR-fAvldk-~~~i~Iknl~ 128 (134)
.. ++... ....-|.+...+-++. .+ +++-+. .++|.|-|.+
T Consensus 209 ~~-t~~~~-~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~ 256 (543)
T 1nir_A 209 AK-EPTKV-AEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGE 256 (543)
T ss_dssp SS-SCEEE-EEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETT
T ss_pred CC-CCcEE-EEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecc
Confidence 01 11110 1111233344444554 33 444443 6677777663
No 160
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=43.52 E-value=53 Score=23.58 Aligned_cols=48 Identities=2% Similarity=-0.013 Sum_probs=29.9
Q ss_pred eCCEEEEE-------------eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEE
Q psy74 16 HNNVMYYV-------------KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVT 67 (134)
Q Consensus 16 ~~n~L~Yv-------------kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~ 67 (134)
.++.||.. .+..|+.||+.+.+....+.. |. .+..+.+.|....++++
T Consensus 92 dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~---~~~~~~~s~dg~~l~~~ 152 (337)
T 1pby_B 92 DGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PR---QITMLAWARDGSKLYGL 152 (337)
T ss_dssp TSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CS---SCCCEEECTTSSCEEEE
T ss_pred CCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CC---CcceeEECCCCCEEEEe
Confidence 45567776 368999999987544333322 22 35667777776655544
No 161
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=42.27 E-value=1.3e+02 Score=23.91 Aligned_cols=66 Identities=15% Similarity=0.310 Sum_probs=0.0
Q ss_pred cceeeCCEEEEE-eCCeEEEEECCCCCceeeEEee--cCCCCCce-EEEeccCCCeEEEEeccCCCCCCceEEE
Q psy74 12 AYTVHNNVMYYV-KERFLHRLDLTNSKDSVVMQLR--GGGRIPAH-SISYNATEHSILVTTRNANNFENSTYDL 81 (134)
Q Consensus 12 a~~~~~n~L~Yv-kek~l~~~D~~t~~~~~~~slr--g~~~~~~~-slsyNpae~~vLv~~~~~~~~d~g~yeL 81 (134)
+++-.++.||+. .+..|+.||..+.....+..+. |.....|+ .|.++|.+..++++.. .++-.+.+
T Consensus 225 av~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~----~~~~I~~~ 294 (409)
T 3hrp_A 225 ALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ----NLSSVYKI 294 (409)
T ss_dssp EECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEET----TTTEEEEE
T ss_pred EEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeC----CCCEEEEE
No 162
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=41.72 E-value=1.1e+02 Score=23.09 Aligned_cols=101 Identities=5% Similarity=0.022 Sum_probs=57.7
Q ss_pred EEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCc-cccc---
Q psy74 19 VMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEES-ERKE--- 93 (134)
Q Consensus 19 ~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~-~~~~--- 93 (134)
.|+=. .|+.|+.||..+.+....+... -.....+.|.|....++.. ...+...++.+..+.. +...
T Consensus 78 ~l~s~s~Dg~v~vWd~~~~~~~~~~~~~---~~~v~~~~~sp~g~~lasg------~~d~~i~v~~~~~~~~~~~~~~~~ 148 (354)
T 2pbi_B 78 RIVSSSQDGKVIVWDSFTTNKEHAVTMP---CTWVMACAYAPSGCAIACG------GLDNKCSVYPLTFDKNENMAAKKK 148 (354)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECS---SSCCCEEEECTTSSEEEEE------STTSEEEEEECCCCTTCCSGGGCE
T ss_pred EEEEEeCCCeEEEEECCCCCcceEEecC---CCCEEEEEECCCCCEEEEe------eCCCCEEEEEEeccccccccccce
Confidence 34333 8999999998875544333332 1246789999987765554 2345677776654322 1110
Q ss_pred ccCCccccceeEEEEeCC-eEEEEecCCEEEEEeCC
Q psy74 94 VADGKRSTGISAVWVARN-RFAVLDRNHTILIKNLK 128 (134)
Q Consensus 94 ~~~~~~g~g~~AvFVaRN-RfAvldk~~~i~Iknl~ 128 (134)
....+.+.-.+..|-.-. +++.-..+++|.|-|++
T Consensus 149 ~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~ 184 (354)
T 2pbi_B 149 SVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVE 184 (354)
T ss_dssp EEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETT
T ss_pred eeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCC
Confidence 111223323334444333 56666668899999885
No 163
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=41.38 E-value=98 Score=22.33 Aligned_cols=47 Identities=17% Similarity=0.210 Sum_probs=31.3
Q ss_pred eCCEEEEEeCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEE
Q psy74 16 HNNVMYYVKERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVT 67 (134)
Q Consensus 16 ~~n~L~Yvkek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~ 67 (134)
.++.||.. +..|+.||+.+.+-...+...+ .+..+.+.|...-+++.
T Consensus 266 dg~~l~~~-~~~v~~~d~~~~~~~~~~~~~~----~~~~~~~s~dg~~l~~~ 312 (349)
T 1jmx_B 266 DPNQIYGV-LNRLAKYDLKQRKLIKAANLDH----TYYCVAFDKKGDKLYLG 312 (349)
T ss_dssp CTTEEEEE-ESEEEEEETTTTEEEEEEECSS----CCCEEEECSSSSCEEEE
T ss_pred CCCEEEEE-cCeEEEEECccCeEEEEEcCCC----CccceEECCCCCEEEEe
Confidence 44555555 8899999998865443333322 36788999887766664
No 164
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=39.17 E-value=2.1e+02 Score=25.43 Aligned_cols=112 Identities=11% Similarity=0.127 Sum_probs=0.0
Q ss_pred cceeeCCEEEEE-eCCeEEEEECCCCCceeeEE-------ee-cCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEE
Q psy74 12 AYTVHNNVMYYV-KERFLHRLDLTNSKDSVVMQ-------LR-GGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLY 82 (134)
Q Consensus 12 a~~~~~n~L~Yv-kek~l~~~D~~t~~~~~~~s-------lr-g~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~ 82 (134)
+|.-.++.|+-- .+..|+.||+.+..-.++.. .. .....+..+|.++|.+...|++.. +.|.- |.
T Consensus 105 ~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~-----~dg~v-lW 178 (902)
T 2oaj_A 105 DTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISY-----EYVTL-TY 178 (902)
T ss_dssp ECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEEC-----SSCEE-EE
T ss_pred EECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEe-----CCCcE-EE
Q ss_pred EccCCCc-cccccc---------------CCccccceeEEEE-eCCeEEEEecCCEEEEEeCCC
Q psy74 83 MIPKEES-ERKEVA---------------DGKRSTGISAVWV-ARNRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 83 ~lpk~~~-~~~~~~---------------~~~~g~g~~AvFV-aRNRfAvldk~~~i~Iknl~n 129 (134)
.+..... ...... ..+.+...++.|- .-+.||.-..+++|.|-|++.
T Consensus 179 d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~ 242 (902)
T 2oaj_A 179 SLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANS 242 (902)
T ss_dssp ETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTT
T ss_pred ECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCC
No 165
>3ovu_B Iron-regulated surface determinant protein H; haemoglobin, AHSP, NEAT domain, ISDH, protein-protein comple pathogen interaction, oxygen transport-protein binding COMP; HET: HEM; 2.83A {Staphylococcus aureus} PDB: 3s48_A* 3szk_F* 2h3k_A
Probab=37.88 E-value=1.2e+02 Score=22.34 Aligned_cols=69 Identities=16% Similarity=0.318 Sum_probs=52.4
Q ss_pred cceeeCCEEEEEeCCeEEEEECCCCCceeeEEee-cCCCCCceEEEeccC--CCeEEEEeccCCCCCCceEEEEEcc
Q psy74 12 AYTVHNNVMYYVKERFLHRLDLTNSKDSVVMQLR-GGGRIPAHSISYNAT--EHSILVTTRNANNFENSTYDLYMIP 85 (134)
Q Consensus 12 a~~~~~n~L~Yvkek~l~~~D~~t~~~~~~~slr-g~~~~~~~slsyNpa--e~~vLv~~~~~~~~d~g~yeL~~lp 85 (134)
|+++.--.++|-|++-.--++++|...--.+.+= |....|..-+||+|- +.|-+=.. ..+|+=||-.++
T Consensus 64 aSt~~PA~V~ftk~k~~vEl~l~tastwkKFEVYe~dkKLPv~LVSyd~~~kD~AYIRFp-----VsnGtkevkIvs 135 (164)
T 3ovu_B 64 FSIKDPADVYYTKKKAEVELDINTASTWKKFEVYENNQKLPVRLVSYSPVPEDHAYIRFP-----VSDGTQELKIVS 135 (164)
T ss_dssp HHBCSSEEEECCSSSEEEEEEESCTTTEEEEEEBSSSCBCCCEEEEEECTTTCEEEEEEE-----ECTTEEEEEEEE
T ss_pred eecCCcceEEEeCCCceEEEeeccccceeeeEEecCCcccceEEEecCCCCCcceEEEee-----cCCCceEEEEEE
Confidence 4555666799999999999999997777777777 889999999999985 45555442 356677776544
No 166
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=37.61 E-value=1.3e+02 Score=22.69 Aligned_cols=46 Identities=9% Similarity=0.065 Sum_probs=26.6
Q ss_pred CCEEEEEeCCeEEEEECC-CCCceeeEEeecCCCCCceEEEeccCCCeE
Q psy74 17 NNVMYYVKERFLHRLDLT-NSKDSVVMQLRGGGRIPAHSISYNATEHSI 64 (134)
Q Consensus 17 ~n~L~Yvkek~l~~~D~~-t~~~~~~~slrg~~~~~~~slsyNpae~~v 64 (134)
+..||...+..++.||+. +.+-..+....+.. .|..+.+.|...-+
T Consensus 51 g~~l~~~~~~~v~~~~~~~~g~~~~~~~~~~~g--~~~~~~~spdg~~l 97 (365)
T 1jof_A 51 RKNIYGAAMKKWSSFAVKSPTEIVHEASHPIGG--HPRANDADTNTRAI 97 (365)
T ss_dssp SSEEEEEEBTEEEEEEEEETTEEEEEEEEECCS--SGGGGCTTSCCEEE
T ss_pred CCEEEEEccceEEEEEECCCCCEEEeeEeecCC--CCccEEECCCCCEE
Confidence 445665655599999997 54322233332111 25568888877753
No 167
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=37.33 E-value=1.7e+02 Score=24.01 Aligned_cols=105 Identities=9% Similarity=0.168 Sum_probs=58.0
Q ss_pred CCEEEEE-eCCeEEEEECCCCCceeeEE---ee-cCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCc-c
Q psy74 17 NNVMYYV-KERFLHRLDLTNSKDSVVMQ---LR-GGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEES-E 90 (134)
Q Consensus 17 ~n~L~Yv-kek~l~~~D~~t~~~~~~~s---lr-g~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~-~ 90 (134)
+..|.-. .|+.|+.||+.+......+. ++ -..-.++.++.++|....++.. . ..++..|..+..... .
T Consensus 202 g~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~-s-----~D~~v~lWd~~~~~~~~ 275 (611)
T 1nr0_A 202 GSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASA-S-----ADKTIKIWNVATLKVEK 275 (611)
T ss_dssp SSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEE-E-----TTSEEEEEETTTTEEEE
T ss_pred CCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEE-e-----CCCeEEEEeCCCCceee
Confidence 3444444 89999999998754332221 01 0233467899999977655443 2 334666665542211 0
Q ss_pred cccccCCccccceeEEEEeCCeEEEEecCCEEEEEeCC
Q psy74 91 RKEVADGKRSTGISAVWVARNRFAVLDRNHTILIKNLK 128 (134)
Q Consensus 91 ~~~~~~~~~g~g~~AvFVaRNRfAvldk~~~i~Iknl~ 128 (134)
.............+.+| ..+.++....+++|.+-|++
T Consensus 276 ~~~~~~~~~~~~~~~~~-~~~~l~s~s~d~~i~~~~~~ 312 (611)
T 1nr0_A 276 TIPVGTRIEDQQLGIIW-TKQALVSISANGFINFVNPE 312 (611)
T ss_dssp EEECCSSGGGCEEEEEE-CSSCEEEEETTCCEEEEETT
T ss_pred eecCCCCccceeEEEEE-cCCEEEEEeCCCcEEEEeCC
Confidence 00001112223344556 67777777777788777764
No 168
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=36.55 E-value=1.4e+02 Score=22.58 Aligned_cols=105 Identities=10% Similarity=0.128 Sum_probs=58.1
Q ss_pred CEEEEE-eCCeEEEEECCCCCc--eeeEEeecCCC-----------CCceEEEeccCCCeEEEEeccCCCCCCceEEEEE
Q psy74 18 NVMYYV-KERFLHRLDLTNSKD--SVVMQLRGGGR-----------IPAHSISYNATEHSILVTTRNANNFENSTYDLYM 83 (134)
Q Consensus 18 n~L~Yv-kek~l~~~D~~t~~~--~~~~slrg~~~-----------~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~ 83 (134)
+.|+.. .++.|+.||+.+... ..+..+.+..- .+..++.++|....++.. . + |...++.
T Consensus 240 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~-~-----~-~~v~iwd 312 (447)
T 3dw8_B 240 NTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTR-D-----Y-LSVKVWD 312 (447)
T ss_dssp TEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEE-E-----S-SEEEEEE
T ss_pred cEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEe-e-----C-CeEEEEe
Confidence 455555 899999999998543 12344442211 267899999966654433 3 4 7888887
Q ss_pred ccCCCc--ccccccCCccc--------cc----eeEEEEeCCe-EEEEecCCEEEEEeCCC
Q psy74 84 IPKEES--ERKEVADGKRS--------TG----ISAVWVARNR-FAVLDRNHTILIKNLKN 129 (134)
Q Consensus 84 lpk~~~--~~~~~~~~~~g--------~g----~~AvFVaRNR-fAvldk~~~i~Iknl~n 129 (134)
+..... ......+.... .+ ....|-.-.+ +|.-..+++|.|-|++.
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~ 373 (447)
T 3dw8_B 313 LNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNT 373 (447)
T ss_dssp TTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTT
T ss_pred CCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCC
Confidence 754211 11100000000 11 1255554444 54555588999999864
No 169
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=36.12 E-value=73 Score=23.35 Aligned_cols=54 Identities=11% Similarity=0.284 Sum_probs=36.2
Q ss_pred CcceeeCCEEEEEeCC------eEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEec
Q psy74 11 PAYTVHNNVMYYVKER------FLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTR 69 (134)
Q Consensus 11 Pa~~~~~n~L~Yvkek------~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~ 69 (134)
|++.-.+..|+|+.++ +|+.+|+.++....+....+ ...+.+.|....+++...
T Consensus 64 ~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-----~~~~~wspdg~~l~~~~~ 123 (347)
T 2gop_A 64 PRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-----IRSLEWNEDSRKLLIVGF 123 (347)
T ss_dssp EEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-----EEEEEECTTSSEEEEEEE
T ss_pred eEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-----ccceeECCCCCEEEEEEc
Confidence 5566678889998432 48889988755444433321 677888888887777653
No 170
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=35.87 E-value=2.4e+02 Score=25.19 Aligned_cols=105 Identities=9% Similarity=0.033 Sum_probs=58.2
Q ss_pred eCCEEEEE--eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCccccc
Q psy74 16 HNNVMYYV--KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKE 93 (134)
Q Consensus 16 ~~n~L~Yv--kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~ 93 (134)
.++.||+. ..+.|++.|+..+....++. .....|+.|..+|...-+.++.. .+.+..+.+.+ +.+....
T Consensus 481 ~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~---~~l~~P~gIaVDp~~g~LYwtD~----g~~~~I~~~~~--dG~~~~~ 551 (791)
T 3m0c_C 481 IHSNIYWTDSVLGTVSVADTKGVKRKTLFR---ENGSKPRAIVVDPVHGFMYWTDW----GTPAKIKKGGL--NGVDIYS 551 (791)
T ss_dssp TTTEEEEEETTTTEEEEEETTSSSEEEEEE---CTTCCEEEEEEETTTTEEEEEEC----SSSCEEEEEET--TSCCEEE
T ss_pred cCCcEEEEecCCCeEEEEeCCCCeEEEEEe---CCCCCcceEEEecCCCCEEEecC----CCCCeEEEEec--CCCceEE
Confidence 46689988 56789999998655444433 23346899999998877766643 22244444432 2111000
Q ss_pred ccCCccccceeEEEEe--CCeEEEEec-CCEEEEEeCCCc
Q psy74 94 VADGKRSTGISAVWVA--RNRFAVLDR-NHTILIKNLKNE 130 (134)
Q Consensus 94 ~~~~~~g~g~~AvFVa--RNRfAvldk-~~~i~Iknl~n~ 130 (134)
.... ....-.++=|. ..|+-+-|. ++.|..-++++.
T Consensus 552 lv~~-~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~ 590 (791)
T 3m0c_C 552 LVTE-NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 590 (791)
T ss_dssp EECS-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEeC-CCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCC
Confidence 0000 00122234443 556666676 677777777654
No 171
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=35.53 E-value=2e+02 Score=24.16 Aligned_cols=59 Identities=14% Similarity=0.067 Sum_probs=35.8
Q ss_pred CcceeeCCEEEEE-eCC----------------eEEEEECCCCCceeeEEeec-CCCCCceEEEeccCCCeEEEEec
Q psy74 11 PAYTVHNNVMYYV-KER----------------FLHRLDLTNSKDSVVMQLRG-GGRIPAHSISYNATEHSILVTTR 69 (134)
Q Consensus 11 Pa~~~~~n~L~Yv-kek----------------~l~~~D~~t~~~~~~~slrg-~~~~~~~slsyNpae~~vLv~~~ 69 (134)
|+++-.+..|||. .+. +|+.||+.+......+-..+ ..-.....+++.|...-+++...
T Consensus 176 ~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 176 MAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp EEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred EEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 4455566789998 333 39999999854332222231 11112457788898887777654
No 172
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=35.15 E-value=1.2e+02 Score=21.67 Aligned_cols=51 Identities=16% Similarity=0.266 Sum_probs=34.8
Q ss_pred eCCEEEEE--eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEec
Q psy74 16 HNNVMYYV--KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTR 69 (134)
Q Consensus 16 ~~n~L~Yv--kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~ 69 (134)
.++.||+. ....|+.+|+.+.....+. ......|+.|.+.|....+.++..
T Consensus 46 ~~~~ly~~d~~~~~I~~~~~~g~~~~~~~---~~~~~~p~~ia~d~~~~~lyv~d~ 98 (267)
T 1npe_A 46 VDKVVYWTDISEPSIGRASLHGGEPTTII---RQDLGSPEGIALDHLGRTIFWTDS 98 (267)
T ss_dssp TTTEEEEEETTTTEEEEEESSSCCCEEEE---CTTCCCEEEEEEETTTTEEEEEET
T ss_pred CCCEEEEEECCCCEEEEEecCCCCcEEEE---ECCCCCccEEEEEecCCeEEEEEC
Confidence 46788887 4678999999875432222 223346899999998777777643
No 173
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=35.04 E-value=1.4e+02 Score=22.44 Aligned_cols=63 Identities=10% Similarity=0.063 Sum_probs=37.3
Q ss_pred CCEEEEE--eCCeEEEEECC-CCCceeeEEeecC-CCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEc
Q psy74 17 NNVMYYV--KERFLHRLDLT-NSKDSVVMQLRGG-GRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMI 84 (134)
Q Consensus 17 ~n~L~Yv--kek~l~~~D~~-t~~~~~~~slrg~-~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~l 84 (134)
+..||.. .+..|+.||+. +.+-..+..+... .-..|+.+.+.|...-+.+... .++.-.++.+
T Consensus 156 G~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~-----~~~~v~v~~~ 222 (365)
T 1jof_A 156 ETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALME-----AGNRICEYVI 222 (365)
T ss_dssp SSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEET-----TTTEEEEEEE
T ss_pred CCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEEC-----CCCeEEEEEE
Confidence 4455444 25789999998 5543334344411 1235899999998876666532 3345555543
No 174
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=35.03 E-value=1.3e+02 Score=21.72 Aligned_cols=51 Identities=10% Similarity=0.078 Sum_probs=33.1
Q ss_pred CCEEEEE--eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEec
Q psy74 17 NNVMYYV--KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTR 69 (134)
Q Consensus 17 ~n~L~Yv--kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~ 69 (134)
++.+|.. .+..|+.||..+.+-...+.+ + ....+..+.+.|....++++..
T Consensus 10 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~-~-~~~~~~~~~~s~dg~~~~v~~~ 62 (349)
T 1jmx_B 10 GHEYMIVTNYPNNLHVVDVASDTVYKSCVM-P-DKFGPGTAMMAPDNRTAYVLNN 62 (349)
T ss_dssp TCEEEEEEETTTEEEEEETTTTEEEEEEEC-S-SCCSSCEEEECTTSSEEEEEET
T ss_pred CCEEEEEeCCCCeEEEEECCCCcEEEEEec-C-CCCCCceeEECCCCCEEEEEeC
Confidence 4455554 788999999987654333333 2 1124788999998876666543
No 175
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=34.20 E-value=1.8e+02 Score=23.17 Aligned_cols=97 Identities=12% Similarity=0.223 Sum_probs=54.9
Q ss_pred eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCccccc-cc---CCcc
Q psy74 24 KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKE-VA---DGKR 99 (134)
Q Consensus 24 kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~-~~---~~~~ 99 (134)
.++.|+.||+.+. ..+....+ ....++.+.++|....+++.+. | |.--++.+-........ .. ....
T Consensus 170 ~Dg~v~iwD~~~~--~~~~~~~~-~~~~v~~v~wspdg~~lasgs~-----d-g~v~iwd~~~~~~~~~~~~~~~~~~~~ 240 (434)
T 2oit_A 170 ADGSIAVLQVTET--VKVCATLP-STVAVTSVCWSPKGKQLAVGKQ-----N-GTVVQYLPTLQEKKVIPCPPFYESDHP 240 (434)
T ss_dssp TTSCEEEEEESSS--EEEEEEEC-GGGCEEEEEECTTSSCEEEEET-----T-SCEEEECTTCCEEEEECCCTTCCTTSC
T ss_pred CCCeEEEEEcCCC--cceeeccC-CCCceeEEEEcCCCCEEEEEcC-----C-CcEEEEccCCcccccccCCcccCCCCc
Confidence 8999999999876 22333333 2336789999998776666533 3 34445433211000000 00 0112
Q ss_pred ccceeEEEEeCCeEEEEec--C------CEEEEEeCCC
Q psy74 100 STGISAVWVARNRFAVLDR--N------HTILIKNLKN 129 (134)
Q Consensus 100 g~g~~AvFVaRNRfAvldk--~------~~i~Iknl~n 129 (134)
....+..|-....|++.-. + ..+.|.++.+
T Consensus 241 ~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 241 VRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPK 278 (434)
T ss_dssp EEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCC
T ss_pred eeEEEEEEecCceEEEEEccCCCccCCCCceEEEEecc
Confidence 3577888988888875432 2 2377888754
No 176
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=33.98 E-value=1.8e+02 Score=23.36 Aligned_cols=107 Identities=10% Similarity=0.049 Sum_probs=60.3
Q ss_pred cceeeCCEEEEE--eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCc
Q psy74 12 AYTVHNNVMYYV--KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEES 89 (134)
Q Consensus 12 a~~~~~n~L~Yv--kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~ 89 (134)
+++..++.++|+ .+..+..||+.+++-..+.. +.. .++.+.|.-.-++..+. .+++..+|+.+.-+..
T Consensus 116 ~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~--~~~----~~~~~spDG~~la~~~~----~~~~~~~i~~~d~~~g 185 (582)
T 3o4h_A 116 SGVDTGEAVVFTGATEDRVALYALDGGGLRELAR--LPG----FGFVSDIRGDLIAGLGF----FGGGRVSLFTSNLSSG 185 (582)
T ss_dssp EEEECSSCEEEEEECSSCEEEEEEETTEEEEEEE--ESS----CEEEEEEETTEEEEEEE----EETTEEEEEEEETTTC
T ss_pred eeCCCCCeEEEEecCCCCceEEEccCCcEEEeec--CCC----ceEEECCCCCEEEEEEE----cCCCCeEEEEEcCCCC
Confidence 455567778887 56667799998764433332 211 67788888777665544 2344566777653322
Q ss_pred ccccccCCccccceeEEEEeCCeEEE-EecCC--EEEEEeCCC
Q psy74 90 ERKEVADGKRSTGISAVWVARNRFAV-LDRNH--TILIKNLKN 129 (134)
Q Consensus 90 ~~~~~~~~~~g~g~~AvFVaRNRfAv-ldk~~--~i~Iknl~n 129 (134)
....-....+...+..|-.-.++.+ -+..+ +|.+.|++.
T Consensus 186 -~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~ 227 (582)
T 3o4h_A 186 -GLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRD 227 (582)
T ss_dssp -CCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTT
T ss_pred -CceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCC
Confidence 1111122233345566654444433 33455 788888864
No 177
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=33.02 E-value=1.3e+02 Score=21.29 Aligned_cols=62 Identities=11% Similarity=0.106 Sum_probs=41.4
Q ss_pred CCEEEEEeCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEcc
Q psy74 17 NNVMYYVKERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIP 85 (134)
Q Consensus 17 ~n~L~Yvkek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lp 85 (134)
+|.|----|+.|+.||+.+++-...+.+.+ .-....++.++|...-++..+ ..|+..+..+.
T Consensus 36 ~~~lAvg~D~tV~iWd~~tg~~~~~~~~~~-~~~~V~~v~~~~~~~~l~sgs------~Dg~v~iw~~~ 97 (318)
T 4ggc_A 36 GNVLAVALDNSVYLWSASSGDILQLLQMEQ-PGEYISSVAWIKEGNYLAVGT------SSAEVQLWDVQ 97 (318)
T ss_dssp TSEEEEEETTEEEEEETTTCCEEEEEECCS-TTCCEEEEEECTTSSEEEEEE------TTSEEEEEETT
T ss_pred CCEEEEEeCCEEEEEECCCCCEEEEEEecC-CCCeEEEEEECCCCCEEEEEE------CCCcEEEeecC
Confidence 344433389999999999977666666553 223578999999887666543 33466666544
No 178
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=31.76 E-value=1.5e+02 Score=21.71 Aligned_cols=52 Identities=12% Similarity=0.078 Sum_probs=33.3
Q ss_pred CCCcceeeCCEEEEE--eCCeEEEEECCCCCceeeEEee-cCCCCCceEEEeccCCCeEEEE
Q psy74 9 ERPAYTVHNNVMYYV--KERFLHRLDLTNSKDSVVMQLR-GGGRIPAHSISYNATEHSILVT 67 (134)
Q Consensus 9 ERPa~~~~~n~L~Yv--kek~l~~~D~~t~~~~~~~slr-g~~~~~~~slsyNpae~~vLv~ 67 (134)
|-|+++-.++.|||+ .+..|+.||.... . -.++ +. ..+..|.+.|..+ ++++
T Consensus 48 egp~~~~~g~~l~~~d~~~~~i~~~~~~g~--~--~~~~~~~--~~~~gl~~d~dG~-l~v~ 102 (305)
T 3dr2_A 48 EGPAWWEAQRTLVWSDLVGRRVLGWREDGT--V--DVLLDAT--AFTNGNAVDAQQR-LVHC 102 (305)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEEETTSC--E--EEEEESC--SCEEEEEECTTSC-EEEE
T ss_pred cCCeEeCCCCEEEEEECCCCEEEEEeCCCC--E--EEEeCCC--CccceeeECCCCC-EEEE
Confidence 678888888889998 6788999987422 1 1222 11 1356777777554 4444
No 179
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=31.11 E-value=1.6e+02 Score=25.09 Aligned_cols=72 Identities=8% Similarity=0.219 Sum_probs=46.3
Q ss_pred cceeeCCEEEEE-eCCeEEEEECCCCCceeeEEee-c-C------CCCCceEEEeccCCCeEEEEeccCCCCCCceEEEE
Q psy74 12 AYTVHNNVMYYV-KERFLHRLDLTNSKDSVVMQLR-G-G------GRIPAHSISYNATEHSILVTTRNANNFENSTYDLY 82 (134)
Q Consensus 12 a~~~~~n~L~Yv-kek~l~~~D~~t~~~~~~~slr-g-~------~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~ 82 (134)
|...++.+|-=+ .|..||.||+....+.|. -|+ . + ......++++-+.-..+-+.+. ..+|-.|.||
T Consensus 134 Pl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~---t~~GDIYAlc 209 (452)
T 3pbp_A 134 PKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNT---TEGGDIFAFY 209 (452)
T ss_dssp TTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEEC---TTSCEEEEES
T ss_pred cccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEec---CCCCCEEEEC
Confidence 344567788777 777999999999777787 665 1 1 1123456777665445555432 1356688888
Q ss_pred E-ccCC
Q psy74 83 M-IPKE 87 (134)
Q Consensus 83 ~-lpk~ 87 (134)
. ||+.
T Consensus 210 P~LP~~ 215 (452)
T 3pbp_A 210 PFLPSV 215 (452)
T ss_dssp SCCCSE
T ss_pred CCCccc
Confidence 6 6654
No 180
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=29.65 E-value=2.6e+02 Score=23.81 Aligned_cols=105 Identities=9% Similarity=0.126 Sum_probs=68.3
Q ss_pred eCCEEEEEeCCeEEEEECCCCCceeeEEee-cC--CCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCc-cc
Q psy74 16 HNNVMYYVKERFLHRLDLTNSKDSVVMQLR-GG--GRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEES-ER 91 (134)
Q Consensus 16 ~~n~L~Yvkek~l~~~D~~t~~~~~~~slr-g~--~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~-~~ 91 (134)
++..||++.++.||..++.... .+=.|+ .. .....+.|..||...-+.+... -.-.++.||.... ..
T Consensus 31 n~t~i~~a~~n~iR~~~i~~~~--~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-------~~V~Vv~LP~~~~~~~ 101 (452)
T 3pbp_A 31 NGTRIVFIQDNIIRWYNVLTDS--LYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-------NEIFVMEVPWGYSNVE 101 (452)
T ss_dssp TTTEEEEEETTEEEEEETTTCS--SCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-------SEEEEEECCTTCSCCC
T ss_pred CCCEEEEEECCEEEEEECCCCC--cceEEecCcccccCceeEEEECCCCCEEEEecC-------CeEEEEEecCccccCc
Confidence 5667999999999999998643 566666 32 3435788999999886666532 2577778884322 11
Q ss_pred c-------c-------ccCC-ccccceeEEE--EeC--CeEEEEecCCEEEEEeCCC
Q psy74 92 K-------E-------VADG-KRSTGISAVW--VAR--NRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 92 ~-------~-------~~~~-~~g~g~~AvF--VaR--NRfAvldk~~~i~Iknl~n 129 (134)
. + +.+. .++.-..|+| .+- .-++||..+.+|.+.|++.
T Consensus 102 ~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 102 DVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp CHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred ccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 0 0 0000 1222445667 233 3788999999999999975
No 181
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=28.74 E-value=39 Score=29.46 Aligned_cols=45 Identities=7% Similarity=0.212 Sum_probs=29.4
Q ss_pred EEEEEeCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEE
Q psy74 19 VMYYVKERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVT 67 (134)
Q Consensus 19 ~L~Yvkek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~ 67 (134)
.|+|...+.|+..|+.+..-..++. ....|..|.|.|.+..+.++
T Consensus 379 ~ll~~~~~~I~~id~~~~~~~~~~~----~~~~p~gla~d~~~~~Ly~s 423 (699)
T 1n7d_A 379 YLFFTNRHEVRKMTLDRSEYTSLIP----NLRNVVALDTEVASNRIYWS 423 (699)
T ss_dssp CBCCCCTTC-CEECTTSCCEECCSC----CCTTCCCCEEETTTTEEEEC
T ss_pred eEEecCccceEEEeCCCCcceeeec----cCcceEEEccccccCeEEEE
Confidence 4677788899999988754332221 12246788999888877665
No 182
>3kvp_A Uncharacterized protein YMZC; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.40A {Bacillus subtilis}
Probab=28.31 E-value=30 Score=22.52 Aligned_cols=22 Identities=23% Similarity=0.345 Sum_probs=18.5
Q ss_pred EEEeCCeEEEEecCCEEEEEeCC
Q psy74 106 VWVARNRFAVLDRNHTILIKNLK 128 (134)
Q Consensus 106 vFVaRNRfAvldk~~~i~Iknl~ 128 (134)
+=+.-|+||+++ .++|-|.-.+
T Consensus 25 vqLe~nhFgv~e-~g~iKIykyd 46 (72)
T 3kvp_A 25 FPLEHNHFGVME-DGYIKIYEYN 46 (72)
T ss_dssp EECSTTEEEEEE-TTEEEEEEEE
T ss_pred eeecCCEEEEEe-CCEEEEEEeC
Confidence 778999999999 7788887663
No 183
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=28.17 E-value=2.7e+02 Score=23.49 Aligned_cols=53 Identities=13% Similarity=0.092 Sum_probs=34.6
Q ss_pred CCEEEEEeCCeEEEEECCCCCceeeEEee-cCCCC-CceEEEeccCCCeEEEEec
Q psy74 17 NNVMYYVKERFLHRLDLTNSKDSVVMQLR-GGGRI-PAHSISYNATEHSILVTTR 69 (134)
Q Consensus 17 ~n~L~Yvkek~l~~~D~~t~~~~~~~slr-g~~~~-~~~slsyNpae~~vLv~~~ 69 (134)
++.++|..+..|+.||+.++....++.-. ...+. ....+++.|....+++.+.
T Consensus 27 dg~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~ 81 (740)
T 4a5s_A 27 DHEYLYKQENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYN 81 (740)
T ss_dssp SSEEEEEETTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEE
T ss_pred CCcEEEEcCCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEEC
Confidence 34566667899999999997765553333 11221 2344788898888887755
No 184
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=28.10 E-value=3.7e+02 Score=25.08 Aligned_cols=109 Identities=10% Similarity=0.085 Sum_probs=60.3
Q ss_pred EEEecCCCCccee--eCCEEEEEeCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEE----------Eecc
Q psy74 3 VFKFERERPAYTV--HNNVMYYVKERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILV----------TTRN 70 (134)
Q Consensus 3 VFKLeRERPa~~~--~~n~L~Yvkek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv----------~~~~ 70 (134)
|+|-|=+-|+.++ .++.|.---.+.|+.||+..++..- +..+ .+.....++.....+-|+| -|+
T Consensus 879 v~~~~v~g~v~al~~~~g~Lla~ig~~l~vy~l~~~~~L~-~~~~--~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~- 954 (1158)
T 3ei3_A 879 VAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECN--HYNNIMALYLKTKGDFILVGDLMRSVLLLAYK- 954 (1158)
T ss_dssp EEEEEESSCEEEEEEETTEEEEEETTEEEEEEECTTSCEE-EEEE--ECCCSCEEEEEEETTEEEEEESSBCEEEEEEE-
T ss_pred EEEEEcCCcCEEEeeeCCEEEEEcCCEEEEEECCCCceEE-EEee--ccccEEEEEEeccCCEEEEEEhhheEEEEEEE-
Confidence 4566667788777 4566666688999999998754322 1111 1100111111112223333 233
Q ss_pred CCCCCCceEEEEEccCCCcccccccCCccccceeEEEEeCCeEEEEecCCEEEEEeCCC
Q psy74 71 ANNFENSTYDLYMIPKEESERKEVADGKRSTGISAVWVARNRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 71 ~~~~d~g~yeL~~lpk~~~~~~~~~~~~~g~g~~AvFVaRNRfAvldk~~~i~Iknl~n 129 (134)
.+.+..+++ .+ |...-...++.|+.-+.|++=|+.++|.|-..+.
T Consensus 955 ---~~~~~L~~~--a~---------D~~~~~vta~~~ld~~t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 955 ---PMEGNFEEI--AR---------DFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp ---TTTTEEEEE--EE---------CCSCBCEEEEEEEETTEEEEEETTSEEEEEEECT
T ss_pred ---cCCCeEEEE--Ee---------ecccccEEEEEEEccCcEEEEcCCCcEEEEecCC
Confidence 222222222 22 2222357889999999999999988888766543
No 185
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=27.73 E-value=2.1e+02 Score=22.04 Aligned_cols=105 Identities=16% Similarity=0.179 Sum_probs=59.7
Q ss_pred eCCEEEEE--eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCccccc
Q psy74 16 HNNVMYYV--KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKE 93 (134)
Q Consensus 16 ~~n~L~Yv--kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~ 93 (134)
.++.||+. ..+.|.+.|+.......++. .....|+.|..+|.+..+.++.. .+.+. ++.+..+.+....
T Consensus 126 ~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~---~~l~~P~~iavdp~~g~ly~td~----~~~~~--I~r~~~dG~~~~~ 196 (349)
T 3v64_C 126 VHDKLYWTDSGTSRIEVANLDGAHRKVLLW---QSLEKPRAIALHPMEGTIYWTDW----GNTPR--IEASSMDGSGRRI 196 (349)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEEC---TTCSCEEEEEEETTTTEEEEEEC----SSSCE--EEEEETTSCSCEE
T ss_pred CCCeEEEEcCCCCeEEEEcCCCCceEEEEe---CCCCCcceEEEecCcCeEEEecc----CCCCE--EEEEeCCCCCcEE
Confidence 46788888 56789999988644333321 23446899999999887777643 22233 3333333221110
Q ss_pred ccCCccccceeEEEEe--CCeEEEEec-CCEEEEEeCCCc
Q psy74 94 VADGKRSTGISAVWVA--RNRFAVLDR-NHTILIKNLKNE 130 (134)
Q Consensus 94 ~~~~~~g~g~~AvFVa--RNRfAvldk-~~~i~Iknl~n~ 130 (134)
... .....-.++=+. ..++-+-|. ++.|..-++++.
T Consensus 197 ~~~-~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~ 235 (349)
T 3v64_C 197 IAD-THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS 235 (349)
T ss_dssp SCC-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEE-CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 000 011122344443 566777776 788888888754
No 186
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=27.72 E-value=66 Score=23.97 Aligned_cols=33 Identities=30% Similarity=0.527 Sum_probs=24.6
Q ss_pred CcceeeCCEEEEE-eCCeEEEEECCCCCceeeEE
Q psy74 11 PAYTVHNNVMYYV-KERFLHRLDLTNSKDSVVMQ 43 (134)
Q Consensus 11 Pa~~~~~n~L~Yv-kek~l~~~D~~t~~~~~~~s 43 (134)
|++.-.+..|+|+ .++.|+.+|+.+.+...+..
T Consensus 86 ~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~ 119 (388)
T 3pe7_A 86 GFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQ 119 (388)
T ss_dssp CEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred eEEcCCCCEEEEEeCCCeEEEEECCCCcceeeee
Confidence 4566677889999 56799999999866554443
No 187
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=26.60 E-value=3.4e+02 Score=24.05 Aligned_cols=97 Identities=10% Similarity=0.043 Sum_probs=0.0
Q ss_pred CcceeeCCEEEEE-eCCeEEEEECCCCCceeeEEee-cCCCCCceEEEeccCCCeEEEEeccCCCCC------CceEEEE
Q psy74 11 PAYTVHNNVMYYV-KERFLHRLDLTNSKDSVVMQLR-GGGRIPAHSISYNATEHSILVTTRNANNFE------NSTYDLY 82 (134)
Q Consensus 11 Pa~~~~~n~L~Yv-kek~l~~~D~~t~~~~~~~slr-g~~~~~~~slsyNpae~~vLv~~~~~~~~d------~g~yeL~ 82 (134)
+++.-.+..|.|. .+..|+.||+.+++...+..-. + +...+++.|...-++.... .+ .+...++
T Consensus 384 ~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~----~v~~~~~SpDG~~la~~~~----~~~~~~~~~~~~~i~ 455 (1045)
T 1k32_A 384 MGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREA----MITDFTISDNSRFIAYGFP----LKHGETDGYVMQAIH 455 (1045)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSS----CCCCEEECTTSCEEEEEEE----ECSSTTCSCCEEEEE
T ss_pred eEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCC----CccceEECCCCCeEEEEec----CccccccCCCCCeEE
Q ss_pred EccCCCcccccccCCccccceeEEEEeCCeEEEE
Q psy74 83 MIPKEESERKEVADGKRSTGISAVWVARNRFAVL 116 (134)
Q Consensus 83 ~lpk~~~~~~~~~~~~~g~g~~AvFVaRNRfAvl 116 (134)
.+.-+... ...-........+..|-.-.+.+++
T Consensus 456 l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~ 488 (1045)
T 1k32_A 456 VYDMEGRK-IFAATTENSHDYAPAFDADSKNLYY 488 (1045)
T ss_dssp EEETTTTE-EEECSCSSSBEEEEEECTTSCEEEE
T ss_pred EEECCCCc-EEEeeCCCcccCCceEcCCCCEEEE
No 188
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=25.36 E-value=3e+02 Score=23.57 Aligned_cols=47 Identities=6% Similarity=0.086 Sum_probs=30.2
Q ss_pred cceeeCCEEEEE-eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccC
Q psy74 12 AYTVHNNVMYYV-KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNAT 60 (134)
Q Consensus 12 a~~~~~n~L~Yv-kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpa 60 (134)
+.+.-++.+|+. .|.+|+.||..|.+..--..+-+.....| ++|.+.
T Consensus 481 ~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p--~ty~~~ 528 (689)
T 1yiq_A 481 TLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAP--VTYSVD 528 (689)
T ss_dssp EEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC--EEEEET
T ss_pred cceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCc--eEEEEC
Confidence 445577888887 89999999999977654444432222233 666433
No 189
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=24.44 E-value=2.5e+02 Score=21.89 Aligned_cols=105 Identities=16% Similarity=0.164 Sum_probs=58.5
Q ss_pred eCCEEEEE--eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCceEEEEEccCCCccccc
Q psy74 16 HNNVMYYV--KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENSTYDLYMIPKEESERKE 93 (134)
Q Consensus 16 ~~n~L~Yv--kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~yeL~~lpk~~~~~~~ 93 (134)
.++.||+. ..+.|.++|+.......++. .....|+.|..+|.+..+.++.. .+.+.. +.+..+.+....
T Consensus 169 ~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~---~~l~~P~giavdp~~g~ly~td~----~~~~~I--~r~~~dG~~~~~ 239 (386)
T 3v65_B 169 VHDKLYWTDSGTSRIEVANLDGAHRKVLLW---QSLEKPRAIALHPMEGTIYWTDW----GNTPRI--EASSMDGSGRRI 239 (386)
T ss_dssp TTTEEEEEETTTTEEEECBTTSCSCEEEEC---SSCSCEEEEEEETTTTEEEEEEC----SSSCEE--EEEETTSCSCEE
T ss_pred CCCeEEEEcCCCCeEEEEeCCCCceEEeec---CCCCCCcEEEEEcCCCeEEEecc----CCCCEE--EEEeCCCCCcEE
Confidence 36778887 46789999987643333322 23446899999999887777643 222333 333333221110
Q ss_pred ccCCccccceeEEEEe--CCeEEEEec-CCEEEEEeCCCc
Q psy74 94 VADGKRSTGISAVWVA--RNRFAVLDR-NHTILIKNLKNE 130 (134)
Q Consensus 94 ~~~~~~g~g~~AvFVa--RNRfAvldk-~~~i~Iknl~n~ 130 (134)
.... ....-.++=+. ..++-+-|. ++.|..-++++.
T Consensus 240 ~~~~-~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (386)
T 3v65_B 240 IADT-HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS 278 (386)
T ss_dssp EECS-SCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSC
T ss_pred EEEC-CCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 0000 01112344443 566777777 778888887653
No 190
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=24.38 E-value=3.2e+02 Score=23.08 Aligned_cols=109 Identities=16% Similarity=0.173 Sum_probs=0.0
Q ss_pred CCEEEEE--eCCeEEEEECC-------CCCc------------eeeEEeecCCCCCceEEEeccCCCeEEEEeccCCCCC
Q psy74 17 NNVMYYV--KERFLHRLDLT-------NSKD------------SVVMQLRGGGRIPAHSISYNATEHSILVTTRNANNFE 75 (134)
Q Consensus 17 ~n~L~Yv--kek~l~~~D~~-------t~~~------------~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d 75 (134)
+..|||. +..+|+.||+. +..- ..+..+-+..| |+.|.++|..+.+.|+ |
T Consensus 258 ~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~--p~~ia~~p~G~~lYva-------D 328 (496)
T 3kya_A 258 NGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSW--EFQIFIHPTGKYAYFG-------V 328 (496)
T ss_dssp TCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSC--CEEEEECTTSSEEEEE-------E
T ss_pred CCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCC--ceEEEEcCCCCEEEEE-------e
Q ss_pred CceEEEEEccCCCcc-------------------cccccCCccccceeEEEE--------eCCeEEEEec-CCEEEEEeC
Q psy74 76 NSTYDLYMIPKEESE-------------------RKEVADGKRSTGISAVWV--------ARNRFAVLDR-NHTILIKNL 127 (134)
Q Consensus 76 ~g~yeL~~lpk~~~~-------------------~~~~~~~~~g~g~~AvFV--------aRNRfAvldk-~~~i~Iknl 127 (134)
.+.-.+..+..+... +....+.+-..-...+|+ +...+.|-|. +|.|..-+.
T Consensus 329 ~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~ 408 (496)
T 3kya_A 329 INNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP 408 (496)
T ss_dssp TTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECT
T ss_pred CCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeC
Q ss_pred CCceEeC
Q psy74 128 KNEFCTV 134 (134)
Q Consensus 128 ~n~~~K~ 134 (134)
++.++.+
T Consensus 409 ~G~v~Ti 415 (496)
T 3kya_A 409 EGIVSTY 415 (496)
T ss_dssp TCBEEEE
T ss_pred CCCEEEE
No 191
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=21.35 E-value=1e+02 Score=25.32 Aligned_cols=28 Identities=11% Similarity=0.503 Sum_probs=23.7
Q ss_pred EEEE-----eCCeEEEEecCCEEEEEeCCCceE
Q psy74 105 AVWV-----ARNRFAVLDRNHTILIKNLKNEFC 132 (134)
Q Consensus 105 AvFV-----aRNRfAvldk~~~i~Iknl~n~~~ 132 (134)
|+|+ ++.+++.-+|.+-|.+.||++++.
T Consensus 30 avw~~~~dp~~s~ii~t~k~~gL~Vydl~G~~l 62 (355)
T 3amr_A 30 AIWLDPKTPQNSKLITTNKKSGLVVYSLDGKML 62 (355)
T ss_dssp EEECCSSCGGGCEEEEEETTTEEEEEETTSCEE
T ss_pred cEecCCCCCCccEEEEEcCCCCEEEEcCCCcEE
Confidence 9999 677888889988999999987754
No 192
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=21.11 E-value=3.5e+02 Score=22.28 Aligned_cols=113 Identities=7% Similarity=0.060 Sum_probs=0.0
Q ss_pred CcceeeCCEEEEEeCCeEEEEECCCCCceeeEEeecCC---------------CCCceEEEeccCCCeEEEEeccCCCCC
Q psy74 11 PAYTVHNNVMYYVKERFLHRLDLTNSKDSVVMQLRGGG---------------RIPAHSISYNATEHSILVTTRNANNFE 75 (134)
Q Consensus 11 Pa~~~~~n~L~Yvkek~l~~~D~~t~~~~~~~slrg~~---------------~~~~~slsyNpae~~vLv~~~~~~~~d 75 (134)
|+|.-.|..|.|+.++.|+.+|+.++....+..--... ....+.+++.|....++..+. +...
T Consensus 115 ~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~--d~~~ 192 (719)
T 1z68_A 115 LCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEF--NDTD 192 (719)
T ss_dssp EEECSSTTCEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEE--ECTT
T ss_pred ceECCCCCEEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEE--CCCC
Q ss_pred CceE----------------------------EEEEccCCCcccc--------cccCCccccceeEEEEeCCeEEEE--e
Q psy74 76 NSTY----------------------------DLYMIPKEESERK--------EVADGKRSTGISAVWVARNRFAVL--D 117 (134)
Q Consensus 76 ~g~y----------------------------eL~~lpk~~~~~~--------~~~~~~~g~g~~AvFVaRNRfAvl--d 117 (134)
-..| +|+.+.-+..... ..-....+...+..|-.-.++++. +
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~ 272 (719)
T 1z68_A 193 IPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLK 272 (719)
T ss_dssp SCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEE
T ss_pred CceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEec
Q ss_pred c-CCEEEEE
Q psy74 118 R-NHTILIK 125 (134)
Q Consensus 118 k-~~~i~Ik 125 (134)
+ .+...|+
T Consensus 273 ~~~~~~~l~ 281 (719)
T 1z68_A 273 RVQNVSVLS 281 (719)
T ss_dssp SSTTEEEEE
T ss_pred cccCeEEEE
No 193
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=20.91 E-value=3.1e+02 Score=23.67 Aligned_cols=49 Identities=10% Similarity=0.093 Sum_probs=31.9
Q ss_pred eCCEEEEE--eCCeEEEEECCCCCceeeEEeecCCCCCceEEEeccCCCeEEEE
Q psy74 16 HNNVMYYV--KERFLHRLDLTNSKDSVVMQLRGGGRIPAHSISYNATEHSILVT 67 (134)
Q Consensus 16 ~~n~L~Yv--kek~l~~~D~~t~~~~~~~slrg~~~~~~~slsyNpae~~vLv~ 67 (134)
.++.||+. ....|.++|+....-..++. .....|+.|...|...-+.++
T Consensus 463 ~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~---~~~~~P~giavDp~~g~ly~t 513 (699)
T 1n7d_A 463 IHSNIYWTDSVLGTVSVADTKGVKRKTLFR---EQGSKPRAIVVDPVHGFMYWT 513 (699)
T ss_dssp SSSBCEECCTTTSCEEEEBSSSCCEEEECC---CSSCCCCCEECCSSSSCCEEC
T ss_pred eCCcEEEEeccCCeEEEEecCCCceEEEEe---CCCCCcceEEEccCCCcEEEc
Confidence 45678776 55779999987643333222 233468889999987766654
No 194
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=20.74 E-value=3.8e+02 Score=22.60 Aligned_cols=115 Identities=9% Similarity=0.022 Sum_probs=61.3
Q ss_pred CCcceeeCCEEEEEe-C--------------CeEEEEECCCCCc--eeeEEeecCCCCCceEEEeccCCCeEEEEeccCC
Q psy74 10 RPAYTVHNNVMYYVK-E--------------RFLHRLDLTNSKD--SVVMQLRGGGRIPAHSISYNATEHSILVTTRNAN 72 (134)
Q Consensus 10 RPa~~~~~n~L~Yvk-e--------------k~l~~~D~~t~~~--~~~~slrg~~~~~~~slsyNpae~~vLv~~~~~~ 72 (134)
-|+++-. ..|||.. + .+|+.+|+.+... ..+....+.. ....++++.|...-+++....
T Consensus 213 ~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~-~~~~~~~~SpDG~~l~~~~~~-- 288 (741)
T 1yr2_A 213 GLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELP-KRGHGASVSSDGRWVVITSSE-- 288 (741)
T ss_dssp CCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCT-TCEEEEEECTTSCEEEEEEEC--
T ss_pred cEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCC-eEEEEEEECCCCCEEEEEEEc--
Confidence 3455555 7899983 2 2499999988543 2222222211 124577888888777666541
Q ss_pred CCCCceEEEEEccCCCc-cc-ccccCCccccceeEEEEeCCeEEEEec----CCEEEEEeCCC
Q psy74 73 NFENSTYDLYMIPKEES-ER-KEVADGKRSTGISAVWVARNRFAVLDR----NHTILIKNLKN 129 (134)
Q Consensus 73 ~~d~g~yeL~~lpk~~~-~~-~~~~~~~~g~g~~AvFVaRNRfAvldk----~~~i~Iknl~n 129 (134)
..++..+|+.++-+.. +. ...-....+.....+|-...+|+++.. +..|.+-++++
T Consensus 289 -~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~ 350 (741)
T 1yr2_A 289 -GTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSG 350 (741)
T ss_dssp -TTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSS
T ss_pred -cCCCcceEEEEECCCCCCcccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCC
Confidence 1124567776653321 11 111111112233445556677777754 45588877764
No 195
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=20.07 E-value=2.8e+02 Score=20.77 Aligned_cols=103 Identities=14% Similarity=0.217 Sum_probs=54.8
Q ss_pred CEEEEE---eCCeEEEEECCCCCc-------------ee-eEEeecCCCCCceEEEeccCCCeEEEEeccCCCCCCce-E
Q psy74 18 NVMYYV---KERFLHRLDLTNSKD-------------SV-VMQLRGGGRIPAHSISYNATEHSILVTTRNANNFENST-Y 79 (134)
Q Consensus 18 n~L~Yv---kek~l~~~D~~t~~~-------------~~-~~slrg~~~~~~~slsyNpae~~vLv~~~~~~~~d~g~-y 79 (134)
+.|.+. .+..|+.||+.+... .| +..++| ...+...|.++|...-++.. . .| |+ .
T Consensus 148 ~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~-h~~~v~~~~~s~~g~~l~s~-s----~d-~~~v 220 (355)
T 3vu4_A 148 GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKA-HTNPIKMVRLNRKSDMVATC-S----QD-GTII 220 (355)
T ss_dssp TEEEEEESSCTTCEEEEECCC------------------CCEEECC-CSSCEEEEEECTTSSEEEEE-E----TT-CSEE
T ss_pred cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEc-cCCceEEEEECCCCCEEEEE-e----CC-CCEE
Confidence 445553 667788888776331 12 333443 33468899999966544433 3 24 45 6
Q ss_pred EEEEccCCCc-ccccccCC-ccccceeEEEEeC-CeEEEEecCCEEEEEeCCC
Q psy74 80 DLYMIPKEES-ERKEVADG-KRSTGISAVWVAR-NRFAVLDRNHTILIKNLKN 129 (134)
Q Consensus 80 eL~~lpk~~~-~~~~~~~~-~~g~g~~AvFVaR-NRfAvldk~~~i~Iknl~n 129 (134)
.+..+..... ... ..+ ..+...+..|-.- +.+|.-..+++|.|-|+++
T Consensus 221 ~iwd~~~~~~~~~~--~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~ 271 (355)
T 3vu4_A 221 RVFKTEDGVLVREF--RRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFN 271 (355)
T ss_dssp EEEETTTCCEEEEE--ECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSC
T ss_pred EEEECCCCcEEEEE--EcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccC
Confidence 6665543211 100 111 3333444555433 3455555689999999964
Done!