BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy740
(763 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3D2F|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70
pdb|3D2F|C Chain C, Crystal Structure Of A Complex Of Sse1p And Hsp70
Length = 675
Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 164/466 (35%), Positives = 246/466 (52%), Gaps = 58/466 (12%)
Query: 164 KIIASAANPYLGGRNIDYKLAKHFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSAN 223
K++ +A + + GGR+ D + +HF+ EFK KY I+ NP+A+ R+LT EKLKK +SAN
Sbjct: 222 KVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSAN 281
Query: 224 STKLPFGIECFMNDIDVKGEMCRSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEI 283
T PF +E MND+DV ++ R E+EEL K + E V + + L ++KL+ ++ VEI
Sbjct: 282 -TNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEI 340
Query: 284 VGGSSRIPAIKGLIEKIFQKTPSTTLNQDEAVARGCALQCAMLSPAVRVRDFSVTDLQVY 343
+GG++RIP +K I + F K STTLNQDEA+A+G A CA+ SP +RVR F D+ Y
Sbjct: 341 IGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAIHSPTLRVRPFKFEDIHPY 400
Query: 344 PVVMEWDPSPNEPKDSKNFITVFPEMHAAPFSKKMTFYQNKPFAIQLYYEGNVPYPSKF- 402
V WD + + ++ + VFP + P +K +T + F++ Y P
Sbjct: 401 SVSYSWD----KQVEDEDHMEVFPAGSSFPSTKLITLNRTGDFSMAASYTDITQLPPNTP 456
Query: 403 --IGKYQINDVKPGPDNASQKVTVKVRVNMDGVIGVIAASMVEKVENSGDTESMDVENTE 460
I ++I V+ S V +K+R + G+ + A +E +E DT+++
Sbjct: 457 EQIANWEITGVQLPEGQDSVPVKLKLRCDPSGLHTIEEAYTIEDIEAGSDTKTV------ 510
Query: 461 EENGQKQEAGSENTENKAEKTQEGQSEDXXXXXXXXXXXVVSKTLDLTISATTHGLSPEQ 520
K DLTI A T GL ++
Sbjct: 511 ------------------------------------------KKDDLTIVAHTFGLDAKK 528
Query: 521 LNAHTELEGKMIADDKLEKERIDARNCLEEYVYDLRNKLGSEEEFALYIAADDASKLSTQ 580
LN E E +M+A DKL E D +N LEEY+Y LR KL EEE+A + + + +KL
Sbjct: 529 LNELIEKENEMLAQDKLVAETEDRKNTLEEYIYTLRGKL--EEEYAPFASDAEKTKLQGM 586
Query: 581 LDETENWLYEEGADVNKSVYISKLDELKAIGEKIRQRKVDYEEKTK 626
L++ E WLY+EG D K+ YI+K +EL ++G IR R + EE+ K
Sbjct: 587 LNKAEEWLYDEGFDSIKAKYIAKYEELASLGNIIRGRYLAKEEEKK 632
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 96/166 (57%), Gaps = 2/166 (1%)
Query: 7 IGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTVTNMKNT 66
G+D GN + +A AR GI+ + N+ S R+TPS V F +NR LG KN+ +N+KNT
Sbjct: 5 FGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNT 64
Query: 67 IHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQITAMLLT 126
+ KR+IG ++ P + E K + E D G +V++ E VF+ Q+ AM +
Sbjct: 65 VANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFID 124
Query: 127 KLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIASAANP 172
K+++T + + NI+D ++VP +YT +R + DAA+I + NP
Sbjct: 125 KVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARI--AGLNP 168
>pdb|3C7N|A Chain A, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex
Length = 668
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 168/466 (36%), Positives = 251/466 (53%), Gaps = 40/466 (8%)
Query: 164 KIIASAANPYLGGRNIDYKLAKHFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSAN 223
K++ +A + + GGR+ D + +HF+ EFK KY I+ NP+A+ R+LT EKLKK +SAN
Sbjct: 224 KVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSAN 283
Query: 224 STKLPFGIECFMNDIDVKGEMCRSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEI 283
T PF +E MND+DV ++ R E+EEL K + E V + + L ++KL+ ++ VEI
Sbjct: 284 -TNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEI 342
Query: 284 VGGSSRIPAIKGLIEKIFQKTPSTTLNQDEAVARGCALQCAMLSPAVRVRDFSVTDLQVY 343
+GG++RIP +K I + F K STTLNQDEA+A+G A CA+ SP +RVR F D+ Y
Sbjct: 343 IGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAIHSPTLRVRPFKFEDIHPY 402
Query: 344 PVVMEWDPSPNEPKDSKNFITVFPEMHAAPFSKKMTFYQNKPFAIQLYYEGNVPYPSKF- 402
V WD + + ++ + VFP + P +K +T + F++ Y P
Sbjct: 403 SVSYSWD----KQVEDEDHMEVFPAGSSFPSTKLITLNRTGDFSMAASYTDITQLPPNTP 458
Query: 403 --IGKYQINDVKPGPDNASQKVTVKVRVNMDGVIGVIAASMVEKVENSGDTESMDVENTE 460
I ++I V+ S V +K+R + G+ + A +E +E
Sbjct: 459 EQIANWEITGVQLPEGQDSVPVKLKLRCDPSGLHTIEEAYTIEDIEV------------- 505
Query: 461 EENGQKQEAGSENTENKAEKTQEGQSEDXXXXXXXXXXXVVSKTLDLTISATTHGLSPEQ 520
EE E E+ E + +K + K DLTI A T GL ++
Sbjct: 506 EEPIPLPEDAPEDAEQEFKKVTK-----------------TVKKDDLTIVAHTFGLDAKK 548
Query: 521 LNAHTELEGKMIADDKLEKERIDARNCLEEYVYDLRNKLGSEEEFALYIAADDASKLSTQ 580
LN E E +M+A DKL E D +N LEEY+Y LR KL EEE+A + + + +KL
Sbjct: 549 LNELIEKENEMLAQDKLVAETEDRKNTLEEYIYTLRGKL--EEEYAPFASDAEKTKLQGM 606
Query: 581 LDETENWLYEEGADVNKSVYISKLDELKAIGEKIRQRKVDYEEKTK 626
L++ E WLY+EG D K+ YI+K +EL ++G IR R + EE+ K
Sbjct: 607 LNKAEEWLYDEGFDSIKAKYIAKYEELASLGNIIRGRYLAKEEEKK 652
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 96/166 (57%), Gaps = 2/166 (1%)
Query: 7 IGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTVTNMKNT 66
G+D GN + +A AR GI+ + N+ S R+TPS V F +NR LG KN+ +N+KNT
Sbjct: 7 FGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNT 66
Query: 67 IHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQITAMLLT 126
+ KR+IG ++ P + E K + E D G +V++ E VF+ Q+ AM +
Sbjct: 67 VANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFID 126
Query: 127 KLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIASAANP 172
K+++T + + NI+D ++VP +YT +R + DAA+I + NP
Sbjct: 127 KVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARI--AGLNP 170
>pdb|2QXL|A Chain A, Crystal Structure Analysis Of Sse1, A Yeast Hsp110
pdb|2QXL|B Chain B, Crystal Structure Analysis Of Sse1, A Yeast Hsp110
Length = 658
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 168/466 (36%), Positives = 251/466 (53%), Gaps = 40/466 (8%)
Query: 164 KIIASAANPYLGGRNIDYKLAKHFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSAN 223
K++ +A + + GGR+ D + +HF+ EFK KY I+ NP+A+ R+LT EKLKK +SAN
Sbjct: 221 KVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSAN 280
Query: 224 STKLPFGIECFMNDIDVKGEMCRSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEI 283
T PF +E MND+DV ++ R E+EEL K + E V + + L ++KL+ ++ VEI
Sbjct: 281 -TNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEI 339
Query: 284 VGGSSRIPAIKGLIEKIFQKTPSTTLNQDEAVARGCALQCAMLSPAVRVRDFSVTDLQVY 343
+GG++RIP +K I + F K STTLNQDEA+A+G A CA+ SP +RVR F D+ Y
Sbjct: 340 IGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAIHSPTLRVRPFKFEDIHPY 399
Query: 344 PVVMEWDPSPNEPKDSKNFITVFPEMHAAPFSKKMTFYQNKPFAIQLYYEGNVPYPSKF- 402
V WD + + ++ + VFP + P +K +T + F++ Y P
Sbjct: 400 SVSYSWD----KQVEDEDHMEVFPAGSSFPSTKLITLNRTGDFSMAASYTDITQLPPNTP 455
Query: 403 --IGKYQINDVKPGPDNASQKVTVKVRVNMDGVIGVIAASMVEKVENSGDTESMDVENTE 460
I ++I V+ S V +K+R + G+ + A +E +E
Sbjct: 456 EQIANWEITGVQLPEGQDSVPVKLKLRCDPSGLHTIEEAYTIEDIEV------------- 502
Query: 461 EENGQKQEAGSENTENKAEKTQEGQSEDXXXXXXXXXXXVVSKTLDLTISATTHGLSPEQ 520
EE E E+ E + +K + K DLTI A T GL ++
Sbjct: 503 EEPIPLPEDAPEDAEQEFKKVTK-----------------TVKKDDLTIVAHTFGLDAKK 545
Query: 521 LNAHTELEGKMIADDKLEKERIDARNCLEEYVYDLRNKLGSEEEFALYIAADDASKLSTQ 580
LN E E +M+A DKL E D +N LEEY+Y LR KL EEE+A + + + +KL
Sbjct: 546 LNELIEKENEMLAQDKLVAETEDRKNTLEEYIYTLRGKL--EEEYAPFASDAEKTKLQGM 603
Query: 581 LDETENWLYEEGADVNKSVYISKLDELKAIGEKIRQRKVDYEEKTK 626
L++ E WLY+EG D K+ YI+K +EL ++G IR R + EE+ K
Sbjct: 604 LNKAEEWLYDEGFDSIKAKYIAKYEELASLGNIIRGRYLAKEEEKK 649
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 96/166 (57%), Gaps = 2/166 (1%)
Query: 7 IGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTVTNMKNT 66
G+D GN + +A AR GI+ + N+ S R+TPS V F +NR LG KN+ +N+KNT
Sbjct: 4 FGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNT 63
Query: 67 IHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQITAMLLT 126
+ KR+IG ++ P + E K + E D G +V++ E VF+ Q+ AM +
Sbjct: 64 VANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFID 123
Query: 127 KLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIASAANP 172
K+++T + + NI+D ++VP +YT +R + DAA+I + NP
Sbjct: 124 KVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARI--AGLNP 167
>pdb|3D2E|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
pdb|3D2E|C Chain C, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
Length = 675
Score = 262 bits (669), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 162/466 (34%), Positives = 242/466 (51%), Gaps = 58/466 (12%)
Query: 164 KIIASAANPYLGGRNIDYKLAKHFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSAN 223
K++ +A + + GGR+ D + +HF+ EFK KY I+ NP+A+ R+LT EKLKK +SAN
Sbjct: 222 KVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSAN 281
Query: 224 STKLPFGIECFMNDIDVKGEMCRSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEI 283
T PF +E ND+DV ++ R E+EEL K + E V + + L ++KL+ ++ VEI
Sbjct: 282 -TNAPFSVESVXNDVDVSSQLSREELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEI 340
Query: 284 VGGSSRIPAIKGLIEKIFQKTPSTTLNQDEAVARGCALQCAMLSPAVRVRDFSVTDLQVY 343
+GG++RIP +K I + F K STTLNQDEA+A+G A CA+ SP +RVR F D+ Y
Sbjct: 341 IGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAIHSPTLRVRPFKFEDIHPY 400
Query: 344 PVVMEWDPSPNEPKDSKNFITVFPEMHAAPFSKKMTFYQNKPFAIQLYYEGNVPYPSKF- 402
V WD + + ++ VFP + P +K +T + F+ Y P
Sbjct: 401 SVSYSWD----KQVEDEDHXEVFPAGSSFPSTKLITLNRTGDFSXAASYTDITQLPPNTP 456
Query: 403 --IGKYQINDVKPGPDNASQKVTVKVRVNMDGVIGVIAASMVEKVENSGDTESMDVENTE 460
I ++I V+ S V +K+R + G+ + A +E +E DT+++
Sbjct: 457 EQIANWEITGVQLPEGQDSVPVKLKLRCDPSGLHTIEEAYTIEDIEAGSDTKTV------ 510
Query: 461 EENGQKQEAGSENTENKAEKTQEGQSEDXXXXXXXXXXXVVSKTLDLTISATTHGLSPEQ 520
K DLTI A T GL ++
Sbjct: 511 ------------------------------------------KKDDLTIVAHTFGLDAKK 528
Query: 521 LNAHTELEGKMIADDKLEKERIDARNCLEEYVYDLRNKLGSEEEFALYIAADDASKLSTQ 580
LN E E + +A DKL E D +N LEEY+Y LR KL EEE+A + + + +KL
Sbjct: 529 LNELIEKENEXLAQDKLVAETEDRKNTLEEYIYTLRGKL--EEEYAPFASDAEKTKLQGX 586
Query: 581 LDETENWLYEEGADVNKSVYISKLDELKAIGEKIRQRKVDYEEKTK 626
L++ E WLY+EG D K+ YI+K +EL ++G IR R + EE+ K
Sbjct: 587 LNKAEEWLYDEGFDSIKAKYIAKYEELASLGNIIRGRYLAKEEEKK 632
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 95/166 (57%), Gaps = 2/166 (1%)
Query: 7 IGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTVTNMKNT 66
G+D GN + +A AR GI+ + N+ S R+TPS V F +NR LG KN+ +N+KNT
Sbjct: 5 FGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNT 64
Query: 67 IHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQITAMLLT 126
+ KR+IG ++ P + E K + E D G +V++ E VF+ Q+ A +
Sbjct: 65 VANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAXFID 124
Query: 127 KLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIASAANP 172
K+++T + + NI+D ++VP +YT +R + DAA+I + NP
Sbjct: 125 KVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARI--AGLNP 168
>pdb|2V7Z|A Chain A, Crystal Structure Of The 70-Kda Heat Shock Cognate Protein
From Rattus Norvegicus In Post-Atp Hydrolysis State
pdb|2V7Z|B Chain B, Crystal Structure Of The 70-Kda Heat Shock Cognate Protein
From Rattus Norvegicus In Post-Atp Hydrolysis State
Length = 543
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 150/507 (29%), Positives = 245/507 (48%), Gaps = 68/507 (13%)
Query: 1 MAGMSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTV 60
M+ +GID G + + G +E IAND R TPS VAF+D R++G AAKNQ
Sbjct: 1 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 61 TNMKNTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQI 120
N NT+ KRLIGR F D VQ ++K P+ V N G ++V+Y E + F PE++
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVV-NDAGRPKVQVEYKGETKSFYPEEV 119
Query: 121 TAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKAL--------LDAAKII------ 166
++M+LTK++E +E L +++ V++VP+++ +++R+A L+ +II
Sbjct: 120 SSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQAAKDAGTIAGLNVLRIINEPTAA 179
Query: 167 -----------------------------------------ASAANPYLGGRNIDYKLAK 185
++A + +LGG + D ++
Sbjct: 180 AIAYGLDKKVRAERNVLIFDLGGGTFDVSILTTEDGIFEVKSTAGDTHLGGEDFDNRMVN 239
Query: 186 HFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMC 245
HF EFK+K+ + N RA RL T E+ K+ +S+ ST+ I+ ID +
Sbjct: 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSS-STQASIEIDSLYEGIDFYTSIT 298
Query: 246 RSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KT 304
R+ EEL D+F ++ L +KL S IH + +VGGS+RIP I+ L++ F K
Sbjct: 299 RARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKE 358
Query: 305 PSTTLNQDEAVARGCALQCAMLS--PAVRVRDFSVTDLQVYPVVMEWDPSPNEPKDSKNF 362
+ ++N DEAVA G A+Q A+LS + V+D + D+ + +E +N
Sbjct: 359 LNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRN- 417
Query: 363 ITVFPEMHAAPFSKKMTFYQNKPFAIQLYYEGN--VPYPSKFIGKYQINDVKPGPDNASQ 420
T P F+ T+ N+P + YEG + + +GK+++ + P P Q
Sbjct: 418 -TTIPTKQTQTFT---TYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQ 473
Query: 421 KVTVKVRVNMDGVIGVIAASMVEKVEN 447
+ V ++ +G++ V A EN
Sbjct: 474 -IEVTFDIDANGILNVSAVDKSTGKEN 499
>pdb|3C7N|B Chain B, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex
Length = 554
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 150/507 (29%), Positives = 245/507 (48%), Gaps = 68/507 (13%)
Query: 1 MAGMSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTV 60
M+ +GID G + + G +E IAND R TPS VAF+D R++G AAKNQ
Sbjct: 1 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 61 TNMKNTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQI 120
N NT+ KRLIGR F D VQ ++K P+ V N G ++V+Y E + F PE++
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVV-NDAGRPKVQVEYKGETKSFYPEEV 119
Query: 121 TAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKAL--------LDAAKII------ 166
++M+LTK++E +E L +++ V++VP+++ +++R+A L+ +II
Sbjct: 120 SSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAA 179
Query: 167 -----------------------------------------ASAANPYLGGRNIDYKLAK 185
++A + +LGG + D ++
Sbjct: 180 AIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 239
Query: 186 HFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMC 245
HF EFK+K+ + N RA RL T E+ K+ +S+ ST+ I+ ID +
Sbjct: 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSS-STQASIEIDSLYEGIDFYTSIT 298
Query: 246 RSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KT 304
R+ EEL D+F ++ L +KL S IH + +VGGS+RIP I+ L++ F K
Sbjct: 299 RARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKE 358
Query: 305 PSTTLNQDEAVARGCALQCAMLS--PAVRVRDFSVTDLQVYPVVMEWDPSPNEPKDSKNF 362
+ ++N DEAVA G A+Q A+LS + V+D + D+ + +E +N
Sbjct: 359 LNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRN- 417
Query: 363 ITVFPEMHAAPFSKKMTFYQNKPFAIQLYYEGN--VPYPSKFIGKYQINDVKPGPDNASQ 420
T P F+ T+ N+P + YEG + + +GK+++ + P P Q
Sbjct: 418 -TTIPTKQTQTFT---TYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQ 473
Query: 421 KVTVKVRVNMDGVIGVIAASMVEKVEN 447
+ V ++ +G++ V A EN
Sbjct: 474 -IEVTFDIDANGILNVSAVDKSTGKEN 499
>pdb|1YUW|A Chain A, Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214A
MUTANT
Length = 554
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 150/507 (29%), Positives = 245/507 (48%), Gaps = 68/507 (13%)
Query: 1 MAGMSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTV 60
M+ +GID G + + G +E IAND R TPS VAF+D R++G AAKNQ
Sbjct: 1 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 61 TNMKNTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQI 120
N NT+ KRLIGR F D VQ ++K P+ V N G ++V+Y E + F PE++
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVV-NDAGRPKVQVEYKGETKSFYPEEV 119
Query: 121 TAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKAL--------LDAAKII------ 166
++M+LTK++E +E L +++ V++VP+++ +++R+A L+ +II
Sbjct: 120 SSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAA 179
Query: 167 -----------------------------------------ASAANPYLGGRNIDYKLAK 185
++A + +LGG + D ++
Sbjct: 180 AIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMVN 239
Query: 186 HFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMC 245
HF EFK+K+ + N RA RL T E+ K+ +S+ ST+ I+ ID +
Sbjct: 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSS-STQASIEIDSLYEGIDFYTSIT 298
Query: 246 RSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KT 304
R+ EEL D+F ++ L +KL S IH + +VGGS+RIP I+ L++ F K
Sbjct: 299 RARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKE 358
Query: 305 PSTTLNQDEAVARGCALQCAMLS--PAVRVRDFSVTDLQVYPVVMEWDPSPNEPKDSKNF 362
+ ++N DEAVA G A+Q A+LS + V+D + D+ + +E +N
Sbjct: 359 LNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRN- 417
Query: 363 ITVFPEMHAAPFSKKMTFYQNKPFAIQLYYEGN--VPYPSKFIGKYQINDVKPGPDNASQ 420
T P F+ T+ N+P + YEG + + +GK+++ + P P Q
Sbjct: 418 -TTIPTKQTQTFT---TYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQ 473
Query: 421 KVTVKVRVNMDGVIGVIAASMVEKVEN 447
+ V ++ +G++ V A EN
Sbjct: 474 -IEVTFDIDANGILNVSAVDKSTGKEN 499
>pdb|3JXU|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 1a
(Hsp70-1) Atpase Domain In Complex With Adp And
Inorganic Phosphate
Length = 409
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/382 (33%), Positives = 199/382 (52%), Gaps = 58/382 (15%)
Query: 1 MAGMSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTV 60
MA + IGID G + + G +E IAND R TPS VAF+D R++G AAKNQ
Sbjct: 23 MAKAAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 82
Query: 61 TNMKNTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQI 120
N +NT+ KRLIGR+F DP VQ ++K P+ V + D ++V Y E + F PE+I
Sbjct: 83 LNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKP-KVQVSYKGETKAFYPEEI 141
Query: 121 TAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SA 169
++M+LTK++E +E L +++ V++VP+++ +++R+A DA I +A
Sbjct: 142 SSMVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAA 201
Query: 170 ANPY--------------------------------------------LGGRNIDYKLAK 185
A Y LGG + D +L
Sbjct: 202 AIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVN 261
Query: 186 HFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMC 245
HF +EFK+K+ + N RA RL T E+ K+ +S+ ST+ I+ ID +
Sbjct: 262 HFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSS-STQASLEIDSLFEGIDFYTSIT 320
Query: 246 RSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KT 304
R+ EELC D+F + + ++ L +KL + IH + +VGGS+RIP ++ L++ F +
Sbjct: 321 RARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRD 380
Query: 305 PSTTLNQDEAVARGCALQCAML 326
+ ++N DEAVA G A+Q A+L
Sbjct: 381 LNKSINPDEAVAYGAAVQAAIL 402
>pdb|1S3X|A Chain A, The Crystal Structure Of The Human Hsp70 Atpase Domain
Length = 382
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 129/382 (33%), Positives = 199/382 (52%), Gaps = 58/382 (15%)
Query: 1 MAGMSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTV 60
MA + IGID G I + G +E IAND R TPS VAF+D R++G AAKNQ
Sbjct: 1 MAKAAAIGIDLGTTYSCIGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 61 TNMKNTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQI 120
N +NT+ KRLIGR+F DP VQ ++K P+ V + D ++V Y E + F PE+I
Sbjct: 61 LNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKP-KVQVSYKGETKAFYPEEI 119
Query: 121 TAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SA 169
++M+LTK++E +E L +++ V++VP+++ +++R+A DA I +A
Sbjct: 120 SSMVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAA 179
Query: 170 ANPY--------------------------------------------LGGRNIDYKLAK 185
A Y LGG + D +L
Sbjct: 180 AIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVN 239
Query: 186 HFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMC 245
HF +EFK+K+ + N RA RL T E+ K+ +S+ ST+ I+ ID +
Sbjct: 240 HFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSS-STQASLEIDSLFEGIDFYTSIT 298
Query: 246 RSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KT 304
R+ EELC D+F + + ++ L +KL + IH + +VGGS+RIP ++ L++ F +
Sbjct: 299 RARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRD 358
Query: 305 PSTTLNQDEAVARGCALQCAML 326
+ ++N DEAVA G A+Q A+L
Sbjct: 359 LNKSINPDEAVAYGAAVQAAIL 380
>pdb|2E8A|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In
Complex With Amp-Pnp
Length = 391
Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 128/382 (33%), Positives = 199/382 (52%), Gaps = 58/382 (15%)
Query: 1 MAGMSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTV 60
MA + IGID G + + G +E IAND R TPS VAF+D R++G AAKNQ
Sbjct: 4 MAKAAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 63
Query: 61 TNMKNTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQI 120
N +NT+ KRLIGR+F DP VQ ++K P+ V + D ++V Y E + F PE+I
Sbjct: 64 LNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKP-KVQVSYKGETKAFYPEEI 122
Query: 121 TAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SA 169
++M+LTK++E +E L +++ V++VP+++ +++R+A DA I +A
Sbjct: 123 SSMVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAA 182
Query: 170 ANPY--------------------------------------------LGGRNIDYKLAK 185
A Y LGG + D +L
Sbjct: 183 AIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVN 242
Query: 186 HFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMC 245
HF +EFK+K+ + N RA RL T E+ K+ +S+ ST+ I+ ID +
Sbjct: 243 HFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSS-STQASLEIDSLFEGIDFYTSIT 301
Query: 246 RSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KT 304
R+ EELC D+F + + ++ L +KL + IH + +VGGS+RIP ++ L++ F +
Sbjct: 302 RARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRD 361
Query: 305 PSTTLNQDEAVARGCALQCAML 326
+ ++N DEAVA G A+Q A+L
Sbjct: 362 LNKSINPDEAVAYGAAVQAAIL 383
>pdb|2E88|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In The
Apo Form
Length = 391
Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 128/382 (33%), Positives = 199/382 (52%), Gaps = 58/382 (15%)
Query: 1 MAGMSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTV 60
MA + IGID G + + G +E IAND R TPS VAF+D R++G AAKNQ
Sbjct: 4 MAKAAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 63
Query: 61 TNMKNTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQI 120
N +NT+ KRLIGR+F DP VQ ++K P+ V + D ++V Y E + F PE+I
Sbjct: 64 LNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKP-KVQVSYKGETKAFYPEEI 122
Query: 121 TAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SA 169
++M+LTK++E +E L +++ V++VP+++ +++R+A DA I +A
Sbjct: 123 SSMVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAA 182
Query: 170 ANPY--------------------------------------------LGGRNIDYKLAK 185
A Y LGG + D +L
Sbjct: 183 AIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVN 242
Query: 186 HFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMC 245
HF +EFK+K+ + N RA RL T E+ K+ +S+ ST+ I+ ID +
Sbjct: 243 HFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSS-STQASLEIDSLFEGIDFYTSIT 301
Query: 246 RSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KT 304
R+ EELC D+F + + ++ L +KL + IH + +VGGS+RIP ++ L++ F +
Sbjct: 302 RARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRD 361
Query: 305 PSTTLNQDEAVARGCALQCAML 326
+ ++N DEAVA G A+Q A+L
Sbjct: 362 LNKSINPDEAVAYGAAVQAAIL 383
>pdb|3A8Y|A Chain A, Crystal Structure Of The Complex Between The Bag5 Bd5 And
Hsp70 Nbd
pdb|3A8Y|B Chain B, Crystal Structure Of The Complex Between The Bag5 Bd5 And
Hsp70 Nbd
pdb|3ATU|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp- And Mg
Ion-Bound State
pdb|3ATV|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp-Bound And
Mg Ion-Free State
pdb|3AY9|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp-, Mg Ion-,
And K Ion- Bound State
Length = 392
Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 128/382 (33%), Positives = 199/382 (52%), Gaps = 58/382 (15%)
Query: 1 MAGMSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTV 60
MA + IGID G + + G +E IAND R TPS VAF+D R++G AAKNQ
Sbjct: 5 MAKAAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 64
Query: 61 TNMKNTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQI 120
N +NT+ KRLIGR+F DP VQ ++K P+ V + D ++V Y E + F PE+I
Sbjct: 65 LNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKP-KVQVSYKGETKAFYPEEI 123
Query: 121 TAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SA 169
++M+LTK++E +E L +++ V++VP+++ +++R+A DA I +A
Sbjct: 124 SSMVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAA 183
Query: 170 ANPY--------------------------------------------LGGRNIDYKLAK 185
A Y LGG + D +L
Sbjct: 184 AIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVN 243
Query: 186 HFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMC 245
HF +EFK+K+ + N RA RL T E+ K+ +S+ ST+ I+ ID +
Sbjct: 244 HFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSS-STQASLEIDSLFEGIDFYTSIT 302
Query: 246 RSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KT 304
R+ EELC D+F + + ++ L +KL + IH + +VGGS+RIP ++ L++ F +
Sbjct: 303 RARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRD 362
Query: 305 PSTTLNQDEAVARGCALQCAML 326
+ ++N DEAVA G A+Q A+L
Sbjct: 363 LNKSINPDEAVAYGAAVQAAIL 384
>pdb|3D2F|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70
pdb|3D2F|D Chain D, Crystal Structure Of A Complex Of Sse1p And Hsp70
Length = 382
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 128/382 (33%), Positives = 199/382 (52%), Gaps = 58/382 (15%)
Query: 1 MAGMSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTV 60
MA + IGID G + + G +E IAND R TPS VAF+D R++G AAKNQ
Sbjct: 1 MAKAAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 61 TNMKNTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQI 120
N +NT+ KRLIGR+F DP VQ ++K P+ V + D ++V Y E + F PE+I
Sbjct: 61 LNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKP-KVQVSYKGETKAFYPEEI 119
Query: 121 TAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SA 169
++M+LTK++E +E L +++ V++VP+++ +++R+A DA I +A
Sbjct: 120 SSMVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAA 179
Query: 170 ANPY--------------------------------------------LGGRNIDYKLAK 185
A Y LGG + D +L
Sbjct: 180 AIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVN 239
Query: 186 HFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMC 245
HF +EFK+K+ + N RA RL T E+ K+ +S+ ST+ I+ ID +
Sbjct: 240 HFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSS-STQASLEIDSLFEGIDFYTSIT 298
Query: 246 RSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KT 304
R+ EELC D+F + + ++ L +KL + IH + +VGGS+RIP ++ L++ F +
Sbjct: 299 RARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRD 358
Query: 305 PSTTLNQDEAVARGCALQCAML 326
+ ++N DEAVA G A+Q A+L
Sbjct: 359 LNKSINPDEAVAYGAAVQAAIL 380
>pdb|3QFU|A Chain A, Crystal Structure Of Yeast Hsp70 (BipKAR2) COMPLEXED WITH
ADP
Length = 394
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 129/379 (34%), Positives = 200/379 (52%), Gaps = 59/379 (15%)
Query: 5 SVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTVTNMK 64
+VIGID G +A + G E +AN+ R TPS VAF+D R++G AAKNQ N +
Sbjct: 19 TVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDDERLIGDAAKNQVAANPQ 78
Query: 65 NTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQITAML 124
NTI KRLIG ++ D VQ ++K LP+NV N DG ++V E +VFTPE+I+ M+
Sbjct: 79 NTIFDIKRLIGLKYNDRSVQKDIKHLPFNVV-NKDGKPAVEVSVKGEKKVFTPEEISGMI 137
Query: 125 LTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SAANPY 173
L K+++ +E L ++ V++VP+++ +A+R+A DA I +AA Y
Sbjct: 138 LGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRIVNEPTAAAIAY 197
Query: 174 -------------------------------------------LGGRNIDYKLAKHFSQE 190
LGG + DYK+ + +
Sbjct: 198 GLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQLIKA 257
Query: 191 FKQKYNIEPESNPRAFLRLLTEVEKLKKQMSAN-STKLPFGIECFMNDIDVKGEMCRSEM 249
FK+K+ I+ N +A +L E EK K+ +S+ ST++ I+ F++ ID+ + R++
Sbjct: 258 FKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIE--IDSFVDGIDLSETLTRAKF 315
Query: 250 EELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KTPSTT 308
EEL D+F+ K ++ L+ S L D+ + +VGGS+RIP ++ L+E F K S
Sbjct: 316 EELNLDLFKKTLKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKG 375
Query: 309 LNQDEAVARGCALQCAMLS 327
+N DEAVA G A+Q +LS
Sbjct: 376 INPDEAVAYGAAVQAGVLS 394
>pdb|3QFP|A Chain A, Crystal Structure Of Yeast Hsp70 (BipKAR2) ATPASE DOMAIN
pdb|3QML|A Chain A, The Structural Analysis Of Sil1-Bip Complex Reveals The
Mechanism For Sil1 To Function As A Novel Nucleotide
Exchange Factor
pdb|3QML|B Chain B, The Structural Analysis Of Sil1-Bip Complex Reveals The
Mechanism For Sil1 To Function As A Novel Nucleotide
Exchange Factor
Length = 390
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 129/379 (34%), Positives = 200/379 (52%), Gaps = 59/379 (15%)
Query: 5 SVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTVTNMK 64
+VIGID G +A + G E +AN+ R TPS VAF+D R++G AAKNQ N +
Sbjct: 15 TVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDDERLIGDAAKNQVAANPQ 74
Query: 65 NTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQITAML 124
NTI KRLIG ++ D VQ ++K LP+NV N DG ++V E +VFTPE+I+ M+
Sbjct: 75 NTIFDIKRLIGLKYNDRSVQKDIKHLPFNVV-NKDGKPAVEVSVKGEKKVFTPEEISGMI 133
Query: 125 LTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SAANPY 173
L K+++ +E L ++ V++VP+++ +A+R+A DA I +AA Y
Sbjct: 134 LGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRIVNEPTAAAIAY 193
Query: 174 -------------------------------------------LGGRNIDYKLAKHFSQE 190
LGG + DYK+ + +
Sbjct: 194 GLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQLIKA 253
Query: 191 FKQKYNIEPESNPRAFLRLLTEVEKLKKQMSAN-STKLPFGIECFMNDIDVKGEMCRSEM 249
FK+K+ I+ N +A +L E EK K+ +S+ ST++ I+ F++ ID+ + R++
Sbjct: 254 FKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIE--IDSFVDGIDLSETLTRAKF 311
Query: 250 EELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KTPSTT 308
EEL D+F+ K ++ L+ S L D+ + +VGGS+RIP ++ L+E F K S
Sbjct: 312 EELNLDLFKKTLKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKG 371
Query: 309 LNQDEAVARGCALQCAMLS 327
+N DEAVA G A+Q +LS
Sbjct: 372 INPDEAVAYGAAVQAGVLS 390
>pdb|3GDQ|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein
1-Like Atpase Domain In Complex With Adp And Inorganic
Phosphate
Length = 408
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 128/376 (34%), Positives = 196/376 (52%), Gaps = 58/376 (15%)
Query: 7 IGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTVTNMKNT 66
IGID G + + G +E IAND R TPS VAF+D R++G AAKNQ N +NT
Sbjct: 31 IGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNT 90
Query: 67 IHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQITAMLLT 126
+ KRLIGR+F DP VQ ++K P+ V N G + V Y E++ F PE+I++M+LT
Sbjct: 91 VFDAKRLIGRKFNDPVVQADMKLWPFQVI-NEGGKPKVLVSYKGENKAFYPEEISSMVLT 149
Query: 127 KLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SAANPY-- 173
KL+ET+E L +++ V++VP+++ +++R+A DA I +AA Y
Sbjct: 150 KLKETAEAFLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGL 209
Query: 174 ------------------------------------------LGGRNIDYKLAKHFSQEF 191
LGG + D +L HF +EF
Sbjct: 210 DKGGQGERHVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVSHFVEEF 269
Query: 192 KQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMCRSEMEE 251
K+K+ + N RA RL T E+ K+ +S+ ST+ I+ ID + R+ EE
Sbjct: 270 KRKHKKDISQNKRAVRRLRTACERAKRTLSS-STQANLEIDSLYEGIDFYTSITRARFEE 328
Query: 252 LCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KTPSTTLN 310
LC D+F + ++ L +K+ + IH + +VGGS+RIP ++ L++ F + + ++N
Sbjct: 329 LCADLFRGTLEPVEKALRDAKMDKAKIHDIVLVGGSTRIPKVQRLLQDYFNGRDLNKSIN 388
Query: 311 QDEAVARGCALQCAML 326
DEAVA G A+Q A+L
Sbjct: 389 PDEAVAYGAAVQAAIL 404
>pdb|1HJO|A Chain A, Atpase Domain Of Human Heat Shock 70kda Protein 1
Length = 380
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 126/378 (33%), Positives = 197/378 (52%), Gaps = 58/378 (15%)
Query: 5 SVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTVTNMK 64
+ IGID G + + G +E IAND R TPS VAF+D R++G AAKNQ N +
Sbjct: 3 AAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQ 62
Query: 65 NTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQITAML 124
NT+ KRLIGR+F DP VQ ++K P+ V + D ++V Y E + F PE+I++M+
Sbjct: 63 NTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKP-KVQVSYKGETKAFYPEEISSMV 121
Query: 125 LTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SAANPY 173
LTK++E +E L +++ V++VP+++ +++R+A DA I +AA Y
Sbjct: 122 LTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAY 181
Query: 174 --------------------------------------------LGGRNIDYKLAKHFSQ 189
LGG + D +L HF +
Sbjct: 182 GLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHFVE 241
Query: 190 EFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMCRSEM 249
EFK+K+ + N RA RL T E+ K+ +S+ ST+ I+ ID + R+
Sbjct: 242 EFKRKHKKDISQNKRAVRRLRTACERAKRTLSS-STQASLEIDSLFEGIDFYTSITRARF 300
Query: 250 EELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KTPSTT 308
EELC D+F + + ++ L +KL + IH + +VGGS+RIP ++ L++ F + + +
Sbjct: 301 EELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKS 360
Query: 309 LNQDEAVARGCALQCAML 326
+N DEAVA G A+Q A+L
Sbjct: 361 INPDEAVAYGAAVQAAIL 378
>pdb|3FE1|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 6
(Hsp70b') Atpase Domain In Complex With Adp And
Inorganic Phosphate
pdb|3FE1|B Chain B, Crystal Structure Of The Human 70kda Heat Shock Protein 6
(Hsp70b') Atpase Domain In Complex With Adp And
Inorganic Phosphate
pdb|3FE1|C Chain C, Crystal Structure Of The Human 70kda Heat Shock Protein 6
(Hsp70b') Atpase Domain In Complex With Adp And
Inorganic Phosphate
Length = 403
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 123/376 (32%), Positives = 194/376 (51%), Gaps = 58/376 (15%)
Query: 7 IGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTVTNMKNT 66
+GID G + + G +E +AND R TPS VAF+D R++G AAK+Q N NT
Sbjct: 27 VGIDLGTTYSCVGVFQQGRVEILANDQGNRTTPSYVAFTDTERLVGDAAKSQAALNPHNT 86
Query: 67 IHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQITAMLLT 126
+ KRLIGR+F D VQ ++K P+ V + G ++V Y ED+ F PE+I++M+L+
Sbjct: 87 VFDAKRLIGRKFADTTVQSDMKHWPFRVV-SEGGKPKVRVCYRGEDKTFYPEEISSMVLS 145
Query: 127 KLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SAANPY-- 173
K++ET+E L + V++VP+++ +++R+A DA I +AA Y
Sbjct: 146 KMKETAEAYLGQPVKHAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGL 205
Query: 174 ------------------------------------------LGGRNIDYKLAKHFSQEF 191
LGG + D +L HF +EF
Sbjct: 206 DRRGAGERNVLIFDLGGGTFDVSVLSIDAGVFEVKATAGDTHLGGEDFDNRLVNHFMEEF 265
Query: 192 KQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMCRSEMEE 251
++K+ + N RA RL T E+ K+ +S+ ST+ I+ +D + R+ EE
Sbjct: 266 RRKHGKDLSGNKRALRRLRTACERAKRTLSS-STQATLEIDSLFEGVDFYTSITRARFEE 324
Query: 252 LCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KTPSTTLN 310
LC D+F + + ++ L +KL + IH V +VGGS+RIP ++ L++ F K + ++N
Sbjct: 325 LCSDLFRSTLEPVEKALRDAKLDKAQIHDVVLVGGSTRIPKVQKLLQDFFNGKELNKSIN 384
Query: 311 QDEAVARGCALQCAML 326
DEAVA G A+Q A+L
Sbjct: 385 PDEAVAYGAAVQAAVL 400
>pdb|1BA1|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal
Mutant With Cys 17 Replaced By Lys
Length = 386
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 127/383 (33%), Positives = 193/383 (50%), Gaps = 58/383 (15%)
Query: 1 MAGMSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTV 60
M+ +GID G + + G +E IAND R TPS VAF+D R++G AAKNQ
Sbjct: 1 MSKGPAVGIDLGTTYSKVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 61 TNMKNTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQI 120
N NT+ KRLIGR F D VQ ++K P+ V N G ++V+Y E + F PE++
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVV-NDAGRPKVQVEYKGETKSFYPEEV 119
Query: 121 TAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SA 169
++M+LTK++E +E L +++ V++VP+++ +++R+A DA I +A
Sbjct: 120 SSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAA 179
Query: 170 ANPY--------------------------------------------LGGRNIDYKLAK 185
A Y LGG + D ++
Sbjct: 180 AIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 239
Query: 186 HFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMC 245
HF EFK+K+ + N RA RL T E+ K+ +S+ ST+ I+ ID +
Sbjct: 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSS-STQASIEIDSLYEGIDFYTSIT 298
Query: 246 RSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KT 304
R+ EEL D+F ++ L +KL S IH + +VGGS+RIP I+ L++ F K
Sbjct: 299 RARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKE 358
Query: 305 PSTTLNQDEAVARGCALQCAMLS 327
+ ++N DEAVA G A+Q A+LS
Sbjct: 359 LNKSINPDEAVAYGAAVQAAILS 381
>pdb|3CQX|A Chain A, Chaperone Complex
pdb|3CQX|B Chain B, Chaperone Complex
Length = 386
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 129/386 (33%), Positives = 194/386 (50%), Gaps = 61/386 (15%)
Query: 1 MAGMS---VIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKN 57
M MS +GID G + + G +E IAND R TPS VAF+D R++G AAKN
Sbjct: 3 MGSMSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKN 62
Query: 58 QTVTNMKNTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTP 117
Q N NT+ KRLIGR F D VQ ++K P+ V N G ++V+Y E + F P
Sbjct: 63 QVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVV-NDAGRPKVQVEYKGETKSFYP 121
Query: 118 EQITAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA---------- 167
E++++M+LTK++E +E L +++ V++VP+++ +++R+A DA I
Sbjct: 122 EEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEP 181
Query: 168 -SAANPY--------------------------------------------LGGRNIDYK 182
+AA Y LGG + D +
Sbjct: 182 TAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNR 241
Query: 183 LAKHFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKG 242
+ HF EFK+K+ + N RA RL T E+ K+ +S+ ST+ I+ ID
Sbjct: 242 MVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSS-STQASIEIDSLYEGIDFYT 300
Query: 243 EMCRSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ 302
+ R+ EEL D+F ++ L +KL S IH + +VGGS+RIP I+ L++ F
Sbjct: 301 SITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 360
Query: 303 -KTPSTTLNQDEAVARGCALQCAMLS 327
K + ++N DEAVA G A+Q A+LS
Sbjct: 361 GKELNKSINPDEAVAYGAAVQAAILS 386
>pdb|1BUP|A Chain A, T13s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 386
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 127/383 (33%), Positives = 194/383 (50%), Gaps = 58/383 (15%)
Query: 1 MAGMSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTV 60
M+ +GID G+ + + G +E IAND R TPS VAF+D R++G AAKNQ
Sbjct: 1 MSKGPAVGIDLGSTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 61 TNMKNTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQI 120
N NT+ KRLIGR F D VQ ++K P+ V N G ++V+Y E + F PE++
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVV-NDAGRPKVQVEYKGETKSFYPEEV 119
Query: 121 TAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SA 169
++M+LTK++E +E L +++ V++VP+++ +++R+A DA I +A
Sbjct: 120 SSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAA 179
Query: 170 ANPY--------------------------------------------LGGRNIDYKLAK 185
A Y LGG + D ++
Sbjct: 180 AIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 239
Query: 186 HFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMC 245
HF EFK+K+ + N RA RL T E+ K+ +S+ ST+ I+ ID +
Sbjct: 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSS-STQASIEIDSLYEGIDFYTSIT 298
Query: 246 RSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KT 304
R+ EEL D+F ++ L +KL S IH + +VGGS+RIP I+ L++ F K
Sbjct: 299 RARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKE 358
Query: 305 PSTTLNQDEAVARGCALQCAMLS 327
+ ++N DEAVA G A+Q A+LS
Sbjct: 359 LNKSINPDEAVAYGAAVQAAILS 381
>pdb|1ATS|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences
The Structure Of The Active Site But Is Not Essential
For Atp Hydrolysis
Length = 386
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 127/383 (33%), Positives = 193/383 (50%), Gaps = 58/383 (15%)
Query: 1 MAGMSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTV 60
M+ +GID G + + G +E IAND R TPS VAF+D R++G AAKNQ
Sbjct: 1 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 61 TNMKNTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQI 120
N NT+ KRLIGR F D VQ ++K P+ V N G ++V+Y E + F PE++
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVV-NDAGRPKVQVEYKGETKSFYPEEV 119
Query: 121 TAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SA 169
++M+LTK++E +E L +++ V++VP+++ +++R+A DA I +A
Sbjct: 120 SSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAA 179
Query: 170 ANPY--------------------------------------------LGGRNIDYKLAK 185
A Y LGG + D ++
Sbjct: 180 AIAYGLDKKVGAERNVLIFDLGGGEFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 239
Query: 186 HFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMC 245
HF EFK+K+ + N RA RL T E+ K+ +S+ ST+ I+ ID +
Sbjct: 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSS-STQASIEIDSLYEGIDFYTSIT 298
Query: 246 RSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KT 304
R+ EEL D+F ++ L +KL S IH + +VGGS+RIP I+ L++ F K
Sbjct: 299 RARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKE 358
Query: 305 PSTTLNQDEAVARGCALQCAMLS 327
+ ++N DEAVA G A+Q A+LS
Sbjct: 359 LNKSINPDEAVAYGAAVQAAILS 381
>pdb|2BUP|A Chain A, T13g Mutant Of The Atpase Fragment Of Bovine Hsc70
Length = 381
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/383 (33%), Positives = 193/383 (50%), Gaps = 58/383 (15%)
Query: 1 MAGMSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTV 60
M+ +GID G + + G +E IAND R TPS VAF+D R++G AAKNQ
Sbjct: 1 MSKGPAVGIDLGGTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 61 TNMKNTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQI 120
N NT+ KRLIGR F D VQ ++K P+ V N G ++V+Y E + F PE++
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVV-NDAGRPKVQVEYKGETKSFYPEEV 119
Query: 121 TAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SA 169
++M+LTK++E +E L +++ V++VP+++ +++R+A DA I +A
Sbjct: 120 SSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAA 179
Query: 170 ANPY--------------------------------------------LGGRNIDYKLAK 185
A Y LGG + D ++
Sbjct: 180 AIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 239
Query: 186 HFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMC 245
HF EFK+K+ + N RA RL T E+ K+ +S+ ST+ I+ ID +
Sbjct: 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSS-STQASIEIDSLYEGIDFYTSIT 298
Query: 246 RSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KT 304
R+ EEL D+F ++ L +KL S IH + +VGGS+RIP I+ L++ F K
Sbjct: 299 RARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKE 358
Query: 305 PSTTLNQDEAVARGCALQCAMLS 327
+ ++N DEAVA G A+Q A+LS
Sbjct: 359 LNKSINPDEAVAYGAAVQAAILS 381
>pdb|1NGB|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/383 (33%), Positives = 193/383 (50%), Gaps = 58/383 (15%)
Query: 1 MAGMSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTV 60
M+ +GID G + + G +E IAND R TPS VAF+D R++G AAKNQ
Sbjct: 1 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 61 TNMKNTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQI 120
N NT+ KRLIGR F D VQ ++K P+ V N G ++V+Y E + F PE++
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVV-NDAGRPKVQVEYKGETKSFYPEEV 119
Query: 121 TAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SA 169
++M+LTK++E +E L +++ V++VP+++ +++R+A DA I +A
Sbjct: 120 SSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINQPTAA 179
Query: 170 ANPY--------------------------------------------LGGRNIDYKLAK 185
A Y LGG + D ++
Sbjct: 180 AIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 239
Query: 186 HFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMC 245
HF EFK+K+ + N RA RL T E+ K+ +S+ ST+ I+ ID +
Sbjct: 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSS-STQASIEIDSLYEGIDFYTSIT 298
Query: 246 RSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KT 304
R+ EEL D+F ++ L +KL S IH + +VGGS+RIP I+ L++ F K
Sbjct: 299 RARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKE 358
Query: 305 PSTTLNQDEAVARGCALQCAMLS 327
+ ++N DEAVA G A+Q A+LS
Sbjct: 359 LNKSINPDEAVAYGAAVQAAILS 381
>pdb|1HPM|A Chain A, How Potassium Affects The Activity Of The Molecular
Chaperone Hsc70. Ii. Potassium Binds Specifically In The
Atpase Active Site
pdb|1NGI|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
pdb|1NGJ|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
pdb|3HSC|A Chain A, Three-Dimensional Structure Of The Atpase Fragment Of A
70k Heat-Shock Cognate Protein
Length = 386
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/383 (33%), Positives = 193/383 (50%), Gaps = 58/383 (15%)
Query: 1 MAGMSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTV 60
M+ +GID G + + G +E IAND R TPS VAF+D R++G AAKNQ
Sbjct: 1 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 61 TNMKNTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQI 120
N NT+ KRLIGR F D VQ ++K P+ V N G ++V+Y E + F PE++
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVV-NDAGRPKVQVEYKGETKSFYPEEV 119
Query: 121 TAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SA 169
++M+LTK++E +E L +++ V++VP+++ +++R+A DA I +A
Sbjct: 120 SSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAA 179
Query: 170 ANPY--------------------------------------------LGGRNIDYKLAK 185
A Y LGG + D ++
Sbjct: 180 AIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 239
Query: 186 HFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMC 245
HF EFK+K+ + N RA RL T E+ K+ +S+ ST+ I+ ID +
Sbjct: 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSS-STQASIEIDSLYEGIDFYTSIT 298
Query: 246 RSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KT 304
R+ EEL D+F ++ L +KL S IH + +VGGS+RIP I+ L++ F K
Sbjct: 299 RARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKE 358
Query: 305 PSTTLNQDEAVARGCALQCAMLS 327
+ ++N DEAVA G A+Q A+LS
Sbjct: 359 LNKSINPDEAVAYGAAVQAAILS 381
>pdb|1NGD|A Chain A, Structural Basis Of The 70-kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/383 (33%), Positives = 193/383 (50%), Gaps = 58/383 (15%)
Query: 1 MAGMSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTV 60
M+ +GID G + + G +E IAND R TPS VAF+D R++G AAKNQ
Sbjct: 1 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 61 TNMKNTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQI 120
N NT+ KRLIGR F D VQ ++K P+ V N G ++V+Y E + F PE++
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVV-NDAGRPKVQVEYKGETKSFYPEEV 119
Query: 121 TAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SA 169
++M+LTK++E +E L +++ V++VP+++ +++R+A DA I +A
Sbjct: 120 SSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAA 179
Query: 170 ANPY--------------------------------------------LGGRNIDYKLAK 185
A Y LGG + D ++
Sbjct: 180 AIAYGLDKKVGAERNVLIFDLGGGTFNVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 239
Query: 186 HFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMC 245
HF EFK+K+ + N RA RL T E+ K+ +S+ ST+ I+ ID +
Sbjct: 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSS-STQASIEIDSLYEGIDFYTSIT 298
Query: 246 RSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KT 304
R+ EEL D+F ++ L +KL S IH + +VGGS+RIP I+ L++ F K
Sbjct: 299 RARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKE 358
Query: 305 PSTTLNQDEAVARGCALQCAMLS 327
+ ++N DEAVA G A+Q A+LS
Sbjct: 359 LNKSINPDEAVAYGAAVQAAILS 381
>pdb|1NGF|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/383 (33%), Positives = 193/383 (50%), Gaps = 58/383 (15%)
Query: 1 MAGMSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTV 60
M+ +GID G + + G +E IAND R TPS VAF+D R++G AAKNQ
Sbjct: 1 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 61 TNMKNTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQI 120
N NT+ KRLIGR F D VQ ++K P+ V N G ++V+Y E + F PE++
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVV-NDAGRPKVQVEYKGETKSFYPEEV 119
Query: 121 TAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SA 169
++M+LTK++E +E L +++ V++VP+++ +++R+A DA I +A
Sbjct: 120 SSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAA 179
Query: 170 ANPY--------------------------------------------LGGRNIDYKLAK 185
A Y LGG + D ++
Sbjct: 180 AIAYGLDKKVGAERNVLIFNLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 239
Query: 186 HFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMC 245
HF EFK+K+ + N RA RL T E+ K+ +S+ ST+ I+ ID +
Sbjct: 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSS-STQASIEIDSLYEGIDFYTSIT 298
Query: 246 RSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KT 304
R+ EEL D+F ++ L +KL S IH + +VGGS+RIP I+ L++ F K
Sbjct: 299 RARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKE 358
Query: 305 PSTTLNQDEAVARGCALQCAMLS 327
+ ++N DEAVA G A+Q A+LS
Sbjct: 359 LNKSINPDEAVAYGAAVQAAILS 381
>pdb|1NGA|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/383 (33%), Positives = 193/383 (50%), Gaps = 58/383 (15%)
Query: 1 MAGMSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTV 60
M+ +GID G + + G +E IAND R TPS VAF+D R++G AAKNQ
Sbjct: 1 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 61 TNMKNTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQI 120
N NT+ KRLIGR F D VQ ++K P+ V N G ++V+Y E + F PE++
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVV-NDAGRPKVQVEYKGETKSFYPEEV 119
Query: 121 TAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SA 169
++M+LTK++E +E L +++ V++VP+++ +++R+A DA I +A
Sbjct: 120 SSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINSPTAA 179
Query: 170 ANPY--------------------------------------------LGGRNIDYKLAK 185
A Y LGG + D ++
Sbjct: 180 AIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 239
Query: 186 HFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMC 245
HF EFK+K+ + N RA RL T E+ K+ +S+ ST+ I+ ID +
Sbjct: 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSS-STQASIEIDSLYEGIDFYTSIT 298
Query: 246 RSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KT 304
R+ EEL D+F ++ L +KL S IH + +VGGS+RIP I+ L++ F K
Sbjct: 299 RARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKE 358
Query: 305 PSTTLNQDEAVARGCALQCAMLS 327
+ ++N DEAVA G A+Q A+LS
Sbjct: 359 LNKSINPDEAVAYGAAVQAAILS 381
>pdb|1NGC|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/383 (33%), Positives = 193/383 (50%), Gaps = 58/383 (15%)
Query: 1 MAGMSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTV 60
M+ +GID G + + G +E IAND R TPS VAF+D R++G AAKNQ
Sbjct: 1 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 61 TNMKNTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQI 120
N NT+ KRLIGR F D VQ ++K P+ V N G ++V+Y E + F PE++
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVV-NDAGRPKVQVEYKGETKSFYPEEV 119
Query: 121 TAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SA 169
++M+LTK++E +E L +++ V++VP+++ +++R+A DA I +A
Sbjct: 120 SSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAA 179
Query: 170 ANPY--------------------------------------------LGGRNIDYKLAK 185
A Y LGG + D ++
Sbjct: 180 AIAYGLDKKVGAERNVLIFDLGGGTFSVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 239
Query: 186 HFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMC 245
HF EFK+K+ + N RA RL T E+ K+ +S+ ST+ I+ ID +
Sbjct: 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSS-STQASIEIDSLYEGIDFYTSIT 298
Query: 246 RSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KT 304
R+ EEL D+F ++ L +KL S IH + +VGGS+RIP I+ L++ F K
Sbjct: 299 RARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKE 358
Query: 305 PSTTLNQDEAVARGCALQCAMLS 327
+ ++N DEAVA G A+Q A+LS
Sbjct: 359 LNKSINPDEAVAYGAAVQAAILS 381
>pdb|1NGE|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/383 (33%), Positives = 193/383 (50%), Gaps = 58/383 (15%)
Query: 1 MAGMSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTV 60
M+ +GID G + + G +E IAND R TPS VAF+D R++G AAKNQ
Sbjct: 1 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 61 TNMKNTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQI 120
N NT+ KRLIGR F D VQ ++K P+ V N G ++V+Y E + F PE++
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVV-NDAGRPKVQVEYKGETKSFYPEEV 119
Query: 121 TAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SA 169
++M+LTK++E +E L +++ V++VP+++ +++R+A DA I +A
Sbjct: 120 SSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAA 179
Query: 170 ANPY--------------------------------------------LGGRNIDYKLAK 185
A Y LGG + D ++
Sbjct: 180 AIAYGLDKKVGAERNVLIFSLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 239
Query: 186 HFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMC 245
HF EFK+K+ + N RA RL T E+ K+ +S+ ST+ I+ ID +
Sbjct: 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSS-STQASIEIDSLYEGIDFYTSIT 298
Query: 246 RSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KT 304
R+ EEL D+F ++ L +KL S IH + +VGGS+RIP I+ L++ F K
Sbjct: 299 RARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKE 358
Query: 305 PSTTLNQDEAVARGCALQCAMLS 327
+ ++N DEAVA G A+Q A+LS
Sbjct: 359 LNKSINPDEAVAYGAAVQAAILS 381
>pdb|1ATR|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences
The Structure Of The Active Site But Is Not Essential
For Atp Hydrolysis
Length = 386
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/383 (33%), Positives = 193/383 (50%), Gaps = 58/383 (15%)
Query: 1 MAGMSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTV 60
M+ +GID G + + G +E IAND R TPS VAF+D R++G AAKNQ
Sbjct: 1 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 61 TNMKNTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQI 120
N NT+ KRLIGR F D VQ ++K P+ V N G ++V+Y E + F PE++
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVV-NDAGRPKVQVEYKGETKSFYPEEV 119
Query: 121 TAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SA 169
++M+LTK++E +E L +++ V++VP+++ +++R+A DA I +A
Sbjct: 120 SSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAA 179
Query: 170 ANPY--------------------------------------------LGGRNIDYKLAK 185
A Y LGG + D ++
Sbjct: 180 AIAYGLDKKVGAERNVLIFDLGGGVFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 239
Query: 186 HFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMC 245
HF EFK+K+ + N RA RL T E+ K+ +S+ ST+ I+ ID +
Sbjct: 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSS-STQASIEIDSLYEGIDFYTSIT 298
Query: 246 RSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KT 304
R+ EEL D+F ++ L +KL S IH + +VGGS+RIP I+ L++ F K
Sbjct: 299 RARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKE 358
Query: 305 PSTTLNQDEAVARGCALQCAMLS 327
+ ++N DEAVA G A+Q A+LS
Sbjct: 359 LNKSINPDEAVAYGAAVQAAILS 381
>pdb|1BA0|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal
1nge 3
Length = 386
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/383 (33%), Positives = 193/383 (50%), Gaps = 58/383 (15%)
Query: 1 MAGMSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTV 60
M+ +GID G + + G +E IAND R TPS VAF+D R++G AAKNQ
Sbjct: 1 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 61 TNMKNTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQI 120
N NT+ KRLIGR F D VQ ++K P+ V N G ++V+Y E + F PE++
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVV-NDAGRPKVQVEYKGETKSFYPEEV 119
Query: 121 TAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SA 169
++M+LTK++E +E L +++ V++VP+++ +++R+A DA I +A
Sbjct: 120 SSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAA 179
Query: 170 ANPY--------------------------------------------LGGRNIDYKLAK 185
A Y LGG + D ++
Sbjct: 180 AIAYGLDKKVGAERNVLIFDLGGGTFKVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 239
Query: 186 HFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMC 245
HF EFK+K+ + N RA RL T E+ K+ +S+ ST+ I+ ID +
Sbjct: 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSS-STQASIEIDSLYEGIDFYTSIT 298
Query: 246 RSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KT 304
R+ EEL D+F ++ L +KL S IH + +VGGS+RIP I+ L++ F K
Sbjct: 299 RARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKE 358
Query: 305 PSTTLNQDEAVARGCALQCAMLS 327
+ ++N DEAVA G A+Q A+LS
Sbjct: 359 LNKSINPDEAVAYGAAVQAAILS 381
>pdb|2QW9|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Apo
State
pdb|2QW9|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Apo
State
pdb|2QWL|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Adp
State
pdb|2QWL|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Adp
State
pdb|2QWM|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The AdpVi
State
pdb|2QWM|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The AdpVi
State
Length = 394
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/383 (33%), Positives = 193/383 (50%), Gaps = 58/383 (15%)
Query: 1 MAGMSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTV 60
M+ +GID G + + G +E IAND R TPS VAF+D R++G AAKNQ
Sbjct: 1 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 61 TNMKNTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQI 120
N NT+ KRLIGR F D VQ ++K P+ V N G ++V+Y E + F PE++
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVV-NDAGRPKVQVEYKGETKSFYPEEV 119
Query: 121 TAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SA 169
++M+LTK++E +E L +++ V++VP+++ +++R+A DA I +A
Sbjct: 120 SSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAA 179
Query: 170 ANPY--------------------------------------------LGGRNIDYKLAK 185
A Y LGG + D ++
Sbjct: 180 AIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 239
Query: 186 HFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMC 245
HF EFK+K+ + N RA RL T E+ K+ +S+ ST+ I+ ID +
Sbjct: 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSS-STQASIEIDSLYEGIDFYTSIT 298
Query: 246 RSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KT 304
R+ EEL D+F ++ L +KL S IH + +VGGS+RIP I+ L++ F K
Sbjct: 299 RARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKE 358
Query: 305 PSTTLNQDEAVARGCALQCAMLS 327
+ ++N DEAVA G A+Q A+LS
Sbjct: 359 LNKSINPDEAVAYGAAVQAAILS 381
>pdb|3FZF|A Chain A, Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH ATP
pdb|3FZH|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZK|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZL|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZM|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3LDQ|A Chain A, Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH SMALL
MOLECULE Inhibitor
pdb|3M3Z|A Chain A, Crystal Structure Of Hsc70/bag1 In Complex With Small
Molecule Inhibitor
Length = 381
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 126/377 (33%), Positives = 191/377 (50%), Gaps = 58/377 (15%)
Query: 7 IGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTVTNMKNT 66
+GID G + + G +E IAND R TPS VAF+D R++G AAKNQ N NT
Sbjct: 7 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNT 66
Query: 67 IHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQITAMLLT 126
+ KRLIGR F D VQ ++K P+ V N G ++V+Y E + F PE++++M+LT
Sbjct: 67 VFDAKRLIGRRFDDAVVQSDMKHWPFMVV-NDAGRPKVQVEYKGETKSFYPEEVSSMVLT 125
Query: 127 KLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SAANPY-- 173
K++E +E L +++ V++VP+++ +++R+A DA I +AA Y
Sbjct: 126 KMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 185
Query: 174 ------------------------------------------LGGRNIDYKLAKHFSQEF 191
LGG + D ++ HF EF
Sbjct: 186 DKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEF 245
Query: 192 KQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMCRSEMEE 251
K+K+ + N RA RL T E+ K+ +S+ ST+ I+ ID + R+ EE
Sbjct: 246 KRKHKKDISENKRAVRRLRTACERAKRTLSS-STQASIEIDSLYEGIDFYTSITRARFEE 304
Query: 252 LCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KTPSTTLN 310
L D+F ++ L +KL S IH + +VGGS+RIP I+ L++ F K + ++N
Sbjct: 305 LNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSIN 364
Query: 311 QDEAVARGCALQCAMLS 327
DEAVA G A+Q A+LS
Sbjct: 365 PDEAVAYGAAVQAAILS 381
>pdb|2QWN|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-386aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi State
pdb|2QWO|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi Form #1
pdb|2QWP|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi Form #2
pdb|2QWQ|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The Amppnp Hydrolyzed Form
pdb|2QWR|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The Amppnp Intact Form
Length = 394
Score = 203 bits (517), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 127/383 (33%), Positives = 193/383 (50%), Gaps = 58/383 (15%)
Query: 1 MAGMSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTV 60
M+ +GID G + + G +E IAND R TPS VAF+D R++G AAKNQ
Sbjct: 1 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 61 TNMKNTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQI 120
N NT+ KRLIGR F D VQ ++K P+ V N G ++V+Y E + F PE++
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVV-NDAGRPKVQVEYKGETKSFYPEEV 119
Query: 121 TAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SA 169
++M+LTK++E +E L +++ V++VP+++ +++R+A DA I +A
Sbjct: 120 SSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLCIINEPTAA 179
Query: 170 ANPY--------------------------------------------LGGRNIDYKLAK 185
A Y LGG + D ++
Sbjct: 180 AIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 239
Query: 186 HFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMC 245
HF EFK+K+ + N RA RL T E+ K+ +S+ ST+ I+ ID +
Sbjct: 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSS-STQASIEIDSLYEGIDFYTSIT 298
Query: 246 RSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KT 304
R+ EEL D+F ++ L +KL S IH + +VGGS+RIP I+ L++ F K
Sbjct: 299 RARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKE 358
Query: 305 PSTTLNQDEAVARGCALQCAMLS 327
+ ++N DEAVA G A+Q A+LS
Sbjct: 359 LNKSINPDEAVAYGAAVQAAILS 381
>pdb|1KAZ|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71e Mutant
Length = 381
Score = 202 bits (514), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 126/383 (32%), Positives = 193/383 (50%), Gaps = 58/383 (15%)
Query: 1 MAGMSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTV 60
M+ +GID G + + G +E IAND R TPS VAF+D R++G AAKNQ
Sbjct: 1 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 61 TNMKNTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQI 120
N NT+ +RLIGR F D VQ ++K P+ V N G ++V+Y E + F PE++
Sbjct: 61 MNPTNTVFDAERLIGRRFDDAVVQSDMKHWPFMVV-NDAGRPKVQVEYKGETKSFYPEEV 119
Query: 121 TAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SA 169
++M+LTK++E +E L +++ V++VP+++ +++R+A DA I +A
Sbjct: 120 SSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAA 179
Query: 170 ANPY--------------------------------------------LGGRNIDYKLAK 185
A Y LGG + D ++
Sbjct: 180 AIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 239
Query: 186 HFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMC 245
HF EFK+K+ + N RA RL T E+ K+ +S+ ST+ I+ ID +
Sbjct: 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSS-STQASIEIDSLYEGIDFYTSIT 298
Query: 246 RSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KT 304
R+ EEL D+F ++ L +KL S IH + +VGGS+RIP I+ L++ F K
Sbjct: 299 RARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKE 358
Query: 305 PSTTLNQDEAVARGCALQCAMLS 327
+ ++N DEAVA G A+Q A+LS
Sbjct: 359 LNKSINPDEAVAYGAAVQAAILS 381
>pdb|1NGH|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 202 bits (513), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 126/383 (32%), Positives = 193/383 (50%), Gaps = 58/383 (15%)
Query: 1 MAGMSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTV 60
M+ +GI+ G + + G +E IAND R TPS VAF+D R++G AAKNQ
Sbjct: 1 MSKGPAVGINLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 61 TNMKNTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQI 120
N NT+ KRLIGR F D VQ ++K P+ V N G ++V+Y E + F PE++
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVV-NDAGRPKVQVEYKGETKSFYPEEV 119
Query: 121 TAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SA 169
++M+LTK++E +E L +++ V++VP+++ +++R+A DA I +A
Sbjct: 120 SSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAA 179
Query: 170 ANPY--------------------------------------------LGGRNIDYKLAK 185
A Y LGG + D ++
Sbjct: 180 AIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 239
Query: 186 HFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMC 245
HF EFK+K+ + N RA RL T E+ K+ +S+ ST+ I+ ID +
Sbjct: 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSS-STQASIEIDSLYEGIDFYTSIT 298
Query: 246 RSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KT 304
R+ EEL D+F ++ L +KL S IH + +VGGS+RIP I+ L++ F K
Sbjct: 299 RARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKE 358
Query: 305 PSTTLNQDEAVARGCALQCAMLS 327
+ ++N DEAVA G A+Q A+LS
Sbjct: 359 LNKSINPDEAVAYGAAVQAAILS 381
>pdb|3D2E|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
pdb|3D2E|D Chain D, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
Length = 382
Score = 202 bits (513), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 126/381 (33%), Positives = 195/381 (51%), Gaps = 58/381 (15%)
Query: 2 AGMSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTVT 61
A + IGID G + + G +E IAND R TPS VAF+D R++G AAKNQ
Sbjct: 2 AKAAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAL 61
Query: 62 NMKNTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQIT 121
N +NT+ KRLIGR+F DP VQ + K P+ V + D ++V Y E + F PE+I+
Sbjct: 62 NPQNTVFDAKRLIGRKFGDPVVQSDXKHWPFQVINDGDKP-KVQVSYKGETKAFYPEEIS 120
Query: 122 AMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SAA 170
+ +LTK +E +E L +++ V++VP+++ +++R+A DA I +AA
Sbjct: 121 SXVLTKXKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAA 180
Query: 171 NPY----------------LG----------------------------GRNIDYKLAKH 186
Y LG G + D +L H
Sbjct: 181 IAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNH 240
Query: 187 FSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMCR 246
F +EFK+K+ + N RA RL T E+ K+ +S+ ST+ I+ ID + R
Sbjct: 241 FVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSS-STQASLEIDSLFEGIDFYTSITR 299
Query: 247 SEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KTP 305
+ EELC D+F + + ++ L +KL + IH + +VGGS+RIP ++ L++ F +
Sbjct: 300 ARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDL 359
Query: 306 STTLNQDEAVARGCALQCAML 326
+ ++N DEAVA G A+Q A+L
Sbjct: 360 NKSINPDEAVAYGAAVQAAIL 380
>pdb|1KAY|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71a Mutant
Length = 381
Score = 202 bits (513), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 126/383 (32%), Positives = 192/383 (50%), Gaps = 58/383 (15%)
Query: 1 MAGMSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTV 60
M+ +GID G + + G +E IAND R TPS VAF+D R++G AAKNQ
Sbjct: 1 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 61 TNMKNTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQI 120
N NT+ RLIGR F D VQ ++K P+ V N G ++V+Y E + F PE++
Sbjct: 61 MNPTNTVFDAARLIGRRFDDAVVQSDMKHWPFMVV-NDAGRPKVQVEYKGETKSFYPEEV 119
Query: 121 TAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SA 169
++M+LTK++E +E L +++ V++VP+++ +++R+A DA I +A
Sbjct: 120 SSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAA 179
Query: 170 ANPY--------------------------------------------LGGRNIDYKLAK 185
A Y LGG + D ++
Sbjct: 180 AIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 239
Query: 186 HFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMC 245
HF EFK+K+ + N RA RL T E+ K+ +S+ ST+ I+ ID +
Sbjct: 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSS-STQASIEIDSLYEGIDFYTSIT 298
Query: 246 RSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KT 304
R+ EEL D+F ++ L +KL S IH + +VGGS+RIP I+ L++ F K
Sbjct: 299 RARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKE 358
Query: 305 PSTTLNQDEAVARGCALQCAMLS 327
+ ++N DEAVA G A+Q A+LS
Sbjct: 359 LNKSINPDEAVAYGAAVQAAILS 381
>pdb|1KAX|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71m Mutant
Length = 381
Score = 201 bits (512), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 126/383 (32%), Positives = 192/383 (50%), Gaps = 58/383 (15%)
Query: 1 MAGMSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTV 60
M+ +GID G + + G +E IAND R TPS VAF+D R++G AAKNQ
Sbjct: 1 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 61 TNMKNTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQI 120
N NT+ RLIGR F D VQ ++K P+ V N G ++V+Y E + F PE++
Sbjct: 61 MNPTNTVFDAMRLIGRRFDDAVVQSDMKHWPFMVV-NDAGRPKVQVEYKGETKSFYPEEV 119
Query: 121 TAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SA 169
++M+LTK++E +E L +++ V++VP+++ +++R+A DA I +A
Sbjct: 120 SSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAA 179
Query: 170 ANPY--------------------------------------------LGGRNIDYKLAK 185
A Y LGG + D ++
Sbjct: 180 AIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 239
Query: 186 HFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMC 245
HF EFK+K+ + N RA RL T E+ K+ +S+ ST+ I+ ID +
Sbjct: 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSS-STQASIEIDSLYEGIDFYTSIT 298
Query: 246 RSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KT 304
R+ EEL D+F ++ L +KL S IH + +VGGS+RIP I+ L++ F K
Sbjct: 299 RARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKE 358
Query: 305 PSTTLNQDEAVARGCALQCAMLS 327
+ ++N DEAVA G A+Q A+LS
Sbjct: 359 LNKSINPDEAVAYGAAVQAAILS 381
>pdb|1NGG|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/383 (32%), Positives = 192/383 (50%), Gaps = 58/383 (15%)
Query: 1 MAGMSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTV 60
M+ +GI G + + G +E IAND R TPS VAF+D R++G AAKNQ
Sbjct: 1 MSKGPAVGISLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 61 TNMKNTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQI 120
N NT+ KRLIGR F D VQ ++K P+ V N G ++V+Y E + F PE++
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVV-NDAGRPKVQVEYKGETKSFYPEEV 119
Query: 121 TAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SA 169
++M+LTK++E +E L +++ V++VP+++ +++R+A DA I +A
Sbjct: 120 SSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAA 179
Query: 170 ANPY--------------------------------------------LGGRNIDYKLAK 185
A Y LGG + D ++
Sbjct: 180 AIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 239
Query: 186 HFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMC 245
HF EFK+K+ + N RA RL T E+ K+ +S+ ST+ I+ ID +
Sbjct: 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSS-STQASIEIDSLYEGIDFYTSIT 298
Query: 246 RSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KT 304
R+ EEL D+F ++ L +KL S IH + +VGGS+RIP I+ L++ F K
Sbjct: 299 RARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKE 358
Query: 305 PSTTLNQDEAVARGCALQCAMLS 327
+ ++N DEAVA G A+Q A+LS
Sbjct: 359 LNKSINPDEAVAYGAAVQAAILS 381
>pdb|3IUC|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 5
(BipGRP78) ATPASE DOMAIN IN COMPLEX WITH ADP
pdb|3IUC|C Chain C, Crystal Structure Of The Human 70kda Heat Shock Protein 5
(BipGRP78) ATPASE DOMAIN IN COMPLEX WITH ADP
Length = 408
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 132/386 (34%), Positives = 198/386 (51%), Gaps = 71/386 (18%)
Query: 5 SVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFS-DRNRILGVAAKNQTVTNM 63
+V+GID G + + G +E IAND R TPS VAF+ + R++G AAKNQ +N
Sbjct: 27 TVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNP 86
Query: 64 KNTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVK-YLNED------RVFT 116
+NT+ KRLIGR + DP VQ ++KFLP+ V E K K Y+ D + F
Sbjct: 87 ENTVFDAKRLIGRTWNDPSVQQDIKFLPFKVVEK-------KTKPYIQVDIGGGQTKTFA 139
Query: 117 PEQITAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA--------- 167
PE+I+AM+LTK++ET+E L ++ V++VP+++ +A+R+A DA I
Sbjct: 140 PEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINE 199
Query: 168 --SAANPY-------------------------------------------LGGRNIDYK 182
+AA Y LGG + D +
Sbjct: 200 PTAAAIAYGLDKREGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQR 259
Query: 183 LAKHFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKG 242
+ +HF + +K+K + + RA +L EVEK K+ +S+ + IE F D
Sbjct: 260 VMEHFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQH-QARIEIESFYEGEDFSE 318
Query: 243 EMCRSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ 302
+ R++ EEL D+F + K ++ LE S L SDI + +VGGS+RIP I+ L+++ F
Sbjct: 319 TLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFN 378
Query: 303 -KTPSTTLNQDEAVARGCALQCAMLS 327
K PS +N DEAVA G A+Q +LS
Sbjct: 379 GKEPSRGINPDEAVAYGAAVQAGVLS 404
>pdb|1QQO|A Chain A, E175s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 126/377 (33%), Positives = 191/377 (50%), Gaps = 58/377 (15%)
Query: 7 IGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTVTNMKNT 66
+GID G + + G +E IAND R TPS VAF+D R++G AAKNQ N NT
Sbjct: 4 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNT 63
Query: 67 IHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQITAMLLT 126
+ KRLIGR F D VQ ++K P+ V N G ++V+Y E + F PE++++M+LT
Sbjct: 64 VFDAKRLIGRRFDDAVVQSDMKHWPFMVV-NDAGRPKVQVEYKGETKSFYPEEVSSMVLT 122
Query: 127 KLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SAANPY-- 173
K++E +E L +++ V++VP+++ +++R+A DA I +AA Y
Sbjct: 123 KMKEIAEAYLGATVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINSPTAAAIAYGL 182
Query: 174 --------------LG----------------------------GRNIDYKLAKHFSQEF 191
LG G + D ++ HF EF
Sbjct: 183 DKAVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEF 242
Query: 192 KQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMCRSEMEE 251
K+K+ + N RA RL T E+ K+ +S+ ST+ I+ ID + R+ EE
Sbjct: 243 KRKHKKDISENKRAVRRLRTACERAKRTLSS-STQASIEIDSLYEGIDFYTSITRARFEE 301
Query: 252 LCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KTPSTTLN 310
L D+F ++ L +KL S IH + +VGGS+RIP I+ L++ F K + ++N
Sbjct: 302 LNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSIN 361
Query: 311 QDEAVARGCALQCAMLS 327
DEAVA G A+Q A+LS
Sbjct: 362 PDEAVAYGAAVQAAILS 378
>pdb|3LDL|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Complex With Atp
pdb|3LDL|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Complex With Atp
pdb|3LDN|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Apo Form
pdb|3LDN|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Apo Form
pdb|3LDO|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 / Bip) Atpase Domain In Complex With Amppnp
pdb|3LDO|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 / Bip) Atpase Domain In Complex With Amppnp
pdb|3LDP|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Complex With Small Molecule
Inhibitor
pdb|3LDP|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Complex With Small Molecule
Inhibitor
Length = 384
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 132/386 (34%), Positives = 198/386 (51%), Gaps = 71/386 (18%)
Query: 5 SVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFS-DRNRILGVAAKNQTVTNM 63
+V+GID G + + G +E IAND R TPS VAF+ + R++G AAKNQ +N
Sbjct: 6 TVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNP 65
Query: 64 KNTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVK-YLNED------RVFT 116
+NT+ KRLIGR + DP VQ ++KFLP+ V E K K Y+ D + F
Sbjct: 66 ENTVFDAKRLIGRTWNDPSVQQDIKFLPFKVVEK-------KTKPYIQVDIGGGQTKTFA 118
Query: 117 PEQITAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA--------- 167
PE+I+AM+LTK++ET+E L ++ V++VP+++ +A+R+A DA I
Sbjct: 119 PEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINE 178
Query: 168 --SAANPY-------------------------------------------LGGRNIDYK 182
+AA Y LGG + D +
Sbjct: 179 PTAAAIAYGLDKREGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQR 238
Query: 183 LAKHFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKG 242
+ +HF + +K+K + + RA +L EVEK K+ +S+ + IE F D
Sbjct: 239 VMEHFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQH-QARIEIESFYEGEDFSE 297
Query: 243 EMCRSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ 302
+ R++ EEL D+F + K ++ LE S L SDI + +VGGS+RIP I+ L+++ F
Sbjct: 298 TLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFN 357
Query: 303 -KTPSTTLNQDEAVARGCALQCAMLS 327
K PS +N DEAVA G A+Q +LS
Sbjct: 358 GKEPSRGINPDEAVAYGAAVQAGVLS 383
>pdb|1HX1|A Chain A, Crystal Structure Of A Bag Domain In Complex With The
Hsc70 Atpase Domain
Length = 400
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 126/377 (33%), Positives = 191/377 (50%), Gaps = 58/377 (15%)
Query: 7 IGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTVTNMKNT 66
+GID G + + G +E IAND R TPS VAF+D R++G AAKNQ N NT
Sbjct: 26 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNT 85
Query: 67 IHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQITAMLLT 126
+ KRLIGR F D VQ ++K P+ V N G ++V+Y E + F PE++++M+LT
Sbjct: 86 VFDAKRLIGRRFDDAVVQSDMKHWPFMVV-NDAGRPKVQVEYKGETKSFYPEEVSSMVLT 144
Query: 127 KLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SAANPY-- 173
K++E +E L +++ V++VP+++ +++R+A DA I +AA Y
Sbjct: 145 KMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 204
Query: 174 --------------LG----------------------------GRNIDYKLAKHFSQEF 191
LG G + D ++ HF EF
Sbjct: 205 DKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEF 264
Query: 192 KQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMCRSEMEE 251
K+K+ + N RA RL T E+ K+ +S+ ST+ I+ ID + R+ EE
Sbjct: 265 KRKHKKDISENKRAVRRLRTACERAKRTLSS-STQASIEIDSLYEGIDFYTSITRARFEE 323
Query: 252 LCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KTPSTTLN 310
L D+F ++ L +KL S IH + +VGGS+RIP I+ L++ F K + ++N
Sbjct: 324 LNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSIN 383
Query: 311 QDEAVARGCALQCAMLS 327
DEAVA G A+Q A+LS
Sbjct: 384 PDEAVAYGAAVQAAILS 400
>pdb|1QQM|A Chain A, D199s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 125/377 (33%), Positives = 191/377 (50%), Gaps = 58/377 (15%)
Query: 7 IGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTVTNMKNT 66
+GID G + + G +E IAND R TPS VAF+D R++G AAKNQ N NT
Sbjct: 4 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNT 63
Query: 67 IHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQITAMLLT 126
+ KRLIGR F D VQ ++K P+ V N G+ ++V+Y E + F PE++++M+LT
Sbjct: 64 VFDAKRLIGRRFDDAVVQSDMKHWPFMVV-NDAGAPKVQVEYKGETKSFYPEEVSSMVLT 122
Query: 127 KLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SAANPY-- 173
K++E +E L +++ V++VP+++ +++R+A DA I +AA Y
Sbjct: 123 KMKEIAEAYLGATVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 182
Query: 174 --------------LG----------------------------GRNIDYKLAKHFSQEF 191
LG G + D ++ HF EF
Sbjct: 183 DKAVGAERNVLIFSLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEF 242
Query: 192 KQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMCRSEMEE 251
K+ + + N RA RL T E+ K+ +S+ ST+ I+ ID + R+ EE
Sbjct: 243 KRAHAKDISENKRAVRRLRTACERAKRTLSS-STQASIEIDSLYEGIDFYTSITRARFEE 301
Query: 252 LCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KTPSTTLN 310
L D+F ++ L +KL S IH + +VGGS+RIP I+ L++ F K + ++N
Sbjct: 302 LNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSIN 361
Query: 311 QDEAVARGCALQCAMLS 327
DEAVA G A+Q A+LS
Sbjct: 362 PDEAVAYGAAVQAAILS 378
>pdb|1QQN|A Chain A, D206s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 125/377 (33%), Positives = 191/377 (50%), Gaps = 58/377 (15%)
Query: 7 IGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTVTNMKNT 66
+GID G + + G +E IAND R TPS VAF+D R++G AAKNQ N NT
Sbjct: 4 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNT 63
Query: 67 IHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQITAMLLT 126
+ KRLIGR F D VQ ++K P+ V N G+ ++V+Y E + F PE++++M+LT
Sbjct: 64 VFDAKRLIGRAFDDAVVQSDMKHWPFMVV-NDAGAPKVQVEYKGETKSFYPEEVSSMVLT 122
Query: 127 KLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SAANPY-- 173
K++E +E L +++ V++VP+++ +++R+A DA I +AA Y
Sbjct: 123 KMKEIAEAYLGATVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 182
Query: 174 --------------LGG----------------------------RNIDYKLAKHFSQEF 191
LGG + D ++ HF EF
Sbjct: 183 DKAVGAERNVLIFDLGGGTFSVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEF 242
Query: 192 KQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMCRSEMEE 251
K+ + + N RA RL T E+ K+ +S+ ST+ I+ ID + R+ EE
Sbjct: 243 KRAHAKDISENKRAVRRLATACERAKRTLSS-STQASIEIDSLYEGIDFYTSITRARFEE 301
Query: 252 LCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KTPSTTLN 310
L D+F ++ L +KL S IH + +VGGS+RIP I+ L++ F K + ++N
Sbjct: 302 LNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSIN 361
Query: 311 QDEAVARGCALQCAMLS 327
DEAVA G A+Q A+LS
Sbjct: 362 PDEAVAYGAAVQAAILS 378
>pdb|3I33|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 2
(Hsp70-2) Atpase Domain In Complex With Adp And
Inorganic Phosphate
Length = 404
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/381 (32%), Positives = 191/381 (50%), Gaps = 60/381 (15%)
Query: 4 MSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTVTNM 63
M IGID G + + G +E IAND R TPS VAF+D R++G AAKNQ N
Sbjct: 23 MPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 82
Query: 64 KNTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQITAM 123
NTI KRLIGR+F+D VQ ++K P+ V + G ++V+Y E + F PE+I++M
Sbjct: 83 TNTIFDAKRLIGRKFEDATVQSDMKHWPFRVV-SEGGKPKVQVEYKGETKTFFPEEISSM 141
Query: 124 LLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SAANP 172
+LTK++E +E L + V++VP+++ +++R+A DA I +AA
Sbjct: 142 VLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIA 201
Query: 173 Y------------------LGG----------------------------RNIDYKLAKH 186
Y LGG + D ++ H
Sbjct: 202 YGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSH 261
Query: 187 FSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMCR 246
++EFK+K+ + N RA RL T E+ K+ +S+ ST+ I+ +D + R
Sbjct: 262 LAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSS-STQASIEIDSLYEGVDFYTSITR 320
Query: 247 SEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KTP 305
+ EEL D+F + ++ L +KL I + +VGGS+RIP I+ L++ F K
Sbjct: 321 ARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKEL 380
Query: 306 STTLNQDEAVARGCALQCAML 326
+ ++N DEAVA G A+Q A+L
Sbjct: 381 NKSINPDEAVAYGAAVQAAIL 401
>pdb|3KVG|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Amppnp
pdb|3KVG|B Chain B, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Amppnp
pdb|3L4I|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Adp And Inorganic Phosphate
pdb|3L4I|B Chain B, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Adp And Inorganic Phosphate
pdb|3L6Q|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70 From
Cryptosporidium Parvum (Cgd2_20)
pdb|3L6Q|B Chain B, Crystal Structure Of The N-Terminal Domain Of Hsp70 From
Cryptosporidium Parvum (Cgd2_20)
Length = 400
Score = 192 bits (487), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 127/386 (32%), Positives = 189/386 (48%), Gaps = 66/386 (17%)
Query: 3 GMSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTVTN 62
G IGID G + R ++ + ND R TPS VAF++ R++G AAKNQ N
Sbjct: 18 GGPAIGIDLGTTYSCVGVWRNDTVDIVPNDQGNRTTPSYVAFTETERLIGDAAKNQVARN 77
Query: 63 MKNTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQITA 122
+NT+ KRLIGR+F D VQ ++ P+ V P I V YL E + F E+I+A
Sbjct: 78 PENTVFDAKRLIGRKFDDQAVQSDMTHWPFKVVRGPKDKPIISVNYLGEKKEFHAEEISA 137
Query: 123 MLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SAAN 171
M+L K++E SE L I + V++VP+++ +++R+A DA I +AA
Sbjct: 138 MVLQKMKEISEAYLGRQIKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAI 197
Query: 172 PY--------------------------------------------LGGRNIDYKLAKHF 187
Y LGG + D +L +
Sbjct: 198 AYGLDKKGTGERNVLIFDLGGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFDNRLVEFC 257
Query: 188 SQEFKQK-YNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMCR 246
Q+FK+K ++ +N RA RL T+ E+ K+ +S+ ST+ ++ ID + R
Sbjct: 258 VQDFKRKNRGMDLTTNARALRRLRTQCERAKRTLSS-STQATIELDSLYEGIDYSVAISR 316
Query: 247 SEMEELCKDVFEN----VEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ 302
+ EELC D F VEK LKD + + +H V +VGGS+RIP ++ LI++ F
Sbjct: 317 ARFEELCADYFRATLAPVEKVLKD----AGMDKRSVHDVVLVGGSTRIPKVQALIQEFFN 372
Query: 303 -KTPSTTLNQDEAVARGCALQCAMLS 327
K P +N DEAVA G A+Q A+L+
Sbjct: 373 GKEPCKAINPDEAVAYGAAVQAAILN 398
>pdb|4FSV|A Chain A, Crystal Structure Of A Heat Shock 70kda Protein 2 (Hspa2)
From Homo Sapiens At 1.80 A Resolution
Length = 387
Score = 186 bits (472), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 122/378 (32%), Positives = 185/378 (48%), Gaps = 60/378 (15%)
Query: 7 IGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTVTNMKNT 66
IGID G + + G +E IAND R TPS VAF+D R++G AAKNQ N NT
Sbjct: 8 IGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAXNPTNT 67
Query: 67 IHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQITAMLLT 126
I KRLIGR+F+D VQ + K P+ V + G ++V+Y E + F PE+I++ +LT
Sbjct: 68 IFDAKRLIGRKFEDATVQSDXKHWPFRVV-SEGGKPKVQVEYKGETKTFFPEEISSXVLT 126
Query: 127 KLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SAANPY-- 173
K +E +E L + V++VP+++ +++R+A DA I +AA Y
Sbjct: 127 KXKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYGL 186
Query: 174 ----------------LGGRNIDYKL----------------------------AKHFSQ 189
LGG D + H ++
Sbjct: 187 DKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRXVSHLAE 246
Query: 190 EFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMCRSEM 249
EFK+K+ + N RA RL T E+ K+ +S+ ST+ I+ +D + R+
Sbjct: 247 EFKRKHKKDIGPNKRAVRRLRTACERAKRTLSS-STQASIEIDSLYEGVDFYTSITRARF 305
Query: 250 EELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KTPSTT 308
EEL D+F + ++ L +KL I + +VGGS+RIP I+ L++ F K + +
Sbjct: 306 EELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKS 365
Query: 309 LNQDEAVARGCALQCAML 326
+N DEAVA G A+Q A+L
Sbjct: 366 INPDEAVAYGAAVQAAIL 383
>pdb|3GL1|A Chain A, Crystal Structure Of Atpase Domain Of Ssb1 Chaperone, A
Member Of The Hsp70 Family, From Saccharomyces
Cerevisiae
pdb|3GL1|B Chain B, Crystal Structure Of Atpase Domain Of Ssb1 Chaperone, A
Member Of The Hsp70 Family, From Saccharomyces
Cerevisiae
Length = 387
Score = 185 bits (470), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 122/379 (32%), Positives = 195/379 (51%), Gaps = 62/379 (16%)
Query: 7 IGIDFGNE-SCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTVTNMKN 65
IGID G SC A +E IAN+ R TPS VAF+ R++G AAKNQ N +N
Sbjct: 13 IGIDLGTTYSC--VATYESSVEIIANEQGNRVTPSFVAFTPEERLIGDAAKNQAALNPRN 70
Query: 66 TIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQITAMLL 125
T+ KRLIGR F D VQ ++K P+ V + DG+ I+V+YL E + F+P++I+AM+L
Sbjct: 71 TVFDAKRLIGRRFDDESVQKDMKTWPFKVI-DVDGNPVIEVQYLEETKTFSPQEISAMVL 129
Query: 126 TKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SAANPY- 173
TK++E +E + + V++VP+++ +A+R+A DA I +AA Y
Sbjct: 130 TKMKEIAEAKIGKKVEKAVITVPAYFNDAQRQATKDAGAISGLNVLRIINEPTAAAIAYG 189
Query: 174 ----------------LGG----------------------------RNIDYKLAKHFSQ 189
LGG ++ D L +HF
Sbjct: 190 LGAGKSEKERHVLIFDLGGGTFDVSLLHIAGGVYTVKSTSGNTHLGGQDFDTNLLEHFKA 249
Query: 190 EFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMCRSEM 249
EFK+K ++ + RA RL T E+ K+ +S + T+ ++ + D + + R+
Sbjct: 250 EFKKKTGLDISDDARALRRLRTAAERAKRTLS-SVTQTTVEVDSLFDGEDFESSLTRARF 308
Query: 250 EELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KTPSTT 308
E+L +F++ + ++ L+ +K++ S I V +VGGS+RIP ++ L+ F K +
Sbjct: 309 EDLNAALFKSTLEPVEQVLKDAKISKSQIDEVVLVGGSTRIPKVQKLLSDFFDGKQLEKS 368
Query: 309 LNQDEAVARGCALQCAMLS 327
+N DEAVA G A+Q A+L+
Sbjct: 369 INPDEAVAYGAAVQGAILT 387
>pdb|2KHO|A Chain A, Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAPERONE
(1-605) Complexed With Adp And Substrate
Length = 605
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 132/516 (25%), Positives = 235/516 (45%), Gaps = 81/516 (15%)
Query: 6 VIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFS-DRNRILGVAAKNQTVTNMK 64
+IGID G + +A + N R TPS +A++ D ++G AK Q VTN +
Sbjct: 4 IIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQ 63
Query: 65 NTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQITAML 124
NT+ KRLIGR F+D VQ ++ +P+ + +G ++VK + P QI+A +
Sbjct: 64 NTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVK----GQKMAPPQISAEV 119
Query: 125 LTKLRETSEIALQCNISDCVLSVPSFYTN--------AERKALLDAAKII---------- 166
L K+++T+E L +++ V++VP+++ + A R A L+ +II
Sbjct: 120 LKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAY 179
Query: 167 ----------------------------------------ASAANPYLGGRNIDYKLAKH 186
A+ + +LGG + D +L +
Sbjct: 180 GLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINY 239
Query: 187 FSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSA---NSTKLPFGIECFMNDIDVKGE 243
+EFK+ I+ ++P A RL EK K ++S+ LP+ + +
Sbjct: 240 LVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIK 299
Query: 244 MCRSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQK 303
+ R+++E L +D+ + LK L+ + L++SDI V +VGG +R+P ++ + + F K
Sbjct: 300 VTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGK 359
Query: 304 TPSTTLNQDEAVARGCALQCAMLSPAVRVRDFSVTDLQVYPVVMEWDPSPNEPKDSKNFI 363
P +N DEAVA G A+Q +L+ V+D + D+ + +E +KN
Sbjct: 360 EPRKDVNPDEAVAIGAAVQGGVLTG--DVKDVLLLDVTPLSLGIETMGGVMTTLIAKN-- 415
Query: 364 TVFPEMHAAPFSKKMTFYQNKPFAIQLYYEGNVPYPS--KFIGKYQINDVKPGPDNASQK 421
T P H+ FS T N+ +G + K +G++ ++ + P P Q
Sbjct: 416 TTIPTKHSQVFS---TAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQ- 471
Query: 422 VTVKVRVNMDGVIGVIAASMVEKVENSGDTESMDVE 457
+ V ++ DG++ V A K +NSG + + ++
Sbjct: 472 IEVTFDIDADGILHVSA-----KDKNSGKEQKITIK 502
>pdb|4B9Q|A Chain A, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
pdb|4B9Q|B Chain B, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
pdb|4B9Q|C Chain C, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
pdb|4B9Q|D Chain D, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
Length = 605
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 132/516 (25%), Positives = 231/516 (44%), Gaps = 81/516 (15%)
Query: 6 VIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFS-DRNRILGVAAKNQTVTNMK 64
+IGID G + +A + N R TPS +A++ D ++G AK Q VTN +
Sbjct: 4 IIGIDLGTTNSCVAIXDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQ 63
Query: 65 NTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQITAML 124
NT+ KRLIGR F+D VQ ++ P+ + +G ++VK + P QI+A +
Sbjct: 64 NTLFAIKRLIGRRFQDEEVQRDVSIXPFKIIAADNGDAWVEVK----GQKXAPPQISAEV 119
Query: 125 LTKLRETSEIALQCNISDCVLSVPSFYTN--------AERKALLDAAKII---------- 166
L K ++T+E L +++ V++VP+++ + A R A L+ +II
Sbjct: 120 LKKXKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAY 179
Query: 167 ----------------------------------------ASAANPYLGGRNIDYKLAKH 186
A+ + +LGG + D +L +
Sbjct: 180 GLDKGTGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINY 239
Query: 187 FSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSA---NSTKLPFGIECFMNDIDVKGE 243
+EFK+ I+ ++P A RL EK K ++S+ LP+ +
Sbjct: 240 LVEEFKKDQGIDLRNDPLAXQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHXNIK 299
Query: 244 MCRSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQK 303
+ R+++E L +D+ + LK L+ + L++SDI V +VGG +R P ++ + + F K
Sbjct: 300 VTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRXPXVQKKVAEFFGK 359
Query: 304 TPSTTLNQDEAVARGCALQCAMLSPAVRVRDFSVTDLQVYPVVMEWDPSPNEPKDSKNFI 363
P +N DEAVA G A+Q +L+ V+D + D+ + +E +KN
Sbjct: 360 EPRKDVNPDEAVAIGAAVQGGVLTG--DVKDVLLLDVTPLSLGIETXGGVXTTLIAKN-- 415
Query: 364 TVFPEMHAAPFSKKMTFYQNKPFAIQLYYEGNVPYPS--KFIGKYQINDVKPGPDNASQK 421
T P H+ FS T N+ +G + K +G++ ++ + P P Q
Sbjct: 416 TTIPTKHSQVFS---TAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGXPQ- 471
Query: 422 VTVKVRVNMDGVIGVIAASMVEKVENSGDTESMDVE 457
+ V ++ DG++ V A K +NSG + + ++
Sbjct: 472 IEVTFDIDADGILHVSA-----KDKNSGKEQKITIK 502
>pdb|1DKG|D Chain D, Crystal Structure Of The Nucleotide Exchange Factor Grpe
Bound To The Atpase Domain Of The Molecular Chaperone
Dnak
Length = 383
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 182/384 (47%), Gaps = 66/384 (17%)
Query: 6 VIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFS-DRNRILGVAAKNQTVTNMK 64
+IGID G + +A + N R TPS +A++ D ++G AK Q VTN +
Sbjct: 4 IIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQ 63
Query: 65 NTIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQITAML 124
NT+ KRLIGR F+D VQ ++ +P+ + +G ++VK + P QI+A +
Sbjct: 64 NTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVK----GQKMAPPQISAEV 119
Query: 125 LTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAKIIA-----------SAANPY 173
L K+++T+E L +++ V++VP+++ +A+R+A DA +I +AA Y
Sbjct: 120 LKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAY 179
Query: 174 ---------------LGG--------------------------------RNIDYKLAKH 186
LGG + D +L +
Sbjct: 180 GLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINY 239
Query: 187 FSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSA---NSTKLPFGIECFMNDIDVKGE 243
+EFK+ I+ ++P A RL EK K ++S+ LP+ + +
Sbjct: 240 LVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIK 299
Query: 244 MCRSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQK 303
+ R+++E L +D+ + LK L+ + L++SDI V +VGG +R+P ++ + + F K
Sbjct: 300 VTRAKLESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGK 359
Query: 304 TPSTTLNQDEAVARGCALQCAMLS 327
P +N DEAVA G A+Q +L+
Sbjct: 360 EPRKDVNPDEAVAIGAAVQGGVLT 383
>pdb|2V7Y|A Chain A, Crystal Structure Of The Molecular Chaperone Dnak From
Geobacillus Kaustophilus Hta426 In Post-Atp Hydrolysis
State
pdb|4ANI|C Chain C, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|D Chain D, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|G Chain G, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|H Chain H, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
Length = 509
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/497 (24%), Positives = 212/497 (42%), Gaps = 101/497 (20%)
Query: 6 VIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTVTNMKN 65
+IGID G + +A G ++ I N R TPS VAF + R++G AK Q +TN N
Sbjct: 4 IIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFKNGERLVGEVAKRQAITN-PN 62
Query: 66 TIHGFKRLIGREFKDPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQITAMLL 125
TI KR +G ++K +++ E + +TP++I+A++L
Sbjct: 63 TIISIKRHMGTDYK------------------------VEI----EGKQYTPQEISAIIL 94
Query: 126 TKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAK--------------------- 164
L+ +E L ++ V++VP+++ +A+R+A DA +
Sbjct: 95 QYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGRIAGLEVERIINEPTAAALAYG 154
Query: 165 --------------------------------IIASAANPYLGGRNIDYKLAKHFSQEFK 192
+ A+A + +LGG + D + + +FK
Sbjct: 155 LDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFK 214
Query: 193 QKYNIEPESNPRAFLRLLTEVEKLKKQMSA---NSTKLPFGIECFMNDIDVKGEMCRSEM 249
Q++ I+ + A RL EK KK++S LPF + ++ + R++
Sbjct: 215 QEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKF 274
Query: 250 EELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQKTPSTTL 309
EEL + E ++ L+ + L +DI V +VGGS+RIPA++ I++ K P +
Sbjct: 275 EELSAHLVERTMGPVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGV 334
Query: 310 NQDEAVARGCALQCAMLSPAVRVRDFSVTDLQVYPVVMEWDPSPNEPKDSKNFITVFPEM 369
N DE VA G A+Q +++ V+ V L V P+ + + F +
Sbjct: 335 NPDEVVAIGAAIQGGVIAGEVK----DVVLLDVTPLSLGIETM------GGVFTKLIERN 384
Query: 370 HAAPFSKKMTFY---QNKPFAIQLYYEGNVPYPS--KFIGKYQINDVKPGPDNASQKVTV 424
P SK F N+ +G P + K +G++Q+ + P P Q + V
Sbjct: 385 TTIPTSKSQVFTTAADNQTTVDIHVLQGERPMAADNKSLGRFQLTGIPPAPRGVPQ-IEV 443
Query: 425 KVRVNMDGVIGVIAASM 441
++ +G++ V A +
Sbjct: 444 TFDIDANGIVHVRAKDL 460
>pdb|4GNI|A Chain A, Structure Of The Ssz1 Atpase Bound To Atp And Magnesium
pdb|4GNI|B Chain B, Structure Of The Ssz1 Atpase Bound To Atp And Magnesium
Length = 409
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 165/389 (42%), Gaps = 70/389 (17%)
Query: 6 VIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTVTNMKN 65
VIGI FGN + IA E IAN+ R P+ +++ D + G AKN V N KN
Sbjct: 15 VIGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYVDGDEYYGQQAKNFLVRNPKN 74
Query: 66 TIHGFKRLIGREFK--DPHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQITAM 123
T+ F+ ++G++FK DP + P +N +I K + E T +I
Sbjct: 75 TVAYFRDILGQDFKSVDP-THNHASAHPQEAGDNVVFTIKDKAEEDAEPSTLTVSEIATR 133
Query: 124 LLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLD----------------AAKIIA 167
L +L + L ++ V+++P+ +T ++ AL+ AA ++A
Sbjct: 134 YLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKAALIAAAAAADLEVLQLISEPAAAVLA 193
Query: 168 SAANPY------------LGGRN----------------------------IDYKLAKHF 187
A P LGG +D L HF
Sbjct: 194 YDARPEATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKVLIDHF 253
Query: 188 SQEFKQKY--NIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMC 245
S+EF +K +P NPR+ +L E E K+ +S ST F +E ++ +D +
Sbjct: 254 SKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALS-RSTNASFSVESLIDGLDFASTIN 312
Query: 246 RSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQKT- 304
R E + + VFE + ++ ++K+ L D+ V + GG+S P I IF ++
Sbjct: 313 RLRYETIARTVFEGFNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPEST 372
Query: 305 ----PST---TLNQDEAVARGCALQCAML 326
PST LN E ARG ALQ +++
Sbjct: 373 RILAPSTDPSALNPSELQARGAALQASLI 401
>pdb|1XQS|C Chain C, Crystal Structure Of The Hspbp1 Core Domain Complexed With
The Fragment Of Hsp70 Atpase Domain
pdb|1XQS|D Chain D, Crystal Structure Of The Hspbp1 Core Domain Complexed With
The Fragment Of Hsp70 Atpase Domain
Length = 191
Score = 100 bits (249), Expect = 3e-21, Method: Composition-based stats.
Identities = 54/154 (35%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 164 KIIASAANPYLGGRNIDYKLAKHFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSAN 223
++ A+A + +LGG + D +L HF +EFK+K+ + N RA RL T E+ K+ +S+
Sbjct: 38 EVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSS- 96
Query: 224 STKLPFGIECFMNDIDVKGEMCRSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEI 283
ST+ I+ ID + R+ EELC D+F + + ++ L +KL + IH + +
Sbjct: 97 STQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVL 156
Query: 284 VGGSSRIPAIKGLIEKIFQ-KTPSTTLNQDEAVA 316
VGGS+RIP ++ L++ F + + ++N DEAVA
Sbjct: 157 VGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVA 190
>pdb|3I8B|A Chain A, The Crystal Structure Of Xylulose Kinase From
Bifidobacterium Adolescentis
Length = 515
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 244 MCRSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ- 302
+ + E L + E + + +DCLE + + I + ++GG ++ AI+ L I
Sbjct: 391 LANTTRENLARAFVEGLLCSQRDCLELIRSLGASITRILLIGGGAKSEAIRTLAPSILGX 450
Query: 303 --KTPSTTLNQDEAVARGCALQCAML 326
P+T DE VA G A Q A +
Sbjct: 451 DVTRPAT----DEYVAIGAARQAAWV 472
>pdb|3M0A|A Chain A, Crystal Structure Of Traf2:ciap2 Complex
pdb|3M0A|B Chain B, Crystal Structure Of Traf2:ciap2 Complex
pdb|3M0A|C Chain C, Crystal Structure Of Traf2:ciap2 Complex
pdb|3M0D|A Chain A, Crystal Structure Of The Traf1:traf2:ciap2 Complex
pdb|3M0D|B Chain B, Crystal Structure Of The Traf1:traf2:ciap2 Complex
Length = 66
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 616 QRKVDYEEKTKAFENIFCSIQIAQKKISMFKEGDERLNHLDAAEITVVEEKV 667
QR E+KT FENI C + ++++M E R + LD +I + KV
Sbjct: 5 QRCESLEKKTATFENIVCVLNREVERVAMTAEACSRQHRLDQDKIEALSSKV 56
>pdb|3M06|A Chain A, Crystal Structure Of Traf2
pdb|3M06|B Chain B, Crystal Structure Of Traf2
pdb|3M06|C Chain C, Crystal Structure Of Traf2
pdb|3M06|D Chain D, Crystal Structure Of Traf2
pdb|3M06|E Chain E, Crystal Structure Of Traf2
pdb|3M06|F Chain F, Crystal Structure Of Traf2
Length = 72
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 616 QRKVDYEEKTKAFENIFCSIQIAQKKISMFKEGDERLNHLDAAEITVVEEKV 667
QR E+KT FENI C + ++++M E R + LD +I + KV
Sbjct: 5 QRCESLEKKTATFENIVCVLNREVERVAMTAEACSRQHRLDQDKIEALSSKV 56
>pdb|2OP6|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein D
Precursor From C.Elegans
Length = 152
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 507 LTISATTHGLSPEQLNAHTELEGKMIADDKLEKERIDARNCLE 549
LTI+ + LSPE + K ADD+ +KE++++RN LE
Sbjct: 110 LTITNDHNRLSPEDIERMINDADKFAADDQAQKEKVESRNELE 152
>pdb|2PX0|A Chain A, Crystal Structure Of Flhf Complexed With GmppnpMG(2+)
pdb|2PX0|B Chain B, Crystal Structure Of Flhf Complexed With GmppnpMG(2+)
pdb|2PX0|C Chain C, Crystal Structure Of Flhf Complexed With GmppnpMG(2+)
pdb|2PX0|D Chain D, Crystal Structure Of Flhf Complexed With GmppnpMG(2+)
pdb|2PX0|E Chain E, Crystal Structure Of Flhf Complexed With GmppnpMG(2+)
pdb|2PX0|F Chain F, Crystal Structure Of Flhf Complexed With GmppnpMG(2+)
pdb|2PX0|G Chain G, Crystal Structure Of Flhf Complexed With GmppnpMG(2+)
pdb|2PX0|H Chain H, Crystal Structure Of Flhf Complexed With GmppnpMG(2+)
pdb|2PX3|A Chain A, Crystal Structure Of Flhf Complexed With GtpMG(2+)
pdb|3SYN|A Chain A, Crystal Structure Of Flhf In Complex With Its Activator
pdb|3SYN|B Chain B, Crystal Structure Of Flhf In Complex With Its Activator
pdb|3SYN|C Chain C, Crystal Structure Of Flhf In Complex With Its Activator
pdb|3SYN|D Chain D, Crystal Structure Of Flhf In Complex With Its Activator
Length = 296
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 68 HGFKRLIGREFKDPHVQDELK-FLPYNVSENPDGSIGIKVKYLNEDRV---FTPEQITAM 123
H F GR FKDP DELK +P+ S + KY + + F+ +
Sbjct: 185 HVFVDTAGRNFKDPQYIDELKETIPFESSIQSFLVLSATAKYEDMKHIVKRFSSVPVNQY 244
Query: 124 LLTKLRETSEIALQCNI 140
+ TK+ ET+ + NI
Sbjct: 245 IFTKIDETTSLGSVFNI 261
>pdb|3VKH|A Chain A, X-Ray Structure Of A Functional Full-Length Dynein Motor
Domain
pdb|3VKH|B Chain B, X-Ray Structure Of A Functional Full-Length Dynein Motor
Domain
Length = 3367
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
Query: 243 EMCRSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSV------EIVGGSSRIPAIKGL 296
E + ME L D+ V+K L + LE+ + A + + V EI+G S I I+
Sbjct: 300 ERIQQTMERLS-DLLGKVQKALGEYLERQRSAFARFYFVGDEDLLEIIGNSKDIIKIQKH 358
Query: 297 IEKIFQKTPSTTLNQDEAVARGCA 320
K+F + TL+ ++ G +
Sbjct: 359 FRKMFAGLANLTLDDEKTTIIGMS 382
>pdb|3VKG|A Chain A, X-Ray Structure Of An Mtbd Truncation Mutant Of Dynein
Motor Domain
pdb|3VKG|B Chain B, X-Ray Structure Of An Mtbd Truncation Mutant Of Dynein
Motor Domain
Length = 3245
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
Query: 243 EMCRSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSV------EIVGGSSRIPAIKGL 296
E + ME L D+ V+K L + LE+ + A + + V EI+G S I I+
Sbjct: 300 ERIQQTMERLS-DLLGKVQKALGEYLERQRSAFARFYFVGDEDLLEIIGNSKDIIKIQKH 358
Query: 297 IEKIFQKTPSTTLNQDEAVARGCA 320
K+F + TL+ ++ G +
Sbjct: 359 FRKMFAGLANLTLDDEKTTIIGMS 382
>pdb|3CB6|A Chain A, Crystal Structure Of The S. Pombe Peptidase Homology
Domain Of Fact Complex Subunit Spt16 (Form B)
Length = 444
Score = 29.6 bits (65), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 595 VNKSVYISKLDELK--AIGEKIRQRKVDYEEKTKAFENIFCSIQIAQKKISMF 645
VNK+ ++KL E K A I +R D EE K FE I I+ KK+ +F
Sbjct: 86 VNKANMLTKLAETKGAAADVNILKRTKDAEENKKLFEKIIEYIRATNKKVGVF 138
>pdb|2QOP|A Chain A, Crystal Structure Of The Transcriptional Regulator Acrr
From Escherichia Coli
pdb|3BCG|A Chain A, Conformational Changes Of The Acrr Regulator Reveal A
Mechanism Of Induction
pdb|3BCG|B Chain B, Conformational Changes Of The Acrr Regulator Reveal A
Mechanism Of Induction
Length = 215
Score = 29.6 bits (65), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 62/146 (42%), Gaps = 16/146 (10%)
Query: 190 EFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMCRSEM 249
E++ K+ +P S R L + L+ ++ +L +E + + GEM +
Sbjct: 76 EYQAKFPGDPLSVLREIL-----IHVLESTVTEERRRLL--MEIIFHKCEFVGEMAVVQQ 128
Query: 250 EE--LCKDVFENVEKTLKDCLEKSKLA--LSDIHSVEIVGGSSRIPAIKGLIEKIFQKTP 305
+ LC + ++ +E+TLK C+E L L + I+ G I GL+E
Sbjct: 129 AQRNLCLESYDRIEQTLKHCIEAKMLPADLMTRRAAIIMRGY-----ISGLMENWLFAPQ 183
Query: 306 STTLNQDEAVARGCALQCAMLSPAVR 331
S L ++ L+ +L P +R
Sbjct: 184 SFDLKKEARDYVAILLEMYLLCPTLR 209
>pdb|3CB5|A Chain A, Crystal Structure Of The S. Pombe Peptidase Homology
Domain Of Fact Complex Subunit Spt16 (form A)
pdb|3CB5|B Chain B, Crystal Structure Of The S. Pombe Peptidase Homology
Domain Of Fact Complex Subunit Spt16 (form A)
Length = 444
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 595 VNKSVYISKLDELK--AIGEKIRQRKVDYEEKTKAFENIFCSIQIAQKKISMF 645
VNK+ ++KL E K A I +R D EE K FE I I+ KK+ +F
Sbjct: 86 VNKANXLTKLAETKGAAADVNILKRTKDAEENKKLFEKIIEYIRATNKKVGVF 138
>pdb|1MRO|B Chain B, Methyl-Coenzyme M Reductase
pdb|1MRO|E Chain E, Methyl-Coenzyme M Reductase
pdb|1HBM|B Chain B, Methyl-Coenzyme M Reductase Enzyme Product Complex
pdb|1HBM|E Chain E, Methyl-Coenzyme M Reductase Enzyme Product Complex
pdb|1HBN|B Chain B, Methyl-Coenzyme M Reductase
pdb|1HBN|E Chain E, Methyl-Coenzyme M Reductase
pdb|1HBO|B Chain B, Methyl-Coenzyme M Reductase Mcr-Red1-Silent
pdb|1HBO|E Chain E, Methyl-Coenzyme M Reductase Mcr-Red1-Silent
pdb|1HBU|B Chain B, Methyl-Coenzyme M Reductase In The Mcr-Red1-Silent State
In Complex With Coenzyme M
pdb|1HBU|E Chain E, Methyl-Coenzyme M Reductase In The Mcr-Red1-Silent State
In Complex With Coenzyme M
pdb|3M1V|B Chain B, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M1V|E Chain E, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M2R|B Chain B, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M2R|E Chain E, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M2U|B Chain B, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M2U|E Chain E, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M2V|B Chain B, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M2V|E Chain E, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M30|B Chain B, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M30|E Chain E, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M32|B Chain B, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M32|E Chain E, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
Length = 442
Score = 29.3 bits (64), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Query: 197 IEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMCRSEMEELCKDV 256
+ P NP + + V+ +K+ ++ N GIE + V G C+ EL D+
Sbjct: 26 LSPLRNPA----IKSIVQGIKRTVAVNLE----GIENALKTAKVGGPACKIMGRELDLDI 77
Query: 257 FENVEKTLKDCLEKSKLALSDIHSVEIVGGSSR 289
N E E ++ D +VE++GG R
Sbjct: 78 VGNAESIAAAAKEMIQVTEDDDTNVELLGGGKR 110
>pdb|3POT|B Chain B, Structural Analysis Of A Ni(Iii)-Methyl Species In
Methyl-Coenzyme M Reductase From Methanothermobacter
Marburgensis
pdb|3POT|E Chain E, Structural Analysis Of A Ni(Iii)-Methyl Species In
Methyl-Coenzyme M Reductase From Methanothermobacter
Marburgensis
Length = 443
Score = 29.3 bits (64), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Query: 197 IEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMCRSEMEELCKDV 256
+ P NP + + V+ +K+ ++ N GIE + V G C+ EL D+
Sbjct: 27 LSPLRNPA----IKSIVQGIKRTVAVNLE----GIENALKTAKVGGPACKIMGRELDLDI 78
Query: 257 FENVEKTLKDCLEKSKLALSDIHSVEIVGGSSR 289
N E E ++ D +VE++GG R
Sbjct: 79 VGNAESIAAAAKEMIQVTEDDDTNVELLGGGKR 111
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.312 0.129 0.359
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,260,187
Number of Sequences: 62578
Number of extensions: 854526
Number of successful extensions: 2320
Number of sequences better than 100.0: 85
Number of HSP's better than 100.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 2015
Number of HSP's gapped (non-prelim): 155
length of query: 763
length of database: 14,973,337
effective HSP length: 106
effective length of query: 657
effective length of database: 8,340,069
effective search space: 5479425333
effective search space used: 5479425333
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)