Query psy740
Match_columns 763
No_of_seqs 335 out of 2632
Neff 8.4
Searched_HMMs 29240
Date Fri Aug 16 17:16:36 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy740.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/740hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3d2f_A Heat shock protein homo 100.0 2E-99 7E-104 885.5 61.8 590 3-647 1-653 (675)
2 4b9q_A Chaperone protein DNAK; 100.0 1.3E-86 4.5E-91 772.1 60.8 534 3-619 1-603 (605)
3 2kho_A Heat shock protein 70; 100.0 1.5E-85 5E-90 763.4 53.9 533 4-619 2-603 (605)
4 1yuw_A Heat shock cognate 71 k 100.0 6.3E-81 2.1E-85 717.9 43.0 490 1-559 1-553 (554)
5 2v7y_A Chaperone protein DNAK; 100.0 1.6E-69 5.5E-74 618.3 42.3 446 4-549 2-509 (509)
6 3i33_A Heat shock-related 70 k 100.0 1.4E-53 4.9E-58 474.6 34.8 324 3-328 22-403 (404)
7 3qfu_A 78 kDa glucose-regulate 100.0 2.4E-52 8.1E-57 463.2 34.5 321 5-327 19-394 (394)
8 4gni_A Putative heat shock pro 100.0 1.1E-51 3.9E-56 459.9 31.2 322 4-329 13-404 (409)
9 1dkg_D Molecular chaperone DNA 100.0 1.5E-50 5.2E-55 446.9 34.2 319 4-327 2-383 (383)
10 4e81_A Chaperone protein DNAK; 100.0 1.6E-31 5.3E-36 267.7 26.0 210 336-620 2-216 (219)
11 1u00_A HSC66, chaperone protei 100.0 2.3E-30 7.7E-35 262.0 27.4 207 338-620 1-213 (227)
12 1jce_A ROD shape-determining p 100.0 7.2E-31 2.5E-35 285.2 17.8 263 4-327 3-327 (344)
13 3n8e_A Stress-70 protein, mito 99.9 2.1E-25 7E-30 215.9 15.9 159 333-560 18-182 (182)
14 3h0x_A 78 kDa glucose-regulate 99.9 4.7E-22 1.6E-26 187.6 16.7 145 337-549 2-152 (152)
15 3dob_A Heat shock 70 kDa prote 99.9 6.7E-22 2.3E-26 186.1 14.5 145 337-549 2-152 (152)
16 3dqg_A Heat shock 70 kDa prote 99.9 6.8E-22 2.3E-26 185.8 11.1 144 337-549 2-151 (151)
17 2op6_A Heat shock 70 kDa prote 99.8 8.1E-21 2.8E-25 180.1 14.4 146 337-549 2-152 (152)
18 3h1q_A Ethanolamine utilizatio 99.7 2E-17 6.9E-22 173.0 17.4 159 118-323 70-272 (272)
19 2ych_A Competence protein PILM 99.7 9.9E-18 3.4E-22 183.9 9.4 268 5-324 14-373 (377)
20 1k8k_A ARP3, actin-like protei 99.7 2.8E-17 9.5E-22 182.9 11.8 176 140-325 107-387 (418)
21 2fsj_A Hypothetical protein TA 99.7 2.6E-17 9E-22 177.9 10.0 173 114-324 94-343 (346)
22 2fxu_A Alpha-actin-1, actin, a 99.7 1.2E-16 3.9E-21 175.2 11.5 261 4-324 5-348 (375)
23 4a2a_A Cell division protein F 99.6 3.5E-14 1.2E-18 156.9 20.2 137 169-326 231-394 (419)
24 1q5l_A Chaperone protein DNAK; 99.6 5.8E-15 2E-19 136.1 9.6 99 332-439 14-117 (135)
25 2zgy_A Plasmid segregation pro 99.4 6.8E-14 2.3E-18 149.7 2.0 125 168-323 191-319 (320)
26 4ehu_A Activator of 2-hydroxyi 99.3 8.3E-13 2.9E-17 138.1 4.8 74 250-327 183-256 (276)
27 1k8k_B ARP2, actin-like protei 99.3 1.6E-12 5.6E-17 143.0 6.0 168 141-324 105-363 (394)
28 3lof_A Heat shock 70 kDa prote 99.3 3.2E-11 1.1E-15 107.8 11.5 83 537-621 3-85 (113)
29 3js6_A Uncharacterized PARM pr 99.0 2.3E-09 7.9E-14 115.7 13.3 75 246-328 263-339 (355)
30 2p32_A Heat shock 70 kDa prote 99.0 7.4E-10 2.5E-14 99.9 7.8 80 538-619 13-92 (120)
31 1ud0_A HSC70, 70 kDa heat-shoc 98.8 2.2E-09 7.4E-14 95.9 5.7 78 541-620 2-79 (113)
32 4apw_A ALP12; actin-like prote 98.6 9.5E-09 3.2E-13 109.9 1.4 130 165-325 195-324 (329)
33 3qb0_A Actin-related protein 4 98.3 1E-06 3.4E-11 98.4 9.9 65 260-324 394-470 (498)
34 3dwl_A Actin-related protein 3 98.3 1.1E-07 3.7E-12 105.0 0.2 189 120-324 104-395 (427)
35 4fo0_A Actin-related protein 8 97.9 0.00042 1.4E-08 80.0 20.8 48 278-325 501-564 (593)
36 1hux_A Activator of (R)-2-hydr 96.3 0.0043 1.5E-07 63.8 6.6 48 279-326 210-257 (270)
37 3l0q_A Xylulose kinase; xlylul 96.0 0.0075 2.6E-07 68.8 7.0 83 244-330 409-494 (554)
38 4bc3_A Xylulose kinase; transf 95.9 0.01 3.6E-07 67.3 7.4 77 251-328 408-484 (538)
39 3hz6_A Xylulokinase; xylulose, 95.9 0.011 3.7E-07 66.7 7.2 52 278-330 403-455 (511)
40 3ezw_A Glycerol kinase; glycer 95.8 0.0098 3.4E-07 67.3 6.8 82 245-330 372-454 (526)
41 2itm_A Xylulose kinase, xylulo 95.8 0.0084 2.9E-07 67.2 5.9 81 245-329 357-438 (484)
42 1nbw_A Glycerol dehydratase re 95.8 0.0032 1.1E-07 69.4 2.3 77 246-323 511-604 (607)
43 2d0o_A DIOL dehydratase-reacti 95.7 0.0029 1E-07 69.5 1.9 80 243-324 507-603 (610)
44 2zf5_O Glycerol kinase; hypert 95.7 0.013 4.3E-07 66.0 7.2 80 245-329 365-444 (497)
45 3i8b_A Xylulose kinase; strain 95.7 0.014 4.9E-07 65.7 7.6 80 245-329 395-475 (515)
46 3ll3_A Gluconate kinase; xylul 95.7 0.012 4E-07 66.3 6.7 81 245-330 364-445 (504)
47 3ifr_A Carbohydrate kinase, FG 95.5 0.018 6.3E-07 64.8 7.3 81 245-330 371-452 (508)
48 3g25_A Glycerol kinase; IDP007 95.4 0.018 6E-07 64.8 6.7 82 245-330 374-456 (501)
49 3h3n_X Glycerol kinase; ATP-bi 95.4 0.019 6.5E-07 64.6 6.9 82 245-330 373-455 (506)
50 2d4w_A Glycerol kinase; alpha 95.2 0.025 8.4E-07 63.7 7.0 81 245-329 373-454 (504)
51 3jvp_A Ribulokinase; PSI-II, N 95.1 0.018 6.1E-07 65.9 5.6 79 245-328 410-490 (572)
52 2dpn_A Glycerol kinase; thermu 95.0 0.021 7.3E-07 64.0 6.0 80 245-328 368-448 (495)
53 2p3r_A Glycerol kinase; glycer 95.0 0.023 7.7E-07 64.1 6.2 82 245-330 371-453 (510)
54 4e1j_A Glycerol kinase; struct 94.9 0.013 4.5E-07 66.1 3.9 53 277-330 425-477 (520)
55 2w40_A Glycerol kinase, putati 94.9 0.034 1.2E-06 62.5 7.1 81 245-329 376-458 (503)
56 3lof_A Heat shock 70 kDa prote 94.7 0.053 1.8E-06 47.6 6.4 78 621-715 4-81 (113)
57 2uyt_A Rhamnulokinase; rhamnos 94.3 0.05 1.7E-06 60.9 6.8 77 243-324 361-438 (489)
58 2ews_A Pantothenate kinase; PA 93.6 0.12 4.3E-06 53.0 7.4 75 244-323 207-286 (287)
59 2p32_A Heat shock 70 kDa prote 90.8 0.44 1.5E-05 42.1 6.6 77 622-715 14-90 (120)
60 3h6e_A Carbohydrate kinase, FG 90.6 0.16 5.6E-06 56.5 4.4 71 251-326 363-436 (482)
61 1ud0_A HSC70, 70 kDa heat-shoc 89.7 0.78 2.7E-05 39.9 7.2 70 629-715 7-76 (113)
62 4e81_A Chaperone protein DNAK; 89.6 2.8 9.4E-05 41.1 11.8 68 626-715 146-213 (219)
63 2i7n_A Pantothenate kinase 1; 88.5 0.43 1.5E-05 50.5 5.3 46 278-323 306-358 (360)
64 1u00_A HSC66, chaperone protei 86.7 3.6 0.00012 40.6 10.6 69 625-715 142-210 (227)
65 1vhx_A Putative holliday junct 80.7 0.86 2.9E-05 41.9 2.9 23 1-24 1-23 (150)
66 3d2f_A Heat shock protein homo 79.8 4.7 0.00016 46.6 9.4 74 625-715 550-623 (675)
67 3ll3_A Gluconate kinase; xylul 79.6 1.1 3.7E-05 50.1 3.9 24 1-24 1-24 (504)
68 4b9q_A Chaperone protein DNAK; 79.3 11 0.00037 42.9 12.2 65 629-715 537-601 (605)
69 2kho_A Heat shock protein 70; 78.9 6 0.00021 45.1 9.8 67 626-714 534-600 (605)
70 2uyt_A Rhamnulokinase; rhamnos 77.6 1.1 3.8E-05 49.8 3.1 23 1-23 1-23 (489)
71 1iv0_A Hypothetical protein; r 77.4 1.4 4.8E-05 37.2 3.0 21 4-24 1-21 (98)
72 3hz6_A Xylulokinase; xylulose, 76.5 1.3 4.4E-05 49.6 3.2 24 1-24 1-25 (511)
73 1hux_A Activator of (R)-2-hydr 75.1 1.7 5.9E-05 44.1 3.5 23 1-24 1-23 (270)
74 3h6e_A Carbohydrate kinase, FG 72.7 1.5 5.3E-05 48.5 2.6 20 5-24 7-26 (482)
75 3qbx_A Anhydro-N-acetylmuramic 71.3 9.9 0.00034 40.1 8.2 67 253-324 262-335 (371)
76 3l0q_A Xylulose kinase; xlylul 71.1 2.5 8.5E-05 47.8 3.9 24 1-24 1-25 (554)
77 3i8b_A Xylulose kinase; strain 70.9 2.5 8.7E-05 47.2 3.9 22 1-22 1-23 (515)
78 3cqy_A Anhydro-N-acetylmuramic 69.4 9.9 0.00034 40.1 7.7 68 251-324 267-341 (370)
79 3h3n_X Glycerol kinase; ATP-bi 68.5 2.9 9.9E-05 46.6 3.7 24 1-24 1-25 (506)
80 3djc_A Type III pantothenate k 67.5 3.2 0.00011 41.9 3.5 71 243-323 181-253 (266)
81 4g9i_A Hydrogenase maturation 67.0 7 0.00024 45.7 6.6 63 259-326 692-760 (772)
82 1nu0_A Hypothetical protein YQ 66.8 4 0.00014 36.8 3.6 21 4-24 3-23 (138)
83 3eno_A Putative O-sialoglycopr 66.6 8.9 0.0003 40.1 6.8 68 256-328 233-306 (334)
84 3bex_A Type III pantothenate k 65.5 3.2 0.00011 41.6 2.9 24 1-25 1-24 (249)
85 3jvp_A Ribulokinase; PSI-II, N 65.5 3.3 0.00011 47.0 3.4 23 1-23 1-24 (572)
86 2ivn_A O-sialoglycoprotein end 65.0 8.3 0.00029 40.2 6.2 65 256-325 228-298 (330)
87 2zf5_O Glycerol kinase; hypert 64.0 3.5 0.00012 45.8 3.2 20 4-23 3-22 (497)
88 3ifr_A Carbohydrate kinase, FG 64.0 4.3 0.00015 45.3 3.9 21 4-24 7-27 (508)
89 3ttc_A HYPF, transcriptional r 64.0 9.5 0.00032 43.6 6.7 65 256-325 583-651 (657)
90 4bc3_A Xylulose kinase; transf 60.4 5.4 0.00019 44.8 3.9 22 3-24 9-30 (538)
91 2w40_A Glycerol kinase, putati 59.9 4.7 0.00016 44.8 3.3 21 4-24 4-24 (503)
92 2p3r_A Glycerol kinase; glycer 59.7 4.5 0.00015 45.1 3.1 21 3-23 2-22 (510)
93 4e1j_A Glycerol kinase; struct 59.2 5.1 0.00017 44.8 3.4 20 5-24 27-46 (520)
94 2dpn_A Glycerol kinase; thermu 58.9 4.5 0.00015 44.9 2.9 21 4-24 2-22 (495)
95 2e2o_A Hexokinase; acetate and 58.6 5.4 0.00018 40.8 3.3 47 277-324 239-286 (299)
96 3g25_A Glycerol kinase; IDP007 57.8 5.3 0.00018 44.4 3.3 21 4-24 6-26 (501)
97 1hjr_A Holliday junction resol 56.9 9.7 0.00033 35.1 4.3 19 4-22 1-19 (158)
98 3vth_A Hydrogenase maturation 56.5 19 0.00065 41.9 7.6 64 258-326 679-748 (761)
99 3u0c_A Invasin IPAB, 62 kDa an 56.5 1.2E+02 0.004 27.6 11.6 65 601-665 99-163 (201)
100 3ezw_A Glycerol kinase; glycer 52.7 7.2 0.00025 43.6 3.3 19 5-23 5-23 (526)
101 2ews_A Pantothenate kinase; PA 52.1 7.8 0.00027 39.6 3.1 22 4-25 20-41 (287)
102 4ep4_A Crossover junction endo 50.5 9.5 0.00032 35.5 3.1 19 4-22 1-19 (166)
103 1zc6_A Probable N-acetylglucos 48.4 10 0.00035 38.8 3.4 64 252-324 227-292 (305)
104 3ven_A O-carbamoyltransferase 48.3 28 0.00096 39.0 7.1 67 258-329 293-361 (576)
105 1hnj_A Beta-ketoacyl-acyl carr 46.2 22 0.00074 36.5 5.6 48 254-304 214-261 (317)
106 2e2o_A Hexokinase; acetate and 46.0 24 0.00081 35.8 5.8 20 4-23 2-21 (299)
107 2ch5_A NAGK protein; transfera 45.2 13 0.00045 38.7 3.7 21 4-24 6-26 (347)
108 2itm_A Xylulose kinase, xylulo 45.0 10 0.00035 41.9 2.9 18 6-23 2-19 (484)
109 3uun_A Dystrophin; triple heli 43.6 1.4E+02 0.0048 24.8 12.2 89 573-679 3-99 (119)
110 2d4w_A Glycerol kinase; alpha 42.9 12 0.00041 41.5 3.1 21 4-24 2-22 (504)
111 3vov_A Glucokinase, hexokinase 41.3 14 0.00046 37.9 3.0 21 4-24 1-21 (302)
112 3r8e_A Hypothetical sugar kina 40.6 49 0.0017 33.9 7.2 46 278-323 261-317 (321)
113 1ub7_A 3-oxoacyl-[acyl-carrier 40.3 27 0.00094 35.8 5.2 47 255-304 217-263 (322)
114 2ebd_A 3-oxoacyl-[acyl-carrier 39.8 30 0.001 35.2 5.4 47 255-304 207-253 (309)
115 1zbs_A Hypothetical protein PG 39.6 17 0.00059 36.9 3.4 68 251-325 210-280 (291)
116 2ra1_A Surface layer protein; 39.1 38 0.0013 35.4 5.7 124 576-713 102-229 (412)
117 2qm1_A Glucokinase; alpha-beta 38.6 68 0.0023 32.7 8.0 49 278-326 263-322 (326)
118 3r6n_A Desmoplakin; spectrin r 37.8 2.2E+02 0.0075 30.7 12.0 50 659-710 94-143 (450)
119 3vgl_A Glucokinase; ROK family 37.7 17 0.00057 37.6 3.0 21 4-24 2-22 (321)
120 1saz_A Probable butyrate kinas 37.7 23 0.00078 37.6 4.1 48 277-324 295-347 (381)
121 4db3_A Glcnac kinase, N-acetyl 35.6 64 0.0022 33.2 7.1 46 278-323 270-324 (327)
122 3pdy_A Plectin; cytoskeleton, 34.9 2.9E+02 0.01 25.9 14.0 49 659-709 106-154 (210)
123 1zc6_A Probable N-acetylglucos 34.7 18 0.00062 36.9 2.6 20 5-24 12-31 (305)
124 4htl_A Beta-glucoside kinase; 34.3 21 0.00071 36.4 3.0 47 278-324 238-290 (297)
125 1zxo_A Conserved hypothetical 34.1 17 0.00057 37.0 2.2 68 252-324 209-277 (291)
126 2h3g_X Biosynthetic protein; p 33.9 25 0.00086 35.4 3.5 72 244-324 180-251 (268)
127 1mzj_A Beta-ketoacylsynthase I 33.9 43 0.0015 34.6 5.5 46 256-304 229-274 (339)
128 2f9w_A Pantothenate kinase; CO 33.3 28 0.00095 35.1 3.7 22 4-25 23-45 (271)
129 1zow_A 3-oxoacyl-[acyl-carrier 33.2 43 0.0015 34.0 5.3 47 255-304 209-255 (313)
130 2iak_A Bullous pemphigoid anti 33.1 2.3E+02 0.0077 27.0 10.3 25 659-683 121-145 (224)
131 4htl_A Beta-glucoside kinase; 32.9 55 0.0019 33.1 6.0 21 3-23 3-23 (297)
132 1sz2_A Glucokinase, glucose ki 32.4 24 0.00082 36.5 3.2 20 3-22 13-32 (332)
133 3s84_A Apolipoprotein A-IV; fo 32.3 2E+02 0.0069 28.7 9.9 21 540-560 67-87 (273)
134 2gup_A ROK family protein; sug 32.2 69 0.0024 32.1 6.6 48 278-325 228-287 (292)
135 2aa4_A Mannac kinase, putative 31.5 26 0.0009 35.3 3.2 46 278-323 234-286 (289)
136 2x3e_A 3-oxoacyl-[acyl-carrier 31.5 46 0.0016 34.3 5.2 46 256-304 222-267 (331)
137 3uul_A Utrophin; spectrin repe 31.2 83 0.0028 26.4 6.1 25 659-683 3-27 (118)
138 1saz_A Probable butyrate kinas 31.2 36 0.0012 36.1 4.3 21 4-24 2-22 (381)
139 2q2r_A Glucokinase 1, putative 30.0 28 0.00095 36.7 3.2 21 3-23 28-48 (373)
140 1woq_A Inorganic polyphosphate 29.3 31 0.0011 34.4 3.3 20 4-23 12-31 (267)
141 3epq_A Putative fructokinase; 28.9 29 0.00099 35.5 3.0 22 3-24 2-23 (302)
142 2gup_A ROK family protein; sug 28.9 26 0.00088 35.4 2.6 20 4-23 4-23 (292)
143 3uul_A Utrophin; spectrin repe 28.2 2.5E+02 0.0087 23.1 15.7 88 574-679 4-99 (118)
144 3vgl_A Glucokinase; ROK family 28.1 1.1E+02 0.0036 31.3 7.3 46 278-323 253-310 (321)
145 3vov_A Glucokinase, hexokinase 28.1 85 0.0029 31.8 6.5 47 278-324 238-294 (302)
146 2aa4_A Mannac kinase, putative 27.9 47 0.0016 33.3 4.4 19 4-22 1-19 (289)
147 3zyy_X Iron-sulfur cluster bin 27.9 83 0.0028 35.6 6.7 58 240-298 498-555 (631)
148 3nuw_A 2-OXO-3-deoxygalactonat 27.3 36 0.0012 34.6 3.3 43 279-323 248-290 (295)
149 4am6_A Actin-like protein ARP8 26.9 57 0.002 37.0 5.1 78 141-223 222-346 (655)
150 1nbw_A Glycerol dehydratase re 26.0 33 0.0011 38.1 2.8 24 141-164 131-154 (607)
151 2qm1_A Glucokinase; alpha-beta 25.7 39 0.0013 34.6 3.3 20 5-24 7-26 (326)
152 4am6_A Actin-like protein ARP8 25.6 32 0.0011 39.0 2.7 25 278-302 501-525 (655)
153 1u6e_A 3-oxoacyl-[acyl-carrier 24.8 69 0.0024 32.8 5.1 45 256-303 230-274 (335)
154 4dfe_A 3-oxoacyl-[acyl-carrier 24.7 79 0.0027 32.5 5.5 48 254-304 230-277 (333)
155 1zbs_A Hypothetical protein PG 24.6 17 0.00058 36.9 0.3 19 6-24 2-20 (291)
156 3uun_A Dystrophin; triple heli 24.1 1.2E+02 0.004 25.3 5.7 22 659-680 3-24 (119)
157 3nmd_A CGMP dependent protein 24.0 1.7E+02 0.0059 22.8 5.8 43 525-570 29-71 (72)
158 1kcf_A Hypothetical 30.2 KD pr 23.7 72 0.0025 31.7 4.7 32 4-45 40-71 (258)
159 1bdg_A Hexokinase; phosphotran 23.0 43 0.0015 36.4 3.1 74 249-327 363-448 (451)
160 3htv_A D-allose kinase, alloki 22.8 1.5E+02 0.0052 30.0 7.2 47 277-323 239-297 (310)
161 2yhw_A Bifunctional UDP-N-acet 22.7 45 0.0016 34.5 3.2 21 4-24 30-50 (343)
162 1zxo_A Conserved hypothetical 22.4 13 0.00045 37.8 -1.1 20 6-25 2-21 (291)
163 1ted_A PKS18; thiolase fold, s 22.3 73 0.0025 33.7 4.8 47 255-304 284-330 (393)
164 1j3n_A 3-oxoacyl-(acyl-carrier 22.1 52 0.0018 35.1 3.5 45 258-302 275-321 (408)
165 4db3_A Glcnac kinase, N-acetyl 21.9 50 0.0017 34.0 3.3 20 4-23 24-43 (327)
166 3t9o_A DGC, diguanylate cyclas 21.7 2E+02 0.0069 25.2 6.8 63 583-645 54-121 (135)
167 2yhx_A Hexokinase B; transfera 21.3 47 0.0016 36.1 3.0 76 250-328 355-445 (457)
168 3fh3_A Putative ECF-type sigma 20.9 3.7E+02 0.013 24.2 8.0 22 514-535 34-55 (158)
169 1wlx_A Alpha-actinin 4; three- 20.7 2.2E+02 0.0074 25.0 6.5 11 651-661 94-104 (129)
170 3kbt_A Beta-I spectrin, spectr 20.7 6.3E+02 0.021 25.1 15.9 23 659-681 218-240 (326)
171 3s21_A 3-oxoacyl-[ACP] synthas 20.2 1.1E+02 0.0038 31.5 5.6 50 252-304 240-289 (345)
172 3epq_A Putative fructokinase; 20.2 1.8E+02 0.0062 29.3 7.1 48 277-324 224-288 (302)
173 2hoe_A N-acetylglucosamine kin 20.0 1.4E+02 0.0048 31.2 6.4 46 278-323 315-369 (380)
No 1
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=2e-99 Score=885.50 Aligned_cols=590 Identities=37% Similarity=0.618 Sum_probs=531.5
Q ss_pred CcceEEEEcCccceEEEEEECCceeEEcCCCCCccccEEEEeeCCceEEcHHHHHhHhhccCchHHHhhhhhCCCCCChH
Q psy740 3 GMSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTVTNMKNTIHGFKRLIGREFKDPH 82 (763)
Q Consensus 3 ~~~viGID~GTt~s~va~~~~g~~~iv~n~~~~r~~PS~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~KrllG~~~~d~~ 82 (763)
||++||||||||||+||++.+|++++|.|+.|+|.|||+|+|.+++++||..|+.++..+|.++++++|||||+.++++.
T Consensus 1 Mm~~iGIDlGTtns~va~~~~g~~~ii~n~~g~r~tPS~Vaf~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~ 80 (675)
T 3d2f_A 1 MSTPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPD 80 (675)
T ss_dssp -CCCEEEECCSSEEEEEEEETTEEEEECCTTSCSSEECCEEECSSSEEETHHHHHHHTTCGGGEECCHHHHTTCBTTCTT
T ss_pred CCcEEEEEcCCCcEEEEEEECCeeEEEECCCCCcccceEEEECCCcEEecHHHHHhhhhChHhHHHHHHHHhCCCCCcHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhcCCceeeeCCCCCeEEEEEecCCceeeCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecccCCHHHHHHHHHH
Q psy740 83 VQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQITAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDA 162 (763)
Q Consensus 83 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~peev~a~~L~~lk~~ae~~~~~~v~~~VITVPa~f~~~qR~al~~A 162 (763)
++.+.+++||.++...+|.+.+.+.+.|+...++|++|++++|++|+..|+.++|..+.++|||||+||++.||+++++|
T Consensus 81 v~~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~A 160 (675)
T 3d2f_A 81 FEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADA 160 (675)
T ss_dssp HHHHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHH
Confidence 99999999999999889999999988887788999999999999999999999999999999999999999999999999
Q ss_pred Hh------------------------------------------------------------HhhhcCCCCCchhHHHHH
Q psy740 163 AK------------------------------------------------------------IIASAANPYLGGRNIDYK 182 (763)
Q Consensus 163 a~------------------------------------------------------------vl~~~~d~~lGG~d~D~~ 182 (763)
++ |++++||.+|||++||+.
T Consensus 161 a~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~ 240 (675)
T 3d2f_A 161 ARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLA 240 (675)
T ss_dssp HHHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHH
T ss_pred HHHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHH
Confidence 98 455677889999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHhccCCCceeeEEeeccccCcccEEEeeHHHHHHHhHHHHHHHHH
Q psy740 183 LAKHFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMCRSEMEELCKDVFENVEK 262 (763)
Q Consensus 183 l~~~~~~~~~~~~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~~~~~ie~l~~~~d~~~~itr~~fe~l~~~l~~~i~~ 262 (763)
|++||.++|.++|++++..+++++.||+.+||++|+.||.+. .+.+.+++++++.++.++|||++|+++|+|+++++..
T Consensus 241 l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~-~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~i~~ 319 (675)
T 3d2f_A 241 ITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANT-NAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTE 319 (675)
T ss_dssp HHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCS-EEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHTTTTH
T ss_pred HHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCC-ceEEEEeeeccCceEEEEEeHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999876 5788999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcCCCCCCCCChhHHHHhHHHHHcchhcCCccccccEEEEecc
Q psy740 263 TLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQKTPSTTLNQDEAVARGCALQCAMLSPAVRVRDFSVTDLQV 342 (763)
Q Consensus 263 ~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg~~~~~~~n~deaVa~GAa~~aa~ls~~~~~~~~~~~d~~~ 342 (763)
+|+++|+.+++.+.+|+.|+||||+||+|+|+++|+++||.++..++||++|||+|||++|++|++.++++++.+.|++|
T Consensus 320 ~i~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAa~~a~~ls~~~~v~~~~l~Dv~p 399 (675)
T 3d2f_A 320 PVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAIHSPTLRVRPFKFEDIHP 399 (675)
T ss_dssp HHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHHTSCEECCSCTTTHHHHHHHHHHHHTCSSCCCCCCEEEEEEC
T ss_pred HHHHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhcCCCccccCCcchHHHHHHHHHHHHhCCCCcccceEEEeeee
Confidence 99999999999999999999999999999999999999999888999999999999999999999999999999999999
Q ss_pred cceEEEecCCCCCCCCCCceEEEecCCCCcCceEEEEeeeCCCEEEEEEEecC--cCC-CCcccceEEeeccCCCCCCCc
Q psy740 343 YPVVMEWDPSPNEPKDSKNFITVFPEMHAAPFSKKMTFYQNKPFAIQLYYEGN--VPY-PSKFIGKYQINDVKPGPDNAS 419 (763)
Q Consensus 343 ~~i~i~~~~~~~~~~~~~~~~~l~~~~~~iP~~k~~~f~~~~~~~i~i~~~~~--~~~-~~~~ig~~~i~~i~~~~~g~~ 419 (763)
|+|||+|.+....+ ...+||++|++||++++.+|++.+++.+.++|+++ ++. +|..||+|.|.||+|.++|.+
T Consensus 400 ~slgi~~~~~~~~~----~~~~li~rnt~iP~~k~~~f~~~~~~~~~~~~~ge~~~~~~~n~~lg~f~l~gi~~~~~g~~ 475 (675)
T 3d2f_A 400 YSVSYSWDKQVEDE----DHMEVFPAGSSFPSTKLITLNRTGDFSMAASYTDITQLPPNTPEQIANWEITGVQLPEGQDS 475 (675)
T ss_dssp SCEEEEECCTTCSC----SEEEEECTTEEESEEEEEEEEESSCEEEEEEESCGGGSCTTCCSEEEEEEEECCCCCSSCSC
T ss_pred cceEeeecCCCCCc----ceEEEEcCCCCCCcccceeeeecCCceEEEEEcCCcccccccCceeeEEEecCcCCCCCCCc
Confidence 99999997632111 46799999999999999999999999999988544 666 899999999999999999987
Q ss_pred ceEEEEEEEcCCccEEEEEeeeeEeeccCCCCCCCcccccccccccccccCCccccccccccccCCcchhHhHHHhhhcc
Q psy740 420 QKVTVKVRVNMDGVIGVIAASMVEKVENSGDTESMDVENTEEENGQKQEAGSENTENKAEKTQEGQSEDAEKKAAEAKKK 499 (763)
Q Consensus 420 ~~i~v~~~vd~~Gil~v~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~K 499 (763)
.+|+|+|.+|.||+|+|+++.+++..+.+ +.|
T Consensus 476 ~~i~v~f~id~~Gil~V~a~~~~~~~~~~------------------------------------------------~~~ 507 (675)
T 3d2f_A 476 VPVKLKLRCDPSGLHTIEEAYTIEDIEAG------------------------------------------------SDT 507 (675)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEECC------------------------------------------------------C
T ss_pred ceEEEEEEEcCCCcEEEEEEEEeeccccc------------------------------------------------ccc
Confidence 67999999999999999998765432100 123
Q ss_pred ccceeeeeeEeecCCCCCHHHHHHHHHHHHhhhhchHHHHHHHHHhhhhHHHHHHHHHHccchHHhhccCCHHHHHHHHH
Q psy740 500 VVSKTLDLTISATTHGLSPEQLNAHTELEGKMIADDKLEKERIDARNCLEEYVYDLRNKLGSEEEFALYIAADDASKLST 579 (763)
Q Consensus 500 ~~~k~~~~~i~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~ea~N~LEs~iy~~R~~L~~~~~~~~~~teeer~~l~~ 579 (763)
.+.+...++|+....+||.++++++++++.+|..+|+.++++.+++|+||+|||++|++|. +.|..++++++|+.|..
T Consensus 508 ~t~~~~~i~i~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~~~n~le~~i~~~~~~l~--~~~~~~~~~~~~~~~~~ 585 (675)
T 3d2f_A 508 KTVKKDDLTIVAHTFGLDAKKLNELIEKENEMLAQDKLVAETEDRKNTLEEYIYTLRGKLE--EEYAPFASDAEKTKLQG 585 (675)
T ss_dssp CCCEEEECEEEEECSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TTTGGGSCHHHHHHHHH
T ss_pred cCcceeeEEEecCCCCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhhCCHHHHHHHHH
Confidence 3466777888876668999999999999999999999999999999999999999999997 35899999999999999
Q ss_pred HHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhc
Q psy740 580 QLDETENWLYEEGADVNKSVYISKLDELKAIGEKIRQRKVDYEEKTKAFENIFCSIQIAQKKISMFKE 647 (763)
Q Consensus 580 ~l~e~~~WL~~~g~~a~~~~~~~kl~eL~~~~~pi~~R~~E~~~rp~a~~~l~~~l~~~~~~l~~~~~ 647 (763)
.|+++++|||++|+++++++|++|+++|+++++||..|+.|+..||.+++.|++.|+.++++++.+..
T Consensus 586 ~l~~~~~wl~~~~~~~~~~~~~~~~~~l~~~~~~i~~r~~e~~~rp~~~~~~~~~~~~~~~~~~~~~~ 653 (675)
T 3d2f_A 586 MLNKAEEWLYDEGFDSIKAKYIAKYEELASLGNIIRGRYLAKEEEKKQAIRSKQEASQMAAMAEKLAA 653 (675)
T ss_dssp HHHHHHHHTTTGGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----------------
T ss_pred HHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888899999999999999999999999999999999999999999999999877643
No 2
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=1.3e-86 Score=772.12 Aligned_cols=534 Identities=27% Similarity=0.447 Sum_probs=491.7
Q ss_pred CcceEEEEcCccceEEEEEECCceeEEcCCCCCccccEEEEeeC-CceEEcHHHHHhHhhccCchHHHhhhhhCCCCCCh
Q psy740 3 GMSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSD-RNRILGVAAKNQTVTNMKNTIHGFKRLIGREFKDP 81 (763)
Q Consensus 3 ~~~viGID~GTt~s~va~~~~g~~~iv~n~~~~r~~PS~V~~~~-~~~~~G~~A~~~~~~~p~~~~~~~KrllG~~~~d~ 81 (763)
|+.+||||||||||+||++.+|.++++.|..|.|.+||+|+|.+ +++++|..|+.++..+|.++++++|||||+.++++
T Consensus 1 M~~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~ 80 (605)
T 4b9q_A 1 MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDE 80 (605)
T ss_dssp -CCEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTSH
T ss_pred CCcEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCCH
Confidence 35799999999999999999999999999999999999999975 47999999999999999999999999999999999
Q ss_pred HHHhhhhcCCceeeeCCCCCeEEEEEecCCceeeCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecccCCHHHHHHHHH
Q psy740 82 HVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQITAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLD 161 (763)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~peev~a~~L~~lk~~ae~~~~~~v~~~VITVPa~f~~~qR~al~~ 161 (763)
.++.+.+++||.++..++|.+.+.+. +..++|+++++++|++|++.|+.+++..+.++|||||+||++.||+++++
T Consensus 81 ~v~~~~~~~p~~~~~~~~g~~~~~~~----~~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~ 156 (605)
T 4b9q_A 81 EVQRDVSIMPFKIIAADNGDAWVEVK----GQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKD 156 (605)
T ss_dssp HHHHHHTTCSSEEEECTTSBEEEEET----TEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHH
T ss_pred HHHHHhhcCCeEEEEcCCCceEEEEC----CEEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHH
Confidence 99999999999999989998887763 57899999999999999999999999999999999999999999999999
Q ss_pred HHh----------------------------------------------------------HhhhcCCCCCchhHHHHHH
Q psy740 162 AAK----------------------------------------------------------IIASAANPYLGGRNIDYKL 183 (763)
Q Consensus 162 Aa~----------------------------------------------------------vl~~~~d~~lGG~d~D~~l 183 (763)
|++ |++++|+.+|||.+||+.|
T Consensus 157 Aa~~AGl~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l 236 (605)
T 4b9q_A 157 AGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRL 236 (605)
T ss_dssp HHHHTTCEEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHH
T ss_pred HHHHcCCceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHHHH
Confidence 999 5778889999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHhccCCCceeeEEeeccccC----cccEEEeeHHHHHHHhHHHHHH
Q psy740 184 AKHFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMND----IDVKGEMCRSEMEELCKDVFEN 259 (763)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~~~~~ie~l~~~----~d~~~~itr~~fe~l~~~l~~~ 259 (763)
++||.++|..+++.++..+++++.+|+.+||++|+.||.+. ...+.++++..+ .++.++|||++|+++|.|++++
T Consensus 237 ~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~-~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~~~ 315 (605)
T 4b9q_A 237 INYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQ-QTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNR 315 (605)
T ss_dssp HHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCS-EEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCC-CeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999976 467888776654 6788999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcCCCCCCCCChhHHHHhHHHHHcchhcCCccccccEEEE
Q psy740 260 VEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQKTPSTTLNQDEAVARGCALQCAMLSPAVRVRDFSVTD 339 (763)
Q Consensus 260 i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg~~~~~~~n~deaVa~GAa~~aa~ls~~~~~~~~~~~d 339 (763)
+..+|+++|+.+++...+|+.|+||||+||+|+|+++|+++||.++..++||++|||+|||++|+.+++. ++++.+.|
T Consensus 316 i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAai~a~~l~~~--~~~~~l~d 393 (605)
T 4b9q_A 316 SIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGD--VKDVLLLD 393 (605)
T ss_dssp TTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHHTSCCCSSSCTTTHHHHHHHHHHHHHHTS--SCSEEEEC
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHhccCcCCCcChhHHHHHhHHHHHHHhcCC--CCceEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999987 57899999
Q ss_pred ecccceEEEecCCCCCCCCCCceE-EEecCCCCcCceEEEEeeeCC----CEEEEEEEecC-cCCCCcccceEEeeccCC
Q psy740 340 LQVYPVVMEWDPSPNEPKDSKNFI-TVFPEMHAAPFSKKMTFYQNK----PFAIQLYYEGN-VPYPSKFIGKYQINDVKP 413 (763)
Q Consensus 340 ~~~~~i~i~~~~~~~~~~~~~~~~-~l~~~~~~iP~~k~~~f~~~~----~~~i~i~~~~~-~~~~~~~ig~~~i~~i~~ 413 (763)
++|++||+++.+ +.+ +||++|++||++++.+|++.. .+.|.+|+|+. ++.+|..||+|.|.|+||
T Consensus 394 v~p~slgie~~~---------g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~ 464 (605)
T 4b9q_A 394 VTPLSLGIETMG---------GVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINP 464 (605)
T ss_dssp BCSSCEEEEETT---------TEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCC
T ss_pred eeeeEEEEEEcC---------CEEEEEEeCCCcCCcceEEEeeeecccCceEEEEEEeccccccccCCEeeEEEEeCCCC
Confidence 999999999875 444 899999999999999997653 38899999987 788999999999999999
Q ss_pred CCCCCcceEEEEEEEcCCccEEEEEeeeeEeeccCCCCCCCcccccccccccccccCCccccccccccccCCcchhHhHH
Q psy740 414 GPDNASQKVTVKVRVNMDGVIGVIAASMVEKVENSGDTESMDVENTEEENGQKQEAGSENTENKAEKTQEGQSEDAEKKA 493 (763)
Q Consensus 414 ~~~g~~~~i~v~~~vd~~Gil~v~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 493 (763)
.++|.+ +|+|+|.+|.||+|+|++.+ ..
T Consensus 465 ~~~g~~-~i~v~f~id~~gil~v~a~~---~~------------------------------------------------ 492 (605)
T 4b9q_A 465 APRGMP-QIEVTFDIDADGILHVSAKD---KN------------------------------------------------ 492 (605)
T ss_dssp CSTTCC-CEEEEEEECTTSCEEEEEEE---TT------------------------------------------------
T ss_pred CcCCCc-eEEEEEEEcCCcEEEEEEEe---cC------------------------------------------------
Confidence 999987 59999999999999999852 10
Q ss_pred HhhhccccceeeeeeEeecCCCCCHHHHHHHHHHHHhhhhchHHHHHHHHHhhhhHHHHHHHHHHccchHHhhccCCHHH
Q psy740 494 AEAKKKVVSKTLDLTISATTHGLSPEQLNAHTELEGKMIADDKLEKERIDARNCLEEYVYDLRNKLGSEEEFALYIAADD 573 (763)
Q Consensus 494 ~~~~~K~~~k~~~~~i~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~ea~N~LEs~iy~~R~~L~~~~~~~~~~teee 573 (763)
..+...++|... .+||.++++++++++.++..+|+..+++.++||+||+|+|++|..|+ .|..++++++
T Consensus 493 -------tg~~~~i~i~~~-~~ls~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~~~---~~~~~~~~~~ 561 (605)
T 4b9q_A 493 -------SGKEQKITIKAS-SGLNEDEIQKMVRDAEANAEADRKCEELVQTRNQGDHLLHSTRKQVE---EAGDKLPADD 561 (605)
T ss_dssp -------TCCEECCEEESC-CSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHGGGSCHHH
T ss_pred -------CCcEEEEEecCC-CCCCHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHH---hhhhhCCHHH
Confidence 123345666543 58999999999999999999999999999999999999999999996 4888999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q psy740 574 ASKLSTQLDETENWLYEEGADVNKSVYISKLDELKAIGEKIRQRKV 619 (763)
Q Consensus 574 r~~l~~~l~e~~~WL~~~g~~a~~~~~~~kl~eL~~~~~pi~~R~~ 619 (763)
|+.|...|+++++||+.+ +.++|++++++|++.+.||..++.
T Consensus 562 ~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~l~~~~~~~~~~~~ 603 (605)
T 4b9q_A 562 KTAIESALTALETALKGE----DKAAIEAKMQELAQVSQKLMEIAQ 603 (605)
T ss_dssp HHHHHHHHHHHHHHHHSS----CHHHHHHHHHHHHHHTHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999964 589999999999999999988764
No 3
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=1.5e-85 Score=763.39 Aligned_cols=533 Identities=27% Similarity=0.449 Sum_probs=486.8
Q ss_pred cceEEEEcCccceEEEEEECCceeEEcCCCCCccccEEEEee-CCceEEcHHHHHhHhhccCchHHHhhhhhCCCCCChH
Q psy740 4 MSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFS-DRNRILGVAAKNQTVTNMKNTIHGFKRLIGREFKDPH 82 (763)
Q Consensus 4 ~~viGID~GTt~s~va~~~~g~~~iv~n~~~~r~~PS~V~~~-~~~~~~G~~A~~~~~~~p~~~~~~~KrllG~~~~d~~ 82 (763)
+.+||||||||||+||++.+|.++++.|..|.|++||+|+|. +++++||..|+.+...+|.++++++||+||+.++++.
T Consensus 2 ~~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d~~ 81 (605)
T 2kho_A 2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (605)
T ss_dssp --CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBSSSTT
T ss_pred CCEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCCCcHH
Confidence 479999999999999999999999999999999999999995 4679999999999999999999999999999999999
Q ss_pred HHhhhhcCCceeeeCCCCCeEEEEEecCCceeeCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecccCCHHHHHHHHHH
Q psy740 83 VQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQITAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDA 162 (763)
Q Consensus 83 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~peev~a~~L~~lk~~ae~~~~~~v~~~VITVPa~f~~~qR~al~~A 162 (763)
++...+++||.++...+|.+.+.+ . +..++|++|++++|++|++.|+.+++..+.++|||||+||++.||+++++|
T Consensus 82 v~~~~~~~p~~~~~~~~g~~~i~~--~--g~~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~~~A 157 (605)
T 2kho_A 82 VQRDVSIMPFKIIAADNGDAWVEV--K--GQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDA 157 (605)
T ss_dssp HHHHHHHCSSCEEECTTSBEEEEE--T--TEEECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEECCCCceEEEE--C--CEEEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHHHHH
Confidence 999999999999888889888877 2 468999999999999999999999999999999999999999999999999
Q ss_pred Hh----------------------------------------------------------HhhhcCCCCCchhHHHHHHH
Q psy740 163 AK----------------------------------------------------------IIASAANPYLGGRNIDYKLA 184 (763)
Q Consensus 163 a~----------------------------------------------------------vl~~~~d~~lGG~d~D~~l~ 184 (763)
++ |++++|+.+|||++||+.|+
T Consensus 158 ~~~AGl~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~~l~ 237 (605)
T 2kho_A 158 GRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLI 237 (605)
T ss_dssp HHTTTCEEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHHHHH
T ss_pred HHHcCCceEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHHHHH
Confidence 99 34456788999999999999
Q ss_pred HHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHhccCCCceeeEEeeccccC----cccEEEeeHHHHHHHhHHHHHHH
Q psy740 185 KHFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMND----IDVKGEMCRSEMEELCKDVFENV 260 (763)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~~~~~ie~l~~~----~d~~~~itr~~fe~l~~~l~~~i 260 (763)
+||.++|++++++++..+++++.+|+.+||++|+.||.+. ...+.+++++++ .++.++|||++|+++|+|+++++
T Consensus 238 ~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~-~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i 316 (605)
T 2kho_A 238 NYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQ-QTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRS 316 (605)
T ss_dssp HHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSS-EEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCCSTTGGG
T ss_pred HHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCC-ceEEEecccccCCCCceEEEEEEeHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999876 477888877653 56788999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcCCCCCCCCChhHHHHhHHHHHcchhcCCccccccEEEEe
Q psy740 261 EKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQKTPSTTLNQDEAVARGCALQCAMLSPAVRVRDFSVTDL 340 (763)
Q Consensus 261 ~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg~~~~~~~n~deaVa~GAa~~aa~ls~~~~~~~~~~~d~ 340 (763)
..+|+++|+.+++...+|+.|+||||+||+|+|++.|+++||.++..++||++|||+|||++|+.+++. ++++.+.|+
T Consensus 317 ~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~fg~~~~~~~npd~aVA~GAa~~a~~l~~~--~~~~~l~dv 394 (605)
T 2kho_A 317 IEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGD--VKDVLLLDV 394 (605)
T ss_dssp TSHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHHTTTTTS--CCCCCCSBC
T ss_pred HHHHHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhcCCCcCcCCCcchHHHHHHHHHHHHhcCC--ccCceEEee
Confidence 999999999999999999999999999999999999999999999999999999999999999999987 678999999
Q ss_pred cccceEEEecCCCCCCCCCCceE-EEecCCCCcCceEEEEeeeCC----CEEEEEEEecC-cCCCCcccceEEeeccCCC
Q psy740 341 QVYPVVMEWDPSPNEPKDSKNFI-TVFPEMHAAPFSKKMTFYQNK----PFAIQLYYEGN-VPYPSKFIGKYQINDVKPG 414 (763)
Q Consensus 341 ~~~~i~i~~~~~~~~~~~~~~~~-~l~~~~~~iP~~k~~~f~~~~----~~~i~i~~~~~-~~~~~~~ig~~~i~~i~~~ 414 (763)
+|++||+++.+ +.+ +||++|+++|++++.+|++.. .+.|.+|+|+. ++.+|..||+|.|.|+||.
T Consensus 395 ~p~slgi~~~~---------g~~~~li~r~t~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~ 465 (605)
T 2kho_A 395 TPLSLGIETMG---------GVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPA 465 (605)
T ss_dssp CCCCEEEEETT---------TEEEEEECTTBCSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCSC
T ss_pred eeeeccccccC---------CceEEEEecccccCccceEEEEecCCCceEEEEEEEeccCcccccCcEEeEEEecCCCCC
Confidence 99999999976 444 799999999999999997643 38899999977 7788999999999999999
Q ss_pred CCCCcceEEEEEEEcCCccEEEEEeeeeEeeccCCCCCCCcccccccccccccccCCccccccccccccCCcchhHhHHH
Q psy740 415 PDNASQKVTVKVRVNMDGVIGVIAASMVEKVENSGDTESMDVENTEEENGQKQEAGSENTENKAEKTQEGQSEDAEKKAA 494 (763)
Q Consensus 415 ~~g~~~~i~v~~~vd~~Gil~v~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 494 (763)
++|.+ +|+|+|.+|.||+|+|++.+ ..
T Consensus 466 ~~g~~-~i~v~f~id~~gil~v~a~~---~~------------------------------------------------- 492 (605)
T 2kho_A 466 PRGMP-QIEVTFDIDADGILHVSAKD---KN------------------------------------------------- 492 (605)
T ss_dssp CTTCS-CEEEEEEECTTSCEEEEEEE---TT-------------------------------------------------
T ss_pred CCCCc-EEEEEEEEcCCCceeEEEEE---cC-------------------------------------------------
Confidence 99987 59999999999999999842 10
Q ss_pred hhhccccceeeeeeEeecCCCCCHHHHHHHHHHHHhhhhchHHHHHHHHHhhhhHHHHHHHHHHccchHHhhccCCHHHH
Q psy740 495 EAKKKVVSKTLDLTISATTHGLSPEQLNAHTELEGKMIADDKLEKERIDARNCLEEYVYDLRNKLGSEEEFALYIAADDA 574 (763)
Q Consensus 495 ~~~~K~~~k~~~~~i~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~ea~N~LEs~iy~~R~~L~~~~~~~~~~teeer 574 (763)
..+...++|+.. .+||.++++++++++.++..+|+..+++.+++|+||+|||++|.+|. + |..++++++|
T Consensus 493 ------tg~~~~i~i~~~-~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l~--~-~~~~~~~~~~ 562 (605)
T 2kho_A 493 ------SGKEQKITIKAS-SGLNEDEIQKMVRDAEANAEADRKFDELVQTRNQGDHLLHSTRKQVE--E-AGDKLPADDK 562 (605)
T ss_dssp ------TCCEEEEEECTT-SSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--H-HGGGSCHHHH
T ss_pred ------CCceeecccccc-cCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH--h-hhccCCHHHH
Confidence 123445666654 68999999999999999999999999999999999999999999996 3 8899999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q psy740 575 SKLSTQLDETENWLYEEGADVNKSVYISKLDELKAIGEKIRQRKV 619 (763)
Q Consensus 575 ~~l~~~l~e~~~WL~~~g~~a~~~~~~~kl~eL~~~~~pi~~R~~ 619 (763)
+.|...|+++++|||.+ ++++|++++++|+++++||..|+.
T Consensus 563 ~~i~~~~~~~~~~l~~~----~~~~~~~~~~~l~~~~~~~~~~~~ 603 (605)
T 2kho_A 563 TAIESALTALETALKGE----DKAAIEAKMQELAQVSQKLMEIAQ 603 (605)
T ss_dssp HHHHHHHHHHHHHTTSS----CHHHHHHHHHHHHTTCHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999843 899999999999999999998864
No 4
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=6.3e-81 Score=717.91 Aligned_cols=490 Identities=31% Similarity=0.542 Sum_probs=452.3
Q ss_pred CCCcceEEEEcCccceEEEEEECCceeEEcCCCCCccccEEEEeeCCceEEcHHHHHhHhhccCchHHHhhhhhCCCCCC
Q psy740 1 MAGMSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTVTNMKNTIHGFKRLIGREFKD 80 (763)
Q Consensus 1 m~~~~viGID~GTt~s~va~~~~g~~~iv~n~~~~r~~PS~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~KrllG~~~~d 80 (763)
|+|+.+||||||||||+||++.+|.++++.|+.|+|+|||+|+|.+++++||..|+.++..+|.++++++|||||+.++|
T Consensus 1 M~m~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d 80 (554)
T 1yuw_A 1 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDD 80 (554)
T ss_dssp CCSCCCEEEEECSSEEEEEEECSSSEEECCCTTSCSEEECCEEECSSCEEETHHHHTTTTTCGGGEECCGGGTTTCCSSC
T ss_pred CCCCCEEEEEeCcccEEEEEEECCEEEEEECCCCCeecceEEEEcCCcEEEcHHHHHhhhhChhhehHhhHHhcCCCCCc
Confidence 99999999999999999999999999999999999999999999998999999999999999999999999999999999
Q ss_pred hHHHhhhhcCCceeeeCCCCCeEEEEEecCCceeeCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecccCCHHHHHHHH
Q psy740 81 PHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQITAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALL 160 (763)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~peev~a~~L~~lk~~ae~~~~~~v~~~VITVPa~f~~~qR~al~ 160 (763)
+.++...+++||.++. .+|.+.+.+.+.+....++|+++++++|++|++.|+.+++.++.++|||||+||++.||++++
T Consensus 81 ~~v~~~~~~~p~~v~~-~~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~a~~ 159 (554)
T 1yuw_A 81 AVVQSDMKHWPFMVVN-DAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATK 159 (554)
T ss_dssp SHHHHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHH
T ss_pred HHHHHHhhcCCeEEEe-cCCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHH
Confidence 9999999999999884 478888999888877899999999999999999999999999999999999999999999999
Q ss_pred HHHh-------------------------------------------------------HhhhcCCCCCchhHHHHHHHH
Q psy740 161 DAAK-------------------------------------------------------IIASAANPYLGGRNIDYKLAK 185 (763)
Q Consensus 161 ~Aa~-------------------------------------------------------vl~~~~d~~lGG~d~D~~l~~ 185 (763)
+|++ |+++.|+.+|||++||+.|++
T Consensus 160 ~A~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~ 239 (554)
T 1yuw_A 160 DAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMVN 239 (554)
T ss_dssp HHHHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHH
T ss_pred HHHHHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHHHHHH
Confidence 9999 566788899999999999999
Q ss_pred HHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHhccCCCceeeEEeeccccCcccEEEeeHHHHHHHhHHHHHHHHHHHH
Q psy740 186 HFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMCRSEMEELCKDVFENVEKTLK 265 (763)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~~~~~ie~l~~~~d~~~~itr~~fe~l~~~l~~~i~~~i~ 265 (763)
|+.++|..+++.++..+++++.+|+.+||++|+.||.+. ...+.+++++++.++...|||++|+++|.++++++..+|+
T Consensus 240 ~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~-~~~i~i~~~~~g~~~~~~ltr~~~e~l~~~~~~~i~~~i~ 318 (554)
T 1yuw_A 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSST-QASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVE 318 (554)
T ss_dssp HHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSS-EEEEEETTCSSSCCEEEEEEHHHHHHHTHHHHHHTTHHHH
T ss_pred HHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCc-eEEEEEeeccCCceEEEEEEHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999876 5788999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcC-CCCCCCCChhHHHHhHHHHHcchhcC--CccccccEEEEecc
Q psy740 266 DCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KTPSTTLNQDEAVARGCALQCAMLSP--AVRVRDFSVTDLQV 342 (763)
Q Consensus 266 ~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg-~~~~~~~n~deaVa~GAa~~aa~ls~--~~~~~~~~~~d~~~ 342 (763)
++|+.+++...+|+.|+||||+||+|+|++.|++.|+ .++..+.||++|||+|||++|+.+++ .++++++.+.|++|
T Consensus 319 ~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~~~~~~~~dv~p 398 (554)
T 1yuw_A 319 KALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTP 398 (554)
T ss_dssp HHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCCCCTTSSCCCCBCS
T ss_pred HHHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCCccccccceEEEEeee
Confidence 9999999999999999999999999999999999995 78889999999999999999999998 46788999999999
Q ss_pred cceEEEecCCCCCCCCCCceEEEecCCCCcCceEEEEeeeC----CCEEEEEEEecC-cCCCCcccceEEeeccCCCCCC
Q psy740 343 YPVVMEWDPSPNEPKDSKNFITVFPEMHAAPFSKKMTFYQN----KPFAIQLYYEGN-VPYPSKFIGKYQINDVKPGPDN 417 (763)
Q Consensus 343 ~~i~i~~~~~~~~~~~~~~~~~l~~~~~~iP~~k~~~f~~~----~~~~i~i~~~~~-~~~~~~~ig~~~i~~i~~~~~g 417 (763)
++||+++.+ + .+.+||++|+++|++++.+|++. ..+.|.+|+|+. ++.+|..||+|.|.|+|+.++|
T Consensus 399 ~slgi~~~~----g----~~~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g 470 (554)
T 1yuw_A 399 LSLGIETAG----G----VMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRG 470 (554)
T ss_dssp SCEEEEETT----T----EEEEEECTTCBSSEEEEEEEEESSTTCSEEEEEEEESSSSBGGGSEEEEEEEEECCCCCSTT
T ss_pred eEEEEEecC----c----eEEEEEECCCccCceeEEEeeeccCCCceEEEEEEecCccccccCcEEEEEEEeCCCCCccc
Confidence 999999975 1 34489999999999999999764 238899999977 7778999999999999999999
Q ss_pred CcceEEEEEEEcCCccEEEEEeeeeEeeccCCCCCCCcccccccccccccccCCccccccccccccCCcchhHhHHHhhh
Q psy740 418 ASQKVTVKVRVNMDGVIGVIAASMVEKVENSGDTESMDVENTEEENGQKQEAGSENTENKAEKTQEGQSEDAEKKAAEAK 497 (763)
Q Consensus 418 ~~~~i~v~~~vd~~Gil~v~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (763)
.+ +|+|+|.+|.||+|+|++.+ ..
T Consensus 471 ~~-~i~v~f~id~~gil~v~a~~---~~---------------------------------------------------- 494 (554)
T 1yuw_A 471 VP-QIEVTFDIDANGILNVSAVD---KS---------------------------------------------------- 494 (554)
T ss_dssp CC-CEEEEEEECTTCCEEEEEEE---TT----------------------------------------------------
T ss_pred cc-EEEEEEEEccCceEEEEEEe---cc----------------------------------------------------
Confidence 87 59999999999999999852 10
Q ss_pred ccccceeeeeeEeecCCCCCHHHHHHHHHHHHhhhhchHHHHHHHHHhhhhHHHHHHHHHHc
Q psy740 498 KKVVSKTLDLTISATTHGLSPEQLNAHTELEGKMIADDKLEKERIDARNCLEEYVYDLRNKL 559 (763)
Q Consensus 498 ~K~~~k~~~~~i~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~ea~N~LEs~iy~~R~~L 559 (763)
..+...++|+....+||.++++++++++.+|..+|+..+++.+++|+||+|||++|++|
T Consensus 495 ---tg~~~~~~i~~~~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l 553 (554)
T 1yuw_A 495 ---TGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATV 553 (554)
T ss_dssp ---TCCEEEEEECCCSSCSCHHHHHHHHHHHHHTTTHHHHHTTSSCSCEECSSCCSCSCCCC
T ss_pred ---CCCceeEEEecCCCCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 02334566666556899999999999999999999999999999999999999999876
No 5
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=1.6e-69 Score=618.25 Aligned_cols=446 Identities=28% Similarity=0.468 Sum_probs=396.4
Q ss_pred cceEEEEcCccceEEEEEECCceeEEcCCCCCccccEEEEeeCCceEEcHHHHHhHhhccCchHHHhhhhhCCCCCChHH
Q psy740 4 MSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTVTNMKNTIHGFKRLIGREFKDPHV 83 (763)
Q Consensus 4 ~~viGID~GTt~s~va~~~~g~~~iv~n~~~~r~~PS~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~KrllG~~~~d~~~ 83 (763)
+.+||||||||||+||++.+|.++++.|..|.+++||+|+|.+++++||..|+.+...+| ++++++||+||+++.
T Consensus 2 ~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg~p~~---- 76 (509)
T 2v7y_A 2 SKIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFKNGERLVGEVAKRQAITNP-NTIISIKRHMGTDYK---- 76 (509)
T ss_dssp CCEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEESSSSEEESHHHHTTTTTCS-SEEECGGGTTTSCCC----
T ss_pred CCEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEECCCcEEECHHHHHhHHhCC-CcHHHHHHhcCCCcE----
Confidence 479999999999999999999999999999999999999998778999999999999999 999999999998432
Q ss_pred HhhhhcCCceeeeCCCCCeEEEEEecCCceeeCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecccCCHHHHHHHHHHH
Q psy740 84 QDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQITAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAA 163 (763)
Q Consensus 84 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~peev~a~~L~~lk~~ae~~~~~~v~~~VITVPa~f~~~qR~al~~Aa 163 (763)
+ .+ . +..++|+++++++|++|+..|+.+++..+..+|||||+||++.||+++++|+
T Consensus 77 ----------~----------~~--~--g~~~~~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a~ 132 (509)
T 2v7y_A 77 ----------V----------EI--E--GKQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAG 132 (509)
T ss_dssp ----------E----------EE--T--TEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred ----------E----------EE--C--CEEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 1 11 1 2478999999999999999999999999999999999999999999999999
Q ss_pred h-----------------------------------------------------HhhhcCCCCCchhHHHHHHHHHHHHH
Q psy740 164 K-----------------------------------------------------IIASAANPYLGGRNIDYKLAKHFSQE 190 (763)
Q Consensus 164 ~-----------------------------------------------------vl~~~~d~~lGG~d~D~~l~~~~~~~ 190 (763)
+ ++++.|+.+|||++||+.|++||.++
T Consensus 133 ~~AGl~~~~li~Ep~AAAlay~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~ 212 (509)
T 2v7y_A 133 RIAGLEVERIINEPTAAALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQ 212 (509)
T ss_dssp HHTTCEEEEEEEHHHHHHHHTTGGGSCSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHH
T ss_pred HHcCCCeEEEecCHHHHHHHHhhccCCCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHHHH
Confidence 8 55567888999999999999999999
Q ss_pred HHhhcCCCCCCCHHHHHHHHHHHHHHHHhccCCCceeeEEeeccccC----cccEEEeeHHHHHHHhHHHHHHHHHHHHH
Q psy740 191 FKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMND----IDVKGEMCRSEMEELCKDVFENVEKTLKD 266 (763)
Q Consensus 191 ~~~~~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~~~~~ie~l~~~----~d~~~~itr~~fe~l~~~l~~~i~~~i~~ 266 (763)
|..+++.++..+++++.+|+.+||++|+.||.+. ...+.+++++++ .++.++|||++|+++|+|+++++..+|++
T Consensus 213 ~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~-~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~~ 291 (509)
T 2v7y_A 213 FKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVT-QTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGPVRQ 291 (509)
T ss_dssp HHHHHSCCGGGCHHHHHHHHHHHHHHHHHTTTCS-EEEEEEEEEEEETTEEEEEEEEEEHHHHHHHTHHHHHTTHHHHHH
T ss_pred HHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCC-cEEEEEeccccCCCCCeeEEEEEEHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988899999999999999999999876 467888877652 46778999999999999999999999999
Q ss_pred HHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcCCCCCCCCChhHHHHhHHHHHcchhcCCccccccEEEEecccceE
Q psy740 267 CLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQKTPSTTLNQDEAVARGCALQCAMLSPAVRVRDFSVTDLQVYPVV 346 (763)
Q Consensus 267 ~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg~~~~~~~n~deaVa~GAa~~aa~ls~~~~~~~~~~~d~~~~~i~ 346 (763)
+|+.+++...+|+.|+||||+||+|+|++.|++.||.++....||++|||+|||++|+.+++. ++++.+.|++|++||
T Consensus 292 ~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~aVa~Gaa~~a~~l~~~--~~~~~~~dv~p~slg 369 (509)
T 2v7y_A 292 ALQDAGLTPADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAAIQGGVIAGE--VKDVVLLDVTPLSLG 369 (509)
T ss_dssp HHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHHSSCCBCCSCTTTHHHHHHHHHHHHHHTC--CCCCCCCCBCSSEEE
T ss_pred HHHHcCCChhHCcEEEEECCcccChHHHHHHHHHhCCCcCcCCCchhhhHhhHHHHHHHhcCC--ccCceEEEeeccccc
Confidence 999999999999999999999999999999999999889999999999999999999999886 678999999999999
Q ss_pred EEecCCCCCCCCCCceEEEecCCCCcCceEEEEeeeCC----CEEEEEEEecC-cCCCCcccceEEeeccCCCCCCCcce
Q psy740 347 MEWDPSPNEPKDSKNFITVFPEMHAAPFSKKMTFYQNK----PFAIQLYYEGN-VPYPSKFIGKYQINDVKPGPDNASQK 421 (763)
Q Consensus 347 i~~~~~~~~~~~~~~~~~l~~~~~~iP~~k~~~f~~~~----~~~i~i~~~~~-~~~~~~~ig~~~i~~i~~~~~g~~~~ 421 (763)
+++.+. .+.+||++|+++|++++.+|++.. .+.|.+|+|+. ++.+|..||+|.|.++++.++|.+ +
T Consensus 370 i~~~~~--------~~~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~v~~ge~~~~~~~~~lg~~~l~~i~~~~~g~~-~ 440 (509)
T 2v7y_A 370 IETMGG--------VFTKLIERNTTIPTSKSQVFTTAADNQTTVDIHVLQGERPMAADNKSLGRFQLTGIPPAPRGVP-Q 440 (509)
T ss_dssp EEETTT--------EEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEEESSSBGGGSEEEEEEEEECCCCCCTTCS-C
T ss_pred eeecCC--------ceEEEEeCCCcCCcceEEEEEeeccCcEEEEEEEEecCccccccCcEEEEEEEeCCCCCCCccc-E
Confidence 998751 344899999999999999997643 38899999987 777889999999999999999987 5
Q ss_pred EEEEEEEcCCccEEEEEeeeeEeeccCCCCCCCcccccccccccccccCCccccccccccccCCcchhHhHHHhhhcccc
Q psy740 422 VTVKVRVNMDGVIGVIAASMVEKVENSGDTESMDVENTEEENGQKQEAGSENTENKAEKTQEGQSEDAEKKAAEAKKKVV 501 (763)
Q Consensus 422 i~v~~~vd~~Gil~v~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~K~~ 501 (763)
|+|+|.+|.||+|+|++.+ .. .
T Consensus 441 i~v~f~id~~gil~v~a~~---~~-------------------------------------------------------~ 462 (509)
T 2v7y_A 441 IEVTFDIDANGIVHVRAKD---LG-------------------------------------------------------T 462 (509)
T ss_dssp EEEEEEECTTSCEEEEEEE---TT-------------------------------------------------------T
T ss_pred EEEEEEEcCCceEEEEEEE---cC-------------------------------------------------------C
Confidence 9999999999999999842 10 1
Q ss_pred ceeeeeeEeecCCCCCHHHHHHHHHHHHhhhhchHHHHHHHHHhhhhH
Q psy740 502 SKTLDLTISATTHGLSPEQLNAHTELEGKMIADDKLEKERIDARNCLE 549 (763)
Q Consensus 502 ~k~~~~~i~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~ea~N~LE 549 (763)
.+...++|+.. .+||.++++++++++.+|..+|+..+++.+++|+||
T Consensus 463 g~~~~~~i~~~-~~l~~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~e 509 (509)
T 2v7y_A 463 NKEQSITIKSS-SGLSEEEIQRMIKEAEENAEADRKRKEAAELRNEAD 509 (509)
T ss_dssp CCEEEEEECSS-CSCCSHHHHHHHHHHHHSCGGGGGGGGCCCC-----
T ss_pred CcEEEEEEEec-CCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHhhcC
Confidence 23445666654 689999999999999999999999999999999997
No 6
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=1.4e-53 Score=474.59 Aligned_cols=324 Identities=37% Similarity=0.619 Sum_probs=307.1
Q ss_pred CcceEEEEcCccceEEEEEECCceeEEcCCCCCccccEEEEeeCCceEEcHHHHHhHhhccCchHHHhhhhhCCCCCChH
Q psy740 3 GMSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTVTNMKNTIHGFKRLIGREFKDPH 82 (763)
Q Consensus 3 ~~~viGID~GTt~s~va~~~~g~~~iv~n~~~~r~~PS~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~KrllG~~~~d~~ 82 (763)
+|.+||||||||||+||++.+|.++++.|..|++++||+|+|.+++++||..|..+..++|.++++++||+||+.++++.
T Consensus 22 ~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~~~~~~ 101 (404)
T 3i33_A 22 SMPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDAT 101 (404)
T ss_dssp -CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEECSSCEEETHHHHHTTTTCSTTEECCGGGTTTCCTTSHH
T ss_pred cCCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEECCCCEEecHHHHHhhHhChhhhHHHHHHHhCCCCCcHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhcCCceeeeCCCCCeEEEEEecCCceeeCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecccCCHHHHHHHHHH
Q psy740 83 VQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQITAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDA 162 (763)
Q Consensus 83 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~peev~a~~L~~lk~~ae~~~~~~v~~~VITVPa~f~~~qR~al~~A 162 (763)
++...+.+||.++. .+|...+.+.+.+....++|+++++++|++|++.++.+++..+.++|||||++|++.||+++++|
T Consensus 102 ~~~~~~~~p~~~~~-~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~~a 180 (404)
T 3i33_A 102 VQSDMKHWPFRVVS-EGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDA 180 (404)
T ss_dssp HHHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHhhCCceEEc-cCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEECCCCCHHHHHHHHHH
Confidence 99999999999886 67888999988777789999999999999999999999999999999999999999999999999
Q ss_pred Hh---------------------------------------------------------HhhhcCCCCCchhHHHHHHHH
Q psy740 163 AK---------------------------------------------------------IIASAANPYLGGRNIDYKLAK 185 (763)
Q Consensus 163 a~---------------------------------------------------------vl~~~~d~~lGG~d~D~~l~~ 185 (763)
++ ++++.++..+||.+||+.|++
T Consensus 181 ~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~ 260 (404)
T 3i33_A 181 GTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 260 (404)
T ss_dssp HHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHH
T ss_pred HHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHHHHHH
Confidence 98 555677789999999999999
Q ss_pred HHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHhccCCCceeeEEeeccccCcccEEEeeHHHHHHHhHHHHHHHHHHHH
Q psy740 186 HFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMCRSEMEELCKDVFENVEKTLK 265 (763)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~~~~~ie~l~~~~d~~~~itr~~fe~l~~~l~~~i~~~i~ 265 (763)
++.++|..+++.++..+++.+.+|+.+||++|+.||.+. ...+.+++++++.++.+.|+|++|+++|.++++++..+|+
T Consensus 261 ~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~-~~~~~~~~~~~g~~~~~~i~r~~~~~~~~~~~~~i~~~i~ 339 (404)
T 3i33_A 261 HLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSST-QASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVE 339 (404)
T ss_dssp HHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSS-EEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHTHHHHH
T ss_pred HHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCc-ceEEEEeeccCCceeEEEEcHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999876 5788899999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhc-CCCCCCCCChhHHHHhHHHHHcchhcC
Q psy740 266 DCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIF-QKTPSTTLNQDEAVARGCALQCAMLSP 328 (763)
Q Consensus 266 ~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~f-g~~~~~~~n~deaVa~GAa~~aa~ls~ 328 (763)
++|+.+++...+|+.|+||||+||+|+|++.|++.| |.++....||++|||+|||++|+++++
T Consensus 340 ~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 340 KALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp HHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHHC-
T ss_pred HHHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999 778889999999999999999999875
No 7
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=2.4e-52 Score=463.22 Aligned_cols=321 Identities=39% Similarity=0.651 Sum_probs=306.0
Q ss_pred ceEEEEcCccceEEEEEECCceeEEcCCCCCccccEEEEeeCCceEEcHHHHHhHhhccCchHHHhhhhhCCCCCChHHH
Q psy740 5 SVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTVTNMKNTIHGFKRLIGREFKDPHVQ 84 (763)
Q Consensus 5 ~viGID~GTt~s~va~~~~g~~~iv~n~~~~r~~PS~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~KrllG~~~~d~~~~ 84 (763)
.+||||||||||+||++.+|.++++.|..|.+++||+|+|.++++++|..|..+...+|.++++++||+||+.++++.++
T Consensus 19 ~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~~ 98 (394)
T 3qfu_A 19 TVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDDERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDRSVQ 98 (394)
T ss_dssp SCEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEECSSCEEESHHHHHTGGGCGGGEECCGGGTTTCCTTCHHHH
T ss_pred CEEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEeCCcEEecHHHHHhhHhCcccCHHHHHHHhCCCCCcHHHH
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCceeeeCCCCCeEEEEEecCCceeeCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecccCCHHHHHHHHHHHh
Q psy740 85 DELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQITAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAK 164 (763)
Q Consensus 85 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~peev~a~~L~~lk~~ae~~~~~~v~~~VITVPa~f~~~qR~al~~Aa~ 164 (763)
.+.+++||.++ ..+|...+.+.+.+....++|+++++++|++|++.++.+++..+.++|||||++|++.||+++++|++
T Consensus 99 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~~ 177 (394)
T 3qfu_A 99 KDIKHLPFNVV-NKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAGT 177 (394)
T ss_dssp HHHTTCSSEEE-EETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred HHhhcCCeEEE-cCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcCCCcceEEEEECCCCCHHHHHHHHHHHH
Confidence 99999999988 67888899998877778999999999999999999999999999999999999999999999999998
Q ss_pred ------------------------------------------------------HhhhcCCCCCchhHHHHHHHHHHHHH
Q psy740 165 ------------------------------------------------------IIASAANPYLGGRNIDYKLAKHFSQE 190 (763)
Q Consensus 165 ------------------------------------------------------vl~~~~d~~lGG~d~D~~l~~~~~~~ 190 (763)
++++.++.++||.+||+.|++|+.++
T Consensus 178 ~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l~~~ 257 (394)
T 3qfu_A 178 IAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQLIKA 257 (394)
T ss_dssp HTTCEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHH
T ss_pred HcCCceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHHHHHHHHH
Confidence 55667888999999999999999999
Q ss_pred HHhhcCCCCCCCHHHHHHHHHHHHHHHHhccCCCceeeEEeeccccCcccEEEeeHHHHHHHhHHHHHHHHHHHHHHHHH
Q psy740 191 FKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMCRSEMEELCKDVFENVEKTLKDCLEK 270 (763)
Q Consensus 191 ~~~~~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~~~~~ie~l~~~~d~~~~itr~~fe~l~~~l~~~i~~~i~~~l~~ 270 (763)
|..+++.++..+++.+.+|+.+||++|+.||.+. ...+.+++++++.++.+.|+|++|+++|+++++++..+|.++|+.
T Consensus 258 ~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~-~~~~~~~~~~~~~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~l~~ 336 (394)
T 3qfu_A 258 FKKKHGIDVSDNNKALAKLKREAEKAKRALSSQM-STRIEIDSFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKVLQD 336 (394)
T ss_dssp HHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCS-EEEEEEEEEETTEEEEEEEEHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCC-cEEEEEEeccCCceeEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999976 477889999999999999999999999999999999999999999
Q ss_pred cCCCCCCccEEEEecCCCCcHHHHHHHHHhc-CCCCCCCCChhHHHHhHHHHHcchhc
Q psy740 271 SKLALSDIHSVEIVGGSSRIPAIKGLIEKIF-QKTPSTTLNQDEAVARGCALQCAMLS 327 (763)
Q Consensus 271 a~~~~~~i~~V~lvGGssriP~v~~~l~~~f-g~~~~~~~n~deaVa~GAa~~aa~ls 327 (763)
+++...+|+.|+|+||+||+|+|++.|++.| +.++....||++|||+|||++|++||
T Consensus 337 ~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 337 SGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp HTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred cCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999 78888999999999999999999875
No 8
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=1.1e-51 Score=459.87 Aligned_cols=322 Identities=28% Similarity=0.452 Sum_probs=294.8
Q ss_pred cceEEEEcCccceEEEEEECCceeEEcCCCCCccccEEEEeeCCceEEcHHHHHhHhhccCchHHHhhhhhCCCCCChHH
Q psy740 4 MSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTVTNMKNTIHGFKRLIGREFKDPHV 83 (763)
Q Consensus 4 ~~viGID~GTt~s~va~~~~g~~~iv~n~~~~r~~PS~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~KrllG~~~~d~~~ 83 (763)
+.+||||||||||+||++.+|.++++.|..|.+++||+|+|.++++++|..|..+..++|.++++++||+||+.++++.+
T Consensus 13 ~~vvGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~~~~~~ 92 (409)
T 4gni_A 13 RVVIGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYVDGDEYYGQQAKNFLVRNPKNTVAYFRDILGQDFKSVDP 92 (409)
T ss_dssp CCEEEEEECSSEEEEEEEETTEEEEECCTTSCSSEECEEEEETTEEEEHHHHHHHHHHCGGGEEESCGGGTTCCGGGCCC
T ss_pred CcEEEEEcCCCeEEEEEEeCCceEEEECCCCCccCceEEEECCCcEEEcHHHHHhhHhChHhhHHHHHHHhCCCccchhh
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999988765
Q ss_pred HhhhhcCCceeeeCCCCCeEEEEEec----CCceeeCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecccCCHHHHHHH
Q psy740 84 QDELKFLPYNVSENPDGSIGIKVKYL----NEDRVFTPEQITAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKAL 159 (763)
Q Consensus 84 ~~~~~~~~~~~~~~~~g~~~~~v~~~----~~~~~~~peev~a~~L~~lk~~ae~~~~~~v~~~VITVPa~f~~~qR~al 159 (763)
+... .++.+. ..+|.+.+.+... +....++|++|++++|++|++.++.+++..+.++|||||++|++.||+++
T Consensus 93 ~~~~--~~~~~~-~~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~ 169 (409)
T 4gni_A 93 THNH--ASAHPQ-EAGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKAAL 169 (409)
T ss_dssp GGGT--TSCCCE-EETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHH
T ss_pred hhhc--ccccee-cCCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHH
Confidence 5443 344333 4578888888764 35678999999999999999999999999999999999999999999999
Q ss_pred HHHHh--------------------------------------------------------HhhhcCCCCCchhHHHHHH
Q psy740 160 LDAAK--------------------------------------------------------IIASAANPYLGGRNIDYKL 183 (763)
Q Consensus 160 ~~Aa~--------------------------------------------------------vl~~~~d~~lGG~d~D~~l 183 (763)
++|++ ++++.++..+||.+||+.|
T Consensus 170 ~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~i 249 (409)
T 4gni_A 170 IAAAAAADLEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKVL 249 (409)
T ss_dssp HHHHHHTTCEEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHHHH
T ss_pred HHHHHHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHHHH
Confidence 99998 5666678899999999999
Q ss_pred HHHHHHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHhccCCCceeeEEeeccccCcccEEEeeHHHHHHHhHHHHHHHH
Q psy740 184 AKHFSQEFKQKYN--IEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMCRSEMEELCKDVFENVE 261 (763)
Q Consensus 184 ~~~~~~~~~~~~~--~~~~~~~~~~~rL~~~aek~K~~LS~~~~~~~~~ie~l~~~~d~~~~itr~~fe~l~~~l~~~i~ 261 (763)
++|+..+|..+++ .++..+++.+.+|+.+||++|+.||.+. ...+.++++.++.++.+.|||++|+++|+++++++.
T Consensus 250 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~-~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~ 328 (409)
T 4gni_A 250 IDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRST-NASFSVESLIDGLDFASTINRLRYETIARTVFEGFN 328 (409)
T ss_dssp HHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSS-EEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCC-ceEEEeecccCCcceEEEeeHHHHHHHHHHHHHHHH
Confidence 9999999999998 8888899999999999999999999876 578999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcCCC--C------CCCCChhHHHHhHHHHHcchhcCC
Q psy740 262 KTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQKT--P------STTLNQDEAVARGCALQCAMLSPA 329 (763)
Q Consensus 262 ~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg~~--~------~~~~n~deaVa~GAa~~aa~ls~~ 329 (763)
.+|+++|+.+++...+|+.|+||||+||+|+|++.|++.||.. + ...+||++|||+|||++|+.....
T Consensus 329 ~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~~~~ 404 (409)
T 4gni_A 329 RLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQASLIQEH 404 (409)
T ss_dssp HHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhhhhhhh
Confidence 9999999999999999999999999999999999999999865 3 678999999999999999987654
No 9
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=1.5e-50 Score=446.93 Aligned_cols=319 Identities=31% Similarity=0.536 Sum_probs=292.3
Q ss_pred cceEEEEcCccceEEEEEECCceeEEcCCCCCccccEEEEeeC-CceEEcHHHHHhHhhccCchHHHhhhhhCCCCCChH
Q psy740 4 MSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSD-RNRILGVAAKNQTVTNMKNTIHGFKRLIGREFKDPH 82 (763)
Q Consensus 4 ~~viGID~GTt~s~va~~~~g~~~iv~n~~~~r~~PS~V~~~~-~~~~~G~~A~~~~~~~p~~~~~~~KrllG~~~~d~~ 82 (763)
+.+||||||||||+||++.+|.++++.|..|.+.+||+|+|.. ++++||..|+.+...+|.++++++||+||+.++++.
T Consensus 2 ~~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 81 (383)
T 1dkg_D 2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (383)
T ss_dssp -CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSCSHH
T ss_pred CcEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCCCcHH
Confidence 4789999999999999999999999999999999999999964 578999999999999999999999999999999999
Q ss_pred HHhhhhcCCceeeeCCCCCeEEEEEecCCceeeCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecccCCHHHHHHHHHH
Q psy740 83 VQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQITAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDA 162 (763)
Q Consensus 83 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~peev~a~~L~~lk~~ae~~~~~~v~~~VITVPa~f~~~qR~al~~A 162 (763)
++...+.+||.++...+|.+.+.+ . +..++|+++++++|+++++.|+.+++..+..+|||||++|++.||+++++|
T Consensus 82 ~~~~~~~~p~~~~~~~~~~~~~~~--~--g~~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a 157 (383)
T 1dkg_D 82 VQRDVSIMPFKIIAADNGDAWVEV--K--GQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDA 157 (383)
T ss_dssp HHHHTTTCSSEEEECSSSBEEEEE--T--TEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEEcCCCcEEEEE--C--CEEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 998889999999888888887776 2 358999999999999999999999998999999999999999999999999
Q ss_pred Hh----------------------------------------------------------HhhhcCCCCCchhHHHHHHH
Q psy740 163 AK----------------------------------------------------------IIASAANPYLGGRNIDYKLA 184 (763)
Q Consensus 163 a~----------------------------------------------------------vl~~~~d~~lGG~d~D~~l~ 184 (763)
++ ++++.++..+||++||+.|+
T Consensus 158 ~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~~l~ 237 (383)
T 1dkg_D 158 GRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLI 237 (383)
T ss_dssp HHHTTCEESCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHHHHH
T ss_pred HHHcCCceEEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHHHHH
Confidence 98 12235667899999999999
Q ss_pred HHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHhccCCCceeeEEeecccc---C-cccEEEeeHHHHHHHhHHHHHHH
Q psy740 185 KHFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMN---D-IDVKGEMCRSEMEELCKDVFENV 260 (763)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~~~~~ie~l~~---~-~d~~~~itr~~fe~l~~~l~~~i 260 (763)
+|+.++|..+++.++..+++.+.+|+.+||++|+.||... ...+.++.+.+ | .++.++|||++|+++|+|+++++
T Consensus 238 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~-~~~i~i~~~~~~~~G~~~~~~~it~~~~~~~~~~~~~~i 316 (383)
T 1dkg_D 238 NYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQ-QTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRS 316 (383)
T ss_dssp HHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSS-EEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHHHH
T ss_pred HHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCC-ceEEEEecccccCCCCeeEEEEEeHHHHHHHHHHHHHHH
Confidence 9999999999999988899999999999999999999865 46677776654 2 45678999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcCCCCCCCCChhHHHHhHHHHHcchhc
Q psy740 261 EKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQKTPSTTLNQDEAVARGCALQCAMLS 327 (763)
Q Consensus 261 ~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg~~~~~~~n~deaVa~GAa~~aa~ls 327 (763)
..+|+++|+.+++...+|+.|+|+||+||+|.|++.|++.||.++....||++|||+|||++|++||
T Consensus 317 ~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~ 383 (383)
T 1dkg_D 317 IELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLT 383 (383)
T ss_dssp HHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHhCCCCCCCcChHHHHHHHHHHHHHhhC
Confidence 9999999999999889999999999999999999999999998888999999999999999999875
No 10
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=100.00 E-value=1.6e-31 Score=267.74 Aligned_cols=210 Identities=19% Similarity=0.289 Sum_probs=185.8
Q ss_pred EEEEecccceEEEecCCCCCCCCCCceEEEecCCCCcCceEEEEeeeCCC----EEEEEEEecC-cCCCCcccceEEeec
Q psy740 336 SVTDLQVYPVVMEWDPSPNEPKDSKNFITVFPEMHAAPFSKKMTFYQNKP----FAIQLYYEGN-VPYPSKFIGKYQIND 410 (763)
Q Consensus 336 ~~~d~~~~~i~i~~~~~~~~~~~~~~~~~l~~~~~~iP~~k~~~f~~~~~----~~i~i~~~~~-~~~~~~~ig~~~i~~ 410 (763)
.+.|++|++|||++.+ + .+.+||++|++||++++.+|++..+ +.|.+|+|+. ++.+|..||+|.|.|
T Consensus 2 ~l~DV~p~slGie~~g----g----~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~Lg~f~l~g 73 (219)
T 4e81_A 2 LLLDVTPLSLGIETMG----G----VMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDG 73 (219)
T ss_dssp CCCCBCSSCEEEEETT----T----EEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEEC
T ss_pred eEEEecCcEEEEEEeC----C----EEEEEEeCcCcccEeEEEEEEeCCCCCceEEEEEEEcCCcccccCCEEEEEEEeC
Confidence 5789999999999986 1 3448999999999999999987543 8999999987 788999999999999
Q ss_pred cCCCCCCCcceEEEEEEEcCCccEEEEEeeeeEeeccCCCCCCCcccccccccccccccCCccccccccccccCCcchhH
Q psy740 411 VKPGPDNASQKVTVKVRVNMDGVIGVIAASMVEKVENSGDTESMDVENTEEENGQKQEAGSENTENKAEKTQEGQSEDAE 490 (763)
Q Consensus 411 i~~~~~g~~~~i~v~~~vd~~Gil~v~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 490 (763)
+||+|+|.+ .|.|+|.+|.||+|+|++.+ ..
T Consensus 74 ipp~p~G~~-~IeVtf~iD~nGiL~V~a~d---~~--------------------------------------------- 104 (219)
T 4e81_A 74 INPAPRGMP-QIEVTFDIDADGILHVSAKD---KN--------------------------------------------- 104 (219)
T ss_dssp CCCCSTTCS-CEEEEEEECTTCCEEEEEEE---TT---------------------------------------------
T ss_pred CCCCCCCCc-eEEEEEEeCCCCCEeeeeec---cc---------------------------------------------
Confidence 999999987 59999999999999999852 10
Q ss_pred hHHHhhhccccceeeeeeEeecCCCCCHHHHHHHHHHHHhhhhchHHHHHHHHHhhhhHHHHHHHHHHccchHHhhccCC
Q psy740 491 KKAAEAKKKVVSKTLDLTISATTHGLSPEQLNAHTELEGKMIADDKLEKERIDARNCLEEYVYDLRNKLGSEEEFALYIA 570 (763)
Q Consensus 491 ~~~~~~~~K~~~k~~~~~i~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~ea~N~LEs~iy~~R~~L~~~~~~~~~~t 570 (763)
.++...++|... .+||.+++++|++.+.++..+|+..+++.+++|.||+|||.+|..|. .+..+++
T Consensus 105 ----------tg~~~~i~I~~~-~~Ls~eeI~~m~~~a~~~~~eD~~~r~~~e~kn~le~~i~~~~~~l~---~~~~~l~ 170 (219)
T 4e81_A 105 ----------SGKEQKITIKAS-SGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVE---EAGDKLP 170 (219)
T ss_dssp ----------TCCEEEEEECTT-CSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHGGGSC
T ss_pred ----------cCccceEeeecc-ccccHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHHHH---HhhhhCC
Confidence 134556777653 57999999999999999999999999999999999999999999996 3888999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Q psy740 571 ADDASKLSTQLDETENWLYEEGADVNKSVYISKLDELKAIGEKIRQRKVD 620 (763)
Q Consensus 571 eeer~~l~~~l~e~~~WL~~~g~~a~~~~~~~kl~eL~~~~~pi~~R~~E 620 (763)
+++|+.|...|.++++||+++ ++++|.+++++|+.++.||..|+..
T Consensus 171 ~~~k~~i~~~l~~~~~~L~~~----~~~~i~~~~~~L~~~~~~i~~~~~~ 216 (219)
T 4e81_A 171 ADDKTAIESALTALETALKGE----DKAAIEAKMQELAQVSQKLMEIAQQ 216 (219)
T ss_dssp HHHHHHHHHHHHHHHHHHHSS----CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999975 7999999999999999999998765
No 11
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=99.97 E-value=2.3e-30 Score=262.03 Aligned_cols=207 Identities=12% Similarity=0.200 Sum_probs=182.4
Q ss_pred EEecccceEEEecCCCCCCCCCCce-EEEecCCCCcCceEEEEeeeCC----CEEEEEEEecC-cCCCCcccceEEeecc
Q psy740 338 TDLQVYPVVMEWDPSPNEPKDSKNF-ITVFPEMHAAPFSKKMTFYQNK----PFAIQLYYEGN-VPYPSKFIGKYQINDV 411 (763)
Q Consensus 338 ~d~~~~~i~i~~~~~~~~~~~~~~~-~~l~~~~~~iP~~k~~~f~~~~----~~~i~i~~~~~-~~~~~~~ig~~~i~~i 411 (763)
.|++||+|||++.+ +. .+||++|++||++++.+|++.. .+.|.+|||+. ++.+|..||+|.|.|+
T Consensus 1 ~Dv~p~slGie~~~---------g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~Lg~f~l~gi 71 (227)
T 1u00_A 1 MDVIPLSLGLETMG---------GLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGI 71 (227)
T ss_dssp CCBCSSCEEEEETT---------TEEEEEECTTCBSSEEEEEEEECSSTTCCCEEEEEEECSSSBGGGSEEEEEEEECCC
T ss_pred CCcccceEEEEEeC---------CEEEEEEeCcCccCceEEEEEEecCCCceEEEEEEEecCCccCCCCCEEEEEEEeCC
Confidence 38999999999975 44 4799999999999999998753 38999999987 7888999999999999
Q ss_pred CCCCCCCcceEEEEEEEcCCccEEEEEeeeeEeeccCCCCCCCcccccccccccccccCCccccccccccccCCcchhHh
Q psy740 412 KPGPDNASQKVTVKVRVNMDGVIGVIAASMVEKVENSGDTESMDVENTEEENGQKQEAGSENTENKAEKTQEGQSEDAEK 491 (763)
Q Consensus 412 ~~~~~g~~~~i~v~~~vd~~Gil~v~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 491 (763)
+|.|+|.+ +|+|+|.+|.||+|+|++.+ ..
T Consensus 72 ~~~p~G~~-~I~Vtf~iD~nGiL~V~a~d---~~---------------------------------------------- 101 (227)
T 1u00_A 72 PALPAGGA-HIRVTFQVDADGLLSVTAME---KS---------------------------------------------- 101 (227)
T ss_dssp CCCSTTCS-CEEEEEEECTTCCEEEEEEE---TT----------------------------------------------
T ss_pred CCCCCCce-EEEEEEEECCCCcEEEEeec---cc----------------------------------------------
Confidence 99999998 69999999999999998852 10
Q ss_pred HHHhhhccccceeeeeeEeecCCCCCHHHHHHHHHHHHhhhhchHHHHHHHHHhhhhHHHHHHHHHHccchHHhhccCCH
Q psy740 492 KAAEAKKKVVSKTLDLTISATTHGLSPEQLNAHTELEGKMIADDKLEKERIDARNCLEEYVYDLRNKLGSEEEFALYIAA 571 (763)
Q Consensus 492 ~~~~~~~K~~~k~~~~~i~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~ea~N~LEs~iy~~R~~L~~~~~~~~~~te 571 (763)
..+...++|... .+||.+++.++++.+.+|..+|+..+++.+++|.||+|||++|++|. + +..++++
T Consensus 102 ---------tg~~~~i~i~~~-~~Ls~eei~~~~~~~~~~~~~D~~~~e~~e~kn~le~~i~~~~~~l~--~-~~~~~~~ 168 (227)
T 1u00_A 102 ---------TGVEASIQVKPS-YGLTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALA--A-DAALLSA 168 (227)
T ss_dssp ---------TCCEEEEEECCC-SCCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--H-HGGGSCH
T ss_pred ---------ccccceEEEEec-cCCCHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHH--h-hhccCCH
Confidence 023345666654 57999999999999999999999999999999999999999999996 3 7889999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Q psy740 572 DDASKLSTQLDETENWLYEEGADVNKSVYISKLDELKAIGEKIRQRKVD 620 (763)
Q Consensus 572 eer~~l~~~l~e~~~WL~~~g~~a~~~~~~~kl~eL~~~~~pi~~R~~E 620 (763)
++|+.|...|+++++|||.+ ++++|++++++|++++.||..|+..
T Consensus 169 ~~k~~i~~~l~~~~~wl~~~----d~~~~~~~~~~L~~~~~~i~~r~~~ 213 (227)
T 1u00_A 169 AERQVIDDAAAHLSEVAQGD----DVDAIEQAIKNVDKQTQDFAARRMD 213 (227)
T ss_dssp HHHHHHHHHHHHHHHHTTSS----CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999943 5899999999999999999988753
No 12
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=99.97 E-value=7.2e-31 Score=285.18 Aligned_cols=263 Identities=19% Similarity=0.258 Sum_probs=198.8
Q ss_pred cceEEEEcCccceEEEEEECCceeEEcCCCCCccccEEEEeeCC--ce-EEcHHHHHhHhhccCchHHHhhhhhCCCCCC
Q psy740 4 MSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDR--NR-ILGVAAKNQTVTNMKNTIHGFKRLIGREFKD 80 (763)
Q Consensus 4 ~~viGID~GTt~s~va~~~~g~~~iv~n~~~~r~~PS~V~~~~~--~~-~~G~~A~~~~~~~p~~~~~~~KrllG~~~~d 80 (763)
+.+|||||||+||+|++..+| .++ .+||+|+|..+ .+ +||++|+.+..++|.++..
T Consensus 3 ~~~igIDlGT~~s~v~~~~~~--~~~-------~~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~------------ 61 (344)
T 1jce_A 3 RKDIGIDLGTANTLVFLRGKG--IVV-------NEPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKA------------ 61 (344)
T ss_dssp -CEEEEEECSSEEEEEETTTE--EEE-------EEESCEEEETTTCCEEEESHHHHTTTTCCCTTEEE------------
T ss_pred CceEEEEcCcCcEEEEECCCC--EEE-------eeCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEE------------
Confidence 578999999999999876443 222 27999999865 34 6999998776666665431
Q ss_pred hHHHhhhhcCCceeeeCCCCCeEEEEEecCCceeeCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecccCCHHHHHHHH
Q psy740 81 PHVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQITAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALL 160 (763)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~peev~a~~L~~lk~~ae~~~~~~v~~~VITVPa~f~~~qR~al~ 160 (763)
.+|+. +|. + .....++++++++|++++.. ..++ ...+|||||++|++.||++++
T Consensus 62 --------~~p~~-----~g~----i-----~~~~~~~~i~~~~l~~~~~~--~~~~--~~~~vitvP~~~~~~~r~~~~ 115 (344)
T 1jce_A 62 --------IRPMR-----DGV----I-----ADYTVALVMLRYFINKAKGG--MNLF--KPRVVIGVPIGITDVERRAIL 115 (344)
T ss_dssp --------ECCEE-----TTE----E-----SSHHHHHHHHHHHHHHHHTS--CCSC--CCEEEEEECTTCCHHHHHHHH
T ss_pred --------EecCC-----CCe----e-----CChHHHHHHHHHHHHHHhhc--cccC--CCeEEEEECCCCCHHHHHHHH
Confidence 11221 121 0 01123667777777766542 1233 478999999999999999999
Q ss_pred HHHh-------------------------------------------------HhhhcCCCCCchhHHHHHHHHHHHHHH
Q psy740 161 DAAK-------------------------------------------------IIASAANPYLGGRNIDYKLAKHFSQEF 191 (763)
Q Consensus 161 ~Aa~-------------------------------------------------vl~~~~d~~lGG~d~D~~l~~~~~~~~ 191 (763)
+|++ ++ ..++..+||++||+.|++++.++|
T Consensus 116 ~a~~~aG~~~~~li~ep~Aaa~~~~~~~~~~~~~lVvDiGggttdvsv~~~~~~~-~~~~~~lGG~~id~~l~~~l~~~~ 194 (344)
T 1jce_A 116 DAGLEAGASKVFLIEEPMAAAIGSNLNVEEPSGNMVVDIGGGTTEVAVISLGSIV-TWESIRIAGDEMDEAIVQYVRETY 194 (344)
T ss_dssp HHHHHTTCSEEEEEEHHHHHHHHTTCCTTSSSCEEEEEECSSCEEEEEEETTEEE-EEEEESCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCeEeccCCHHHHHHhcCCCCCCCceEEEEEeCCCeEEEEEEEcCCEE-eeCCCCccChhHHHHHHHHHHHHh
Confidence 9999 11 234668999999999999998776
Q ss_pred HhhcCCCCCCCHHHHHHHHHHHHHHHHhccCCCc-------eeeEEeeccccCcccEEEeeHHHHHHHhHHHHHHHHHHH
Q psy740 192 KQKYNIEPESNPRAFLRLLTEVEKLKKQMSANST-------KLPFGIECFMNDIDVKGEMCRSEMEELCKDVFENVEKTL 264 (763)
Q Consensus 192 ~~~~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~-------~~~~~ie~l~~~~d~~~~itr~~fe~l~~~l~~~i~~~i 264 (763)
. .++. ...||++|+.||.... ...+...++.++.++.++|+|++|+++++|+++++.++|
T Consensus 195 ~----~~~~---------~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~i~~~i 261 (344)
T 1jce_A 195 R----VAIG---------ERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKGGEVREALRSVVVAIVESV 261 (344)
T ss_dssp C----EECC---------HHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTEEEEEEEEHHHHHHHTHHHHHHHHHHH
T ss_pred C----cccC---------HHHHHHHHHHHhccCccccCCcceEEEeccccCCCCceeEEEeHHHHHHHHHHHHHHHHHHH
Confidence 4 2221 4689999999997542 123333345677778899999999999999999999999
Q ss_pred HHHHHHcCCC--CCCc-cEEEEecCCCCcHHHHHHHHHhcCCCCCCCCChhHHHHhHHHHHcchhc
Q psy740 265 KDCLEKSKLA--LSDI-HSVEIVGGSSRIPAIKGLIEKIFQKTPSTTLNQDEAVARGCALQCAMLS 327 (763)
Q Consensus 265 ~~~l~~a~~~--~~~i-~~V~lvGGssriP~v~~~l~~~fg~~~~~~~n~deaVa~GAa~~aa~ls 327 (763)
+++|+.++.. .+.+ +.|+|+||+|++|.|++.|++.|+.++....||++|||+|||++|+.++
T Consensus 262 ~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~ 327 (344)
T 1jce_A 262 RTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLDKVN 327 (344)
T ss_dssp HHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHHSSCEEECSSTTTHHHHHHHHGGGCHH
T ss_pred HHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHHCCCccccCChHHHHHHHHHHHHhChH
Confidence 9999987532 2224 6999999999999999999999998888888999999999999998765
No 13
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=99.93 E-value=2.1e-25 Score=215.88 Aligned_cols=159 Identities=19% Similarity=0.326 Sum_probs=135.5
Q ss_pred cccEEEEecccceEEEecCCCCCCCCCCceE-EEecCCCCcCceEEEEeeeCCC----EEEEEEEecC-cCCCCcccceE
Q psy740 333 RDFSVTDLQVYPVVMEWDPSPNEPKDSKNFI-TVFPEMHAAPFSKKMTFYQNKP----FAIQLYYEGN-VPYPSKFIGKY 406 (763)
Q Consensus 333 ~~~~~~d~~~~~i~i~~~~~~~~~~~~~~~~-~l~~~~~~iP~~k~~~f~~~~~----~~i~i~~~~~-~~~~~~~ig~~ 406 (763)
..+.+.|++|++|||+|.+ +.+ +||++|++||++++.+|++..+ +.|.+|+|+. ++.+|..||+|
T Consensus 18 ~~f~l~DV~P~slGie~~g---------g~~~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~VyqGE~~~~~dn~~LG~f 88 (182)
T 3n8e_A 18 LYFQSMDVTPLSLGIETLG---------GVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQF 88 (182)
T ss_dssp ------CBCSSCEEEECTT---------SBEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEE
T ss_pred CCEEEEEecCCEEEEEEeC---------CEEEEEEeCCCccCEEEEEEEEECCCCccEEEEEEEEcCccccccCceEEEE
Confidence 3578999999999999976 444 8999999999999999987544 8999999987 78899999999
Q ss_pred EeeccCCCCCCCcceEEEEEEEcCCccEEEEEeeeeEeeccCCCCCCCcccccccccccccccCCccccccccccccCCc
Q psy740 407 QINDVKPGPDNASQKVTVKVRVNMDGVIGVIAASMVEKVENSGDTESMDVENTEEENGQKQEAGSENTENKAEKTQEGQS 486 (763)
Q Consensus 407 ~i~~i~~~~~g~~~~i~v~~~vd~~Gil~v~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 486 (763)
.|.|++|+|+|.+ +|+|+|++|.||+|+|++.+ ..
T Consensus 89 ~l~gipp~p~G~~-~IeVtf~iD~nGiL~VsA~d---~~----------------------------------------- 123 (182)
T 3n8e_A 89 TLIGIPPAPRGVP-QIEVTFDIDANGIVHVSAKD---KG----------------------------------------- 123 (182)
T ss_dssp EECCCCCCCTTCS-CEEEEEEECTTCCEEEEEEE---TT-----------------------------------------
T ss_pred EEcCCCCCCCCCe-eEEEEEEEecCCEEEEEEEE---cC-----------------------------------------
Confidence 9999999999987 59999999999999999852 10
Q ss_pred chhHhHHHhhhccccceeeeeeEeecCCCCCHHHHHHHHHHHHhhhhchHHHHHHHHHhhhhHHHHHHHHHHcc
Q psy740 487 EDAEKKAAEAKKKVVSKTLDLTISATTHGLSPEQLNAHTELEGKMIADDKLEKERIDARNCLEEYVYDLRNKLG 560 (763)
Q Consensus 487 ~~~~~~~~~~~~K~~~k~~~~~i~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~ea~N~LEs~iy~~R~~L~ 560 (763)
..+...++|... .+||.++++++++++.++..+|++.+++.++||.||+|||.+|.+|+
T Consensus 124 --------------tg~~~~i~I~~~-~~Ls~eei~~mi~~a~~~~~eD~~~~~~~e~kn~le~~iy~~~~~l~ 182 (182)
T 3n8e_A 124 --------------TGREQQIVIQSS-GGLSKDDIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIHDTETKME 182 (182)
T ss_dssp --------------TCCEEEEEESCC-CCCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHCCSCCCC
T ss_pred --------------CCCEeeEEEecC-ccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 134556777776 79999999999999999999999999999999999999999998763
No 14
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.88 E-value=4.7e-22 Score=187.55 Aligned_cols=145 Identities=21% Similarity=0.367 Sum_probs=127.3
Q ss_pred EEEecccceEEEecCCCCCCCCCCce-EEEecCCCCcCceEEEEeeeCCC----EEEEEEEecC-cCCCCcccceEEeec
Q psy740 337 VTDLQVYPVVMEWDPSPNEPKDSKNF-ITVFPEMHAAPFSKKMTFYQNKP----FAIQLYYEGN-VPYPSKFIGKYQIND 410 (763)
Q Consensus 337 ~~d~~~~~i~i~~~~~~~~~~~~~~~-~~l~~~~~~iP~~k~~~f~~~~~----~~i~i~~~~~-~~~~~~~ig~~~i~~ 410 (763)
+.|++||+||++|.+ |. .+||++|++||++++.+|++..+ +.|.+|+|+. ++.+|..||+|.|.|
T Consensus 2 ~~Dv~p~slGi~~~g---------g~~~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~VyqGe~~~~~dn~~LG~f~l~g 72 (152)
T 3h0x_A 2 NADVNALTLGIETTG---------GVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNNLLGKFELTG 72 (152)
T ss_dssp -CCBCSSCEEEEETT---------TEEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECC
T ss_pred ccceeccEEEEEEcC---------CEEEEEEECcCccCEEEEEEEEeCCCCcceeeeeEEEcCccccccCcEEEEEEEeC
Confidence 679999999999976 44 48999999999999999987543 7999999987 888999999999999
Q ss_pred cCCCCCCCcceEEEEEEEcCCccEEEEEeeeeEeeccCCCCCCCcccccccccccccccCCccccccccccccCCcchhH
Q psy740 411 VKPGPDNASQKVTVKVRVNMDGVIGVIAASMVEKVENSGDTESMDVENTEEENGQKQEAGSENTENKAEKTQEGQSEDAE 490 (763)
Q Consensus 411 i~~~~~g~~~~i~v~~~vd~~Gil~v~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 490 (763)
++|+|+|.+ +|+|+|++|.||+|+|++.+ ..
T Consensus 73 ipp~p~G~~-~I~Vtf~iD~nGiL~V~a~d---~~--------------------------------------------- 103 (152)
T 3h0x_A 73 IPPAPRGVP-QIEVTFALDANGILKVSATD---KG--------------------------------------------- 103 (152)
T ss_dssp CCCCCTTCS-CEEEEEEECTTSEEEEEEEE---TT---------------------------------------------
T ss_pred CCCCCCCCc-eEEEEEEEcCCCEEEEEEEE---cC---------------------------------------------
Confidence 999999986 59999999999999999852 10
Q ss_pred hHHHhhhccccceeeeeeEeecCCCCCHHHHHHHHHHHHhhhhchHHHHHHHHHhhhhH
Q psy740 491 KKAAEAKKKVVSKTLDLTISATTHGLSPEQLNAHTELEGKMIADDKLEKERIDARNCLE 549 (763)
Q Consensus 491 ~~~~~~~~K~~~k~~~~~i~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~ea~N~LE 549 (763)
..+...++|.....+||.++++++++.+.+|..+|+..+++.++||+||
T Consensus 104 ----------tg~~~~i~I~~~~~~ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3h0x_A 104 ----------TGKSESITITNDKGRLTQEEIDRMVEEAEKFASEDASIKAKVESRNKLE 152 (152)
T ss_dssp ----------TCCEEEEEEECCTTCCCHHHHHHHHHHHHHTHHHHHHHHHHHHCSCCCC
T ss_pred ----------CCcEeEEEEecCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 1455677887766789999999999999999999999999999999997
No 15
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.87 E-value=6.7e-22 Score=186.11 Aligned_cols=145 Identities=19% Similarity=0.330 Sum_probs=122.9
Q ss_pred EEEecccceEEEecCCCCCCCCCCce-EEEecCCCCcCceEEEEeeeCCC----EEEEEEEecC-cCCCCcccceEEeec
Q psy740 337 VTDLQVYPVVMEWDPSPNEPKDSKNF-ITVFPEMHAAPFSKKMTFYQNKP----FAIQLYYEGN-VPYPSKFIGKYQIND 410 (763)
Q Consensus 337 ~~d~~~~~i~i~~~~~~~~~~~~~~~-~~l~~~~~~iP~~k~~~f~~~~~----~~i~i~~~~~-~~~~~~~ig~~~i~~ 410 (763)
+.|++||+||++|.+ |. .+||++|++||++++.+|++..+ +.|.+|+|+. ++.+|..||+|.|.|
T Consensus 2 ~~Dv~p~slGie~~g---------g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~LG~f~l~g 72 (152)
T 3dob_A 2 NADVAPLSLGIETAG---------GVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSG 72 (152)
T ss_dssp --CBCSSCEEEEETT---------TEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEEC
T ss_pred ceeeecceEEEEEcC---------CEEEEEEECcCccCEEEEEEEEECCCCceEEEEEEEEcCccccccCceeEEEEEeC
Confidence 679999999999986 44 47999999999999999987544 7899999987 888999999999999
Q ss_pred cCCCCCCCcceEEEEEEEcCCccEEEEEeeeeEeeccCCCCCCCcccccccccccccccCCccccccccccccCCcchhH
Q psy740 411 VKPGPDNASQKVTVKVRVNMDGVIGVIAASMVEKVENSGDTESMDVENTEEENGQKQEAGSENTENKAEKTQEGQSEDAE 490 (763)
Q Consensus 411 i~~~~~g~~~~i~v~~~vd~~Gil~v~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 490 (763)
++|+|+|.+ +|+|+|++|.||+|+|++.+ ..
T Consensus 73 ipp~p~G~~-~IeVtf~iD~nGiL~Vsa~d---~~--------------------------------------------- 103 (152)
T 3dob_A 73 IPPAPRGVP-QIEVTFNIDANGILNVSAED---KS--------------------------------------------- 103 (152)
T ss_dssp CCCCCTTCC-CEEEEEEECTTCCEEEEEEE---TT---------------------------------------------
T ss_pred CCCCCCCCc-eEEEEEEeCCCCeEEEEEEE---cC---------------------------------------------
Confidence 999999986 59999999999999999852 10
Q ss_pred hHHHhhhccccceeeeeeEeecCCCCCHHHHHHHHHHHHhhhhchHHHHHHHHHhhhhH
Q psy740 491 KKAAEAKKKVVSKTLDLTISATTHGLSPEQLNAHTELEGKMIADDKLEKERIDARNCLE 549 (763)
Q Consensus 491 ~~~~~~~~K~~~k~~~~~i~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~ea~N~LE 549 (763)
..+...++|.....+||.++++++++.+.++..+|++.+++.+++|.||
T Consensus 104 ----------tg~~~~i~I~~~~~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3dob_A 104 ----------TGKSNRITIQNEKGRLTQSDIDRMVHEAKQFEKEDGEQRERVQARNQLE 152 (152)
T ss_dssp ----------TCCEEEEEECCC----CHHHHHHHHHHHHHTHHHHHHHHHTCCCCSEEC
T ss_pred ----------CCCEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 1345567777766679999999999999999999999999999999987
No 16
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.86 E-value=6.8e-22 Score=185.84 Aligned_cols=144 Identities=19% Similarity=0.331 Sum_probs=125.5
Q ss_pred EEEecccceEEEecCCCCCCCCCCce-EEEecCCCCcCceEEEEeeeCCC----EEEEEEEecC-cCCCCcccceEEeec
Q psy740 337 VTDLQVYPVVMEWDPSPNEPKDSKNF-ITVFPEMHAAPFSKKMTFYQNKP----FAIQLYYEGN-VPYPSKFIGKYQIND 410 (763)
Q Consensus 337 ~~d~~~~~i~i~~~~~~~~~~~~~~~-~~l~~~~~~iP~~k~~~f~~~~~----~~i~i~~~~~-~~~~~~~ig~~~i~~ 410 (763)
+.|++||+||++|.+ |. .+||++|++||++++.+|++..+ +.|.+|+|+. ++.+|..||+|.|.|
T Consensus 2 ~~DV~p~slGie~~g---------g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~VyqGe~~~~~dn~~LG~f~l~g 72 (151)
T 3dqg_A 2 NADVTPLSLGIETLG---------GIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVG 72 (151)
T ss_dssp --CBCSSCEEEEETT---------TEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEEC
T ss_pred cceeeeeEEEEEEcC---------CEEEEEEECcCccCEEEEEEEEECCCCcceEEEEEEEcCCcccccCcEEEEEEEeC
Confidence 679999999999986 44 47999999999999999987544 8999999987 888999999999999
Q ss_pred cCCCCCCCcceEEEEEEEcCCccEEEEEeeeeEeeccCCCCCCCcccccccccccccccCCccccccccccccCCcchhH
Q psy740 411 VKPGPDNASQKVTVKVRVNMDGVIGVIAASMVEKVENSGDTESMDVENTEEENGQKQEAGSENTENKAEKTQEGQSEDAE 490 (763)
Q Consensus 411 i~~~~~g~~~~i~v~~~vd~~Gil~v~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 490 (763)
++|+|+|.+ +|+|+|++|.||+|+|++.+ ..
T Consensus 73 ipp~p~G~~-~IeVtf~iD~nGiL~Vsa~d---~~--------------------------------------------- 103 (151)
T 3dqg_A 73 IPPAPRGVP-QVEVTFDIDANGIVNVSARD---RG--------------------------------------------- 103 (151)
T ss_dssp CCCCCTTCS-CEEEEEEECTTSEEEEEEEE---TT---------------------------------------------
T ss_pred CCCCCCCCc-EEEEEEEeccCcEEEEEEEE---cc---------------------------------------------
Confidence 999999986 59999999999999999852 10
Q ss_pred hHHHhhhccccceeeeeeEeecCCCCCHHHHHHHHHHHHhhhhchHHHHHHHHHhhhhH
Q psy740 491 KKAAEAKKKVVSKTLDLTISATTHGLSPEQLNAHTELEGKMIADDKLEKERIDARNCLE 549 (763)
Q Consensus 491 ~~~~~~~~K~~~k~~~~~i~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~ea~N~LE 549 (763)
..+...++|... .+||.++++++++.+.++..+|++.+++.+++|.||
T Consensus 104 ----------tg~~~~i~I~~~-~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~~e 151 (151)
T 3dqg_A 104 ----------TGKEQQIVIQSS-GGLSKDQIENMIKEAEKNAAEDAKRKELVEVINQAE 151 (151)
T ss_dssp ----------TCCEEEEEEECS-SSSCHHHHHHHHHHHHHHHHHHTTCCCEEECBCCCC
T ss_pred ----------CCCEeEEEEecC-CCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcC
Confidence 134566788766 799999999999999999999999999999999986
No 17
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.85 E-value=8.1e-21 Score=180.09 Aligned_cols=146 Identities=21% Similarity=0.359 Sum_probs=125.5
Q ss_pred EEEecccceEEEecCCCCCCCCCCceEEEecCCCCcCceEEEEeeeCCC----EEEEEEEecC-cCCCCcccceEEeecc
Q psy740 337 VTDLQVYPVVMEWDPSPNEPKDSKNFITVFPEMHAAPFSKKMTFYQNKP----FAIQLYYEGN-VPYPSKFIGKYQINDV 411 (763)
Q Consensus 337 ~~d~~~~~i~i~~~~~~~~~~~~~~~~~l~~~~~~iP~~k~~~f~~~~~----~~i~i~~~~~-~~~~~~~ig~~~i~~i 411 (763)
+.|++||+|||++.+ + .+.+||++|++||++++.+|++..+ +.|.+|||+. ++.+|..||+|.|.|+
T Consensus 2 v~Dv~p~slGi~~~~----g----~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~lg~~~l~gi 73 (152)
T 2op6_A 2 NADVNPLTLGIETVG----G----VMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGI 73 (152)
T ss_dssp -CCBCSSCEEEEETT----T----EEEEEECTTCBSSEEEEEEEEESSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCC
T ss_pred ceEeecccEEEEEeC----C----EEEEEEeCCCcccEeEEEEEEeCCCCCcEEEEEEEEeCCccCccCCEeEEEEEECC
Confidence 579999999999976 1 3458999999999999999987544 9999999977 7788999999999999
Q ss_pred CCCCCCCcceEEEEEEEcCCccEEEEEeeeeEeeccCCCCCCCcccccccccccccccCCccccccccccccCCcchhHh
Q psy740 412 KPGPDNASQKVTVKVRVNMDGVIGVIAASMVEKVENSGDTESMDVENTEEENGQKQEAGSENTENKAEKTQEGQSEDAEK 491 (763)
Q Consensus 412 ~~~~~g~~~~i~v~~~vd~~Gil~v~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 491 (763)
+|.++|.+ +|+|+|.+|.||+|+|++.+. .
T Consensus 74 pp~p~G~~-~I~V~f~id~nGiL~V~a~d~---~---------------------------------------------- 103 (152)
T 2op6_A 74 PPAPRGVP-QIEVTFEIDVNGILHVSAEDK---G---------------------------------------------- 103 (152)
T ss_dssp CCCCTTCS-CEEEEEEECTTSCEEEEEEET---T----------------------------------------------
T ss_pred CCCCCCCc-eEEEEEEECCCcEEEEEEEEe---c----------------------------------------------
Confidence 99999997 599999999999999998521 0
Q ss_pred HHHhhhccccceeeeeeEeecCCCCCHHHHHHHHHHHHhhhhchHHHHHHHHHhhhhH
Q psy740 492 KAAEAKKKVVSKTLDLTISATTHGLSPEQLNAHTELEGKMIADDKLEKERIDARNCLE 549 (763)
Q Consensus 492 ~~~~~~~K~~~k~~~~~i~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~ea~N~LE 549 (763)
..+...++|.....+||.++++++++++.+|..+|+..+++.++||+||
T Consensus 104 ---------tg~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~kn~~e 152 (152)
T 2op6_A 104 ---------TGNKNKLTITNDHNRLSPEDIERMINDADKFAADDQAQKEKVESRNELE 152 (152)
T ss_dssp ---------TCCEEEEEECSSSSCCCHHHHHHHHHHHHHTHHHHHHHHHHSCCCSEEC
T ss_pred ---------CCcEEEEEeeccccCCCHHHHHHHHHHHHHhHhccHHHHHHHHHHhhcC
Confidence 1234456776655689999999999999999999999999999999987
No 18
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.74 E-value=2e-17 Score=172.99 Aligned_cols=159 Identities=18% Similarity=0.248 Sum_probs=135.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcEEEeecccCCHHHHHHHHHHHh---------------------------------
Q psy740 118 EQITAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAERKALLDAAK--------------------------------- 164 (763)
Q Consensus 118 eev~a~~L~~lk~~ae~~~~~~v~~~VITVPa~f~~~qR~al~~Aa~--------------------------------- 164 (763)
-+....+|++++..++...+..+..+|+|||++|+..+|+++..+++
T Consensus 70 ~~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~~~~viDiGgg 149 (272)
T 3h1q_A 70 YIGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGINDGIVVDIGGG 149 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCSSEEEEEECSS
T ss_pred HHHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCCCEEEEEECCC
Confidence 45568899999999999888888999999999999999999999987
Q ss_pred -----------HhhhcCCCCCchhHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHhccCCCceeeEEeec
Q psy740 165 -----------IIASAANPYLGGRNIDYKLAKHFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIEC 233 (763)
Q Consensus 165 -----------vl~~~~d~~lGG~d~D~~l~~~~~~~~~~~~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~~~~~ie~ 233 (763)
++ ......+||.+||+.|.+++. .+ ...|+++|+.++
T Consensus 150 st~~~~~~~g~~~-~~~~~~~Gg~~~~~~l~~~l~--------~~-----------~~~ae~~k~~~~------------ 197 (272)
T 3h1q_A 150 TTGIAVIEKGKIT-ATFDEPTGGTHLSLVLAGSYK--------IP-----------FEEAETIKKDFS------------ 197 (272)
T ss_dssp CEEEEEEETTEEE-EECCBSCCHHHHHHHHHHHHT--------CC-----------HHHHHHHHHSST------------
T ss_pred cEEEEEEECCEEE-EEecCCCcHHHHHHHHHHHhC--------CC-----------HHHHHHHHHhcC------------
Confidence 11 234567999999999998764 11 357889998876
Q ss_pred cccCcccEEEeeHHHHHHHhHHHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcCCCCCCCCChhH
Q psy740 234 FMNDIDVKGEMCRSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQKTPSTTLNQDE 313 (763)
Q Consensus 234 l~~~~d~~~~itr~~fe~l~~~l~~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg~~~~~~~n~de 313 (763)
++++|++++.++++++...+.+.|+..+ +++.|+|+||++++|.+++.|++.||.++..+.||++
T Consensus 198 -----------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l~~~l~~~l~~~v~~~~~p~~ 262 (272)
T 3h1q_A 198 -----------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGFSEEFSRFLGKEVQVPIHPLL 262 (272)
T ss_dssp -----------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTHHHHHHHHHSSCCBCCSSGGG
T ss_pred -----------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccchhhHHHHHHHHhCCCccccCChHH
Confidence 5899999999999999999999998664 4789999999999999999999999999988999999
Q ss_pred HHHhHHHHHc
Q psy740 314 AVARGCALQC 323 (763)
Q Consensus 314 aVa~GAa~~a 323 (763)
++|+|||++|
T Consensus 263 a~a~Gaal~a 272 (272)
T 3h1q_A 263 VTPLGIALFG 272 (272)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHhcC
Confidence 9999999875
No 19
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.71 E-value=9.9e-18 Score=183.95 Aligned_cols=268 Identities=15% Similarity=0.198 Sum_probs=163.6
Q ss_pred ceEEEEcCccceEEEEEECCceeEEcCCCCCccccEEEEeeCCceEEcHHHHHhHhhccCchHHHhhhhhCCCCCChHHH
Q psy740 5 SVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFSDRNRILGVAAKNQTVTNMKNTIHGFKRLIGREFKDPHVQ 84 (763)
Q Consensus 5 ~viGID~GTt~s~va~~~~g~~~iv~n~~~~r~~PS~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~KrllG~~~~d~~~~ 84 (763)
.++|||+||++++++++.+|++.+ +..|.+.+||.+. . .....++..+...+|+++++.-
T Consensus 14 ~~vgiDiGt~~i~~~~~~~~~~~i--~~~g~~~~ps~~~-~-----------~g~i~d~~~~~~~ik~~~~~~~------ 73 (377)
T 2ych_A 14 EALGLEIGASALKLVEVSGNPPAL--KALASRPTPPGLL-M-----------EGMVAEPAALAQEIKELLLEAR------ 73 (377)
T ss_dssp CCEEEEECSSEEEEEEEETTTTEE--EEEEEEECCTTSE-E-----------TTEESCHHHHHHHHHHHHHHHT------
T ss_pred ceEEEEeCCCeEEEEEEeCCceEE--EEEEeEECCCCcc-c-----------CCCcCCHHHHHHHHHHHHHHcC------
Confidence 589999999999999988776544 3345555666432 1 1123466777888888887510
Q ss_pred hhhhcCCceeeeCCCCCeEEEEEecCCceeeCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecccCCHHH---------
Q psy740 85 DELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQITAMLLTKLRETSEIALQCNISDCVLSVPSFYTNAE--------- 155 (763)
Q Consensus 85 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~peev~a~~L~~lk~~ae~~~~~~v~~~VITVPa~f~~~q--------- 155 (763)
.+ ...-.+..+.+.+..+... ...++++++... ++..++.+++.++.++||++|. .+.+
T Consensus 74 --~~-~~~v~~~i~~~~~~~~~~~---~~~v~~~el~~~----i~~ea~~~~~~~~~~~vid~~~--~~~~~~~~~~~~~ 141 (377)
T 2ych_A 74 --TR-KRYVVTALSNLAVILRPIQ---VPKMPLKEMEEA----VRWEAERYIPFPIDEVVLDFAP--LTPLSEVQEGEQV 141 (377)
T ss_dssp --CC-CCEEEEEECGGGCEEEEEE---EECCCHHHHHHH----HHHHHGGGCSSCC-CEEEEEEE--SSCGGGSCTTSEE
T ss_pred --CC-cceEEEEecCCcEEEEEEE---CCCCCHHHHHHH----HHHHHhhcCCCChhHceEEEEE--eCCCCCCCCccee
Confidence 00 0000111222222222111 145888887654 3457788899999999999983 3332
Q ss_pred -----------HHHHHHHHh--------------------------------------------------HhhhcCCCCC
Q psy740 156 -----------RKALLDAAK--------------------------------------------------IIASAANPYL 174 (763)
Q Consensus 156 -----------R~al~~Aa~--------------------------------------------------vl~~~~d~~l 174 (763)
.+++.+|++ .+...++..+
T Consensus 142 ~v~~va~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~g~~~~~~~~~~ 221 (377)
T 2ych_A 142 QVMVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPLAVRVLTL 221 (377)
T ss_dssp EEEEEEEEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEETTEEEEEEEESC
T ss_pred EEEEEEecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEECCEEEEEEeeec
Confidence 267777777 1112345579
Q ss_pred chhHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHhccCCCceeeEEeeccccCcccEEEeeHHHHHHHhH
Q psy740 175 GGRNIDYKLAKHFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMCRSEMEELCK 254 (763)
Q Consensus 175 GG~d~D~~l~~~~~~~~~~~~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~~~~~ie~l~~~~d~~~~itr~~fe~l~~ 254 (763)
||.+||+.|++. ++++ +.+||++|+.++.... .....+..++-.+....++|++|+++++
T Consensus 222 GG~~i~~~i~~~--------~~~~-----------~~~aE~~K~~~~~~~~-~~~~~~~~i~~~~~~~~i~~~~~~~~i~ 281 (377)
T 2ych_A 222 SGKDFTEAIARS--------FNLD-----------LLAAEEVKRTYGMATL-PTEDEELLLDFDAERERYSPGRIYDAIR 281 (377)
T ss_dssp SHHHHHHHHHHH--------TTCC-----------HHHHHHHHHHTC--------------------------CHHHHHH
T ss_pred hHHHHHHHHHHH--------hCCC-----------HHHHHHHHhhcccccc-cccccccccccccccccCCHHHHHHHHH
Confidence 999999999872 2222 4689999999986321 0001011111112345799999999999
Q ss_pred HHHHHHHHHHHHHHHH--cCCCCCCccEEEEecCCCCcHHHHHHHHHhcCCCCCCC--------------------CChh
Q psy740 255 DVFENVEKTLKDCLEK--SKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQKTPSTT--------------------LNQD 312 (763)
Q Consensus 255 ~l~~~i~~~i~~~l~~--a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg~~~~~~--------------------~n~d 312 (763)
+.++++...|+++|+. ++.....++.|+|+||+|++|.+++.|++.||.++... .+|.
T Consensus 282 ~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~~~v~~~~P~~~v~~~~~~~~~~~l~~~~p~ 361 (377)
T 2ych_A 282 PVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLGVNLEPVNPWEAVAVDPKRFESEQLQEIGPE 361 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHTSEEEECCGGGGSBCCTTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhCCCeEecCchhhcccCcccCCHHHHHhhhHH
Confidence 9999999999999995 35666789999999999999999999999998643221 1345
Q ss_pred HHHHhHHHHHcc
Q psy740 313 EAVARGCALQCA 324 (763)
Q Consensus 313 eaVa~GAa~~aa 324 (763)
.++|.|+|+++.
T Consensus 362 ~a~a~Glal~~~ 373 (377)
T 2ych_A 362 FAVALGLALRGV 373 (377)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHcCC
Confidence 667888888763
No 20
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.70 E-value=2.8e-17 Score=182.88 Aligned_cols=176 Identities=14% Similarity=0.184 Sum_probs=125.5
Q ss_pred CCcEEEeecccCCHHHHHHHHHHH-h----------------Hhh-----------------------------------
Q psy740 140 ISDCVLSVPSFYTNAERKALLDAA-K----------------IIA----------------------------------- 167 (763)
Q Consensus 140 v~~~VITVPa~f~~~qR~al~~Aa-~----------------vl~----------------------------------- 167 (763)
...+|||+|++|+..+|+++.+++ + ..+
T Consensus 107 ~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~~~~glVvDiG~gtt~v~~v~~G~~~ 186 (418)
T 1k8k_A 107 DHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVI 186 (418)
T ss_dssp GCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSCCCCEEEEEESSSCEEEEEEETTEEC
T ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCCCCeEEEEEcCCCceEEEEeECCEEc
Confidence 457999999999999999999998 4 111
Q ss_pred --hcCCCCCchhHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHhccCCCc----------------eeeE
Q psy740 168 --SAANPYLGGRNIDYKLAKHFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANST----------------KLPF 229 (763)
Q Consensus 168 --~~~d~~lGG~d~D~~l~~~~~~~~~~~~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~----------------~~~~ 229 (763)
..++..+||++||+.|.++|..++. ..+.. .-...|+++|+.++.-.. ...+
T Consensus 187 ~~~~~~~~lGG~~lt~~l~~~l~~~~~---~~~~~-------~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~ 256 (418)
T 1k8k_A 187 GSCIKHIPIAGRDITYFIQQLLRDREV---GIPPE-------QSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQY 256 (418)
T ss_dssp GGGCEEESCSHHHHHHHHHHHHHTTCC---CCCGG-------GHHHHHHHHHHHHCCCCSCHHHHHHHHHHSGGGTCEEE
T ss_pred ccceEEEeCcHHHHHHHHHHHHHhcCC---CCCCH-------HHHHHHHHHHHhhchhcccHHHHHHhhcccccccceeE
Confidence 1134469999999999999986542 11111 113467888888764211 1235
Q ss_pred EeeccccCcccEEEeeHHHH---HHHhHHHH------HHHHHHHHHHHHHcC--CCCCCccEEEEecCCCCcHHHHHHHH
Q psy740 230 GIECFMNDIDVKGEMCRSEM---EELCKDVF------ENVEKTLKDCLEKSK--LALSDIHSVEIVGGSSRIPAIKGLIE 298 (763)
Q Consensus 230 ~ie~l~~~~d~~~~itr~~f---e~l~~~l~------~~i~~~i~~~l~~a~--~~~~~i~~V~lvGGssriP~v~~~l~ 298 (763)
.+.....+.+..++|+++.| |.+++|.+ ..+.++|.++|..+. +....++.|+|+||+|++|.+++.|.
T Consensus 257 ~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg~~~rl~ 336 (418)
T 1k8k_A 257 TGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQ 336 (418)
T ss_dssp EEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTTHHHHHH
T ss_pred ECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCccccccHHHHHH
Confidence 55544445566889999999 55655542 568889999998765 33455789999999999999999998
Q ss_pred HhcCC------------------------CCCCCCChhHHHHhHHHHHcch
Q psy740 299 KIFQK------------------------TPSTTLNQDEAVARGCALQCAM 325 (763)
Q Consensus 299 ~~fg~------------------------~~~~~~n~deaVa~GAa~~aa~ 325 (763)
+.|+. .+..+.++..++.+||+++|..
T Consensus 337 ~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 387 (418)
T 1k8k_A 337 RDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST 387 (418)
T ss_dssp HHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTS
T ss_pred HHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcC
Confidence 76531 1223346789999999999963
No 21
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.69 E-value=2.6e-17 Score=177.91 Aligned_cols=173 Identities=16% Similarity=0.153 Sum_probs=127.5
Q ss_pred eeCHHHHHHHHHHHHHHHHHHHhcCCCCcEE--EeecccCCHHHHHHHHHHHh---------------------------
Q psy740 114 VFTPEQITAMLLTKLRETSEIALQCNISDCV--LSVPSFYTNAERKALLDAAK--------------------------- 164 (763)
Q Consensus 114 ~~~peev~a~~L~~lk~~ae~~~~~~v~~~V--ITVPa~f~~~qR~al~~Aa~--------------------------- 164 (763)
.+.++...++++..|+..++...+.. .++| |+||++|+..||+++++|+.
T Consensus 94 ~~~~~~~~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep 172 (346)
T 2fsj_A 94 RLASKEAFPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQG 172 (346)
T ss_dssp CTTSTTTHHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETT
T ss_pred cccChhHHHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccH
Confidence 45557778888888887653333333 5699 99999999999999999832
Q ss_pred ------------------------------------------HhhhcCCCCCchhHHHHHHHHHHHHHHHhhcCC--CCC
Q psy740 165 ------------------------------------------IIASAANPYLGGRNIDYKLAKHFSQEFKQKYNI--EPE 200 (763)
Q Consensus 165 ------------------------------------------vl~~~~d~~lGG~d~D~~l~~~~~~~~~~~~~~--~~~ 200 (763)
|.+++++..+||.+|++.|+++|..+|. . ++.
T Consensus 173 ~AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~~v~~~s~~~~lGg~~i~~~I~~~i~~~~g----~~~~i~ 248 (346)
T 2fsj_A 173 VGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIGVGDAISALSRKIAKETG----FVVPFD 248 (346)
T ss_dssp HHHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTEECGGGCEEESCCHHHHHHHHHHHHHHHHC----CCCCHH
T ss_pred HHHHHHhhccccccccCCcEEEEECCCCcEEEEEEEecCCEEEeecCCCcchhHHHHHHHHHHHHHHHhC----CCcCCC
Confidence 2333466679999999999988776654 3 211
Q ss_pred CCHHHHHHHHHHHHHHHHhccCCCceeeEEeeccccCcccEEEeeHHHH-HHHhHHHHHHHHHHHHHHHHHcCCCCCCcc
Q psy740 201 SNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEMCRSEM-EELCKDVFENVEKTLKDCLEKSKLALSDIH 279 (763)
Q Consensus 201 ~~~~~~~rL~~~aek~K~~LS~~~~~~~~~ie~l~~~~d~~~~itr~~f-e~l~~~l~~~i~~~i~~~l~~a~~~~~~i~ 279 (763)
...++ ... .+.+ .+. .+++++| +++++++++++.+.|+++|+.+ .++++
T Consensus 249 ---------~~~~e-------~~~---~~~~----~g~----~~~~~~i~~~~i~~~~~~i~~~i~~~l~~~---~~~i~ 298 (346)
T 2fsj_A 249 ---------LAQEA-------LSH---PVMF----RQK----QVGGPEVSGPILEDLANRIIENIRLNLRGE---VDRVT 298 (346)
T ss_dssp ---------HHHHH-------TTS---CEEE----TTE----EECSHHHHHHHHHHHHHHHHHHHHHHHGGG---GGGEE
T ss_pred ---------HHHHh-------cCC---eEeE----CCc----cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhccc
Confidence 11222 111 1232 232 3569999 9999999999999999999876 55789
Q ss_pred EEEEecCCCCcHHHHHHHHHhcCCCCCC---CCChhHHHHhHHHHHcc
Q psy740 280 SVEIVGGSSRIPAIKGLIEKIFQKTPST---TLNQDEAVARGCALQCA 324 (763)
Q Consensus 280 ~V~lvGGssriP~v~~~l~~~fg~~~~~---~~n~deaVa~GAa~~aa 324 (763)
.|+|+||++++ +++.|++.|+. ... ..||++|+|+|+..++.
T Consensus 299 ~IvL~GGga~l--l~~~l~~~~~~-~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 299 SLIPVGGGSNL--IGDRFEEIAPG-TLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp EEEEESTTHHH--HGGGGGGGSTT-CBCCCCTTTTTTHHHHHHHHHHH
T ss_pred EEEEECCcHHH--HHHHHHHHCcC-cEEeccCCCcHHHHHHHHHHHHh
Confidence 99999999999 99999999974 223 66999999999998653
No 22
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.67 E-value=1.2e-16 Score=175.16 Aligned_cols=261 Identities=13% Similarity=0.118 Sum_probs=156.0
Q ss_pred cceEEEEcCccceEEEEEECCcee-EEcCCCCCccccE-EEEeeCCceEEcHHHHHhHhhccCchHHHhhhhhCCCCCCh
Q psy740 4 MSVIGIDFGNESCFIAAARAGGIE-TIANDYSLRATPS-CVAFSDRNRILGVAAKNQTVTNMKNTIHGFKRLIGREFKDP 81 (763)
Q Consensus 4 ~~viGID~GTt~s~va~~~~g~~~-iv~n~~~~r~~PS-~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~KrllG~~~~d~ 81 (763)
+..|+||+||++++++++.++.+. ++++-.|....++ .+.+..+..++|+.|... +. ...++
T Consensus 5 ~~~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~----~~--~~~~~---------- 68 (375)
T 2fxu_A 5 TTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK----RG--ILTLK---------- 68 (375)
T ss_dssp CCCEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC-------CCEEHHHHHHH----TT--SEEEE----------
T ss_pred CceEEEECCCCeEEEEECCCCCCceeeccccccccccccccCCCCCCeEechhHhhc----Cc--cccee----------
Confidence 467999999999999997655433 3333333222221 122223456788888653 00 01111
Q ss_pred HHHhhhhcCCceeeeCCCCCeEEEEEecCCceeeCHHHHHHHHHHHHHHHHHHHhcCC--CCcEEEeecccCCHHHHHHH
Q psy740 82 HVQDELKFLPYNVSENPDGSIGIKVKYLNEDRVFTPEQITAMLLTKLRETSEIALQCN--ISDCVLSVPSFYTNAERKAL 159 (763)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~peev~a~~L~~lk~~ae~~~~~~--v~~~VITVPa~f~~~qR~al 159 (763)
+|+ .+|. +.--+....+++|+.. ..++.. -..+|||+|++++..+|+++
T Consensus 69 --------~Pi-----~~G~-------------i~d~d~~e~i~~~~~~---~~L~~~~~~~~vvit~p~~~~~~~r~~~ 119 (375)
T 2fxu_A 69 --------YPI-----EHGI-------------ITNWDDMEKIWHHTFY---NELRVAPEEHPTLLTEAPLNPKANREKM 119 (375)
T ss_dssp --------CSE-----ETTE-------------ECCHHHHHHHHHHHHH---TTSCCCGGGSCEEEEECTTCCHHHHHHH
T ss_pred --------ccc-----cCCc-------------ccCHHHHHHHHHHHHH---HhcCCCCcCCcEEEEeCCCCcHHHHHHH
Confidence 111 1111 1111233444554442 223322 24599999999999999998
Q ss_pred HHHHh----------------------------------------------HhhhcCCCCCchhHHHHHHHHHHHHHHHh
Q psy740 160 LDAAK----------------------------------------------IIASAANPYLGGRNIDYKLAKHFSQEFKQ 193 (763)
Q Consensus 160 ~~Aa~----------------------------------------------vl~~~~d~~lGG~d~D~~l~~~~~~~~~~ 193 (763)
.+++- +....+...+||++||+.|.+++..+.
T Consensus 120 ~e~~fe~~g~~~~~~~~e~~aaa~a~g~~~~lVvDiG~gtt~v~~v~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~-- 197 (375)
T 2fxu_A 120 TQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERG-- 197 (375)
T ss_dssp HHHHHHTTCCSEEEEEEHHHHHHHHTTCSSEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHHT--
T ss_pred HHHHHHhcCcceEEEccchheeeeecCCCeEEEEEcCCCceEEeEeECCEEeccceEEeccCHHHHHHHHHHHHHhcC--
Confidence 88763 333344568999999999999998762
Q ss_pred hcCCCCCCCHHHHHHHHHHHHHHHHhccCCC---------------ceeeEEeeccccCcccEEEeeHHHH---HHHhHH
Q psy740 194 KYNIEPESNPRAFLRLLTEVEKLKKQMSANS---------------TKLPFGIECFMNDIDVKGEMCRSEM---EELCKD 255 (763)
Q Consensus 194 ~~~~~~~~~~~~~~rL~~~aek~K~~LS~~~---------------~~~~~~ie~l~~~~d~~~~itr~~f---e~l~~~ 255 (763)
+ .... ..-...++++|+.++.-. ....+.+. ++ ..+.|+++.| |.+++|
T Consensus 198 -~--~~~~-----~~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~lp---dg--~~i~i~~erf~~~E~lf~p 264 (375)
T 2fxu_A 198 -Y--SFVT-----TAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELP---DG--QVITIGNERFRCPETLFQP 264 (375)
T ss_dssp -C--CCCS-----HHHHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECT---TS--CEEEESTHHHHHHHTTTCG
T ss_pred -C--CCCc-----HHHHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEECC---CC--CEEEEChhheechHhhCCC
Confidence 1 1211 011234566666554211 01222222 22 3568899988 444444
Q ss_pred H-----HHHHHHHHHHHHHHcC--CCCCCccEEEEecCCCCcHHHHHHHHHhcC--------CCCCCCCChhHHHHhHHH
Q psy740 256 V-----FENVEKTLKDCLEKSK--LALSDIHSVEIVGGSSRIPAIKGLIEKIFQ--------KTPSTTLNQDEAVARGCA 320 (763)
Q Consensus 256 l-----~~~i~~~i~~~l~~a~--~~~~~i~~V~lvGGssriP~v~~~l~~~fg--------~~~~~~~n~deaVa~GAa 320 (763)
. ...+.++|.++|..+. +....++.|+|+||+|++|.+++.|.+.|+ .++....||+.+|++||+
T Consensus 265 ~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v~v~~~~~p~~~~w~G~s 344 (375)
T 2fxu_A 265 SFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 344 (375)
T ss_dssp GGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHSCTTCCCCEECCTTTTSHHHHHHH
T ss_pred ccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhCCCCeeEEEEcCCCCCccEEcchH
Confidence 3 2457888888888653 223345889999999999999999999874 223456799999999999
Q ss_pred HHcc
Q psy740 321 LQCA 324 (763)
Q Consensus 321 ~~aa 324 (763)
++|.
T Consensus 345 i~a~ 348 (375)
T 2fxu_A 345 ILAS 348 (375)
T ss_dssp HHHH
T ss_pred HhhC
Confidence 9997
No 23
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.59 E-value=3.5e-14 Score=156.90 Aligned_cols=137 Identities=12% Similarity=0.128 Sum_probs=105.5
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHhccCC----CceeeEEeeccccCcccEEEe
Q psy740 169 AANPYLGGRNIDYKLAKHFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSAN----STKLPFGIECFMNDIDVKGEM 244 (763)
Q Consensus 169 ~~d~~lGG~d~D~~l~~~~~~~~~~~~~~~~~~~~~~~~rL~~~aek~K~~LS~~----~~~~~~~ie~l~~~~d~~~~i 244 (763)
.++..+||++||+.|+.++. ....+||++|+.++.. .....+.+..+. ......|
T Consensus 231 ~~~i~~GG~~it~dIa~~l~-------------------~~~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~--~~~~~~i 289 (419)
T 4a2a_A 231 ISYVPVGMKHVIKDVSAVLD-------------------TSFEESERLIITHGNAVYNDLKEEEIQYRGLD--GNTIKTT 289 (419)
T ss_dssp EEEESCCHHHHHHHHHHHHT-------------------CCHHHHHHHHHHHCCSCCTTCCCCEEEEECTT--SCSEEEE
T ss_pred EEecccHHHHHHHHHHHHHC-------------------CCHHHHHHHHHHhccCcccCCCCceEEEeecC--CccceEE
Confidence 45668999999999987542 1246899999998742 112356666553 2466799
Q ss_pred eHHHHHHHhHHHHHHHHHHHHHHHHHcCCC------CCCccEEEEecCCCCcHHHHHHHHHhcCCCCC--C-----C---
Q psy740 245 CRSEMEELCKDVFENVEKTLKDCLEKSKLA------LSDIHSVEIVGGSSRIPAIKGLIEKIFQKTPS--T-----T--- 308 (763)
Q Consensus 245 tr~~fe~l~~~l~~~i~~~i~~~l~~a~~~------~~~i~~V~lvGGssriP~v~~~l~~~fg~~~~--~-----~--- 308 (763)
+|++|.++++|.++++...|+++|+.++.+ ...++.|+|+||+|++|.|++++++.||.++. . +
T Consensus 290 s~~~l~~ii~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~~vri~~~~~~~p~~~ 369 (419)
T 4a2a_A 290 TAKKLSVIIHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKSPVRTGCYANSDRPSI 369 (419)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHTSCEEECCGGGSSSCCC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHCCCeEEEecCCCCchhc
Confidence 999999999999999999999999999983 45689999999999999999999999986532 2 1
Q ss_pred -------CChhHHHHhHHHHHcchh
Q psy740 309 -------LNQDEAVARGCALQCAML 326 (763)
Q Consensus 309 -------~n~deaVa~GAa~~aa~l 326 (763)
-+|..++|.|.+++++..
T Consensus 370 ~~~~~~~~~P~~~t~~Gl~~~~~~~ 394 (419)
T 4a2a_A 370 INADEVANDPSFAAAFGNVFAVSEN 394 (419)
T ss_dssp BTCHHHHTCGGGHHHHHTTCC----
T ss_pred cCcccccCCchHHHHHHHHHHHhhc
Confidence 489999999999988654
No 24
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.57 E-value=5.8e-15 Score=136.12 Aligned_cols=99 Identities=16% Similarity=0.306 Sum_probs=82.5
Q ss_pred ccccEEEEecccceEEEecCCCCCCCCCCceEEEecCCCCcCceEEEEeeeCC----CEEEEEEEecC-cCCCCcccceE
Q psy740 332 VRDFSVTDLQVYPVVMEWDPSPNEPKDSKNFITVFPEMHAAPFSKKMTFYQNK----PFAIQLYYEGN-VPYPSKFIGKY 406 (763)
Q Consensus 332 ~~~~~~~d~~~~~i~i~~~~~~~~~~~~~~~~~l~~~~~~iP~~k~~~f~~~~----~~~i~i~~~~~-~~~~~~~ig~~ 406 (763)
++++.+.|++|++|||++.+ + .+.+||++|+++|++++.+|++.. .+.|.+|||+. ++.+|..||+|
T Consensus 14 ~~d~~l~Dv~p~slGIe~~~----g----~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~~n~~Lg~f 85 (135)
T 1q5l_A 14 PRGSHMVDVTPLSLGIETMG----G----VMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQF 85 (135)
T ss_dssp -------CCCSSCCCEEETT----T----EECCSSCSSSCSSBCCEEEECCCSSSCSSCEEEEEECCSSSCSSSEEEEEE
T ss_pred eCcEEEEEeecCcEEEEEEC----C----EEEEEEcCCCeEeEeEeEEEEeccCCceEEEEEEEEeCCcccccCcEEEEE
Confidence 56889999999999999975 1 344799999999999999997643 49999999987 78899999999
Q ss_pred EeeccCCCCCCCcceEEEEEEEcCCccEEEEEe
Q psy740 407 QINDVKPGPDNASQKVTVKVRVNMDGVIGVIAA 439 (763)
Q Consensus 407 ~i~~i~~~~~g~~~~i~v~~~vd~~Gil~v~~~ 439 (763)
.|.|++|+++|.+ +|+|+|++|.||+|+|++.
T Consensus 86 ~l~gipp~p~G~~-~IeVtf~iD~nGiL~V~a~ 117 (135)
T 1q5l_A 86 NLDGINPAPRGMP-QIEVTFDIDADGILHVSAK 117 (135)
T ss_dssp ECCCCCSCCSSSC-CEEEEEEECTTSEEEEEEE
T ss_pred EEeCCCCCCCcee-EEEEEEEECCCCEEEEEEE
Confidence 9999999999997 6999999999999999985
No 25
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.38 E-value=6.8e-14 Score=149.72 Aligned_cols=125 Identities=16% Similarity=0.144 Sum_probs=81.4
Q ss_pred hcCCCCCchhHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHH-HHhccCCCceeeEEeeccccCcccEEEeeH
Q psy740 168 SAANPYLGGRNIDYKLAKHFSQEFKQKYNIEPESNPRAFLRLLTEVEKL-KKQMSANSTKLPFGIECFMNDIDVKGEMCR 246 (763)
Q Consensus 168 ~~~d~~lGG~d~D~~l~~~~~~~~~~~~~~~~~~~~~~~~rL~~~aek~-K~~LS~~~~~~~~~ie~l~~~~d~~~~itr 246 (763)
+.++..+||.+||+.|++++.++ +.++. ...|+++ |.. . . .. ......+ . .-++
T Consensus 191 ~~~~~~lGg~~~~~~I~~~l~~~-----~~~i~---------~~~ae~~lk~~-~--~-~~--~~~~~i~---~--~~~~ 245 (320)
T 2zgy_A 191 IYGDSSLGVSLVTSAVKDALSLA-----RTKGS---------SYLADDIIIHR-K--D-NN--YLKQRIN---D--ENKI 245 (320)
T ss_dssp EEEECSCCTHHHHHHHHHHTTCC-----SBGGG---------HHHHHHHHHTT-T--C-HH--HHHHHSS---S--SCTH
T ss_pred ecCCccccHHHHHHHHHHHHHHc-----CCCCC---------HHHHHHHHHHh-h--h-hh--cccceec---C--chhh
Confidence 35677899999999999988642 22221 1234444 332 0 0 00 0000000 0 1134
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcCC---CCCCCCChhHHHHhHHHHHc
Q psy740 247 SEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQK---TPSTTLNQDEAVARGCALQC 323 (763)
Q Consensus 247 ~~fe~l~~~l~~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg~---~~~~~~n~deaVa~GAa~~a 323 (763)
+++.+++.+.++.+.+.|.+.+++ ..+++.|+|+||+|++ +++.|++.|+. ++....||++|+|+||++++
T Consensus 246 ~~~~~~i~~~~~~~~~~i~~~i~~----~~~~~~vvl~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 246 SIVTEAMNEALRKLEQRVLNTLNE----FSGYTHVMVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT----CCCCCEEEEESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh----hcCCCeEEEECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 555566666666666666665554 2578999999999998 99999999987 46778899999999999875
No 26
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.30 E-value=8.3e-13 Score=138.15 Aligned_cols=74 Identities=18% Similarity=0.174 Sum_probs=59.6
Q ss_pred HHHhHHHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcCCCCCCCCChhHHHHhHHHHHcchhc
Q psy740 250 EELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQKTPSTTLNQDEAVARGCALQCAMLS 327 (763)
Q Consensus 250 e~l~~~l~~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg~~~~~~~n~deaVa~GAa~~aa~ls 327 (763)
++++..+...+.+.+....... .+++.|+|+||++++|.|++.|++.||.++..+.||++++|+|||++|....
T Consensus 183 ~di~a~~~~~v~~~l~~~~~~~----~~~~~vvl~GGva~n~~lr~~l~~~~g~~~~~p~~p~~~~A~GAAl~A~~~~ 256 (276)
T 4ehu_A 183 EDIVAGIHTSVAKRVSSLVKRI----GVQRNVVMVGGVARNSGIVRAMAREINTEIIVPDIPQLTGALGAALYAFDEA 256 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH----CCCSSEEEESGGGGCHHHHHHHHHHHTSCEECCSSGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhc----ccCCeEEEecCccchHHHHHHHHHHHCCCeeeCCCcchHHHHHHHHHHHHHH
Confidence 4566666666655555444433 4578899999999999999999999999999999999999999999996543
No 27
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.28 E-value=1.6e-12 Score=142.96 Aligned_cols=168 Identities=14% Similarity=0.208 Sum_probs=74.6
Q ss_pred CcEEEeecccCCHHHHHHHHHHHh----------------------------------------------HhhhcCCCCC
Q psy740 141 SDCVLSVPSFYTNAERKALLDAAK----------------------------------------------IIASAANPYL 174 (763)
Q Consensus 141 ~~~VITVPa~f~~~qR~al~~Aa~----------------------------------------------vl~~~~d~~l 174 (763)
..+|||+|++++..+|+++.+++- +........+
T Consensus 105 ~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~~~~lVVDiG~g~T~v~pv~~G~~~~~~~~~~~~ 184 (394)
T 1k8k_B 105 CKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDI 184 (394)
T ss_dssp -------------------------------------------------CCEEEECSSCEEEECEETTEECSTTCEEESC
T ss_pred CcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCCceEEEEEcCCCceEeeeeECCEEcccceEEeec
Confidence 359999999999999999888653 1111234479
Q ss_pred chhHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHhccCCCc---------------eeeEEeeccccCcc
Q psy740 175 GGRNIDYKLAKHFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANST---------------KLPFGIECFMNDID 239 (763)
Q Consensus 175 GG~d~D~~l~~~~~~~~~~~~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~---------------~~~~~ie~l~~~~d 239 (763)
||+++|+.|.+++..+. +....... ...|+.+|+.++.-.. ...+.+ -++
T Consensus 185 GG~~lt~~l~~~l~~~~---~~~~~~~~-------~~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~~~~~l---pdg-- 249 (394)
T 1k8k_B 185 AGRDITRYLIKLLLLRG---YAFNHSAD-------FETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTL---PDG-- 249 (394)
T ss_dssp CHHHHHHHHHHHHHHTT---CCCCTTTT-------HHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEEC---TTS--
T ss_pred cHHHHHHHHHHHHHhcC---CCCCcHHH-------HHHHHHHHHhheeEecCHHHHHHhhccCCcCceEEEC---CCC--
Confidence 99999999999988641 22211112 2345667776653210 011221 122
Q ss_pred cEEEeeHHHHHHHhHHHH---------HHHHHHHHHHHHHcCCC--CCCccEEEEecCCCCcHHHHHHHHHhcCC-----
Q psy740 240 VKGEMCRSEMEELCKDVF---------ENVEKTLKDCLEKSKLA--LSDIHSVEIVGGSSRIPAIKGLIEKIFQK----- 303 (763)
Q Consensus 240 ~~~~itr~~fe~l~~~l~---------~~i~~~i~~~l~~a~~~--~~~i~~V~lvGGssriP~v~~~l~~~fg~----- 303 (763)
..++|+++.|. +.+-|| ..+.++|.++|..+... ..-++.|+|+||+|++|.+.+.|.+.++.
T Consensus 250 ~~i~i~~erf~-~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~~el~~~~~~~ 328 (394)
T 1k8k_B 250 RIIKVGGERFE-APEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLER 328 (394)
T ss_dssp CEEEECTHHHH-TGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHHHHHHHHHHHH
T ss_pred CEEEECchhhc-ChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHHHHHHHHHhhh
Confidence 25678888884 233332 34778888888877433 23357899999999999999999887642
Q ss_pred ------------C--CCCCCChhHHHHhHHHHHcc
Q psy740 304 ------------T--PSTTLNQDEAVARGCALQCA 324 (763)
Q Consensus 304 ------------~--~~~~~n~deaVa~GAa~~aa 324 (763)
+ +....++..++.+||+++|.
T Consensus 329 ~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilas 363 (394)
T 1k8k_B 329 VLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLAD 363 (394)
T ss_dssp TCSSCCCTTCCCCC---------------------
T ss_pred hcccccCCCCceEEEEecCCCcceeEEhhhHHhhC
Confidence 1 22345678999999999886
No 28
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=99.25 E-value=3.2e-11 Score=107.82 Aligned_cols=83 Identities=23% Similarity=0.350 Sum_probs=76.4
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHccchHHhhccCCHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy740 537 LEKERIDARNCLEEYVYDLRNKLGSEEEFALYIAADDASKLSTQLDETENWLYEEGADVNKSVYISKLDELKAIGEKIRQ 616 (763)
Q Consensus 537 ~~~~~~ea~N~LEs~iy~~R~~L~~~~~~~~~~teeer~~l~~~l~e~~~WL~~~g~~a~~~~~~~kl~eL~~~~~pi~~ 616 (763)
.+|++.++||.||+|||.+|..|.+ +.|...+++++++.|...|.++.+||+.+ .+++.++|+.++.+|+.++.||..
T Consensus 3 ~~re~ieakN~lEs~iy~~e~~l~e-~~~~~kl~~eek~~i~~~i~e~~~wL~~~-~~a~~e~i~~k~~eL~~~~~~i~~ 80 (113)
T 3lof_A 3 AAAERVSAKNALESYAFNMKSAVED-EGLKGKISEADKKKVLDKCQEVISWLDAN-TLAEKDEFEHKRKELEQVCNPIIS 80 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTC-GGGBTTBCHHHHHHHHHHHHHHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc-hhhhccCCHHHHHHHHHHHHHHHHHHHcC-CcCCHHHHHHHHHHHHHHHHHHHH
Confidence 5788999999999999999999985 46899999999999999999999999975 678999999999999999999999
Q ss_pred HHHhh
Q psy740 617 RKVDY 621 (763)
Q Consensus 617 R~~E~ 621 (763)
|+...
T Consensus 81 k~y~~ 85 (113)
T 3lof_A 81 GLYQG 85 (113)
T ss_dssp HHHHC
T ss_pred HHHHh
Confidence 88753
No 29
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=98.99 E-value=2.3e-09 Score=115.70 Aligned_cols=75 Identities=16% Similarity=0.281 Sum_probs=62.6
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCcHH--HHHHHHHhcCCCCCCCCChhHHHHhHHHHHc
Q psy740 246 RSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPA--IKGLIEKIFQKTPSTTLNQDEAVARGCALQC 323 (763)
Q Consensus 246 r~~fe~l~~~l~~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~--v~~~l~~~fg~~~~~~~n~deaVa~GAa~~a 323 (763)
.+.+++.++++++++...|++.+.+ ++.++.|+|+||++.++. +++.|++.|+.. .||..|+|+|+..++
T Consensus 263 ~~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~~~i~~~~~~~----~~p~~anA~G~~~~~ 334 (355)
T 3js6_A 263 KDEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLSHYYSDVFEKA----DDSQFSNVRGYEKLG 334 (355)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHHHHSSSCEECC----SSGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHHHHHHHHCCCC----CCcHHHHHHHHHHHH
Confidence 3457788888888888888888764 466899999999999998 899999988543 899999999999998
Q ss_pred chhcC
Q psy740 324 AMLSP 328 (763)
Q Consensus 324 a~ls~ 328 (763)
..+..
T Consensus 335 ~~~~~ 339 (355)
T 3js6_A 335 ELLKN 339 (355)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 77653
No 30
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=98.98 E-value=7.4e-10 Score=99.91 Aligned_cols=80 Identities=19% Similarity=0.343 Sum_probs=72.3
Q ss_pred HHHHHHHhhhhHHHHHHHHHHccchHHhhccCCHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy740 538 EKERIDARNCLEEYVYDLRNKLGSEEEFALYIAADDASKLSTQLDETENWLYEEGADVNKSVYISKLDELKAIGEKIRQR 617 (763)
Q Consensus 538 ~~~~~ea~N~LEs~iy~~R~~L~~~~~~~~~~teeer~~l~~~l~e~~~WL~~~g~~a~~~~~~~kl~eL~~~~~pi~~R 617 (763)
+|++.++||.||+|||.+|..|.+ +.+...+++++++.|...|.++.+||+.+ .++++++|+.++++|+.++.||..|
T Consensus 13 ~re~iEarN~aEsliy~~e~~L~e-~~~~dkl~~eek~~I~~~i~el~~~L~~~-~~ad~e~ik~k~~eL~~~~~~i~~k 90 (120)
T 2p32_A 13 GLVPRGSHMGLESYAFNLKQTIED-EKLKDKISPEDKKKIEDKCDEILKWLDSN-QTAEKEEFEHQQKDLEGLANPIISK 90 (120)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTC-TTTGGGSCHHHHHHHHHHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc-hhhhccCCHHHHHHHHHHHHHHHHHHHcC-CcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 467889999999999999999974 34788999999999999999999999854 6689999999999999999999988
Q ss_pred HH
Q psy740 618 KV 619 (763)
Q Consensus 618 ~~ 619 (763)
+.
T Consensus 91 ~y 92 (120)
T 2p32_A 91 LY 92 (120)
T ss_dssp HC
T ss_pred HH
Confidence 75
No 31
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=98.85 E-value=2.2e-09 Score=95.93 Aligned_cols=78 Identities=18% Similarity=0.333 Sum_probs=68.4
Q ss_pred HHHHhhhhHHHHHHHHHHccchHHhhccCCHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Q psy740 541 RIDARNCLEEYVYDLRNKLGSEEEFALYIAADDASKLSTQLDETENWLYEEGADVNKSVYISKLDELKAIGEKIRQRKVD 620 (763)
Q Consensus 541 ~~ea~N~LEs~iy~~R~~L~~~~~~~~~~teeer~~l~~~l~e~~~WL~~~g~~a~~~~~~~kl~eL~~~~~pi~~R~~E 620 (763)
+.++||.||+|||.+|..|.+ +.+...+++++|+.|...|.++.+||.++ .+++.++|+.++++|+.++.||..|+.+
T Consensus 2 l~EarN~aE~~iy~~e~~L~~-~e~~~kl~~~ek~~i~~~i~~l~~~L~~~-~~ad~~~i~~~~~~L~~~~~~i~~~~~~ 79 (113)
T 1ud0_A 2 VPRGSHMLESYAFNMKATVED-EKLQGKINDEDKQKILDKCNEIISWLDKN-QTAEKEEFEHQQKELEKVCNPIITKLYQ 79 (113)
T ss_dssp --CCHHHHHHHHHHHHHHHTS-GGGTTTSCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHHhcc-hhhhccCCHHHHHHHHHHHHHHHHHHHcC-CccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 568999999999999999974 46888999999999999999999999743 4567899999999999999999988764
No 32
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=98.58 E-value=9.5e-09 Score=109.89 Aligned_cols=130 Identities=10% Similarity=0.141 Sum_probs=89.1
Q ss_pred HhhhcCCCCCchhHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHhccCCCceeeEEeeccccCcccEEEe
Q psy740 165 IIASAANPYLGGRNIDYKLAKHFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSANSTKLPFGIECFMNDIDVKGEM 244 (763)
Q Consensus 165 vl~~~~d~~lGG~d~D~~l~~~~~~~~~~~~~~~~~~~~~~~~rL~~~aek~K~~LS~~~~~~~~~ie~l~~~~d~~~~i 244 (763)
+...++...+||..+++.|++++.. .+|+..+... .++++|+. . . . ..+.++ ..+
T Consensus 195 ~~~~~~~~~~G~~~~~~~i~~~l~~---~~~g~~i~~~---------~~e~i~~~--g-~--~-------~~g~~~-~~~ 249 (329)
T 4apw_A 195 NPSERFIEEHGVKDLIIRVGDALTD---LNNGNLITNE---------QAESALNN--G-Y--M-------KKGGEI-DTE 249 (329)
T ss_dssp CGGGCEEESCCHHHHHHHHHTSSSS---CSSCSCTTSB---------TTTTCSSS--C-S--S-------CEECTT-CCS
T ss_pred eeccccchhhHHHHHHHHHHHHHHh---hccCCCCCHH---------HHHHHHhc--C-C--c-------ccCCcc-hhH
Confidence 4444456679999999999987765 0344433211 23333332 0 0 1 011122 134
Q ss_pred eHHHHHHHhHHHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcCCCCCCCCChhHHHHhHHHHHcc
Q psy740 245 CRSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQKTPSTTLNQDEAVARGCALQCA 324 (763)
Q Consensus 245 tr~~fe~l~~~l~~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg~~~~~~~n~deaVa~GAa~~aa 324 (763)
..+.+++.++++++++...|++. +..++.++.|+|+||++.+ +.+.|++.|+.++...-||..|+|+|+..++.
T Consensus 250 ~~~~i~~~~~e~~~~I~~~i~~~----~~~~~~~~~IvltGGGA~l--~~~~l~~~~~~~v~v~~~P~~a~a~G~~~~~~ 323 (329)
T 4apw_A 250 SSTVIKKVKEKFLKDAIKLIEKR----GFKLDQLDSLIFIGGTTQK--LKEQISKTYPNNSIITNNSQWTTCEGLYKVAV 323 (329)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHH----TCCTTSCSEEEEESTTHHH--HHHHHHHHSTTCEECCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc----CCCHHHccEEEEECChHHH--HHHHHHHHcCCCCEecCCChhhHHHHHHHHHh
Confidence 57788888888888887777766 3456668999999999998 56999999987777788999999999998775
Q ss_pred h
Q psy740 325 M 325 (763)
Q Consensus 325 ~ 325 (763)
.
T Consensus 324 ~ 324 (329)
T 4apw_A 324 A 324 (329)
T ss_dssp H
T ss_pred h
Confidence 4
No 33
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=98.34 E-value=1e-06 Score=98.44 Aligned_cols=65 Identities=18% Similarity=0.251 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHcCCCC--CCccEEEEecCCCCcHHHHHHHHHhc----C---CCCCCC---CChhHHHHhHHHHHcc
Q psy740 260 VEKTLKDCLEKSKLAL--SDIHSVEIVGGSSRIPAIKGLIEKIF----Q---KTPSTT---LNQDEAVARGCALQCA 324 (763)
Q Consensus 260 i~~~i~~~l~~a~~~~--~~i~~V~lvGGssriP~v~~~l~~~f----g---~~~~~~---~n~deaVa~GAa~~aa 324 (763)
|-+++-+++..+.... .-...|+|+||+|.+|.+.+.|.+.+ + .++... .+...++=+|+++.|.
T Consensus 394 i~e~i~~sI~~cd~d~r~~L~~nIvLsGGst~~pGf~~Rl~~El~~l~p~~~i~v~~~~~~~er~~s~WiGgsilas 470 (498)
T 3qb0_A 394 LADLVYSSIMSSDVDLRATLAHNVVLTGGTSSIPGLSDRLMTELNKILPSLKFRILTTGHTIERQYQSWLGGSILTS 470 (498)
T ss_dssp HHHHHHHHHHTSCTTTHHHHHTTEEEESGGGGSTTHHHHHHHHHHHHSTTSCCCEECCSCTGGGGSHHHHHHHHHHT
T ss_pred chHHHHHHHHhCCHHHHHHHhcCEEEeCCccCchhHHHHHHHHHHHhCCCCeeEEEcCCCCCccCccEEcccEEEec
Confidence 4556666666554321 11368999999999999999998755 2 122223 4567889999999884
No 34
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.27 E-value=1.1e-07 Score=104.97 Aligned_cols=189 Identities=13% Similarity=0.130 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHHHHHhcCC--CCcEEEeecccCCHHHHHHHHHHHh--------------Hh---hhc-----------
Q psy740 120 ITAMLLTKLRETSEIALQCN--ISDCVLSVPSFYTNAERKALLDAAK--------------II---ASA----------- 169 (763)
Q Consensus 120 v~a~~L~~lk~~ae~~~~~~--v~~~VITVPa~f~~~qR~al~~Aa~--------------vl---~~~----------- 169 (763)
....+++|+.. ..++.. -..++||.|+..+...|+.+.+.+- ++ +.+
T Consensus 104 ~~e~iw~~~~~---~~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~~~~~~t 180 (427)
T 3dwl_A 104 HMERFWQQSLF---KYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLT 180 (427)
T ss_dssp HHHHHHHHHHH---TTSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTTCSCCCC
T ss_pred HHHHHHHHHHh---HhhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCcccccCCCce
Confidence 44555555432 223322 2369999999999999999988874 22 211
Q ss_pred --------------------------CCCCCchhHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHhccCC
Q psy740 170 --------------------------ANPYLGGRNIDYKLAKHFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSAN 223 (763)
Q Consensus 170 --------------------------~d~~lGG~d~D~~l~~~~~~~~~~~~~~~~~~~~~~~~rL~~~aek~K~~LS~~ 223 (763)
-...+||+++|..|.+++..++.. ..=...++.+|+.++.-
T Consensus 181 glVVDiG~g~T~v~PV~~G~~l~~~~~rl~~gG~~lt~~L~~lL~~~~~~-------------~~~~~~~~~IKe~~cyv 247 (427)
T 3dwl_A 181 GTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEP-------------DSSLKTAERIKEECCYV 247 (427)
T ss_dssp EEEEEESSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHTTC---------------------CHHHHHHHHHHCCC
T ss_pred EEEEECCCCceEEEEEECCEEehhhheeccccHHHHHHHHHHHHHHcCCC-------------chhHHHHHHHHHhcCcc
Confidence 002589999999999888765431 00124567777777642
Q ss_pred Ccee----------eEEeec--c--ccCcccEEEeeHHHHH---HHhHHH------HHHHHHHHHHHHHHcCCC--CCCc
Q psy740 224 STKL----------PFGIEC--F--MNDIDVKGEMCRSEME---ELCKDV------FENVEKTLKDCLEKSKLA--LSDI 278 (763)
Q Consensus 224 ~~~~----------~~~ie~--l--~~~~d~~~~itr~~fe---~l~~~l------~~~i~~~i~~~l~~a~~~--~~~i 278 (763)
.... +..+.. + -++....++|..+.|. -|++|- ...+.++|.++|.++... ..=.
T Consensus 248 ~~d~~~e~~~~~~~~~~~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~dlr~~L~ 327 (427)
T 3dwl_A 248 CPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDVRKGLY 327 (427)
T ss_dssp CSCHHHHHHHTTC-----CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCHHHHHHHH
T ss_pred cCCHHHHHHHhhcCccccceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCHHHHHHHh
Confidence 1100 000111 1 2333345677888773 333441 234778888888765432 1113
Q ss_pred cEEEEecCCCCcHHHHHHHHHhc----C------------------CCCCCCCChhHHHHhHHHHHcc
Q psy740 279 HSVEIVGGSSRIPAIKGLIEKIF----Q------------------KTPSTTLNQDEAVARGCALQCA 324 (763)
Q Consensus 279 ~~V~lvGGssriP~v~~~l~~~f----g------------------~~~~~~~n~deaVa~GAa~~aa 324 (763)
..|+|+||+|.+|.+.+.|.+.+ . .++..+.++..++=+|++++|.
T Consensus 328 ~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilas 395 (427)
T 3dwl_A 328 KNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQ 395 (427)
T ss_dssp HCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHH
T ss_pred CCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeecc
Confidence 67999999999999999888754 1 1122345667899999999985
No 35
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=97.91 E-value=0.00042 Score=79.99 Aligned_cols=48 Identities=13% Similarity=0.192 Sum_probs=36.6
Q ss_pred ccEEEEecCCCCcHHHHHHHHHhcC-------------CCCC---CCCChhHHHHhHHHHHcch
Q psy740 278 IHSVEIVGGSSRIPAIKGLIEKIFQ-------------KTPS---TTLNQDEAVARGCALQCAM 325 (763)
Q Consensus 278 i~~V~lvGGssriP~v~~~l~~~fg-------------~~~~---~~~n~deaVa~GAa~~aa~ 325 (763)
...|+|+||+|.+|.+.+.|...+. .++. ...++..++=+||+++|..
T Consensus 501 ~~NIvltGG~s~~pGf~~RL~~eL~~~~p~~~~~~~~~v~v~~~p~~~d~~~~aW~GgSilasL 564 (593)
T 4fo0_A 501 YSSILVVGGGLMFHKAQEFLQHRILNKMPPSFRRIIENVDVITRPKDMDPRLIAWKGGAVLACL 564 (593)
T ss_dssp HHEEEEESSTTCCBTHHHHHHHHHHHHSCHHHHHHSSCCEEESSGGGCCTTTHHHHHHHHHHHC
T ss_pred hCCEEEEchhhchhcHHHHHHHHHHHhCcchhccccceEEEECCCCCCCCceeeehhhHHHhcC
Confidence 3689999999999999998877651 1122 2357888999999999853
No 36
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=96.35 E-value=0.0043 Score=63.78 Aligned_cols=48 Identities=21% Similarity=0.178 Sum_probs=43.8
Q ss_pred cEEEEecCCCCcHHHHHHHHHhcCCCCCCCCChhHHHHhHHHHHcchh
Q psy740 279 HSVEIVGGSSRIPAIKGLIEKIFQKTPSTTLNQDEAVARGCALQCAML 326 (763)
Q Consensus 279 ~~V~lvGGssriP~v~~~l~~~fg~~~~~~~n~deaVa~GAa~~aa~l 326 (763)
+.|+++||.++.|.+++.+.+.+|.++..+.+++.+.|+|||+.|+..
T Consensus 210 ~~i~~~GG~a~n~~~~~~~~~~lg~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 210 KDVVMTGGVAQNYGVRGALEEGLGVEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp SSEEEESGGGGCHHHHHHHHHHHCSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred CeEEEeCccccCHHHHHHHHHHHCCCeEeCCCcchHhHHHHHHHHHHh
Confidence 679999999999999999999999988888788889999999998653
No 37
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=96.02 E-value=0.0075 Score=68.75 Aligned_cols=83 Identities=11% Similarity=0.126 Sum_probs=59.3
Q ss_pred eeHHHHHHHhHHHHHHHHHHHHHH---HHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcCCCCCCCCChhHHHHhHHH
Q psy740 244 MCRSEMEELCKDVFENVEKTLKDC---LEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQKTPSTTLNQDEAVARGCA 320 (763)
Q Consensus 244 itr~~fe~l~~~l~~~i~~~i~~~---l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg~~~~~~~n~deaVa~GAa 320 (763)
-||.++-.++.-+++-+.--++.+ |++.+. .++.|.++||++|.+++.+++.++||.++... ...|+.|+|||
T Consensus 409 ~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~---~~~~i~~~GG~aks~~~~Qi~ADv~g~pV~~~-~~~e~~alGAA 484 (554)
T 3l0q_A 409 TTPEDMALRYLATIQALALGTRHIIETMNQNGY---NIDTMMASGGGTKNPIFVQEHANATGCAMLLP-EESEAMLLGSA 484 (554)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC---CCCEEEEESGGGGCHHHHHHHHHHHCCEEEEE-SCSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---CCCEEEEeCccccCHHHHHHHHHhhCCeEEec-CCCcchHHHHH
Confidence 378887433444444433333333 334444 47899999999999999999999999887654 34679999999
Q ss_pred HHcchhcCCc
Q psy740 321 LQCAMLSPAV 330 (763)
Q Consensus 321 ~~aa~ls~~~ 330 (763)
+.|+.-.+.+
T Consensus 485 ~lA~~a~G~~ 494 (554)
T 3l0q_A 485 MMGTVAAGVF 494 (554)
T ss_dssp HHHHHHTTSS
T ss_pred HHHHHHcCCc
Confidence 9998766654
No 38
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=95.88 E-value=0.01 Score=67.28 Aligned_cols=77 Identities=12% Similarity=0.085 Sum_probs=56.5
Q ss_pred HHhHHHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcCCCCCCCCChhHHHHhHHHHHcchhcC
Q psy740 251 ELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQKTPSTTLNQDEAVARGCALQCAMLSP 328 (763)
Q Consensus 251 ~l~~~l~~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg~~~~~~~n~deaVa~GAa~~aa~ls~ 328 (763)
.+++-+++-+.--++.+++..+.....++.|.++||++|.+++.+++.++||.++... ...|+.|+|||+.|+.-.+
T Consensus 408 ~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA~~a~G 484 (538)
T 4bc3_A 408 VEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVFDAPVYVI-DTANSACVGSAYRAFHGLA 484 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHHTSCEEEC-CCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHhCCceEec-CCCCchHHHHHHHHHHHhC
Confidence 3444445544444455555544444457899999999999999999999999987654 4578999999999976443
No 39
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=95.85 E-value=0.011 Score=66.74 Aligned_cols=52 Identities=19% Similarity=0.162 Sum_probs=45.9
Q ss_pred ccEEEEecCCCCcHHHHHHHHHhcCCCC-CCCCChhHHHHhHHHHHcchhcCCc
Q psy740 278 IHSVEIVGGSSRIPAIKGLIEKIFQKTP-STTLNQDEAVARGCALQCAMLSPAV 330 (763)
Q Consensus 278 i~~V~lvGGssriP~v~~~l~~~fg~~~-~~~~n~deaVa~GAa~~aa~ls~~~ 330 (763)
++.|.++||++|.+++.+++.++||.++ .. ..+.|+.|+|||+.|+.-.+.+
T Consensus 403 ~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~~e~~alGaA~lA~~a~G~~ 455 (511)
T 3hz6_A 403 VGLLKVVGGGARSEAWLRMIADNLNVSLLVK-PDAHLHPLRGLAALAAVELEWS 455 (511)
T ss_dssp CCEEEEESGGGGCHHHHHHHHHHHTCEEEEC-CCGGGHHHHHHHHHHHHHTTSC
T ss_pred CCEEEEeCchhcCHHHHHHHHHHHCCeeEEe-cCCCCchHHHHHHHHHHHhCCc
Confidence 7899999999999999999999999988 54 4589999999999998766653
No 40
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.83 E-value=0.0098 Score=67.33 Aligned_cols=82 Identities=12% Similarity=0.138 Sum_probs=59.3
Q ss_pred eHHHHHHH-hHHHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcCCCCCCCCChhHHHHhHHHHHc
Q psy740 245 CRSEMEEL-CKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQKTPSTTLNQDEAVARGCALQC 323 (763)
Q Consensus 245 tr~~fe~l-~~~l~~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg~~~~~~~n~deaVa~GAa~~a 323 (763)
+|.++-.. ++.+.-.+...++..-+.+|.. ++.|.++||++|.+++.+++.++||.++... ...|+.|+|||+.|
T Consensus 372 ~~~~i~RAvlEgia~~~r~~le~l~~~~g~~---~~~i~v~GGgaks~~~~Qi~ADvlg~pV~~~-~~~E~~alGAA~lA 447 (526)
T 3ezw_A 372 NANHIIRATLESIAYQTRDVLEAMQADSGIR---LHALRVDGGAVANNFLMQFQSDILGTRVERP-EVREVTALGAAYLA 447 (526)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---CSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---CCEEEEECchhhCHHHHHHHHHHHCCEEEeC-CCCchHHHHHHHHH
Confidence 55555432 2333334444554444456655 7899999999999999999999999887654 45678999999999
Q ss_pred chhcCCc
Q psy740 324 AMLSPAV 330 (763)
Q Consensus 324 a~ls~~~ 330 (763)
+.-.+.|
T Consensus 448 ~~a~G~~ 454 (526)
T 3ezw_A 448 GLAVGFW 454 (526)
T ss_dssp HHHTTSS
T ss_pred HHHhCCC
Confidence 8777654
No 41
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=95.77 E-value=0.0084 Score=67.18 Aligned_cols=81 Identities=15% Similarity=0.181 Sum_probs=55.6
Q ss_pred eHHHHHH-HhHHHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcCCCCCCCCChhHHHHhHHHHHc
Q psy740 245 CRSEMEE-LCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQKTPSTTLNQDEAVARGCALQC 323 (763)
Q Consensus 245 tr~~fe~-l~~~l~~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg~~~~~~~n~deaVa~GAa~~a 323 (763)
+|.++-. +++.+.-.+...++. |++.+. .++.|.++||++|.+.+.+++.+.||.++......+.+.|+|||+.|
T Consensus 357 ~~~~~~rAvlEgia~~~~~~~~~-l~~~g~---~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~~e~~~alGAA~lA 432 (484)
T 2itm_A 357 GPNELARAVLEGVGYALADGMDV-VHACGI---KPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARLA 432 (484)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH-HHTTTC---CCSCEEEESGGGCCHHHHHHHHHHHCCCEEEESCTTSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHH-HHHcCC---CcceEEEEeccccCHHHHHHHHHHhCCeEEeCCCCCcccHHHHHHHH
Confidence 4555432 223333333333332 233343 46789999999999999999999999988766555546999999999
Q ss_pred chhcCC
Q psy740 324 AMLSPA 329 (763)
Q Consensus 324 a~ls~~ 329 (763)
+.-.+.
T Consensus 433 ~~~~g~ 438 (484)
T 2itm_A 433 QIAANP 438 (484)
T ss_dssp HHHHCT
T ss_pred HHHcCC
Confidence 765554
No 42
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=95.76 E-value=0.0032 Score=69.42 Aligned_cols=77 Identities=27% Similarity=0.331 Sum_probs=54.8
Q ss_pred HHH--HHHHhHHHHHHHHHH--HHHHHHHcCC-----CCCCccEEEEecCCCCcHHHHHHHHHhcCC-CC-------CCC
Q psy740 246 RSE--MEELCKDVFENVEKT--LKDCLEKSKL-----ALSDIHSVEIVGGSSRIPAIKGLIEKIFQK-TP-------STT 308 (763)
Q Consensus 246 r~~--fe~l~~~l~~~i~~~--i~~~l~~a~~-----~~~~i~~V~lvGGssriP~v~~~l~~~fg~-~~-------~~~ 308 (763)
+.. +|+ ++-+-+++.+. +.++|+..+. +..+|..|+|+||+|.+|-+.++..+.|+. .+ ...
T Consensus 511 ~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~~VRiGrP~~~g~ 589 (607)
T 1nbw_A 511 DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHYGVVAGQGNIRGT 589 (607)
T ss_dssp CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTTTCEEEECCGGGT
T ss_pred CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCeEEecCCcccc
Confidence 444 555 44444443332 4555777654 246779999999999999999999999965 32 124
Q ss_pred CChhHHHHhHHHHHc
Q psy740 309 LNQDEAVARGCALQC 323 (763)
Q Consensus 309 ~n~deaVa~GAa~~a 323 (763)
-.|..|+|.|.+++.
T Consensus 590 ~gP~fAtAvGLlly~ 604 (607)
T 1nbw_A 590 EGPRNAVATGLLLAG 604 (607)
T ss_dssp SCSCCHHHHHHHHHH
T ss_pred CCchHHHHHHHHHhh
Confidence 589999999999764
No 43
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=95.74 E-value=0.0029 Score=69.50 Aligned_cols=80 Identities=20% Similarity=0.290 Sum_probs=55.6
Q ss_pred EeeHHH--HHHHhHHHHHHHHHH--HHHHHHHcCC-----CCCCccEEEEecCCCCcHHHHHHHHHhcCC-CC-------
Q psy740 243 EMCRSE--MEELCKDVFENVEKT--LKDCLEKSKL-----ALSDIHSVEIVGGSSRIPAIKGLIEKIFQK-TP------- 305 (763)
Q Consensus 243 ~itr~~--fe~l~~~l~~~i~~~--i~~~l~~a~~-----~~~~i~~V~lvGGssriP~v~~~l~~~fg~-~~------- 305 (763)
.| +.. +|+ ++-+-+++.+. +.++|+..+. +..+|..|+|+||+|.+|-+.++..+.|+. .+
T Consensus 507 ~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~y~VRiGrP~~ 584 (610)
T 2d0o_A 507 PL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHYRLVAGRGNI 584 (610)
T ss_dssp EC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTTSSCEEEECCG
T ss_pred ee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCeEEecCCc
Confidence 44 455 565 44444443333 3334554322 356789999999999999999999999976 42
Q ss_pred CCCCChhHHHHhHHHHHcc
Q psy740 306 STTLNQDEAVARGCALQCA 324 (763)
Q Consensus 306 ~~~~n~deaVa~GAa~~aa 324 (763)
...-.|..|+|.|.+++.+
T Consensus 585 ~gv~gP~fAtAvGLlly~~ 603 (610)
T 2d0o_A 585 RGSEGPRNAVATGLILSWH 603 (610)
T ss_dssp GGTSTTSCHHHHHHHHHHH
T ss_pred cccCCCcHHHHHHHHHHHh
Confidence 1245899999999998764
No 44
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=95.73 E-value=0.013 Score=65.96 Aligned_cols=80 Identities=14% Similarity=0.250 Sum_probs=55.9
Q ss_pred eHHHHHHHhHHHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcCCCCCCCCChhHHHHhHHHHHcc
Q psy740 245 CRSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQKTPSTTLNQDEAVARGCALQCA 324 (763)
Q Consensus 245 tr~~fe~l~~~l~~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg~~~~~~~n~deaVa~GAa~~aa 324 (763)
+|.++- +-+++.+.--++.+++...-.. .++.|.++||+++.+++.+++.+.||.++.... ..|+.|+|||+.|+
T Consensus 365 ~~~~l~---rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~-~~e~~alGaA~lA~ 439 (497)
T 2zf5_O 365 GREHLA---RATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADILNRKVIRPV-VKETTALGAAYLAG 439 (497)
T ss_dssp CHHHHH---HHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHHTSCEEEES-CSCHHHHHHHHHHH
T ss_pred CHHHHH---HHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhcCCeEEEcC-CCcchHHHHHHHHH
Confidence 455443 3344444444444444332222 578999999999999999999999998876543 45699999999998
Q ss_pred hhcCC
Q psy740 325 MLSPA 329 (763)
Q Consensus 325 ~ls~~ 329 (763)
.-.+.
T Consensus 440 ~~~g~ 444 (497)
T 2zf5_O 440 LAVDY 444 (497)
T ss_dssp HHTTS
T ss_pred HHhCc
Confidence 76554
No 45
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=95.72 E-value=0.014 Score=65.69 Aligned_cols=80 Identities=21% Similarity=0.321 Sum_probs=56.3
Q ss_pred eHHHHHH-HhHHHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcCCCCCCCCChhHHHHhHHHHHc
Q psy740 245 CRSEMEE-LCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQKTPSTTLNQDEAVARGCALQC 323 (763)
Q Consensus 245 tr~~fe~-l~~~l~~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg~~~~~~~n~deaVa~GAa~~a 323 (763)
+|.++-. +++.+.-.+...++ .|++.+.. ++.|.++||++|.|++.+++.++||.++... ...|+.|+|||+.|
T Consensus 395 ~~~~l~RAvlEgia~~~r~~l~-~l~~~g~~---~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~-~~~e~~alGAA~lA 469 (515)
T 3i8b_A 395 TRENLARAFVEGLLCSQRDCLE-LIRSLGAS---ITRILLIGGGAKSEAIRTLAPSILGMDVTRP-ATDEYVAIGAARQA 469 (515)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH-HHHHTTCC---CCEEEEESGGGGCHHHHHHHHHHHTSCEEEE-CCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHHcCCC---CCEEEEECchhcCHHHHHHHHHHhCCceEec-CCcccHHHHHHHHH
Confidence 5655543 22333334444443 33445543 7899999999999999999999999887654 45679999999999
Q ss_pred chhcCC
Q psy740 324 AMLSPA 329 (763)
Q Consensus 324 a~ls~~ 329 (763)
+.-.+.
T Consensus 470 ~~a~G~ 475 (515)
T 3i8b_A 470 AWVLSG 475 (515)
T ss_dssp HHHHHC
T ss_pred HHHcCC
Confidence 865543
No 46
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=95.69 E-value=0.012 Score=66.29 Aligned_cols=81 Identities=14% Similarity=0.120 Sum_probs=56.4
Q ss_pred eHHHHHHH-hHHHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcCCCCCCCCChhHHHHhHHHHHc
Q psy740 245 CRSEMEEL-CKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQKTPSTTLNQDEAVARGCALQC 323 (763)
Q Consensus 245 tr~~fe~l-~~~l~~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg~~~~~~~n~deaVa~GAa~~a 323 (763)
||.+|-.. ++.+.-.+...++ .|++.+. .++.|.++||++|.+++.+++.++||.++... ...|+.|+|||+.|
T Consensus 364 ~~~~l~RAvlEgia~~~r~~~~-~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA 438 (504)
T 3ll3_A 364 QKPEMARAVIEGIIFNLYDAAS-NLIKNTK---KPVAINATGGFLKSDFVRQLCANIFNVPIVTM-KEQQSGTLAAMFLA 438 (504)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-HHHTTSC---CCSEEEEESGGGCSHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHHcCC---CCCEEEEeCchhcCHHHHHHHHHhhCCeEEec-CCCCchhHHHHHHH
Confidence 56555332 2333333333333 2344443 47899999999999999999999999987654 45679999999999
Q ss_pred chhcCCc
Q psy740 324 AMLSPAV 330 (763)
Q Consensus 324 a~ls~~~ 330 (763)
+.-.+.+
T Consensus 439 ~~a~G~~ 445 (504)
T 3ll3_A 439 RQALGLN 445 (504)
T ss_dssp HHHTTSC
T ss_pred HHHcCcc
Confidence 8766543
No 47
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=95.47 E-value=0.018 Score=64.78 Aligned_cols=81 Identities=16% Similarity=0.122 Sum_probs=56.8
Q ss_pred eHHHHHHH-hHHHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcCCCCCCCCChhHHHHhHHHHHc
Q psy740 245 CRSEMEEL-CKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQKTPSTTLNQDEAVARGCALQC 323 (763)
Q Consensus 245 tr~~fe~l-~~~l~~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg~~~~~~~n~deaVa~GAa~~a 323 (763)
+|.+|-.. ++.+.-.+...++ .|++.+.. ++.|.++||++|.+++.+++.++||.++..... .|+.|+|||+.|
T Consensus 371 ~~~~l~rAvlEgia~~~~~~~~-~l~~~g~~---~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~-~e~~alGaA~lA 445 (508)
T 3ifr_A 371 TRGHLWRALLEAVALAFRHHVA-VLDDIGHA---PQRFFASDGGTRSRVWMGIMADVLQRPVQLLAN-PLGSAVGAAWVA 445 (508)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-HHHHHTCC---CCEEEEESGGGGCHHHHHHHHHHHTSCEEEEEC-CSTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHhcCCC---CCEEEEeCCcccCHHHHHHHHHHhCCeEEecCC-CCchHHHHHHHH
Confidence 56655332 2333334444443 33444543 788999999999999999999999998765543 568999999999
Q ss_pred chhcCCc
Q psy740 324 AMLSPAV 330 (763)
Q Consensus 324 a~ls~~~ 330 (763)
+.-.+.+
T Consensus 446 ~~a~G~~ 452 (508)
T 3ifr_A 446 AIGGGDD 452 (508)
T ss_dssp HHHTCSS
T ss_pred HHHhCCC
Confidence 8766543
No 48
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=95.39 E-value=0.018 Score=64.82 Aligned_cols=82 Identities=12% Similarity=0.163 Sum_probs=58.6
Q ss_pred eHHHHHH-HhHHHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcCCCCCCCCChhHHHHhHHHHHc
Q psy740 245 CRSEMEE-LCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQKTPSTTLNQDEAVARGCALQC 323 (763)
Q Consensus 245 tr~~fe~-l~~~l~~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg~~~~~~~n~deaVa~GAa~~a 323 (763)
+|.+|-. +++.+.-.+...++.+-+..+.. ++.|.++||++|.+++.+++.++||.++... .+.|+.|+|||+.|
T Consensus 374 ~~~~l~RAvlEgia~~~~~~~~~l~~~~g~~---~~~i~~~GG~aks~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~la 449 (501)
T 3g25_A 374 EKEHFIRATLESLCYQTRDVMEAMSKDSGID---VQSLRVDGGAVKNNFIMQFQADIVNTSVERP-EIQETTALGAAFLA 449 (501)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHSSCC---CSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---CcEEEEecchhcCHHHHHHHHHHhCCceEec-CCCcchHHHHHHHH
Confidence 5655543 23344444444444433335554 7899999999999999999999999887543 46679999999999
Q ss_pred chhcCCc
Q psy740 324 AMLSPAV 330 (763)
Q Consensus 324 a~ls~~~ 330 (763)
+.-.+.+
T Consensus 450 ~~a~G~~ 456 (501)
T 3g25_A 450 GLAVGFW 456 (501)
T ss_dssp HHHTTSS
T ss_pred HHHhCcc
Confidence 8766654
No 49
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=95.37 E-value=0.019 Score=64.62 Aligned_cols=82 Identities=12% Similarity=0.144 Sum_probs=58.3
Q ss_pred eHHHHHHH-hHHHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcCCCCCCCCChhHHHHhHHHHHc
Q psy740 245 CRSEMEEL-CKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQKTPSTTLNQDEAVARGCALQC 323 (763)
Q Consensus 245 tr~~fe~l-~~~l~~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg~~~~~~~n~deaVa~GAa~~a 323 (763)
+|.+|-.. ++.+.-.+...++.+-+..+.. ++.|.++||++|.+++.+++.++||.++... .+.|+.|+|||+.|
T Consensus 373 ~~~~l~RAvlEgia~~~r~~~~~l~~~~g~~---~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA 448 (506)
T 3h3n_X 373 TKEDFVRATLQAVAYQSKDVIDTMKKDSGID---IPLLKVDGGAAKNDLLMQFQADILDIDVQRA-ANLETTALGAAYLA 448 (506)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCSC---CCEEEEESGGGGCHHHHHHHHHHHTSEEEEC-SSSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---CCEEEEecccccCHHHHHHHHHHhCCeEEec-CCCcchhHHHHHHH
Confidence 56655432 2334444444444433334543 7899999999999999999999999887653 46779999999999
Q ss_pred chhcCCc
Q psy740 324 AMLSPAV 330 (763)
Q Consensus 324 a~ls~~~ 330 (763)
+.-.+.+
T Consensus 449 ~~a~G~~ 455 (506)
T 3h3n_X 449 GLAVGFW 455 (506)
T ss_dssp HHHTTSS
T ss_pred HHHhCcc
Confidence 8766654
No 50
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=95.15 E-value=0.025 Score=63.67 Aligned_cols=81 Identities=10% Similarity=0.076 Sum_probs=58.5
Q ss_pred eHHHHHH-HhHHHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcCCCCCCCCChhHHHHhHHHHHc
Q psy740 245 CRSEMEE-LCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQKTPSTTLNQDEAVARGCALQC 323 (763)
Q Consensus 245 tr~~fe~-l~~~l~~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg~~~~~~~n~deaVa~GAa~~a 323 (763)
+|.++-. +++.+.-.+...++.+-+..+.. ++.|.++||++|.+++.+++.++||.++... ...|+.|+|||+.|
T Consensus 373 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~---~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~lA 448 (504)
T 2d4w_A 373 NRNHIARAALEATAFQSREVVDAMNADSGVD---LTELRVDGGMVANELLMQFQADQLGVDVVRP-KVAETTALGAAYAA 448 (504)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC---CCEEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---cceEEEeCCcccCHHHHHHHHHHhCCeEEeC-CCCcchHHHHHHHH
Confidence 5665543 33444445555555443344544 6789999999999999999999999887654 44679999999999
Q ss_pred chhcCC
Q psy740 324 AMLSPA 329 (763)
Q Consensus 324 a~ls~~ 329 (763)
+.-.+.
T Consensus 449 ~~~~G~ 454 (504)
T 2d4w_A 449 GIAVGF 454 (504)
T ss_dssp HHHHTS
T ss_pred HhhcCc
Confidence 876554
No 51
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=95.07 E-value=0.018 Score=65.90 Aligned_cols=79 Identities=9% Similarity=0.151 Sum_probs=55.5
Q ss_pred eHHHHHHHh-HHHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCC-CcHHHHHHHHHhcCCCCCCCCChhHHHHhHHHHH
Q psy740 245 CRSEMEELC-KDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSS-RIPAIKGLIEKIFQKTPSTTLNQDEAVARGCALQ 322 (763)
Q Consensus 245 tr~~fe~l~-~~l~~~i~~~i~~~l~~a~~~~~~i~~V~lvGGss-riP~v~~~l~~~fg~~~~~~~n~deaVa~GAa~~ 322 (763)
+|.+|-..+ +.+.-.+...++ .|++.+. .++.|.++||++ |.+++.+++.++||.++... .+.|+.|+|||+.
T Consensus 410 t~~~l~RAvlEgia~~~r~~~~-~l~~~g~---~~~~i~~~GGga~ks~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~l 484 (572)
T 3jvp_A 410 KPEEIYRALLEATAFGTRAIVD-AFHGRGV---EVHELYACGGLPQKNHLLMQIFADVTNREIKVA-ASKQTPALGAAMF 484 (572)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-HHHTTTC---CEEEEEEESSHHHHCHHHHHHHHHHHTSCEEEB-CCSSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHHcCC---CcCEEEEEcCchhhCHHHHHHHHHHHCCeeEec-CCCccHHHHHHHH
Confidence 566553322 233333333333 3334444 478999999999 99999999999999987644 3578999999999
Q ss_pred cchhcC
Q psy740 323 CAMLSP 328 (763)
Q Consensus 323 aa~ls~ 328 (763)
|+.-.+
T Consensus 485 A~~a~G 490 (572)
T 3jvp_A 485 ASVAAG 490 (572)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 986554
No 52
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=95.03 E-value=0.021 Score=64.04 Aligned_cols=80 Identities=14% Similarity=0.162 Sum_probs=55.8
Q ss_pred eHHHHHH-HhHHHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcCCCCCCCCChhHHHHhHHHHHc
Q psy740 245 CRSEMEE-LCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQKTPSTTLNQDEAVARGCALQC 323 (763)
Q Consensus 245 tr~~fe~-l~~~l~~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg~~~~~~~n~deaVa~GAa~~a 323 (763)
+|.++-. +++.+.-++...++.+-+..+. .++.|.++||.+|.+++.+++.+.||.++... ...|+.|+|||+.|
T Consensus 368 ~~~~~~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~n~~~~q~~Adv~g~pV~~~-~~~e~~alGaA~la 443 (495)
T 2dpn_A 368 SRAHLARAALEGVAFQVRDVVLAMEEEAGV---RLKVLKADGGMAQNRLFLKIQADLLGVPVAVP-EVTETTALGAALMA 443 (495)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTTTSC---CCCCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEecccccCHHHHHHHHHHhCCeeEec-CCcccHHHHHHHHH
Confidence 5555432 3344444444444443222343 36789999999999999999999999887654 44569999999999
Q ss_pred chhcC
Q psy740 324 AMLSP 328 (763)
Q Consensus 324 a~ls~ 328 (763)
+.-.+
T Consensus 444 ~~a~G 448 (495)
T 2dpn_A 444 GVGAG 448 (495)
T ss_dssp HHHHT
T ss_pred HhhcC
Confidence 76554
No 53
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.02 E-value=0.023 Score=64.06 Aligned_cols=82 Identities=12% Similarity=0.137 Sum_probs=57.5
Q ss_pred eHHHHHH-HhHHHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcCCCCCCCCChhHHHHhHHHHHc
Q psy740 245 CRSEMEE-LCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQKTPSTTLNQDEAVARGCALQC 323 (763)
Q Consensus 245 tr~~fe~-l~~~l~~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg~~~~~~~n~deaVa~GAa~~a 323 (763)
+|.++-. +++.+.-.+...++.+-+..+.. ++.|.++||++|.+++.+++.++||.++... .+.|+.|+|||+.|
T Consensus 371 ~~~~l~RAvlEgia~~~r~~~~~l~~~~g~~---~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA 446 (510)
T 2p3r_A 371 NANHIIRATLESIAYQTRDVLEAMQADSGIR---LHALRVDGGAVANNFLMQFQSDILGTRVERP-EVREVTALGAAYLA 446 (510)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---CSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---ccEEEEeCchhcCHHHHHHHHHHhCCceEec-CCCCcHHHHHHHHH
Confidence 5655543 22334444444444433333544 7889999999999999999999999887654 35679999999999
Q ss_pred chhcCCc
Q psy740 324 AMLSPAV 330 (763)
Q Consensus 324 a~ls~~~ 330 (763)
+.-.+.+
T Consensus 447 ~~a~G~~ 453 (510)
T 2p3r_A 447 GLAVGFW 453 (510)
T ss_dssp HHHHTSS
T ss_pred HHHhCcc
Confidence 8765543
No 54
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=94.92 E-value=0.013 Score=66.13 Aligned_cols=53 Identities=11% Similarity=0.023 Sum_probs=44.4
Q ss_pred CccEEEEecCCCCcHHHHHHHHHhcCCCCCCCCChhHHHHhHHHHHcchhcCCc
Q psy740 277 DIHSVEIVGGSSRIPAIKGLIEKIFQKTPSTTLNQDEAVARGCALQCAMLSPAV 330 (763)
Q Consensus 277 ~i~~V~lvGGssriP~v~~~l~~~fg~~~~~~~n~deaVa~GAa~~aa~ls~~~ 330 (763)
.++.|.++||++|.|++.+++.++||.++... ...|+.|+|||+.|+.-.+.+
T Consensus 425 ~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~-~~~e~~alGAA~lA~~a~G~~ 477 (520)
T 4e1j_A 425 NDTVLRVDGGMVASDWTMQRLSDLLDAPVDRP-VILETTALGVAWLAGSRAGVW 477 (520)
T ss_dssp --CCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCCCHHHHHHHHHHHHHHTSS
T ss_pred CcceEEEeCccccCHHHHHHHHHHhCCeEEec-CCCccHHHHHHHHHHHHcCCc
Confidence 47889999999999999999999999987654 456799999999998766654
No 55
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=94.89 E-value=0.034 Score=62.53 Aligned_cols=81 Identities=12% Similarity=0.181 Sum_probs=57.5
Q ss_pred eHHHHHH-HhHHHHHHHHHHHHHHHHHcCCCCCCc-cEEEEecCCCCcHHHHHHHHHhcCCCCCCCCChhHHHHhHHHHH
Q psy740 245 CRSEMEE-LCKDVFENVEKTLKDCLEKSKLALSDI-HSVEIVGGSSRIPAIKGLIEKIFQKTPSTTLNQDEAVARGCALQ 322 (763)
Q Consensus 245 tr~~fe~-l~~~l~~~i~~~i~~~l~~a~~~~~~i-~~V~lvGGssriP~v~~~l~~~fg~~~~~~~n~deaVa~GAa~~ 322 (763)
+|.++-. +++.+.-.+...++.+-+..+.. + +.|.++||.+|.+.+.+++.+.||.++... ...|+.|+|||+.
T Consensus 376 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~---~~~~i~~~GG~a~s~~~~Q~~Adv~g~pV~~~-~~~e~~alGaA~l 451 (503)
T 2w40_A 376 ERSHIVRALLEGIAFQLNEIVDSLTSDMGIE---MLHVLRCDGGMTKNKPFMQFNSDIINTKIEVS-KYKEVTSLGAAVL 451 (503)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS---CCSCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---ccceEEEeCccccCHHHHHHHHHHHCCeEEec-CCCcchHHHHHHH
Confidence 4555543 33444445555554443334543 5 779999999999999999999999887654 4556999999999
Q ss_pred cchhcCC
Q psy740 323 CAMLSPA 329 (763)
Q Consensus 323 aa~ls~~ 329 (763)
|+.-.+.
T Consensus 452 a~~~~G~ 458 (503)
T 2w40_A 452 AGLEVKI 458 (503)
T ss_dssp HHHHTTC
T ss_pred HHHHhCc
Confidence 9876554
No 56
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=94.68 E-value=0.053 Score=47.56 Aligned_cols=78 Identities=14% Similarity=0.224 Sum_probs=58.3
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhhcCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCcchHHHHH
Q psy740 621 YEEKTKAFENIFCSIQIAQKKISMFKEGDERLNHLDAAEITVVEEKVANALKWAENAQSLMNEFTDRTKDAPVPTSEIKN 700 (763)
Q Consensus 621 ~~~rp~a~~~l~~~l~~~~~~l~~~~~~~~~~~~~t~~e~~~l~~~~~e~~~Wl~~~~~~q~~~~~~~~dP~~~~~di~~ 700 (763)
...|-.+...|...+..+++.|.. +.-...++.+++..|.+.|+++..||+.. +. ....+|..
T Consensus 4 ~re~ieakN~lEs~iy~~e~~l~e----~~~~~kl~~eek~~i~~~i~e~~~wL~~~---~~----------a~~e~i~~ 66 (113)
T 3lof_A 4 AAERVSAKNALESYAFNMKSAVED----EGLKGKISEADKKKVLDKCQEVISWLDAN---TL----------AEKDEFEH 66 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTC----GGGBTTBCHHHHHHHHHHHHHHHHHHHHC---TT----------CCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc----hhhhccCCHHHHHHHHHHHHHHHHHHHcC---Cc----------CCHHHHHH
Confidence 344555667777777777776643 11124689999999999999999999872 11 13579999
Q ss_pred HHHHHHHhhhhhhcC
Q psy740 701 EMQNLNNAVNPVFSK 715 (763)
Q Consensus 701 k~~~l~~~~~~l~~k 715 (763)
+++.|+..+.+|+.+
T Consensus 67 k~~eL~~~~~~i~~k 81 (113)
T 3lof_A 67 KRKELEQVCNPIISG 81 (113)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999865
No 57
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=94.34 E-value=0.05 Score=60.86 Aligned_cols=77 Identities=13% Similarity=0.056 Sum_probs=52.5
Q ss_pred EeeHHHHHH-HhHHHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcCCCCCCCCChhHHHHhHHHH
Q psy740 243 EMCRSEMEE-LCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQKTPSTTLNQDEAVARGCAL 321 (763)
Q Consensus 243 ~itr~~fe~-l~~~l~~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg~~~~~~~n~deaVa~GAa~ 321 (763)
.-||.+|-+ +++.+.-.+...++.+-+..|.. ++.|.++||++|.+++.+++.++||.++.... .|+.|+|||+
T Consensus 361 ~~t~~~l~RAvlEgia~~~r~~~~~l~~~~g~~---~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~--~e~~alGaa~ 435 (489)
T 2uyt_A 361 PESDAELARCIFDSLALLYADVLHELAQLRGED---FSQLHIVGGGCQNTLLNQLCADACGIRVIAGP--VEASTLGNIG 435 (489)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC---CSEEEEESGGGGCHHHHHHHHHHHTSEEEECC--TTHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC---CCEEEEeCChhhhHHHHHHHHHHHCCeeecCC--ccHhHHHHHH
Confidence 345666543 23344444444444432324543 67899999999999999999999999876443 5899999955
Q ss_pred Hcc
Q psy740 322 QCA 324 (763)
Q Consensus 322 ~aa 324 (763)
.|+
T Consensus 436 ~A~ 438 (489)
T 2uyt_A 436 IQL 438 (489)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 58
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=93.57 E-value=0.12 Score=53.04 Aligned_cols=75 Identities=15% Similarity=0.030 Sum_probs=52.7
Q ss_pred eeHHHHHH-HhHHHHHHHHHHHHHHHHHcCCCCCCccEEEEecC-CCCcHHHHHHHHHhc---CCCCCCCCChhHHHHhH
Q psy740 244 MCRSEMEE-LCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGG-SSRIPAIKGLIEKIF---QKTPSTTLNQDEAVARG 318 (763)
Q Consensus 244 itr~~fe~-l~~~l~~~i~~~i~~~l~~a~~~~~~i~~V~lvGG-ssriP~v~~~l~~~f---g~~~~~~~n~deaVa~G 318 (763)
.+++++-. ++.-+.+++..+...+.+..+ +..|+++|| .+..|.+++.|.+++ +.++..+-++..+.|+|
T Consensus 207 ~~~eDIaasl~~sV~~~I~~la~~~a~~~~-----i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlG 281 (287)
T 2ews_A 207 FTPSNKLAAVIGVVGEVVTTMAITVAREFK-----TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIG 281 (287)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHH
Confidence 35555432 333344444444444344443 457999999 899999999999984 56777888999999999
Q ss_pred HHHHc
Q psy740 319 CALQC 323 (763)
Q Consensus 319 Aa~~a 323 (763)
||++|
T Consensus 282 AaL~~ 286 (287)
T 2ews_A 282 ALYLE 286 (287)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 99975
No 59
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=90.79 E-value=0.44 Score=42.06 Aligned_cols=77 Identities=16% Similarity=0.277 Sum_probs=56.5
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhcCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCcchHHHHHH
Q psy740 622 EEKTKAFENIFCSIQIAQKKISMFKEGDERLNHLDAAEITVVEEKVANALKWAENAQSLMNEFTDRTKDAPVPTSEIKNE 701 (763)
Q Consensus 622 ~~rp~a~~~l~~~l~~~~~~l~~~~~~~~~~~~~t~~e~~~l~~~~~e~~~Wl~~~~~~q~~~~~~~~dP~~~~~di~~k 701 (763)
..+-++...+...|..+++.|.. +..-..++.+++..|...|+++..||+.. +.. ...+|..+
T Consensus 14 re~iEarN~aEsliy~~e~~L~e----~~~~dkl~~eek~~I~~~i~el~~~L~~~---~~a----------d~e~ik~k 76 (120)
T 2p32_A 14 LVPRGSHMGLESYAFNLKQTIED----EKLKDKISPEDKKKIEDKCDEILKWLDSN---QTA----------EKEEFEHQ 76 (120)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTC----TTTGGGSCHHHHHHHHHHHHHHHHHHHHH---TTC----------CHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc----hhhhccCCHHHHHHHHHHHHHHHHHHHcC---CcC----------CHHHHHHH
Confidence 34555667777788877776643 00113589999999999999999999742 211 13589999
Q ss_pred HHHHHHhhhhhhcC
Q psy740 702 MQNLNNAVNPVFSK 715 (763)
Q Consensus 702 ~~~l~~~~~~l~~k 715 (763)
++.|+..+.+|..+
T Consensus 77 ~~eL~~~~~~i~~k 90 (120)
T 2p32_A 77 QKDLEGLANPIISK 90 (120)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999864
No 60
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=90.64 E-value=0.16 Score=56.48 Aligned_cols=71 Identities=7% Similarity=-0.066 Sum_probs=50.7
Q ss_pred HHhHHHHHH--HHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHh-cCCCCCCCCChhHHHHhHHHHHcchh
Q psy740 251 ELCKDVFEN--VEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKI-FQKTPSTTLNQDEAVARGCALQCAML 326 (763)
Q Consensus 251 ~l~~~l~~~--i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~-fg~~~~~~~n~deaVa~GAa~~aa~l 326 (763)
.+..-+++- +.--++.+++... ..+.|.++||++|.|++.+++.++ ||.++.... ..|+.|+|||+.|+.-
T Consensus 363 ~l~RA~lE~~Gia~~~r~~l~~~~----~~~~i~~~GG~a~s~~w~Qi~ADv~~g~pV~~~~-~~e~~alGAA~lA~~a 436 (482)
T 3h6e_A 363 WFERRAAACLYAALVADTALDLIG----STGRILVEGRFAEADVFVRALASLRPDCAVYTAN-AHNDVSFGALRLIDPG 436 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT----CCSEEEEESGGGGCHHHHHHHHHHSTTSEEEEES-SCCCTTGGGHHHHCTT
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhc----CCCeEEEeCCcccCHHHHHHHhhhcCCCeEEEcC-CCchHHHHHHHHhCcc
Confidence 344444442 3333445555432 127899999999999999999999 999876554 4568999999999754
No 61
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=89.71 E-value=0.78 Score=39.89 Aligned_cols=70 Identities=11% Similarity=0.293 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHHHHHhhcCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHh
Q psy740 629 ENIFCSIQIAQKKISMFKEGDERLNHLDAAEITVVEEKVANALKWAENAQSLMNEFTDRTKDAPVPTSEIKNEMQNLNNA 708 (763)
Q Consensus 629 ~~l~~~l~~~~~~l~~~~~~~~~~~~~t~~e~~~l~~~~~e~~~Wl~~~~~~q~~~~~~~~dP~~~~~di~~k~~~l~~~ 708 (763)
..+...|..+++.|.. .+.-..++.+++..|...|+++..||+..... .. .+|..+++.|+..
T Consensus 7 N~aE~~iy~~e~~L~~----~e~~~kl~~~ek~~i~~~i~~l~~~L~~~~~a-d~------------~~i~~~~~~L~~~ 69 (113)
T 1ud0_A 7 HMLESYAFNMKATVED----EKLQGKINDEDKQKILDKCNEIISWLDKNQTA-EK------------EEFEHQQKELEKV 69 (113)
T ss_dssp HHHHHHHHHHHHHHTS----GGGTTTSCHHHHHHHHHHHHHHHHHHHHHHHH-HH------------HHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHhcc----hhhhccCCHHHHHHHHHHHHHHHHHHHcCCcc-CH------------HHHHHHHHHHHHH
Confidence 4556666667766531 01124689999999999999999999753211 22 4899999999999
Q ss_pred hhhhhcC
Q psy740 709 VNPVFSK 715 (763)
Q Consensus 709 ~~~l~~k 715 (763)
+.+|..+
T Consensus 70 ~~~i~~~ 76 (113)
T 1ud0_A 70 CNPIITK 76 (113)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999864
No 62
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=89.64 E-value=2.8 Score=41.14 Aligned_cols=68 Identities=13% Similarity=0.151 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHH
Q psy740 626 KAFENIFCSIQIAQKKISMFKEGDERLNHLDAAEITVVEEKVANALKWAENAQSLMNEFTDRTKDAPVPTSEIKNEMQNL 705 (763)
Q Consensus 626 ~a~~~l~~~l~~~~~~l~~~~~~~~~~~~~t~~e~~~l~~~~~e~~~Wl~~~~~~q~~~~~~~~dP~~~~~di~~k~~~l 705 (763)
++...+...+..++..|..+. ..++.++++.+.+.|+++..||+.. . ..+|..+++.|
T Consensus 146 e~kn~le~~i~~~~~~l~~~~------~~l~~~~k~~i~~~l~~~~~~L~~~----~------------~~~i~~~~~~L 203 (219)
T 4e81_A 146 QTRNQGDHLLHSTRKQVEEAG------DKLPADDKTAIESALTALETALKGE----D------------KAAIEAKMQEL 203 (219)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG------GGSCHHHHHHHHHHHHHHHHHHHSS----C------------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhh------hhCCHHHHHHHHHHHHHHHHHHhcC----C------------HHHHHHHHHHH
Confidence 333555666666677665532 2478999999999999999999763 2 36899999999
Q ss_pred HHhhhhhhcC
Q psy740 706 NNAVNPVFSK 715 (763)
Q Consensus 706 ~~~~~~l~~k 715 (763)
+..++++..+
T Consensus 204 ~~~~~~i~~~ 213 (219)
T 4e81_A 204 AQVSQKLMEI 213 (219)
T ss_dssp HHHTHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998753
No 63
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=88.47 E-value=0.43 Score=50.47 Aligned_cols=46 Identities=17% Similarity=0.035 Sum_probs=39.5
Q ss_pred ccEEEEecC-CCCcHHHHHHHHHhcC------CCCCCCCChhHHHHhHHHHHc
Q psy740 278 IHSVEIVGG-SSRIPAIKGLIEKIFQ------KTPSTTLNQDEAVARGCALQC 323 (763)
Q Consensus 278 i~~V~lvGG-ssriP~v~~~l~~~fg------~~~~~~~n~deaVa~GAa~~a 323 (763)
++.|+++|| .++.|.+++.|...++ .++....++.-+-|+|||+.+
T Consensus 306 i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 306 IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHHHHHHH
T ss_pred CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHHHHHHh
Confidence 446999999 9999999999999863 456667799999999999975
No 64
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=86.69 E-value=3.6 Score=40.56 Aligned_cols=69 Identities=13% Similarity=0.176 Sum_probs=51.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCcchHHHHHHHHH
Q psy740 625 TKAFENIFCSIQIAQKKISMFKEGDERLNHLDAAEITVVEEKVANALKWAENAQSLMNEFTDRTKDAPVPTSEIKNEMQN 704 (763)
Q Consensus 625 p~a~~~l~~~l~~~~~~l~~~~~~~~~~~~~t~~e~~~l~~~~~e~~~Wl~~~~~~q~~~~~~~~dP~~~~~di~~k~~~ 704 (763)
-.+...+...+..++..|..+. ..++.++++.+.+.|++++.||+.. . ..++..+++.
T Consensus 142 ~e~kn~le~~i~~~~~~l~~~~------~~~~~~~k~~i~~~l~~~~~wl~~~----d------------~~~~~~~~~~ 199 (227)
T 1u00_A 142 AEQKVEAARVLESLHGALAADA------ALLSAAERQVIDDAAAHLSEVAQGD----D------------VDAIEQAIKN 199 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG------GGSCHHHHHHHHHHHHHHHHHTTSS----C------------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhh------ccCCHHHHHHHHHHHHHHHHHHhcC----C------------HHHHHHHHHH
Confidence 3444556666667777665532 2479999999999999999999721 1 3689999999
Q ss_pred HHHhhhhhhcC
Q psy740 705 LNNAVNPVFSK 715 (763)
Q Consensus 705 l~~~~~~l~~k 715 (763)
|+..+.+|..+
T Consensus 200 L~~~~~~i~~r 210 (227)
T 1u00_A 200 VDKQTQDFAAR 210 (227)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999988753
No 65
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=80.69 E-value=0.86 Score=41.91 Aligned_cols=23 Identities=22% Similarity=0.504 Sum_probs=19.0
Q ss_pred CCCcceEEEEcCccceEEEEEECC
Q psy740 1 MAGMSVIGIDFGNESCFIAAARAG 24 (763)
Q Consensus 1 m~~~~viGID~GTt~s~va~~~~g 24 (763)
|. |.++|||+|+..|.+|+.+..
T Consensus 1 ~~-mriLGiDpG~~riGvAv~d~~ 23 (150)
T 1vhx_A 1 MS-LRILGLDLGTKTLGVALSDEM 23 (150)
T ss_dssp -C-EEEEEEEECSSEEEEEEECTT
T ss_pred CC-CEEEEEEccCCEEEEEEEECC
Confidence 66 789999999999999998643
No 66
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=79.81 E-value=4.7 Score=46.63 Aligned_cols=74 Identities=14% Similarity=0.059 Sum_probs=52.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCcchHHHHHHHHH
Q psy740 625 TKAFENIFCSIQIAQKKISMFKEGDERLNHLDAAEITVVEEKVANALKWAENAQSLMNEFTDRTKDAPVPTSEIKNEMQN 704 (763)
Q Consensus 625 p~a~~~l~~~l~~~~~~l~~~~~~~~~~~~~t~~e~~~l~~~~~e~~~Wl~~~~~~q~~~~~~~~dP~~~~~di~~k~~~ 704 (763)
-.+...|...+..++..|.. .-...+++++++.+.+.++++..||.+.-... ...++..|++.
T Consensus 550 ~~~~n~le~~i~~~~~~l~~-----~~~~~~~~~~~~~~~~~l~~~~~wl~~~~~~~------------~~~~~~~~~~~ 612 (675)
T 3d2f_A 550 EDRKNTLEEYIYTLRGKLEE-----EYAPFASDAEKTKLQGMLNKAEEWLYDEGFDS------------IKAKYIAKYEE 612 (675)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-----TTGGGSCHHHHHHHHHHHHHHHHHTTTGGGGC------------CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-----HHHhhCCHHHHHHHHHHHHHHHHHHhcCCchh------------hHHHHHHHHHH
Confidence 34445566666666666532 11235899999999999999999997521111 23588999999
Q ss_pred HHHhhhhhhcC
Q psy740 705 LNNAVNPVFSK 715 (763)
Q Consensus 705 l~~~~~~l~~k 715 (763)
|+..++++..+
T Consensus 613 l~~~~~~i~~r 623 (675)
T 3d2f_A 613 LASLGNIIRGR 623 (675)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998854
No 67
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=79.55 E-value=1.1 Score=50.09 Aligned_cols=24 Identities=21% Similarity=0.203 Sum_probs=20.3
Q ss_pred CCCcceEEEEcCccceEEEEEECC
Q psy740 1 MAGMSVIGIDFGNESCFIAAARAG 24 (763)
Q Consensus 1 m~~~~viGID~GTt~s~va~~~~g 24 (763)
|.|..++|||+|||++++++++..
T Consensus 1 M~m~~~lgIDiGtts~K~~l~d~~ 24 (504)
T 3ll3_A 1 MSLKYIIGMDVGTTATKGVLYDIN 24 (504)
T ss_dssp -CCEEEEEEEECSSEEEEEEEETT
T ss_pred CCCCEEEEEEecCCceEEEEEcCC
Confidence 776789999999999999998744
No 68
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=79.30 E-value=11 Score=42.93 Aligned_cols=65 Identities=14% Similarity=0.164 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHHHHhhcCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHh
Q psy740 629 ENIFCSIQIAQKKISMFKEGDERLNHLDAAEITVVEEKVANALKWAENAQSLMNEFTDRTKDAPVPTSEIKNEMQNLNNA 708 (763)
Q Consensus 629 ~~l~~~l~~~~~~l~~~~~~~~~~~~~t~~e~~~l~~~~~e~~~Wl~~~~~~q~~~~~~~~dP~~~~~di~~k~~~l~~~ 708 (763)
..+...+..++..++.+. ..+++++++.+.+.++++..||+.. + ..+|+.+++.|+..
T Consensus 537 n~~e~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~----~------------~~~~~~~~~~l~~~ 594 (605)
T 4b9q_A 537 NQGDHLLHSTRKQVEEAG------DKLPADDKTAIESALTALETALKGE----D------------KAAIEAKMQELAQV 594 (605)
T ss_dssp HHHHHHHHHHHHHHHHHG------GGSCHHHHHHHHHHHHHHHHHHHSS----C------------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhh------hhCCHHHHHHHHHHHHHHHHHHhcC----C------------HHHHHHHHHHHHHH
Confidence 345555556666555432 2478999999999999999999742 2 36899999999999
Q ss_pred hhhhhcC
Q psy740 709 VNPVFSK 715 (763)
Q Consensus 709 ~~~l~~k 715 (763)
++++..+
T Consensus 595 ~~~~~~~ 601 (605)
T 4b9q_A 595 SQKLMEI 601 (605)
T ss_dssp THHHHHH
T ss_pred HHHHHHH
Confidence 9998764
No 69
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=78.86 E-value=6 Score=45.12 Aligned_cols=67 Identities=13% Similarity=0.154 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHH
Q psy740 626 KAFENIFCSIQIAQKKISMFKEGDERLNHLDAAEITVVEEKVANALKWAENAQSLMNEFTDRTKDAPVPTSEIKNEMQNL 705 (763)
Q Consensus 626 ~a~~~l~~~l~~~~~~l~~~~~~~~~~~~~t~~e~~~l~~~~~e~~~Wl~~~~~~q~~~~~~~~dP~~~~~di~~k~~~l 705 (763)
++...+...+..++..|..+. ..+++++++.+.+.+++++.||+. +. ..+|+.+++.|
T Consensus 534 ~~~n~~e~~~~~~~~~l~~~~------~~~~~~~~~~i~~~~~~~~~~l~~----~~------------~~~~~~~~~~l 591 (605)
T 2kho_A 534 QTRNQGDHLLHSTRKQVEEAG------DKLPADDKTAIESALTALETALKG----ED------------KAAIEAKMQEL 591 (605)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG------GGSCHHHHHHHHHHHHHHHHHTTS----SC------------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhh------ccCCHHHHHHHHHHHHHHHHHHhc----CC------------HHHHHHHHHHH
Confidence 334455556666666665432 247899999999999999999973 22 36899999999
Q ss_pred HHhhhhhhc
Q psy740 706 NNAVNPVFS 714 (763)
Q Consensus 706 ~~~~~~l~~ 714 (763)
+..++++..
T Consensus 592 ~~~~~~~~~ 600 (605)
T 2kho_A 592 AQVSQKLME 600 (605)
T ss_dssp HTTCHHHHH
T ss_pred HHHHHHHHH
Confidence 999998875
No 70
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=77.60 E-value=1.1 Score=49.79 Aligned_cols=23 Identities=26% Similarity=0.319 Sum_probs=19.9
Q ss_pred CCCcceEEEEcCccceEEEEEEC
Q psy740 1 MAGMSVIGIDFGNESCFIAAARA 23 (763)
Q Consensus 1 m~~~~viGID~GTt~s~va~~~~ 23 (763)
|.|+.++|||+|||++++++++.
T Consensus 1 m~~~~~lgiDiGtts~k~~l~d~ 23 (489)
T 2uyt_A 1 MTFRNCVAVDLGASSGRVMLARY 23 (489)
T ss_dssp -CCEEEEEEEECSSEEEEEEEEE
T ss_pred CCcceEEEEEecCCCceEEEEEe
Confidence 88778999999999999999863
No 71
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=77.39 E-value=1.4 Score=37.25 Aligned_cols=21 Identities=29% Similarity=0.396 Sum_probs=18.1
Q ss_pred cceEEEEcCccceEEEEEECC
Q psy740 4 MSVIGIDFGNESCFIAAARAG 24 (763)
Q Consensus 4 ~~viGID~GTt~s~va~~~~g 24 (763)
|.++|||||+..+.||+.+..
T Consensus 1 mriLglD~G~kriGvAvsd~~ 21 (98)
T 1iv0_A 1 MRVGALDVGEARIGLAVGEEG 21 (98)
T ss_dssp CCEEEEEESSSEEEEEEECSC
T ss_pred CcEEEEEeCCCEEEEEEEeCC
Confidence 458999999999999998754
No 72
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=76.45 E-value=1.3 Score=49.62 Aligned_cols=24 Identities=21% Similarity=0.171 Sum_probs=19.1
Q ss_pred CCCc-ceEEEEcCccceEEEEEECC
Q psy740 1 MAGM-SVIGIDFGNESCFIAAARAG 24 (763)
Q Consensus 1 m~~~-~viGID~GTt~s~va~~~~g 24 (763)
|+|| .++|||+|||++++++++..
T Consensus 1 ~~mm~~~lgIDiGtts~k~~l~d~~ 25 (511)
T 3hz6_A 1 MSLAFYIATFDIGTTEVKAALADRD 25 (511)
T ss_dssp -CCCCEEEEEEECSSEEEEEEECTT
T ss_pred CccccEEEEEEeCCCceEEEEECCC
Confidence 6544 68999999999999998743
No 73
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=75.10 E-value=1.7 Score=44.08 Aligned_cols=23 Identities=26% Similarity=0.502 Sum_probs=19.1
Q ss_pred CCCcceEEEEcCccceEEEEEECC
Q psy740 1 MAGMSVIGIDFGNESCFIAAARAG 24 (763)
Q Consensus 1 m~~~~viGID~GTt~s~va~~~~g 24 (763)
|. |.++|||+|+|++++++++..
T Consensus 1 m~-~~~lGiD~Gst~~k~~l~d~~ 23 (270)
T 1hux_A 1 MS-IYTLGIDVGSTASKCIILKDG 23 (270)
T ss_dssp -C-CEEEEEEECSSEEEEEEEETT
T ss_pred CC-cEEEEEEeccceEEEEEEeCC
Confidence 54 578999999999999999853
No 74
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=72.68 E-value=1.5 Score=48.54 Aligned_cols=20 Identities=20% Similarity=0.210 Sum_probs=17.1
Q ss_pred ceEEEEcCccceEEEEEECC
Q psy740 5 SVIGIDFGNESCFIAAARAG 24 (763)
Q Consensus 5 ~viGID~GTt~s~va~~~~g 24 (763)
.++|||+|||++++++++..
T Consensus 7 ~~lgIDiGTts~Ka~l~d~~ 26 (482)
T 3h6e_A 7 ATIVIDLGKTLSKVSLWDLD 26 (482)
T ss_dssp -CEEEEECSSEEEEEEECTT
T ss_pred eEEEEEcCCCCeEEEEEECC
Confidence 68999999999999999743
No 75
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=71.32 E-value=9.9 Score=40.11 Aligned_cols=67 Identities=15% Similarity=0.151 Sum_probs=41.9
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcC-CCCC------CCCChhHHHHhHHHHHcc
Q psy740 253 CKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQ-KTPS------TTLNQDEAVARGCALQCA 324 (763)
Q Consensus 253 ~~~l~~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg-~~~~------~~~n~deaVa~GAa~~aa 324 (763)
..-|.+=+...|-+.++.... .++.|+++||+.+.|.+.+.|++.++ ..+. .+.+.-||+|. |+.|.
T Consensus 262 ~ATLt~~TA~sIa~~~~~~~~---~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~aF--A~LA~ 335 (371)
T 3qbx_A 262 QATLLELSARSISESLLDAQP---DCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAF--AWLAH 335 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHCT---TCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHHH--HHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccC---CCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHHH--HHHHH
Confidence 333444444445555544332 36789999999999999999999985 3322 22445566554 55553
No 76
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=71.12 E-value=2.5 Score=47.76 Aligned_cols=24 Identities=25% Similarity=0.239 Sum_probs=18.3
Q ss_pred CCC-cceEEEEcCccceEEEEEECC
Q psy740 1 MAG-MSVIGIDFGNESCFIAAARAG 24 (763)
Q Consensus 1 m~~-~~viGID~GTt~s~va~~~~g 24 (763)
|+. ..+||||+|||++++++++..
T Consensus 1 m~~~~~~lgIDiGtts~ka~l~d~~ 25 (554)
T 3l0q_A 1 MSLASYFIGVDVGTGSARAGVFDLQ 25 (554)
T ss_dssp ---CCEEEEEEECSSEEEEEEEETT
T ss_pred CCCCcEEEEEEECcccEEEEEECCC
Confidence 664 468999999999999999744
No 77
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=70.89 E-value=2.5 Score=47.20 Aligned_cols=22 Identities=27% Similarity=0.440 Sum_probs=18.5
Q ss_pred CCC-cceEEEEcCccceEEEEEE
Q psy740 1 MAG-MSVIGIDFGNESCFIAAAR 22 (763)
Q Consensus 1 m~~-~~viGID~GTt~s~va~~~ 22 (763)
|+. ..+||||+|||++++++++
T Consensus 1 m~~~~~~lgIDiGtts~ka~l~d 23 (515)
T 3i8b_A 1 MSLRTLVAGVDTSTQSCKVRVTD 23 (515)
T ss_dssp -CCSCEEEEEEECSSEEEEEEEE
T ss_pred CCCCcEEEEEEeccccEEEEEEE
Confidence 653 4689999999999999998
No 78
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=69.42 E-value=9.9 Score=40.11 Aligned_cols=68 Identities=9% Similarity=0.086 Sum_probs=44.9
Q ss_pred HHhHHHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcCC-CC------CCCCChhHHHHhHHHHHc
Q psy740 251 ELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQK-TP------STTLNQDEAVARGCALQC 323 (763)
Q Consensus 251 ~l~~~l~~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg~-~~------~~~~n~deaVa~GAa~~a 323 (763)
.+..-|.+=+...|-+.+.... ..+.|+++||+.+.|.+.+.|++.++. .+ ..+.+.-||+|. |+.|
T Consensus 267 Dv~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aF--A~LA 340 (370)
T 3cqy_A 267 DIQSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAF--AWLA 340 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHH--HHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHH--HHHH
Confidence 4444455555555556665442 356999999999999999999999943 32 223455677766 4555
Q ss_pred c
Q psy740 324 A 324 (763)
Q Consensus 324 a 324 (763)
.
T Consensus 341 ~ 341 (370)
T 3cqy_A 341 M 341 (370)
T ss_dssp H
T ss_pred H
Confidence 3
No 79
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=68.46 E-value=2.9 Score=46.65 Aligned_cols=24 Identities=29% Similarity=0.209 Sum_probs=19.3
Q ss_pred CC-CcceEEEEcCccceEEEEEECC
Q psy740 1 MA-GMSVIGIDFGNESCFIAAARAG 24 (763)
Q Consensus 1 m~-~~~viGID~GTt~s~va~~~~g 24 (763)
|+ +..+||||+|||++++++++..
T Consensus 1 m~~~~~~lgIDiGtts~k~~l~d~~ 25 (506)
T 3h3n_X 1 MAEKNYVMAIDQGTTSSRAIIFDRN 25 (506)
T ss_dssp -CCCCEEEEEEECSSEEEEEEEETT
T ss_pred CCCCCEEEEEEcCCCceEEEEECCC
Confidence 65 4468999999999999998743
No 80
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=67.54 E-value=3.2 Score=41.94 Aligned_cols=71 Identities=21% Similarity=0.222 Sum_probs=40.5
Q ss_pred EeeHHHHHHHhHHHHHHHHHHHHHHHHHcCCC--CCCccEEEEecCCCCcHHHHHHHHHhcCCCCCCCCChhHHHHhHHH
Q psy740 243 EMCRSEMEELCKDVFENVEKTLKDCLEKSKLA--LSDIHSVEIVGGSSRIPAIKGLIEKIFQKTPSTTLNQDEAVARGCA 320 (763)
Q Consensus 243 ~itr~~fe~l~~~l~~~i~~~i~~~l~~a~~~--~~~i~~V~lvGGssriP~v~~~l~~~fg~~~~~~~n~deaVa~GAa 320 (763)
.+-++.-+.+-..++--....|+.++++..-. ...--.|+++||.+++- ... +....++|+ -+-.|..
T Consensus 181 ~~g~nT~~ai~sGi~~g~~g~i~~~i~~~~~~~~~~~~~~vi~TGG~a~~l------~~~---~~~~~~~~~-LvL~GL~ 250 (266)
T 3djc_A 181 VVGRSTIESIQSGVYYGVLGACKELIQRIHHEAFNGDQILILATGGFASLF------DKQ---GLYDHLVPD-LVLQGIR 250 (266)
T ss_dssp SCBSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEEESTTGGGG------TTT---TCCSEECTT-HHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCEEEEECCChHHh------ccC---CCCCEECcC-hHHHHHH
Confidence 46677777777777766666666666543211 11124799999987532 111 111234555 6777876
Q ss_pred HHc
Q psy740 321 LQC 323 (763)
Q Consensus 321 ~~a 323 (763)
+..
T Consensus 251 ~i~ 253 (266)
T 3djc_A 251 LAA 253 (266)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 81
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=66.98 E-value=7 Score=45.74 Aligned_cols=63 Identities=19% Similarity=0.212 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhc---CCCCCCCC---ChhHHHHhHHHHHcchh
Q psy740 259 NVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIF---QKTPSTTL---NQDEAVARGCALQCAML 326 (763)
Q Consensus 259 ~i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~f---g~~~~~~~---n~deaVa~GAa~~aa~l 326 (763)
-+.+.+.++.++.+ ++.|.|.||......+.+.|.+.+ |.++..+. --|..+|+|+|++|+..
T Consensus 692 ~L~~~~~~a~~~tg-----~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~~ 760 (772)
T 4g9i_A 692 AFAHTAVERAREFG-----VKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGLY 760 (772)
T ss_dssp HHHHHHHHHHHTTT-----CSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-----cCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHHH
Confidence 34445555555444 678999999999999999999987 44444332 23999999999888653
No 82
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=66.79 E-value=4 Score=36.77 Aligned_cols=21 Identities=24% Similarity=0.354 Sum_probs=18.6
Q ss_pred cceEEEEcCccceEEEEEECC
Q psy740 4 MSVIGIDFGNESCFIAAARAG 24 (763)
Q Consensus 4 ~~viGID~GTt~s~va~~~~g 24 (763)
..++|||||+..+.||+.++.
T Consensus 3 ~~iLglD~G~kriGvAvsd~~ 23 (138)
T 1nu0_A 3 GTLMAFDFGTKSIGVAVGQRI 23 (138)
T ss_dssp CEEEEEECCSSEEEEEEEETT
T ss_pred CeEEEEEeCCCEEEEEEEcCC
Confidence 468999999999999998865
No 83
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=66.57 E-value=8.9 Score=40.10 Aligned_cols=68 Identities=15% Similarity=0.131 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhc---CCCCCCC---CChhHHHHhHHHHHcchhcC
Q psy740 256 VFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIF---QKTPSTT---LNQDEAVARGCALQCAMLSP 328 (763)
Q Consensus 256 l~~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~f---g~~~~~~---~n~deaVa~GAa~~aa~ls~ 328 (763)
+.+.+...+.++++..+ ++.|+|.||......+++.|.+.+ |.++..+ .--|.++++|+|.+.....+
T Consensus 233 l~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~g 306 (334)
T 3eno_A 233 AFAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKSG 306 (334)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHcC
Confidence 44555666666666665 578999999999999999999877 5443332 24588999999876544333
No 84
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=65.51 E-value=3.2 Score=41.60 Aligned_cols=24 Identities=25% Similarity=0.414 Sum_probs=20.2
Q ss_pred CCCcceEEEEcCccceEEEEEECCc
Q psy740 1 MAGMSVIGIDFGNESCFIAAARAGG 25 (763)
Q Consensus 1 m~~~~viGID~GTt~s~va~~~~g~ 25 (763)
|.+| .+.||.|+|++++++++++.
T Consensus 1 ~~~M-~L~IDIGNT~ik~gl~~~~~ 24 (249)
T 3bex_A 1 MDPM-YLLVDVGNTHSVFSITEDGK 24 (249)
T ss_dssp CCCE-EEEEEECSSEEEEEEESSSS
T ss_pred CCce-EEEEEECCCeEEEEEEECCE
Confidence 6655 79999999999999997664
No 85
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=65.48 E-value=3.3 Score=46.96 Aligned_cols=23 Identities=30% Similarity=0.359 Sum_probs=17.9
Q ss_pred CCC-cceEEEEcCccceEEEEEEC
Q psy740 1 MAG-MSVIGIDFGNESCFIAAARA 23 (763)
Q Consensus 1 m~~-~~viGID~GTt~s~va~~~~ 23 (763)
|+. ..+||||+|||++++++++.
T Consensus 1 m~~~~~~lgIDiGTts~Ka~l~d~ 24 (572)
T 3jvp_A 1 MSLTKYTIGVDYGTESGRAVLIDL 24 (572)
T ss_dssp ----CEEEEEEECSSEEEEEEEET
T ss_pred CCCCCEEEEEecCCcceEEEEEEC
Confidence 653 46899999999999999974
No 86
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=64.96 E-value=8.3 Score=40.21 Aligned_cols=65 Identities=9% Similarity=0.100 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhc---CCCCCCCC---ChhHHHHhHHHHHcch
Q psy740 256 VFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIF---QKTPSTTL---NQDEAVARGCALQCAM 325 (763)
Q Consensus 256 l~~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~f---g~~~~~~~---n~deaVa~GAa~~aa~ 325 (763)
+.+.+...+.++.+..+ ++.|+|.||......+++.|.+.+ |.++..+. -.|.++++|+|.+...
T Consensus 228 l~~~l~~~~~~~~~~~~-----~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~ 298 (330)
T 2ivn_A 228 AFAALVEVTERAVAHTE-----KDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMY 298 (330)
T ss_dssp HHHHHHHHHHHHHHHHC-----CSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC-----CCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHHHHH
Confidence 33455555555555543 568999999999999999999876 44444333 3377899999876543
No 87
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=63.99 E-value=3.5 Score=45.79 Aligned_cols=20 Identities=20% Similarity=0.117 Sum_probs=17.8
Q ss_pred cceEEEEcCccceEEEEEEC
Q psy740 4 MSVIGIDFGNESCFIAAARA 23 (763)
Q Consensus 4 ~~viGID~GTt~s~va~~~~ 23 (763)
..++|||+|||++++++++.
T Consensus 3 ~~~lgiDiGtt~~k~~l~d~ 22 (497)
T 2zf5_O 3 KFVLSLDEGTTSARAIIFDR 22 (497)
T ss_dssp CEEEEEEECSSEEEEEEECT
T ss_pred cEEEEEecCCchhEEEEECC
Confidence 46899999999999999874
No 88
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=63.97 E-value=4.3 Score=45.26 Aligned_cols=21 Identities=33% Similarity=0.476 Sum_probs=18.2
Q ss_pred cceEEEEcCccceEEEEEECC
Q psy740 4 MSVIGIDFGNESCFIAAARAG 24 (763)
Q Consensus 4 ~~viGID~GTt~s~va~~~~g 24 (763)
..+||||+|||++++++++..
T Consensus 7 ~~~lgIDiGtts~k~~l~d~~ 27 (508)
T 3ifr_A 7 RQVIGLDIGTTSTIAILVRLP 27 (508)
T ss_dssp CEEEEEEECSSEEEEEEEETT
T ss_pred CEEEEEEecCcceEEEEECCC
Confidence 368999999999999998744
No 89
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=63.96 E-value=9.5 Score=43.57 Aligned_cols=65 Identities=11% Similarity=0.134 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhc-CCCCC---CCCChhHHHHhHHHHHcch
Q psy740 256 VFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIF-QKTPS---TTLNQDEAVARGCALQCAM 325 (763)
Q Consensus 256 l~~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~f-g~~~~---~~~n~deaVa~GAa~~aa~ 325 (763)
+.+.+.+.+.++.+..+ ++.|+|+||......+++.|.+.+ |.++. ...--|-++|+|.|+.|+.
T Consensus 583 la~~L~~~~~ra~~~~g-----~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 583 LAQGFAALMREQATMRG-----ITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp HHHHHHHHHHHHHHTTT-----CCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcC-----CCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 33444444555555443 679999999999999999999988 54432 2234599999999998854
No 90
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=60.38 E-value=5.4 Score=44.77 Aligned_cols=22 Identities=23% Similarity=0.353 Sum_probs=18.7
Q ss_pred CcceEEEEcCccceEEEEEECC
Q psy740 3 GMSVIGIDFGNESCFIAAARAG 24 (763)
Q Consensus 3 ~~~viGID~GTt~s~va~~~~g 24 (763)
+..++|||+|||++++++++..
T Consensus 9 ~~~~lgID~GTts~Ka~l~d~~ 30 (538)
T 4bc3_A 9 RRCCLGWDFSTQQVKVVAVDAE 30 (538)
T ss_dssp CCEEEEEEECSSEEEEEEEETT
T ss_pred CCEEEEEEEcCcCEEEEEECCC
Confidence 3478999999999999998743
No 91
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=59.85 E-value=4.7 Score=44.84 Aligned_cols=21 Identities=14% Similarity=0.088 Sum_probs=18.1
Q ss_pred cceEEEEcCccceEEEEEECC
Q psy740 4 MSVIGIDFGNESCFIAAARAG 24 (763)
Q Consensus 4 ~~viGID~GTt~s~va~~~~g 24 (763)
..++|||+|||++++++++..
T Consensus 4 ~~~lgIDiGtT~~k~~l~d~~ 24 (503)
T 2w40_A 4 NVILSIDQSTQSTKVFFYDEE 24 (503)
T ss_dssp EEEEEEEECSSEEEEEEEETT
T ss_pred cEEEEEEeCCcceEEEEECCC
Confidence 368999999999999998744
No 92
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=59.70 E-value=4.5 Score=45.11 Aligned_cols=21 Identities=14% Similarity=0.175 Sum_probs=18.3
Q ss_pred CcceEEEEcCccceEEEEEEC
Q psy740 3 GMSVIGIDFGNESCFIAAARA 23 (763)
Q Consensus 3 ~~~viGID~GTt~s~va~~~~ 23 (763)
|+.+||||+|||++++++++.
T Consensus 2 ~~~~lgIDiGtts~k~~l~d~ 22 (510)
T 2p3r_A 2 KKYIVALDQGTTSSRAVVMDH 22 (510)
T ss_dssp CCEEEEEEECSSEEEEEEECT
T ss_pred CcEEEEEEcCCcceEEEEECC
Confidence 357899999999999999864
No 93
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=59.22 E-value=5.1 Score=44.81 Aligned_cols=20 Identities=20% Similarity=0.217 Sum_probs=17.6
Q ss_pred ceEEEEcCccceEEEEEECC
Q psy740 5 SVIGIDFGNESCFIAAARAG 24 (763)
Q Consensus 5 ~viGID~GTt~s~va~~~~g 24 (763)
.+||||+|||++++++++..
T Consensus 27 ~~lgIDiGtts~k~~l~d~~ 46 (520)
T 4e1j_A 27 YILAIDQGTTSTRAIVFDGN 46 (520)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred eEEEEEeCCcceEEEEECCC
Confidence 58999999999999998743
No 94
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=58.91 E-value=4.5 Score=44.89 Aligned_cols=21 Identities=14% Similarity=0.086 Sum_probs=17.7
Q ss_pred cceEEEEcCccceEEEEEECC
Q psy740 4 MSVIGIDFGNESCFIAAARAG 24 (763)
Q Consensus 4 ~~viGID~GTt~s~va~~~~g 24 (763)
..++|||+|||++++++++..
T Consensus 2 ~~~lgiDiGtT~~k~~l~d~~ 22 (495)
T 2dpn_A 2 AFLLALDQGTTSSRAILFTLE 22 (495)
T ss_dssp -CEEEEEECSSEEEEEEECTT
T ss_pred cEEEEEeeCCcceEEEEECCC
Confidence 468999999999999998743
No 95
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=58.57 E-value=5.4 Score=40.80 Aligned_cols=47 Identities=13% Similarity=0.145 Sum_probs=34.6
Q ss_pred CccEEEEecCCCCcHHHHHHHHHhcC-CCCCCCCChhHHHHhHHHHHcc
Q psy740 277 DIHSVEIVGGSSRIPAIKGLIEKIFQ-KTPSTTLNQDEAVARGCALQCA 324 (763)
Q Consensus 277 ~i~~V~lvGGssriP~v~~~l~~~fg-~~~~~~~n~deaVa~GAa~~aa 324 (763)
+.+.|+|.||.+..+.+.+.|++.+. .++..+. .+.+.++|||+.+.
T Consensus 239 ~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~ 286 (299)
T 2e2o_A 239 GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAY 286 (299)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHH
T ss_pred CCCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHH
Confidence 35679999988877888888887774 2454444 56789999998774
No 96
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=57.84 E-value=5.3 Score=44.39 Aligned_cols=21 Identities=19% Similarity=0.146 Sum_probs=18.1
Q ss_pred cceEEEEcCccceEEEEEECC
Q psy740 4 MSVIGIDFGNESCFIAAARAG 24 (763)
Q Consensus 4 ~~viGID~GTt~s~va~~~~g 24 (763)
+.+||||+|||++++++++..
T Consensus 6 ~~~lgIDiGtts~k~~l~d~~ 26 (501)
T 3g25_A 6 KYILSIDQGTTSSRAILFNQK 26 (501)
T ss_dssp CEEEEEEECSSEEEEEEECTT
T ss_pred cEEEEEEeCccceEEEEEcCC
Confidence 468999999999999998743
No 97
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=56.88 E-value=9.7 Score=35.11 Aligned_cols=19 Identities=26% Similarity=0.350 Sum_probs=17.0
Q ss_pred cceEEEEcCccceEEEEEE
Q psy740 4 MSVIGIDFGNESCFIAAAR 22 (763)
Q Consensus 4 ~~viGID~GTt~s~va~~~ 22 (763)
|.++|||-|++++..|++.
T Consensus 1 m~ILGIDPGl~~tG~gvi~ 19 (158)
T 1hjr_A 1 AIILGIDPGSRVTGYGVIR 19 (158)
T ss_dssp CEEEEEECCSSEEEEEEEE
T ss_pred CEEEEEccCCCCeeEEEEE
Confidence 5699999999999999875
No 98
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=56.51 E-value=19 Score=41.94 Aligned_cols=64 Identities=13% Similarity=0.051 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhc---CCCCCC---CCChhHHHHhHHHHHcchh
Q psy740 258 ENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIF---QKTPST---TLNQDEAVARGCALQCAML 326 (763)
Q Consensus 258 ~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~f---g~~~~~---~~n~deaVa~GAa~~aa~l 326 (763)
+.+.+.+.++.+..+ ++.|+|.||......+++.|.+.+ |.++.. ..--|-++|+|.|+.|+..
T Consensus 679 ~~L~~~~~~a~~~~g-----~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~ 748 (761)
T 3vth_A 679 NFTYDLANLIRKETG-----INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKI 748 (761)
T ss_dssp HHHHHHHHHHHHHHC-----CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-----CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHH
Confidence 344444555555554 578999999999999999999886 444322 2335999999999988654
No 99
>3u0c_A Invasin IPAB, 62 kDa antigen; translocator, type three secretion system, coiled-coil, VIRU cell invasion; 2.05A {Shigella flexneri} PDB: 3gz1_P
Probab=56.48 E-value=1.2e+02 Score=27.61 Aligned_cols=65 Identities=12% Similarity=0.170 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCcccCCCCHHHHHHHHH
Q psy740 601 ISKLDELKAIGEKIRQRKVDYEEKTKAFENIFCSIQIAQKKISMFKEGDERLNHLDAAEITVVEE 665 (763)
Q Consensus 601 ~~kl~eL~~~~~pi~~R~~E~~~rp~a~~~l~~~l~~~~~~l~~~~~~~~~~~~~t~~e~~~l~~ 665 (763)
..-+.+-++..+-...-...+..-..++..+.+.++.+...|..+.-.+|.|..++.+|+..-.+
T Consensus 99 qTaL~eAQ~AtD~y~~Ainny~~Ads~~~~lekKvn~aq~kLs~L~P~dP~Y~K~~~~~~~~~~~ 163 (201)
T 3u0c_A 99 NTLLSETEGLTRDYEKQINKLKNADSKIKDLENKINQIQTRLSELDPESPEKKKLSREEIQLTIK 163 (201)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccHHHHhhhhh
Confidence 44455555555566666667777778888999999999999988888888898888888875443
No 100
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=52.70 E-value=7.2 Score=43.58 Aligned_cols=19 Identities=16% Similarity=0.237 Sum_probs=16.9
Q ss_pred ceEEEEcCccceEEEEEEC
Q psy740 5 SVIGIDFGNESCFIAAARA 23 (763)
Q Consensus 5 ~viGID~GTt~s~va~~~~ 23 (763)
.+||||+|||++++++++.
T Consensus 5 YvlgID~GTss~Ka~l~d~ 23 (526)
T 3ezw_A 5 YIVALDQGTTSSRAVVMDH 23 (526)
T ss_dssp EEEEEEECSSEEEEEEECT
T ss_pred EEEEEEccccceeeeEEcC
Confidence 5899999999999998864
No 101
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=52.05 E-value=7.8 Score=39.55 Aligned_cols=22 Identities=23% Similarity=0.253 Sum_probs=18.3
Q ss_pred cceEEEEcCccceEEEEEECCc
Q psy740 4 MSVIGIDFGNESCFIAAARAGG 25 (763)
Q Consensus 4 ~~viGID~GTt~s~va~~~~g~ 25 (763)
+..+|||+|+|.+++++++++.
T Consensus 20 ~~~iGIDiGsTt~K~V~~~~~~ 41 (287)
T 2ews_A 20 HMKVGIDAGGTLIKIVQEQDNQ 41 (287)
T ss_dssp -CEEEEEECSSEEEEEEECSSC
T ss_pred CeEEEEEEChhhEEEEEEcCCE
Confidence 4689999999999999986654
No 102
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=50.52 E-value=9.5 Score=35.46 Aligned_cols=19 Identities=32% Similarity=0.301 Sum_probs=17.1
Q ss_pred cceEEEEcCccceEEEEEE
Q psy740 4 MSVIGIDFGNESCFIAAAR 22 (763)
Q Consensus 4 ~~viGID~GTt~s~va~~~ 22 (763)
|.++|||-|++++..++++
T Consensus 1 MrILGIDPGl~~tG~gvi~ 19 (166)
T 4ep4_A 1 MVVAGIDPGITHLGLGVVA 19 (166)
T ss_dssp CEEEEEECCSSEEEEEEEE
T ss_pred CEEEEEccccCceEEEEEE
Confidence 5799999999999999875
No 103
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=48.41 E-value=10 Score=38.82 Aligned_cols=64 Identities=11% Similarity=0.052 Sum_probs=41.1
Q ss_pred HhHHHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCC--cHHHHHHHHHhcCCCCCCCCChhHHHHhHHHHHcc
Q psy740 252 LCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSR--IPAIKGLIEKIFQKTPSTTLNQDEAVARGCALQCA 324 (763)
Q Consensus 252 l~~~l~~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssr--iP~v~~~l~~~fg~~~~~~~n~deaVa~GAa~~aa 324 (763)
.+..++++....+-..+...-. . +.+.|+|.||-++ .|.+.+.+.+.+- -++.+.++|||+.|.
T Consensus 227 ~A~~i~~~~~~~L~~~l~~l~~-~-~p~~VvlgGgv~~~~~~~l~~~l~~~i~-------~~~~~~~~GAa~la~ 292 (305)
T 1zc6_A 227 EADALLRQAGEDAWAIARALDP-Q-DELPVALCGGLGQALRDWLPPGFRQRLV-------APQGDSAQGALLLLQ 292 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCT-T-CCSCEEEESHHHHHTGGGSCHHHHHHCC-------CCSSCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-C-CCCeEEEECCchHhHHHHHHHHHHhhcc-------CCCCCHHHHHHHHHh
Confidence 3455666666666666554332 2 5678888888764 5666667766531 145678999999874
No 104
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=48.27 E-value=28 Score=39.02 Aligned_cols=67 Identities=15% Similarity=0.107 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcCC-CCC-CCCChhHHHHhHHHHHcchhcCC
Q psy740 258 ENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQK-TPS-TTLNQDEAVARGCALQCAMLSPA 329 (763)
Q Consensus 258 ~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg~-~~~-~~~n~deaVa~GAa~~aa~ls~~ 329 (763)
+-+...+.++.+..+ ++.|.|.||......+.+.|.+..+. .+. ...--|.++++|+|+++....+.
T Consensus 293 ~~L~~~~~~a~~~tg-----~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~a~~~~g~ 361 (576)
T 3ven_A 293 RAVFGLADSVLARTG-----ERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAAVAVELGD 361 (576)
T ss_dssp HHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcC-----CCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHHHHHHcCC
Confidence 344455555555554 67999999999999999999876553 222 22355899999999998766443
No 105
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=46.23 E-value=22 Score=36.47 Aligned_cols=48 Identities=15% Similarity=0.130 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcCCC
Q psy740 254 KDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQKT 304 (763)
Q Consensus 254 ~~l~~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg~~ 304 (763)
......+...|+++|++++++++||+.|+.-|+++++ -+.+.+.||.+
T Consensus 214 ~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg~~ 261 (317)
T 1hnj_A 214 KVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRI---ISATAKKLGMS 261 (317)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHH---HHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCCC
Confidence 3445577889999999999999999999999998775 45688888753
No 106
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=45.96 E-value=24 Score=35.81 Aligned_cols=20 Identities=25% Similarity=0.396 Sum_probs=18.1
Q ss_pred cceEEEEcCccceEEEEEEC
Q psy740 4 MSVIGIDFGNESCFIAAARA 23 (763)
Q Consensus 4 ~~viGID~GTt~s~va~~~~ 23 (763)
|.++|||+|+|++.+++++.
T Consensus 2 M~~lgiDiGgt~~~~~l~d~ 21 (299)
T 2e2o_A 2 MIIVGVDAGGTKTKAVAYDC 21 (299)
T ss_dssp CCEEEEEECSSCEEEEEECT
T ss_pred eEEEEEEeCCCcEEEEEEcC
Confidence 58999999999999999864
No 107
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=45.16 E-value=13 Score=38.68 Aligned_cols=21 Identities=10% Similarity=0.045 Sum_probs=18.2
Q ss_pred cceEEEEcCccceEEEEEECC
Q psy740 4 MSVIGIDFGNESCFIAAARAG 24 (763)
Q Consensus 4 ~~viGID~GTt~s~va~~~~g 24 (763)
|.+||||+|+|++.+++++..
T Consensus 6 ~~~lgiDiGgt~~~~~l~d~~ 26 (347)
T 2ch5_A 6 AIYGGVEGGGTRSEVLLVSED 26 (347)
T ss_dssp CEEEEEEECTTCEEEEEEETT
T ss_pred eEEEEEEcCccceEEEEEeCC
Confidence 479999999999999998743
No 108
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=44.97 E-value=10 Score=41.85 Aligned_cols=18 Identities=28% Similarity=0.460 Sum_probs=16.3
Q ss_pred eEEEEcCccceEEEEEEC
Q psy740 6 VIGIDFGNESCFIAAARA 23 (763)
Q Consensus 6 viGID~GTt~s~va~~~~ 23 (763)
++|||+|||++++++++.
T Consensus 2 ~lgiDiGtt~~k~~l~d~ 19 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNE 19 (484)
T ss_dssp EEEEEECSSEEEEEEECT
T ss_pred EEEEEecCcccEEEEECC
Confidence 699999999999999864
No 109
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=43.60 E-value=1.4e+02 Score=24.81 Aligned_cols=89 Identities=17% Similarity=0.173 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHHHHHhhc--------CCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHH
Q psy740 573 DASKLSTQLDETENWLYEE--------GADVNKSVYISKLDELKAIGEKIRQRKVDYEEKTKAFENIFCSIQIAQKKISM 644 (763)
Q Consensus 573 er~~l~~~l~e~~~WL~~~--------g~~a~~~~~~~kl~eL~~~~~pi~~R~~E~~~rp~a~~~l~~~l~~~~~~l~~ 644 (763)
+...|...+++..+||.+- ....+...+...+...+.+...|..+-.. +......+..++..
T Consensus 3 ~L~~F~~~l~el~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~~~----------v~~~~~~g~~L~~~ 72 (119)
T 3uun_A 3 NLDRYQTALEEVLSWLLSAEDTLQAQGEISNDVEVVKDQFHTHEGYMMDLTAHQGR----------VGNILQLGSKLIGT 72 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSCCSSHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHhHHH----------HHHHHHHHHHHHHc
Confidence 3567788888888888641 12345677777777777776666544222 22333333443322
Q ss_pred hhcCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q psy740 645 FKEGDERLNHLDAAEITVVEEKVANALKWAENAQS 679 (763)
Q Consensus 645 ~~~~~~~~~~~t~~e~~~l~~~~~e~~~Wl~~~~~ 679 (763)
.|++.++...|...++....-|+....
T Consensus 73 --------~~~~~~~~~~i~~~l~~l~~rw~~L~~ 99 (119)
T 3uun_A 73 --------GKLSEDEETEVQEQMNLLNSRWECLRV 99 (119)
T ss_dssp --------TCSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------CCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566666666666666555555433
No 110
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=42.90 E-value=12 Score=41.48 Aligned_cols=21 Identities=24% Similarity=0.153 Sum_probs=17.9
Q ss_pred cceEEEEcCccceEEEEEECC
Q psy740 4 MSVIGIDFGNESCFIAAARAG 24 (763)
Q Consensus 4 ~~viGID~GTt~s~va~~~~g 24 (763)
..++|||+|||++++++++..
T Consensus 2 ~~~lgiDiGtts~k~~l~d~~ 22 (504)
T 2d4w_A 2 DYVLAIDQGTTSSRAIVFDHS 22 (504)
T ss_dssp CEEEEEEECSSEEEEEEECTT
T ss_pred CEEEEEecCCcceEEEEECCC
Confidence 358999999999999998743
No 111
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=41.32 E-value=14 Score=37.94 Aligned_cols=21 Identities=24% Similarity=0.433 Sum_probs=18.5
Q ss_pred cceEEEEcCccceEEEEEECC
Q psy740 4 MSVIGIDFGNESCFIAAARAG 24 (763)
Q Consensus 4 ~~viGID~GTt~s~va~~~~g 24 (763)
|.++|||+|.|++.+++++.+
T Consensus 1 M~~lgiDiGgt~i~~~l~d~~ 21 (302)
T 3vov_A 1 MKVVGLDLGGTKIAAGVFDGK 21 (302)
T ss_dssp CCEEEEEECSSEEEEEEECSS
T ss_pred CEEEEEEEcCCEEEEEEEeCC
Confidence 579999999999999998754
No 112
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=40.60 E-value=49 Score=33.89 Aligned_cols=46 Identities=15% Similarity=0.077 Sum_probs=31.3
Q ss_pred ccEEEEecCCCCc-HHHHHHHHHhcC----------CCCCCCCChhHHHHhHHHHHc
Q psy740 278 IHSVEIVGGSSRI-PAIKGLIEKIFQ----------KTPSTTLNQDEAVARGCALQC 323 (763)
Q Consensus 278 i~~V~lvGGssri-P~v~~~l~~~fg----------~~~~~~~n~deaVa~GAa~~a 323 (763)
.+.|+|-||.++. +.+.+.|++.+. ..+..+...+.+.++|||..+
T Consensus 261 P~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~ 317 (321)
T 3r8e_A 261 LNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLI 317 (321)
T ss_dssp CCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHH
T ss_pred CCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHH
Confidence 5789999998876 555555544431 124445566789999999876
No 113
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=40.28 E-value=27 Score=35.77 Aligned_cols=47 Identities=15% Similarity=0.080 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcCCC
Q psy740 255 DVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQKT 304 (763)
Q Consensus 255 ~l~~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg~~ 304 (763)
-....+...++++|++++++++||+.|+.-|+++++ -+.+.+.||..
T Consensus 217 ~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~~ 263 (322)
T 1ub7_A 217 FAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRI---IDAARERLGLP 263 (322)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCCC
Confidence 345677788999999999999999999999998765 35678888753
No 114
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=39.83 E-value=30 Score=35.19 Aligned_cols=47 Identities=15% Similarity=0.189 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcCCC
Q psy740 255 DVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQKT 304 (763)
Q Consensus 255 ~l~~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg~~ 304 (763)
.....+...++++|++++++++||+.|++-|+++++ -+.+.+.||..
T Consensus 207 ~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~~~~~~~lg~~ 253 (309)
T 2ebd_A 207 VAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRI---INALAEKLNIP 253 (309)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhCCC
Confidence 345567788999999999999999999999998875 34677888753
No 115
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=39.58 E-value=17 Score=36.86 Aligned_cols=68 Identities=10% Similarity=-0.051 Sum_probs=42.9
Q ss_pred HHhHHHHHHHHHHHHHHHHHcCCCCC-CccEEEEecCCCCc--HHHHHHHHHhcCCCCCCCCChhHHHHhHHHHHcch
Q psy740 251 ELCKDVFENVEKTLKDCLEKSKLALS-DIHSVEIVGGSSRI--PAIKGLIEKIFQKTPSTTLNQDEAVARGCALQCAM 325 (763)
Q Consensus 251 ~l~~~l~~~i~~~i~~~l~~a~~~~~-~i~~V~lvGGssri--P~v~~~l~~~fg~~~~~~~n~deaVa~GAa~~aa~ 325 (763)
.++..++++....+-..+ . +..- +.+.|+|.||-++. +.+++.+.+.. .+ ...+..+...||+.+|..
T Consensus 210 ~~A~~i~~~~~~~La~~i-~--~~~~~~p~~vvlgGGv~~~~~~~l~~~l~~~~-~~---i~~~~~a~~~GA~~la~~ 280 (291)
T 1zbs_A 210 PAVYSLVQNSFDDFLVRN-V--LRYNRPDLPLHFIGSVAFHYREVLSSVIKKRG-LT---LGSVLQSPMEGLIQYHHN 280 (291)
T ss_dssp HHHHHHHHHHHHHHHHHH-T--GGGCCTTSCEEEESHHHHHTHHHHHHHHHHTT-CC---EEEEESCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-h--cccCCCCceEEEECchHHhhHHHHHHHHHHcC-Ce---ecccCcCHHHHHHHHHHh
Confidence 345556666666666666 2 2222 56789999998776 66666666542 11 123557889999998743
No 116
>2ra1_A Surface layer protein; triple coiled-coil, S-layer protein, protein binding, sugar protein; 2.41A {Geobacillus stearothermophilus}
Probab=39.10 E-value=38 Score=35.44 Aligned_cols=124 Identities=13% Similarity=0.135 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHH----HHHHHhhcCCcc
Q psy740 576 KLSTQLDETENWLYEEGADVNKSVYISKLDELKAIGEKIRQRKVDYEEKTKAFENIFCSIQIAQ----KKISMFKEGDER 651 (763)
Q Consensus 576 ~l~~~l~e~~~WL~~~g~~a~~~~~~~kl~eL~~~~~pi~~R~~E~~~rp~a~~~l~~~l~~~~----~~l~~~~~~~~~ 651 (763)
+|..+-.+++.-|.+..-+...+-|..-.-+|++-.- |..|......|...++.|+.--+..+ ..+.-+-..++-
T Consensus 102 kl~~~~~eL~~ai~~~dl~~a~~~YHklsyeikk~av-ll~RVYG~stRe~il~~fk~pA~~l~~~~~y~Itv~~~~~~~ 180 (412)
T 2ra1_A 102 KLDKMRQELKAAVDAKDLKKAEELYHKISYELKTRTV-ILDRVYGQSTRELLRSTFKADAQALRDRLIYDITVAMKAREA 180 (412)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTH-HHHTSSCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccHHHHHHHhhhhhHhhhhcEE-EEecccChhHHHHHHHHhhchHHHHHHHhhhHHHHHHHHHHH
Confidence 3444444444445432222245667766777877776 88999999999999999886332222 222111111111
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHhhhhhh
Q psy740 652 LNHLDAAEITVVEEKVANALKWAENAQSLMNEFTDRTKDAPVPTSEIKNEMQNLNNAVNPVF 713 (763)
Q Consensus 652 ~~~~t~~e~~~l~~~~~e~~~Wl~~~~~~q~~~~~~~~dP~~~~~di~~k~~~l~~~~~~l~ 713 (763)
-..+...++......+++...||......+.. +|....+.....+...+
T Consensus 181 ~~a~~~g~l~~a~~~l~~v~~~l~kv~d~Fka-------------eL~~aa~~a~~aYeaa~ 229 (412)
T 2ra1_A 181 QDAVKAGNLDKAKAALDQVNQYVSKVTDAFKA-------------ELQKAAQDAKAAYEAAL 229 (412)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHGGGCCSTTHH-------------HHHHHHHHHHHHHHHHS
T ss_pred HHHhccCcHHHHHHHHHHHHHHHHhhhHHHHH-------------HHHHhhhhhhhhhcccc
Confidence 12244567778888888888888765555444 99999988877777664
No 117
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=38.64 E-value=68 Score=32.68 Aligned_cols=49 Identities=29% Similarity=0.215 Sum_probs=32.5
Q ss_pred ccEEEEecCCCC-cHHHHHHHHHhcCC----------CCCCCCChhHHHHhHHHHHcchh
Q psy740 278 IHSVEIVGGSSR-IPAIKGLIEKIFQK----------TPSTTLNQDEAVARGCALQCAML 326 (763)
Q Consensus 278 i~~V~lvGGssr-iP~v~~~l~~~fg~----------~~~~~~n~deaVa~GAa~~aa~l 326 (763)
.+.|+|.||.++ .|.+.+.+++.+.. ++..+...+.+.++|||+.+...
T Consensus 263 p~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~~~ 322 (326)
T 2qm1_A 263 PDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLALQF 322 (326)
T ss_dssp CSEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHGGGG
T ss_pred CCEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHHHHh
Confidence 467888888886 57766666665521 12233356778999999887543
No 118
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=37.79 E-value=2.2e+02 Score=30.72 Aligned_cols=50 Identities=4% Similarity=0.113 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHhhh
Q psy740 659 EITVVEEKVANALKWAENAQSLMNEFTDRTKDAPVPTSEIKNEMQNLNNAVN 710 (763)
Q Consensus 659 e~~~l~~~~~e~~~Wl~~~~~~q~~~~~~~~dP~~~~~di~~k~~~l~~~~~ 710 (763)
.+-.+...+.+...|++++...-.. ..-.. ....+.-+..|.+.|+.++.
T Consensus 94 ~L~qFl~d~~ee~~Wi~EKe~~~~s-~d~gd-~l~dv~~l~~khq~l~~EL~ 143 (450)
T 3r6n_A 94 QLQNIIQATSREIMWINDCEEEELL-YDWSD-KNTNIAQKQEAFSIRMSQLE 143 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHS-CCCST-TCCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-cccCc-ChhhHHHHHHHHHHHHHHHH
Confidence 4667778889999999999775555 43222 22334455667777766654
No 119
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=37.73 E-value=17 Score=37.60 Aligned_cols=21 Identities=19% Similarity=0.259 Sum_probs=18.3
Q ss_pred cceEEEEcCccceEEEEEECC
Q psy740 4 MSVIGIDFGNESCFIAAARAG 24 (763)
Q Consensus 4 ~~viGID~GTt~s~va~~~~g 24 (763)
+.+||||+|+|++++++++..
T Consensus 2 ~~~lgiDiGgt~i~~~l~d~~ 22 (321)
T 3vgl_A 2 GLTIGVDIGGTKIAAGVVDEE 22 (321)
T ss_dssp CEEEEEEECSSEEEEEEECTT
T ss_pred cEEEEEEECCCEEEEEEECCC
Confidence 578999999999999998743
No 120
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=37.71 E-value=23 Score=37.63 Aligned_cols=48 Identities=15% Similarity=0.114 Sum_probs=33.7
Q ss_pred CccEEEEecCCCCcHH-HHHHHHHhcCC----CCCCCCChhHHHHhHHHHHcc
Q psy740 277 DIHSVEIVGGSSRIPA-IKGLIEKIFQK----TPSTTLNQDEAVARGCALQCA 324 (763)
Q Consensus 277 ~i~~V~lvGGssriP~-v~~~l~~~fg~----~~~~~~n~deaVa~GAa~~aa 324 (763)
+++.|+|.||.+..+. +.+.|.+.+.. .+..+...+.+.++|||..+.
T Consensus 295 ~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~~ 347 (381)
T 1saz_A 295 EVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVLR 347 (381)
T ss_dssp CCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHHc
Confidence 5789999999987544 77777777642 223344455799999998764
No 121
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=35.64 E-value=64 Score=33.17 Aligned_cols=46 Identities=26% Similarity=0.219 Sum_probs=31.9
Q ss_pred ccEEEEecCCCCcHHHHHHHHHhcCCC---------CCCCCChhHHHHhHHHHHc
Q psy740 278 IHSVEIVGGSSRIPAIKGLIEKIFQKT---------PSTTLNQDEAVARGCALQC 323 (763)
Q Consensus 278 i~~V~lvGGssriP~v~~~l~~~fg~~---------~~~~~n~deaVa~GAa~~a 323 (763)
.+.|+|-||.+..+.+.+.|++.+... +..+.-.+.+.++|||+.+
T Consensus 270 p~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 270 PHVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLN 324 (327)
T ss_dssp CSEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTT
T ss_pred CCEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHH
Confidence 568888888888777777776655211 2223345789999999865
No 122
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens}
Probab=34.87 E-value=2.9e+02 Score=25.94 Aligned_cols=49 Identities=12% Similarity=0.162 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHhh
Q psy740 659 EITVVEEKVANALKWAENAQSLMNEFTDRTKDAPVPTSEIKNEMQNLNNAV 709 (763)
Q Consensus 659 e~~~l~~~~~e~~~Wl~~~~~~q~~~~~~~~dP~~~~~di~~k~~~l~~~~ 709 (763)
.+-.+...+.+...|++++...-.. .... ++.-.+.-+..|...|+..+
T Consensus 106 ~L~~f~~~~~~~~~Wl~eke~~~~s-~d~g-~~~~~v~~l~~k~~~f~~el 154 (210)
T 3pdy_A 106 SLHSFVAAATKELMWLNEKEEEEVG-FDWS-DRNTNMTAKKESYSALMREL 154 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-SCCS-TTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHc-cccC-CCchhHHHHHHHHHHHHHHH
Confidence 4556677788889999998775555 3322 33344555555555544443
No 123
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=34.66 E-value=18 Score=36.94 Aligned_cols=20 Identities=25% Similarity=0.313 Sum_probs=17.7
Q ss_pred ceEEEEcCccceEEEEEECC
Q psy740 5 SVIGIDFGNESCFIAAARAG 24 (763)
Q Consensus 5 ~viGID~GTt~s~va~~~~g 24 (763)
.+||||+|.|++++++++..
T Consensus 12 ~~lGiDiGgT~i~~~l~d~~ 31 (305)
T 1zc6_A 12 YLIGVDGGGTGTRIRLHASD 31 (305)
T ss_dssp EEEEEEECSSCEEEEEEETT
T ss_pred EEEEEEcCccceEEEEEcCC
Confidence 68999999999999999743
No 124
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=34.31 E-value=21 Score=36.39 Aligned_cols=47 Identities=15% Similarity=0.181 Sum_probs=33.9
Q ss_pred ccEEEEecCCCCcHHHHHHHHHhcCC------CCCCCCChhHHHHhHHHHHcc
Q psy740 278 IHSVEIVGGSSRIPAIKGLIEKIFQK------TPSTTLNQDEAVARGCALQCA 324 (763)
Q Consensus 278 i~~V~lvGGssriP~v~~~l~~~fg~------~~~~~~n~deaVa~GAa~~aa 324 (763)
.+.|+|-||.++.|.+.+.|++.+.. .+..+...+.+.++|||..+.
T Consensus 238 p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~ 290 (297)
T 4htl_A 238 PTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFL 290 (297)
T ss_dssp CSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHH
Confidence 57899999988877777777776632 123344567799999998764
No 125
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=34.10 E-value=17 Score=37.00 Aligned_cols=68 Identities=9% Similarity=0.008 Sum_probs=39.6
Q ss_pred HhHHHHHHHHHHHHHHHHHcCCCCC-CccEEEEecCCCCcHHHHHHHHHhcCCCCCCCCChhHHHHhHHHHHcc
Q psy740 252 LCKDVFENVEKTLKDCLEKSKLALS-DIHSVEIVGGSSRIPAIKGLIEKIFQKTPSTTLNQDEAVARGCALQCA 324 (763)
Q Consensus 252 l~~~l~~~i~~~i~~~l~~a~~~~~-~i~~V~lvGGssriP~v~~~l~~~fg~~~~~~~n~deaVa~GAa~~aa 324 (763)
++..++++....+-..+ . +..- +.+.|+|.||-+.. +.+.|++.+......-..+..+.++|||++|.
T Consensus 209 ~A~~i~~~~~~~La~~i-~--~~~~~~p~~vvlgGGv~~~--l~~~l~~~l~~~~~~i~~~~~a~~~GAa~la~ 277 (291)
T 1zxo_A 209 AIRQLVMNSFIAFFRRN-V--MQYDYKQYPVHFIGSIAYC--YKEILQDAARQTGIQIGKILQSPMEGLIQYHS 277 (291)
T ss_dssp TTTHHHHHHHHHHHTTT-G--GGSCTTTSCEEECSHHHHH--THHHHHHHTTTTTCCEEEECSCTHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHHHH-h--cccCCCCceEEEECcHHHH--HHHHHHHHHhcCCcEEeecCCCHHHHHHHHHH
Confidence 34455666655555555 2 2222 56678888887765 55666666643211111345678899998763
No 126
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=33.91 E-value=25 Score=35.35 Aligned_cols=72 Identities=10% Similarity=0.123 Sum_probs=39.8
Q ss_pred eeHHHHHHHhHHHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcCCCCCCCCChhHHHHhHHHHHc
Q psy740 244 MCRSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQKTPSTTLNQDEAVARGCALQC 323 (763)
Q Consensus 244 itr~~fe~l~~~l~~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg~~~~~~~n~deaVa~GAa~~a 323 (763)
+-++.-+.+-..++--+...|+..+++..-....--.|+++||.++ .|...+.. ...++|+ -+-.|..+.+
T Consensus 180 ~g~nT~~ai~sGi~~g~~g~i~~~i~~~~~e~~~~~~vi~TGG~a~------~l~~~~~~--~~~~~~~-LvL~GL~~i~ 250 (268)
T 2h3g_X 180 VGKNTVSAMQSGILYGYVGQVEGIVKRMKEEAKQEPKVIATGGLAK------LISEESNV--IDVVDPF-LTLKGLYMLY 250 (268)
T ss_dssp SCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCEEEEESTTHH------HHHHHCSS--CSEECTT-HHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCCHH------HHHhhCCC--CCEECcc-hHHHHHHHHH
Confidence 5566777777666666666666555433211111247999999863 33444422 2234554 5667877655
Q ss_pred c
Q psy740 324 A 324 (763)
Q Consensus 324 a 324 (763)
.
T Consensus 251 ~ 251 (268)
T 2h3g_X 251 E 251 (268)
T ss_dssp H
T ss_pred H
Confidence 3
No 127
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=33.85 E-value=43 Score=34.60 Aligned_cols=46 Identities=15% Similarity=0.195 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcCCC
Q psy740 256 VFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQKT 304 (763)
Q Consensus 256 l~~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg~~ 304 (763)
....+...|+++|++++++++||+.|+.-|+++++ -+.+.+.||.+
T Consensus 229 ~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg~~ 274 (339)
T 1mzj_A 229 AVADVVPAAREALEVAGLTVGDLVAFVPHQANLRI---IDVLVDRLGVP 274 (339)
T ss_dssp HHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHHH---HHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHhCCC
Confidence 44677788999999999999999999999998764 34677788753
No 128
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=33.29 E-value=28 Score=35.09 Aligned_cols=22 Identities=18% Similarity=0.188 Sum_probs=18.7
Q ss_pred cceEEEEcCccceEEEEEE-CCc
Q psy740 4 MSVIGIDFGNESCFIAAAR-AGG 25 (763)
Q Consensus 4 ~~viGID~GTt~s~va~~~-~g~ 25 (763)
+..+.||.|+||+++++++ ++.
T Consensus 23 ~M~L~IDiGNT~ik~g~~~~~~~ 45 (271)
T 2f9w_A 23 SMILELDCGNSLIKWRVIEGAAR 45 (271)
T ss_dssp CEEEEEEECSSCEEEEEEETTTE
T ss_pred CcEEEEEeCCCeeEEEEEeCCCE
Confidence 3479999999999999998 553
No 129
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=33.16 E-value=43 Score=34.03 Aligned_cols=47 Identities=15% Similarity=0.052 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcCCC
Q psy740 255 DVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQKT 304 (763)
Q Consensus 255 ~l~~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg~~ 304 (763)
.....+...++++|++++++++||+.|++-|+++++- +.+.+.||..
T Consensus 209 ~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~~---d~~~~~lg~~ 255 (313)
T 1zow_A 209 FAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRIM---ESARERLGIS 255 (313)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHHH---HHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHH---HHHHHHhCCC
Confidence 3456777889999999999999999999999987643 4567777743
No 130
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus}
Probab=33.11 E-value=2.3e+02 Score=27.01 Aligned_cols=25 Identities=12% Similarity=0.234 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhc
Q psy740 659 EITVVEEKVANALKWAENAQSLMNE 683 (763)
Q Consensus 659 e~~~l~~~~~e~~~Wl~~~~~~q~~ 683 (763)
.+..+...+++...|++++...-..
T Consensus 121 ~l~~F~~~~~~~~~Wi~eke~~~~s 145 (224)
T 2iak_A 121 TLHNFVTRATNELIWLNEKEESEVA 145 (224)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5667777888889999998875444
No 131
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=32.94 E-value=55 Score=33.10 Aligned_cols=21 Identities=14% Similarity=0.302 Sum_probs=18.2
Q ss_pred CcceEEEEcCccceEEEEEEC
Q psy740 3 GMSVIGIDFGNESCFIAAARA 23 (763)
Q Consensus 3 ~~~viGID~GTt~s~va~~~~ 23 (763)
.|.++|||+|.|++.+++++.
T Consensus 3 ~m~~lgiDiGgt~i~~~l~d~ 23 (297)
T 4htl_A 3 AMKIAAFDIGGTALKMGVVLP 23 (297)
T ss_dssp -CCEEEEEECSSEEEEEEECT
T ss_pred ccEEEEEEeCCCeEEEEEECC
Confidence 468999999999999999864
No 132
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=32.44 E-value=24 Score=36.52 Aligned_cols=20 Identities=15% Similarity=0.082 Sum_probs=17.7
Q ss_pred CcceEEEEcCccceEEEEEE
Q psy740 3 GMSVIGIDFGNESCFIAAAR 22 (763)
Q Consensus 3 ~~~viGID~GTt~s~va~~~ 22 (763)
+..+||||+|.|++.+++++
T Consensus 13 ~~~~lgiDiGGT~i~~~l~d 32 (332)
T 1sz2_A 13 TKYALVGDVGGTNARLALCD 32 (332)
T ss_dssp -CEEEEEEEETTEEEEEEEE
T ss_pred CCEEEEEEechhheEEEEEE
Confidence 45789999999999999997
No 133
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=32.31 E-value=2e+02 Score=28.70 Aligned_cols=21 Identities=19% Similarity=0.237 Sum_probs=10.6
Q ss_pred HHHHHhhhhHHHHHHHHHHcc
Q psy740 540 ERIDARNCLEEYVYDLRNKLG 560 (763)
Q Consensus 540 ~~~ea~N~LEs~iy~~R~~L~ 560 (763)
..++.+..|..|.-++|.++.
T Consensus 67 ~~eelr~kL~p~~~el~~~l~ 87 (273)
T 3s84_A 67 QAEQLRRQLTPYAQRMERVLR 87 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHH
Confidence 344455555555555555543
No 134
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=32.20 E-value=69 Score=32.10 Aligned_cols=48 Identities=13% Similarity=0.097 Sum_probs=30.5
Q ss_pred ccEEEEecCCCCcHHHHHHHHHhcC------------CCCCCCCChhHHHHhHHHHHcch
Q psy740 278 IHSVEIVGGSSRIPAIKGLIEKIFQ------------KTPSTTLNQDEAVARGCALQCAM 325 (763)
Q Consensus 278 i~~V~lvGGssriP~v~~~l~~~fg------------~~~~~~~n~deaVa~GAa~~aa~ 325 (763)
.+.|+|-||.+..|.+.+.|++.+. .++..+.-.+.+.++|||..+..
T Consensus 228 p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~~ 287 (292)
T 2gup_A 228 PGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWLQ 287 (292)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHHH
T ss_pred CCEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHHH
Confidence 4678888888766666666555431 11222334567899999987643
No 135
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=31.52 E-value=26 Score=35.25 Aligned_cols=46 Identities=17% Similarity=0.162 Sum_probs=31.1
Q ss_pred ccEEEEecCCCCcHHHHHHHHHhcCCC-------CCCCCChhHHHHhHHHHHc
Q psy740 278 IHSVEIVGGSSRIPAIKGLIEKIFQKT-------PSTTLNQDEAVARGCALQC 323 (763)
Q Consensus 278 i~~V~lvGGssriP~v~~~l~~~fg~~-------~~~~~n~deaVa~GAa~~a 323 (763)
.+.|+|.||.+..+.+.+.|++.+... +..+...+.+.++|||+.+
T Consensus 234 p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 234 CQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp CSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHH
Confidence 457888888776677777777766321 2223345678999999875
No 136
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=31.46 E-value=46 Score=34.26 Aligned_cols=46 Identities=13% Similarity=0.257 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcCCC
Q psy740 256 VFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQKT 304 (763)
Q Consensus 256 l~~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg~~ 304 (763)
....+...++++|++++++++||+.|++-++++++ -+.+.+.||.+
T Consensus 222 ~~~~~~~~i~~aL~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~~ 267 (331)
T 2x3e_A 222 AVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTRI---LAAVADQLDLP 267 (331)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHH---HHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCCC
Confidence 34667788999999999999999999999998765 34577778753
No 137
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=31.21 E-value=83 Score=26.38 Aligned_cols=25 Identities=16% Similarity=0.391 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhc
Q psy740 659 EITVVEEKVANALKWAENAQSLMNE 683 (763)
Q Consensus 659 e~~~l~~~~~e~~~Wl~~~~~~q~~ 683 (763)
++....+.+++...||.+.......
T Consensus 3 ~L~~f~~~l~el~~WL~e~e~~l~~ 27 (118)
T 3uul_A 3 DLDSYQIALEEVLTWLLSAEDTFQE 27 (118)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3455566666666777665544433
No 138
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=31.15 E-value=36 Score=36.10 Aligned_cols=21 Identities=14% Similarity=0.232 Sum_probs=19.0
Q ss_pred cceEEEEcCccceEEEEEECC
Q psy740 4 MSVIGIDFGNESCFIAAARAG 24 (763)
Q Consensus 4 ~~viGID~GTt~s~va~~~~g 24 (763)
+.++|||+|.|++++++++.+
T Consensus 2 ~~vlgidiGgt~ik~al~d~~ 22 (381)
T 1saz_A 2 FRILTINPGSTSTKLSIFEDE 22 (381)
T ss_dssp CEEEEEEECSSEEEEEEEETT
T ss_pred CeEEEEECCccceeEEEEecc
Confidence 579999999999999999865
No 139
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=29.96 E-value=28 Score=36.72 Aligned_cols=21 Identities=19% Similarity=0.096 Sum_probs=18.6
Q ss_pred CcceEEEEcCccceEEEEEEC
Q psy740 3 GMSVIGIDFGNESCFIAAARA 23 (763)
Q Consensus 3 ~~~viGID~GTt~s~va~~~~ 23 (763)
++.+||||+|.|++.+++++.
T Consensus 28 ~~~~lgiDiGgt~i~~~l~d~ 48 (373)
T 2q2r_A 28 APLTFVGDVGGTSARMGFVRE 48 (373)
T ss_dssp SCEEEEEEECSSEEEEEEEEE
T ss_pred CCeEEEEEEccccEEEEEEec
Confidence 467899999999999999874
No 140
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=29.25 E-value=31 Score=34.37 Aligned_cols=20 Identities=25% Similarity=0.310 Sum_probs=17.9
Q ss_pred cceEEEEcCccceEEEEEEC
Q psy740 4 MSVIGIDFGNESCFIAAARA 23 (763)
Q Consensus 4 ~~viGID~GTt~s~va~~~~ 23 (763)
|.++|||+|.|++.+++++-
T Consensus 12 ~~~lgidiggt~i~~~l~dl 31 (267)
T 1woq_A 12 APLIGIDIGGTGIKGGIVDL 31 (267)
T ss_dssp CCEEEEEECSSEEEEEEEET
T ss_pred CEEEEEEECCCEEEEEEEEC
Confidence 57899999999999999873
No 141
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=28.94 E-value=29 Score=35.47 Aligned_cols=22 Identities=23% Similarity=0.306 Sum_probs=18.5
Q ss_pred CcceEEEEcCccceEEEEEECC
Q psy740 3 GMSVIGIDFGNESCFIAAARAG 24 (763)
Q Consensus 3 ~~~viGID~GTt~s~va~~~~g 24 (763)
.+.++|||+|.|++++++++..
T Consensus 2 ~~~~lgiDiGgt~i~~~l~d~~ 23 (302)
T 3epq_A 2 NAMLGGIEAGGTXFVCAVGRED 23 (302)
T ss_dssp -CCEEEEEECSSEEEEEEECTT
T ss_pred CcEEEEEEECcceeEEEEEECC
Confidence 4678999999999999998743
No 142
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=28.85 E-value=26 Score=35.41 Aligned_cols=20 Identities=25% Similarity=0.385 Sum_probs=17.6
Q ss_pred cceEEEEcCccceEEEEEEC
Q psy740 4 MSVIGIDFGNESCFIAAARA 23 (763)
Q Consensus 4 ~~viGID~GTt~s~va~~~~ 23 (763)
|.++|||+|.|++.+++++.
T Consensus 4 m~~lgidiggt~i~~~l~d~ 23 (292)
T 2gup_A 4 MTIATIDIGGTGIKFASLTP 23 (292)
T ss_dssp CCEEEEEEETTEEEEEEECT
T ss_pred cEEEEEEECCCEEEEEEECC
Confidence 46999999999999999863
No 143
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=28.15 E-value=2.5e+02 Score=23.14 Aligned_cols=88 Identities=10% Similarity=0.109 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHHHhhc--------CCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHh
Q psy740 574 ASKLSTQLDETENWLYEE--------GADVNKSVYISKLDELKAIGEKIRQRKVDYEEKTKAFENIFCSIQIAQKKISMF 645 (763)
Q Consensus 574 r~~l~~~l~e~~~WL~~~--------g~~a~~~~~~~kl~eL~~~~~pi~~R~~E~~~rp~a~~~l~~~l~~~~~~l~~~ 645 (763)
...|...++++..||.+- ....+...+...+...+.+...|..+-.. +......+..++.
T Consensus 4 L~~f~~~l~el~~WL~e~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~~~----------v~~v~~~g~~L~~-- 71 (118)
T 3uul_A 4 LDSYQIALEEVLTWLLSAEDTFQEQDDISDDVEDVKEQFATHETFMMELSAHQSS----------VGSVLQAGNQLMT-- 71 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHH--
Confidence 456777888888888631 12346677777777777777666544222 1223333344432
Q ss_pred hcCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q psy740 646 KEGDERLNHLDAAEITVVEEKVANALKWAENAQS 679 (763)
Q Consensus 646 ~~~~~~~~~~t~~e~~~l~~~~~e~~~Wl~~~~~ 679 (763)
..|++.++...|...++....-|+....
T Consensus 72 ------~~~~~~~~~~~i~~~l~~l~~rw~~L~~ 99 (118)
T 3uul_A 72 ------QGTLSDEEEFEIQEQMTLLNARWEALRV 99 (118)
T ss_dssp ------TTCSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ------hCCCChhHHHHHHHHHHHHHHHHHHHHH
Confidence 1355667777777777766555555443
No 144
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=28.11 E-value=1.1e+02 Score=31.28 Aligned_cols=46 Identities=13% Similarity=0.024 Sum_probs=29.1
Q ss_pred ccEEEEecCCCCc-HHH----HHHHHHhcC-----C--CCCCCCChhHHHHhHHHHHc
Q psy740 278 IHSVEIVGGSSRI-PAI----KGLIEKIFQ-----K--TPSTTLNQDEAVARGCALQC 323 (763)
Q Consensus 278 i~~V~lvGGssri-P~v----~~~l~~~fg-----~--~~~~~~n~deaVa~GAa~~a 323 (763)
.+.|+|-||.++. +++ ++.+.+... . ++..+...+.+.++|||..+
T Consensus 253 p~~IvlgGgi~~~~~~l~~~l~~~l~~~~~~~~~~~~~~i~~s~l~~~a~l~GAa~l~ 310 (321)
T 3vgl_A 253 PSAFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLGGKAGLVGAADLA 310 (321)
T ss_dssp CSEEEEESGGGGGTHHHHHHHHHHHHHHCTTGGGSCCCEEEECTTGGGHHHHHHHHHH
T ss_pred CCEEEEeChhhcchHHHHHHHHHHHHHhcccccccCCCEEEECCCCCcHHHHHHHHHH
Confidence 4678888888875 444 444443321 1 23334457889999999776
No 145
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=28.06 E-value=85 Score=31.77 Aligned_cols=47 Identities=19% Similarity=0.093 Sum_probs=29.3
Q ss_pred ccEEEEecCCC-Cc-HHHHHHHHHhc----C----CCCCCCCChhHHHHhHHHHHcc
Q psy740 278 IHSVEIVGGSS-RI-PAIKGLIEKIF----Q----KTPSTTLNQDEAVARGCALQCA 324 (763)
Q Consensus 278 i~~V~lvGGss-ri-P~v~~~l~~~f----g----~~~~~~~n~deaVa~GAa~~aa 324 (763)
.+.|+|-||.+ +. |.+.+.|++.+ . ..+..+.-.+.+.++|||..+-
T Consensus 238 p~~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~~ 294 (302)
T 3vov_A 238 PGVVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLGAALTAY 294 (302)
T ss_dssp CSEEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGGHHHHHHHHHHH
T ss_pred CCEEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCcHHHHHHHHHHH
Confidence 56788888877 54 54544444433 1 1233344567899999998763
No 146
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=27.93 E-value=47 Score=33.32 Aligned_cols=19 Identities=26% Similarity=0.363 Sum_probs=17.1
Q ss_pred cceEEEEcCccceEEEEEE
Q psy740 4 MSVIGIDFGNESCFIAAAR 22 (763)
Q Consensus 4 ~~viGID~GTt~s~va~~~ 22 (763)
|.++|||+|.|++.+++++
T Consensus 1 m~~lgidiggt~~~~~l~d 19 (289)
T 2aa4_A 1 MTTLAIDIGGTKLAAALIG 19 (289)
T ss_dssp CCEEEEEECSSEEEEEEEC
T ss_pred CeEEEEEeCCCEEEEEEEC
Confidence 4689999999999999986
No 147
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=27.91 E-value=83 Score=35.61 Aligned_cols=58 Identities=21% Similarity=0.269 Sum_probs=45.1
Q ss_pred cEEEeeHHHHHHHhHHHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHH
Q psy740 240 VKGEMCRSEMEELCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIE 298 (763)
Q Consensus 240 ~~~~itr~~fe~l~~~l~~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~ 298 (763)
-.+.||..+.+++.. --..+..-++-.|+++|+..+||+.|+|.||+...=-+.+++.
T Consensus 498 ~~i~itq~DIr~~ql-AKaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG~~l~~~~a~~ 555 (631)
T 3zyy_X 498 KDIVITEADIQNLIR-AKAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGKYLNIKDAIT 555 (631)
T ss_dssp SCEEEEHHHHHHHHH-HHHHHHHHHHHHHHHTTCCGGGCCEEEEESSSCSEEEHHHHHH
T ss_pred CcEEEeHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccCCHHHHhh
Confidence 347899999987643 2234556677788899999999999999999988777766664
No 148
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=27.27 E-value=36 Score=34.64 Aligned_cols=43 Identities=16% Similarity=0.242 Sum_probs=33.0
Q ss_pred cEEEEecCCCCcHHHHHHHHHhcCCCCCCCCChhHHHHhHHHHHc
Q psy740 279 HSVEIVGGSSRIPAIKGLIEKIFQKTPSTTLNQDEAVARGCALQC 323 (763)
Q Consensus 279 ~~V~lvGGssriP~v~~~l~~~fg~~~~~~~n~deaVa~GAa~~a 323 (763)
..|.|||........+..|.. +|.+. ...++++++..|....+
T Consensus 248 ~~v~LiG~~~L~~~Y~~AL~~-~G~~~-~~~d~~~~~~~GL~~~~ 290 (295)
T 3nuw_A 248 QAISLVAGSSLTSRYQQAFAA-IGREV-SAVAGDTAFQTGIRSIA 290 (295)
T ss_dssp SCEEEEECHHHHHHHHHHHHH-TTCCE-EEEEHHHHHHHHHHHHH
T ss_pred CeEEEEeCHHHHHHHHHHHHH-cCCCc-eecCHHHHHHHHHHHHH
Confidence 579999999999999888864 67643 34589999988876433
No 149
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=26.91 E-value=57 Score=36.96 Aligned_cols=78 Identities=15% Similarity=0.198 Sum_probs=51.0
Q ss_pred CcEEEeecccCCHHHHHHHHHHHh--------------Hh---hhc------------------------------CCCC
Q psy740 141 SDCVLSVPSFYTNAERKALLDAAK--------------II---ASA------------------------------ANPY 173 (763)
Q Consensus 141 ~~~VITVPa~f~~~qR~al~~Aa~--------------vl---~~~------------------------------~d~~ 173 (763)
..++||+|+.++...|+.+.+.+- ++ +.+ ....
T Consensus 222 ~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl~ttGLVVDiG~g~T~VvPV~eG~vl~~ai~rL~ 301 (655)
T 4am6_A 222 YKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGISTSTCVVNIGAAETRIACVDEGTVLEHSAITLD 301 (655)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCCSSCEEEEEECSSCEEEEEEETTEECGGGCEEES
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCCCCceEEEcCCCceEEEEEEeCCEEEhhheeeec
Confidence 369999999999999999988875 11 111 0136
Q ss_pred CchhHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHhccCC
Q psy740 174 LGGRNIDYKLAKHFSQEFKQKYNIEPESNPRAFLRLLTEVEKLKKQMSAN 223 (763)
Q Consensus 174 lGG~d~D~~l~~~~~~~~~~~~~~~~~~~~~~~~rL~~~aek~K~~LS~~ 223 (763)
+||+++|..|.++|..+.-.....++. ... =...++.+|+.++--
T Consensus 302 iGG~dLT~yL~kLL~~rgypy~~~~f~--t~~---e~eiVrdIKEk~CyV 346 (655)
T 4am6_A 302 YGGDDITRLFALFLLQSDFPLQDWKID--SKH---GWLLAERLKKNFTTF 346 (655)
T ss_dssp CCHHHHHHHHHHHHHHTTCSCCSCCTT--SHH---HHHHHHHHHHHHCCC
T ss_pred chHHHHHHHHHHHHHHcCCCccccCCC--Ccc---hHHHHHHHHHheEEE
Confidence 999999999999988652100011111 111 234577889988864
No 150
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=25.99 E-value=33 Score=38.13 Aligned_cols=24 Identities=8% Similarity=0.001 Sum_probs=18.9
Q ss_pred CcEEEeecccCCHHHHHHHHHHHh
Q psy740 141 SDCVLSVPSFYTNAERKALLDAAK 164 (763)
Q Consensus 141 ~~~VITVPa~f~~~qR~al~~Aa~ 164 (763)
..+++-+|..++...-..+.+++.
T Consensus 131 ~~~I~v~~~~i~~~d~a~~in~a~ 154 (607)
T 1nbw_A 131 EGWIVLIDDAVDFLDAVWWLNEAL 154 (607)
T ss_dssp TCEEEEECSSSCHHHHHHHHHHHH
T ss_pred CCEEEECCCccCHHHHHHHHHHHH
Confidence 345555899999999888888876
No 151
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=25.74 E-value=39 Score=34.59 Aligned_cols=20 Identities=30% Similarity=0.508 Sum_probs=17.5
Q ss_pred ceEEEEcCccceEEEEEECC
Q psy740 5 SVIGIDFGNESCFIAAARAG 24 (763)
Q Consensus 5 ~viGID~GTt~s~va~~~~g 24 (763)
.+||||+|+|++.+++++..
T Consensus 7 ~~lgiDiggt~~~~~l~d~~ 26 (326)
T 2qm1_A 7 KIIGIDLGGTTIKFAILTTD 26 (326)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred EEEEEEECCCEEEEEEECCC
Confidence 68999999999999998743
No 152
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=25.61 E-value=32 Score=39.02 Aligned_cols=25 Identities=36% Similarity=0.606 Sum_probs=22.6
Q ss_pred ccEEEEecCCCCcHHHHHHHHHhcC
Q psy740 278 IHSVEIVGGSSRIPAIKGLIEKIFQ 302 (763)
Q Consensus 278 i~~V~lvGGssriP~v~~~l~~~fg 302 (763)
.+.|++|||++.+|.+.-+|.+...
T Consensus 501 y~nilivGggski~g~~~~L~dri~ 525 (655)
T 4am6_A 501 YSNILIVGGSSKIPALDFILTDRIN 525 (655)
T ss_dssp HTCEEEESTTCCCTTHHHHHHHHHH
T ss_pred hhcEEEEcCcccCccHHHHHHHHHH
Confidence 3689999999999999999999874
No 153
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=24.84 E-value=69 Score=32.83 Aligned_cols=45 Identities=16% Similarity=0.109 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcCC
Q psy740 256 VFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQK 303 (763)
Q Consensus 256 l~~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg~ 303 (763)
....+...++++|++++++++||+.|++-++++++- +.+.+.||.
T Consensus 230 ~~~~~~~~i~~al~~agl~~~dId~~~~H~~~~~~~---~~~~~~lg~ 274 (335)
T 1u6e_A 230 AAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRIN---ELLVKNLQL 274 (335)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCHHHH---HHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHH---HHHHHHcCC
Confidence 355777889999999999999999999999987653 346677764
No 154
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=24.74 E-value=79 Score=32.52 Aligned_cols=48 Identities=21% Similarity=0.135 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcCCC
Q psy740 254 KDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQKT 304 (763)
Q Consensus 254 ~~l~~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg~~ 304 (763)
....+.+...++++|++++++++||+.+++-.++.++ -+.+.+.+|.+
T Consensus 230 ~~~~~~~~~~i~~~l~~~gl~~~did~~~~Hq~~~~i---~~~~~~~lgl~ 277 (333)
T 4dfe_A 230 KLAVNVLEKVAVEALEKANLSAEQIDWLIPHQANIRI---MQSTCRKLGLP 277 (333)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHH---HHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhCCC
Confidence 4455777888999999999999999999999888764 46777778754
No 155
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=24.65 E-value=17 Score=36.89 Aligned_cols=19 Identities=21% Similarity=0.193 Sum_probs=17.0
Q ss_pred eEEEEcCccceEEEEEECC
Q psy740 6 VIGIDFGNESCFIAAARAG 24 (763)
Q Consensus 6 viGID~GTt~s~va~~~~g 24 (763)
++|||+|.|+++++++++|
T Consensus 2 ~lgiDiGGT~~~~~l~d~g 20 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAKEG 20 (291)
T ss_dssp EEEEEECSSEEEEEEEETT
T ss_pred EEEEEeCccceEEEEEeCC
Confidence 7999999999999998844
No 156
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=24.09 E-value=1.2e+02 Score=25.35 Aligned_cols=22 Identities=14% Similarity=0.351 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q psy740 659 EITVVEEKVANALKWAENAQSL 680 (763)
Q Consensus 659 e~~~l~~~~~e~~~Wl~~~~~~ 680 (763)
++..+...+++...||.+....
T Consensus 3 ~L~~F~~~l~el~~WL~~~e~~ 24 (119)
T 3uun_A 3 NLDRYQTALEEVLSWLLSAEDT 24 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHH
Confidence 3455556666666666665443
No 157
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=24.02 E-value=1.7e+02 Score=22.80 Aligned_cols=43 Identities=21% Similarity=0.162 Sum_probs=34.5
Q ss_pred HHHHHhhhhchHHHHHHHHHhhhhHHHHHHHHHHccchHHhhccCC
Q psy740 525 TELEGKMIADDKLEKERIDARNCLEEYVYDLRNKLGSEEEFALYIA 570 (763)
Q Consensus 525 ~~~~~~~~~~D~~~~~~~ea~N~LEs~iy~~R~~L~~~~~~~~~~t 570 (763)
..+..+++.+|...++++......|+-|-.+|..|. .|..+++
T Consensus 29 ~~K~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLD---KfrSVl~ 71 (72)
T 3nmd_A 29 QEKIEELRQRDALIDELELELDQKDELIQMLQNELD---KYRSVIR 71 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HTTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhhccCC
Confidence 356667888888999999999999999999998884 5666553
No 158
>1kcf_A Hypothetical 30.2 KD protein C25G10.02 in chromosome I; beta-alpha-beta motif, RUVC resolvase family, hydrolase; 2.30A {Schizosaccharomyces pombe} SCOP: a.140.2.1 c.55.3.7
Probab=23.72 E-value=72 Score=31.74 Aligned_cols=32 Identities=22% Similarity=0.221 Sum_probs=24.3
Q ss_pred cceEEEEcCccceEEEEEECCceeEEcCCCCCccccEEEEee
Q psy740 4 MSVIGIDFGNESCFIAAARAGGIETIANDYSLRATPSCVAFS 45 (763)
Q Consensus 4 ~~viGID~GTt~s~va~~~~g~~~iv~n~~~~r~~PS~V~~~ 45 (763)
.++++||+|+-|...|...++ ....|+++.+.
T Consensus 40 ~sIlSID~GikNlAyc~l~~~----------~~~~p~l~~W~ 71 (258)
T 1kcf_A 40 SRVLGIDLGIKNFSYCFASQN----------EDSKVIIHNWS 71 (258)
T ss_dssp SSEEEEEECSTTEEEEEEEEC----------TTSCEEEEEEE
T ss_pred CcEEEEecCCCceEEEEEccC----------CCCCCeeecce
Confidence 389999999999999987631 22557777775
No 159
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=22.97 E-value=43 Score=36.38 Aligned_cols=74 Identities=15% Similarity=0.105 Sum_probs=39.8
Q ss_pred HHHHhHHHHHHHHHHHHHHHH----HcCCCCCCccEEEEecCCC--CcHHHHHHHHH----hcCC--CCCCCCChhHHHH
Q psy740 249 MEELCKDVFENVEKTLKDCLE----KSKLALSDIHSVEIVGGSS--RIPAIKGLIEK----IFQK--TPSTTLNQDEAVA 316 (763)
Q Consensus 249 fe~l~~~l~~~i~~~i~~~l~----~a~~~~~~i~~V~lvGGss--riP~v~~~l~~----~fg~--~~~~~~n~deaVa 316 (763)
+..+|..++.|...++-..+. ..+. + .-++.+|||- .-|.+++.+++ .++. ++... -++.+..
T Consensus 363 ~~~va~~V~~RaA~lla~~ia~i~~~~~~--~--~~~V~i~Ggv~~~~~~~~~~l~~~l~~~~~~~~~i~~~-l~~dgs~ 437 (451)
T 1bdg_A 363 VRYACEMVVKRAAYLAGAGIACILRRINR--S--EVTVGVDGSLYKFHPKFCERMTDMVDKLKPKNTRFCLR-LSEDGSG 437 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCC--S--EEEEEEESHHHHHCTTHHHHHHHHHHHHSCTTCEEEEE-ECTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCC--C--ceEEEEeCchhcCchhHHHHHHHHHHHHhCCCCcEEEE-ECCCccH
Confidence 345666666666665555543 2221 1 1255566665 34555544444 4432 12122 3677899
Q ss_pred hHHHHHcchhc
Q psy740 317 RGCALQCAMLS 327 (763)
Q Consensus 317 ~GAa~~aa~ls 327 (763)
+|||+.|+.-+
T Consensus 438 iGAAllA~~~~ 448 (451)
T 1bdg_A 438 KGAAAIAASCT 448 (451)
T ss_dssp HHHHHHHTTC-
T ss_pred HHHHHHHHHHh
Confidence 99999887543
No 160
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=22.80 E-value=1.5e+02 Score=30.01 Aligned_cols=47 Identities=19% Similarity=0.272 Sum_probs=31.8
Q ss_pred CccEEEEecCCCCc-----HHHHHHHHHhcCCC-------CCCCCChhHHHHhHHHHHc
Q psy740 277 DIHSVEIVGGSSRI-----PAIKGLIEKIFQKT-------PSTTLNQDEAVARGCALQC 323 (763)
Q Consensus 277 ~i~~V~lvGGssri-----P~v~~~l~~~fg~~-------~~~~~n~deaVa~GAa~~a 323 (763)
+.+.|+|-||.++. +.+++.+++++... +..+.-.+.+.++|||..+
T Consensus 239 dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la 297 (310)
T 3htv_A 239 DPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILA 297 (310)
T ss_dssp CCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHH
T ss_pred CCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHH
Confidence 35788888887765 46777787766311 1222345789999999877
No 161
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=22.65 E-value=45 Score=34.47 Aligned_cols=21 Identities=19% Similarity=0.384 Sum_probs=18.1
Q ss_pred cceEEEEcCccceEEEEEECC
Q psy740 4 MSVIGIDFGNESCFIAAARAG 24 (763)
Q Consensus 4 ~~viGID~GTt~s~va~~~~g 24 (763)
+.+||||+|+|++.+++++..
T Consensus 30 ~~~lgiDiGgt~i~~~l~d~~ 50 (343)
T 2yhw_A 30 LSALAVDLGGTNLRVAIVSMK 50 (343)
T ss_dssp EEEEEEEECSSEEEEEEEETT
T ss_pred cEEEEEEECCCEEEEEEECCC
Confidence 468999999999999998743
No 162
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=22.43 E-value=13 Score=37.78 Aligned_cols=20 Identities=15% Similarity=0.144 Sum_probs=15.7
Q ss_pred eEEEEcCccceEEEEEECCc
Q psy740 6 VIGIDFGNESCFIAAARAGG 25 (763)
Q Consensus 6 viGID~GTt~s~va~~~~g~ 25 (763)
++|||+|.|+++++++++|.
T Consensus 2 ~lgiDiGGT~i~~~l~d~g~ 21 (291)
T 1zxo_A 2 ILIADSGSTKTDWCVVLNGA 21 (291)
T ss_dssp --CEECCTTCEEEEEECSSS
T ss_pred EEEEEeccccEEEEEEcCCe
Confidence 68999999999999987443
No 163
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=22.28 E-value=73 Score=33.68 Aligned_cols=47 Identities=21% Similarity=0.251 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcCCC
Q psy740 255 DVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQKT 304 (763)
Q Consensus 255 ~l~~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg~~ 304 (763)
...+.+...|+++|+++|++++||+.|++-++++++ -+.+.+.+|.+
T Consensus 284 ~~~~~~~~~i~~aL~~agl~~~dId~~~~H~~~~~i---~d~~~~~lgl~ 330 (393)
T 1ted_A 284 YIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKI---IEQSVRSLGIS 330 (393)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSCEEECCSCHHH---HHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHcCCCHhHCCEEEECCCcHHH---HHHHHHHcCCC
Confidence 345667778999999999999999999999988764 34567777754
No 164
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=22.06 E-value=52 Score=35.08 Aligned_cols=45 Identities=16% Similarity=0.249 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEecCCCCc--HHHHHHHHHhcC
Q psy740 258 ENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRI--PAIKGLIEKIFQ 302 (763)
Q Consensus 258 ~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssri--P~v~~~l~~~fg 302 (763)
......++++|++++++++||+.|++-|.+|++ |.--..|.+.||
T Consensus 275 ~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~gD~~E~~al~~~~g 321 (408)
T 1j3n_A 275 KGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFG 321 (408)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHHHHHhc
Confidence 445678999999999999999999999999985 333455566664
No 165
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=21.94 E-value=50 Score=33.97 Aligned_cols=20 Identities=20% Similarity=0.209 Sum_probs=17.2
Q ss_pred cceEEEEcCccceEEEEEEC
Q psy740 4 MSVIGIDFGNESCFIAAARA 23 (763)
Q Consensus 4 ~~viGID~GTt~s~va~~~~ 23 (763)
+.+||||+|.|++.+++++.
T Consensus 24 ~~~lgiDiGgt~i~~~l~d~ 43 (327)
T 4db3_A 24 AMYYGFDVGGTKIEFGAFNE 43 (327)
T ss_dssp CCEEEEEECSSEEEEEEECT
T ss_pred cEEEEEEECCCEEEEEEEeC
Confidence 46899999999999998863
No 166
>3t9o_A DGC, diguanylate cyclase YDEH; putative zinc sensor, CZB domain, metal protein; 2.20A {Escherichia coli}
Probab=21.70 E-value=2e+02 Score=25.20 Aligned_cols=63 Identities=10% Similarity=0.121 Sum_probs=41.1
Q ss_pred HHHHHHhhcCCCC-----CHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHh
Q psy740 583 ETENWLYEEGADV-----NKSVYISKLDELKAIGEKIRQRKVDYEEKTKAFENIFCSIQIAQKKISMF 645 (763)
Q Consensus 583 e~~~WL~~~g~~a-----~~~~~~~kl~eL~~~~~pi~~R~~E~~~rp~a~~~l~~~l~~~~~~l~~~ 645 (763)
..-.|+|..|... ....+.+--..+...+..+...+.+.....+.++.|.++...+...|.++
T Consensus 54 ~lGkWy~~~~~~~~~~~~~f~~l~~~H~~~H~~a~~ii~~~~~g~~~~a~~~~~e~as~~~~~~ld~~ 121 (135)
T 3t9o_A 54 QFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDY 121 (135)
T ss_dssp HHHHHHHTTCSCCTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccHHHHccCcccccccHHHHHHhHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566999776432 23456666777888888888777766655555677766666655555444
No 167
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=21.27 E-value=47 Score=36.15 Aligned_cols=76 Identities=7% Similarity=-0.059 Sum_probs=41.5
Q ss_pred HHHhHHHHHHHHHHHHHHHH----HcCCCCCCccEEEEecCCCCcHHHHHHHHHhc----CCCC----C---CCCChhHH
Q psy740 250 EELCKDVFENVEKTLKDCLE----KSKLALSDIHSVEIVGGSSRIPAIKGLIEKIF----QKTP----S---TTLNQDEA 314 (763)
Q Consensus 250 e~l~~~l~~~i~~~i~~~l~----~a~~~~~~i~~V~lvGGssriP~v~~~l~~~f----g~~~----~---~~~n~dea 314 (763)
..+|.-+..|...++-..+. ..+. . -..|.+-||-...|.+++.+++++ +... . .-.-....
T Consensus 355 ~~ia~~V~~RaA~l~A~~iaai~~~~~~--~-~~~V~vdGsv~~~p~f~~~l~~~l~~l~~~~~~~~~~~~v~~~~~~dg 431 (457)
T 2yhx_A 355 RRXLFLIAAYAFRLVVCXIXAICQKKGY--S-SGHIAAXGSXRSYSGFSXNSATXNXNIYGWPQSAXXSKPIXITPAIDG 431 (457)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHTC--S-SEEEEEESTTTTSTTHHHHHHHHHHHHHCCCCSSGGGSSEEEEECCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCC--C-cEEEEEECCcccCchHHHHHHHHHHHhhCcccccccCcceEEEECCCc
Confidence 35666666666555544433 3332 1 134555555556666776666554 4321 1 12234566
Q ss_pred HHhHHHHHcchhcC
Q psy740 315 VARGCALQCAMLSP 328 (763)
Q Consensus 315 Va~GAa~~aa~ls~ 328 (763)
.-.|||+.||..+.
T Consensus 432 sg~GAAl~aa~~~~ 445 (457)
T 2yhx_A 432 XGAASXVIXSIASA 445 (457)
T ss_dssp TTHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHhh
Confidence 78899998887543
No 168
>3fh3_A Putative ECF-type sigma factor negative effector; putative anti-sigma W factor, MCSG, PSI, structural genomics; HET: MSE; 2.10A {Bacillus anthracis str} PDB: 3fgg_A
Probab=20.91 E-value=3.7e+02 Score=24.25 Aligned_cols=22 Identities=9% Similarity=0.139 Sum_probs=16.9
Q ss_pred CCCCHHHHHHHHHHHHhhhhch
Q psy740 514 HGLSPEQLNAHTELEGKMIADD 535 (763)
Q Consensus 514 ~~ls~~ei~~~~~~~~~~~~~D 535 (763)
..|+.++...+++-+.++....
T Consensus 34 ~~LtkeEFeqfi~LlKe~~~i~ 55 (158)
T 3fh3_A 34 DEMGTKEYEVFTKELKKLTNAK 55 (158)
T ss_dssp GTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHHHHHH
Confidence 4799999999998877765443
No 169
>1wlx_A Alpha-actinin 4; three-helix bundle, protein binding; NMR {Homo sapiens}
Probab=20.72 E-value=2.2e+02 Score=25.01 Aligned_cols=11 Identities=9% Similarity=0.093 Sum_probs=8.6
Q ss_pred ccCCCCHHHHH
Q psy740 651 RLNHLDAAEIT 661 (763)
Q Consensus 651 ~~~~~t~~e~~ 661 (763)
.|.+||-+++.
T Consensus 94 pYT~it~~~l~ 104 (129)
T 1wlx_A 94 PYTTVTPQIIN 104 (129)
T ss_dssp SSCCCCHHHHH
T ss_pred CCccchHHHHH
Confidence 58999977766
No 170
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=20.69 E-value=6.3e+02 Score=25.05 Aligned_cols=23 Identities=9% Similarity=0.008 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Q psy740 659 EITVVEEKVANALKWAENAQSLM 681 (763)
Q Consensus 659 e~~~l~~~~~e~~~Wl~~~~~~q 681 (763)
++..+...++++..|+.++....
T Consensus 218 ~~~~f~~~~~e~~~Wl~ek~~~L 240 (326)
T 3kbt_A 218 DLHRYFYTGAEILGLIDEKHREL 240 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHhhC
Confidence 44566778899999999987643
No 171
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=20.22 E-value=1.1e+02 Score=31.52 Aligned_cols=50 Identities=16% Similarity=0.070 Sum_probs=39.3
Q ss_pred HhHHHHHHHHHHHHHHHHHcCCCCCCccEEEEecCCCCcHHHHHHHHHhcCCC
Q psy740 252 LCKDVFENVEKTLKDCLEKSKLALSDIHSVEIVGGSSRIPAIKGLIEKIFQKT 304 (763)
Q Consensus 252 l~~~l~~~i~~~i~~~l~~a~~~~~~i~~V~lvGGssriP~v~~~l~~~fg~~ 304 (763)
+....+..+...++++|++++++.+||+.+++-.++.++ -+.+.+.+|.+
T Consensus 240 v~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~~i---~~~~~~~lgl~ 289 (345)
T 3s21_A 240 LLIEGIKLAQKTFVAAKQVLGWAVEELDQFVIHQVSRPH---TAAFVKSFGID 289 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECCSCHHH---HHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCHHH---HHHHHHHcCcC
Confidence 344455677788899999999999999999999988664 46777777754
No 172
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=20.17 E-value=1.8e+02 Score=29.32 Aligned_cols=48 Identities=15% Similarity=0.070 Sum_probs=30.9
Q ss_pred CccEEEEecCCCCcH----HHHHHHHHhcCC-------------CCCCCCChhHHHHhHHHHHcc
Q psy740 277 DIHSVEIVGGSSRIP----AIKGLIEKIFQK-------------TPSTTLNQDEAVARGCALQCA 324 (763)
Q Consensus 277 ~i~~V~lvGGssriP----~v~~~l~~~fg~-------------~~~~~~n~deaVa~GAa~~aa 324 (763)
|.+.|+|-||-++.+ .|++.+.+.... .+..+.-.+.|.++|||..+.
T Consensus 224 dPe~IviGGgi~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s~lg~~a~l~GAa~l~~ 288 (302)
T 3epq_A 224 APXXIILGGGVMQQXQVFSYIYQYVPKIMNSYLDFSELSDDISDYIVPPRLGSNAGIIGTLVLAH 288 (302)
T ss_dssp CCSCEEEESSGGGCTHHHHHHHHHHHHHHTTCSCCGGGTTTGGGTEECCTTGGGHHHHHHHHHHH
T ss_pred CchhhhcCchhhhhHHHHHHHHHHHHHHHhhhccCcccccccCceEEECCcCChHHHHHHHHHHH
Confidence 457788888877754 556666655311 122344467899999998763
No 173
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=20.02 E-value=1.4e+02 Score=31.20 Aligned_cols=46 Identities=20% Similarity=0.131 Sum_probs=29.1
Q ss_pred ccEEEEecCCCCc-HHHHHHHHHhcC----C----CCCCCCChhHHHHhHHHHHc
Q psy740 278 IHSVEIVGGSSRI-PAIKGLIEKIFQ----K----TPSTTLNQDEAVARGCALQC 323 (763)
Q Consensus 278 i~~V~lvGGssri-P~v~~~l~~~fg----~----~~~~~~n~deaVa~GAa~~a 323 (763)
.+.|+|-||.++. |.+.+.+++.+. . ++..+...+.+.++|||..+
T Consensus 315 P~~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~GAa~l~ 369 (380)
T 2hoe_A 315 ISKIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAAVHA 369 (380)
T ss_dssp CCEEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHHHHH
T ss_pred CCEEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHHHHHHHH
Confidence 5678888888764 666666655441 1 12223344568999999876
Done!