Query psy7403
Match_columns 368
No_of_seqs 305 out of 2142
Neff 8.5
Searched_HMMs 29240
Date Fri Aug 16 17:22:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7403.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7403hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ab8_A Adenylyl cyclase; lyase 100.0 1.6E-32 5.5E-37 246.4 7.8 190 7-261 2-208 (220)
2 3uvj_A Guanylate cyclase solub 100.0 5.7E-32 2E-36 243.7 4.4 190 8-262 3-196 (225)
3 2wz1_A Guanylate cyclase solub 100.0 1.1E-31 3.9E-36 240.6 3.6 189 8-262 1-200 (219)
4 3et6_A Soluble guanylyl cyclas 100.0 6.1E-31 2.1E-35 230.8 7.8 184 12-260 2-186 (190)
5 1azs_A VC1; complex (lyase/hyd 100.0 1.9E-31 6.4E-36 239.0 3.8 187 9-263 24-214 (220)
6 1yk9_A Adenylate cyclase; beta 100.0 1.4E-31 4.9E-36 237.5 -0.7 186 11-263 2-187 (204)
7 2w01_A Adenylate cyclase; guan 100.0 1.5E-29 5.2E-34 225.2 10.4 185 14-261 9-195 (208)
8 1wc3_A Adenylate cyclase; solu 100.0 4.1E-29 1.4E-33 224.1 8.2 187 9-258 17-212 (219)
9 3r5g_A CYAB; adenylyl cyclase, 100.0 5.7E-29 1.9E-33 219.7 8.8 185 14-260 4-192 (198)
10 1fx2_A Receptor-type adenylate 99.9 4.8E-28 1.6E-32 219.4 8.5 214 9-263 2-220 (235)
11 1y10_A Hypothetical protein RV 99.9 5.9E-28 2E-32 233.6 5.2 178 2-263 186-379 (407)
12 1ybt_A Hydrolase, alpha/beta h 99.9 7.8E-28 2.7E-32 209.9 3.9 170 8-259 6-176 (184)
13 3mr7_A Adenylate/guanylate cyc 99.9 8.7E-26 3E-30 197.8 7.8 169 15-261 3-173 (189)
14 1ab8_A Adenylyl cyclase; lyase 99.9 2.6E-25 8.8E-30 199.5 8.8 156 198-368 15-196 (220)
15 1y10_A Hypothetical protein RV 99.9 2.5E-25 8.5E-30 215.2 6.3 180 165-368 161-364 (407)
16 3uvj_A Guanylate cyclase solub 99.9 5.1E-25 1.7E-29 198.2 6.9 155 196-367 13-178 (225)
17 2wz1_A Guanylate cyclase solub 99.9 1.4E-24 4.8E-29 194.4 7.2 156 196-368 11-187 (219)
18 1yk9_A Adenylate cyclase; beta 99.9 2.4E-24 8.2E-29 190.9 7.9 156 196-368 9-173 (204)
19 3et6_A Soluble guanylyl cyclas 99.9 2.8E-24 9.5E-29 188.3 8.2 157 195-368 7-175 (190)
20 1azs_A VC1; complex (lyase/hyd 99.9 9.2E-24 3.2E-28 189.0 6.7 148 196-360 33-189 (220)
21 2w01_A Adenylate cyclase; guan 99.9 1.9E-23 6.4E-28 185.7 7.2 159 195-368 12-182 (208)
22 3r5g_A CYAB; adenylyl cyclase, 99.9 1.6E-23 5.6E-28 184.6 6.3 161 194-368 6-180 (198)
23 1wc3_A Adenylate cyclase; solu 99.9 1.1E-22 3.8E-27 182.1 6.2 160 194-368 24-202 (219)
24 3mr7_A Adenylate/guanylate cyc 99.9 4.3E-22 1.5E-26 174.3 8.2 152 194-368 4-160 (189)
25 1ybt_A Hydrolase, alpha/beta h 99.8 2.2E-21 7.5E-26 169.0 4.5 143 196-368 16-165 (184)
26 1fx2_A Receptor-type adenylate 99.8 1.1E-20 3.9E-25 170.8 8.8 149 197-368 12-206 (235)
27 3hls_A Guanylate cyclase solub 97.1 0.00024 8.3E-09 49.9 2.6 45 141-189 21-65 (66)
28 2qv6_A MJ0145, GTP cyclohydrol 84.7 2.3 7.8E-05 38.1 7.2 59 16-76 128-187 (268)
29 3i5c_A Fusion of general contr 57.3 15 0.0005 30.4 5.3 58 17-76 59-116 (206)
30 3mtk_A Diguanylate cyclase/pho 46.8 30 0.001 27.9 5.4 57 17-76 34-90 (178)
31 3qyy_A Response regulator; C-D 46.0 22 0.00075 28.2 4.4 56 18-76 41-96 (167)
32 3icl_A EAL/ggdef domain protei 42.6 54 0.0019 25.8 6.4 57 17-76 28-84 (171)
33 3ign_A Diguanylate cyclase; gg 42.2 20 0.0007 28.7 3.7 57 17-76 37-93 (177)
34 3hva_A Protein FIMX; ggdef dig 40.6 28 0.00097 27.7 4.3 57 17-76 42-98 (177)
35 3tek_A Thermodbp-single strand 37.4 18 0.00063 27.8 2.3 48 24-82 76-123 (148)
36 3tvk_A DGC, diguanylate cyclas 33.8 36 0.0012 28.0 3.9 56 18-76 32-87 (179)
37 3bre_A Probable two-component 31.0 59 0.002 29.3 5.3 57 18-76 201-257 (358)
38 3pjx_A Cyclic dimeric GMP bind 26.7 88 0.003 29.3 5.8 58 17-76 46-106 (430)
39 3hvw_A Diguanylate-cyclase (DG 26.2 70 0.0024 25.5 4.4 56 17-76 25-83 (176)
No 1
>1ab8_A Adenylyl cyclase; lyase, complex (transferase-inhibitor); HET: FOK; 2.20A {Rattus norvegicus} SCOP: d.58.29.1 PDB: 1azs_B* 1cjk_B* 1cjt_B* 1cju_B* 1cjv_B* 1cs4_B* 1tl7_B* 1u0h_B* 2gvd_B* 2gvz_B* 3c14_B* 3c15_B* 3c16_B* 3e8a_B* 3g82_B* 3maa_B* 1cul_B*
Probab=99.97 E-value=1.6e-32 Score=246.45 Aligned_cols=190 Identities=26% Similarity=0.424 Sum_probs=141.9
Q ss_pred hcCCcccccccCceEEEeeccCCchhhccCCC----hHHHHHHHHHHHHHHhhhhhcc---cceeEEEEeecceEEEeec
Q psy7403 7 ILGQSVVAETYDSVTIYFSDIVGFTSLSAEST----PLQVVELLNDLYTCFDSVIENF---DVYKVIFVVLSEIYSISLA 79 (368)
Q Consensus 7 ~~g~~~~~~~~~~vtilf~di~gft~ls~~~~----~~~~~~~Ln~~f~~~~~~i~~~---~~~~~~~~~~Gd~~~~~~~ 79 (368)
++|+..+++++++|||||+||+|||.+++.++ |++++.+||++|..|++++.+| +++++|++ ||+||+ +|
T Consensus 2 ~~~~~~~~~~~~~vtvlF~DI~gfT~l~~~l~~~~~p~~~~~~Ln~~~~~~~~~i~~~~~~g~~~ik~i--GD~~ma-~f 78 (220)
T 1ab8_A 2 LKNEELYHQSYDCVCVMFASIPDFKEFYTESDVNKEGLECLRLLNEIIADFDDLLSKPKFSGVEKIKTI--GSTYMA-AT 78 (220)
T ss_dssp -----CCEEEEEEEEEEEEECTTHHHHCCCSTTTTTTHHHHHHHHHHHHHHHGGGGSGGGTTEEEEEEE--TTEEEE-EE
T ss_pred CCCCcccccccCcEEEEEEEccchHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEEe--CceEEE-EE
Confidence 46788999999999999999999999999874 7899999999999999999997 79999999 999999 99
Q ss_pred ccccc----------ccchhhHHHHHHHHhhhhHHHHHHHhhhhhHHHHHhHHHHHHhhcCCCCCCcchHHHHHHHHHHH
Q psy7403 80 ALDYE----------SNNILDNLLSRMEQYANNLEALVEERTADYLEEKRKCEELLYQLLPKDYESNNILDNLLSRMEQY 149 (368)
Q Consensus 80 g~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~e~~ 149 (368)
|+|.. ....|+..++++|+ +|+..+
T Consensus 79 g~p~~~~~~~~~~~~~~~~~a~~a~~~Al------------------------~~~~~l--------------------- 113 (220)
T 1ab8_A 79 GLSAIPSQEHAQEPERQYMHIGTMVEFAY------------------------ALVGKL--------------------- 113 (220)
T ss_dssp CCCCSCCC--------CCHHHHHHHHHHH------------------------HHHHHH---------------------
T ss_pred CCCccccccccccccccHHHHHHHHHHHH------------------------HHHHHH---------------------
Confidence 99873 12356666777776 555555
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHhhhhcCCCCCCCCccccccccccceeEEeccccccchhhhhcccccccccchhHHH
Q psy7403 150 ANNLEALVEERTADYLEEKRKCEELLYQLLPNCYQGPCVAGVVGLKMPRYCLFGDTVNTASRMESNGQALKIHVSPFTKE 229 (368)
Q Consensus 150 ~~~L~~~~~~~t~~l~~e~~~~~~Ll~~i~pgi~~G~v~~G~iG~~~~~~~lfgd~Vnfa~rles~~~~~~I~is~~~~~ 229 (368)
++++.. .... +++++|+|+|++++|++|.+++.|++|||+||+|+||++.++|++|++|+.++.
T Consensus 114 ------------~~~~~~--~~~~--l~~rIGIh~G~v~~G~iG~~r~~y~v~Gd~VN~AaRle~~a~~g~I~vS~~~~~ 177 (220)
T 1ab8_A 114 ------------DAINKH--SFND--FKLRVGINHGPVIAGVIGAQKPQYDIWGNTVNVASRMDSTGVLDKIQVTEETSL 177 (220)
T ss_dssp ------------HHHHTT--TTCC--CCCEEEEEEEEEEEEEECSSSCEEEEESHHHHHHHHHHHTCCTTCEEECHHHHH
T ss_pred ------------HHHhhc--cCCc--eEEEEEEEeeeEEEEeecCCceeEEEECcHHHHHHHHHhcCCCCeEEECHHHHH
Confidence 333221 1123 499999999999999999888889999999999999999999999999999999
Q ss_pred HhhhccchhhhhhccccceeeeeecEEEEEec
Q psy7403 230 VLDTFGTFDLELRGEVEMKVETIGDAYMVVSG 261 (368)
Q Consensus 230 l~~~~~~fd~~~~~~~~~K~ktigd~Y~~~~g 261 (368)
++... .|.+...+...+||+....+|+....
T Consensus 178 ~l~~~-~~~~~~~g~~~lKG~~~~~~~~~~~~ 208 (220)
T 1ab8_A 178 ILQTL-GYTCTCRGIINVKGKGDLKTYFVNTE 208 (220)
T ss_dssp HHHHH-TCCCCC---------------CCC--
T ss_pred HhhcC-ceEEEEeccEEecCCCceEEEEEecc
Confidence 98752 47777778888899988888876543
No 2
>3uvj_A Guanylate cyclase soluble subunit alpha-3; nitric oxide, structural genomics, structural genomics conso SGC, CGMP biosynthesis; 2.08A {Homo sapiens}
Probab=99.97 E-value=5.7e-32 Score=243.67 Aligned_cols=190 Identities=34% Similarity=0.517 Sum_probs=159.3
Q ss_pred cCCcccccccCceEEEeeccCCchhhccCCChHHHHHHHHHHHHHHhhhhhcccceeEEEEeecceEEEeeccccccccc
Q psy7403 8 LGQSVVAETYDSVTIYFSDIVGFTSLSAESTPLQVVELLNDLYTCFDSVIENFDVYKVIFVVLSEIYSISLAALDYESNN 87 (368)
Q Consensus 8 ~g~~~~~~~~~~vtilf~di~gft~ls~~~~~~~~~~~Ln~~f~~~~~~i~~~~~~~~~~~~~Gd~~~~~~~g~~~~~~~ 87 (368)
+|+..+++++++|||||+||+|||.+++.++|++++.+||++|..|++++.+|+|+++|++ ||+||+ +||+|....
T Consensus 3 ~g~~~~~~~~~~vtvlF~Di~gfT~l~~~~~~~~~~~~ln~~~~~~~~~i~~~~g~v~k~~--GD~~ma-~fg~p~~~~- 78 (225)
T 3uvj_A 3 QGQVVQAKKFSNVTMLFSDIVGFTAICSQCSPLQVITMLNALYTRFDQQCGELDVYKVETI--GDAYCV-AGGLHKESD- 78 (225)
T ss_dssp --CEEEEEEEEEEEEEEEEETTHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCEEECCS--TTCEEE-EESSSSCCT-
T ss_pred CCCccCCcccceEEEEEEEccChHHHHhcCCHHHHHHHHHHHHHHHHHHHHhcCeEEEEee--CcEEEE-EECCCCCch-
Confidence 5788899999999999999999999999999999999999999999999999999999999 999999 999988764
Q ss_pred hhhHHHHHHHHhhhhHHHHHHHhhhhhHHHHHhHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7403 88 ILDNLLSRMEQYANNLEALVEERTADYLEEKRKCEELLYQLLPKDYESNNILDNLLSRMEQYANNLEALVEERTADYLEE 167 (368)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~e~~~~~L~~~~~~~t~~l~~e 167 (368)
.|+..++++|+ +|+..+ +++..
T Consensus 79 ~~a~~a~~~al------------------------~~~~~~---------------------------------~~~~~- 100 (225)
T 3uvj_A 79 THAVQIALMAL------------------------KMMELS---------------------------------DEVMS- 100 (225)
T ss_dssp THHHHHHHHHH------------------------HHHHHH---------------------------------TTSBC-
T ss_pred HHHHHHHHHHH------------------------HHHHHH---------------------------------HHHHh-
Confidence 67888888887 555544 11111
Q ss_pred HhhhHHhhhhcCCCCCCCCccccccccccceeEEeccccccchhhhhcccccccccchhHHHHhhhccchhhhhhccccc
Q psy7403 168 KRKCEELLYQLLPNCYQGPCVAGVVGLKMPRYCLFGDTVNTASRMESNGQALKIHVSPFTKEVLDTFGTFDLELRGEVEM 247 (368)
Q Consensus 168 ~~~~~~Ll~~i~pgi~~G~v~~G~iG~~~~~~~lfgd~Vnfa~rles~~~~~~I~is~~~~~l~~~~~~fd~~~~~~~~~ 247 (368)
. ....+++++|+|+|++++|++|.+++.|++|||+||+|+||++.+.+++|++|+.+++++.....|.+...+...+
T Consensus 101 -~--~~~~l~~riGih~G~v~~G~iG~~~~~~~~~Gd~VN~AaRle~~a~~~~I~vS~~~~~~l~~~~~~~~~~~g~~~l 177 (225)
T 3uvj_A 101 -P--HGEPIKMRIGLHSGSVFAGVVGVKMPRYCLFGNNVTLANKFESCSVPRKINVSPTTYRLLKDCPGFVFTPRSREEL 177 (225)
T ss_dssp -T--TSCBCCEEEEEEEEEEEEEEECC-CCEEEEESHHHHHHHHHHHTSCTTCEEECHHHHHHHTTSTTEEEEECCSTTS
T ss_pred -h--cCCceEEEEEEEeccEEEEEecCCCceEEEECcHHHHHHHHHhcCCCCeEEECHHHHHhhcCCCceEEEEcCcEEe
Confidence 1 1123499999999999999999988899999999999999999999999999999999998765688888888777
Q ss_pred eee----eeecEEEEEecC
Q psy7403 248 KVE----TIGDAYMVVSGL 262 (368)
Q Consensus 248 K~k----tigd~Y~~~~g~ 262 (368)
|.+ ..+.+|.+....
T Consensus 178 k~~~~~~~~~~~y~l~~~~ 196 (225)
T 3uvj_A 178 PPNFPSEIPGICHFLDAYQ 196 (225)
T ss_dssp CTTSCTTSCCCCEEEEEEC
T ss_pred cCCCCCCCceEEEEEeccc
Confidence 532 256788776543
No 3
>2wz1_A Guanylate cyclase soluble subunit beta-1; lyase, GUCY1, metal-binding, CGMP biosynthesis, nucleotide-B cyclase, GUCY1B3, GTP-binding; 1.63A {Homo sapiens} PDB: 3uvj_B
Probab=99.97 E-value=1.1e-31 Score=240.64 Aligned_cols=189 Identities=35% Similarity=0.499 Sum_probs=156.5
Q ss_pred cCCcccccccCceEEEeeccCCchhhccCCC----hHHHHHHHHHHHHHHhhhhh---cccceeEEEEeecceEEEeecc
Q psy7403 8 LGQSVVAETYDSVTIYFSDIVGFTSLSAEST----PLQVVELLNDLYTCFDSVIE---NFDVYKVIFVVLSEIYSISLAA 80 (368)
Q Consensus 8 ~g~~~~~~~~~~vtilf~di~gft~ls~~~~----~~~~~~~Ln~~f~~~~~~i~---~~~~~~~~~~~~Gd~~~~~~~g 80 (368)
+|+..++++++++||||+||+|||.+++.++ |++++.+||++|+.|++++. +|+++++|++ ||+||+ +||
T Consensus 1 ~G~~~~~~~~~~vtvlF~DI~gfT~l~e~~~~~~~~~~~~~~Ln~~~~~~~~~i~~~~~~~g~~~k~~--GD~~ma-~fg 77 (219)
T 2wz1_A 1 HKRPVPAKRYDNVTILFSGIVGFNAFCSKHASGEGAMKIVNLLNDLYTRFDTLTDSRKNPFVYKVETV--GDKYMT-VSG 77 (219)
T ss_dssp ----CCCEEEEEEEEEEEEETTHHHHHHHSCCC--HHHHHHHHHHHHHHHHHHHCTTTCTTCEEECCC--TTCEEE-EES
T ss_pred CCCccCccceeeEEEEEEEccCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHhhccCCEEEEeec--CCEEEE-EEC
Confidence 4788899999999999999999999999999 99999999999999999999 8899999999 999999 999
Q ss_pred ccccccchhhHHHHHHHHhhhhHHHHHHHhhhhhHHHHHhHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Q psy7403 81 LDYESNNILDNLLSRMEQYANNLEALVEERTADYLEEKRKCEELLYQLLPKDYESNNILDNLLSRMEQYANNLEALVEER 160 (368)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~e~~~~~L~~~~~~~ 160 (368)
.|.... +|+..++++|+ +|+..+
T Consensus 78 ~p~~~~-~~a~~A~~~Al------------------------~~~~~~-------------------------------- 100 (219)
T 2wz1_A 78 LPEPCI-HHARSICHLAL------------------------DMMEIA-------------------------------- 100 (219)
T ss_dssp SSSCCT-THHHHHHHHHH------------------------HHHHHH--------------------------------
T ss_pred CCCCCh-hHHHHHHHHHH------------------------HHHHHH--------------------------------
Confidence 998754 67788888887 666555
Q ss_pred HHHHHHHHhhhHHhhhhcCCCCCCCCccccccccccceeEEeccccccchhhhhcccccccccchhHHHHhh----hccc
Q psy7403 161 TADYLEEKRKCEELLYQLLPNCYQGPCVAGVVGLKMPRYCLFGDTVNTASRMESNGQALKIHVSPFTKEVLD----TFGT 236 (368)
Q Consensus 161 t~~l~~e~~~~~~Ll~~i~pgi~~G~v~~G~iG~~~~~~~lfgd~Vnfa~rles~~~~~~I~is~~~~~l~~----~~~~ 236 (368)
++++ .. ...+++++|+|+|++++|++|.+++.|++|||+||+|+||++.+.+++|++|+.++.++. ....
T Consensus 101 -~~~~---~~--~~~l~~rIGi~~G~v~~G~iG~~~~~~~v~Gd~VN~AaRLe~~a~~~~IlvS~~~~~~l~~~~~~~~~ 174 (219)
T 2wz1_A 101 -GQVQ---VD--GESVQITIGIHTGEVVTGVIGQRMPRYCLFGNTVNLTSRTETTGEKGKINVSEYTYRCLMSPENSDPQ 174 (219)
T ss_dssp -TTCE---ET--TEECCEEEEEEEEEEEEEEECSSSCEEEEESHHHHHHHHHHHTSCTTSEEEEHHHHHHTTSTTTCCTT
T ss_pred -HHHh---cc--CCceEEEEEEEEEEEEEEEeCCCceEEEEECHHHHHHHHHHhcCCCCeEEECHHHHHHHhhhcccCCc
Confidence 2111 11 223499999999999999999887789999999999999999999999999999999985 2235
Q ss_pred hhhhhhccccceeeeeecEEEEEecC
Q psy7403 237 FDLELRGEVEMKVETIGDAYMVVSGL 262 (368)
Q Consensus 237 fd~~~~~~~~~K~ktigd~Y~~~~g~ 262 (368)
|.+...+...+||+...-.+|.+.+.
T Consensus 175 ~~~~~~g~~~lKG~~~~~~vy~l~~~ 200 (219)
T 2wz1_A 175 FHLEHRGPVSMKGKKEPMQVWFLSRK 200 (219)
T ss_dssp EEEEEEEEECCTTCSSCEEEEEEEES
T ss_pred eEEEEeCCEEecCCCccEEEEEEecc
Confidence 77777788888998776444444443
No 4
>3et6_A Soluble guanylyl cyclase beta; guanylate cyclase, dimethylarsenic, lyase, membrane, transmembrane; 2.55A {Chlamydomonas reinhardtii} PDB: 3et6_B
Probab=99.96 E-value=6.1e-31 Score=230.83 Aligned_cols=184 Identities=35% Similarity=0.551 Sum_probs=157.6
Q ss_pred ccccccCceEEEeeccCCchhhccCCChHHHHHHHHHHHHHHhhhhhcc-cceeEEEEeecceEEEeeccccccccchhh
Q psy7403 12 VVAETYDSVTIYFSDIVGFTSLSAESTPLQVVELLNDLYTCFDSVIENF-DVYKVIFVVLSEIYSISLAALDYESNNILD 90 (368)
Q Consensus 12 ~~~~~~~~vtilf~di~gft~ls~~~~~~~~~~~Ln~~f~~~~~~i~~~-~~~~~~~~~~Gd~~~~~~~g~~~~~~~~~~ 90 (368)
.++++++++||||+||+|||.+++.++|++++.+||++|..+++++.+| |+++++++ ||+||+ +||.|.... .++
T Consensus 2 ~~~~e~~~vtvlf~Di~gft~l~~~~~~~~~~~~l~~~~~~~~~~i~~~~g~~~vk~~--GD~~~a-~fg~~~~~~-~~~ 77 (190)
T 3et6_A 2 APAQEHPEATVLFSDIVGFTEIASRSSPLEVXSLLDELYQRFDAAIEEYPQLYKVETI--GDAYMV-VCNVTVPCD-DHA 77 (190)
T ss_dssp CCCEEEEEEEEEEEEETTHHHHTTTSCHHHHHHHHHHHHHHHHHHGGGCTTEEEEECT--TSCEEE-EESSSSCCS-THH
T ss_pred CCccccceEEEEEeEecChhHhHhhCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEEe--CCEEEE-EECCCCCch-hHH
Confidence 3567899999999999999999999999999999999999999999999 78889999 999999 999998754 677
Q ss_pred HHHHHHHHhhhhHHHHHHHhhhhhHHHHHhHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy7403 91 NLLSRMEQYANNLEALVEERTADYLEEKRKCEELLYQLLPKDYESNNILDNLLSRMEQYANNLEALVEERTADYLEEKRK 170 (368)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~e~~~~~L~~~~~~~t~~l~~e~~~ 170 (368)
..++++|+ +|+..+ +++. .
T Consensus 78 ~~a~~~al------------------------~~~~~~---------------------------------~~~~----~ 96 (190)
T 3et6_A 78 DVLLEFAL------------------------RMHEEA---------------------------------SRVA----S 96 (190)
T ss_dssp HHHHHHHH------------------------HHHHHH---------------------------------HTSC----C
T ss_pred HHHHHHHH------------------------HHHHHH---------------------------------HHHH----h
Confidence 77888887 555544 1111 1
Q ss_pred hHHhhhhcCCCCCCCCccccccccccceeEEeccccccchhhhhcccccccccchhHHHHhhhccchhhhhhccccceee
Q psy7403 171 CEELLYQLLPNCYQGPCVAGVVGLKMPRYCLFGDTVNTASRMESNGQALKIHVSPFTKEVLDTFGTFDLELRGEVEMKVE 250 (368)
Q Consensus 171 ~~~Ll~~i~pgi~~G~v~~G~iG~~~~~~~lfgd~Vnfa~rles~~~~~~I~is~~~~~l~~~~~~fd~~~~~~~~~K~k 250 (368)
.....+++++|+|+|++++|++|.+++.|++|||+||.|+||++.+.+++|++|+.++.++.....|.+...+...+|||
T Consensus 97 ~~~~~l~~riGi~~G~v~~g~vG~~~~~~~v~G~~Vn~Aarl~~~a~~~~I~vs~~~~~~l~~~~~~~~~~~g~~~lkG~ 176 (190)
T 3et6_A 97 SLGEPVRIRVGMHSGPVVAGVVGRKMPRFXLFGDTVNTASRMESHGEAGQIHISEACYCCLRSKERFEIRERGNITVKGK 176 (190)
T ss_dssp C---CCCEEEEEEEEEEEEEEECSSSCEEEEESHHHHHHHHHHHTSCTTSEEEEHHHHHHCSCGGGTCCCCEEEECCSSS
T ss_pred ccCCCceEEEEEEeccEEEEecCCCcceEEecCcchhHHHHHHhcCCCCeEEECHHHHHHhCcCCceEEEEcCCEEecCC
Confidence 11123499999999999999999888899999999999999999999999999999999987655688888888899999
Q ss_pred eeecEEEEEe
Q psy7403 251 TIGDAYMVVS 260 (368)
Q Consensus 251 tigd~Y~~~~ 260 (368)
....+|++..
T Consensus 177 ~~~~~y~l~~ 186 (190)
T 3et6_A 177 GTMRTYLLSP 186 (190)
T ss_dssp SCEEEEEECC
T ss_pred CeEEEEEEec
Confidence 8889998853
No 5
>1azs_A VC1; complex (lyase/hydrolase), hydrolase, signal transducing protein, cyclase, effector enzyme; HET: GSP FKP; 2.30A {Canis lupus familiaris} SCOP: d.58.29.1 PDB: 1cs4_A* 1u0h_A* 2gvd_A* 2gvz_A* 3c14_A* 3c15_A* 3c16_A* 3e8a_A* 3g82_A* 3maa_A* 1cul_A* 1cjk_A* 1cju_A* 1cjv_A* 1cjt_A* 1tl7_A*
Probab=99.96 E-value=1.9e-31 Score=238.98 Aligned_cols=187 Identities=21% Similarity=0.355 Sum_probs=154.5
Q ss_pred CCcccccccCceEEEeeccCCchhhccCCChHHHHHHHHHHHHHHhhhhhcccceeEEEEeecceEEEeeccccccccch
Q psy7403 9 GQSVVAETYDSVTIYFSDIVGFTSLSAESTPLQVVELLNDLYTCFDSVIENFDVYKVIFVVLSEIYSISLAALDYESNNI 88 (368)
Q Consensus 9 g~~~~~~~~~~vtilf~di~gft~ls~~~~~~~~~~~Ln~~f~~~~~~i~~~~~~~~~~~~~Gd~~~~~~~g~~~~~~~~ 88 (368)
.++.+.++++++||||+||+|||.+++.++|++++.+||++|+.+++++.+|+|+++|++ ||+||+ +||+|.... +
T Consensus 24 ~~~l~~~~~~~vtvlF~DI~gfT~l~e~~~~~~~~~~Ln~~~~~~~~~i~~~gG~v~k~i--GD~~ma-~fg~p~~~~-~ 99 (220)
T 1azs_A 24 FHKIYIQKHDNVSILFADIEGFTSLASQCTAQELVMTLNELFARFDKLAAENHCLRIKIL--GDCYYC-VSGLPEARA-D 99 (220)
T ss_dssp SCCCEEEEEEEEEEEEEEEETHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTEEEEEEE--TTEEEE-EESCSSCCS-T
T ss_pred cccccccccccEEEEEEEccChHHHHhhCCHHHHHHHHHHHHHHHHHHHHHcCcEEEEEe--CCeEEE-EECCCCCCh-H
Confidence 346778899999999999999999999999999999999999999999999999999999 999999 999998653 6
Q ss_pred hhHHHHHHHHhhhhHHHHHHHhhhhhHHHHHhHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7403 89 LDNLLSRMEQYANNLEALVEERTADYLEEKRKCEELLYQLLPKDYESNNILDNLLSRMEQYANNLEALVEERTADYLEEK 168 (368)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~e~~~~~L~~~~~~~t~~l~~e~ 168 (368)
++..++++|+ +|+..+ ++++...
T Consensus 100 ~a~~Av~~Al------------------------~m~~~l---------------------------------~~~~~~~ 122 (220)
T 1azs_A 100 HAHCCVEMGM------------------------DMIEAI---------------------------------SLVREMT 122 (220)
T ss_dssp HHHHHHHHHH------------------------HHHHHH---------------------------------HHHHHHH
T ss_pred HHHHHHHHHH------------------------HHHHHH---------------------------------HHHHhhc
Confidence 7778888887 666555 3332221
Q ss_pred hhhHHhhhhcCCCCCCCCccccccccccceeEEeccccccchhhhhcccccccccchhHHHHhhhccchhhhhh----cc
Q psy7403 169 RKCEELLYQLLPNCYQGPCVAGVVGLKMPRYCLFGDTVNTASRMESNGQALKIHVSPFTKEVLDTFGTFDLELR----GE 244 (368)
Q Consensus 169 ~~~~~Ll~~i~pgi~~G~v~~G~iG~~~~~~~lfgd~Vnfa~rles~~~~~~I~is~~~~~l~~~~~~fd~~~~----~~ 244 (368)
. ..+++++|+|+|++++|++|.+++.|++|||+||+|+||++.+.|++|++|+.++.++.. .|.+... +.
T Consensus 123 --~--~~l~irIGI~tG~v~~G~vG~~~~~y~v~Gd~VN~AaRLe~~a~~g~IlvS~~t~~~l~~--~f~~~~~~~~~r~ 196 (220)
T 1azs_A 123 --G--VNVNMRVGIHSGRVHCGVLGLRKWQFDVWSNDVTLANHMEAGGKAGRIHITKATLSYLNG--DYEVEPGCGGERN 196 (220)
T ss_dssp --C--SCCEEEEEEEEEEEEEEECSSSSCCCEEESHHHHHHHHHHHTCCTTSEEECSTTTTTTTT--CSCEEECCGGGTC
T ss_pred --C--CCcEEEEEEEEeEEEEEEeCCCCcEEEEEchHHHHHHHHHhcCCCCeEEECHHHHHhhcC--ceEEEECcCcccc
Confidence 1 234999999999999999998888899999999999999999999999999999998874 4655552 22
Q ss_pred ccceeeeeecEEEEEecCC
Q psy7403 245 VEMKVETIGDAYMVVSGLP 263 (368)
Q Consensus 245 ~~~K~ktigd~Y~~~~g~p 263 (368)
..+||+.+ .+|++.+..+
T Consensus 197 ~~lKg~~v-~~Y~l~~~~~ 214 (220)
T 1azs_A 197 AYLKEHSI-ETFLILRCTQ 214 (220)
T ss_dssp HHHHHTTC-CCEEEC----
T ss_pred ceecCCce-EEEEEecccc
Confidence 35788874 8898875443
No 6
>1yk9_A Adenylate cyclase; beta-alpha-beta sandwich, structural genomics, PSI, protein structure initiative; 2.70A {Mycobacterium tuberculosis}
Probab=99.96 E-value=1.4e-31 Score=237.52 Aligned_cols=186 Identities=28% Similarity=0.489 Sum_probs=158.2
Q ss_pred cccccccCceEEEeeccCCchhhccCCChHHHHHHHHHHHHHHhhhhhcccceeEEEEeecceEEEeeccccccccchhh
Q psy7403 11 SVVAETYDSVTIYFSDIVGFTSLSAESTPLQVVELLNDLYTCFDSVIENFDVYKVIFVVLSEIYSISLAALDYESNNILD 90 (368)
Q Consensus 11 ~~~~~~~~~vtilf~di~gft~ls~~~~~~~~~~~Ln~~f~~~~~~i~~~~~~~~~~~~~Gd~~~~~~~g~~~~~~~~~~ 90 (368)
..++++++++||||+||+|||.+++.++|++++.+||++|..+++++.+|+|+++|++ ||+||+ +||.|.... +|+
T Consensus 2 ~~~~~~~~~vtvlf~DI~gfT~l~~~~~~~~~~~~ln~~~~~~~~~i~~~gG~v~k~~--GD~~ma-~fg~p~~~~-~~a 77 (204)
T 1yk9_A 2 NIIADKYDEASVLFADIVGFTERASSTAPADLVRFLDRLYSAFDELVDQHGLEKIEVS--GDSYMV-VSGVPRPRP-DHT 77 (204)
T ss_dssp ----CCCSCEEEEEEEESCSSCSSCCCCSSSTTTHHHHHHTTTTGGGTTSSCEECCCS--SSCEEE-ESCCSSCCT-THH
T ss_pred CCCccccCcEEEEEEEccChHHHHhcCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEe--CCeEEE-EECCCCCCh-HHH
Confidence 3577899999999999999999999999999999999999999999999999999999 999999 999997653 677
Q ss_pred HHHHHHHHhhhhHHHHHHHhhhhhHHHHHhHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy7403 91 NLLSRMEQYANNLEALVEERTADYLEEKRKCEELLYQLLPKDYESNNILDNLLSRMEQYANNLEALVEERTADYLEEKRK 170 (368)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~e~~~~~L~~~~~~~t~~l~~e~~~ 170 (368)
..++++|+ +|+..+ ++++.. .
T Consensus 78 ~~A~~~Al------------------------~~~~~~---------------------------------~~~~~~--~ 98 (204)
T 1yk9_A 78 QALADFAL------------------------DMTNVA---------------------------------AQLKDP--R 98 (204)
T ss_dssp HHHHTHHH------------------------HHHHHT---------------------------------TTCCSS--S
T ss_pred HHHHHHHH------------------------HHHHHH---------------------------------HHHHhc--c
Confidence 78888887 666655 211111 1
Q ss_pred hHHhhhhcCCCCCCCCccccccccccceeEEeccccccchhhhhcccccccccchhHHHHhhhccchhhhhhccccceee
Q psy7403 171 CEELLYQLLPNCYQGPCVAGVVGLKMPRYCLFGDTVNTASRMESNGQALKIHVSPFTKEVLDTFGTFDLELRGEVEMKVE 250 (368)
Q Consensus 171 ~~~Ll~~i~pgi~~G~v~~G~iG~~~~~~~lfgd~Vnfa~rles~~~~~~I~is~~~~~l~~~~~~fd~~~~~~~~~K~k 250 (368)
... +++++|+|+|++++|++|.+++.|++|||+||.|+||++.+.+++|++|+.+++++.. .|.+...+...+||+
T Consensus 99 ~~~--l~~rIGI~tG~v~~g~vG~~r~~~~v~G~~Vn~AaRle~~a~~g~I~vs~~~~~~l~~--~~~~~~~g~~~lkG~ 174 (204)
T 1yk9_A 99 GNP--VPLRVGLATGPVVAGVVGSRRFRYCVWGDAVNVASRMESTDSVGQIQVPDEVYERLKD--DFVLRERGHINVKGK 174 (204)
T ss_dssp CCC--CCEEEEEEEECEEECCCCSSSCCCCEEEHHHHHTTHHHHSCSTTCEEBCHHHHHCCTT--CEEEEECCCCCCSSS
T ss_pred CCC--ceEEEEEEeeEEEEEEecCCCceEEEEChHHHHHHHHHhcCCCCeEEECHHHHHHhhc--CeeEEEcceEEecCC
Confidence 123 4899999999999999999877899999999999999999999999999999998875 577888888889999
Q ss_pred eeecEEEEEecCC
Q psy7403 251 TIGDAYMVVSGLP 263 (368)
Q Consensus 251 tigd~Y~~~~g~p 263 (368)
....+|.+.+-.+
T Consensus 175 ~~~~~y~l~~~~~ 187 (204)
T 1yk9_A 175 GVMRTWYLIGRKV 187 (204)
T ss_dssp SSCCCCEEEEEEC
T ss_pred CccEEEEEEeccC
Confidence 8889998876554
No 7
>2w01_A Adenylate cyclase; guanylyl cyclase, class III nucleotidyl cyclase, lyase; 2.31A {Synechocystis SP}
Probab=99.96 E-value=1.5e-29 Score=225.16 Aligned_cols=185 Identities=21% Similarity=0.154 Sum_probs=152.6
Q ss_pred ccccCceEEEeeccCCchhhccCCChHHHHHHHHHHHHHHhhhhhcccceeEEEEeecceEEEeeccccccccchhhHHH
Q psy7403 14 AETYDSVTIYFSDIVGFTSLSAESTPLQVVELLNDLYTCFDSVIENFDVYKVIFVVLSEIYSISLAALDYESNNILDNLL 93 (368)
Q Consensus 14 ~~~~~~vtilf~di~gft~ls~~~~~~~~~~~Ln~~f~~~~~~i~~~~~~~~~~~~~Gd~~~~~~~g~~~~~~~~~~~~~ 93 (368)
..+++++||||+||+|||.+++.++|++++.+||++|+.+++++.+|+|+++|++ ||+||+ +||.|.... +++..+
T Consensus 9 ~~e~~~vtvlf~Di~gfT~l~~~~~~~~~~~~l~~~~~~~~~~i~~~~G~v~k~~--GD~~~a-~fg~p~~~~-~~a~~A 84 (208)
T 2w01_A 9 GGDRRPITILTSDLRGFTSTSEGLNPEEVVKVLNIYFGKMADVITHHGGTIDEFM--GDGILV-LFGAPTSQQ-DDALRA 84 (208)
T ss_dssp CCEEEEEEEEEEECTTHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHTTCEEEEEE--TTEEEE-EESSSSCCT-THHHHH
T ss_pred CCeEEEEEEEEEEecChHHHHhhCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEE--cCEEEE-EECCCCCCh-hHHHHH
Confidence 3578999999999999999999999999999999999999999999999999999 999999 999987653 677778
Q ss_pred HHHHHhhhhHHHHHHHhhhhhHHHHHhHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Q psy7403 94 SRMEQYANNLEALVEERTADYLEEKRKCEELLYQLLPKDYESNNILDNLLSRMEQYANNLEALVEERTADYLEEKRKCEE 173 (368)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~e~~~~~L~~~~~~~t~~l~~e~~~~~~ 173 (368)
+++|+ +|+..+ ++++........
T Consensus 85 v~~Al------------------------~~~~~l---------------------------------~~~~~~~~~~~~ 107 (208)
T 2w01_A 85 VACGV------------------------EMQLAL---------------------------------REVNQQVTGLGL 107 (208)
T ss_dssp HHHHH------------------------HHHHHH---------------------------------HHHHHHHHTTTC
T ss_pred HHHHH------------------------HHHHHH---------------------------------HHHHHHHhhcCC
Confidence 88887 666555 333322221111
Q ss_pred hhhhcCCCCCCCCcccccccc-ccceeEEeccccccchhhhhcccccccccchhHHHHhhhccchhhhhhccccceeeee
Q psy7403 174 LLYQLLPNCYQGPCVAGVVGL-KMPRYCLFGDTVNTASRMESNGQALKIHVSPFTKEVLDTFGTFDLELRGEVEMKVETI 252 (368)
Q Consensus 174 Ll~~i~pgi~~G~v~~G~iG~-~~~~~~lfgd~Vnfa~rles~~~~~~I~is~~~~~l~~~~~~fd~~~~~~~~~K~kti 252 (368)
..+++++|+|+|++++|++|. +++.|++|||+||.|+||++.+.+++|++|+.+++++.. .|.+...+...+||+..
T Consensus 108 ~~l~~riGi~~G~v~~g~vG~~~r~~~~v~G~~Vn~AaRl~~~a~~~~I~vs~~~~~~l~~--~~~~~~~~~~~lkG~~~ 185 (208)
T 2w01_A 108 QPLEMGIGINTGEVVVGNIGSEKRTKYGVVGAQVNLTYRIESYTTGGQIFISSTTLEAAGD--RVHVNGNRTVQPKGVKD 185 (208)
T ss_dssp CCCCCEEEEEEEEEEEEEEECSSCEEEEEESHHHHHHHHHHHTCCTTCEEEEHHHHHHHCT--TEEEEEEEEECCTTCSS
T ss_pred CceEEEEEEEeeEEEEEEeCCCCeeEEEEECHHHHHHHHHHccCCCCeEEECHHHHHhhhc--ceEecccceEeecCCCC
Confidence 224899999999999999996 566799999999999999999999999999999999875 46666666777788764
Q ss_pred e-cEEEEEec
Q psy7403 253 G-DAYMVVSG 261 (368)
Q Consensus 253 g-d~Y~~~~g 261 (368)
. ..|.+.+-
T Consensus 186 ~~~vy~v~~~ 195 (208)
T 2w01_A 186 PVVIWDVAGV 195 (208)
T ss_dssp CEEEEEEEEE
T ss_pred cEEEEEEccC
Confidence 4 66766553
No 8
>1wc3_A Adenylate cyclase; soluble adenylyl cyclase, CAMP signaling, lyase; HET: APC; 1.9A {Spirulina platensis} SCOP: d.58.29.1 PDB: 1wc0_A* 1wc4_A* 1wc5_A* 2bw7_A* 1wc1_A* 1wc6_A*
Probab=99.95 E-value=4.1e-29 Score=224.08 Aligned_cols=187 Identities=21% Similarity=0.186 Sum_probs=148.0
Q ss_pred CCcccccccCceEEEeeccCCchhhccCCChHHHHHHHHHHHHHHhhhhhcccceeEEEEeecceEEEeeccccccc-cc
Q psy7403 9 GQSVVAETYDSVTIYFSDIVGFTSLSAESTPLQVVELLNDLYTCFDSVIENFDVYKVIFVVLSEIYSISLAALDYES-NN 87 (368)
Q Consensus 9 g~~~~~~~~~~vtilf~di~gft~ls~~~~~~~~~~~Ln~~f~~~~~~i~~~~~~~~~~~~~Gd~~~~~~~g~~~~~-~~ 87 (368)
+......+.+++||||+||+|||.+++.++|++++.+||++|+.+++++.+|+|+++|++ ||+||+ +||.|... ..
T Consensus 17 ~~~~l~~e~~~vtvlF~DI~gfT~l~~~~~~~~~~~~Ln~~~~~~~~~i~~~gG~v~k~i--GD~~ma-~fg~p~~~~~~ 93 (219)
T 1wc3_A 17 RGSHMRPEPRLITILFSDIVGFTRMSNALQSQGVAELLNEYLGEMTRAVFENQGTVDKFV--GDAIMA-LYGAPEEMSPS 93 (219)
T ss_dssp --CCCCCEEEEEEEEEEEEESHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHTTCEEEEEE--TTEEEE-EESSSSCCCHH
T ss_pred cccccCCceeEEEEEEEEecChHHHHhhCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEE--cCeEEE-EECCCCCCCCh
Confidence 344455677999999999999999999999999999999999999999999999999999 999999 99998753 23
Q ss_pred hhhHHHHHHHHhhhhHHHHHHHhhhhhHHHHHhHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7403 88 ILDNLLSRMEQYANNLEALVEERTADYLEEKRKCEELLYQLLPKDYESNNILDNLLSRMEQYANNLEALVEERTADYLEE 167 (368)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~e~~~~~L~~~~~~~t~~l~~e 167 (368)
+++..++++|+ +|+..+ ++++..
T Consensus 94 ~~a~~Av~~Al------------------------~~~~~l---------------------------------~~~~~~ 116 (219)
T 1wc3_A 94 EQVRRAIATAR------------------------QMLVAL---------------------------------EKLNQG 116 (219)
T ss_dssp HHHHHHHHHHH------------------------HHHHHH---------------------------------HHHHHH
T ss_pred HHHHHHHHHHH------------------------HHHHHH---------------------------------HHHHHH
Confidence 45666777777 555555 223222
Q ss_pred Hhh------hHHhhhhcCCCCCCCCcccccccc-ccceeEEeccccccchhhhhcccccccccchhHHHHhhhccchhhh
Q psy7403 168 KRK------CEELLYQLLPNCYQGPCVAGVVGL-KMPRYCLFGDTVNTASRMESNGQALKIHVSPFTKEVLDTFGTFDLE 240 (368)
Q Consensus 168 ~~~------~~~Ll~~i~pgi~~G~v~~G~iG~-~~~~~~lfgd~Vnfa~rles~~~~~~I~is~~~~~l~~~~~~fd~~ 240 (368)
... .....+++++|+|+|++++|++|. +++.|++|||+||.|+||++.+.+++|++|+.+++++... .+.
T Consensus 117 ~~~~~~~~~~~~~~l~~rIGIh~G~v~~G~vG~~~r~~y~v~Gd~VN~AaRLe~~a~~g~IlvS~~~~~~l~~~---~~~ 193 (219)
T 1wc3_A 117 WQERGLVGRNEVPPVRFRCGIHQGMAVVGLFGSQERSDFTAIGPSVNIAARLQEATAPNSIMVSAMVAQYVPDE---EII 193 (219)
T ss_dssp HHHHTSSSSTTCCCCEEEEEEEEEEEEEEEEEETTEEEEEEESHHHHHHHHHHHHSCTTEEEEEHHHHTTSCGG---GEE
T ss_pred HhhcccccccCCCccEEEEEEEeceEEEEEcCCCCeeEEEEECHHHHHHHHHHhcCCCCeEEECHHHHHhhccc---cee
Confidence 211 011234899999999999999996 4567999999999999999999999999999999887653 445
Q ss_pred hhccccceeeeee-cEEEE
Q psy7403 241 LRGEVEMKVETIG-DAYMV 258 (368)
Q Consensus 241 ~~~~~~~K~ktig-d~Y~~ 258 (368)
..+...+||+... ..|.+
T Consensus 194 ~~g~~~lKG~~~~v~vy~v 212 (219)
T 1wc3_A 194 KREFLELKGIDEPVMTCVI 212 (219)
T ss_dssp EEEEECCTTCSSCEEEEEE
T ss_pred EeeeEEecccCCcEEEEEE
Confidence 5666778887644 55544
No 9
>3r5g_A CYAB; adenylyl cyclase, lyase; 1.50A {Pseudomonas aeruginosa} SCOP: d.58.29.0
Probab=99.95 E-value=5.7e-29 Score=219.67 Aligned_cols=185 Identities=22% Similarity=0.243 Sum_probs=150.9
Q ss_pred ccccCceEEEeeccCCchhhccCCChHHHHHHHHHHHHHHhhhhhcccceeEEEEeecceEEEeecccccccc-chhhHH
Q psy7403 14 AETYDSVTIYFSDIVGFTSLSAESTPLQVVELLNDLYTCFDSVIENFDVYKVIFVVLSEIYSISLAALDYESN-NILDNL 92 (368)
Q Consensus 14 ~~~~~~vtilf~di~gft~ls~~~~~~~~~~~Ln~~f~~~~~~i~~~~~~~~~~~~~Gd~~~~~~~g~~~~~~-~~~~~~ 92 (368)
..+.+++||||+||+|||.+++.++|++++.+||++|..+++++.+|+|++++++ ||+||+ +||.|.... ..++..
T Consensus 4 ~~e~~~vtvlf~Di~gft~l~~~~~~~~~~~~l~~~~~~~~~~i~~~~G~v~k~~--GD~~~a-~fg~p~~~~~~~~a~~ 80 (198)
T 3r5g_A 4 ETQRKKLTVFFSDIRGFTELSEELEAEALTDLLNNYLNEMSKIALKYGGTIDKFV--GDCVMV-FFGDPSTQGAKKDAVA 80 (198)
T ss_dssp CCEEEEEEEEEEEEETHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEE--TTEEEE-EESSSSCSCHHHHHHH
T ss_pred CceEEEEEEEEEEccccchhhhhCCHHHHHHHHHHHHHHHHHHHHHcCCEEEeee--CCEEEE-EECCCcccccHHHHHH
Confidence 3567899999999999999999999999999999999999999999999999999 999999 999987642 245555
Q ss_pred HHHHHHhhhhHHHHHHHhhhhhHHHHHhHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-
Q psy7403 93 LSRMEQYANNLEALVEERTADYLEEKRKCEELLYQLLPKDYESNNILDNLLSRMEQYANNLEALVEERTADYLEEKRKC- 171 (368)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~e~~~~~L~~~~~~~t~~l~~e~~~~- 171 (368)
++++|+ +|+..+ +.++......
T Consensus 81 a~~~al------------------------~i~~~~---------------------------------~~~~~~~~~~~ 103 (198)
T 3r5g_A 81 AVSMGI------------------------AMRKHM---------------------------------KVLRQQWRAQG 103 (198)
T ss_dssp HHHHHH------------------------HHHHHH---------------------------------HHHHHHHHTTT
T ss_pred HHHHHH------------------------HHHHHH---------------------------------HHHHHHHHhcC
Confidence 666666 555544 3333332221
Q ss_pred HHhhhhcCCCCCCCCccccccccc-cceeEEeccccccchhhhhcccccccccchhHHHHhhhccchhhhhhccccceee
Q psy7403 172 EELLYQLLPNCYQGPCVAGVVGLK-MPRYCLFGDTVNTASRMESNGQALKIHVSPFTKEVLDTFGTFDLELRGEVEMKVE 250 (368)
Q Consensus 172 ~~Ll~~i~pgi~~G~v~~G~iG~~-~~~~~lfgd~Vnfa~rles~~~~~~I~is~~~~~l~~~~~~fd~~~~~~~~~K~k 250 (368)
....+++++|+|+|++++|++|.. ++.|++|||+||.|+||++.+.+++|++|+.+++++.. .|.+...+...+||+
T Consensus 104 ~~~~l~~riGi~~G~v~~g~vG~~~~~~~~v~G~~Vn~Aarl~~~a~~~~I~vs~~~~~~l~~--~~~~~~~g~~~lkG~ 181 (198)
T 3r5g_A 104 ITKPLEIRMGINTGYCTVGNFGADTRMDYTIIGREVNLASRLESASEAGEILISHETYSLIKD--VIMCRDKGQIAVKGF 181 (198)
T ss_dssp CCSCCEEEEEEEEEEEEEEEEEETTEEEEEEESHHHHHHHHHHHHCCTTCEEEEHHHHHHHTT--TSCEEEEEEECCTTC
T ss_pred CCCceEEEEEEEEEEEEEEEeCCCcceEEEEECcHHHHHHHHHhhCCCCcEEECHHHHHHhhc--CceEEEcccEEeecC
Confidence 112348999999999999999976 45799999999999999999999999999999999874 477777788888998
Q ss_pred eee-cEEEEEe
Q psy7403 251 TIG-DAYMVVS 260 (368)
Q Consensus 251 tig-d~Y~~~~ 260 (368)
... ..|.+..
T Consensus 182 ~~p~~vy~v~~ 192 (198)
T 3r5g_A 182 SRPVQIYQVVD 192 (198)
T ss_dssp SSCEEEEEECC
T ss_pred CCcEEEEEEee
Confidence 764 5555543
No 10
>1fx2_A Receptor-type adenylate cyclase gresag 4.1; CAMP, trypanosomes, adenylyl cyclases, monomer-dimer, catalysis, lyase; 1.46A {Trypanosoma brucei} SCOP: d.58.29.1 PDB: 1fx4_A
Probab=99.94 E-value=4.8e-28 Score=219.45 Aligned_cols=214 Identities=21% Similarity=0.253 Sum_probs=150.6
Q ss_pred CCcccccccCceEEEeeccCCchhhccCCChHHHHHHHHHHHHHHhhhhhcccceeEEEEeecceEEEeeccccccccch
Q psy7403 9 GQSVVAETYDSVTIYFSDIVGFTSLSAESTPLQVVELLNDLYTCFDSVIENFDVYKVIFVVLSEIYSISLAALDYESNNI 88 (368)
Q Consensus 9 g~~~~~~~~~~vtilf~di~gft~ls~~~~~~~~~~~Ln~~f~~~~~~i~~~~~~~~~~~~~Gd~~~~~~~g~~~~~~~~ 88 (368)
|+..+++.+++|||||+||+|||.+++.+ |++++.+||.+|+.+++++.+|+|+++|++ ||+||+ +||.|..
T Consensus 2 ~~~~~~~~~~~vtvlF~DI~gfT~l~~~~-~~~~~~~l~~~~~~~~~~i~~~~G~v~k~~--GD~~ma-~fg~p~~---- 73 (235)
T 1fx2_A 2 NNRAPKEPTDPVTLIFTDIESSTALWAAH-PDLMPDAVAAHHRMVRSLIGRYKCYEVKTV--GDSFMI-ASKSPFA---- 73 (235)
T ss_dssp GGGSCCCTTSCEEEEEEEETTHHHHHHHC-TTTHHHHHHHHHHHHHHHHHHTTCEEEEEE--TTEEEE-EESCHHH----
T ss_pred CCcCCCCCCCcEEEEEEeccChHHHHHHC-HHHHHHHHHHHHHHHHHHHHHcCCEEEEEc--CCeEEE-EeCCHHH----
Confidence 56678899999999999999999999986 999999999999999999999999999999 999999 9998642
Q ss_pred hhHHHHHHHHhhhhHHHHHHHhhhhhHHHHHhHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH--HH
Q psy7403 89 LDNLLSRMEQYANNLEALVEERTADYLEEKRKCEELLYQLLPKDYESNNILDNLLSRMEQYANNLEALVEERTADY--LE 166 (368)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~e~~~~~L~~~~~~~t~~l--~~ 166 (368)
++++|+ +|+..+....|... .++.....++.............+..+ ..
T Consensus 74 ----A~~~Al------------------------~i~~~l~~~~w~~~-~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 124 (235)
T 1fx2_A 74 ----AVQLAQ------------------------ELQLCFLHHDWGTN-ALDDSYREFEEQRAEGECEYTPPTAHMDPEV 124 (235)
T ss_dssp ----HHHHHH------------------------HHHHHHHHSCCSCS-HHHHHHHHHHHHHHHHCSSCCCSSTTSCHHH
T ss_pred ----HHHHHH------------------------HHHHHHHhCCCchh-HhhhhhhhhhhhccccccccCcccccccccc
Confidence 445555 55555533344321 122211111100000000000000000 00
Q ss_pred HHhhhHHhhhhcCCCCCCCCccccccccccceeEEeccccccchhhhhcccccccccchhHHHHhhh--ccchhhhhhcc
Q psy7403 167 EKRKCEELLYQLLPNCYQGPCVAGVVGLKMPRYCLFGDTVNTASRMESNGQALKIHVSPFTKEVLDT--FGTFDLELRGE 244 (368)
Q Consensus 167 e~~~~~~Ll~~i~pgi~~G~v~~G~iG~~~~~~~lfgd~Vnfa~rles~~~~~~I~is~~~~~l~~~--~~~fd~~~~~~ 244 (368)
.+..... +++++|+|+|++++|++|. +..|++|||+||.|+||++.+.+++|++|+.++.++.. ...|.+...+.
T Consensus 125 ~~~~~~~--l~~riGIh~G~v~~G~~G~-~~~~~v~Gd~VN~AaRle~~a~~g~IlvS~~~~~~l~~~~~~~~~~~~~g~ 201 (235)
T 1fx2_A 125 YSRLWNG--LRVRVGIHTGLCDIRHDEV-TKGYDYYGRTPNMAARTESVANGGQVLMTHAAYMSLSAEDRKQIDVTALGD 201 (235)
T ss_dssp HHHHCCS--CCEEEEEEEECCEEEECTT-SSSEEEESHHHHHHHHHHHTCCTTCEEEEHHHHHTSCHHHHHTCCEEEEEE
T ss_pred ccccccC--cEEEEEEEeeEEEEEeccc-ccceEEECHHHHHHHHHHhhcCCCEEEECHHHHHHHhhhcccCceeEeccc
Confidence 0000112 4899999999999999997 66899999999999999999999999999999998753 13477777778
Q ss_pred ccceeeeee-cEEEEEecCC
Q psy7403 245 VEMKVETIG-DAYMVVSGLP 263 (368)
Q Consensus 245 ~~~K~ktig-d~Y~~~~g~p 263 (368)
..+||+... ..|.+ .+.+
T Consensus 202 ~~lkG~~~~v~vy~l-~~~~ 220 (235)
T 1fx2_A 202 VALRGVSDPVKMYQL-NTVP 220 (235)
T ss_dssp ECCTTCSSCEEEEEE-CCST
T ss_pred EEecccCCceEEEEE-eccC
Confidence 888998755 55554 4443
No 11
>1y10_A Hypothetical protein RV1264/MT1302; adenylyl cyclase fold, lyase; HET: 1PE; 2.30A {Mycobacterium tuberculosis} PDB: 1y11_A*
Probab=99.94 E-value=5.9e-28 Score=233.61 Aligned_cols=178 Identities=19% Similarity=0.151 Sum_probs=144.4
Q ss_pred hhhHhhcCCcc------------cccccCceEEEeeccCCchhhccCCChHHHHHHHHHHHHHHhhhhhcccceeEEEEe
Q psy7403 2 VASQLILGQSV------------VAETYDSVTIYFSDIVGFTSLSAESTPLQVVELLNDLYTCFDSVIENFDVYKVIFVV 69 (368)
Q Consensus 2 i~~~l~~g~~~------------~~~~~~~vtilf~di~gft~ls~~~~~~~~~~~Ln~~f~~~~~~i~~~~~~~~~~~~ 69 (368)
|+++|+.+... +..++++|||||+||+|||.+++.++|++++.+||+||+.++.++. |+|+++|++
T Consensus 186 va~~L~~~~~~~~v~~~~r~~~~~~~~~~~vTVlFaDIvgFT~ls~~~~p~evv~lLn~~~~~~~~i~~-~~g~~iKti- 263 (407)
T 1y10_A 186 LFMQLRHMMETEAVNAGERAAGKPLPGARQVTVAFADLVGFTQLGEVVSAEELGHLAGRLAGLARDLTA-PPVWFIKTI- 263 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSCCTTCEEEEEEEEEECSBCTTSCBCCHHHHHHHHHHHHHHHHHHCC-TTCEEEEEE-
T ss_pred HHHHHHhcccchhhhhhhhcccccccceeeEEEEEEEccCchHHHhhCCHHHHHHHHHHHHHHHHHHHH-cCcEEEEEe-
Confidence 56666666432 3347899999999999999999999999999999999998888776 899999999
Q ss_pred ecceEEEeeccccccccchhhHHHHHHHHhhhhHHHHHHHhhhhhHHHHHhHHHHHHhhcCCCCCCcchHHHHHHHHHHH
Q psy7403 70 LSEIYSISLAALDYESNNILDNLLSRMEQYANNLEALVEERTADYLEEKRKCEELLYQLLPKDYESNNILDNLLSRMEQY 149 (368)
Q Consensus 70 ~Gd~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~e~~ 149 (368)
||+||| +||.|. .++++|+ +|+..+
T Consensus 264 -GDa~ma-vfg~p~--------~a~~~Al------------------------~m~~~l--------------------- 288 (407)
T 1y10_A 264 -GDAVML-VCPDPA--------PLLDTVL------------------------KLVEVV--------------------- 288 (407)
T ss_dssp -TTEEEE-EESSHH--------HHHHHHH------------------------HHHHHH---------------------
T ss_pred -cceEEE-EECCHH--------HHHHHHH------------------------HHHHHH---------------------
Confidence 999999 999864 2455666 555444
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHhhhhcCCCCCCCCccccccccccceeEEeccccccchhhhhcccccccccchhHHH
Q psy7403 150 ANNLEALVEERTADYLEEKRKCEELLYQLLPNCYQGPCVAGVVGLKMPRYCLFGDTVNTASRMESNGQALKIHVSPFTKE 229 (368)
Q Consensus 150 ~~~L~~~~~~~t~~l~~e~~~~~~Ll~~i~pgi~~G~v~~G~iG~~~~~~~lfgd~Vnfa~rles~~~~~~I~is~~~~~ 229 (368)
+. .+..+ ++++|+|+|+|++|+ |++|||+||+|+||++.+.|++|++|+.+++
T Consensus 289 ------------~~------~~~~l--~iRIGIhtG~Vv~Gv-------ydv~GdtVN~AsRLes~a~~g~I~vS~~t~~ 341 (407)
T 1y10_A 289 ------------DT------DNNFP--RLRAGVASGMAVSRA-------GDWFGSPVNVASRVTGVARPGAVLVADSVRE 341 (407)
T ss_dssp ------------HT------CTTSC--CEEEEEEEEEEEEET-------TEEEEHHHHHHHHHHHHCCTTCEEEEHHHHH
T ss_pred ------------HH------hCCCc--eEEEEEEEEEEEEec-------CccCCCHHHHHHHHHhcCCCCeEEECHHHHH
Confidence 11 11233 899999999999983 6899999999999999999999999999999
Q ss_pred Hhhhc---cchhhhhhccccceee-eeecEEEEEecCC
Q psy7403 230 VLDTF---GTFDLELRGEVEMKVE-TIGDAYMVVSGLP 263 (368)
Q Consensus 230 l~~~~---~~fd~~~~~~~~~K~k-tigd~Y~~~~g~p 263 (368)
++... ..|.+...+...+||| ....+|++....+
T Consensus 342 ~l~~~~~~~~f~~~~~G~v~lKGk~~~v~~y~l~~~~~ 379 (407)
T 1y10_A 342 ALGDAPEADGFQWSFAGPRRLRGIRGDVRLFRVRRGAT 379 (407)
T ss_dssp SCCCC---CCCEEEEEEEECCTTCCSCEEEEEEEC---
T ss_pred HHhcccccCceEEEEeceEEeCCCCCceEEEEEcccCC
Confidence 98753 3588888888889998 6779998876544
No 12
>1ybt_A Hydrolase, alpha/beta hydrolase fold family; cyclase homology domain, CHD, RV1900C; 2.31A {Mycobacterium tuberculosis} PDB: 1ybu_A*
Probab=99.94 E-value=7.8e-28 Score=209.94 Aligned_cols=170 Identities=16% Similarity=0.096 Sum_probs=138.3
Q ss_pred cCCcccccccCceEEEeeccCCchhhccCCChHHHHHHHHHHHHHHhhhhhcccceeEEEEeecceEEEeeccccccccc
Q psy7403 8 LGQSVVAETYDSVTIYFSDIVGFTSLSAESTPLQVVELLNDLYTCFDSVIENFDVYKVIFVVLSEIYSISLAALDYESNN 87 (368)
Q Consensus 8 ~g~~~~~~~~~~vtilf~di~gft~ls~~~~~~~~~~~Ln~~f~~~~~~i~~~~~~~~~~~~~Gd~~~~~~~g~~~~~~~ 87 (368)
.+...+..+++++||||+||+|||.+++.++|++++.+||++|..+++++.+|+|+++|++ ||+||+ +||.|.
T Consensus 6 ~~~~~~~~~~~~~tvlf~Di~gft~l~~~~~~~~~~~~l~~~~~~~~~~i~~~gG~v~k~~--GD~~ma-~f~~p~---- 78 (184)
T 1ybt_A 6 HHHHHGSAERMLATIMFTDIVGSTQHAAALGDDRWRDLLDNHDTIVCHEIQRFGGREVNTA--GDGFVA-TFTSPS---- 78 (184)
T ss_dssp -------CEEEEEEEEEEEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEECCCS--SSSEEE-EESCHH----
T ss_pred CCCCCCCCceEEEEEEEEECcCcHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCEEEeEe--CCEEEE-EeCCHH----
Confidence 4556677889999999999999999999999999999999999999999999999999999 999999 998762
Q ss_pred hhhHHHHHHHHhhhhHHHHHHHhhhhhHHHHHhHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7403 88 ILDNLLSRMEQYANNLEALVEERTADYLEEKRKCEELLYQLLPKDYESNNILDNLLSRMEQYANNLEALVEERTADYLEE 167 (368)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~e~~~~~L~~~~~~~t~~l~~e 167 (368)
.++++|+ +|+..+ .+
T Consensus 79 ----~A~~~Al------------------------~~~~~l---------------------------------~~---- 93 (184)
T 1ybt_A 79 ----AAIACAD------------------------DIVDAV---------------------------------AA---- 93 (184)
T ss_dssp ----HHHHHHH------------------------HHHHHH---------------------------------HT----
T ss_pred ----HHHHHHH------------------------HHHHHH---------------------------------Hh----
Confidence 3455555 555444 11
Q ss_pred HhhhHHhhhhcCCCCCCCCccccccccccceeEEeccccccchhhhhcccccccccchhHHHHhhhccchhhhhhccccc
Q psy7403 168 KRKCEELLYQLLPNCYQGPCVAGVVGLKMPRYCLFGDTVNTASRMESNGQALKIHVSPFTKEVLDTFGTFDLELRGEVEM 247 (368)
Q Consensus 168 ~~~~~~Ll~~i~pgi~~G~v~~G~iG~~~~~~~lfgd~Vnfa~rles~~~~~~I~is~~~~~l~~~~~~fd~~~~~~~~~ 247 (368)
+.+++++|+|+|+++.|.+|.. |++|||+||.|+||++.+.+++|++|+.+++++.. ..|.+...+...+
T Consensus 94 ------~~l~~riGi~~G~v~~g~ig~~---~~~~G~~Vn~AaRl~~~a~~g~IlvS~~~~~~l~~-~~~~~~~~g~~~l 163 (184)
T 1ybt_A 94 ------LGIEVRIGIHAGEVEVRDASHG---TDVAGVAVHIGARVCALAGPSEVLVSSTVRDIVAG-SRHRFAERGEQEL 163 (184)
T ss_dssp ------TTCCEEEEEEEEEEEEEECSSC---EEEESHHHHHHHHHHHHSCTTCEEEEHHHHHHTTT-SSCCEEEEEEECC
T ss_pred ------cCCcEEEEEEEeEEEEEecCCC---ceEECcHHHHHHHHHhcCCCCEEEECHHHHHhhcc-cCceEEEcCCEEe
Confidence 1149999999999999977653 99999999999999999999999999999999843 3577777788888
Q ss_pred eeeeee-cEEEEE
Q psy7403 248 KVETIG-DAYMVV 259 (368)
Q Consensus 248 K~ktig-d~Y~~~ 259 (368)
||+... ..|.+.
T Consensus 164 kG~~~~~~vy~l~ 176 (184)
T 1ybt_A 164 KGVPGRWRLCVLM 176 (184)
T ss_dssp TTSSSCEEEEEEC
T ss_pred cCCCCcEEEEEEe
Confidence 997644 556554
No 13
>3mr7_A Adenylate/guanylate cyclase/hydrolase, alpha/beta family; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.60A {Ruegeria pomeroyi}
Probab=99.92 E-value=8.7e-26 Score=197.81 Aligned_cols=169 Identities=17% Similarity=0.098 Sum_probs=136.6
Q ss_pred cccCceEEEeeccCCchhhccCCChHHHHHHHHHHHHH-HhhhhhcccceeEEEEeecceEEEeeccccccccchhhHHH
Q psy7403 15 ETYDSVTIYFSDIVGFTSLSAESTPLQVVELLNDLYTC-FDSVIENFDVYKVIFVVLSEIYSISLAALDYESNNILDNLL 93 (368)
Q Consensus 15 ~~~~~vtilf~di~gft~ls~~~~~~~~~~~Ln~~f~~-~~~~i~~~~~~~~~~~~~Gd~~~~~~~g~~~~~~~~~~~~~ 93 (368)
.+++++||||+||+|||.+++.++|+.+ ..|+++|.. +++++.+|+|++++++ ||+||+ +||.| ..+
T Consensus 3 ~e~r~vtvlf~Di~gft~l~~~~~~~~~-~~l~~~~~~~~~~~i~~~~G~v~k~~--GD~~~a-~f~~~--------~~A 70 (189)
T 3mr7_A 3 AERRLCAILAADMAGYSRLMERNETDVL-NRQKLYRRELIDPAIAQAGGQIVKTT--GDGMLA-RFDTA--------QAA 70 (189)
T ss_dssp CEEEEEEEEEEEECCCCGGGCCCCHHHH-HHHHHHHHHTHHHHHHHTTCEEEEEE--TTEEEE-EESSH--------HHH
T ss_pred CcEEEEEEEEEEchhhHHHHhhCCHHHH-HHHHHHHHHHHHHHHHHcCCEEEEEe--CCEEEE-EeCCH--------HHH
Confidence 4678999999999999999999888766 677887776 9999999999999999 999999 98853 345
Q ss_pred HHHHHhhhhHHHHHHHhhhhhHHHHHhHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Q psy7403 94 SRMEQYANNLEALVEERTADYLEEKRKCEELLYQLLPKDYESNNILDNLLSRMEQYANNLEALVEERTADYLEEKRKCEE 173 (368)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~e~~~~~L~~~~~~~t~~l~~e~~~~~~ 173 (368)
+++|+ +|+..+ .+++........
T Consensus 71 ~~~Al------------------------~i~~~l---------------------------------~~~~~~~~~~~~ 93 (189)
T 3mr7_A 71 LRCAL------------------------EIQQAM---------------------------------QQREEDTPRKER 93 (189)
T ss_dssp HHHHH------------------------HHHHHH---------------------------------HHHTTTSCGGGC
T ss_pred HHHHH------------------------HHHHHH---------------------------------HHHhhhcccCCc
Confidence 56666 555555 333322222233
Q ss_pred hhhhcCCCCCCCCccccccccccceeEEeccccccchhhhhcccccccccchhHHHHhhhccchhhhhhccccceeeeee
Q psy7403 174 LLYQLLPNCYQGPCVAGVVGLKMPRYCLFGDTVNTASRMESNGQALKIHVSPFTKEVLDTFGTFDLELRGEVEMKVETIG 253 (368)
Q Consensus 174 Ll~~i~pgi~~G~v~~G~iG~~~~~~~lfgd~Vnfa~rles~~~~~~I~is~~~~~l~~~~~~fd~~~~~~~~~K~ktig 253 (368)
+ ++++|+|+|+++.| .|++|||+||.|+||++.+.+++|++|+.++.++.....|.+...+...+||+...
T Consensus 94 l--~~riGi~~G~v~~g-------~~~~~G~~Vn~AaRl~~~a~~~~I~vs~~~~~~l~~~~~~~~~~~g~~~lkG~~~~ 164 (189)
T 3mr7_A 94 I--QYRIGINIGDIVLE-------DGDIFGDAVNVAARLEAISEPGAICVSDIVHQITQDRVSEPFTDLGLQKVKNITRP 164 (189)
T ss_dssp C--CEEEEEEEEEEEEC-------SSCEESHHHHHHHHHHHHSCTTCEEEEHHHHHHHTTTCCSCCEEEEEEEETTEEEE
T ss_pred e--eEEEEEEEEEEEEE-------CCeEEChHHHHHHHHHhhCCCCeEEECHHHHHhhccccCceEEECCCEEeCCcCCc
Confidence 4 99999999999988 57999999999999999999999999999999998654577788888888998764
Q ss_pred -cEEEEEec
Q psy7403 254 -DAYMVVSG 261 (368)
Q Consensus 254 -d~Y~~~~g 261 (368)
..|.+...
T Consensus 165 v~vy~~~~~ 173 (189)
T 3mr7_A 165 IRVWQWVPD 173 (189)
T ss_dssp EEEEEECCC
T ss_pred EEEEEEccc
Confidence 56666543
No 14
>1ab8_A Adenylyl cyclase; lyase, complex (transferase-inhibitor); HET: FOK; 2.20A {Rattus norvegicus} SCOP: d.58.29.1 PDB: 1azs_B* 1cjk_B* 1cjt_B* 1cju_B* 1cjv_B* 1cs4_B* 1tl7_B* 1u0h_B* 2gvd_B* 2gvz_B* 3c14_B* 3c15_B* 3c16_B* 3e8a_B* 3g82_B* 3maa_B* 1cul_B*
Probab=99.92 E-value=2.6e-25 Score=199.47 Aligned_cols=156 Identities=20% Similarity=0.240 Sum_probs=122.2
Q ss_pred eeEEeccccccchhhhhccc---ccccccchhHHHHhhhccchhhhhhcc---ccceeeeeecEEEEEecCCCC------
Q psy7403 198 RYCLFGDTVNTASRMESNGQ---ALKIHVSPFTKEVLDTFGTFDLELRGE---VEMKVETIGDAYMVVSGLPMR------ 265 (368)
Q Consensus 198 ~~~lfgd~Vnfa~rles~~~---~~~I~is~~~~~l~~~~~~fd~~~~~~---~~~K~ktigd~Y~~~~g~p~~------ 265 (368)
.+++|.|+++||...+.... |.. .+..|++.|..|+.....+ ..+|+|++||+||+++|.|..
T Consensus 15 vtvlF~DI~gfT~l~~~l~~~~~p~~-----~~~~Ln~~~~~~~~~i~~~~~~g~~~ik~iGD~~ma~fg~p~~~~~~~~ 89 (220)
T 1ab8_A 15 VCVMFASIPDFKEFYTESDVNKEGLE-----CLRLLNEIIADFDDLLSKPKFSGVEKIKTIGSTYMAATGLSAIPSQEHA 89 (220)
T ss_dssp EEEEEEECTTHHHHCCCSTTTTTTHH-----HHHHHHHHHHHHHGGGGSGGGTTEEEEEEETTEEEEEECCCCSCCC---
T ss_pred EEEEEEEccchHHHHHhcCCCCCHHH-----HHHHHHHHHHHHHHHHHhhccCCeEEEEEeCceEEEEECCCcccccccc
Confidence 48999999999987665532 322 2456777888888888765 678999999999999999872
Q ss_pred ----CCChhHHHHHHHHHHHHHHHhhcccCCCCCCcceEEEeecCCCcce---------ecccCChHhHHHHHHcCCCCC
Q psy7403 266 ----NGNLHAREIARMSLALLDTVVTFTIRHRPTDQLKLRIGMHTGCRDK---------FRDQSSFVSVASQLILGQSVV 332 (368)
Q Consensus 266 ----~~~~ha~~~~~~al~~~~~~~~~~~~~~~~~~l~iRIGihtG~v~~---------~~~~gd~vn~A~rles~~~~~ 332 (368)
...+|+.+++.+|++|++.+..++.. ...++++|||||||+|+. |++|||+||+|+|||+.+.++
T Consensus 90 ~~~~~~~~~a~~a~~~Al~~~~~l~~~~~~--~~~~l~~rIGIh~G~v~~G~iG~~r~~y~v~Gd~VN~AaRle~~a~~g 167 (220)
T 1ab8_A 90 QEPERQYMHIGTMVEFAYALVGKLDAINKH--SFNDFKLRVGINHGPVIAGVIGAQKPQYDIWGNTVNVASRMDSTGVLD 167 (220)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHHHHHTT--TTCCCCCEEEEEEEEEEEEEECSSSCEEEEESHHHHHHHHHHHTCCTT
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHhhc--cCCceEEEEEEEeeeEEEEeecCCceeEEEECcHHHHHHHHHhcCCCC
Confidence 12589999999999999999998743 467899999999999986 899999999999999999999
Q ss_pred ceeecceeeeeecccCcccccC-CCCccccccccccC
Q psy7403 333 AETYDSVTIYFSDIVGFTSLSA-ESTPELRGEVEMKE 368 (368)
Q Consensus 333 ~~~~~~~t~~f~~~~~f~~~~~-~~~~~~~~~~~~k~ 368 (368)
.+++|+.|... +.. .+..+++|++.||.
T Consensus 168 ~I~vS~~~~~~--------l~~~~~~~~~~g~~~lKG 196 (220)
T 1ab8_A 168 KIQVTEETSLI--------LQTLGYTCTCRGIINVKG 196 (220)
T ss_dssp CEEECHHHHHH--------HHHHTCCCCC--------
T ss_pred eEEECHHHHHH--------hhcCceEEEEeccEEecC
Confidence 99999999444 333 34578889999984
No 15
>1y10_A Hypothetical protein RV1264/MT1302; adenylyl cyclase fold, lyase; HET: 1PE; 2.30A {Mycobacterium tuberculosis} PDB: 1y11_A*
Probab=99.91 E-value=2.5e-25 Score=215.23 Aligned_cols=180 Identities=19% Similarity=0.057 Sum_probs=133.8
Q ss_pred HHHHhhhHHhhhhcCC-------CCCCCCccccc------cc---------cccceeEEeccccccchhhhhcccccccc
Q psy7403 165 LEEKRKCEELLYQLLP-------NCYQGPCVAGV------VG---------LKMPRYCLFGDTVNTASRMESNGQALKIH 222 (368)
Q Consensus 165 ~~e~~~~~~Ll~~i~p-------gi~~G~v~~G~------iG---------~~~~~~~lfgd~Vnfa~rles~~~~~~I~ 222 (368)
.+++++++.||++|+| ...+.++..+. .+ ..+..+++|+|+++||...+... |..+
T Consensus 161 ~ee~~kse~LL~~iLP~L~~~l~~~va~~L~~~~~~~~v~~~~r~~~~~~~~~~~vTVlFaDIvgFT~ls~~~~-p~ev- 238 (407)
T 1y10_A 161 LDIAKGSQALVSQIVPLLGPMIQDMLFMQLRHMMETEAVNAGERAAGKPLPGARQVTVAFADLVGFTQLGEVVS-AEEL- 238 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCTTCEEEEEEEEEECSBCTTSCBCC-HHHH-
T ss_pred HhHHHHHHHHHHHhcccccccchHHHHHHHHhcccchhhhhhhhcccccccceeeEEEEEEEccCchHHHhhCC-HHHH-
Confidence 4567888999999999 44444333331 11 12334999999999998655443 3332
Q ss_pred cchhHHHHhhhccchhhhhhccccceeeeeecEEEEEecCCCCCCChhHHHHHHHHHHHHHHHhhcccCCCCCCcceEEE
Q psy7403 223 VSPFTKEVLDTFGTFDLELRGEVEMKVETIGDAYMVVSGLPMRNGNLHAREIARMSLALLDTVVTFTIRHRPTDQLKLRI 302 (368)
Q Consensus 223 is~~~~~l~~~~~~fd~~~~~~~~~K~ktigd~Y~~~~g~p~~~~~~ha~~~~~~al~~~~~~~~~~~~~~~~~~l~iRI 302 (368)
+..|+..+..|+.... +..+|+|++||+||+++|.|. +++.+|++|++.+..++ .++++||
T Consensus 239 ----v~lLn~~~~~~~~i~~-~~g~~iKtiGDa~mavfg~p~--------~a~~~Al~m~~~l~~~~------~~l~iRI 299 (407)
T 1y10_A 239 ----GHLAGRLAGLARDLTA-PPVWFIKTIGDAVMLVCPDPA--------PLLDTVLKLVEVVDTDN------NFPRLRA 299 (407)
T ss_dssp ----HHHHHHHHHHHHHHCC-TTCEEEEEETTEEEEEESSHH--------HHHHHHHHHHHHHHTCT------TSCCEEE
T ss_pred ----HHHHHHHHHHHHHHHH-cCcEEEEEecceEEEEECCHH--------HHHHHHHHHHHHHHHhC------CCceEEE
Confidence 3455665665666554 678999999999999999764 47899999999988753 3579999
Q ss_pred eecCCCcce--ecccCChHhHHHHHHcCCCCCceeecceeeeeecccCcccccCCCCccccccccccC
Q psy7403 303 GMHTGCRDK--FRDQSSFVSVASQLILGQSVVAETYDSVTIYFSDIVGFTSLSAESTPELRGEVEMKE 368 (368)
Q Consensus 303 GihtG~v~~--~~~~gd~vn~A~rles~~~~~~~~~~~~t~~f~~~~~f~~~~~~~~~~~~~~~~~k~ 368 (368)
|||||+|+. ||+|||+||+|+|||+.++++.|++|+.|+....... ....+..+++|++.||.
T Consensus 300 GIhtG~Vv~Gvydv~GdtVN~AsRLes~a~~g~I~vS~~t~~~l~~~~---~~~~f~~~~~G~v~lKG 364 (407)
T 1y10_A 300 GVASGMAVSRAGDWFGSPVNVASRVTGVARPGAVLVADSVREALGDAP---EADGFQWSFAGPRRLRG 364 (407)
T ss_dssp EEEEEEEEEETTEEEEHHHHHHHHHHHHCCTTCEEEEHHHHHSCCCC------CCCEEEEEEEECCTT
T ss_pred EEEEEEEEEecCccCCCHHHHHHHHHhcCCCCeEEECHHHHHHHhccc---ccCceEEEEeceEEeCC
Confidence 999999998 9999999999999999999999999999954433310 00134478999999984
No 16
>3uvj_A Guanylate cyclase soluble subunit alpha-3; nitric oxide, structural genomics, structural genomics conso SGC, CGMP biosynthesis; 2.08A {Homo sapiens}
Probab=99.91 E-value=5.1e-25 Score=198.21 Aligned_cols=155 Identities=24% Similarity=0.252 Sum_probs=130.9
Q ss_pred cceeEEeccccccchhhhhcccccccccchhHHHHhhhccchhhhhhccccceeeeeecEEEEEecCCCCCCChhHHHHH
Q psy7403 196 MPRYCLFGDTVNTASRMESNGQALKIHVSPFTKEVLDTFGTFDLELRGEVEMKVETIGDAYMVVSGLPMRNGNLHAREIA 275 (368)
Q Consensus 196 ~~~~~lfgd~Vnfa~rles~~~~~~I~is~~~~~l~~~~~~fd~~~~~~~~~K~ktigd~Y~~~~g~p~~~~~~ha~~~~ 275 (368)
+..+++|.|+++||...+... |.. .+..|+..|..|+.....+..+++|++||+||+++|+|.+. .+|+.+++
T Consensus 13 ~~vtvlF~Di~gfT~l~~~~~-~~~-----~~~~ln~~~~~~~~~i~~~~g~v~k~~GD~~ma~fg~p~~~-~~~a~~a~ 85 (225)
T 3uvj_A 13 SNVTMLFSDIVGFTAICSQCS-PLQ-----VITMLNALYTRFDQQCGELDVYKVETIGDAYCVAGGLHKES-DTHAVQIA 85 (225)
T ss_dssp EEEEEEEEEETTHHHHHHHSC-HHH-----HHHHHHHHHHHHHHHHHHHTCEEECCSTTCEEEEESSSSCC-TTHHHHHH
T ss_pred ceEEEEEEEccChHHHHhcCC-HHH-----HHHHHHHHHHHHHHHHHhcCeEEEEeeCcEEEEEECCCCCc-hHHHHHHH
Confidence 335999999999998766543 322 24566777788888888999999999999999999999988 68999999
Q ss_pred HHHHHHHHHHhhcccCCCCCCcceEEEeecCCCcce---------ecccCChHhHHHHHHcCCCCCceeecceeeeeecc
Q psy7403 276 RMSLALLDTVVTFTIRHRPTDQLKLRIGMHTGCRDK---------FRDQSSFVSVASQLILGQSVVAETYDSVTIYFSDI 346 (368)
Q Consensus 276 ~~al~~~~~~~~~~~~~~~~~~l~iRIGihtG~v~~---------~~~~gd~vn~A~rles~~~~~~~~~~~~t~~f~~~ 346 (368)
.+|++|++.+..++.+ .+.++++|||||||+|+. |++|||+||+|+|||+.+.++.+++|+.|+
T Consensus 86 ~~al~~~~~~~~~~~~--~~~~l~~riGih~G~v~~G~iG~~~~~~~~~Gd~VN~AaRle~~a~~~~I~vS~~~~----- 158 (225)
T 3uvj_A 86 LMALKMMELSDEVMSP--HGEPIKMRIGLHSGSVFAGVVGVKMPRYCLFGNNVTLANKFESCSVPRKINVSPTTY----- 158 (225)
T ss_dssp HHHHHHHHHHTTSBCT--TSCBCCEEEEEEEEEEEEEEECC-CCEEEEESHHHHHHHHHHHTSCTTCEEECHHHH-----
T ss_pred HHHHHHHHHHHHHHhh--cCCceEEEEEEEeccEEEEEecCCCceEEEECcHHHHHHHHHhcCCCCeEEECHHHH-----
Confidence 9999999999988744 457899999999999975 999999999999999999999999999994
Q ss_pred cCcccccC--CCCcccccccccc
Q psy7403 347 VGFTSLSA--ESTPELRGEVEMK 367 (368)
Q Consensus 347 ~~f~~~~~--~~~~~~~~~~~~k 367 (368)
..+.. .+..+++|++.||
T Consensus 159 ---~~l~~~~~~~~~~~g~~~lk 178 (225)
T 3uvj_A 159 ---RLLKDCPGFVFTPRSREELP 178 (225)
T ss_dssp ---HHHTTSTTEEEEECCSTTSC
T ss_pred ---HhhcCCCceEEEEcCcEEec
Confidence 44443 3447888998885
No 17
>2wz1_A Guanylate cyclase soluble subunit beta-1; lyase, GUCY1, metal-binding, CGMP biosynthesis, nucleotide-B cyclase, GUCY1B3, GTP-binding; 1.63A {Homo sapiens} PDB: 3uvj_B
Probab=99.90 E-value=1.4e-24 Score=194.44 Aligned_cols=156 Identities=26% Similarity=0.329 Sum_probs=130.5
Q ss_pred cceeEEeccccccchhhhhccc---ccccccchhHHHHhhhccchhhhhh---ccccceeeeeecEEEEEecCCCCCCCh
Q psy7403 196 MPRYCLFGDTVNTASRMESNGQ---ALKIHVSPFTKEVLDTFGTFDLELR---GEVEMKVETIGDAYMVVSGLPMRNGNL 269 (368)
Q Consensus 196 ~~~~~lfgd~Vnfa~rles~~~---~~~I~is~~~~~l~~~~~~fd~~~~---~~~~~K~ktigd~Y~~~~g~p~~~~~~ 269 (368)
+..+++|.|+++||...+.... |.. .+..|++.|..|+.... .+..+|.|++||+||+++|.|.+. .+
T Consensus 11 ~~vtvlF~DI~gfT~l~e~~~~~~~~~~-----~~~~Ln~~~~~~~~~i~~~~~~~g~~~k~~GD~~ma~fg~p~~~-~~ 84 (219)
T 2wz1_A 11 DNVTILFSGIVGFNAFCSKHASGEGAMK-----IVNLLNDLYTRFDTLTDSRKNPFVYKVETVGDKYMTVSGLPEPC-IH 84 (219)
T ss_dssp EEEEEEEEEETTHHHHHHHSCCC--HHH-----HHHHHHHHHHHHHHHHCTTTCTTCEEECCCTTCEEEEESSSSCC-TT
T ss_pred eeEEEEEEEccCcHHHHHhCCCCCCHHH-----HHHHHHHHHHHHHHHHHhhccCCEEEEeecCCEEEEEECCCCCC-hh
Confidence 3459999999999987776542 222 24556777777887777 678899999999999999999988 68
Q ss_pred hHHHHHHHHHHHHHHHhhcccCCCCCCcceEEEeecCCCcce---------ecccCChHhHHHHHHcCCCCCceeeccee
Q psy7403 270 HAREIARMSLALLDTVVTFTIRHRPTDQLKLRIGMHTGCRDK---------FRDQSSFVSVASQLILGQSVVAETYDSVT 340 (368)
Q Consensus 270 ha~~~~~~al~~~~~~~~~~~~~~~~~~l~iRIGihtG~v~~---------~~~~gd~vn~A~rles~~~~~~~~~~~~t 340 (368)
|+.+++.+|++|++.+..++.. ..++++|||||||+++. |++|||+||+|+||++.+.++.+++|+.|
T Consensus 85 ~a~~A~~~Al~~~~~~~~~~~~---~~~l~~rIGi~~G~v~~G~iG~~~~~~~v~Gd~VN~AaRLe~~a~~~~IlvS~~~ 161 (219)
T 2wz1_A 85 HARSICHLALDMMEIAGQVQVD---GESVQITIGIHTGEVVTGVIGQRMPRYCLFGNTVNLTSRTETTGEKGKINVSEYT 161 (219)
T ss_dssp HHHHHHHHHHHHHHHHTTCEET---TEECCEEEEEEEEEEEEEEECSSSCEEEEESHHHHHHHHHHHTSCTTSEEEEHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCceEEEEEEEEEEEEEEEeCCCceEEEEECHHHHHHHHHHhcCCCCeEEECHHH
Confidence 9999999999999999988742 67899999999999976 89999999999999999999999999999
Q ss_pred eeeecccCccccc------CCCCccccccccccC
Q psy7403 341 IYFSDIVGFTSLS------AESTPELRGEVEMKE 368 (368)
Q Consensus 341 ~~f~~~~~f~~~~------~~~~~~~~~~~~~k~ 368 (368)
|..+. ..+..+++|++.||.
T Consensus 162 --------~~~l~~~~~~~~~~~~~~~g~~~lKG 187 (219)
T 2wz1_A 162 --------YRCLMSPENSDPQFHLEHRGPVSMKG 187 (219)
T ss_dssp --------HHHTTSTTTCCTTEEEEEEEEECCTT
T ss_pred --------HHHHhhhcccCCceEEEEeCCEEecC
Confidence 44443 345578889999984
No 18
>1yk9_A Adenylate cyclase; beta-alpha-beta sandwich, structural genomics, PSI, protein structure initiative; 2.70A {Mycobacterium tuberculosis}
Probab=99.90 E-value=2.4e-24 Score=190.91 Aligned_cols=156 Identities=24% Similarity=0.306 Sum_probs=133.2
Q ss_pred cceeEEeccccccchhhhhcccccccccchhHHHHhhhccchhhhhhccccceeeeeecEEEEEecCCCCCCChhHHHHH
Q psy7403 196 MPRYCLFGDTVNTASRMESNGQALKIHVSPFTKEVLDTFGTFDLELRGEVEMKVETIGDAYMVVSGLPMRNGNLHAREIA 275 (368)
Q Consensus 196 ~~~~~lfgd~Vnfa~rles~~~~~~I~is~~~~~l~~~~~~fd~~~~~~~~~K~ktigd~Y~~~~g~p~~~~~~ha~~~~ 275 (368)
+..+++|.|+++||...+... |..+ +..|++.|..++.....+..++.|++||+||+++|.|.+. .+|+.+++
T Consensus 9 ~~vtvlf~DI~gfT~l~~~~~-~~~~-----~~~ln~~~~~~~~~i~~~gG~v~k~~GD~~ma~fg~p~~~-~~~a~~A~ 81 (204)
T 1yk9_A 9 DEASVLFADIVGFTERASSTA-PADL-----VRFLDRLYSAFDELVDQHGLEKIEVSGDSYMVVSGVPRPR-PDHTQALA 81 (204)
T ss_dssp SCEEEEEEEESCSSCSSCCCC-SSST-----TTHHHHHHTTTTGGGTTSSCEECCCSSSCEEEESCCSSCC-TTHHHHHH
T ss_pred CcEEEEEEEccChHHHHhcCC-HHHH-----HHHHHHHHHHHHHHHHHcCCEEEEEeCCeEEEEECCCCCC-hHHHHHHH
Confidence 345999999999998666543 3333 2457777888999999999999999999999999999888 58999999
Q ss_pred HHHHHHHHHHhhcccCCCCCCcceEEEeecCCCcce---------ecccCChHhHHHHHHcCCCCCceeecceeeeeecc
Q psy7403 276 RMSLALLDTVVTFTIRHRPTDQLKLRIGMHTGCRDK---------FRDQSSFVSVASQLILGQSVVAETYDSVTIYFSDI 346 (368)
Q Consensus 276 ~~al~~~~~~~~~~~~~~~~~~l~iRIGihtG~v~~---------~~~~gd~vn~A~rles~~~~~~~~~~~~t~~f~~~ 346 (368)
.+|++|++.+..++.+ .+.++++|||||||+++. |++|||+||+|+||++.+.++.+++++.|
T Consensus 82 ~~Al~~~~~~~~~~~~--~~~~l~~rIGI~tG~v~~g~vG~~r~~~~v~G~~Vn~AaRle~~a~~g~I~vs~~~------ 153 (204)
T 1yk9_A 82 DFALDMTNVAAQLKDP--RGNPVPLRVGLATGPVVAGVVGSRRFRYCVWGDAVNVASRMESTDSVGQIQVPDEV------ 153 (204)
T ss_dssp THHHHHHHHTTTCCSS--SCCCCCEEEEEEEECEEECCCCSSSCCCCEEEHHHHHTTHHHHSCSTTCEEBCHHH------
T ss_pred HHHHHHHHHHHHHHhc--cCCCceEEEEEEeeEEEEEEecCCCceEEEEChHHHHHHHHHhcCCCCeEEECHHH------
Confidence 9999999999988754 457899999999999975 99999999999999999999999999999
Q ss_pred cCcccccCCCCccccccccccC
Q psy7403 347 VGFTSLSAESTPELRGEVEMKE 368 (368)
Q Consensus 347 ~~f~~~~~~~~~~~~~~~~~k~ 368 (368)
|..+...+..+++|++.+|.
T Consensus 154 --~~~l~~~~~~~~~g~~~lkG 173 (204)
T 1yk9_A 154 --YERLKDDFVLRERGHINVKG 173 (204)
T ss_dssp --HHCCTTCEEEEECCCCCCSS
T ss_pred --HHHhhcCeeEEEcceEEecC
Confidence 55555566678889999884
No 19
>3et6_A Soluble guanylyl cyclase beta; guanylate cyclase, dimethylarsenic, lyase, membrane, transmembrane; 2.55A {Chlamydomonas reinhardtii} PDB: 3et6_B
Probab=99.90 E-value=2.8e-24 Score=188.32 Aligned_cols=157 Identities=22% Similarity=0.286 Sum_probs=129.7
Q ss_pred ccceeEEeccccccchhhhhcccccccccchhHHHHhhhccchhhhhhcc-ccceeeeeecEEEEEecCCCCCCChhHHH
Q psy7403 195 KMPRYCLFGDTVNTASRMESNGQALKIHVSPFTKEVLDTFGTFDLELRGE-VEMKVETIGDAYMVVSGLPMRNGNLHARE 273 (368)
Q Consensus 195 ~~~~~~lfgd~Vnfa~rles~~~~~~I~is~~~~~l~~~~~~fd~~~~~~-~~~K~ktigd~Y~~~~g~p~~~~~~ha~~ 273 (368)
.+..+++|.|+++|+...+... |.. .+..+++.|..|+.....+ +.+++|++||+||+++|.|.+. .+|+.+
T Consensus 7 ~~~vtvlf~Di~gft~l~~~~~-~~~-----~~~~l~~~~~~~~~~i~~~~g~~~vk~~GD~~~a~fg~~~~~-~~~~~~ 79 (190)
T 3et6_A 7 HPEATVLFSDIVGFTEIASRSS-PLE-----VXSLLDELYQRFDAAIEEYPQLYKVETIGDAYMVVCNVTVPC-DDHADV 79 (190)
T ss_dssp EEEEEEEEEEETTHHHHTTTSC-HHH-----HHHHHHHHHHHHHHHGGGCTTEEEEECTTSCEEEEESSSSCC-STHHHH
T ss_pred cceEEEEEeEecChhHhHhhCC-HHH-----HHHHHHHHHHHHHHHHHHcCCEEEEEEeCCEEEEEECCCCCc-hhHHHH
Confidence 3445999999999998666543 222 2455667777888888888 8889999999999999999987 689999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCcceEEEeecCCCcce---------ecccCChHhHHHHHHcCCCCCceeecceeeeee
Q psy7403 274 IARMSLALLDTVVTFTIRHRPTDQLKLRIGMHTGCRDK---------FRDQSSFVSVASQLILGQSVVAETYDSVTIYFS 344 (368)
Q Consensus 274 ~~~~al~~~~~~~~~~~~~~~~~~l~iRIGihtG~v~~---------~~~~gd~vn~A~rles~~~~~~~~~~~~t~~f~ 344 (368)
++.+|++|++.+..++.+ ...++++|||||||+++. |++|||+||+|+||++.+.++.+++|+.|
T Consensus 80 a~~~al~~~~~~~~~~~~--~~~~l~~riGi~~G~v~~g~vG~~~~~~~v~G~~Vn~Aarl~~~a~~~~I~vs~~~---- 153 (190)
T 3et6_A 80 LLEFALRMHEEASRVASS--LGEPVRIRVGMHSGPVVAGVVGRKMPRFXLFGDTVNTASRMESHGEAGQIHISEAC---- 153 (190)
T ss_dssp HHHHHHHHHHHHHTSCCC-----CCCEEEEEEEEEEEEEEECSSSCEEEEESHHHHHHHHHHHTSCTTSEEEEHHH----
T ss_pred HHHHHHHHHHHHHHHHhc--cCCCceEEEEEEeccEEEEecCCCcceEEecCcchhHHHHHHhcCCCCeEEECHHH----
Confidence 999999999999988643 457899999999999975 89999999999999999999999999999
Q ss_pred cccCcccccC--CCCccccccccccC
Q psy7403 345 DIVGFTSLSA--ESTPELRGEVEMKE 368 (368)
Q Consensus 345 ~~~~f~~~~~--~~~~~~~~~~~~k~ 368 (368)
|..+.. .+..+++|++.||.
T Consensus 154 ----~~~l~~~~~~~~~~~g~~~lkG 175 (190)
T 3et6_A 154 ----YCCLRSKERFEIRERGNITVKG 175 (190)
T ss_dssp ----HHHCSCGGGTCCCCEEEECCSS
T ss_pred ----HHHhCcCCceEEEEcCCEEecC
Confidence 444443 45578899999984
No 20
>1azs_A VC1; complex (lyase/hydrolase), hydrolase, signal transducing protein, cyclase, effector enzyme; HET: GSP FKP; 2.30A {Canis lupus familiaris} SCOP: d.58.29.1 PDB: 1cs4_A* 1u0h_A* 2gvd_A* 2gvz_A* 3c14_A* 3c15_A* 3c16_A* 3e8a_A* 3g82_A* 3maa_A* 1cul_A* 1cjk_A* 1cju_A* 1cjv_A* 1cjt_A* 1tl7_A*
Probab=99.89 E-value=9.2e-24 Score=188.97 Aligned_cols=148 Identities=21% Similarity=0.271 Sum_probs=125.6
Q ss_pred cceeEEeccccccchhhhhcccccccccchhHHHHhhhccchhhhhhccccceeeeeecEEEEEecCCCCCCChhHHHHH
Q psy7403 196 MPRYCLFGDTVNTASRMESNGQALKIHVSPFTKEVLDTFGTFDLELRGEVEMKVETIGDAYMVVSGLPMRNGNLHAREIA 275 (368)
Q Consensus 196 ~~~~~lfgd~Vnfa~rles~~~~~~I~is~~~~~l~~~~~~fd~~~~~~~~~K~ktigd~Y~~~~g~p~~~~~~ha~~~~ 275 (368)
+..+++|.|+++||...+... |. +.+..|++.|..|+.....+..+++|++||+||+++|.|.+. .+|+.+++
T Consensus 33 ~~vtvlF~DI~gfT~l~e~~~-~~-----~~~~~Ln~~~~~~~~~i~~~gG~v~k~iGD~~ma~fg~p~~~-~~~a~~Av 105 (220)
T 1azs_A 33 DNVSILFADIEGFTSLASQCT-AQ-----ELVMTLNELFARFDKLAAENHCLRIKILGDCYYCVSGLPEAR-ADHAHCCV 105 (220)
T ss_dssp EEEEEEEEEEETHHHHHHHSC-HH-----HHHHHHHHHHHHHHHHHHHHTEEEEEEETTEEEEEESCSSCC-STHHHHHH
T ss_pred ccEEEEEEEccChHHHHhhCC-HH-----HHHHHHHHHHHHHHHHHHHcCcEEEEEeCCeEEEEECCCCCC-hHHHHHHH
Confidence 345899999999998766543 22 224567777888898889999999999999999999999987 68999999
Q ss_pred HHHHHHHHHHhhcccCCCCCCcceEEEeecCCCcce---------ecccCChHhHHHHHHcCCCCCceeecceeeeeecc
Q psy7403 276 RMSLALLDTVVTFTIRHRPTDQLKLRIGMHTGCRDK---------FRDQSSFVSVASQLILGQSVVAETYDSVTIYFSDI 346 (368)
Q Consensus 276 ~~al~~~~~~~~~~~~~~~~~~l~iRIGihtG~v~~---------~~~~gd~vn~A~rles~~~~~~~~~~~~t~~f~~~ 346 (368)
.+|++|++.+..++.. .+.++++|||||||+|+. |++|||+||+|+||++.+.++.+++|+.|
T Consensus 106 ~~Al~m~~~l~~~~~~--~~~~l~irIGI~tG~v~~G~vG~~~~~y~v~Gd~VN~AaRLe~~a~~g~IlvS~~t------ 177 (220)
T 1azs_A 106 EMGMDMIEAISLVREM--TGVNVNMRVGIHSGRVHCGVLGLRKWQFDVWSNDVTLANHMEAGGKAGRIHITKAT------ 177 (220)
T ss_dssp HHHHHHHHHHHHHHHH--HCSCCEEEEEEEEEEEEEEECSSSSCCCEEESHHHHHHHHHHHTCCTTSEEECSTT------
T ss_pred HHHHHHHHHHHHHHhh--cCCCcEEEEEEEEeEEEEEEeCCCCcEEEEEchHHHHHHHHHhcCCCCeEEECHHH------
Confidence 9999999999988743 356899999999999977 99999999999999999999999999999
Q ss_pred cCcccccCCCCccc
Q psy7403 347 VGFTSLSAESTPEL 360 (368)
Q Consensus 347 ~~f~~~~~~~~~~~ 360 (368)
|..+.+.+..++
T Consensus 178 --~~~l~~~f~~~~ 189 (220)
T 1azs_A 178 --LSYLNGDYEVEP 189 (220)
T ss_dssp --TTTTTTCSCEEE
T ss_pred --HHhhcCceEEEE
Confidence 555555555655
No 21
>2w01_A Adenylate cyclase; guanylyl cyclase, class III nucleotidyl cyclase, lyase; 2.31A {Synechocystis SP}
Probab=99.88 E-value=1.9e-23 Score=185.75 Aligned_cols=159 Identities=16% Similarity=0.082 Sum_probs=131.2
Q ss_pred ccceeEEeccccccchhhhhcccccccccchhHHHHhhhccchhhhhhccccceeeeeecEEEEEecCCCCCCChhHHHH
Q psy7403 195 KMPRYCLFGDTVNTASRMESNGQALKIHVSPFTKEVLDTFGTFDLELRGEVEMKVETIGDAYMVVSGLPMRNGNLHAREI 274 (368)
Q Consensus 195 ~~~~~~lfgd~Vnfa~rles~~~~~~I~is~~~~~l~~~~~~fd~~~~~~~~~K~ktigd~Y~~~~g~p~~~~~~ha~~~ 274 (368)
.+..+++|.|+++||...+... |.. .+..++..|..++.....+..++.|++||+||+++|.|.+. .+|+.++
T Consensus 12 ~~~vtvlf~Di~gfT~l~~~~~-~~~-----~~~~l~~~~~~~~~~i~~~~G~v~k~~GD~~~a~fg~p~~~-~~~a~~A 84 (208)
T 2w01_A 12 RRPITILTSDLRGFTSTSEGLN-PEE-----VVKVLNIYFGKMADVITHHGGTIDEFMGDGILVLFGAPTSQ-QDDALRA 84 (208)
T ss_dssp EEEEEEEEEECTTHHHHGGGSC-HHH-----HHHHHHHHHHHHHHHHHHTTCEEEEEETTEEEEEESSSSCC-TTHHHHH
T ss_pred EEEEEEEEEEecChHHHHhhCC-HHH-----HHHHHHHHHHHHHHHHHHcCCEEEEEEcCEEEEEECCCCCC-hhHHHHH
Confidence 4446999999999998666543 222 23456677777888888888899999999999999999888 6899999
Q ss_pred HHHHHHHHHHHhhcccCC--CCCCcceEEEeecCCCcce----------ecccCChHhHHHHHHcCCCCCceeecceeee
Q psy7403 275 ARMSLALLDTVVTFTIRH--RPTDQLKLRIGMHTGCRDK----------FRDQSSFVSVASQLILGQSVVAETYDSVTIY 342 (368)
Q Consensus 275 ~~~al~~~~~~~~~~~~~--~~~~~l~iRIGihtG~v~~----------~~~~gd~vn~A~rles~~~~~~~~~~~~t~~ 342 (368)
+.+|++|++.+..++..+ ....++++|||||||+++. |++|||+||+|+||++.+.++.+.+|+.|
T Consensus 85 v~~Al~~~~~l~~~~~~~~~~~~~~l~~riGi~~G~v~~g~vG~~~r~~~~v~G~~Vn~AaRl~~~a~~~~I~vs~~~-- 162 (208)
T 2w01_A 85 VACGVEMQLALREVNQQVTGLGLQPLEMGIGINTGEVVVGNIGSEKRTKYGVVGAQVNLTYRIESYTTGGQIFISSTT-- 162 (208)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCCCCCCEEEEEEEEEEEEEEECSSCEEEEEESHHHHHHHHHHHTCCTTCEEEEHHH--
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCceEEEEEEEeeEEEEEEeCCCCeeEEEEECHHHHHHHHHHccCCCCeEEECHHH--
Confidence 999999999998876432 2346899999999999875 89999999999999999999999999999
Q ss_pred eecccCcccccCCCCccccccccccC
Q psy7403 343 FSDIVGFTSLSAESTPELRGEVEMKE 368 (368)
Q Consensus 343 f~~~~~f~~~~~~~~~~~~~~~~~k~ 368 (368)
|..+...+...+.|++.+|.
T Consensus 163 ------~~~l~~~~~~~~~~~~~lkG 182 (208)
T 2w01_A 163 ------LEAAGDRVHVNGNRTVQPKG 182 (208)
T ss_dssp ------HHHHCTTEEEEEEEEECCTT
T ss_pred ------HHhhhcceEecccceEeecC
Confidence 55555555677788888874
No 22
>3r5g_A CYAB; adenylyl cyclase, lyase; 1.50A {Pseudomonas aeruginosa} SCOP: d.58.29.0
Probab=99.88 E-value=1.6e-23 Score=184.56 Aligned_cols=161 Identities=18% Similarity=0.165 Sum_probs=132.8
Q ss_pred cccceeEEeccccccchhhhhcccccccccchhHHHHhhhccchhhhhhccccceeeeeecEEEEEecCCCCCC-ChhHH
Q psy7403 194 LKMPRYCLFGDTVNTASRMESNGQALKIHVSPFTKEVLDTFGTFDLELRGEVEMKVETIGDAYMVVSGLPMRNG-NLHAR 272 (368)
Q Consensus 194 ~~~~~~~lfgd~Vnfa~rles~~~~~~I~is~~~~~l~~~~~~fd~~~~~~~~~K~ktigd~Y~~~~g~p~~~~-~~ha~ 272 (368)
..+..+++|.|+++|+...+... |.. .+..++..|..++.....+..++.|++||+||+++|.|...+ .+|+.
T Consensus 6 e~~~vtvlf~Di~gft~l~~~~~-~~~-----~~~~l~~~~~~~~~~i~~~~G~v~k~~GD~~~a~fg~p~~~~~~~~a~ 79 (198)
T 3r5g_A 6 QRKKLTVFFSDIRGFTELSEELE-AEA-----LTDLLNNYLNEMSKIALKYGGTIDKFVGDCVMVFFGDPSTQGAKKDAV 79 (198)
T ss_dssp EEEEEEEEEEEEETHHHHHTTSC-HHH-----HHHHHHHHHHHHHHHHHHHTCEEEEEETTEEEEEESSSSCSCHHHHHH
T ss_pred eEEEEEEEEEEccccchhhhhCC-HHH-----HHHHHHHHHHHHHHHHHHcCCEEEeeeCCEEEEEECCCcccccHHHHH
Confidence 34456999999999998666543 222 234566677778888888888999999999999999998753 46899
Q ss_pred HHHHHHHHHHHHHhhcccCCC---CCCcceEEEeecCCCcce----------ecccCChHhHHHHHHcCCCCCceeecce
Q psy7403 273 EIARMSLALLDTVVTFTIRHR---PTDQLKLRIGMHTGCRDK----------FRDQSSFVSVASQLILGQSVVAETYDSV 339 (368)
Q Consensus 273 ~~~~~al~~~~~~~~~~~~~~---~~~~l~iRIGihtG~v~~----------~~~~gd~vn~A~rles~~~~~~~~~~~~ 339 (368)
+++.+|++|++.+..++..+. ...++++|||||||+++. |++|||+||+|+||++.+.++.+.+|+.
T Consensus 80 ~a~~~al~i~~~~~~~~~~~~~~~~~~~l~~riGi~~G~v~~g~vG~~~~~~~~v~G~~Vn~Aarl~~~a~~~~I~vs~~ 159 (198)
T 3r5g_A 80 AAVSMGIAMRKHMKVLRQQWRAQGITKPLEIRMGINTGYCTVGNFGADTRMDYTIIGREVNLASRLESASEAGEILISHE 159 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCCSCCEEEEEEEEEEEEEEEEEETTEEEEEEESHHHHHHHHHHHHCCTTCEEEEHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEEEEEEEEEEEEeCCCcceEEEEECcHHHHHHHHHhhCCCCcEEECHH
Confidence 999999999999988764322 236799999999999865 9999999999999999999999999999
Q ss_pred eeeeecccCcccccCCCCccccccccccC
Q psy7403 340 TIYFSDIVGFTSLSAESTPELRGEVEMKE 368 (368)
Q Consensus 340 t~~f~~~~~f~~~~~~~~~~~~~~~~~k~ 368 (368)
| |..+...+..+++|++.+|.
T Consensus 160 ~--------~~~l~~~~~~~~~g~~~lkG 180 (198)
T 3r5g_A 160 T--------YSLIKDVIMCRDKGQIAVKG 180 (198)
T ss_dssp H--------HHHHTTTSCEEEEEEECCTT
T ss_pred H--------HHHhhcCceEEEcccEEeec
Confidence 9 66666777788999999984
No 23
>1wc3_A Adenylate cyclase; soluble adenylyl cyclase, CAMP signaling, lyase; HET: APC; 1.9A {Spirulina platensis} SCOP: d.58.29.1 PDB: 1wc0_A* 1wc4_A* 1wc5_A* 2bw7_A* 1wc1_A* 1wc6_A*
Probab=99.86 E-value=1.1e-22 Score=182.12 Aligned_cols=160 Identities=16% Similarity=0.161 Sum_probs=127.2
Q ss_pred cccceeEEeccccccchhhhhcccccccccchhHHHHhhhccchhhhhhccccceeeeeecEEEEEecCCCCCC-ChhHH
Q psy7403 194 LKMPRYCLFGDTVNTASRMESNGQALKIHVSPFTKEVLDTFGTFDLELRGEVEMKVETIGDAYMVVSGLPMRNG-NLHAR 272 (368)
Q Consensus 194 ~~~~~~~lfgd~Vnfa~rles~~~~~~I~is~~~~~l~~~~~~fd~~~~~~~~~K~ktigd~Y~~~~g~p~~~~-~~ha~ 272 (368)
..+..+++|.|+++||...+... |.. .+..+++.|..++.....+...+.|++||+||+++|.|...+ .+|+.
T Consensus 24 e~~~vtvlF~DI~gfT~l~~~~~-~~~-----~~~~Ln~~~~~~~~~i~~~gG~v~k~iGD~~ma~fg~p~~~~~~~~a~ 97 (219)
T 1wc3_A 24 EPRLITILFSDIVGFTRMSNALQ-SQG-----VAELLNEYLGEMTRAVFENQGTVDKFVGDAIMALYGAPEEMSPSEQVR 97 (219)
T ss_dssp EEEEEEEEEEEEESHHHHHHTSC-HHH-----HHHHHHHHHHHHHHHHHHTTCEEEEEETTEEEEEESSSSCCCHHHHHH
T ss_pred ceeEEEEEEEEecChHHHHhhCC-HHH-----HHHHHHHHHHHHHHHHHHcCCEEEEEEcCeEEEEECCCCCCCChHHHH
Confidence 34446999999999998666543 222 234566677778888888888889999999999999997642 46899
Q ss_pred HHHHHHHHHHHHHhhcccCC--------CCCCcceEEEeecCCCcce----------ecccCChHhHHHHHHcCCCCCce
Q psy7403 273 EIARMSLALLDTVVTFTIRH--------RPTDQLKLRIGMHTGCRDK----------FRDQSSFVSVASQLILGQSVVAE 334 (368)
Q Consensus 273 ~~~~~al~~~~~~~~~~~~~--------~~~~~l~iRIGihtG~v~~----------~~~~gd~vn~A~rles~~~~~~~ 334 (368)
+++.+|++|++.+..++..+ ....++++|||||||+|+. |++|||+||+|+||++.++++.+
T Consensus 98 ~Av~~Al~~~~~l~~~~~~~~~~~~~~~~~~~~l~~rIGIh~G~v~~G~vG~~~r~~y~v~Gd~VN~AaRLe~~a~~g~I 177 (219)
T 1wc3_A 98 RAIATARQMLVALEKLNQGWQERGLVGRNEVPPVRFRCGIHQGMAVVGLFGSQERSDFTAIGPSVNIAARLQEATAPNSI 177 (219)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSSSSTTCCCCEEEEEEEEEEEEEEEEEETTEEEEEEESHHHHHHHHHHHHSCTTEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccccCCCccEEEEEEEeceEEEEEcCCCCeeEEEEECHHHHHHHHHHhcCCCCeE
Confidence 99999999999998876422 2346899999999999865 89999999999999999999999
Q ss_pred eecceeeeeecccCcccccCCCCccccccccccC
Q psy7403 335 TYDSVTIYFSDIVGFTSLSAESTPELRGEVEMKE 368 (368)
Q Consensus 335 ~~~~~t~~f~~~~~f~~~~~~~~~~~~~~~~~k~ 368 (368)
.+|+.|... +... ..+++|++.||.
T Consensus 178 lvS~~~~~~--------l~~~-~~~~~g~~~lKG 202 (219)
T 1wc3_A 178 MVSAMVAQY--------VPDE-EIIKREFLELKG 202 (219)
T ss_dssp EEEHHHHTT--------SCGG-GEEEEEEECCTT
T ss_pred EECHHHHHh--------hccc-ceeEeeeEEecc
Confidence 999999433 3322 355788888884
No 24
>3mr7_A Adenylate/guanylate cyclase/hydrolase, alpha/beta family; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.60A {Ruegeria pomeroyi}
Probab=99.86 E-value=4.3e-22 Score=174.28 Aligned_cols=152 Identities=16% Similarity=0.047 Sum_probs=125.9
Q ss_pred cccceeEEeccccccchhhhhcccccccccchhHHHHhhhccc-hhhhhhccccceeeeeecEEEEEecCCCCCCChhHH
Q psy7403 194 LKMPRYCLFGDTVNTASRMESNGQALKIHVSPFTKEVLDTFGT-FDLELRGEVEMKVETIGDAYMVVSGLPMRNGNLHAR 272 (368)
Q Consensus 194 ~~~~~~~lfgd~Vnfa~rles~~~~~~I~is~~~~~l~~~~~~-fd~~~~~~~~~K~ktigd~Y~~~~g~p~~~~~~ha~ 272 (368)
..+..+++|.|+++||...+... + +.+..+++.|.. ++.....+..++.|++||+||+++|. +.
T Consensus 4 e~r~vtvlf~Di~gft~l~~~~~-~------~~~~~l~~~~~~~~~~~i~~~~G~v~k~~GD~~~a~f~~--------~~ 68 (189)
T 3mr7_A 4 ERRLCAILAADMAGYSRLMERNE-T------DVLNRQKLYRRELIDPAIAQAGGQIVKTTGDGMLARFDT--------AQ 68 (189)
T ss_dssp EEEEEEEEEEEECCCCGGGCCCC-H------HHHHHHHHHHHHTHHHHHHHTTCEEEEEETTEEEEEESS--------HH
T ss_pred cEEEEEEEEEEchhhHHHHhhCC-H------HHHHHHHHHHHHHHHHHHHHcCCEEEEEeCCEEEEEeCC--------HH
Confidence 34556999999999998665432 2 234556666665 77888889999999999999999984 46
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCCcceEEEeecCCCcce--ecccCChHhHHHHHHcCCCCCceeecceeeeeecccCcc
Q psy7403 273 EIARMSLALLDTVVTFTIRHRPTDQLKLRIGMHTGCRDK--FRDQSSFVSVASQLILGQSVVAETYDSVTIYFSDIVGFT 350 (368)
Q Consensus 273 ~~~~~al~~~~~~~~~~~~~~~~~~l~iRIGihtG~v~~--~~~~gd~vn~A~rles~~~~~~~~~~~~t~~f~~~~~f~ 350 (368)
+++.+|++|++.+..++..+....++++|||||+|+|+. |++|||+||+|+||++.+.++.+.+|+.| |.
T Consensus 69 ~A~~~Al~i~~~l~~~~~~~~~~~~l~~riGi~~G~v~~g~~~~~G~~Vn~AaRl~~~a~~~~I~vs~~~--------~~ 140 (189)
T 3mr7_A 69 AALRCALEIQQAMQQREEDTPRKERIQYRIGINIGDIVLEDGDIFGDAVNVAARLEAISEPGAICVSDIV--------HQ 140 (189)
T ss_dssp HHHHHHHHHHHHHHHHTTTSCGGGCCCEEEEEEEEEEEECSSCEESHHHHHHHHHHHHSCTTCEEEEHHH--------HH
T ss_pred HHHHHHHHHHHHHHHHhhhcccCCceeEEEEEEEEEEEEECCeEEChHHHHHHHHHhhCCCCeEEECHHH--------HH
Confidence 789999999999999886554557899999999999988 99999999999999999999999999999 55
Q ss_pred cccCC--CCccccccccccC
Q psy7403 351 SLSAE--STPELRGEVEMKE 368 (368)
Q Consensus 351 ~~~~~--~~~~~~~~~~~k~ 368 (368)
.+... +..+++|++.+|.
T Consensus 141 ~l~~~~~~~~~~~g~~~lkG 160 (189)
T 3mr7_A 141 ITQDRVSEPFTDLGLQKVKN 160 (189)
T ss_dssp HHTTTCCSCCEEEEEEEETT
T ss_pred hhccccCceEEECCCEEeCC
Confidence 55544 5578899999984
No 25
>1ybt_A Hydrolase, alpha/beta hydrolase fold family; cyclase homology domain, CHD, RV1900C; 2.31A {Mycobacterium tuberculosis} PDB: 1ybu_A*
Probab=99.82 E-value=2.2e-21 Score=169.00 Aligned_cols=143 Identities=17% Similarity=0.192 Sum_probs=118.3
Q ss_pred cceeEEeccccccchhhhhcccccccccchhHHHHhhhccchhhhhhccccceeeeeecEEEEEecCCCCCCChhHHHHH
Q psy7403 196 MPRYCLFGDTVNTASRMESNGQALKIHVSPFTKEVLDTFGTFDLELRGEVEMKVETIGDAYMVVSGLPMRNGNLHAREIA 275 (368)
Q Consensus 196 ~~~~~lfgd~Vnfa~rles~~~~~~I~is~~~~~l~~~~~~fd~~~~~~~~~K~ktigd~Y~~~~g~p~~~~~~ha~~~~ 275 (368)
+..+++|.|+++||...+... |.. ....++..|..++.....+..++.|++||+||+++|.| .+++
T Consensus 16 ~~~tvlf~Di~gft~l~~~~~-~~~-----~~~~l~~~~~~~~~~i~~~gG~v~k~~GD~~ma~f~~p--------~~A~ 81 (184)
T 1ybt_A 16 MLATIMFTDIVGSTQHAAALG-DDR-----WRDLLDNHDTIVCHEIQRFGGREVNTAGDGFVATFTSP--------SAAI 81 (184)
T ss_dssp EEEEEEEEEETTHHHHHHHHH-HHH-----HHHHHHHHHHHHHHHHHHTTCEECCCSSSSEEEEESCH--------HHHH
T ss_pred EEEEEEEEECcCcHHHHHhCC-HHH-----HHHHHHHHHHHHHHHHHHcCCEEEeEeCCEEEEEeCCH--------HHHH
Confidence 335899999999998776543 222 23456667777888889999999999999999999976 3578
Q ss_pred HHHHHHHHHHhhcccCCCCCCcceEEEeecCCCcce------ecccCChHhHHHHHHcCCCCCceeecceeeeeecccCc
Q psy7403 276 RMSLALLDTVVTFTIRHRPTDQLKLRIGMHTGCRDK------FRDQSSFVSVASQLILGQSVVAETYDSVTIYFSDIVGF 349 (368)
Q Consensus 276 ~~al~~~~~~~~~~~~~~~~~~l~iRIGihtG~v~~------~~~~gd~vn~A~rles~~~~~~~~~~~~t~~f~~~~~f 349 (368)
.+|++|++.+..++ +++|||||+|+++. |++|||+||+|+||++.+.++.+.+|+.| |
T Consensus 82 ~~Al~~~~~l~~~~--------l~~riGi~~G~v~~g~ig~~~~~~G~~Vn~AaRl~~~a~~g~IlvS~~~--------~ 145 (184)
T 1ybt_A 82 ACADDIVDAVAALG--------IEVRIGIHAGEVEVRDASHGTDVAGVAVHIGARVCALAGPSEVLVSSTV--------R 145 (184)
T ss_dssp HHHHHHHHHHHTTT--------CCEEEEEEEEEEEEEECSSCEEEESHHHHHHHHHHHHSCTTCEEEEHHH--------H
T ss_pred HHHHHHHHHHHhcC--------CcEEEEEEEeEEEEEecCCCceEECcHHHHHHHHHhcCCCCEEEECHHH--------H
Confidence 89999999888653 89999999999975 99999999999999999999999999999 4
Q ss_pred ccc-cCCCCccccccccccC
Q psy7403 350 TSL-SAESTPELRGEVEMKE 368 (368)
Q Consensus 350 ~~~-~~~~~~~~~~~~~~k~ 368 (368)
..+ ...+..+++|+++||.
T Consensus 146 ~~l~~~~~~~~~~g~~~lkG 165 (184)
T 1ybt_A 146 DIVAGSRHRFAERGEQELKG 165 (184)
T ss_dssp HHTTTSSCCEEEEEEECCTT
T ss_pred HhhcccCceEEEcCCEEecC
Confidence 444 2455688899999984
No 26
>1fx2_A Receptor-type adenylate cyclase gresag 4.1; CAMP, trypanosomes, adenylyl cyclases, monomer-dimer, catalysis, lyase; 1.46A {Trypanosoma brucei} SCOP: d.58.29.1 PDB: 1fx4_A
Probab=99.82 E-value=1.1e-20 Score=170.81 Aligned_cols=149 Identities=17% Similarity=0.213 Sum_probs=117.2
Q ss_pred ceeEEeccccccchhhhhcccccccccchhHHHHhhhccchhhhhhccccceeeeeecEEEEEecCCCCCCChhHHHHHH
Q psy7403 197 PRYCLFGDTVNTASRMESNGQALKIHVSPFTKEVLDTFGTFDLELRGEVEMKVETIGDAYMVVSGLPMRNGNLHAREIAR 276 (368)
Q Consensus 197 ~~~~lfgd~Vnfa~rles~~~~~~I~is~~~~~l~~~~~~fd~~~~~~~~~K~ktigd~Y~~~~g~p~~~~~~ha~~~~~ 276 (368)
..+++|.|+++||...+.. |..+ ...++..+..|+.....+..++.|++||+||+++|.|. +++.
T Consensus 12 ~vtvlF~DI~gfT~l~~~~--~~~~-----~~~l~~~~~~~~~~i~~~~G~v~k~~GD~~ma~fg~p~--------~A~~ 76 (235)
T 1fx2_A 12 PVTLIFTDIESSTALWAAH--PDLM-----PDAVAAHHRMVRSLIGRYKCYEVKTVGDSFMIASKSPF--------AAVQ 76 (235)
T ss_dssp CEEEEEEEETTHHHHHHHC--TTTH-----HHHHHHHHHHHHHHHHHTTCEEEEEETTEEEEEESCHH--------HHHH
T ss_pred cEEEEEEeccChHHHHHHC--HHHH-----HHHHHHHHHHHHHHHHHcCCEEEEEcCCeEEEEeCCHH--------HHHH
Confidence 3589999999999877653 4332 34566677788999999999999999999999999853 4677
Q ss_pred HHHHHHHHHhhcccCC---------------------CC-------------CCcceEEEeecCCCcce--------ecc
Q psy7403 277 MSLALLDTVVTFTIRH---------------------RP-------------TDQLKLRIGMHTGCRDK--------FRD 314 (368)
Q Consensus 277 ~al~~~~~~~~~~~~~---------------------~~-------------~~~l~iRIGihtG~v~~--------~~~ 314 (368)
+|++|+..+...+.+. .+ ..++++|||||||+++. |++
T Consensus 77 ~Al~i~~~l~~~~w~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~riGIh~G~v~~G~~G~~~~~~v 156 (235)
T 1fx2_A 77 LAQELQLCFLHHDWGTNALDDSYREFEEQRAEGECEYTPPTAHMDPEVYSRLWNGLRVRVGIHTGLCDIRHDEVTKGYDY 156 (235)
T ss_dssp HHHHHHHHHHHSCCSCSHHHHHHHHHHHHHHHHCSSCCCSSTTSCHHHHHHHCCSCCEEEEEEEECCEEEECTTSSSEEE
T ss_pred HHHHHHHHHHhCCCchhHhhhhhhhhhhhccccccccCccccccccccccccccCcEEEEEEEeeEEEEEecccccceEE
Confidence 8888888776543211 01 14699999999999965 999
Q ss_pred cCChHhHHHHHHcCCCCCceeecceeeeeecccCccccc----CCCCccccccccccC
Q psy7403 315 QSSFVSVASQLILGQSVVAETYDSVTIYFSDIVGFTSLS----AESTPELRGEVEMKE 368 (368)
Q Consensus 315 ~gd~vn~A~rles~~~~~~~~~~~~t~~f~~~~~f~~~~----~~~~~~~~~~~~~k~ 368 (368)
|||+||+|+||++.+.++.|++|+.|+ ..+. ..+..+++|++.||.
T Consensus 157 ~Gd~VN~AaRle~~a~~g~IlvS~~~~--------~~l~~~~~~~~~~~~~g~~~lkG 206 (235)
T 1fx2_A 157 YGRTPNMAARTESVANGGQVLMTHAAY--------MSLSAEDRKQIDVTALGDVALRG 206 (235)
T ss_dssp ESHHHHHHHHHHHTCCTTCEEEEHHHH--------HTSCHHHHHTCCEEEEEEECCTT
T ss_pred ECHHHHHHHHHHhhcCCCEEEECHHHH--------HHHhhhcccCceeEecccEEecc
Confidence 999999999999999999999999994 4432 234577889998884
No 27
>3hls_A Guanylate cyclase soluble subunit beta-1; coiled-coil domain, signaling helix, S-helix, CGMP biosynthesis, cytoplasm, GTP-binding, heme, iron; 2.15A {Rattus norvegicus}
Probab=97.10 E-value=0.00024 Score=49.94 Aligned_cols=45 Identities=24% Similarity=0.377 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhhhcCCCCCCCCccc
Q psy7403 141 NLLSRMEQYANNLEALVEERTADYLEEKRKCEELLYQLLPNCYQGPCVA 189 (368)
Q Consensus 141 ~~~~~~e~~~~~L~~~~~~~t~~l~~e~~~~~~Ll~~i~pgi~~G~v~~ 189 (368)
.+..+||+++.+|+ ++++++..|+++++.||++|+|..++..+..
T Consensus 21 ~L~~~lE~~~~~Le----e~t~~L~~EK~ktd~LL~~mLP~~VA~~Lk~ 65 (66)
T 3hls_A 21 KLTQELEMLTDRLQ----LTLRALEDEKKKTDTLLYSVLPPSVANELRH 65 (66)
T ss_dssp HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHTSCHHHHHHHHC
T ss_pred HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHcCCHHHHHHHhC
Confidence 45677899998887 6679999999999999999999877655543
No 28
>2qv6_A MJ0145, GTP cyclohydrolase III, MJGC; enzyme, FAPY; HET: GTP; 2.00A {Methanocaldococcus jannaschii}
Probab=84.71 E-value=2.3 Score=38.10 Aligned_cols=59 Identities=12% Similarity=0.099 Sum_probs=53.0
Q ss_pred ccCceEEEeeccCCchh-hccCCChHHHHHHHHHHHHHHhhhhhcccceeEEEEeecceEEE
Q psy7403 16 TYDSVTIYFSDIVGFTS-LSAESTPLQVVELLNDLYTCFDSVIENFDVYKVIFVVLSEIYSI 76 (368)
Q Consensus 16 ~~~~vtilf~di~gft~-ls~~~~~~~~~~~Ln~~f~~~~~~i~~~~~~~~~~~~~Gd~~~~ 76 (368)
...+++|...||.+||. ..+..++-++.....+++..+.+.++++++..+..- ||-||+
T Consensus 128 ~dsqIaVahiDI~d~t~~~t~~~s~yd~~~~~l~l~~~Ll~y~~~igG~lf~iG--gdny~i 187 (268)
T 2qv6_A 128 VDGYVQIAHIDINNITGTLTDIVSAYDTYLNVNKVKLALMEELLKYNALLFFIG--GDNFMA 187 (268)
T ss_dssp SSCCEEEEEEEETTHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTTCCCEEEE--TTEEEE
T ss_pred CcCceEEEEEEecCccccccccCChHHHHHHHHHHHHHHHHHHHHhCCEEEEEC--CCEEEE
Confidence 45789999999999998 555568999999999999999999999999988888 999999
No 29
>3i5c_A Fusion of general control protein GCN4 and WSPR R regulator protein; C-DI-GMP, ggdef, leucine zipper, signaling protein; HET: C2E; 1.94A {Pseudomonas aeruginosa PAO1} PDB: 3i5b_A*
Probab=57.26 E-value=15 Score=30.42 Aligned_cols=58 Identities=10% Similarity=0.080 Sum_probs=46.0
Q ss_pred cCceEEEeeccCCchhhccCCChHHHHHHHHHHHHHHhhhhhcccceeEEEEeecceEEE
Q psy7403 17 YDSVTIYFSDIVGFTSLSAESTPLQVVELLNDLYTCFDSVIENFDVYKVIFVVLSEIYSI 76 (368)
Q Consensus 17 ~~~vtilf~di~gft~ls~~~~~~~~~~~Ln~~f~~~~~~i~~~~~~~~~~~~~Gd~~~~ 76 (368)
....++++.||.+|..+.+..+.+.--.+|..+-..+.+.+...+....+.- ||.+.+
T Consensus 59 ~~~~~l~~idid~f~~in~~~G~~~gd~~L~~ia~~L~~~~~~~~~~~~R~~--~d~F~i 116 (206)
T 3i5c_A 59 QSQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGCSRSSDLAARYG--GEEFAM 116 (206)
T ss_dssp TCCEEEEEEEETTHHHHHHHHCHHHHHHHHHHHHHHHHTTCCSTTCEEEEEE--TTEEEE
T ss_pred CCcEEEEEEECcchhHHHhccChhHHHHHHHHHHHHHHHhcCCCCcEEEEec--CCeEEE
Confidence 3568999999999999999999888888888877777766644444555666 999887
No 30
>3mtk_A Diguanylate cyclase/phosphodiesterase; structural genomics, PSI-2, protein structure initiative; 2.24A {Caldicellulosiruptor saccharolyticus}
Probab=46.83 E-value=30 Score=27.86 Aligned_cols=57 Identities=11% Similarity=0.066 Sum_probs=45.3
Q ss_pred cCceEEEeeccCCchhhccCCChHHHHHHHHHHHHHHhhhhhcccceeEEEEeecceEEE
Q psy7403 17 YDSVTIYFSDIVGFTSLSAESTPLQVVELLNDLYTCFDSVIENFDVYKVIFVVLSEIYSI 76 (368)
Q Consensus 17 ~~~vtilf~di~gft~ls~~~~~~~~~~~Ln~~f~~~~~~i~~~~~~~~~~~~~Gd~~~~ 76 (368)
....++++.||.+|..+.+..+.+.--.+|..+-..+...+.. +....+.- ||.+.+
T Consensus 34 ~~~~~l~~idid~f~~in~~~G~~~gd~lL~~ia~~L~~~~~~-~~~~~R~~--~d~F~i 90 (178)
T 3mtk_A 34 CIDTYLIFLEVRDLEKLNVTYGYDLVDELIIHISKRIKDIAGE-GNKAFKIG--FDRFAI 90 (178)
T ss_dssp CTTEEEEEEEETTHHHHHHHHCHHHHHHHHHHHHHHHHHHHCS-SSEEEEEE--TTEEEE
T ss_pred CCceEEEEEEhhHhhHHHHHhChHHHHHHHHHHHHHHHHhcCC-CCEEEEec--CCEEEE
Confidence 4578999999999999999998888888888877777776655 33455566 999887
No 31
>3qyy_A Response regulator; C-DI-GMP, DGC, ggdef, competitive inhibition, xanthomonas Ca signaling protein-inhibitor complex; HET: C2E; 1.90A {Xanthomonas campestris PV}
Probab=46.01 E-value=22 Score=28.20 Aligned_cols=56 Identities=9% Similarity=0.028 Sum_probs=44.7
Q ss_pred CceEEEeeccCCchhhccCCChHHHHHHHHHHHHHHhhhhhcccceeEEEEeecceEEE
Q psy7403 18 DSVTIYFSDIVGFTSLSAESTPLQVVELLNDLYTCFDSVIENFDVYKVIFVVLSEIYSI 76 (368)
Q Consensus 18 ~~vtilf~di~gft~ls~~~~~~~~~~~Ln~~f~~~~~~i~~~~~~~~~~~~~Gd~~~~ 76 (368)
...++++.||.+|..+.+..+.+.--.+|..+-..+...+... ....+.- ||.+.+
T Consensus 41 ~~~~l~~idid~f~~in~~~G~~~gd~~L~~ia~~L~~~~~~~-~~~~R~~--~deF~i 96 (167)
T 3qyy_A 41 WPFVLFVLDMDNLKPINDRFGHLAGDRVLVRLVESAYGWLGAQ-DWIGRWG--GDEFLI 96 (167)
T ss_dssp CCCEEEEEEESSHHHHHHHHCHHHHHHHHHHHHHHHTTTCCTT-CEEEEEE--TTEEEE
T ss_pred CcEEEEEEechhhhHHHhhcCcHHHHHHHHHHHHHHHHhcCCC-CEEEeec--CceEEE
Confidence 4689999999999999999998888888888777777666543 3455556 999877
No 32
>3icl_A EAL/ggdef domain protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics, consortium, NESG; HET: MSE; 2.00A {Methylococcus capsulatus}
Probab=42.58 E-value=54 Score=25.79 Aligned_cols=57 Identities=16% Similarity=0.153 Sum_probs=44.7
Q ss_pred cCceEEEeeccCCchhhccCCChHHHHHHHHHHHHHHhhhhhcccceeEEEEeecceEEE
Q psy7403 17 YDSVTIYFSDIVGFTSLSAESTPLQVVELLNDLYTCFDSVIENFDVYKVIFVVLSEIYSI 76 (368)
Q Consensus 17 ~~~vtilf~di~gft~ls~~~~~~~~~~~Ln~~f~~~~~~i~~~~~~~~~~~~~Gd~~~~ 76 (368)
....++++.||.+|..+.+..+.+.--.+|..+-..+...+... ....+.- ||.+.+
T Consensus 28 ~~~~~l~~i~id~f~~in~~~G~~~gd~~L~~~a~~L~~~~~~~-~~~~R~~--~d~F~i 84 (171)
T 3icl_A 28 GNPVVLLFLDVDNFKSINDSLGHLVGDRLLRATAERIRTAVRDG-DTVARIG--GDKFTI 84 (171)
T ss_dssp TSCCEEEEEEETTHHHHHHHHCHHHHHHHHHHHHHHHHHHSCTT-CEEEEET--TTEEEE
T ss_pred CCcEEEEEEEChHhhHHHHHhChHHHHHHHHHHHHHHHHhcCCC-CEEEEec--CCEEEE
Confidence 35689999999999999999998888888888777777766553 3445555 888877
No 33
>3ign_A Diguanylate cyclase; ggdef domain, A1U3W3_marav, NESG, MQR89A, structural genomics, PSI-2, protein structure initiative; HET: C2E; 1.83A {Marinobacter aquaeolei VT8}
Probab=42.23 E-value=20 Score=28.68 Aligned_cols=57 Identities=16% Similarity=0.124 Sum_probs=44.5
Q ss_pred cCceEEEeeccCCchhhccCCChHHHHHHHHHHHHHHhhhhhcccceeEEEEeecceEEE
Q psy7403 17 YDSVTIYFSDIVGFTSLSAESTPLQVVELLNDLYTCFDSVIENFDVYKVIFVVLSEIYSI 76 (368)
Q Consensus 17 ~~~vtilf~di~gft~ls~~~~~~~~~~~Ln~~f~~~~~~i~~~~~~~~~~~~~Gd~~~~ 76 (368)
....++++.||.+|..+.+..+.+.--.+|..+-..+.+.+...+ ...+.- ||.+.+
T Consensus 37 ~~~~~l~~i~id~f~~in~~~G~~~gd~~L~~ia~~L~~~~~~~~-~~~R~~--~d~F~i 93 (177)
T 3ign_A 37 GQATSLVMFDIDHFKPVNDTYGHLAGDEVIRHTADVTRNNIRQSD-SAGRYG--GEEFGI 93 (177)
T ss_dssp CCCEEEEEEEETTHHHHHHHHCHHHHHHHHHHHHHHHHTTSCTTS-EEEECS--SSEEEE
T ss_pred CCceEEEEEEchhhHHHHHhhChHHHHHHHHHHHHHHHHhCCCCC-EEEEec--CCeEEE
Confidence 457899999999999999999888888888887777776665443 345555 888877
No 34
>3hva_A Protein FIMX; ggdef diguanylate cyclase, biofilm, C-DI-GMP, transferase; 2.04A {Pseudomonas aeruginosa PAO1}
Probab=40.56 E-value=28 Score=27.73 Aligned_cols=57 Identities=18% Similarity=0.188 Sum_probs=43.6
Q ss_pred cCceEEEeeccCCchhhccCCChHHHHHHHHHHHHHHhhhhhcccceeEEEEeecceEEE
Q psy7403 17 YDSVTIYFSDIVGFTSLSAESTPLQVVELLNDLYTCFDSVIENFDVYKVIFVVLSEIYSI 76 (368)
Q Consensus 17 ~~~vtilf~di~gft~ls~~~~~~~~~~~Ln~~f~~~~~~i~~~~~~~~~~~~~Gd~~~~ 76 (368)
....++++.||.+|..+.+..+.+.--.+|..+-..+...+... ....+.- ||.+.+
T Consensus 42 ~~~~~l~~i~id~f~~in~~~G~~~gd~~L~~~a~~L~~~~~~~-~~~~R~~--~d~F~i 98 (177)
T 3hva_A 42 RKPSTLAYIHLNGYPSLQADHGLSGIDLLLGQLAGLMREQFGEE-ADLARFG--DSIFAA 98 (177)
T ss_dssp CCCEEEEEEEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGG-CEEEECS--SSEEEE
T ss_pred CCCeEEEEEeCCCHHHHHHHhCchhHHHHHHHHHHHHHHhCCCC-ceEEEec--CCeEEE
Confidence 45789999999999999998887777777777777776666553 3445555 888877
No 35
>3tek_A Thermodbp-single stranded DNA binding protein; leucine zipper; 2.00A {Thermoproteus tenax}
Probab=37.36 E-value=18 Score=27.83 Aligned_cols=48 Identities=17% Similarity=0.400 Sum_probs=33.3
Q ss_pred eeccCCchhhccCCChHHHHHHHHHHHHHHhhhhhcccceeEEEEeecceEEEeecccc
Q psy7403 24 FSDIVGFTSLSAESTPLQVVELLNDLYTCFDSVIENFDVYKVIFVVLSEIYSISLAALD 82 (368)
Q Consensus 24 f~di~gft~ls~~~~~~~~~~~Ln~~f~~~~~~i~~~~~~~~~~~~~Gd~~~~~~~g~~ 82 (368)
|..|++....-. +..++..-|.++| |++.+.+|+..+ ||.+|+ ...+.
T Consensus 76 Fn~iRds~~Fr~--ssre~Fd~~K~WF--FnE~~pky~l~k------GDiFmi-iTele 123 (148)
T 3tek_A 76 FNRIRDSEKFRE--TSRELFDGLKKWF--FEEAVPRYNLER------GDIFMI-STELV 123 (148)
T ss_dssp HHHHTTSHHHHH--HHHHHHHHHHHHH--HHTHHHHHTCCT------TCCEEE-EEEEE
T ss_pred HHHhhcHHHHHH--HHHHHHHHHHHHH--HhhhhhhhCCCc------CcEEEE-EEEEE
Confidence 445554433322 3456677777776 889999999988 999998 66553
No 36
>3tvk_A DGC, diguanylate cyclase YDEH; putative zinc sensor, C-DI-GMP, transfe; HET: C2E; 1.80A {Escherichia coli}
Probab=33.83 E-value=36 Score=28.01 Aligned_cols=56 Identities=18% Similarity=0.154 Sum_probs=40.9
Q ss_pred CceEEEeeccCCchhhccCCChHHHHHHHHHHHHHHhhhhhcccceeEEEEeecceEEE
Q psy7403 18 DSVTIYFSDIVGFTSLSAESTPLQVVELLNDLYTCFDSVIENFDVYKVIFVVLSEIYSI 76 (368)
Q Consensus 18 ~~vtilf~di~gft~ls~~~~~~~~~~~Ln~~f~~~~~~i~~~~~~~~~~~~~Gd~~~~ 76 (368)
.++++++.||-+|..+.+..+-..=-.+|..+=..+.+.+...+ ...++- ||-+.+
T Consensus 32 ~~~~l~~iDiD~FK~INd~~Gh~~GD~vL~~va~~L~~~~~~~~-~v~R~g--GDEF~i 87 (179)
T 3tvk_A 32 LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYE-TVYRYG--GEEFII 87 (179)
T ss_dssp SEEEEEEEEETTHHHHHHHHCHHHHHHHHHHHHHHHHHTSCTTS-CEEECS--SSEEEE
T ss_pred CCEEEEEEECCCCcHHHhccCchhHHHHHHHHHHHhHhcCCccc-EEEEcc--CCEEEE
Confidence 46899999999999999888765555666666555666655443 455666 999887
No 37
>3bre_A Probable two-component response regulator; protein-nucleotide complex, signaling protein; HET: C2E; 2.40A {Pseudomonas aeruginosa} PDB: 3i5a_A*
Probab=30.99 E-value=59 Score=29.32 Aligned_cols=57 Identities=11% Similarity=0.091 Sum_probs=41.7
Q ss_pred CceEEEeeccCCchhhccCCChHHHHHHHHHHHHHHhhhhhcccceeEEEEeecceEEE
Q psy7403 18 DSVTIYFSDIVGFTSLSAESTPLQVVELLNDLYTCFDSVIENFDVYKVIFVVLSEIYSI 76 (368)
Q Consensus 18 ~~vtilf~di~gft~ls~~~~~~~~~~~Ln~~f~~~~~~i~~~~~~~~~~~~~Gd~~~~ 76 (368)
...++++.||-+|..+.+..+.+.--.+|..+-..+.+.+...+....+.- ||.+.+
T Consensus 201 ~~~~l~~idid~fk~ind~~G~~~gD~~L~~va~~l~~~~~~~~~~~~R~g--gdeF~i 257 (358)
T 3bre_A 201 SQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGCSRSSDLAARYG--GEEFAM 257 (358)
T ss_dssp CCEEEEEEEETTHHHHHHHHCHHHHHHHHHHHHHHHHTTCCSTTCEEEEEE--TTEEEE
T ss_pred CcEEEEEEEchhhhHHHHhcChHHHHHHHHHHHHHHHHhcCCcCcEEEEec--CCeEEE
Confidence 467999999999999988777766667777766666655444444555666 998877
No 38
>3pjx_A Cyclic dimeric GMP binding protein; ggdef-EAL tandem domain, C-DI-GMP receptor, lyase; 2.00A {Pseudomonas fluorescens} PDB: 3pjw_A 3pju_A* 3pjt_A* 3pfm_A
Probab=26.73 E-value=88 Score=29.26 Aligned_cols=58 Identities=9% Similarity=0.071 Sum_probs=46.4
Q ss_pred cCceEEEeeccCCchhhccCCChHHHHHHHHHHHHHHhhhhhcc---cceeEEEEeecceEEE
Q psy7403 17 YDSVTIYFSDIVGFTSLSAESTPLQVVELLNDLYTCFDSVIENF---DVYKVIFVVLSEIYSI 76 (368)
Q Consensus 17 ~~~vtilf~di~gft~ls~~~~~~~~~~~Ln~~f~~~~~~i~~~---~~~~~~~~~~Gd~~~~ 76 (368)
....++++.||.+|..+.+..+.+.--.+|..+-..+...+..+ +....+.- ||.+.+
T Consensus 46 ~~~~~l~~idid~fk~iNd~~G~~~gD~lL~~va~~L~~~~~~~~~~~~~v~R~g--gdeF~i 106 (430)
T 3pjx_A 46 ASSGYLLLLRVKDLAGLNQRLGGQRTDELLKAVGEQLSRECAKYPETQNLVTRIR--GGEFAV 106 (430)
T ss_dssp CSCEEEEEEEETTHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTSGGGTTCEEEEE--TTEEEE
T ss_pred cCceEEEEEEchhhhHHHHhcChHHHHHHHHHHHHHHHHHHHhcCCcCceEEEec--CceEEE
Confidence 45678999999999999999988888888888777777777664 44556666 999887
No 39
>3hvw_A Diguanylate-cyclase (DGC); alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.70A {Pseudomonas aeruginosa}
Probab=26.25 E-value=70 Score=25.54 Aligned_cols=56 Identities=5% Similarity=0.029 Sum_probs=45.2
Q ss_pred cCceEEEeecc---CCchhhccCCChHHHHHHHHHHHHHHhhhhhcccceeEEEEeecceEEE
Q psy7403 17 YDSVTIYFSDI---VGFTSLSAESTPLQVVELLNDLYTCFDSVIENFDVYKVIFVVLSEIYSI 76 (368)
Q Consensus 17 ~~~vtilf~di---~gft~ls~~~~~~~~~~~Ln~~f~~~~~~i~~~~~~~~~~~~~Gd~~~~ 76 (368)
....++++.|| .+|..+.+..+.+.--.+|..+-..+...+.. ....+.- ||.+.+
T Consensus 25 ~~~~~l~~i~i~~id~f~~in~~~G~~~gD~~L~~ia~~L~~~~~~--~~v~R~~--~deF~i 83 (176)
T 3hvw_A 25 DGALTVIAADLLPLALLNTIIRTLGYPFSNDLMLEARDRIRAELPD--FTLYKIS--PTRFGL 83 (176)
T ss_dssp HSEEEEEEEECSCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCTT--SCEEEEE--TTEEEE
T ss_pred CCCceEEEEEecCHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHCCC--CeEEEec--CCEEEE
Confidence 35678899999 99999999998888888888887778777776 4555666 999887
Done!