RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy7403
(368 letters)
>d1fx2a_ d.58.29.1 (A:) Receptor-type monomeric adenylyl cyclase
{Trypanosome (Trypanosoma brucei), different isoform
[TaxId: 5691]}
Length = 235
Score = 88.1 bits (217), Expect = 7e-21
Identities = 41/241 (17%), Positives = 78/241 (32%), Gaps = 40/241 (16%)
Query: 10 QSVVAETYDSVTIYFSDIVGFTSLSAESTPLQVVELLNDLYTCFDSVIENFDVYKVIFVV 69
E D VT+ F+DI T+L + P + + + + S+I + Y+V V
Sbjct: 3 NRAPKEPTDPVTLIFTDIESSTALW-AAHPDLMPDAVAAHHRMVRSLIGRYKCYEVKTVG 61
Query: 70 LSEIYSISLAALDYESNNILDNLLSRMEQYANNLEALVEERTADYLEEKRKCEELLYQLL 129
D+ + + ++ +EL L
Sbjct: 62 --------------------DSFMIASKSPFAAVQL---------------AQELQLCFL 86
Query: 130 PKDYESNNILDNLLSRMEQYANNLEALVEERTADYLEEKRKCEELLYQLLPNCYQGPCVA 189
D+ +N + D+ E+ E TA E ++ + G C
Sbjct: 87 HHDWGTNAL-DDSYREFEEQRAEGECEYTPPTAHMDPEVYSRLWNGLRVRVGIHTGLCDI 145
Query: 190 GVVGLKMPRYCLFGDTVNTASRMESNGQALKIHVSPFTKEVL--DTFGTFDLELRGEVEM 247
+ Y +G T N A+R ES ++ ++ L + D+ G+V +
Sbjct: 146 RHDEVTKG-YDYYGRTPNMAARTESVANGGQVLMTHAAYMSLSAEDRKQIDVTALGDVAL 204
Query: 248 K 248
+
Sbjct: 205 R 205
Score = 42.2 bits (98), Expect = 4e-05
Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 329 QSVVAETYDSVTIYFSDIVGFTSLSAESTPE 359
E D VT+ F+DI T+L + P+
Sbjct: 3 NRAPKEPTDPVTLIFTDIESSTALW-AAHPD 32
Score = 41.1 bits (95), Expect = 9e-05
Identities = 21/146 (14%), Positives = 48/146 (32%), Gaps = 37/146 (25%)
Query: 201 LFGDTVNTASRMESNGQALKIHVSPFTKEVLDT-FGTFDLELRGEVEMKVETIGDAYMVV 259
+F D ++ + ++ + + + + +V+T+GD++M+
Sbjct: 16 IFTDIESSTALWAAHPDLMP--------DAVAAHHRMVRSLIGRYKCYEVKTVGDSFMIA 67
Query: 260 SGLPMRNGNLHAREIARMSL---------------------------ALLDTVVTFTIRH 292
S P A+E+ L + +
Sbjct: 68 SKSPFAAVQ-LAQELQLCFLHHDWGTNALDDSYREFEEQRAEGECEYTPPTAHMDPEVYS 126
Query: 293 RPTDQLKLRIGMHTGCRDKFRDQSSF 318
R + L++R+G+HTG D D+ +
Sbjct: 127 RLWNGLRVRVGIHTGLCDIRHDEVTK 152
>d1azsa_ d.58.29.1 (A:) Adenylyl cyclase VC1, domain C1a {Dog (Canis
familiaris) [TaxId: 9615]}
Length = 190
Score = 72.3 bits (176), Expect = 1e-15
Identities = 31/168 (18%), Positives = 65/168 (38%), Gaps = 1/168 (0%)
Query: 7 ILGQSVVAETYDSVTIYFSDIVGFTSLSAESTPLQVVELLNDLYTCFDSVIENFDVYKV- 65
++ + + +D+V+I F+DI GFTSL+++ T ++V LN+L+ FD + ++
Sbjct: 2 MMFHKIYIQKHDNVSILFADIEGFTSLASQCTAQELVMTLNELFARFDKLAAENHCLRIK 61
Query: 66 IFVVLSEIYSISLAALDYESNNILDNLLSRMEQYANNLEALVEERTADYLEEKRKCEELL 125
I S A ++ ++ + +E + E + +
Sbjct: 62 ILGDCYYCVSGLPEARADHAHCCVEMGMDMIEAISLVREMTGVNVNMRVGIHSGRVHCGV 121
Query: 126 YQLLPKDYESNNILDNLLSRMEQYANNLEALVEERTADYLEEKRKCEE 173
L ++ + L + ME + + T YL + E
Sbjct: 122 LGLRKWQFDVWSNDVTLANHMEAGGKAGRIHITKATLSYLNGDYEVEP 169
Score = 56.1 bits (134), Expect = 6e-10
Identities = 18/86 (20%), Positives = 39/86 (45%)
Query: 163 DYLEEKRKCEELLYQLLPNCYQGPCVAGVVGLKMPRYCLFGDTVNTASRMESNGQALKIH 222
+ + R+ + + + G GV+GL+ ++ ++ + V A+ ME+ G+A +IH
Sbjct: 93 EAISLVREMTGVNVNMRVGIHSGRVHCGVLGLRKWQFDVWSNDVTLANHMEAGGKAGRIH 152
Query: 223 VSPFTKEVLDTFGTFDLELRGEVEMK 248
++ T L+ + GE
Sbjct: 153 ITKATLSYLNGDYEVEPGCGGERNAY 178
Score = 46.8 bits (110), Expect = 7e-07
Identities = 12/34 (35%), Positives = 24/34 (70%)
Query: 326 ILGQSVVAETYDSVTIYFSDIVGFTSLSAESTPE 359
++ + + +D+V+I F+DI GFTSL+++ T +
Sbjct: 2 MMFHKIYIQKHDNVSILFADIEGFTSLASQCTAQ 35
>d1azsb_ d.58.29.1 (B:) Adenylyl cyclase IIC1, domain C2a {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 199
Score = 66.1 bits (160), Expect = 2e-13
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 182 CYQGPCVAGVVGLKMPRYCLFGDTVNTASRMESNGQALKIHVSPFTKEVLDTFGTFDLEL 241
GP +AGV+G + P+Y ++G+TVN ASRM+S G KI V+ T +L T G +
Sbjct: 122 INHGPVIAGVIGAQKPQYDIWGNTVNVASRMDSTGVLDKIQVTEETSLILQTLG-YTCTC 180
Query: 242 RGEVEMK 248
RG + +K
Sbjct: 181 RGIINVK 187
Score = 63.8 bits (154), Expect = 2e-12
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 7/61 (11%)
Query: 15 ETYDSVTIYFSDIVGFTSLSAES----TPLQVVELLNDLYTCFDSVIE---NFDVYKVIF 67
++YD V + F+ I F ES L+ + LLN++ FD ++ V K+
Sbjct: 2 QSYDCVCVMFASIPDFKEFYTESDVNKEGLECLRLLNEIIADFDDLLSKPKFSGVEKIKT 61
Query: 68 V 68
+
Sbjct: 62 I 62
Score = 46.8 bits (110), Expect = 7e-07
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 334 ETYDSVTIYFSDIVGFTSLSAESTPELRGE 363
++YD V + F+ I F ES G
Sbjct: 2 QSYDCVCVMFASIPDFKEFYTESDVNKEGL 31
Score = 41.8 bits (97), Expect = 4e-05
Identities = 36/181 (19%), Positives = 59/181 (32%), Gaps = 17/181 (9%)
Query: 201 LFGDTVN-TASRMESNGQALKIHVSPFTKEVLDTFGTFDLELRGEVEMKVETIGDAYMVV 259
+F + ES+ + E++ F + + K++TIG YM
Sbjct: 10 MFASIPDFKEFYTESDVNKEGLECLRLLNEIIADFDDLLSKPKFSGVEKIKTIGSTYMAA 69
Query: 260 SGLPMRNGNLHAREIARMSL--------ALLDTVVTFTIRHRPTDQLKLRIGMHTGCRDK 311
+GL HA+E R + A I + KLR+G++ G
Sbjct: 70 TGLSAIPSQEHAQEPERQYMHIGTMVEFAYALVGKLDAINKHSFNDFKLRVGINHG---P 126
Query: 312 FRDQSSFVSVASQLILGQSV-VAETYDSVT----IYFSDIVGFTSLSAESTPELRGEVEM 366
I G +V VA DS I ++ + T RG + +
Sbjct: 127 VIAGVIGAQKPQYDIWGNTVNVASRMDSTGVLDKIQVTEETSLILQTLGYTCTCRGIINV 186
Query: 367 K 367
K
Sbjct: 187 K 187
>d1wc1a_ d.58.29.1 (A:) Adenylate cyclase CyaC {Spirulina platensis
[TaxId: 118562]}
Length = 197
Score = 59.2 bits (142), Expect = 5e-11
Identities = 29/166 (17%), Positives = 50/166 (30%), Gaps = 18/166 (10%)
Query: 20 VTIYFSDIVGFTSLSAESTPLQVVELLNDLYTCFDSVIENFDVYKVIFVV---------- 69
+TI FSDIVGFT +S V ELLN+ + FV
Sbjct: 8 ITILFSDIVGFTRMSNALQSQGVAELLNEYLGEMTRAVFENQGTVDKFVGDAIMALYGAP 67
Query: 70 ------LSEIYSISLAALDYESNNILDNLLSRMEQYANNLEALVEERTADYLEEKRKCEE 123
+I+ A + L+ N V R +
Sbjct: 68 EEMSPSEQVRRAIATARQMLVALEKLNQGWQERGLVGRNEVPPVRFRCGIHQGMAVVGLF 127
Query: 124 LLYQLLPKDYESNNILDNLLSRMEQYANNLEALVEERTADYLEEKR 169
+ ++ N+ +R+++ +V A Y+ ++
Sbjct: 128 GSQERSDFTAIGPSV--NIAARLQEATAPNSIMVSAMVAQYVPDEE 171
Score = 44.6 bits (104), Expect = 5e-06
Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Query: 182 CYQGPCVAGVVGL-KMPRYCLFGDTVNTASRMESNGQALKIHVSPFTKEVLDTFGTFDLE 240
+QG V G+ G + + G +VN A+R++ I VS + + ++
Sbjct: 117 IHQGMAVVGLFGSQERSDFTAIGPSVNIAARLQEATAPNSIMVSAMVAQYV---PDEEII 173
Query: 241 LRGEVEMK 248
R +E+K
Sbjct: 174 KREFLELK 181
Score = 40.0 bits (92), Expect = 2e-04
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 339 VTIYFSDIVGFTSLSAESTPE 359
+TI FSDIVGFT +S +
Sbjct: 8 ITILFSDIVGFTRMSNALQSQ 28
>d1nt2b_ a.183.1.1 (B:) Nop5p {Archaeon Archaeoglobus fulgidus
[TaxId: 2234]}
Length = 256
Score = 29.8 bits (67), Expect = 0.46
Identities = 15/77 (19%), Positives = 30/77 (38%), Gaps = 9/77 (11%)
Query: 41 QVVELLNDLYTCFDSVIENF-----DVYKVIFVVLSEIYSISLAALDYESNNILDNLLSR 95
+V+ L ++ D I D+ V ++E + + L ++ +
Sbjct: 79 ALVKALEEI----DESINMLNEKLEDIRAVKESEITEKFEKKIRELRELRRDVEREIEEV 134
Query: 96 MEQYANNLEALVEERTA 112
ME+ A N+ LV + A
Sbjct: 135 MEKIAPNMTELVGAKVA 151
>d1b5la_ a.26.1.3 (A:) Interferon-tau {Sheep (Ovis aries) [TaxId:
9940]}
Length = 164
Score = 27.1 bits (60), Expect = 2.8
Identities = 10/54 (18%), Positives = 27/54 (50%), Gaps = 8/54 (14%)
Query: 61 DVYKVIFVVLSEIYSI-----SLAALDYESNNILDNLLSRMEQYANNLEALVEE 109
+ V++ +L + +++ S AA D +L+ L + ++Q ++L+ +
Sbjct: 52 QAFPVLYEMLQQSFNLFYTEHSSAAWD---TTLLEQLCTGLQQQLDHLDTCRGQ 102
>gi|114623914|ref|XP_001152006.1|(29-183:189) PREDICTED: similar to
Interferon alpha-16 precursor (Interferon alpha-WA) [Pan
troglodytes] E=4e-75 s/c=1.83 id=88% cov=101%
Length = 155
Score = 26.3 bits (58), Expect = 4.2
Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 8/54 (14%)
Query: 61 DVYKVIFVVLSEIYSI-----SLAALDYESNNILDNLLSRMEQYANNLEALVEE 109
V ++ + +++ S AA D +LD + Q N+LEA V +
Sbjct: 47 QAISVFHEMIQQTFNLFSTKDSSAAWD---ETLLDKFYIELFQQLNDLEACVIQ 97
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.134 0.371
Gapped
Lambda K H
0.267 0.0645 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,304,906
Number of extensions: 60044
Number of successful extensions: 175
Number of sequences better than 10.0: 1
Number of HSP's gapped: 173
Number of HSP's successfully gapped: 26
Length of query: 368
Length of database: 2,407,596
Length adjustment: 87
Effective length of query: 281
Effective length of database: 1,213,086
Effective search space: 340877166
Effective search space used: 340877166
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (24.4 bits)