RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy7404
         (196 letters)



>d1de4c2 c.8.4.1 (C:190-382) Transferrin receptor ectodomain, apical
           domain {Human (Homo sapiens) [TaxId: 9606]}
          Length = 193

 Score = 29.9 bits (67), Expect = 0.13
 Identities = 15/102 (14%), Positives = 27/102 (26%), Gaps = 8/102 (7%)

Query: 80  LILKSKGWRYARGGWEEVFEPVSKTCTSPEG-ASTSSWPGHDETQVIKLPVIDSISPRPA 138
           +++     ++     E  F           G   T  +P  + TQ    P   S  P   
Sbjct: 90  VLIYMDQTKFPIVNAELSFFG---HAHLGTGDPYTPGFPSFNHTQ--FPPSRSSGLPNIP 144

Query: 139 YLPLSIPKDLEPRLSRLHGDPIVWWIGQI-LKYLFKPQPKTR 179
              +S     E     + GD    W      + +       +
Sbjct: 145 VQTIS-RAAAEKLFGNMEGDCPSDWKTDSTCRMVTSESKNVK 185


>d1urha2 c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtransferase
           {Escherichia coli [TaxId: 562]}
          Length = 120

 Score = 28.4 bits (62), Expect = 0.27
 Identities = 8/36 (22%), Positives = 11/36 (30%), Gaps = 3/36 (8%)

Query: 64  HHVVYCFIVAYATQRTLILKSKGWRYAR---GGWEE 96
             +V C     A    L L +      +   G W E
Sbjct: 84  PIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSE 119


>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus
           subtilis [TaxId: 1423]}
          Length = 411

 Score = 26.9 bits (58), Expect = 1.6
 Identities = 4/31 (12%), Positives = 10/31 (32%)

Query: 159 PIVWWIGQILKYLFKPQPKTRDFLSKYGEKI 189
           P    +   L  L +     ++   +Y   +
Sbjct: 1   PHDKSLDNSLTLLKEGYLFIKNRTERYNSDL 31


>d1k28a1 b.40.8.1 (A:6-129) Tail-associated lysozyme gp5, N-terminal
           domain {Bacteriophage T4 [TaxId: 10665]}
          Length = 124

 Score = 23.8 bits (51), Expect = 9.2
 Identities = 2/10 (20%), Positives = 7/10 (70%)

Query: 158 DPIVWWIGQI 167
           + + W++G +
Sbjct: 1   NNLNWFVGVV 10


>d1nh5a_ g.3.7.1 (A:) Scorpion toxin {Bark scorpion (Centruroides
          sculpturatus), cse-v5 [TaxId: 218467]}
          Length = 60

 Score = 22.8 bits (49), Expect = 9.8
 Identities = 9/40 (22%), Positives = 16/40 (40%), Gaps = 6/40 (15%)

Query: 36 YLQNPSDCRTAKKLVCTLNKGCGYGCQLHHVV--YCFIVA 73
          Y  +   C    KL C  N  C   C++      +C+ ++
Sbjct: 4  YPVDSKGC----KLSCVANNYCDNQCKMKKASGGHCYAMS 39


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.320    0.137    0.439 

Gapped
Lambda     K      H
   0.267   0.0554    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 769,351
Number of extensions: 34409
Number of successful extensions: 76
Number of sequences better than 10.0: 1
Number of HSP's gapped: 76
Number of HSP's successfully gapped: 8
Length of query: 196
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 115
Effective length of database: 1,295,466
Effective search space: 148978590
Effective search space used: 148978590
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.4 bits)