Query psy7405
Match_columns 87
No_of_seqs 17 out of 19
Neff 2.0
Searched_HMMs 13730
Date Fri Aug 16 17:25:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7405.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/7405hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1gqva_ d.5.1.1 (A:) Eosinophi 13.3 22 0.0016 22.7 0.3 15 44-58 119-133 (135)
2 d2oola2 d.110.3.9 (A:26-139) S 13.1 35 0.0026 19.0 1.2 16 35-50 5-20 (114)
3 d1dyta_ d.5.1.1 (A:) Eosinophi 9.9 33 0.0024 21.7 0.3 14 44-57 117-130 (133)
4 d1frba_ c.1.7.1 (A:) FR-1 (fib 9.8 51 0.0037 20.9 1.2 14 19-32 301-314 (315)
5 d2qqma3 b.23.1.1 (A:156-263) M 7.5 51 0.0037 17.4 0.4 6 44-49 3-8 (108)
6 d1nara_ c.1.8.5 (A:) Seed stor 6.6 1.4E+02 0.01 19.4 2.4 33 52-84 2-34 (289)
7 d1ut7a_ b.143.1.1 (A:) No apic 6.1 64 0.0046 20.0 0.3 25 45-69 17-42 (166)
8 d1poib_ c.124.1.3 (B:) Glutaco 5.8 96 0.007 20.6 1.1 25 40-64 159-183 (260)
9 d1nzia1 b.23.1.1 (A:1-117) Com 5.8 71 0.0052 17.2 0.4 8 42-49 6-13 (117)
10 d1j9ia_ a.6.1.5 (A:) Terminase 5.8 34 0.0025 19.9 -1.1 10 57-66 10-19 (68)
No 1
>d1gqva_ d.5.1.1 (A:) Eosinophil-derived neurotoxin (EDN) {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.34 E-value=22 Score=22.72 Aligned_cols=15 Identities=20% Similarity=0.494 Sum_probs=13.1
Q ss_pred cccCCcccccccccc
Q psy7405 44 INIPGYRYLPISRET 58 (87)
Q Consensus 44 I~sPGY~Y~PVsRet 58 (87)
-++|+|.++|||=|.
T Consensus 119 ~d~~~~p~vPVHlD~ 133 (135)
T d1gqva_ 119 RDPPQYPVVPVHLDR 133 (135)
T ss_dssp TSCTTCSEEEEEEEE
T ss_pred CCCCCCCccceeccc
Confidence 679999999999774
No 2
>d2oola2 d.110.3.9 (A:26-139) Sensor protein PhyB2 {Rhodopseudomonas palustris [TaxId: 1076]}
Probab=13.09 E-value=35 Score=19.00 Aligned_cols=16 Identities=25% Similarity=0.468 Sum_probs=13.4
Q ss_pred cCCCCCCcccccCCcc
Q psy7405 35 DDPVNPHERINIPGYR 50 (87)
Q Consensus 35 ddp~~a~~RI~sPGY~ 50 (87)
.+|+|.-+.||.-|+=
T Consensus 5 ~EPIh~pg~IQphG~L 20 (114)
T d2oola2 5 REPIHIPGAIQPHGYL 20 (114)
T ss_dssp GSCTTCCSEECTTSEE
T ss_pred cccCcCCCccCCCcEE
Confidence 4799999999998873
No 3
>d1dyta_ d.5.1.1 (A:) Eosinophil cationic protein (ECP), ribonuclease 3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.95 E-value=33 Score=21.72 Aligned_cols=14 Identities=21% Similarity=0.553 Sum_probs=12.0
Q ss_pred cccCCccccccccc
Q psy7405 44 INIPGYRYLPISRE 57 (87)
Q Consensus 44 I~sPGY~Y~PVsRe 57 (87)
-++|+|.++|||=|
T Consensus 117 ~d~~~yp~vPVHlD 130 (133)
T d1dyta_ 117 RDSPRYPVVPVHLD 130 (133)
T ss_dssp TSCTTCSEEEEEEE
T ss_pred CcCCCCCccceecc
Confidence 46899999999966
No 4
>d1frba_ c.1.7.1 (A:) FR-1 (fibroblast growth factor-induced) protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=9.78 E-value=51 Score=20.94 Aligned_cols=14 Identities=21% Similarity=0.263 Sum_probs=11.2
Q ss_pred CcccCCCCCCCccc
Q psy7405 19 PFISEYPTYPSFKS 32 (87)
Q Consensus 19 p~~~d~Ptwp~~ks 32 (87)
|+....|.||++++
T Consensus 301 ~~~~~~~~~~~~~~ 314 (315)
T d1frba_ 301 PETVNMEEYPYDAE 314 (315)
T ss_dssp GGGTTSTTCCTTCC
T ss_pred hhhcCCCCCCCCCC
Confidence 45677899999886
No 5
>d2qqma3 b.23.1.1 (A:156-263) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.54 E-value=51 Score=17.38 Aligned_cols=6 Identities=50% Similarity=1.237 Sum_probs=3.9
Q ss_pred cccCCc
Q psy7405 44 INIPGY 49 (87)
Q Consensus 44 I~sPGY 49 (87)
|+||||
T Consensus 3 i~SP~y 8 (108)
T d2qqma3 3 IKSPGF 8 (108)
T ss_dssp EECTTT
T ss_pred EeCCCC
Confidence 566666
No 6
>d1nara_ c.1.8.5 (A:) Seed storage protein {Vicia narbonensis, Narbonin [TaxId: 3912]}
Probab=6.64 E-value=1.4e+02 Score=19.42 Aligned_cols=33 Identities=27% Similarity=0.427 Sum_probs=23.7
Q ss_pred ccccccccccCcccCCCCCCCCCCCCCCccccc
Q psy7405 52 LPISRETYGISPRNIQPHHYPHYDRPFPRVGIH 84 (87)
Q Consensus 52 ~PVsRetYGySPR~Iy~h~Y~~~~r~~pr~g~~ 84 (87)
.||-|+=+|-.++++-..++|...-..+-+.+|
T Consensus 2 ~~~~r~Y~g~~~~~~~~~d~p~~~~~~~~~~~h 34 (289)
T d1nara_ 2 KPIFREYIGVKPNSTTLHDFPTEIINTETLEFH 34 (289)
T ss_dssp CCEEEEEESCCTTCCSCSSCCSTTCCCSSSEEE
T ss_pred CcchhhhcCCCCCCCccccCChhhcCCCceEEE
Confidence 478888889888888888887665445555444
No 7
>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=6.11 E-value=64 Score=19.96 Aligned_cols=25 Identities=24% Similarity=0.335 Sum_probs=17.2
Q ss_pred ccCCcccccccccccc-cCcccCCCC
Q psy7405 45 NIPGYRYLPISRETYG-ISPRNIQPH 69 (87)
Q Consensus 45 ~sPGY~Y~PVsRetYG-ySPR~Iy~h 69 (87)
.-||||+.|-..|.-. |--++|...
T Consensus 17 LPpG~RF~PTDeELv~~YL~~Ki~g~ 42 (166)
T d1ut7a_ 17 LPPGFRFYPTDEELMVQYLCRKAAGY 42 (166)
T ss_dssp CCTTEEECCCHHHHHHHTHHHHHTTC
T ss_pred CCCccccCCCcHHHHHHHHHHHHcCC
Confidence 5689999998877654 455555443
No 8
>d1poib_ c.124.1.3 (B:) Glutaconate:CoA transferase beta {Acidaminococcus fermentans [TaxId: 905]}
Probab=5.79 E-value=96 Score=20.64 Aligned_cols=25 Identities=24% Similarity=0.376 Sum_probs=20.8
Q ss_pred CCcccccCCcccccccccccccCcc
Q psy7405 40 PHERINIPGYRYLPISRETYGISPR 64 (87)
Q Consensus 40 a~~RI~sPGY~Y~PVsRetYGySPR 64 (87)
-+|=|.++||...+..|+.+|.+-+
T Consensus 159 ~vd~vt~~G~~~~~~~r~~~gl~~~ 183 (260)
T d1poib_ 159 KIDYVTSPGWIDGPGGRERLGLPGD 183 (260)
T ss_dssp SCSCCSBCCSTTSTTHHHHTTCCTT
T ss_pred ccceeccCCCccccccccccCccCC
Confidence 3666899999999999999987644
No 9
>d1nzia1 b.23.1.1 (A:1-117) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}
Probab=5.77 E-value=71 Score=17.19 Aligned_cols=8 Identities=38% Similarity=0.609 Sum_probs=5.2
Q ss_pred cccccCCc
Q psy7405 42 ERINIPGY 49 (87)
Q Consensus 42 ~RI~sPGY 49 (87)
.-|+||||
T Consensus 6 G~i~SP~y 13 (117)
T d1nzia1 6 GEILSPNY 13 (117)
T ss_dssp EEEECTTT
T ss_pred EEEeCCCC
Confidence 45677776
No 10
>d1j9ia_ a.6.1.5 (A:) Terminase gpNU1 subunit domain {Bacteriophage lambda [TaxId: 10710]}
Probab=5.76 E-value=34 Score=19.91 Aligned_cols=10 Identities=40% Similarity=0.727 Sum_probs=0.0
Q ss_pred cccccCcccC
Q psy7405 57 ETYGISPRNI 66 (87)
Q Consensus 57 etYGySPR~I 66 (87)
+.+|+|+|.|
T Consensus 10 ~iFGVS~~TI 19 (68)
T d1j9ia_ 10 DIFGASIRTI 19 (68)
T ss_dssp HHTTCCHHHH
T ss_pred HHhCCCHHHH
Done!