RPS-BLAST 2.2.26 [Sep-21-2011]

Database: pdb70 
           27,921 sequences; 6,701,793 total letters

Searching..................................................done

Query= psy7408
         (66 letters)



>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A
           {Streptococcus mutans} PDB: 3aic_A* 3aib_A*
          Length = 844

 Score = 27.1 bits (59), Expect = 0.37
 Identities = 10/46 (21%), Positives = 21/46 (45%)

Query: 18  RKAKFWQSYVRALKGSTAILLDKNQPIKPVAEHPSKHMQDWHKAWF 63
           ++AK+  +++  L+     L  + Q    V   PS  ++ W   +F
Sbjct: 760 QQAKYGGAFLEELQAKYPELFARKQISTGVPMDPSVKIKQWSAKYF 805


  Database: pdb70
    Posted date:  Sep 4, 2012  3:40 AM
  Number of letters in database: 6,701,793
  Number of sequences in database:  27,921
  
Lambda     K      H
   0.321    0.133    0.431 

Gapped
Lambda     K      H
   0.267   0.0501    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,039,262
Number of extensions: 44074
Number of successful extensions: 77
Number of sequences better than 10.0: 1
Number of HSP's gapped: 77
Number of HSP's successfully gapped: 2
Length of query: 66
Length of database: 6,701,793
Length adjustment: 37
Effective length of query: 29
Effective length of database: 5,668,716
Effective search space: 164392764
Effective search space used: 164392764
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.0 bits)