Query psy7414
Match_columns 320
No_of_seqs 183 out of 1239
Neff 4.8
Searched_HMMs 13730
Date Fri Aug 16 17:42:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7414.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/7414hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1jjca_ d.104.1.1 (A:) Phenyl- 100.0 1.2E-70 9.1E-75 513.4 15.1 186 58-319 4-208 (266)
2 d1eova2 d.104.1.1 (A:205-557) 97.7 0.00018 1.3E-08 66.1 12.5 91 76-187 50-143 (353)
3 d1c0aa3 d.104.1.1 (A:107-287,A 97.6 0.00016 1.2E-08 66.8 11.1 39 149-187 94-132 (346)
4 d1nnha_ d.104.1.1 (A:) Hypothe 97.5 0.00043 3.2E-08 62.7 13.0 95 75-187 19-122 (293)
5 d1b8aa2 d.104.1.1 (A:104-438) 97.3 0.00038 2.8E-08 63.3 9.0 93 76-187 40-133 (335)
6 d1l0wa3 d.104.1.1 (A:105-294,A 97.1 0.0015 1.1E-07 60.4 11.7 40 148-187 101-140 (356)
7 d1e1oa2 d.104.1.1 (A:161-502) 97.1 0.0022 1.6E-07 58.4 11.9 45 143-187 77-123 (342)
8 d1n9wa2 d.104.1.1 (A:111-414) 96.5 0.00088 6.4E-08 60.1 4.5 92 75-187 20-113 (304)
9 d1jjcb5 d.104.1.1 (B:475-681) 95.4 0.028 2E-06 47.5 8.8 56 259-319 132-187 (207)
10 d1z7ma1 d.104.1.1 (A:6-323) AT 93.6 0.058 4.3E-06 47.4 6.8 103 73-187 18-128 (318)
11 d1wu7a2 d.104.1.1 (A:3-329) Hi 92.3 0.2 1.5E-05 44.1 8.4 101 74-190 22-131 (327)
12 d1nj8a3 d.104.1.1 (A:0-267) Pr 89.9 4.2 0.00031 34.7 14.6 108 69-187 29-157 (268)
13 d1seta2 d.104.1.1 (A:111-421) 89.6 3.3 0.00024 36.8 14.1 166 71-311 53-240 (311)
14 d1h4vb2 d.104.1.1 (B:2-325) Hi 88.3 1 7.6E-05 39.2 9.5 101 75-187 21-132 (324)
15 d1g5ha2 d.104.1.1 (A:41-330) T 86.1 1.3 9.3E-05 39.1 8.7 49 261-310 188-237 (290)
16 d1qe0a2 d.104.1.1 (A:1-325) Hi 84.5 0.61 4.4E-05 40.7 5.6 53 135-187 73-133 (325)
17 d1b76a2 d.104.1.1 (A:1-394) Gl 79.7 17 0.0013 31.7 13.9 30 157-187 148-181 (331)
18 d1atia2 d.104.1.1 (A:1-394) Gl 78.4 7.5 0.00055 35.9 11.1 33 278-310 272-308 (394)
19 d1nj1a3 d.104.1.1 (A:19-283) P 68.9 25 0.0018 29.1 11.5 108 69-187 27-154 (265)
20 d1usya_ d.104.1.1 (A:) ATP pho 66.7 0.97 7.1E-05 39.0 1.6 60 127-190 35-101 (275)
21 d1kmma2 d.104.1.1 (A:4-325) Hi 63.7 3.4 0.00024 35.6 4.7 98 75-187 21-130 (322)
22 d1nyra4 d.104.1.1 (A:242-532) 31.1 66 0.0048 27.4 7.8 104 71-187 26-149 (291)
23 d1n0ua4 d.58.11.1 (A:482-560) 21.4 14 0.001 25.9 1.1 27 291-318 34-60 (79)
24 d1ysja2 d.58.19.1 (A:178-292) 20.3 40 0.0029 24.2 3.6 35 251-286 80-114 (115)
No 1
>d1jjca_ d.104.1.1 (A:) Phenyl-tRNA synthetase (PheRS) alpha subunit, PheS {Thermus thermophilus [TaxId: 274]}
Probab=100.00 E-value=1.2e-70 Score=513.36 Aligned_cols=186 Identities=30% Similarity=0.562 Sum_probs=172.3
Q ss_pred hccCCCCCCCCCCChHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCeecceeccccCCCCCCCCCCCCCcccccccc-
Q psy7414 58 LSYLNKNLHNKKYHPLCMLKQRIINFFYSEFVGKKGTPIFSIYDSISPVVTVEENFDSLLVAKDHVSRSKNDCYYVNRE- 136 (320)
Q Consensus 58 ls~~gr~l~~~~~HPl~il~~~I~~~F~~~~~~~~g~p~F~~~~~~~pVVs~~~NFD~L~~P~DHPsR~~~DTyYin~~- 136 (320)
++++|++++.|+.|||++++++|+++|.+ +| |+++++ ++|||+++|||+|++|+|||||+++|||||+++
T Consensus 4 vtlPg~~~~~G~~HPl~~~~~~i~~if~~-----~G---F~~~~g-p~ies~~~NFDaLn~P~dHPAR~~~DTfYi~~~~ 74 (266)
T d1jjca_ 4 VSLPGASLFSGGLHPITLMERELVEIFRA-----LG---YQAVEG-PEVESEFFNFDALNIPEHHPARDMWDTFWLTGEG 74 (266)
T ss_dssp TTSCCCCCCCCBCCHHHHHHHHHHHHHHT-----TT---CEECCC-CSEEEHHHHTGGGTCCTTSGGGGGSCCCBEECSS
T ss_pred eeCCCCCCCCCCCChHHHHHHHHHHHHHH-----cC---CeEeeC-CccccchhhhhcccCCcccchhcccceEEEeccc
Confidence 46889999999999999999999999974 35 999998 899999999999999999999999999999854
Q ss_pred --------------ccccccCchhhHHHHHcCCC--eEEEecccccCCCcCCCCCCcceeeeEEEEeeccccccCccCcc
Q psy7414 137 --------------YLLRAHTTAHQSELIRMGLD--NFVVFGDVYRRDQIDSTHFPVFHQADGVHLLNRDQVSRGDIGVG 200 (320)
Q Consensus 137 --------------~lLRTHTSAhq~~~l~~~~~--~~l~~GdVYRRDeID~tHyPvFHQmEG~~v~~~~~l~~~~~~~~ 200 (320)
+||||||||||++.|.++.+ +++++|+|||||+||+||+|+||||||++++
T Consensus 75 ~~~~~~~~~~~~~~~lLRTHTS~~q~r~~~~~~~p~~~~~~g~VyRrd~iD~tH~p~FhQ~eg~~vd------------- 141 (266)
T d1jjca_ 75 FRLEGPLGEEVEGRLLLRTHTSPMQVRYMVAHTPPFRIVVPGRVFRFEQTDATHEAVFHQLEGLVVG------------- 141 (266)
T ss_dssp CCEECTTSCEECSCEEECSSSTHHHHHHHHHSCSSEEEEEEEEEECCSCCCSSCCSEEEEEEEEEEE-------------
T ss_pred ccccCcccccchhhhhhccCCcHHHHHHHhccCCCceEEecccceecCCCCCcccccceeeeeeecc-------------
Confidence 69999999999999988764 8999999999999999999999999999994
Q ss_pred cccceecccCCCchhhhhhhhccccccccCcceeeeecCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHhCCCccE
Q psy7414 201 TSLKIMTIFTPTSQEYFYIKKCNKISESIGQNIVIFEQGGVHTDEKQARHTLDATKVMEQKLKNSLVKLAKILFGDDIQM 280 (320)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~q~~h~~~~~~~v~~~LK~tLe~lv~~lFg~~~~~ 280 (320)
++++ .+|||++|+.|++++||+++++
T Consensus 142 ------------------------------~~~~------------------------~~~Lk~~l~~~~~~~f~~~~~~ 167 (266)
T d1jjca_ 142 ------------------------------EGIA------------------------MAHLKGAIYELAQALFGPDSKV 167 (266)
T ss_dssp ------------------------------TTCC------------------------HHHHHHHHHHHHHHHHCTTCCE
T ss_pred ------------------------------cccc------------------------HHHHHHHHHHHHHHhcCCCcEE
Confidence 2233 2799999999999999999999
Q ss_pred EEeccCCCCCCCceEEEeee--CCceEEEeecccccccccC
Q psy7414 281 RWISEYFPFTHPSWELEILL--NDKWVEILGCGVIRHEILD 319 (320)
Q Consensus 281 Rw~~ayFPFTePS~EleV~~--~g~WLEvLGCGvv~~~vL~ 319 (320)
||+|+||||||||+||+|+| .|+|||||||||++|+||+
T Consensus 168 R~~p~yFPFTePS~Ev~v~~~~~~~WlEilG~Gmv~p~vL~ 208 (266)
T d1jjca_ 168 RFQPVYFPFVEPGAQFAVWWPEGGKWLELGGAGMVHPKVFQ 208 (266)
T ss_dssp EEEECCCTTEEEEEEEEEEEGGGTEEEEEEEEEEECHHHHH
T ss_pred EEecccCCCccCCcceEEEEeecCCcceEEeecccCHHHHH
Confidence 99999999999999999999 5789999999999999985
No 2
>d1eova2 d.104.1.1 (A:205-557) Aspartyl-tRNA synthetase (AspRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.66 E-value=0.00018 Score=66.08 Aligned_cols=91 Identities=14% Similarity=0.232 Sum_probs=61.5
Q ss_pred HHHHHHHHHhhcccCCCCCCceEEecCCCCeecceeccccCCCCCCCCCCCCCccccccccccccccCchhh--HHHHHc
Q psy7414 76 LKQRIINFFYSEFVGKKGTPIFSIYDSISPVVTVEENFDSLLVAKDHVSRSKNDCYYVNREYLLRAHTTAHQ--SELIRM 153 (320)
Q Consensus 76 l~~~I~~~F~~~~~~~~g~p~F~~~~~~~pVVs~~~NFD~L~~P~DHPsR~~~DTyYin~~~lLRTHTSAhq--~~~l~~ 153 (320)
+.+.|+++|.+. | |-.++. |+.+... --.+.+.-.+-|.++..-||+ |.-. .+++..
T Consensus 50 i~~~iR~ff~~~-----g---flEV~T--PiL~~~~---------~eg~~~~f~~~~~~~~~yL~~--Spel~lk~ll~~ 108 (353)
T d1eova2 50 VCELFREYLATK-----K---FTEVHT--PKLLGAP---------SEGGSSVFEVTYFKGKAYLAQ--SPQFNKQQLIVA 108 (353)
T ss_dssp HHHHHHHHHHHT-----T---CEECCC--CSEESSC---------SSSSSCCCEEEETTEEEEECS--CTHHHHHHHHHT
T ss_pred HHHHHHHHHHHC-----C---CEEEEC--CccCCCC---------CcchhccccceeeCCcceecc--chhhhhhhhhhc
Confidence 456677888653 5 888875 5542211 012233333334455555655 4433 367778
Q ss_pred CCCeEEEecccccCCCcCCC-CCCcceeeeEEEEe
Q psy7414 154 GLDNFVVFGDVYRRDQIDST-HFPVFHQADGVHLL 187 (320)
Q Consensus 154 ~~~~~l~~GdVYRRDeID~t-HyPvFHQmEG~~v~ 187 (320)
|.++++-+|.|||++.+|++ |.|+|.|+|--+.+
T Consensus 109 g~~~vf~I~~~FR~E~~~~~rH~pEFtmLE~y~a~ 143 (353)
T d1eova2 109 DFERVYEIGPVFRAENSNTHRHMTEFTGLDMEMAF 143 (353)
T ss_dssp TCCEEEEEEEEECCCCCCCTTCCSEEEEEEEEEEC
T ss_pred ccccceeechhhhccccccccccchhccccccccc
Confidence 89999999999999999985 99999999999886
No 3
>d1c0aa3 d.104.1.1 (A:107-287,A:421-585) Aspartyl-tRNA synthetase (AspRS) {Escherichia coli [TaxId: 562]}
Probab=97.61 E-value=0.00016 Score=66.76 Aligned_cols=39 Identities=21% Similarity=0.369 Sum_probs=35.4
Q ss_pred HHHHcCCCeEEEecccccCCCcCCCCCCcceeeeEEEEe
Q psy7414 149 ELIRMGLDNFVVFGDVYRRDQIDSTHFPVFHQADGVHLL 187 (320)
Q Consensus 149 ~~l~~~~~~~l~~GdVYRRDeID~tHyPvFHQmEG~~v~ 187 (320)
+++..|.++++-+|.|||.+++|++|.|+|.|+|--+.|
T Consensus 94 ~ll~~g~~~Vf~i~~~FR~E~~~~~H~~EFtmLE~e~a~ 132 (346)
T d1c0aa3 94 LLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSF 132 (346)
T ss_dssp HHHHTTCCEEEEEEEEECCCCCBTTBCSEEEEEEEEEES
T ss_pred HHhhcCCCceEEEeeeccccccCchhhhHhhhhcccccc
Confidence 566788999999999999999999999999999977665
No 4
>d1nnha_ d.104.1.1 (A:) Hypothetical protein PF1951 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=97.55 E-value=0.00043 Score=62.73 Aligned_cols=95 Identities=18% Similarity=0.153 Sum_probs=58.2
Q ss_pred HHHHHHHHHHhhcccCCCCCCceEEecCCCCeecceeccccCCCCCCC-CCCCCCccc---cccccccccccCch--hhH
Q psy7414 75 MLKQRIINFFYSEFVGKKGTPIFSIYDSISPVVTVEENFDSLLVAKDH-VSRSKNDCY---YVNREYLLRAHTTA--HQS 148 (320)
Q Consensus 75 il~~~I~~~F~~~~~~~~g~p~F~~~~~~~pVVs~~~NFD~L~~P~DH-PsR~~~DTy---Yin~~~lLRTHTSA--hq~ 148 (320)
.+.+.|+++|.+. | |..++ .||.+. -.-|.++ |+.+..+.+ |.++..-| |||+ +-.
T Consensus 19 ~i~~~iR~ff~~~-----g---f~EV~--tPil~~------~~~~~~~~~~~~~~~~~~~~~~~~~~yL--~~SPel~lk 80 (293)
T d1nnha_ 19 KILEYMTDFFVKE-----G---FKWLL--PVIISP------ITDPLWPDPAGEGMEPAEVEIYGVKMRL--THSMILHKQ 80 (293)
T ss_dssp HHHHHHHHHHHHT-----T---CEEEC--CCCEES------CCCCCCSCTTCCCCCCCEEEETTEEEEE--CSCSHHHHH
T ss_pred HHHHHHHHHHHHC-----C---CEEEc--CCcccc------cCCCCCCccccCccccccccCCCceeec--ccChhhhHH
Confidence 3556677777653 5 88875 477652 1112222 223333322 22344344 4454 223
Q ss_pred HHHHcCCCeEEEecccccCCCcCCC---CCCcceeeeEEEEe
Q psy7414 149 ELIRMGLDNFVVFGDVYRRDQIDST---HFPVFHQADGVHLL 187 (320)
Q Consensus 149 ~~l~~~~~~~l~~GdVYRRDeID~t---HyPvFHQmEG~~v~ 187 (320)
++|..|.++++-+|.|||.+..+++ |.|+|.|+|--+.+
T Consensus 81 ~lla~g~~~Vf~I~~~FR~E~~~s~t~RH~~EFtmLE~e~~~ 122 (293)
T d1nnha_ 81 LAIAMGLKKIFVLSPNIRLESRQKDDGRHAYEFTQLDFEVER 122 (293)
T ss_dssp HHHHTTCCEEEEEEEEECCCCGGGCSSSCCSEEEEEEEEEET
T ss_pred HHHHhccccceeechhhhcCcccCCCCccchhhhhhcccccc
Confidence 5678899999999999998777664 99999999954443
No 5
>d1b8aa2 d.104.1.1 (A:104-438) Aspartyl-tRNA synthetase (AspRS) {Archaeon Pyrococcus kodakaraensis [TaxId: 311400]}
Probab=97.27 E-value=0.00038 Score=63.26 Aligned_cols=93 Identities=15% Similarity=0.256 Sum_probs=60.4
Q ss_pred HHHHHHHHHhhcccCCCCCCceEEecCCCCeecceeccccCCCCCCCCCCCCCccccccccccccccCchhhHHHHHcCC
Q psy7414 76 LKQRIINFFYSEFVGKKGTPIFSIYDSISPVVTVEENFDSLLVAKDHVSRSKNDCYYVNREYLLRAHTTAHQSELIRMGL 155 (320)
Q Consensus 76 l~~~I~~~F~~~~~~~~g~p~F~~~~~~~pVVs~~~NFD~L~~P~DHPsR~~~DTyYin~~~lLRTHTSAhq~~~l~~~~ 155 (320)
+.+.|+++|.+. | |-.++. |+.+....- ++...--+-|.+++.-|||=.-.+-.++|..|.
T Consensus 40 i~~~iR~ff~~~-----g---flEV~T--Pil~~~~~~---------~~~~~f~~~~~~~~~yL~~SpE~~lkrll~~g~ 100 (335)
T d1b8aa2 40 VFKAVRDFFHEN-----G---FIEIHT--PKIIATATE---------GGTELFPMKYFEEDAFLAESPQLYKEIMMASGL 100 (335)
T ss_dssp HHHHHHHHHHHT-----T---CEECCC--CSEESCCCS---------SSSSCCEEEETTEEEEECSCSHHHHHHGGGTTC
T ss_pred HHHHHHHHHHHC-----C---CEEEEC--CccCccCCc---------hhhhhccccccccccccccChHHHHHHHHhhhh
Confidence 556677888653 5 888875 655322110 111112223344455565433233336677889
Q ss_pred CeEEEecccccCCCcCCC-CCCcceeeeEEEEe
Q psy7414 156 DNFVVFGDVYRRDQIDST-HFPVFHQADGVHLL 187 (320)
Q Consensus 156 ~~~l~~GdVYRRDeID~t-HyPvFHQmEG~~v~ 187 (320)
++++-+|.|||+++.+++ |.+.|+|+|....+
T Consensus 101 ~~if~i~~~FR~e~~~~~rh~~Ef~~le~~~~~ 133 (335)
T d1b8aa2 101 DRVYEIAPIFRAEEHNTTRHLNEAWSIDSEMAF 133 (335)
T ss_dssp CEEEEEEEEECCCSSCCSSCCSEEEEEEEEEES
T ss_pred hhHHHhhcccccccccccccchHHHhhhHHHHH
Confidence 999999999999999986 88899999999886
No 6
>d1l0wa3 d.104.1.1 (A:105-294,A:415-580) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-1 [TaxId: 274]}
Probab=97.14 E-value=0.0015 Score=60.37 Aligned_cols=40 Identities=23% Similarity=0.394 Sum_probs=36.7
Q ss_pred HHHHHcCCCeEEEecccccCCCcCCCCCCcceeeeEEEEe
Q psy7414 148 SELIRMGLDNFVVFGDVYRRDQIDSTHFPVFHQADGVHLL 187 (320)
Q Consensus 148 ~~~l~~~~~~~l~~GdVYRRDeID~tHyPvFHQmEG~~v~ 187 (320)
.+++..|..+++-+|.|||.+++|++|.|+|.|+|--+.+
T Consensus 101 k~ll~~g~~~Vf~i~~~FRaE~~~t~H~~EFtmLE~e~~~ 140 (356)
T d1l0wa3 101 QMLMVAGLDRYFQIARCFRDEDLRADRQPDFTQLDLEMSF 140 (356)
T ss_dssp HHHHHTTCSEEEEEEEEECCCCCCSSCCSEEEEEEEEEES
T ss_pred HHhhhcccCcEEEEeccccccccCCcchhhhhHHHHhhhH
Confidence 3567788999999999999999999999999999999886
No 7
>d1e1oa2 d.104.1.1 (A:161-502) Lysyl-tRNA synthetase (LysRS) {Escherichia coli, gene lysU [TaxId: 562]}
Probab=97.06 E-value=0.0022 Score=58.41 Aligned_cols=45 Identities=16% Similarity=0.234 Sum_probs=37.7
Q ss_pred CchhhH--HHHHcCCCeEEEecccccCCCcCCCCCCcceeeeEEEEe
Q psy7414 143 TTAHQS--ELIRMGLDNFVVFGDVYRRDQIDSTHFPVFHQADGVHLL 187 (320)
Q Consensus 143 TSAhq~--~~l~~~~~~~l~~GdVYRRDeID~tHyPvFHQmEG~~v~ 187 (320)
+|+-+. .+|..|.++++-+|.|||.++.++.|.|+|.|+|.-+.|
T Consensus 77 ~Spql~~k~~l~~g~~~vf~i~p~FR~E~~~~rHl~EFtmlE~e~a~ 123 (342)
T d1e1oa2 77 IAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAY 123 (342)
T ss_dssp SCSHHHHHHHHHHTCCEEEEEEEEECCCCCCC-CCSEEEEEEEEEES
T ss_pred hhhHHHHHHHhhhcccceeeeccccccccccccchHHHHHHHHHHHh
Confidence 454443 366778999999999999999999999999999999987
No 8
>d1n9wa2 d.104.1.1 (A:111-414) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-2 [TaxId: 274]}
Probab=96.51 E-value=0.00088 Score=60.05 Aligned_cols=92 Identities=13% Similarity=0.153 Sum_probs=38.9
Q ss_pred HHHHHHHHHHhhcccCCCCCCceEEecCCCCeecceeccccCCCCCCCCCCCCCccccccccccccccCchhh-HHHHHc
Q psy7414 75 MLKQRIINFFYSEFVGKKGTPIFSIYDSISPVVTVEENFDSLLVAKDHVSRSKNDCYYVNREYLLRAHTTAHQ-SELIRM 153 (320)
Q Consensus 75 il~~~I~~~F~~~~~~~~g~p~F~~~~~~~pVVs~~~NFD~L~~P~DHPsR~~~DTyYin~~~lLRTHTSAhq-~~~l~~ 153 (320)
.+...|+++|.+. | |-.++. |+.+... +.+++ ..-.+=|.+++.-|++ |.-. .+++..
T Consensus 20 ~i~~~iR~ff~~~-----g---f~Ev~T--P~l~~~~-------~e~~~--~~f~~~~~~~~~~L~~--Spel~k~ll~~ 78 (304)
T d1n9wa2 20 ALVRGFRRYLDRQ-----D---FTEIFT--PKVVRAG-------AEGGS--GLFGVDYFEKRAYLAQ--SPQLYKQIMVG 78 (304)
T ss_dssp HHHHHHHHHHHHT-----T---CEECCC--C---------------------------------------CHHHHHHHHH
T ss_pred HHHHHHHHHHHHC-----C---CEEEEC--CccCCCC-------CCCCC--ceECCcccccchhccc--cHHHHHHHhhc
Confidence 4667788888753 5 877765 6664321 11111 1111112244444543 3322 356667
Q ss_pred CCCeEEEecccccCCCc-CCCCCCcceeeeEEEEe
Q psy7414 154 GLDNFVVFGDVYRRDQI-DSTHFPVFHQADGVHLL 187 (320)
Q Consensus 154 ~~~~~l~~GdVYRRDeI-D~tHyPvFHQmEG~~v~ 187 (320)
|.++++-+|.|||.++. +..|.|.|.|||--+.+
T Consensus 79 g~~~if~i~~~FR~ee~~~~rh~~EF~~le~~~~~ 113 (304)
T d1n9wa2 79 VFERVYEVAPVWRMEEHHTSRHLNEYLSLDVEMGF 113 (304)
T ss_dssp HHSEEEEEEEC-------------CCEEEEEEEES
T ss_pred ccccceeehhhcccccccccccccHHHHHHHHHhh
Confidence 77899999999998875 45799999999987775
No 9
>d1jjcb5 d.104.1.1 (B:475-681) Phenyl-tRNA synthetase (PheRS) beta subunit, PheT, central domain {Thermus thermophilus [TaxId: 274]}
Probab=95.39 E-value=0.028 Score=47.51 Aligned_cols=56 Identities=30% Similarity=0.386 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHHhCCCccEEEeccCCCCCCCceEEEeeeCCceEEEeecccccccccC
Q psy7414 259 EQKLKNSLVKLAKILFGDDIQMRWISEYFPFTHPSWELEILLNDKWVEILGCGVIRHEILD 319 (320)
Q Consensus 259 ~~~LK~tLe~lv~~lFg~~~~~Rw~~ayFPFTePS~EleV~~~g~WLEvLGCGvv~~~vL~ 319 (320)
..++|+.++.++..+ | +..++.+.-.|+-+|+.-.+|+.+|+ +|+=+|.++|++++
T Consensus 132 f~~~Kg~v~~ll~~l-g--~~~~~~~~~~~~~hpg~~a~I~~~~~--~iG~~G~l~p~i~~ 187 (207)
T d1jjcb5 132 YFLLKGYLEALFARL-G--LAFRVEAQAFPFLHPGVSGRVLVEGE--EVGFLGALHPEIAQ 187 (207)
T ss_dssp HHHHHHHHHHHHHHH-T--CCEEEEECCCTTEEEEEEEEEEESSS--EEEEEEEECHHHHH
T ss_pred HHHHHHHHHHHHHhh-h--cccccccccCCccCCCeEEEEEECCe--EEEEEEEECHHHHH
Confidence 368999999999886 4 57888888899999999999999997 45668999999875
No 10
>d1z7ma1 d.104.1.1 (A:6-323) ATP phosphoribosyltransferase regulatory subunit HisZ {Lactococcus lactis [TaxId: 1358]}
Probab=93.64 E-value=0.058 Score=47.41 Aligned_cols=103 Identities=14% Similarity=0.142 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCceEEecCCCCeecceeccccCCCCCCCCCCCCCcccccc----ccccccccCchhhH
Q psy7414 73 LCMLKQRIINFFYSEFVGKKGTPIFSIYDSISPVVTVEENFDSLLVAKDHVSRSKNDCYYVN----REYLLRAHTTAHQS 148 (320)
Q Consensus 73 l~il~~~I~~~F~~~~~~~~g~p~F~~~~~~~pVVs~~~NFD~L~~P~DHPsR~~~DTyYin----~~~lLRTHTSAhq~ 148 (320)
...+.+.|.+.|.+ +| |..++. |++...+.|-.+.-..+...++ +-|-+. +..+||.-.|+--+
T Consensus 18 ~~~i~~~l~~~f~~-----~G---y~~I~t--P~~E~~d~~~~~~~~~~~~~~~--~~~~~~d~~g~~l~LRpD~T~~ia 85 (318)
T d1z7ma1 18 LRQIEGRLRKLFSL-----KN---YQEVMP--PSFEYTQLYTALESNGKTFNQE--KMFQFIKHEGQSITLRYDFTLPLV 85 (318)
T ss_dssp HHHHHHHHHHHHHH-----TT---CEECCC--CSEEEHHHHHHHHCSSSCCCTT--SCCEEECTTCCEEEECCCSHHHHH
T ss_pred HHHHHHHHHHHHHH-----cC---CEEEEC--CccchHHHhhccCCCccccccc--ceeEeecCCccEEEeeccccchHH
Confidence 34566677777754 46 888864 6665444553322222221111 123221 34679998888777
Q ss_pred HHHHcC----CCeEEEecccccCCCcCCCCCCcceeeeEEEEe
Q psy7414 149 ELIRMG----LDNFVVFGDVYRRDQIDSTHFPVFHQADGVHLL 187 (320)
Q Consensus 149 ~~l~~~----~~~~l~~GdVYRRDeID~tHyPvFHQmEG~~v~ 187 (320)
|...+. +.++...|.|||++.....++-+|+|+..=.+.
T Consensus 86 R~~~~~~~~~~~r~~Y~g~vfR~~~~~~~r~rE~~Q~g~EiiG 128 (318)
T d1z7ma1 86 RLYSQIKDSTSARYSYFGKIFRKEKRHKGRSTENYQIGIELFG 128 (318)
T ss_dssp HHHHTCCSCCCEEEEEEEECCCCCC-------CCEEEEEEEES
T ss_pred HHHHHhcccCCcccccccceeEEccccccccchhhhhheeccc
Confidence 776432 238889999999999888899999998544443
No 11
>d1wu7a2 d.104.1.1 (A:3-329) Histidyl-tRNA synthetase (HisRS) {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=92.29 E-value=0.2 Score=44.10 Aligned_cols=101 Identities=15% Similarity=0.183 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHhhcccCCCCCCceEEecCCCCeecceeccccCCCCCCCCCCCCCcccc-c---cccccccccCchhhHH
Q psy7414 74 CMLKQRIINFFYSEFVGKKGTPIFSIYDSISPVVTVEENFDSLLVAKDHVSRSKNDCYY-V---NREYLLRAHTTAHQSE 149 (320)
Q Consensus 74 ~il~~~I~~~F~~~~~~~~g~p~F~~~~~~~pVVs~~~NFD~L~~P~DHPsR~~~DTyY-i---n~~~lLRTHTSAhq~~ 149 (320)
..+++.|++.|.+ .| |..+.. |++...+.|-.. ...+ ....+|= + .+..+||.=+|+..++
T Consensus 22 ~~i~~~l~~~f~~-----~G---y~~I~t--P~lE~~d~~~~~-~g~~----~~~~~~~f~D~~g~~l~LRpD~T~~iar 86 (327)
T d1wu7a2 22 KFIFKTAEEAAEA-----FG---FRRIDF--PSLEYLDLYRIK-SGEE----LLQQTYSFVDKGGREVTLIPEATPSTVR 86 (327)
T ss_dssp HHHHHHHHHHHHH-----TT---CEECBC--CSEEETHHHHTT-SCTT----GGGGSCEEECTTSCEEEECSCSHHHHHH
T ss_pred HHHHHHHHHHHHH-----cC---CeEeEC--CccchHhhcccc-Cchh----HHHHHhhhhcccchhhcccccccchhhh
Confidence 4456667777754 46 887764 544333333211 1111 1122232 2 2457899999988888
Q ss_pred HHHcC-----CCeEEEecccccCCCcCCCCCCcceeeeEEEEeecc
Q psy7414 150 LIRMG-----LDNFVVFGDVYRRDQIDSTHFPVFHQADGVHLLNRD 190 (320)
Q Consensus 150 ~l~~~-----~~~~l~~GdVYRRDeID~tHyPvFHQmEG~~v~~~~ 190 (320)
...+. +-++...|.|||++.....++-+|+|+ |+-++..+
T Consensus 87 ~~~~~~~~~~p~k~~y~g~VfR~~~~~~g~~re~~Q~-G~EiiG~~ 131 (327)
T d1wu7a2 87 MVTSRKDLQRPLRWYSFPKVWRYEEPQAGRYREHYQF-NADIFGSD 131 (327)
T ss_dssp HHTTCTTCCSSEEEEECCEEECCCCSCSSCCSEEEEE-EEEEESCC
T ss_pred HhhhhhhccccceeeccCcceeccccccCCcchhhhh-hhhhcCCc
Confidence 77542 138999999999998888899999999 77776444
No 12
>d1nj8a3 d.104.1.1 (A:0-267) Prolyl-tRNA synthetase (ProRS) {Archaeon (Methanocaldococcus jannaschii) [TaxId: 2190]}
Probab=89.86 E-value=4.2 Score=34.72 Aligned_cols=108 Identities=10% Similarity=0.143 Sum_probs=65.4
Q ss_pred CCChHHH-HHHHHHHHHhhcccCCCCCCceEEecCCCCeec--c-------eeccccCCCCCCCCCCCCCcccccccccc
Q psy7414 69 KYHPLCM-LKQRIINFFYSEFVGKKGTPIFSIYDSISPVVT--V-------EENFDSLLVAKDHVSRSKNDCYYVNREYL 138 (320)
Q Consensus 69 ~~HPl~i-l~~~I~~~F~~~~~~~~g~p~F~~~~~~~pVVs--~-------~~NFD~L~~P~DHPsR~~~DTyYin~~~l 138 (320)
-.+|.+. ++++|++++.+.+. +.| |..+.. |-+++ . +..|+.-.++..+.+++..|. .++
T Consensus 29 ~~lP~G~~i~~~i~~~i~~~~~-~~G---~~ev~~-P~l~~~~l~~ks~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 98 (268)
T d1nj8a3 29 VYLPYGFKIRRYTFEIIRNLLD-ESG---HDEALF-PMLIPEDLLAKEAEHIKGFEDEVYWVTHGGKTQLDV-----KLA 98 (268)
T ss_dssp BBCHHHHHHHHHHHHHHHHHHH-HTT---CEECBC-CSEEEHHHHHHHCSSSGGGGGGCEEEEESSSSEEEE-----EEE
T ss_pred EECccHHHHHHHHHHHHHHHHH-HcC---CeEEee-hhhhhhHhhhccCCCccccccceeEEeccccccchh-----hhh
Confidence 4577776 66888887765432 335 877754 33331 1 224555555555556655543 356
Q ss_pred ccccCchhhHHHHHcC-------CCeEEEecccccCCCcCCCC----CCcceeeeEEEEe
Q psy7414 139 LRAHTTAHQSELIRMG-------LDNFVVFGDVYRRDQIDSTH----FPVFHQADGVHLL 187 (320)
Q Consensus 139 LRTHTSAhq~~~l~~~-------~~~~l~~GdVYRRDeID~tH----yPvFHQmEG~~v~ 187 (320)
||.=.-.+-..++++. +-++.-.|.|||.+. -.+| .-.|+|||...++
T Consensus 99 L~P~~~~~~~~i~~~~~~Syr~LP~r~~e~~~~fR~E~-~~~~GllR~reF~~~dd~~~~ 157 (268)
T d1nj8a3 99 LRPTSETPIYYMMKLWVKVHTDLPIKIYQIVNTFRYET-KHTRPLIRLREIMTFKEAHTA 157 (268)
T ss_dssp ECSSSHHHHHHHHHTTCCBTTSCCCCEEEEECCBCCCC-SCCBTTTBCSBCSCEEEEEEE
T ss_pred cccCCCchhHHhhhhhccchhhhheEEeeccccccccc-cccccceeEEEEeeechhcee
Confidence 7743334445555432 237888999999995 3333 4569999998886
No 13
>d1seta2 d.104.1.1 (A:111-421) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=89.63 E-value=3.3 Score=36.81 Aligned_cols=166 Identities=16% Similarity=0.272 Sum_probs=98.5
Q ss_pred ChHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCeecceeccccCCCCCCCCCCCCCccccccc-cccccccCchhhHH
Q psy7414 71 HPLCMLKQRIINFFYSEFVGKKGTPIFSIYDSISPVVTVEENFDSLLVAKDHVSRSKNDCYYVNR-EYLLRAHTTAHQSE 149 (320)
Q Consensus 71 HPl~il~~~I~~~F~~~~~~~~g~p~F~~~~~~~pVVs~~~NFD~L~~P~DHPsR~~~DTyYin~-~~lLRTHTSAhq~~ 149 (320)
-.+..|-..+.+|+...... .| |..+. +|..-...-+..-++-++ ...|.|.+.+ ++.|+. ||-+-.-
T Consensus 53 g~~a~Le~AL~~~~ld~~~~-~g---y~~v~--~P~lv~~~~~~~~G~~p~----f~~~~y~~~~~~~~Lip-TsE~~l~ 121 (311)
T d1seta2 53 GDLALYELALLRFAMDFMAR-RG---FLPMT--LPSYAREKAFLGTGHFPA----YRDQVWAIAETDLYLTG-TAEVVLN 121 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-TT---CEEEE--CCSEEEHHHHHHHTCTTT----TGGGSCBBTTSSEEECS-STHHHHH
T ss_pred CHHHHHHHHHHHHHHHhhhc-cc---ceEEe--echhhccchhhhcccccc----cccccccccccceeecc-cccchhh
Confidence 35667777777777664432 35 88874 355433344444444443 2456777765 445553 4433333
Q ss_pred HHHcC--------CCeEEEecccccCCCc----CC---CCCCcceeeeEEEEeeccccccCccCcccccceecccCCCch
Q psy7414 150 LIRMG--------LDNFVVFGDVYRRDQI----DS---THFPVFHQADGVHLLNRDQVSRGDIGVGTSLKIMTIFTPTSQ 214 (320)
Q Consensus 150 ~l~~~--------~~~~l~~GdVYRRDeI----D~---tHyPvFHQmEG~~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 214 (320)
.|.+. +-++...+.|||++.= |. -...+|+++|.+.+-..
T Consensus 122 ~~~~~~i~~~~~LPlr~~~~s~cfR~Eag~~g~~trGL~RvhQF~kvE~~~~~~~------------------------- 176 (311)
T d1seta2 122 ALHSGEILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEA------------------------- 176 (311)
T ss_dssp HTTTTCEEEGGGCSEEEEEEEEEECCCCSCTTSSCSTTSSCSEEEEEEEEEEECS-------------------------
T ss_pred hhhhhhhhhhhhccceEEeecccchhhhccccccchhhhhhcccchhhhheeecc-------------------------
Confidence 33222 2379999999999851 11 12256777777655200
Q ss_pred hhhhhhhccccccccCcceeeeecCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHhCCCccEEEec----cCCCCC
Q psy7414 215 EYFYIKKCNKISESIGQNIVIFEQGGVHTDEKQARHTLDATKVMEQKLKNSLVKLAKILFGDDIQMRWIS----EYFPFT 290 (320)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~q~~h~~~~~~~v~~~LK~tLe~lv~~lFg~~~~~Rw~~----ayFPFT 290 (320)
+++++.....+|....+.+.+.| ++..|++. .-++.-
T Consensus 177 ------------------------------------~~e~s~~~~~~~~~~~~~~~~~L---~lpyrvv~~~~~dl~~~a 217 (311)
T d1seta2 177 ------------------------------------SLEASDRAFQELLENAEEILRLL---ELPYRLVEVATGDMGPGK 217 (311)
T ss_dssp ------------------------------------CHHHHHHHHHHHHHHHHHHHHHT---TCCEEEEECCTTTSCTTC
T ss_pred ------------------------------------ccccchhHHHHHHHHHHHHHHhh---CCcchhccccCCCCchHH
Confidence 12333333456666677777776 56677764 456666
Q ss_pred CCceEEEeeeC--CceEEEeecc
Q psy7414 291 HPSWELEILLN--DKWVEILGCG 311 (320)
Q Consensus 291 ePS~EleV~~~--g~WLEvLGCG 311 (320)
.=.+-+|+|-. |+|+||..|-
T Consensus 218 ~~~~diE~w~P~~~~y~Ev~S~s 240 (311)
T d1seta2 218 WRQVDIEVYLPSEGRYRETHSCS 240 (311)
T ss_dssp SEEEEEEEEEGGGTEEEEEEEEE
T ss_pred HhhhHHHHhHhhcCCcccccCce
Confidence 66778899885 7899998864
No 14
>d1h4vb2 d.104.1.1 (B:2-325) Histidyl-tRNA synthetase (HisRS) {Thermus thermophilus [TaxId: 274]}
Probab=88.35 E-value=1 Score=39.20 Aligned_cols=101 Identities=17% Similarity=0.206 Sum_probs=60.5
Q ss_pred HHHHHHHHHHhhcccCCCCCCceEEecCCCCeecceeccccCCCCCCCCCCCCCccccc----cccccccccCchhhHHH
Q psy7414 75 MLKQRIINFFYSEFVGKKGTPIFSIYDSISPVVTVEENFDSLLVAKDHVSRSKNDCYYV----NREYLLRAHTTAHQSEL 150 (320)
Q Consensus 75 il~~~I~~~F~~~~~~~~g~p~F~~~~~~~pVVs~~~NFD~L~~P~DHPsR~~~DTyYi----n~~~lLRTHTSAhq~~~ 150 (320)
.+++.|.+.|.+ +| |..++. |++-..+.|-+..=+..+.-++. .|-+ ++..+||.=-|+-+++.
T Consensus 21 ~i~~~l~~~f~~-----~G---y~~I~t--P~lE~~d~l~~~~g~~~~~~~~~--~~~~~d~~g~~l~LRpD~T~~iar~ 88 (324)
T d1h4vb2 21 RIVATARKVLEA-----AG---ALELVT--PIFEETQVFEKGVGAATDIVRKE--MFTFQDRGGRSLTLRPEGTAAMVRA 88 (324)
T ss_dssp HHHHHHHHHHHH-----TT---CEECCC--CSEEEGGGGCCCSCC------CC--SCEEECTTSCEEEECCCSHHHHHHH
T ss_pred HHHHHHHHHHHH-----cC---CeEeeC--CccccHHHhhcccCCchhHHHHH--HhhhhccCCcccccccccccHHHHH
Confidence 345555555543 46 888764 66655555544332333333322 2322 34578999888888886
Q ss_pred HH-cC------CCeEEEecccccCCCcCCCCCCcceeeeEEEEe
Q psy7414 151 IR-MG------LDNFVVFGDVYRRDQIDSTHFPVFHQADGVHLL 187 (320)
Q Consensus 151 l~-~~------~~~~l~~GdVYRRDeID~tHyPvFHQmEG~~v~ 187 (320)
.. .+ +-++.++|+|||.+..-.-.+-+|+|+..=.+.
T Consensus 89 ~~~~~~~~~~~p~r~~Y~g~VfR~~~~~~gr~re~~Q~g~EiiG 132 (324)
T d1h4vb2 89 YLEHGMKVWPQPVRLWMAGPMFRAERPQKGRYRQFHQVNYEALG 132 (324)
T ss_dssp HHHTTGGGSSSSEEEEEEEEEECCCCC----CCEEEEEEEEEES
T ss_pred HHHhhhhhhchhhhheeeCcccccCcccCCCcceeccccccccC
Confidence 64 22 138999999999999888889999999777664
No 15
>d1g5ha2 d.104.1.1 (A:41-330) The aaRS-like accessory subunit of mitochondrial polymerase gamma, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=86.14 E-value=1.3 Score=39.08 Aligned_cols=49 Identities=6% Similarity=-0.243 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHhCC-CccEEEeccCCCCCCCceEEEeeeCCceEEEeec
Q psy7414 261 KLKNSLVKLAKILFGD-DIQMRWISEYFPFTHPSWELEILLNDKWVEILGC 310 (320)
Q Consensus 261 ~LK~tLe~lv~~lFg~-~~~~Rw~~ayFPFTePS~EleV~~~g~WLEvLGC 310 (320)
.++.....+.+. ||- +-.+|+...---+..-.+++++....+|.|+-||
T Consensus 188 ~~~~~~~~~~~~-lGi~~~~~~~~~~~~~~a~~~~die~~~p~g~~Ei~g~ 237 (290)
T d1g5ha2 188 FWLRHRLLWWRK-FAMSPSNFSSADCQDELGRKGSKLYYSFPWGKEPIETL 237 (290)
T ss_dssp HHHHHHHHHHHT-TCSSGGGEEEEEEECTTSCEEEEEEEEETTEEEEEEEE
T ss_pred HHHHHHHHHHHH-cCCChhheeecccchhhcccceeeEEcCCCCEEEEEEe
Confidence 344444444444 352 3356665433345667788888888899999986
No 16
>d1qe0a2 d.104.1.1 (A:1-325) Histidyl-tRNA synthetase (HisRS) {Staphylococcus aureus [TaxId: 1280]}
Probab=84.47 E-value=0.61 Score=40.66 Aligned_cols=53 Identities=17% Similarity=0.121 Sum_probs=33.9
Q ss_pred ccccccccCchhhHHHHH-cC-------CCeEEEecccccCCCcCCCCCCcceeeeEEEEe
Q psy7414 135 REYLLRAHTTAHQSELIR-MG-------LDNFVVFGDVYRRDQIDSTHFPVFHQADGVHLL 187 (320)
Q Consensus 135 ~~~lLRTHTSAhq~~~l~-~~-------~~~~l~~GdVYRRDeID~tHyPvFHQmEG~~v~ 187 (320)
...+||.--++-+++... .. +-|+.++|.|||++.-...++-+|+|+..=.+.
T Consensus 73 ~~~~lr~d~t~~~~r~~~~~~~~~~~~~p~R~~Y~g~VfR~~~~~~~~~rE~~Q~G~EiiG 133 (325)
T d1qe0a2 73 RSITLRPEGTAAVVRSYIEHKMQGNPNQPIKLYYNGPMFRYERKQKGRYRQFNQFGVEAIG 133 (325)
T ss_dssp CCEEECSCSHHHHHHHHHHTTGGGCSSCSEEEEEEEEEECC-------CCEEEEEEEEEES
T ss_pred ccccccccccccHHHHHHhhccccccccchhhheecceeeeccccCCccceeeecceeecC
Confidence 467899987777776543 21 138999999999998788888999998555443
No 17
>d1b76a2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus [TaxId: 274]}
Probab=79.71 E-value=17 Score=31.72 Aligned_cols=30 Identities=20% Similarity=0.422 Sum_probs=22.1
Q ss_pred eEEEecccccCCCcCCCCC----CcceeeeEEEEe
Q psy7414 157 NFVVFGDVYRRDQIDSTHF----PVFHQADGVHLL 187 (320)
Q Consensus 157 ~~l~~GdVYRRDeID~tHy----PvFHQmEG~~v~ 187 (320)
++.-+|.|||++ +-..|- -.|.|+|+-...
T Consensus 148 ~~aqig~~fR~E-~s~~~gl~RvReFtq~D~~~F~ 181 (331)
T d1b76a2 148 GIAQIGKAFRNE-ITPRNFIFRVREFEQMEIEYFV 181 (331)
T ss_dssp EEEEEEEEECCC-SSCCTTTTSCSEEEEEEEEEEE
T ss_pred hhhhccceeccc-ccccccccccchhhhhhhhhhc
Confidence 777799999876 666653 268888887664
No 18
>d1atia2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus [TaxId: 274]}
Probab=78.35 E-value=7.5 Score=35.86 Aligned_cols=33 Identities=6% Similarity=0.033 Sum_probs=24.7
Q ss_pred ccEEEecc----CCCCCCCceEEEeeeCCceEEEeec
Q psy7414 278 IQMRWISE----YFPFTHPSWELEILLNDKWVEILGC 310 (320)
Q Consensus 278 ~~~Rw~~a----yFPFTePS~EleV~~~g~WLEvLGC 310 (320)
-++|++.- -=-|..-.|.+|+.+.-+|.|+-||
T Consensus 272 ~~lrfrqh~~~ElAHYa~~~~DiE~~fp~Gw~El~Gi 308 (394)
T d1atia2 272 ENLVPYQQPPESSAHYAKATVDILYRFPHGSLELEGI 308 (394)
T ss_dssp GGEEEEECCTTTSCTTCSEEEEEEEEETTEEEEEEEE
T ss_pred cceeEEeecchhhhhcccceEEEEEecCCCcEechhh
Confidence 35777652 1235788899999888899999987
No 19
>d1nj1a3 d.104.1.1 (A:19-283) Prolyl-tRNA synthetase (ProRS) {Arhaeon (Methanothermobacter thermautotrophicus) [TaxId: 145262]}
Probab=68.95 E-value=25 Score=29.14 Aligned_cols=108 Identities=15% Similarity=0.236 Sum_probs=56.7
Q ss_pred CCChHHH-HHHHHHHHHhhcccCCCCCCceEEecCCCCeecceeccccCCCCCCCCCCCCCccccc--------cccccc
Q psy7414 69 KYHPLCM-LKQRIINFFYSEFVGKKGTPIFSIYDSISPVVTVEENFDSLLVAKDHVSRSKNDCYYV--------NREYLL 139 (320)
Q Consensus 69 ~~HPl~i-l~~~I~~~F~~~~~~~~g~p~F~~~~~~~pVVs~~~NFD~L~~P~DHPsR~~~DTyYi--------n~~~lL 139 (320)
-.+|.+. ++++|+++..+. .. .| |..+.. |.+++. +.|---..|..=-..+.|.+ ++.++|
T Consensus 27 ~~lP~G~~i~~~i~~~~~~~-~~-~G---~~ev~~-P~l~~~----~~l~~~sgh~~~~~~e~f~~~~~~~~~~~~~~~L 96 (265)
T d1nj1a3 27 VWMPHGFMIRKNTLKILRRI-LD-RD---HEEVLF-PLLVPE----DELAKEAIHVKGFEDEVYWVTHGGLSKLQRKLAL 96 (265)
T ss_dssp EECHHHHHHHHHHHHHHHHH-HT-TT---CEECCC-CSEEEH----HHHTTSHHHHHHTTTTCCEEEEETTEEEEEEEEE
T ss_pred EEcccHHHHHHHHHHHHHHH-HH-hc---Cceehh-hhhhhh----hhhhhcccccccccccceeeeccCccccceeEEe
Confidence 3567765 777788877543 22 25 655533 334421 11111111111111233333 234678
Q ss_pred cccCchhhHHHHHcC------CC-eEEEecccccCCCcCCCC----CCcceeeeEEEEe
Q psy7414 140 RAHTTAHQSELIRMG------LD-NFVVFGDVYRRDQIDSTH----FPVFHQADGVHLL 187 (320)
Q Consensus 140 RTHTSAhq~~~l~~~------~~-~~l~~GdVYRRDeID~tH----yPvFHQmEG~~v~ 187 (320)
|.=.-.+...++++. ++ ++.-.|.+||++ +-.+| .-.|||||....+
T Consensus 97 ~pt~~~~~~~~~~~~~~SyrdLPlr~~q~~~~fR~E-~~~~~Gl~R~reF~~~~d~~~~ 154 (265)
T d1nj1a3 97 RPTSETVMYPMFALWVRSHTDLPMRFYQVVNTFRYE-TKHTRPLIRVREITTFKEAHTI 154 (265)
T ss_dssp CSSSHHHHHHHHHHHCCBTTTCCEEEEEEEEEECCC-CSCCBTTTBCSEEEEEEEEEEE
T ss_pred ecccccceEEeeeeeeccccccceEEEeeccceeee-cccCcCCEEEEEEEEeccceee
Confidence 873334444454321 23 677799999999 44443 3468999988876
No 20
>d1usya_ d.104.1.1 (A:) ATP phosphoribosyltransferase regulatory subunit HisZ {Thermotoga maritima [TaxId: 2336]}
Probab=66.71 E-value=0.97 Score=38.95 Aligned_cols=60 Identities=15% Similarity=0.140 Sum_probs=42.5
Q ss_pred CCccccccc---cccccccCchhhHHHHHcC----CCeEEEecccccCCCcCCCCCCcceeeeEEEEeecc
Q psy7414 127 KNDCYYVNR---EYLLRAHTTAHQSELIRMG----LDNFVVFGDVYRRDQIDSTHFPVFHQADGVHLLNRD 190 (320)
Q Consensus 127 ~~DTyYin~---~~lLRTHTSAhq~~~l~~~----~~~~l~~GdVYRRDeID~tHyPvFHQmEG~~v~~~~ 190 (320)
.++.++.++ ...||.=.|+--+|...+. +-++..+|+|||.+. ..+-+|+|+ |+-+...+
T Consensus 35 ~~~~~F~D~~g~~l~LRpD~T~~iaR~~~~~~~~~p~k~~Y~g~VfR~~~---~~~re~~Q~-G~EiiG~~ 101 (275)
T d1usya_ 35 PAGNFFLDRKGNLFSIREDFTKTVLNHRKRYSPDSQIKVWYADFVYRYSG---SDLVAEYQL-GLEKVPRN 101 (275)
T ss_dssp CCSSCEEETTSCEEEECCCHHHHHHHHHTTCTTCCCEEEECCEEEEEEET---TEEEEEEEE-EEEEESCC
T ss_pred cccceeEcCCCCEEEECCCCcHHHHHHHHHcCCCCCeeeeEEeeEEEeCC---Ccccceeec-Cceeechh
Confidence 444456653 4789999888777766432 238999999999875 346799999 77776543
No 21
>d1kmma2 d.104.1.1 (A:4-325) Histidyl-tRNA synthetase (HisRS) {Escherichia coli [TaxId: 562]}
Probab=63.70 E-value=3.4 Score=35.57 Aligned_cols=98 Identities=19% Similarity=0.274 Sum_probs=61.5
Q ss_pred HHHHHHHHHHhhcccCCCCCCceEEecCCCCeecceeccccCC-CCCCCCCCCCCccccc-----cccccccccCchhhH
Q psy7414 75 MLKQRIINFFYSEFVGKKGTPIFSIYDSISPVVTVEENFDSLL-VAKDHVSRSKNDCYYV-----NREYLLRAHTTAHQS 148 (320)
Q Consensus 75 il~~~I~~~F~~~~~~~~g~p~F~~~~~~~pVVs~~~NFD~L~-~P~DHPsR~~~DTyYi-----n~~~lLRTHTSAhq~ 148 (320)
.+++.|++.|. .+| |+.+.. |++.-.+.|-+.. -..+-+ .++.|. .+...||.=-|+-.+
T Consensus 21 ~i~~~l~~~f~-----~~G---y~~I~t--P~lE~~d~~~~~~g~~~~~~----~~~~~~~~d~~g~~l~Lr~D~T~~ia 86 (322)
T d1kmma2 21 RIEGTLKNVLG-----SYG---YSEIRL--PIVEQTPLFKRAIGEVTDVV----EKEMYTFEDRNGDSLTLRPEGTAGCV 86 (322)
T ss_dssp HHHHHHHHHHH-----TTT---CEECBC--CSEEEHHHHHHHHCTTSHHH----HHTCEEEECTTSCEEEECSCSHHHHH
T ss_pred HHHHHHHHHHH-----HCC---CeEeEC--cccccHHHhhcccCcchhhh----HHHHhhhhhcccccccccccccchhh
Confidence 35556666664 346 888764 6664444443211 111111 112221 245789999888888
Q ss_pred HHHHcC------CCeEEEecccccCCCcCCCCCCcceeeeEEEEe
Q psy7414 149 ELIRMG------LDNFVVFGDVYRRDQIDSTHFPVFHQADGVHLL 187 (320)
Q Consensus 149 ~~l~~~------~~~~l~~GdVYRRDeID~tHyPvFHQmEG~~v~ 187 (320)
+...+. +-++..+|+|||.+..-...+-+|.|+ |+-+.
T Consensus 87 R~~~~~~~~~~~p~r~~y~g~v~r~~~~~~gr~re~~Q~-g~Eii 130 (322)
T d1kmma2 87 RAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYRQFHQL-GCEVF 130 (322)
T ss_dssp HHHHHTTCSTTCCEEEEEEEEEECCCCCBTTBCSEEEEE-EEEEE
T ss_pred HHHHhhhhhhhhhhhHhhcccccccCCCCCCccchhhhh-hHHHh
Confidence 877532 237899999999999888889999998 45554
No 22
>d1nyra4 d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (ThrRS) {Staphylococcus aureus [TaxId: 1280]}
Probab=31.11 E-value=66 Score=27.37 Aligned_cols=104 Identities=11% Similarity=0.152 Sum_probs=60.6
Q ss_pred ChHHH-HHHHHHHHHhhcccCCCCCCceEEecCCCCeecc--------eeccccCCCCCCCCCCCCCccccccccccccc
Q psy7414 71 HPLCM-LKQRIINFFYSEFVGKKGTPIFSIYDSISPVVTV--------EENFDSLLVAKDHVSRSKNDCYYVNREYLLRA 141 (320)
Q Consensus 71 HPl~i-l~~~I~~~F~~~~~~~~g~p~F~~~~~~~pVVs~--------~~NFD~L~~P~DHPsR~~~DTyYin~~~lLRT 141 (320)
+|.+. +.+.|++++.+.+. +.| |+.+.. |-++.. +.+|..=.++..+ .+- +++++||+
T Consensus 26 ~p~G~~l~~~L~~~~~~~~~-~~G---~~eV~~-P~l~~~~l~~~sG~~~~~~~~~~~~~~--~~~------~~~~~L~p 92 (291)
T d1nyra4 26 LPNGATIRREIERYIVDKEV-SMG---YDHVYT-PVLANVDLYKTSGHWDHYQEDMFPPMQ--LDE------TESMVLRP 92 (291)
T ss_dssp CHHHHHHHHHHHHHHHHHHH-HTT---EEECBC-CSEEETHHHHHHTHHHHCTTSSCCCEE--ETT------TEEEEECS
T ss_pred ehhHHHHHHHHHHHHHHHHH-HcC---CEEEEC-ccccchhHhhhhccccccccceEEEee--ccc------cccccccc
Confidence 56554 77788888876543 346 887754 333321 1334333332211 000 23467787
Q ss_pred cCchhhHHHHHcC-------CCeEEEecccccCCCcCCCC----CCcceeeeEEEEe
Q psy7414 142 HTTAHQSELIRMG-------LDNFVVFGDVYRRDQIDSTH----FPVFHQADGVHLL 187 (320)
Q Consensus 142 HTSAhq~~~l~~~-------~~~~l~~GdVYRRDeID~tH----yPvFHQmEG~~v~ 187 (320)
..=.....++++. +-++.-.+.|||++.=-+++ ...|+|.|+...-
T Consensus 93 t~e~~~~~~~~~~~~sy~dLPlr~~~~~~~fR~E~~~~~~Gl~Rvr~F~~~d~~~f~ 149 (291)
T d1nyra4 93 MNCPHHMMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFV 149 (291)
T ss_dssp SSHHHHHHHHHTSCCBGGGCCEEEEEEEEEECCCCTTTCBTTTBCSEEEEEEEEEEE
T ss_pred cchhHHHHhhhcEeccccccceEEeeccceeecCCCcccccccceeeeeeeeheeec
Confidence 7666666776543 23888899999999733333 3468888887774
No 23
>d1n0ua4 d.58.11.1 (A:482-560) Elongation factor 2 (eEF-2) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=21.39 E-value=14 Score=25.95 Aligned_cols=27 Identities=19% Similarity=0.262 Sum_probs=20.0
Q ss_pred CCceEEEeeeCCceEEEeeccccccccc
Q psy7414 291 HPSWELEILLNDKWVEILGCGVIRHEIL 318 (320)
Q Consensus 291 ePS~EleV~~~g~WLEvLGCGvv~~~vL 318 (320)
.||++++.--.|+|+ +.|+|-+|=+++
T Consensus 34 Dpsl~v~~~etge~i-l~G~GelHLev~ 60 (79)
T d1n0ua4 34 DPCVLTYMSESGEHI-VAGTGELHLEIC 60 (79)
T ss_dssp CTTCEEEECTTSCEE-EEESSHHHHHHH
T ss_pred CCcEEEEEcCCCCcE-EecCCHHHHHHH
Confidence 577777665458887 899998886653
No 24
>d1ysja2 d.58.19.1 (A:178-292) Protein YxeP {Bacillus subtilis [TaxId: 1423]}
Probab=20.26 E-value=40 Score=24.24 Aligned_cols=35 Identities=11% Similarity=0.374 Sum_probs=26.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhCCCccEEEeccC
Q psy7414 251 TLDATKVMEQKLKNSLVKLAKILFGDDIQMRWISEY 286 (320)
Q Consensus 251 ~~~~~~~v~~~LK~tLe~lv~~lFg~~~~~Rw~~ay 286 (320)
+.+..+.+...|+..++.+... +|-.+++.|.+.|
T Consensus 80 ~~~~~~~i~~~i~~~~~~~a~~-~g~~~ei~~~~~~ 114 (115)
T d1ysja2 80 QKEARQAVPEHMRRVAEGIAAG-YGAQAEFKWFPYL 114 (115)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH-TTCEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-hCCEEEEEEEcCC
Confidence 4566778888999999988865 5767788886544
Done!