BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7416
(381 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O46106|NOI_DROME Splicing factor 3A subunit 3 OS=Drosophila melanogaster GN=noi PE=1
SV=1
Length = 503
Score = 400 bits (1029), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/271 (74%), Positives = 221/271 (81%), Gaps = 17/271 (6%)
Query: 97 KEAGSVLTHVGAHLDLSAFSSWEELASLGLDRLK------------TLEERAQRLFSTKG 144
KE S L + GAHLDLSAFSSWEELASLGLDRLK TLEERAQRLFSTKG
Sbjct: 231 KETESALANTGAHLDLSAFSSWEELASLGLDRLKSALVALGLKCGGTLEERAQRLFSTKG 290
Query: 145 KTALDPSLLAK--SKPDKGLKSKQQERQKEIAGLEAQIYKLAEQVSEQRSATKDNVQRKQ 202
K+ LDP+L+AK S +S++ ER KEIA LEA +YK A+ +SEQR+ATK+NVQRKQ
Sbjct: 291 KSTLDPALMAKKPSAKTASAQSREHERHKEIAQLEALLYKYADLLSEQRAATKENVQRKQ 350
Query: 203 ARGEGERGDS--EESEAGDTSDEDDE-VPYNPKNLPLGWDGKPIPYWLYKLHGLNISYTC 259
AR GER DS E SE+ + D D + VPYNPKNLPLGWDGKPIPYWLYKLHGLNISY C
Sbjct: 351 ARTGGERDDSDVEASESDNEDDPDADDVPYNPKNLPLGWDGKPIPYWLYKLHGLNISYNC 410
Query: 260 EICGNFVYKGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDALALWEKLKAQKQE 319
EICGNF YKGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDA+ LWEKLK+QKQ
Sbjct: 411 EICGNFTYKGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAITLWEKLKSQKQS 470
Query: 320 ERWQPEQEEEFEDSLGNVVNRKTYEDLKRQG 350
ERW +QEEEFEDSLGNVVNRKT+EDLKRQG
Sbjct: 471 ERWVADQEEEFEDSLGNVVNRKTFEDLKRQG 501
Score = 101 bits (252), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 67/85 (78%), Gaps = 2/85 (2%)
Query: 1 TLEERAQRLFSTKGKTALDPSLLAK--SKPDKGLKSKQQERQKEIAGLEAQIYKLAEQVS 58
TLEERAQRLFSTKGK+ LDP+L+AK S +S++ ER KEIA LEA +YK A+ +S
Sbjct: 277 TLEERAQRLFSTKGKSTLDPALMAKKPSAKTASAQSREHERHKEIAQLEALLYKYADLLS 336
Query: 59 EQRSATKDNVQRKQARGEGERGDSE 83
EQR+ATK+NVQRKQAR GER DS+
Sbjct: 337 EQRAATKENVQRKQARTGGERDDSD 361
>sp|Q9D554|SF3A3_MOUSE Splicing factor 3A subunit 3 OS=Mus musculus GN=Sf3a3 PE=2 SV=2
Length = 501
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/270 (70%), Positives = 213/270 (78%), Gaps = 17/270 (6%)
Query: 97 KEAGSVLTHVGAHLDLSAFSSWEELASLGLDRLK------------TLEERAQRLFSTKG 144
KE S LTH GAHLDLSAFSSWEELASLGLDRLK TLEERAQRLFSTKG
Sbjct: 231 KETSSALTHAGAHLDLSAFSSWEELASLGLDRLKSALLALGLKCGGTLEERAQRLFSTKG 290
Query: 145 KT--ALDPSLLAKSKPDKGLKSKQQERQKEIAGLEAQIYKLAEQVSEQRSATKDNVQRKQ 202
K+ +LD SL AK+ KG K + ER K+IA LEAQIY+ E + EQR T +NVQRKQ
Sbjct: 291 KSLESLDTSLFAKNPKSKGTK-RDTERNKDIAFLEAQIYEYVEILGEQRQLTHENVQRKQ 349
Query: 203 ARG--EGERGDSEESEAGDTSDEDDEVPYNPKNLPLGWDGKPIPYWLYKLHGLNISYTCE 260
AR E E + E+ ++ DE++E+ YNPKNLPLGWDGKPIPYWLYKLHGLNI+Y CE
Sbjct: 350 ARTGEEREEEEEEQISESESEDEENEIIYNPKNLPLGWDGKPIPYWLYKLHGLNINYNCE 409
Query: 261 ICGNFVYKGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDALALWEKLKAQKQEE 320
ICGN+ Y+GPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDA++LW KLK QK E
Sbjct: 410 ICGNYTYRGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWAKLKLQKASE 469
Query: 321 RWQPEQEEEFEDSLGNVVNRKTYEDLKRQG 350
RWQP+ EEE+EDS GNVVN+KTYEDLKRQG
Sbjct: 470 RWQPDTEEEYEDSSGNVVNKKTYEDLKRQG 499
Score = 82.4 bits (202), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/76 (63%), Positives = 56/76 (73%), Gaps = 3/76 (3%)
Query: 1 TLEERAQRLFSTKGKT--ALDPSLLAKSKPDKGLKSKQQERQKEIAGLEAQIYKLAEQVS 58
TLEERAQRLFSTKGK+ +LD SL AK+ KG K + ER K+IA LEAQIY+ E +
Sbjct: 277 TLEERAQRLFSTKGKSLESLDTSLFAKNPKSKGTK-RDTERNKDIAFLEAQIYEYVEILG 335
Query: 59 EQRSATKDNVQRKQAR 74
EQR T +NVQRKQAR
Sbjct: 336 EQRQLTHENVQRKQAR 351
>sp|Q12874|SF3A3_HUMAN Splicing factor 3A subunit 3 OS=Homo sapiens GN=SF3A3 PE=1 SV=1
Length = 501
Score = 367 bits (941), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/270 (70%), Positives = 213/270 (78%), Gaps = 17/270 (6%)
Query: 97 KEAGSVLTHVGAHLDLSAFSSWEELASLGLDRLK------------TLEERAQRLFSTKG 144
KE S LTH GAHLDLSAFSSWEELASLGLDRLK TLEERAQRLFSTKG
Sbjct: 231 KETSSALTHAGAHLDLSAFSSWEELASLGLDRLKSALLALGLKCGGTLEERAQRLFSTKG 290
Query: 145 KT--ALDPSLLAKSKPDKGLKSKQQERQKEIAGLEAQIYKLAEQVSEQRSATKDNVQRKQ 202
K+ +LD SL AK+ KG K + ER K+IA LEAQIY+ E + EQR T +NVQRKQ
Sbjct: 291 KSLESLDTSLFAKNPKSKGTK-RDTERNKDIAFLEAQIYEYVEILGEQRHLTHENVQRKQ 349
Query: 203 ARG--EGERGDSEESEAGDTSDEDDEVPYNPKNLPLGWDGKPIPYWLYKLHGLNISYTCE 260
AR E E + E+ ++ DE++E+ YNPKNLPLGWDGKPIPYWLYKLHGLNI+Y CE
Sbjct: 350 ARTGEEREEEEEEQISESESEDEENEIIYNPKNLPLGWDGKPIPYWLYKLHGLNINYNCE 409
Query: 261 ICGNFVYKGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDALALWEKLKAQKQEE 320
ICGN+ Y+GPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDA++LW KLK QK E
Sbjct: 410 ICGNYTYRGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWAKLKLQKASE 469
Query: 321 RWQPEQEEEFEDSLGNVVNRKTYEDLKRQG 350
RWQP+ EEE+EDS GNVVN+KTYEDLKRQG
Sbjct: 470 RWQPDTEEEYEDSSGNVVNKKTYEDLKRQG 499
Score = 82.4 bits (202), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/76 (63%), Positives = 56/76 (73%), Gaps = 3/76 (3%)
Query: 1 TLEERAQRLFSTKGKT--ALDPSLLAKSKPDKGLKSKQQERQKEIAGLEAQIYKLAEQVS 58
TLEERAQRLFSTKGK+ +LD SL AK+ KG K + ER K+IA LEAQIY+ E +
Sbjct: 277 TLEERAQRLFSTKGKSLESLDTSLFAKNPKSKGTK-RDTERNKDIAFLEAQIYEYVEILG 335
Query: 59 EQRSATKDNVQRKQAR 74
EQR T +NVQRKQAR
Sbjct: 336 EQRHLTHENVQRKQAR 351
>sp|O59706|SAP61_SCHPO Pre-mRNA-splicing factor sap61 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=sap61 PE=1 SV=1
Length = 492
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 115/203 (56%), Gaps = 18/203 (8%)
Query: 166 QQERQKEIAGLEAQIYKLAEQVSEQRSATKDNVQRKQARGEGER---------------- 209
+Q+ K IA +E I KL + + R T++NV R+Q ER
Sbjct: 288 KQKGPKAIARIEFLIKKLTSLLDDVRKDTRENVVRRQTLTAAERLAEVEAAEREAFEQST 347
Query: 210 --GDSEESEAGDTSDEDDEVPYNPKNLPLGWDGKPIPYWLYKLHGLNISYTCEICGNFVY 267
E ++ ++ +D+E YNP LPLGWDGKPIP+WL+KLHGL + CEICGN+VY
Sbjct: 348 PSVSVEGNQDEESDQDDEEKIYNPLKLPLGWDGKPIPFWLWKLHGLGKEFPCEICGNYVY 407
Query: 268 KGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDALALWEKLKAQKQEERWQPEQE 327
G KAF +HF E RH +G++CLGI + F +T I++AL LW+K K ++
Sbjct: 408 MGRKAFDKHFTEQRHIYGLKCLGISPSPLFNQITSIDEALQLWQKYKVDSKKRETTMASL 467
Query: 328 EEFEDSLGNVVNRKTYEDLKRQG 350
E ED GNV++ K Y DLK QG
Sbjct: 468 NEMEDDEGNVMSEKVYNDLKAQG 490
>sp|P19736|PRP9_YEAST Pre-mRNA-splicing factor PRP9 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PRP9 PE=1 SV=1
Length = 530
Score = 122 bits (307), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 120/226 (53%), Gaps = 37/226 (16%)
Query: 162 LKSKQQERQKEIAGLEAQIYKLAEQVSEQRSATKDNVQRKQARGEGERG----------- 210
+ K + +++ E ++++ + ++++ S T+ V+RK A ER
Sbjct: 303 IHKKNESKRRNFVYSEYKLHRYLKYLNDEFSRTRSFVERKLAFTANERMAEMDILTQKYE 362
Query: 211 ----DSEESEAGDTSD--------EDDEVPYNPKNLPLGWDGKPIPYWLYKLHGLNISYT 258
DS E E + D +++ + ++PLG DG P+PYWLYKLHGL+ Y
Sbjct: 363 APAYDSTEKEGAEQVDGEQRDGQLQEEHLSGKSFDMPLGPDGLPMPYWLYKLHGLDREYR 422
Query: 259 CEICGNFVYKGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDALALWEKLKAQKQ 318
CEIC N VY G + F+RHF E RH + +RCLGI ++ F +T+I++A LW+ ++ Q Q
Sbjct: 423 CEICSNKVYNGRRTFERHFNEERHIYHLRCLGIEPSSVFKGITKIKEAQELWKNMQGQSQ 482
Query: 319 -------EERWQPEQ-------EEEFEDSLGNVVNRKTYEDLKRQG 350
+ P Q E E ED GNV+++K Y++LK+QG
Sbjct: 483 LTSIAAVPPKPNPSQLKVPTELELEEEDEEGNVMSKKVYDELKKQG 528
>sp|Q7T293|SDE2_DANRE Protein SDE2 homolog OS=Danio rerio GN=sde2 PE=2 SV=2
Length = 467
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 67/129 (51%), Gaps = 26/129 (20%)
Query: 49 QIYKLAEQVSEQRSATKDNVQRKQARGEGERGDSEESEAGDTSDEDDEKEAGSVLTHVGA 108
Q + E+++E+ T + VQ+K +EES A + +E VL+ V
Sbjct: 350 QTAERVEKMAEEVQKTAEEVQKK----------TEESTAEISPSSSIPEEKSQVLSQVED 399
Query: 109 HLDLSAFSSWEELASLGLDRLK------------TLEERAQRLFSTKGKTA--LDPSLLA 154
LDL + S E+L +LGL+RLK TL+ERA RLFS KG T +DPSLLA
Sbjct: 400 PLDLLSVSGPEQLEALGLERLKKELMERGMKCGGTLQERAARLFSVKGLTPDQIDPSLLA 459
Query: 155 KSKPDKGLK 163
KP KG K
Sbjct: 460 --KPSKGKK 466
Score = 39.3 bits (90), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 25/35 (71%), Gaps = 4/35 (11%)
Query: 1 TLEERAQRLFSTKGKTA--LDPSLLAKSKPDKGLK 33
TL+ERA RLFS KG T +DPSLLA KP KG K
Sbjct: 434 TLQERAARLFSVKGLTPDQIDPSLLA--KPSKGKK 466
>sp|Q8K1J5|SDE2_MOUSE Protein SDE2 homolog OS=Mus musculus GN=Sde2 PE=1 SV=1
Length = 448
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 42/68 (61%), Gaps = 16/68 (23%)
Query: 110 LDLSAFSSWEELASLGLDRLK------------TLEERAQRLFSTKGKT--ALDPSLLAK 155
+DLSAFSS EL SLGL+RLK TL+ERA RLFS +G T +DP+L A
Sbjct: 382 VDLSAFSSAAELESLGLERLKCELMVLGLKCGGTLQERAARLFSVRGLTKELIDPALFA- 440
Query: 156 SKPDKGLK 163
KP KG K
Sbjct: 441 -KPSKGKK 447
Score = 35.4 bits (80), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 24/35 (68%), Gaps = 4/35 (11%)
Query: 1 TLEERAQRLFSTKGKT--ALDPSLLAKSKPDKGLK 33
TL+ERA RLFS +G T +DP+L A KP KG K
Sbjct: 415 TLQERAARLFSVRGLTKELIDPALFA--KPSKGKK 447
>sp|Q6IQ49|SDE2_HUMAN Protein SDE2 homolog OS=Homo sapiens GN=SDE2 PE=1 SV=1
Length = 451
Score = 41.6 bits (96), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 37/68 (54%), Gaps = 16/68 (23%)
Query: 110 LDLSAFSSWE------------ELASLGLDRLKTLEERAQRLFSTKG--KTALDPSLLAK 155
+DL AF+S EL +LGL TL+ERA RLFS +G K +DP+L A
Sbjct: 385 IDLLAFTSVAELELLGLEKLKCELMALGLKCGGTLQERAARLFSVRGLAKEQIDPALFA- 443
Query: 156 SKPDKGLK 163
KP KG K
Sbjct: 444 -KPLKGKK 450
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 24/35 (68%), Gaps = 4/35 (11%)
Query: 1 TLEERAQRLFSTKG--KTALDPSLLAKSKPDKGLK 33
TL+ERA RLFS +G K +DP+L A KP KG K
Sbjct: 418 TLQERAARLFSVRGLAKEQIDPALFA--KPLKGKK 450
>sp|Q5RET9|SDE2_PONAB Protein SDE2 homolog OS=Pongo abelii GN=SDE2 PE=2 SV=1
Length = 451
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 37/68 (54%), Gaps = 16/68 (23%)
Query: 110 LDLSAFSSWE------------ELASLGLDRLKTLEERAQRLFSTKG--KTALDPSLLAK 155
+DL AF+S EL +LGL TL+ERA RLFS +G K +DP+L A
Sbjct: 385 IDLLAFTSVAELELLGLEKLKCELMALGLKCGGTLQERAARLFSVRGLAKEQIDPALFA- 443
Query: 156 SKPDKGLK 163
KP KG K
Sbjct: 444 -KPLKGKK 450
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 24/35 (68%), Gaps = 4/35 (11%)
Query: 1 TLEERAQRLFSTKG--KTALDPSLLAKSKPDKGLK 33
TL+ERA RLFS +G K +DP+L A KP KG K
Sbjct: 418 TLQERAARLFSVRGLAKEQIDPALFA--KPLKGKK 450
>sp|Q5BJN8|SDE2_RAT Protein SDE2 homolog OS=Rattus norvegicus GN=Sde2 PE=2 SV=2
Length = 448
Score = 37.7 bits (86), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 48/109 (44%), Gaps = 25/109 (22%)
Query: 78 ERGDSEESEAGDTSDEDDEKEAGSVL--------THVGAH-LDLSAFSSWEE-------- 120
E G E A +D K + T +G LDLSAFS E
Sbjct: 341 ETGVIGEDRAAMALSGEDRKSIPAATPEGSNSGDTALGVEALDLSAFSCAAELELLGLER 400
Query: 121 ----LASLGLDRLKTLEERAQRLFSTKG--KTALDPSLLAKSKPDKGLK 163
L +LGL TL+ERA RLFS +G K +DP+L A KP KG K
Sbjct: 401 LKCALMALGLKCGGTLQERAARLFSVRGLSKELIDPTLFA--KPSKGKK 447
Score = 35.0 bits (79), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 24/35 (68%), Gaps = 4/35 (11%)
Query: 1 TLEERAQRLFSTKG--KTALDPSLLAKSKPDKGLK 33
TL+ERA RLFS +G K +DP+L A KP KG K
Sbjct: 415 TLQERAARLFSVRGLSKELIDPTLFA--KPSKGKK 447
>sp|Q07G43|SDE2_XENTR Protein SDE2 homolog OS=Xenopus tropicalis GN=sde2 PE=2 SV=1
Length = 468
Score = 37.0 bits (84), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 35/68 (51%), Gaps = 16/68 (23%)
Query: 110 LDLSAFSSWEEL------------ASLGLDRLKTLEERAQRLFSTKG--KTALDPSLLAK 155
+DL AF + EL +L L TL+ERA RLFS +G + +DPSL A
Sbjct: 402 IDLLAFKTAAELEALGLEKLKLELGALALKCGGTLQERAARLFSVRGLPRDQIDPSLFA- 460
Query: 156 SKPDKGLK 163
KP KG K
Sbjct: 461 -KPAKGKK 467
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 24/35 (68%), Gaps = 4/35 (11%)
Query: 1 TLEERAQRLFSTKG--KTALDPSLLAKSKPDKGLK 33
TL+ERA RLFS +G + +DPSL A KP KG K
Sbjct: 435 TLQERAARLFSVRGLPRDQIDPSLFA--KPAKGKK 467
>sp|Q6NRI5|SDE2_XENLA Protein SDE2 homolog OS=Xenopus laevis GN=sde2 PE=2 SV=1
Length = 454
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 14/58 (24%)
Query: 110 LDLSAFSSWEEL------------ASLGLDRLKTLEERAQRLFSTKG--KTALDPSLL 153
+DL A+ + EL +LGL TL+ERA RLFS +G + +DPSL
Sbjct: 388 IDLVAYKTVAELEALGLEKLKLELVALGLKCGGTLQERAARLFSVRGLARDQIDPSLF 445
>sp|P16258|OSBP1_RABIT Oxysterol-binding protein 1 OS=Oryctolagus cuniculus GN=OSBP PE=1
SV=1
Length = 809
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 92/207 (44%), Gaps = 34/207 (16%)
Query: 48 AQIYKL--AEQVSEQRSATKDNVQRKQARGEGERGDSEESEAGDTSDEDDEKEAGSVLTH 105
AQ Y L + +V QR T ++ +A+ +S+ES ++ + D+ E + L
Sbjct: 158 AQTYHLKASSEVERQRWVTA--LELAKAKAVKMLAESDESGDEESVSQTDKTELQNTLRT 215
Query: 106 VGAHL-DLSAFS------------SWEELASLGL-----DRLKTLEERAQRLFSTKGKTA 147
+ + + DLS + S EL SL L +++K + ERA LF
Sbjct: 216 LSSKVEDLSTCNDLIAKHGTALQRSLSELESLKLPAESNEKIKQVNERAT-LFRITSNAM 274
Query: 148 LDPS----LLAKSKPDKGLKSKQQERQKEIAGLEAQIYKLAEQVSEQ----RSATKDNVQ 199
++ +LA++ K KS Q ER + I LE + +LA+Q + R AT
Sbjct: 275 INACRDFLVLAQTHSKKWQKSLQYERDQRIR-LEETLEQLAKQHNHLERAFRGATVLPAH 333
Query: 200 RKQARGEGERGDSEESEAGDTSDEDDE 226
+ G G+ D S GD SDEDDE
Sbjct: 334 TSGSAGSGK--DQCCSGKGDMSDEDDE 358
>sp|Q3B7Z2|OSBP1_MOUSE Oxysterol-binding protein 1 OS=Mus musculus GN=Osbp PE=1 SV=3
Length = 805
Score = 32.7 bits (73), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 92/207 (44%), Gaps = 34/207 (16%)
Query: 48 AQIYKL--AEQVSEQRSATKDNVQRKQARGEGERGDSEESEAGDTSDEDDEKEAGSVLTH 105
AQ Y L + +V QR T ++ +A+ +S++S ++ + D+ E S L
Sbjct: 154 AQTYHLKASSEVERQRWVTA--LELAKAKAVKMLAESDDSGDEESVSQTDKTELQSTLRT 211
Query: 106 VGAHL-DLSAFS------------SWEELASLGL-----DRLKTLEERAQRLFSTKGKTA 147
+ + + DLS + S EL SL L +++K + ERA LF
Sbjct: 212 LSSKVEDLSTCNDLIAKHGTALQRSLSELESLKLPAESNEKIKQVNERAT-LFRITSNAM 270
Query: 148 LDPS----LLAKSKPDKGLKSKQQERQKEIAGLEAQIYKLAEQVSEQ----RSATKDNVQ 199
++ +LA++ K KS Q ER + I LE + +LA+Q + R AT
Sbjct: 271 INACRDFLMLAQTHSKKWQKSLQYERDQRIR-LEETLEQLAKQHNHLERAFRGATVLPAN 329
Query: 200 RKQARGEGERGDSEESEAGDTSDEDDE 226
+ G G+ D S GD SDEDDE
Sbjct: 330 PPGSAGSGK--DQCCSGKGDMSDEDDE 354
>sp|P22059|OSBP1_HUMAN Oxysterol-binding protein 1 OS=Homo sapiens GN=OSBP PE=1 SV=1
Length = 807
Score = 32.7 bits (73), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 91/205 (44%), Gaps = 30/205 (14%)
Query: 48 AQIYKL--AEQVSEQRSATKDNVQRKQARGEGERGDSEESEAGDTSDEDDEKEAGSVLTH 105
AQ Y L + +V QR T ++ +A+ +S+ES ++ + D+ E + L
Sbjct: 156 AQTYHLKASSEVERQRWVTA--LELAKAKAVKMLAESDESGDEESVSQTDKTELQNTLRT 213
Query: 106 VGAHL-DLSAFS------------SWEELASLGL-----DRLKTLEERAQRLFSTKGKTA 147
+ + + DLS + S EL SL L +++K + ERA LF
Sbjct: 214 LSSKVEDLSTCNDLIAKHGTALQRSLSELESLKLPAESNEKIKQVNERAT-LFRITSNAM 272
Query: 148 LDPS----LLAKSKPDKGLKSKQQERQKEIAGLEAQIYKLAEQVSE-QRSATKDNVQRKQ 202
++ +LA++ K KS Q ER + I LE + +LA+Q + +R+ V
Sbjct: 273 INACRDFLMLAQTHSKKWQKSLQYERDQRIR-LEETLEQLAKQHNHLERAFRGATVLPAN 331
Query: 203 ARGE-GERGDSEESEAGDTSDEDDE 226
G G D S GD SDEDDE
Sbjct: 332 TPGNVGSGKDQCCSGKGDMSDEDDE 356
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.308 0.128 0.362
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 147,194,707
Number of Sequences: 539616
Number of extensions: 6559107
Number of successful extensions: 39137
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 764
Number of HSP's that attempted gapping in prelim test: 35319
Number of HSP's gapped (non-prelim): 3947
length of query: 381
length of database: 191,569,459
effective HSP length: 119
effective length of query: 262
effective length of database: 127,355,155
effective search space: 33367050610
effective search space used: 33367050610
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 62 (28.5 bits)