Your job contains 1 sequence.
>psy7416
TLEERAQRLFSTKGKTALDPSLLAKSKPDKGLKSKQQERQKEIAGLEAQIYKLAEQVSEQ
RSATKDNVQRKQARGEGERGDSEESEAGDTSDEDDEKEAGSVLTHVGAHLDLSAFSSWEE
LASLGLDRLKTLEERAQRLFSTKGKTALDPSLLAKSKPDKGLKSKQQERQKEIAGLEAQI
YKLAEQVSEQRSATKDNVQRKQARGEGERGDSEESEAGDTSDEDDEVPYNPKNLPLGWDG
KPIPYWLYKLHGLNISYTCEICGNFVYKGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANV
TQIEDALALWEKLKAQKQEERWQPEQEEEFEDSLGNVVNRKTYEDLKRQGWQPEQEEEFE
DSLGNVVNRKTYEDLKRQGLL
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy7416
(381 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q5F387 - symbol:SF3A3 "Uncharacterized protein"... 869 6.0e-87 1
ZFIN|ZDB-GENE-040908-1 - symbol:sf3a3 "splicing factor 3a... 865 1.6e-86 1
MGI|MGI:1922312 - symbol:Sf3a3 "splicing factor 3a, subun... 858 8.9e-86 1
UNIPROTKB|Q4KLI7 - symbol:Sf3a3 "Protein Sf3a3" species:1... 858 8.9e-86 1
UNIPROTKB|E2QXU5 - symbol:SF3A3 "Uncharacterized protein"... 857 1.1e-85 1
UNIPROTKB|E7EUT8 - symbol:SF3A3 "Splicing factor 3A subun... 857 1.1e-85 1
UNIPROTKB|Q12874 - symbol:SF3A3 "Splicing factor 3A subun... 857 1.1e-85 1
UNIPROTKB|F1SV40 - symbol:SF3A3 "Uncharacterized protein"... 857 1.1e-85 1
UNIPROTKB|Q3SWY7 - symbol:SF3A3 "Splicing factor 3a, subu... 856 1.4e-85 1
FB|FBgn0014366 - symbol:noi "noisette" species:7227 "Dros... 804 4.7e-80 1
WB|WBGene00011758 - symbol:T13H5.4 species:6239 "Caenorha... 663 4.1e-65 1
UNIPROTKB|Q22469 - symbol:T13H5.4 "Protein T13H5.4" speci... 663 4.1e-65 1
TAIR|locus:2152855 - symbol:ATO "ATROPOS" species:3702 "A... 500 7.7e-52 2
UNIPROTKB|G4N2Q7 - symbol:MGG_12972 "Splicing factor 3a s... 367 3.6e-40 2
POMBASE|SPBC36.09 - symbol:sap61 "U2 snRNP-associated pro... 379 9.4e-40 2
ASPGD|ASPL0000009101 - symbol:AN8015 species:162425 "Emer... 392 2.1e-36 1
DICTYBASE|DDB_G0270020 - symbol:sf3a3 "splicing factor 3A... 344 6.0e-31 1
SGD|S000002188 - symbol:PRP9 "Subunit of the SF3a splicin... 291 2.5e-27 2
CGD|CAL0002401 - symbol:orf19.3178 species:5476 "Candida ... 302 2.3e-26 1
ZFIN|ZDB-GENE-050417-270 - symbol:zgc:112095 "zgc:112095"... 133 8.2e-06 1
MGI|MGI:2384788 - symbol:Sde2 "SDE2 telomere maintenance ... 122 0.00012 1
>UNIPROTKB|Q5F387 [details] [associations]
symbol:SF3A3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] InterPro:IPR000690 InterPro:IPR015880
PROSITE:PS50171 SMART:SM00355 GO:GO:0008270 GO:GO:0006397
GO:GO:0003676 GO:GO:0071013 eggNOG:COG5188
GeneTree:ENSGT00530000063402 KO:K12827 InterPro:IPR024598
InterPro:IPR021966 Pfam:PF11931 Pfam:PF12108 HOGENOM:HOG000160935
CTD:10946 HOVERGEN:HBG054452 OMA:YITYLST OrthoDB:EOG42FSHC
EMBL:AADN02043911 EMBL:AJ851763 IPI:IPI00601517
RefSeq:XP_001232935.1 UniGene:Gga.2763 SMR:Q5F387 STRING:Q5F387
Ensembl:ENSGALT00000002340 GeneID:419608 KEGG:gga:419608
InParanoid:Q5F387 NextBio:20822639 Uniprot:Q5F387
Length = 501
Score = 869 (311.0 bits), Expect = 6.0e-87, P = 6.0e-87
Identities = 175/270 (64%), Positives = 194/270 (71%)
Query: 97 KEAGSVLTHVGAHLDLSAFSSWEELASLGLDRLK------------TLEERAQRLFSTKG 144
KE S LTH GAHLDLSAFSSWEELASLGLDRLK TLEERAQRLFSTKG
Sbjct: 231 KETSSALTHAGAHLDLSAFSSWEELASLGLDRLKSALLALGLKCGGTLEERAQRLFSTKG 290
Query: 145 KT--ALDPSLLAKSKPDKGLKSKQQERQKEIAGLEAQIYKLAEQVSEQRSATKDNVQRKQ 202
K+ ALDPSL AK+ KG+K + ER K++A LEAQIY+ E + EQR T +NVQRKQ
Sbjct: 291 KSLEALDPSLFAKNPKTKGIK-RDTERNKDLAFLEAQIYEYVEVLGEQRHLTHENVQRKQ 349
Query: 203 XXXXXXXXXXXXX--XXXXTSDEDDEVPYNPKNLPLGWDGKPIPYWLYKLHGLNISYTCE 260
+ DE++E+ YNPKNLPLGWDGKPIPYWLYKLHGLNI+Y CE
Sbjct: 350 ARTGEEREEEEEEQISESESEDEENEIIYNPKNLPLGWDGKPIPYWLYKLHGLNINYNCE 409
Query: 261 ICGNFVYKGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDALALWEKLKAXXXXX 320
ICGN+ Y+GPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDA++LW KLK
Sbjct: 410 ICGNYTYRGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWAKLKLQKASE 469
Query: 321 XXXXXXXXXXXDSLGNVVNRKTYEDLKRQG 350
DS GNVVN+KTYEDLKRQG
Sbjct: 470 RWQPDTEEEYEDSSGNVVNKKTYEDLKRQG 499
Score = 221 (82.9 bits), Expect = 2.1e-27, Sum P(2) = 2.1e-27
Identities = 51/100 (51%), Positives = 62/100 (62%)
Query: 1 TLEERAQRLFSTKGKT--ALDPSLLAKSKPDKGLKSKQQERQKEIAGLEAQIYKLAEQVS 58
TLEERAQRLFSTKGK+ ALDPSL AK+ KG+K + ER K++A LEAQIY+ E +
Sbjct: 277 TLEERAQRLFSTKGKSLEALDPSLFAKNPKTKGIK-RDTERNKDLAFLEAQIYEYVEVLG 335
Query: 59 EQRSATKDNVQRKQXXXXXXXXXXXXXXXXXTSDEDDEKE 98
EQR T +NVQRKQ + ED+E E
Sbjct: 336 EQRHLTHENVQRKQARTGEEREEEEEEQISESESEDEENE 375
Score = 144 (55.7 bits), Expect = 2.1e-27, Sum P(2) = 2.1e-27
Identities = 26/31 (83%), Positives = 29/31 (93%)
Query: 351 WQPEQEEEFEDSLGNVVNRKTYEDLKRQGLL 381
WQP+ EEE+EDS GNVVN+KTYEDLKRQGLL
Sbjct: 471 WQPDTEEEYEDSSGNVVNKKTYEDLKRQGLL 501
>ZFIN|ZDB-GENE-040908-1 [details] [associations]
symbol:sf3a3 "splicing factor 3a, subunit 3"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0060218 "hematopoietic stem cell differentiation"
evidence=IMP] InterPro:IPR000690 InterPro:IPR015880 PROSITE:PS50171
SMART:SM00355 ZFIN:ZDB-GENE-040908-1 GO:GO:0005634 GO:GO:0008270
GO:GO:0003676 GO:GO:0060218 KO:K12827 InterPro:IPR024598
InterPro:IPR021966 Pfam:PF11931 Pfam:PF12108 CTD:10946
HOVERGEN:HBG054452 EMBL:AY648757 IPI:IPI00863550
RefSeq:NP_001004289.1 UniGene:Dr.79368 ProteinModelPortal:Q6DRK2
SMR:Q6DRK2 STRING:Q6DRK2 PRIDE:Q6DRK2 GeneID:446168 KEGG:dre:446168
InParanoid:Q6DRK2 NextBio:20832244 ArrayExpress:Q6DRK2 Bgee:Q6DRK2
Uniprot:Q6DRK2
Length = 501
Score = 865 (309.6 bits), Expect = 1.6e-86, P = 1.6e-86
Identities = 176/270 (65%), Positives = 193/270 (71%)
Query: 97 KEAGSVLTHVGAHLDLSAFSSWEELASLGLDRLK------------TLEERAQRLFSTKG 144
KE S LTH GAHLDLSAFSSWEELASLGLDRLK TLEERAQRLFSTKG
Sbjct: 231 KETSSALTHAGAHLDLSAFSSWEELASLGLDRLKSALMALGLKCGGTLEERAQRLFSTKG 290
Query: 145 KT--ALDPSLLAKSKPDKGLKSKQQERQKEIAGLEAQIYKLAEQVSEQRSATKDNVQRKQ 202
K+ +LDPSL AK+ KG K K ER KE A LEAQIY+ E + EQR + +NVQRKQ
Sbjct: 291 KSLESLDPSLFAKNPKAKGPK-KDSERNKESAFLEAQIYEYVEILGEQRQLSHENVQRKQ 349
Query: 203 XXXXXXXXXXXXX--XXXXTSDEDDEVPYNPKNLPLGWDGKPIPYWLYKLHGLNISYTCE 260
+ DED+E+ YNPKNLPLGWDGKPIPYWLYKLHGLNI+Y CE
Sbjct: 350 ARTGEERDEEDEEQPSESESEDEDNEIIYNPKNLPLGWDGKPIPYWLYKLHGLNINYNCE 409
Query: 261 ICGNFVYKGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDALALWEKLKAXXXXX 320
ICGN+ Y+GPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDA++LW KLK+
Sbjct: 410 ICGNYTYRGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWSKLKSQKALE 469
Query: 321 XXXXXXXXXXXDSLGNVVNRKTYEDLKRQG 350
DS GNVVN+KTYEDLKRQG
Sbjct: 470 RWQPDTEEEYEDSSGNVVNKKTYEDLKRQG 499
Score = 207 (77.9 bits), Expect = 9.3e-26, Sum P(2) = 9.3e-26
Identities = 50/100 (50%), Positives = 60/100 (60%)
Query: 1 TLEERAQRLFSTKGKT--ALDPSLLAKSKPDKGLKSKQQERQKEIAGLEAQIYKLAEQVS 58
TLEERAQRLFSTKGK+ +LDPSL AK+ KG K K ER KE A LEAQIY+ E +
Sbjct: 277 TLEERAQRLFSTKGKSLESLDPSLFAKNPKAKGPK-KDSERNKESAFLEAQIYEYVEILG 335
Query: 59 EQRSATKDNVQRKQXXXXXXXXXXXXXXXXXTSDEDDEKE 98
EQR + +NVQRKQ + ED++ E
Sbjct: 336 EQRQLSHENVQRKQARTGEERDEEDEEQPSESESEDEDNE 375
Score = 147 (56.8 bits), Expect = 9.3e-26, Sum P(2) = 9.3e-26
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 341 KTYEDLKRQGWQPEQEEEFEDSLGNVVNRKTYEDLKRQGLL 381
K+ + L+R WQP+ EEE+EDS GNVVN+KTYEDLKRQGLL
Sbjct: 463 KSQKALER--WQPDTEEEYEDSSGNVVNKKTYEDLKRQGLL 501
>MGI|MGI:1922312 [details] [associations]
symbol:Sf3a3 "splicing factor 3a, subunit 3" species:10090
"Mus musculus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR000690
InterPro:IPR015880 PROSITE:PS50171 SMART:SM00355 MGI:MGI:1922312
GO:GO:0008380 GO:GO:0046872 GO:GO:0008270 GO:GO:0006397
GO:GO:0003676 GO:GO:0071013 eggNOG:COG5188
GeneTree:ENSGT00530000063402 KO:K12827 InterPro:IPR024598
InterPro:IPR021966 Pfam:PF11931 Pfam:PF12108 HOGENOM:HOG000160935
CTD:10946 HOVERGEN:HBG054452 OMA:YITYLST OrthoDB:EOG42FSHC
ChiTaRS:SF3A3 EMBL:BC009141 EMBL:AK015776 IPI:IPI00137848
RefSeq:NP_083433.1 UniGene:Mm.25779 ProteinModelPortal:Q9D554
SMR:Q9D554 STRING:Q9D554 PhosphoSite:Q9D554 PaxDb:Q9D554
PRIDE:Q9D554 Ensembl:ENSMUST00000030734 GeneID:75062 KEGG:mmu:75062
InParanoid:Q9D554 NextBio:342126 Bgee:Q9D554 CleanEx:MM_SF3A3
Genevestigator:Q9D554 GermOnline:ENSMUSG00000028902 Uniprot:Q9D554
Length = 501
Score = 858 (307.1 bits), Expect = 8.9e-86, P = 8.9e-86
Identities = 174/270 (64%), Positives = 192/270 (71%)
Query: 97 KEAGSVLTHVGAHLDLSAFSSWEELASLGLDRLK------------TLEERAQRLFSTKG 144
KE S LTH GAHLDLSAFSSWEELASLGLDRLK TLEERAQRLFSTKG
Sbjct: 231 KETSSALTHAGAHLDLSAFSSWEELASLGLDRLKSALLALGLKCGGTLEERAQRLFSTKG 290
Query: 145 KT--ALDPSLLAKSKPDKGLKSKQQERQKEIAGLEAQIYKLAEQVSEQRSATKDNVQRKQ 202
K+ +LD SL AK+ KG K + ER K+IA LEAQIY+ E + EQR T +NVQRKQ
Sbjct: 291 KSLESLDTSLFAKNPKSKGTK-RDTERNKDIAFLEAQIYEYVEILGEQRQLTHENVQRKQ 349
Query: 203 XXXXXXXXXXXXX--XXXXTSDEDDEVPYNPKNLPLGWDGKPIPYWLYKLHGLNISYTCE 260
+ DE++E+ YNPKNLPLGWDGKPIPYWLYKLHGLNI+Y CE
Sbjct: 350 ARTGEEREEEEEEQISESESEDEENEIIYNPKNLPLGWDGKPIPYWLYKLHGLNINYNCE 409
Query: 261 ICGNFVYKGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDALALWEKLKAXXXXX 320
ICGN+ Y+GPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDA++LW KLK
Sbjct: 410 ICGNYTYRGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWAKLKLQKASE 469
Query: 321 XXXXXXXXXXXDSLGNVVNRKTYEDLKRQG 350
DS GNVVN+KTYEDLKRQG
Sbjct: 470 RWQPDTEEEYEDSSGNVVNKKTYEDLKRQG 499
Score = 210 (79.0 bits), Expect = 7.6e-26, Sum P(2) = 7.6e-26
Identities = 50/100 (50%), Positives = 60/100 (60%)
Query: 1 TLEERAQRLFSTKGKT--ALDPSLLAKSKPDKGLKSKQQERQKEIAGLEAQIYKLAEQVS 58
TLEERAQRLFSTKGK+ +LD SL AK+ KG K + ER K+IA LEAQIY+ E +
Sbjct: 277 TLEERAQRLFSTKGKSLESLDTSLFAKNPKSKGTK-RDTERNKDIAFLEAQIYEYVEILG 335
Query: 59 EQRSATKDNVQRKQXXXXXXXXXXXXXXXXXTSDEDDEKE 98
EQR T +NVQRKQ + ED+E E
Sbjct: 336 EQRQLTHENVQRKQARTGEEREEEEEEQISESESEDEENE 375
Score = 144 (55.7 bits), Expect = 7.6e-26, Sum P(2) = 7.6e-26
Identities = 26/31 (83%), Positives = 29/31 (93%)
Query: 351 WQPEQEEEFEDSLGNVVNRKTYEDLKRQGLL 381
WQP+ EEE+EDS GNVVN+KTYEDLKRQGLL
Sbjct: 471 WQPDTEEEYEDSSGNVVNKKTYEDLKRQGLL 501
>UNIPROTKB|Q4KLI7 [details] [associations]
symbol:Sf3a3 "Protein Sf3a3" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR000690 InterPro:IPR015880 PROSITE:PS50171
SMART:SM00355 RGD:1308726 GO:GO:0008270 GO:GO:0006397 GO:GO:0003676
GO:GO:0071013 eggNOG:COG5188 GeneTree:ENSGT00530000063402 KO:K12827
InterPro:IPR024598 InterPro:IPR021966 Pfam:PF11931 Pfam:PF12108
HOGENOM:HOG000160935 CTD:10946 HOVERGEN:HBG054452 OMA:YITYLST
OrthoDB:EOG42FSHC EMBL:BC099183 IPI:IPI00565197
RefSeq:NP_001020869.1 UniGene:Rn.16732 SMR:Q4KLI7 STRING:Q4KLI7
Ensembl:ENSRNOT00000010373 GeneID:313583 KEGG:rno:313583
InParanoid:Q4KLI7 NextBio:666476 Genevestigator:Q4KLI7
Uniprot:Q4KLI7
Length = 501
Score = 858 (307.1 bits), Expect = 8.9e-86, P = 8.9e-86
Identities = 174/270 (64%), Positives = 192/270 (71%)
Query: 97 KEAGSVLTHVGAHLDLSAFSSWEELASLGLDRLK------------TLEERAQRLFSTKG 144
KE S LTH GAHLDLSAFSSWEELASLGLDRLK TLEERAQRLFSTKG
Sbjct: 231 KETSSALTHAGAHLDLSAFSSWEELASLGLDRLKSALLALGLKCGGTLEERAQRLFSTKG 290
Query: 145 KT--ALDPSLLAKSKPDKGLKSKQQERQKEIAGLEAQIYKLAEQVSEQRSATKDNVQRKQ 202
K+ +LD SL AK+ KG K + ER K+IA LEAQIY+ E + EQR T +NVQRKQ
Sbjct: 291 KSLESLDTSLFAKNPKSKGTK-RDTERNKDIAFLEAQIYEYVEILGEQRQLTHENVQRKQ 349
Query: 203 XXXXXXXXXXXXX--XXXXTSDEDDEVPYNPKNLPLGWDGKPIPYWLYKLHGLNISYTCE 260
+ DE++E+ YNPKNLPLGWDGKPIPYWLYKLHGLNI+Y CE
Sbjct: 350 ARTGEEREEEEEEQISESESEDEENEIIYNPKNLPLGWDGKPIPYWLYKLHGLNINYNCE 409
Query: 261 ICGNFVYKGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDALALWEKLKAXXXXX 320
ICGN+ Y+GPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDA++LW KLK
Sbjct: 410 ICGNYTYRGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWAKLKLQKASE 469
Query: 321 XXXXXXXXXXXDSLGNVVNRKTYEDLKRQG 350
DS GNVVN+KTYEDLKRQG
Sbjct: 470 RWQPDTEEEYEDSSGNVVNKKTYEDLKRQG 499
Score = 210 (79.0 bits), Expect = 7.6e-26, Sum P(2) = 7.6e-26
Identities = 50/100 (50%), Positives = 60/100 (60%)
Query: 1 TLEERAQRLFSTKGKT--ALDPSLLAKSKPDKGLKSKQQERQKEIAGLEAQIYKLAEQVS 58
TLEERAQRLFSTKGK+ +LD SL AK+ KG K + ER K+IA LEAQIY+ E +
Sbjct: 277 TLEERAQRLFSTKGKSLESLDTSLFAKNPKSKGTK-RDTERNKDIAFLEAQIYEYVEILG 335
Query: 59 EQRSATKDNVQRKQXXXXXXXXXXXXXXXXXTSDEDDEKE 98
EQR T +NVQRKQ + ED+E E
Sbjct: 336 EQRQLTHENVQRKQARTGEEREEEEEEQISESESEDEENE 375
Score = 144 (55.7 bits), Expect = 7.6e-26, Sum P(2) = 7.6e-26
Identities = 26/31 (83%), Positives = 29/31 (93%)
Query: 351 WQPEQEEEFEDSLGNVVNRKTYEDLKRQGLL 381
WQP+ EEE+EDS GNVVN+KTYEDLKRQGLL
Sbjct: 471 WQPDTEEEYEDSSGNVVNKKTYEDLKRQGLL 501
>UNIPROTKB|E2QXU5 [details] [associations]
symbol:SF3A3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000690 InterPro:IPR015880
PROSITE:PS50171 SMART:SM00355 GO:GO:0005634 GO:GO:0008270
GO:GO:0003676 GeneTree:ENSGT00530000063402 KO:K12827
InterPro:IPR024598 InterPro:IPR021966 Pfam:PF11931 Pfam:PF12108
CTD:10946 OMA:YITYLST EMBL:AAEX03008727 EMBL:AAEX03009589
RefSeq:XP_532553.2 Ensembl:ENSCAFT00000001065
Ensembl:ENSCAFT00000005182 GeneID:475326 KEGG:cfa:475326
NextBio:20851179 Uniprot:E2QXU5
Length = 501
Score = 857 (306.7 bits), Expect = 1.1e-85, P = 1.1e-85
Identities = 174/270 (64%), Positives = 192/270 (71%)
Query: 97 KEAGSVLTHVGAHLDLSAFSSWEELASLGLDRLK------------TLEERAQRLFSTKG 144
KE S LTH GAHLDLSAFSSWEELASLGLDRLK TLEERAQRLFSTKG
Sbjct: 231 KETSSALTHAGAHLDLSAFSSWEELASLGLDRLKSALLALGLKCGGTLEERAQRLFSTKG 290
Query: 145 KT--ALDPSLLAKSKPDKGLKSKQQERQKEIAGLEAQIYKLAEQVSEQRSATKDNVQRKQ 202
K+ +LD SL AK+ KG K + ER K+IA LEAQIY+ E + EQR T +NVQRKQ
Sbjct: 291 KSLESLDTSLFAKNPKSKGTK-RDTERNKDIAFLEAQIYEYVEILGEQRHLTHENVQRKQ 349
Query: 203 XXXXXXXXXXXXX--XXXXTSDEDDEVPYNPKNLPLGWDGKPIPYWLYKLHGLNISYTCE 260
+ DE++E+ YNPKNLPLGWDGKPIPYWLYKLHGLNI+Y CE
Sbjct: 350 ARTGEEREEEEEEQISESESEDEENEIIYNPKNLPLGWDGKPIPYWLYKLHGLNINYNCE 409
Query: 261 ICGNFVYKGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDALALWEKLKAXXXXX 320
ICGN+ Y+GPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDA++LW KLK
Sbjct: 410 ICGNYTYRGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWAKLKLQKASE 469
Query: 321 XXXXXXXXXXXDSLGNVVNRKTYEDLKRQG 350
DS GNVVN+KTYEDLKRQG
Sbjct: 470 RWQPDTEEEYEDSSGNVVNKKTYEDLKRQG 499
Score = 209 (78.6 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 50/100 (50%), Positives = 60/100 (60%)
Query: 1 TLEERAQRLFSTKGKT--ALDPSLLAKSKPDKGLKSKQQERQKEIAGLEAQIYKLAEQVS 58
TLEERAQRLFSTKGK+ +LD SL AK+ KG K + ER K+IA LEAQIY+ E +
Sbjct: 277 TLEERAQRLFSTKGKSLESLDTSLFAKNPKSKGTK-RDTERNKDIAFLEAQIYEYVEILG 335
Query: 59 EQRSATKDNVQRKQXXXXXXXXXXXXXXXXXTSDEDDEKE 98
EQR T +NVQRKQ + ED+E E
Sbjct: 336 EQRHLTHENVQRKQARTGEEREEEEEEQISESESEDEENE 375
Score = 144 (55.7 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 26/31 (83%), Positives = 29/31 (93%)
Query: 351 WQPEQEEEFEDSLGNVVNRKTYEDLKRQGLL 381
WQP+ EEE+EDS GNVVN+KTYEDLKRQGLL
Sbjct: 471 WQPDTEEEYEDSSGNVVNKKTYEDLKRQGLL 501
>UNIPROTKB|E7EUT8 [details] [associations]
symbol:SF3A3 "Splicing factor 3A subunit 3" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000690 InterPro:IPR015880 PROSITE:PS50171
SMART:SM00355 GO:GO:0005634 GO:GO:0008270 GO:GO:0003676
EMBL:AL603790 InterPro:IPR024598 Pfam:PF11931 HGNC:HGNC:10767
ChiTaRS:SF3A3 IPI:IPI00908449 ProteinModelPortal:E7EUT8
PRIDE:E7EUT8 Ensembl:ENST00000448721 UCSC:uc010oik.2
ArrayExpress:E7EUT8 Bgee:E7EUT8 Uniprot:E7EUT8
Length = 448
Score = 857 (306.7 bits), Expect = 1.1e-85, P = 1.1e-85
Identities = 174/270 (64%), Positives = 192/270 (71%)
Query: 97 KEAGSVLTHVGAHLDLSAFSSWEELASLGLDRLK------------TLEERAQRLFSTKG 144
KE S LTH GAHLDLSAFSSWEELASLGLDRLK TLEERAQRLFSTKG
Sbjct: 178 KETSSALTHAGAHLDLSAFSSWEELASLGLDRLKSALLALGLKCGGTLEERAQRLFSTKG 237
Query: 145 KT--ALDPSLLAKSKPDKGLKSKQQERQKEIAGLEAQIYKLAEQVSEQRSATKDNVQRKQ 202
K+ +LD SL AK+ KG K + ER K+IA LEAQIY+ E + EQR T +NVQRKQ
Sbjct: 238 KSLESLDTSLFAKNPKSKGTK-RDTERNKDIAFLEAQIYEYVEILGEQRHLTHENVQRKQ 296
Query: 203 XXXXXXXXXXXXX--XXXXTSDEDDEVPYNPKNLPLGWDGKPIPYWLYKLHGLNISYTCE 260
+ DE++E+ YNPKNLPLGWDGKPIPYWLYKLHGLNI+Y CE
Sbjct: 297 ARTGEEREEEEEEQISESESEDEENEIIYNPKNLPLGWDGKPIPYWLYKLHGLNINYNCE 356
Query: 261 ICGNFVYKGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDALALWEKLKAXXXXX 320
ICGN+ Y+GPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDA++LW KLK
Sbjct: 357 ICGNYTYRGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWAKLKLQKASE 416
Query: 321 XXXXXXXXXXXDSLGNVVNRKTYEDLKRQG 350
DS GNVVN+KTYEDLKRQG
Sbjct: 417 RWQPDTEEEYEDSSGNVVNKKTYEDLKRQG 446
Score = 209 (78.6 bits), Expect = 5.9e-26, Sum P(2) = 5.9e-26
Identities = 50/100 (50%), Positives = 60/100 (60%)
Query: 1 TLEERAQRLFSTKGKT--ALDPSLLAKSKPDKGLKSKQQERQKEIAGLEAQIYKLAEQVS 58
TLEERAQRLFSTKGK+ +LD SL AK+ KG K + ER K+IA LEAQIY+ E +
Sbjct: 224 TLEERAQRLFSTKGKSLESLDTSLFAKNPKSKGTK-RDTERNKDIAFLEAQIYEYVEILG 282
Query: 59 EQRSATKDNVQRKQXXXXXXXXXXXXXXXXXTSDEDDEKE 98
EQR T +NVQRKQ + ED+E E
Sbjct: 283 EQRHLTHENVQRKQARTGEEREEEEEEQISESESEDEENE 322
Score = 144 (55.7 bits), Expect = 5.9e-26, Sum P(2) = 5.9e-26
Identities = 26/31 (83%), Positives = 29/31 (93%)
Query: 351 WQPEQEEEFEDSLGNVVNRKTYEDLKRQGLL 381
WQP+ EEE+EDS GNVVN+KTYEDLKRQGLL
Sbjct: 418 WQPDTEEEYEDSSGNVVNKKTYEDLKRQGLL 448
>UNIPROTKB|Q12874 [details] [associations]
symbol:SF3A3 "Splicing factor 3A subunit 3" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016607 "nuclear
speck" evidence=IEA] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;TAS] [GO:0005681 "spliceosomal complex"
evidence=IDA] [GO:0000389 "mRNA 3'-splice site recognition"
evidence=TAS] [GO:0006397 "mRNA processing" evidence=IMP]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_71 InterPro:IPR000690 InterPro:IPR015880
PROSITE:PS50171 SMART:SM00355 GO:GO:0005654 GO:GO:0046872
EMBL:CH471059 GO:GO:0016607 GO:GO:0008270 Reactome:REACT_1675
GO:GO:0003676 GO:GO:0071013 EMBL:AL603790 GO:GO:0000389
eggNOG:COG5188 KO:K12827 InterPro:IPR024598 InterPro:IPR021966
Pfam:PF11931 Pfam:PF12108 HOGENOM:HOG000160935 PDB:2DT7 PDBsum:2DT7
EMBL:U08815 EMBL:X81789 EMBL:BC002395 EMBL:BC011523 IPI:IPI00029764
PIR:A55749 RefSeq:NP_006793.1 UniGene:Hs.77897
ProteinModelPortal:Q12874 SMR:Q12874 DIP:DIP-882N IntAct:Q12874
MINT:MINT-1467744 STRING:Q12874 PhosphoSite:Q12874 DMDM:17380310
PaxDb:Q12874 PeptideAtlas:Q12874 PRIDE:Q12874 DNASU:10946
Ensembl:ENST00000373019 GeneID:10946 KEGG:hsa:10946 UCSC:uc001cci.3
CTD:10946 GeneCards:GC01M038422 HGNC:HGNC:10767 HPA:HPA032054
MIM:605596 neXtProt:NX_Q12874 PharmGKB:PA35685 HOVERGEN:HBG054452
InParanoid:Q12874 OMA:YITYLST OrthoDB:EOG42FSHC PhylomeDB:Q12874
ChiTaRS:SF3A3 EvolutionaryTrace:Q12874 GenomeRNAi:10946
NextBio:41589 ArrayExpress:Q12874 Bgee:Q12874 CleanEx:HS_SF3A3
Genevestigator:Q12874 GermOnline:ENSG00000183431 Uniprot:Q12874
Length = 501
Score = 857 (306.7 bits), Expect = 1.1e-85, P = 1.1e-85
Identities = 174/270 (64%), Positives = 192/270 (71%)
Query: 97 KEAGSVLTHVGAHLDLSAFSSWEELASLGLDRLK------------TLEERAQRLFSTKG 144
KE S LTH GAHLDLSAFSSWEELASLGLDRLK TLEERAQRLFSTKG
Sbjct: 231 KETSSALTHAGAHLDLSAFSSWEELASLGLDRLKSALLALGLKCGGTLEERAQRLFSTKG 290
Query: 145 KT--ALDPSLLAKSKPDKGLKSKQQERQKEIAGLEAQIYKLAEQVSEQRSATKDNVQRKQ 202
K+ +LD SL AK+ KG K + ER K+IA LEAQIY+ E + EQR T +NVQRKQ
Sbjct: 291 KSLESLDTSLFAKNPKSKGTK-RDTERNKDIAFLEAQIYEYVEILGEQRHLTHENVQRKQ 349
Query: 203 XXXXXXXXXXXXX--XXXXTSDEDDEVPYNPKNLPLGWDGKPIPYWLYKLHGLNISYTCE 260
+ DE++E+ YNPKNLPLGWDGKPIPYWLYKLHGLNI+Y CE
Sbjct: 350 ARTGEEREEEEEEQISESESEDEENEIIYNPKNLPLGWDGKPIPYWLYKLHGLNINYNCE 409
Query: 261 ICGNFVYKGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDALALWEKLKAXXXXX 320
ICGN+ Y+GPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDA++LW KLK
Sbjct: 410 ICGNYTYRGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWAKLKLQKASE 469
Query: 321 XXXXXXXXXXXDSLGNVVNRKTYEDLKRQG 350
DS GNVVN+KTYEDLKRQG
Sbjct: 470 RWQPDTEEEYEDSSGNVVNKKTYEDLKRQG 499
Score = 209 (78.6 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 50/100 (50%), Positives = 60/100 (60%)
Query: 1 TLEERAQRLFSTKGKT--ALDPSLLAKSKPDKGLKSKQQERQKEIAGLEAQIYKLAEQVS 58
TLEERAQRLFSTKGK+ +LD SL AK+ KG K + ER K+IA LEAQIY+ E +
Sbjct: 277 TLEERAQRLFSTKGKSLESLDTSLFAKNPKSKGTK-RDTERNKDIAFLEAQIYEYVEILG 335
Query: 59 EQRSATKDNVQRKQXXXXXXXXXXXXXXXXXTSDEDDEKE 98
EQR T +NVQRKQ + ED+E E
Sbjct: 336 EQRHLTHENVQRKQARTGEEREEEEEEQISESESEDEENE 375
Score = 144 (55.7 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 26/31 (83%), Positives = 29/31 (93%)
Query: 351 WQPEQEEEFEDSLGNVVNRKTYEDLKRQGLL 381
WQP+ EEE+EDS GNVVN+KTYEDLKRQGLL
Sbjct: 471 WQPDTEEEYEDSSGNVVNKKTYEDLKRQGLL 501
>UNIPROTKB|F1SV40 [details] [associations]
symbol:SF3A3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000690 InterPro:IPR015880 PROSITE:PS50171
SMART:SM00355 GO:GO:0008270 GO:GO:0006397 GO:GO:0003676
GO:GO:0071013 GeneTree:ENSGT00530000063402 KO:K12827
InterPro:IPR024598 InterPro:IPR021966 Pfam:PF11931 Pfam:PF12108
CTD:10946 OMA:YITYLST EMBL:CR956649 RefSeq:XP_003127843.1
UniGene:Ssc.11044 Ensembl:ENSSSCT00000004039 GeneID:100512288
KEGG:ssc:100512288 Uniprot:F1SV40
Length = 501
Score = 857 (306.7 bits), Expect = 1.1e-85, P = 1.1e-85
Identities = 174/270 (64%), Positives = 192/270 (71%)
Query: 97 KEAGSVLTHVGAHLDLSAFSSWEELASLGLDRLK------------TLEERAQRLFSTKG 144
KE S LTH GAHLDLSAFSSWEELASLGLDRLK TLEERAQRLFSTKG
Sbjct: 231 KETSSALTHAGAHLDLSAFSSWEELASLGLDRLKSALLALGLKCGGTLEERAQRLFSTKG 290
Query: 145 KT--ALDPSLLAKSKPDKGLKSKQQERQKEIAGLEAQIYKLAEQVSEQRSATKDNVQRKQ 202
K+ +LD SL AK+ KG K + ER K+IA LEAQIY+ E + EQR T +NVQRKQ
Sbjct: 291 KSLESLDTSLFAKNPKSKGTK-RDTERNKDIAFLEAQIYEYVEILGEQRHLTHENVQRKQ 349
Query: 203 XXXXXXXXXXXXX--XXXXTSDEDDEVPYNPKNLPLGWDGKPIPYWLYKLHGLNISYTCE 260
+ DE++E+ YNPKNLPLGWDGKPIPYWLYKLHGLNI+Y CE
Sbjct: 350 ARTGEEREEEEEEQISESESEDEENEIIYNPKNLPLGWDGKPIPYWLYKLHGLNINYNCE 409
Query: 261 ICGNFVYKGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDALALWEKLKAXXXXX 320
ICGN+ Y+GPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDA++LW KLK
Sbjct: 410 ICGNYTYRGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWAKLKLQKASE 469
Query: 321 XXXXXXXXXXXDSLGNVVNRKTYEDLKRQG 350
DS GNVVN+KTYEDLKRQG
Sbjct: 470 RWQPDTEEEYEDSSGNVVNKKTYEDLKRQG 499
Score = 209 (78.6 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 50/100 (50%), Positives = 60/100 (60%)
Query: 1 TLEERAQRLFSTKGKT--ALDPSLLAKSKPDKGLKSKQQERQKEIAGLEAQIYKLAEQVS 58
TLEERAQRLFSTKGK+ +LD SL AK+ KG K + ER K+IA LEAQIY+ E +
Sbjct: 277 TLEERAQRLFSTKGKSLESLDTSLFAKNPKSKGTK-RDTERNKDIAFLEAQIYEYVEILG 335
Query: 59 EQRSATKDNVQRKQXXXXXXXXXXXXXXXXXTSDEDDEKE 98
EQR T +NVQRKQ + ED+E E
Sbjct: 336 EQRHLTHENVQRKQARTGEEREEEEEEQISESESEDEENE 375
Score = 144 (55.7 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 26/31 (83%), Positives = 29/31 (93%)
Query: 351 WQPEQEEEFEDSLGNVVNRKTYEDLKRQGLL 381
WQP+ EEE+EDS GNVVN+KTYEDLKRQGLL
Sbjct: 471 WQPDTEEEYEDSSGNVVNKKTYEDLKRQGLL 501
>UNIPROTKB|Q3SWY7 [details] [associations]
symbol:SF3A3 "Splicing factor 3a, subunit 3" species:9913
"Bos taurus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000690 InterPro:IPR015880
PROSITE:PS50171 SMART:SM00355 GO:GO:0008270 GO:GO:0006397
GO:GO:0003676 GO:GO:0071013 eggNOG:COG5188
GeneTree:ENSGT00530000063402 KO:K12827 InterPro:IPR024598
InterPro:IPR021966 Pfam:PF11931 Pfam:PF12108 HOGENOM:HOG000160935
CTD:10946 HOVERGEN:HBG054452 OMA:YITYLST OrthoDB:EOG42FSHC
EMBL:DAAA02009167 EMBL:BC104596 EMBL:BT030554 IPI:IPI00686585
RefSeq:NP_001029720.1 UniGene:Bt.53270 SMR:Q3SWY7 STRING:Q3SWY7
Ensembl:ENSBTAT00000009603 GeneID:523250 KEGG:bta:523250
InParanoid:Q3SWY7 NextBio:20873695 Uniprot:Q3SWY7
Length = 501
Score = 856 (306.4 bits), Expect = 1.4e-85, P = 1.4e-85
Identities = 174/270 (64%), Positives = 192/270 (71%)
Query: 97 KEAGSVLTHVGAHLDLSAFSSWEELASLGLDRLK------------TLEERAQRLFSTKG 144
KE S LTH GAHLDLSAFSSWEELASLGLDRLK TLEERAQRLFSTKG
Sbjct: 231 KETSSALTHAGAHLDLSAFSSWEELASLGLDRLKSALLALGLKCGGTLEERAQRLFSTKG 290
Query: 145 KT--ALDPSLLAKSKPDKGLKSKQQERQKEIAGLEAQIYKLAEQVSEQRSATKDNVQRKQ 202
K+ +LD SL AK+ KG K + ER K+IA LEAQIY+ E + EQR T +NVQRKQ
Sbjct: 291 KSLESLDTSLFAKNPKTKGTK-RDTERNKDIAFLEAQIYEYVEILGEQRHLTHENVQRKQ 349
Query: 203 XXXXXXXXXXXXX--XXXXTSDEDDEVPYNPKNLPLGWDGKPIPYWLYKLHGLNISYTCE 260
+ DE++E+ YNPKNLPLGWDGKPIPYWLYKLHGLNI+Y CE
Sbjct: 350 ARTGEEREEEEEEQISESESEDEENEIIYNPKNLPLGWDGKPIPYWLYKLHGLNINYNCE 409
Query: 261 ICGNFVYKGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDALALWEKLKAXXXXX 320
ICGN+ Y+GPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDA++LW KLK
Sbjct: 410 ICGNYTYRGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWAKLKLQKASE 469
Query: 321 XXXXXXXXXXXDSLGNVVNRKTYEDLKRQG 350
DS GNVVN+KTYEDLKRQG
Sbjct: 470 RWQPDTEEEYEDSSGNVVNKKTYEDLKRQG 499
Score = 208 (78.3 bits), Expect = 1.4e-25, Sum P(2) = 1.4e-25
Identities = 50/100 (50%), Positives = 60/100 (60%)
Query: 1 TLEERAQRLFSTKGKT--ALDPSLLAKSKPDKGLKSKQQERQKEIAGLEAQIYKLAEQVS 58
TLEERAQRLFSTKGK+ +LD SL AK+ KG K + ER K+IA LEAQIY+ E +
Sbjct: 277 TLEERAQRLFSTKGKSLESLDTSLFAKNPKTKGTK-RDTERNKDIAFLEAQIYEYVEILG 335
Query: 59 EQRSATKDNVQRKQXXXXXXXXXXXXXXXXXTSDEDDEKE 98
EQR T +NVQRKQ + ED+E E
Sbjct: 336 EQRHLTHENVQRKQARTGEEREEEEEEQISESESEDEENE 375
Score = 144 (55.7 bits), Expect = 1.4e-25, Sum P(2) = 1.4e-25
Identities = 26/31 (83%), Positives = 29/31 (93%)
Query: 351 WQPEQEEEFEDSLGNVVNRKTYEDLKRQGLL 381
WQP+ EEE+EDS GNVVN+KTYEDLKRQGLL
Sbjct: 471 WQPDTEEEYEDSSGNVVNKKTYEDLKRQGLL 501
>FB|FBgn0014366 [details] [associations]
symbol:noi "noisette" species:7227 "Drosophila melanogaster"
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;ISS] [GO:0009566
"fertilization" evidence=IMP] [GO:0005686 "U2 snRNP" evidence=ISS]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0007052 "mitotic spindle
organization" evidence=IMP] [GO:0051533 "positive regulation of
NFAT protein import into nucleus" evidence=IMP] [GO:0007067
"mitosis" evidence=IMP] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR000690 InterPro:IPR015880 PROSITE:PS50171 SMART:SM00355
EMBL:AE014297 GO:GO:0007067 GO:GO:0007052 GO:GO:0046872
GO:GO:0008270 GO:GO:0009566 GO:GO:0003676 GO:GO:0051533
GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 GO:GO:0005686
EMBL:AJ223042 EMBL:AY051676 RefSeq:NP_477114.1 UniGene:Dm.4519
ProteinModelPortal:O46106 SMR:O46106 DIP:DIP-19450N IntAct:O46106
MINT:MINT-279361 STRING:O46106 PaxDb:O46106 PRIDE:O46106
EnsemblMetazoa:FBtr0078751 GeneID:40678 KEGG:dme:Dmel_CG2925
UCSC:CG2925-RA CTD:40678 FlyBase:FBgn0014366 eggNOG:COG5188
GeneTree:ENSGT00530000063402 HOGENOM:HOG000102022 InParanoid:O46106
KO:K12827 OMA:ELYEDRD OrthoDB:EOG4QRFK9 PhylomeDB:O46106
GenomeRNAi:40678 NextBio:819998 Bgee:O46106 GermOnline:CG2925
InterPro:IPR024598 InterPro:IPR021966 Pfam:PF11931 Pfam:PF12108
Uniprot:O46106
Length = 503
Score = 804 (288.1 bits), Expect = 4.7e-80, P = 4.7e-80
Identities = 160/248 (64%), Positives = 179/248 (72%)
Query: 108 AHLDLSAFSSWEELASLGLDRLKTLEERAQRLFSTKGKTALDPSLLAKSKPDK--GLKSK 165
A L L S L +LGL TLEERAQRLFSTKGK+ LDP+L+AK K +S+
Sbjct: 256 ASLGLDRLKS--ALVALGLKCGGTLEERAQRLFSTKGKSTLDPALMAKKPSAKTASAQSR 313
Query: 166 QQERQKEIAGLEAQIYKLAEQVSEQRSATKDNVQRKQXXXXXXXXXXXXXXXXXTSDED- 224
+ ER KEIA LEA +YK A+ +SEQR+ATK+NVQRKQ +++D
Sbjct: 314 EHERHKEIAQLEALLYKYADLLSEQRAATKENVQRKQARTGGERDDSDVEASESDNEDDP 373
Query: 225 --DEVPYNPKNLPLGWDGKPIPYWLYKLHGLNISYTCEICGNFVYKGPKAFQRHFAEWRH 282
D+VPYNPKNLPLGWDGKPIPYWLYKLHGLNISY CEICGNF YKGPKAFQRHFAEWRH
Sbjct: 374 DADDVPYNPKNLPLGWDGKPIPYWLYKLHGLNISYNCEICGNFTYKGPKAFQRHFAEWRH 433
Query: 283 AHGMRCLGIPNTAHFANVTQIEDALALWEKLKAXXXXXXXXXXXXXXXXDSLGNVVNRKT 342
AHGMRCLGIPNTAHFANVTQIEDA+ LWEKLK+ DSLGNVVNRKT
Sbjct: 434 AHGMRCLGIPNTAHFANVTQIEDAITLWEKLKSQKQSERWVADQEEEFEDSLGNVVNRKT 493
Query: 343 YEDLKRQG 350
+EDLKRQG
Sbjct: 494 FEDLKRQG 501
Score = 337 (123.7 bits), Expect = 6.9e-44, Sum P(2) = 6.9e-44
Identities = 79/151 (52%), Positives = 95/151 (62%)
Query: 97 KEAGSVLTHVGAHLDLSAFSSWEELASLGLDRLK------------TLEERAQRLFSTKG 144
KE S L + GAHLDLSAFSSWEELASLGLDRLK TLEERAQRLFSTKG
Sbjct: 231 KETESALANTGAHLDLSAFSSWEELASLGLDRLKSALVALGLKCGGTLEERAQRLFSTKG 290
Query: 145 KTALDPSLLAKSKPDK--GLKSKQQERQKEIAGLEAQIYKLAEQVSEQRSATKDNVQRKQ 202
K+ LDP+L+AK K +S++ ER KEIA LEA +YK A+ +SEQR+ATK+NVQRKQ
Sbjct: 291 KSTLDPALMAKKPSAKTASAQSREHERHKEIAQLEALLYKYADLLSEQRAATKENVQRKQ 350
Query: 203 XXXXXXXXXXXXXXXXXTSDEDDEVPYNPKN 233
+++D + P N
Sbjct: 351 ARTGGERDDSDVEASESDNEDDPDADDVPYN 381
Score = 232 (86.7 bits), Expect = 2.8e-29, Sum P(2) = 2.8e-29
Identities = 53/104 (50%), Positives = 67/104 (64%)
Query: 1 TLEERAQRLFSTKGKTALDPSLLAKSKPDK--GLKSKQQERQKEIAGLEAQIYKLAEQVS 58
TLEERAQRLFSTKGK+ LDP+L+AK K +S++ ER KEIA LEA +YK A+ +S
Sbjct: 277 TLEERAQRLFSTKGKSTLDPALMAKKPSAKTASAQSREHERHKEIAQLEALLYKYADLLS 336
Query: 59 EQRSATKDNVQRKQXXXXXXXXXXXXXXXXXTSDEDDEKEAGSV 102
EQR+ATK+NVQRKQ SD +D+ +A V
Sbjct: 337 EQRAATKENVQRKQARTGGERDDSDVEASE--SDNEDDPDADDV 378
Score = 145 (56.1 bits), Expect = 6.9e-44, Sum P(2) = 6.9e-44
Identities = 31/43 (72%), Positives = 34/43 (79%)
Query: 343 YEDLKRQG----WQPEQEEEFEDSLGNVVNRKTYEDLKRQGLL 381
+E LK Q W +QEEEFEDSLGNVVNRKT+EDLKRQGLL
Sbjct: 461 WEKLKSQKQSERWVADQEEEFEDSLGNVVNRKTFEDLKRQGLL 503
>WB|WBGene00011758 [details] [associations]
symbol:T13H5.4 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0010171
"body morphogenesis" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040039 "inductive cell
migration" evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0016477 "cell
migration" evidence=IMP] [GO:0007281 "germ cell development"
evidence=IMP] InterPro:IPR000690 InterPro:IPR015880 PROSITE:PS50171
SMART:SM00355 GO:GO:0005634 GO:GO:0009792 GO:GO:0008406
GO:GO:0018996 GO:GO:0008270 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0040039 GO:GO:0007281
GO:GO:0040020 eggNOG:COG5188 GeneTree:ENSGT00530000063402 KO:K12827
InterPro:IPR024598 InterPro:IPR021966 Pfam:PF11931 Pfam:PF12108
HOGENOM:HOG000160935 EMBL:Z66524 OMA:YITYLST PIR:A88238 PIR:T24901
RefSeq:NP_495799.1 ProteinModelPortal:Q22469 SMR:Q22469
DIP:DIP-25197N IntAct:Q22469 MINT:MINT-1067063 STRING:Q22469
PaxDb:Q22469 EnsemblMetazoa:T13H5.4 GeneID:174364
KEGG:cel:CELE_T13H5.4 UCSC:T13H5.4 CTD:174364 WormBase:T13H5.4
InParanoid:Q22469 NextBio:883718 Uniprot:Q22469
Length = 500
Score = 663 (238.4 bits), Expect = 4.1e-65, P = 4.1e-65
Identities = 136/257 (52%), Positives = 164/257 (63%)
Query: 108 AHLDLSAFSSWEELASLGLDRLK------------TLEERAQRLFSTKGKTALDPSLLAK 155
A +DLS ++S EEL LGL+RLK TL+ERA RLF+TKG D A
Sbjct: 243 AAVDLSPYNSAEELEGLGLERLKGALMAIGLKCGGTLKERADRLFATKGHKLSDLEKAAM 302
Query: 156 SKPDKGLKSKQQERQKEIAGLEAQIYKLAEQVSEQRSATKDNVQRKQXXXXXXXXXXXXX 215
S + + KQ + +A EA I LA+ ++E+R+ T++NV+RKQ
Sbjct: 303 SSNNSDAE-KQNAKNLTLAQTEAHIMALADILAEERTGTRENVERKQARSAGEVEEEEEE 361
Query: 216 XXXXTSDE--DDEVPYNPKNLPLGWDGKPIPYWLYKLHGLNISYTCEICGNFVYKGPKAF 273
+E D+ PYNPKNLPLGWDGKPIPYWLYKLHGLN+SY+CEICGN YKGPKAF
Sbjct: 362 EIVIEEEEEIDESAPYNPKNLPLGWDGKPIPYWLYKLHGLNLSYSCEICGNQTYKGPKAF 421
Query: 274 QRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDALALWEKLKAXXXXXXXXXXXXXXXXDS 333
Q+HF EWRH+HGMRCLGIPNT+HFAN+T+I+DAL LW KLK DS
Sbjct: 422 QKHFNEWRHSHGMRCLGIPNTSHFANITKIKDALDLWNKLKTEKEMAKWNPDIDEEYEDS 481
Query: 334 LGNVVNRKTYEDLKRQG 350
GNVV RK YEDLKRQG
Sbjct: 482 SGNVVTRKMYEDLKRQG 498
Score = 128 (50.1 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 25/41 (60%), Positives = 32/41 (78%)
Query: 341 KTYEDLKRQGWQPEQEEEFEDSLGNVVNRKTYEDLKRQGLL 381
KT +++ + W P+ +EE+EDS GNVV RK YEDLKRQGLL
Sbjct: 462 KTEKEMAK--WNPDIDEEYEDSSGNVVTRKMYEDLKRQGLL 500
Score = 127 (49.8 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 30/72 (41%), Positives = 44/72 (61%)
Query: 1 TLEERAQRLFSTKGKTALDPSLLAKSKPDKGLKSKQQERQKEIAGLEAQIYKLAEQVSEQ 60
TL+ERA RLF+TKG D A S + + KQ + +A EA I LA+ ++E+
Sbjct: 278 TLKERADRLFATKGHKLSDLEKAAMSSNNSDAE-KQNAKNLTLAQTEAHIMALADILAEE 336
Query: 61 RSATKDNVQRKQ 72
R+ T++NV+RKQ
Sbjct: 337 RTGTRENVERKQ 348
Score = 44 (20.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 14/58 (24%), Positives = 26/58 (44%)
Query: 126 LDRLKTLEERAQRLFSTKGKTALDPSLLAKSKPDKGLKSKQ-QERQKEIAGLEAQIYK 182
L+ ++ L E +RL K + L K+K + + K +R ++ A+ YK
Sbjct: 5 LETIRNLHEERERLIDITVKEKIAEKLTHKAKVNSEQRVKTFVDRYYSVSAELAKFYK 62
>UNIPROTKB|Q22469 [details] [associations]
symbol:T13H5.4 "Protein T13H5.4" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000690 InterPro:IPR015880 PROSITE:PS50171
SMART:SM00355 GO:GO:0005634 GO:GO:0009792 GO:GO:0008406
GO:GO:0018996 GO:GO:0008270 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0040039 GO:GO:0007281
GO:GO:0040020 eggNOG:COG5188 GeneTree:ENSGT00530000063402 KO:K12827
InterPro:IPR024598 InterPro:IPR021966 Pfam:PF11931 Pfam:PF12108
HOGENOM:HOG000160935 EMBL:Z66524 OMA:YITYLST PIR:A88238 PIR:T24901
RefSeq:NP_495799.1 ProteinModelPortal:Q22469 SMR:Q22469
DIP:DIP-25197N IntAct:Q22469 MINT:MINT-1067063 STRING:Q22469
PaxDb:Q22469 EnsemblMetazoa:T13H5.4 GeneID:174364
KEGG:cel:CELE_T13H5.4 UCSC:T13H5.4 CTD:174364 WormBase:T13H5.4
InParanoid:Q22469 NextBio:883718 Uniprot:Q22469
Length = 500
Score = 663 (238.4 bits), Expect = 4.1e-65, P = 4.1e-65
Identities = 136/257 (52%), Positives = 164/257 (63%)
Query: 108 AHLDLSAFSSWEELASLGLDRLK------------TLEERAQRLFSTKGKTALDPSLLAK 155
A +DLS ++S EEL LGL+RLK TL+ERA RLF+TKG D A
Sbjct: 243 AAVDLSPYNSAEELEGLGLERLKGALMAIGLKCGGTLKERADRLFATKGHKLSDLEKAAM 302
Query: 156 SKPDKGLKSKQQERQKEIAGLEAQIYKLAEQVSEQRSATKDNVQRKQXXXXXXXXXXXXX 215
S + + KQ + +A EA I LA+ ++E+R+ T++NV+RKQ
Sbjct: 303 SSNNSDAE-KQNAKNLTLAQTEAHIMALADILAEERTGTRENVERKQARSAGEVEEEEEE 361
Query: 216 XXXXTSDE--DDEVPYNPKNLPLGWDGKPIPYWLYKLHGLNISYTCEICGNFVYKGPKAF 273
+E D+ PYNPKNLPLGWDGKPIPYWLYKLHGLN+SY+CEICGN YKGPKAF
Sbjct: 362 EIVIEEEEEIDESAPYNPKNLPLGWDGKPIPYWLYKLHGLNLSYSCEICGNQTYKGPKAF 421
Query: 274 QRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDALALWEKLKAXXXXXXXXXXXXXXXXDS 333
Q+HF EWRH+HGMRCLGIPNT+HFAN+T+I+DAL LW KLK DS
Sbjct: 422 QKHFNEWRHSHGMRCLGIPNTSHFANITKIKDALDLWNKLKTEKEMAKWNPDIDEEYEDS 481
Query: 334 LGNVVNRKTYEDLKRQG 350
GNVV RK YEDLKRQG
Sbjct: 482 SGNVVTRKMYEDLKRQG 498
Score = 128 (50.1 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 25/41 (60%), Positives = 32/41 (78%)
Query: 341 KTYEDLKRQGWQPEQEEEFEDSLGNVVNRKTYEDLKRQGLL 381
KT +++ + W P+ +EE+EDS GNVV RK YEDLKRQGLL
Sbjct: 462 KTEKEMAK--WNPDIDEEYEDSSGNVVTRKMYEDLKRQGLL 500
Score = 127 (49.8 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 30/72 (41%), Positives = 44/72 (61%)
Query: 1 TLEERAQRLFSTKGKTALDPSLLAKSKPDKGLKSKQQERQKEIAGLEAQIYKLAEQVSEQ 60
TL+ERA RLF+TKG D A S + + KQ + +A EA I LA+ ++E+
Sbjct: 278 TLKERADRLFATKGHKLSDLEKAAMSSNNSDAE-KQNAKNLTLAQTEAHIMALADILAEE 336
Query: 61 RSATKDNVQRKQ 72
R+ T++NV+RKQ
Sbjct: 337 RTGTRENVERKQ 348
Score = 44 (20.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 14/58 (24%), Positives = 26/58 (44%)
Query: 126 LDRLKTLEERAQRLFSTKGKTALDPSLLAKSKPDKGLKSKQ-QERQKEIAGLEAQIYK 182
L+ ++ L E +RL K + L K+K + + K +R ++ A+ YK
Sbjct: 5 LETIRNLHEERERLIDITVKEKIAEKLTHKAKVNSEQRVKTFVDRYYSVSAELAKFYK 62
>TAIR|locus:2152855 [details] [associations]
symbol:ATO "ATROPOS" species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0045694
"regulation of embryo sac egg cell differentiation" evidence=IMP]
[GO:0000741 "karyogamy" evidence=RCA] [GO:0006312 "mitotic
recombination" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0009561 "megagametogenesis" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010074 "maintenance of meristem
identity" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016579 "protein deubiquitination" evidence=RCA] [GO:0019915
"lipid storage" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0050826 "response
to freezing" evidence=RCA] InterPro:IPR000690 InterPro:IPR015880
PROSITE:PS50171 SMART:SM00355 GO:GO:0005829 GO:GO:0005634
EMBL:CP002688 GO:GO:0008270 GO:GO:0003676 EMBL:AP002544 KO:K12827
InterPro:IPR024598 InterPro:IPR021966 Pfam:PF11931 Pfam:PF12108
HOGENOM:HOG000160935 OMA:FVYMGRR EMBL:AY039944 EMBL:AY113862
IPI:IPI00532165 RefSeq:NP_196234.3 UniGene:At.8012
ProteinModelPortal:Q9FG01 SMR:Q9FG01 IntAct:Q9FG01 STRING:Q9FG01
PRIDE:Q9FG01 EnsemblPlants:AT5G06160.1 GeneID:830503
KEGG:ath:AT5G06160 TAIR:At5g06160 InParanoid:Q9FG01
PhylomeDB:Q9FG01 ProtClustDB:CLSN2681031 ArrayExpress:Q9FG01
Genevestigator:Q9FG01 GO:GO:0045694 Uniprot:Q9FG01
Length = 504
Score = 500 (181.1 bits), Expect = 7.7e-52, Sum P(2) = 7.7e-52
Identities = 107/242 (44%), Positives = 137/242 (56%)
Query: 119 EELASLGLDRLKTLEERAQRLFSTKGKTA--LDPSLLAK----SKPDKGLKSKQQ-ERQK 171
E L +LGL T ++RA+RLF TK LD A+ K + KS + E K
Sbjct: 261 EALGALGLKVGGTPQQRAERLFLTKHTPLEKLDKKHFARPPHNGKQNGDAKSTHESENAK 320
Query: 172 EIAGLEAQIYKLAEQVSEQRSATKDNVQRKQXXXXXXXXXXXXXXXXXT---SDEDDEVP 228
EIA EA++ KL + E TK N+ +KQ T SD++D +
Sbjct: 321 EIALTEAKVKKLCNLLDETIERTKQNIVKKQSLTYEEMEGEREGEEANTELESDDEDGLI 380
Query: 229 YNPKNLPLGWDGKPIPYWLYKLHGLNISYTCEICGNFVYKGPKAFQRHFAEWRHAHGMRC 288
YNP LP+GWDGKPIPYWLYKLHGL + CEICGN+ Y G +AF+RHF EWRH HGMRC
Sbjct: 381 YNPLKLPIGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRC 440
Query: 289 LGIPNTAHFANVTQIEDALALWEKLKAXXXXXXXXXXXXXXXXDSLGNVVNRKTYEDLKR 348
LGIPNT +F +T IE+A LW++++ D GN+ N+KTY DL+R
Sbjct: 441 LGIPNTKNFNEITSIEEAKELWKRIQERQGVNKWRPELEEEYEDREGNIYNKKTYSDLQR 500
Query: 349 QG 350
QG
Sbjct: 501 QG 502
Score = 123 (48.4 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 23/38 (60%), Positives = 30/38 (78%)
Query: 347 KRQG---WQPEQEEEFEDSLGNVVNRKTYEDLKRQGLL 381
+RQG W+PE EEE+ED GN+ N+KTY DL+RQGL+
Sbjct: 467 ERQGVNKWRPELEEEYEDREGNIYNKKTYSDLQRQGLI 504
Score = 91 (37.1 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 32/105 (30%), Positives = 46/105 (43%)
Query: 1 TLEERAQRLFSTKGKTA--LDPSLLAK----SKPDKGLKSKQQ-ERQKEIAGLEAQIYKL 53
T ++RA+RLF TK LD A+ K + KS + E KEIA EA++ KL
Sbjct: 273 TPQQRAERLFLTKHTPLEKLDKKHFARPPHNGKQNGDAKSTHESENAKEIALTEAKVKKL 332
Query: 54 AEQVSEQRSATKDNVQRKQXXXXXXXXXXXXXXXXXTSDEDDEKE 98
+ E TK N+ +KQ T E D+++
Sbjct: 333 CNLLDETIERTKQNIVKKQSLTYEEMEGEREGEEANTELESDDED 377
Score = 55 (24.4 bits), Expect = 7.7e-52, Sum P(2) = 7.7e-52
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 110 LDLSAFSSWEELASLGLDRLK------------TLEERAQRLFSTK 143
+DL +S+ EEL +G ++LK T ++RA+RLF TK
Sbjct: 240 IDLDYYSTVEELVDVGPEKLKEALGALGLKVGGTPQQRAERLFLTK 285
>UNIPROTKB|G4N2Q7 [details] [associations]
symbol:MGG_12972 "Splicing factor 3a subunit 3"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000690
InterPro:IPR007087 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50171 SMART:SM00355 GO:GO:0005634 EMBL:CM001233
GO:GO:0008270 GO:GO:0003676 InterPro:IPR022755 Pfam:PF12171
KO:K12827 InterPro:IPR024598 InterPro:IPR021966 Pfam:PF11931
Pfam:PF12108 RefSeq:XP_003712369.1 ProteinModelPortal:G4N2Q7
EnsemblFungi:MGG_12972T0 GeneID:2675386 KEGG:mgr:MGG_12972
Uniprot:G4N2Q7
Length = 521
Score = 367 (134.2 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 62/129 (48%), Positives = 87/129 (67%)
Query: 222 DEDDEVPYNPKNLPLGWDGKPIPYWLYKLHGLNISYTCEICGNFVYKGPKAFQRHFAEWR 281
++ +E YNP LPL WDGKPIP+WLY+LHGL + + CEICGNFVY G +A+++HF E R
Sbjct: 391 EDGEEKIYNPLKLPLAWDGKPIPFWLYRLHGLGVEFPCEICGNFVYMGRRAYEKHFNEAR 450
Query: 282 HAHGMRCLGIPNTAHFANVTQIEDALALWEKLKAXXXXXXXXXXXXXXXXDSLGNVVNRK 341
H +G++CLGI NT+ F ++ IE+AL LW+K++ D+ GNV+ K
Sbjct: 451 HIYGLKCLGISNTSLFRDIISIEEALKLWDKIQRDRKRNMGDDGSVVQMEDAEGNVMPEK 510
Query: 342 TYEDLKRQG 350
Y DL++QG
Sbjct: 511 VYYDLQKQG 519
Score = 77 (32.2 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 22/79 (27%), Positives = 43/79 (54%)
Query: 125 GLDRLKTLEERAQRLFSTKGKTALDPSLLAKSKPDKGLK-SKQQERQKEIAGLEAQIYKL 183
G +K E++A+R + + A + + + P KG K S + +++ +A E ++ +L
Sbjct: 273 GRKHIKAAEQKAKR--TEENDDASEAA--STDAPTKGKKESAIRLKERAVAEREYRVTRL 328
Query: 184 AEQVSEQRSATKDNVQRKQ 202
E + +R TK NV+R+Q
Sbjct: 329 TEAMKTERDETKVNVERRQ 347
Score = 69 (29.3 bits), Expect = 2.5e-39, Sum P(2) = 2.5e-39
Identities = 16/46 (34%), Positives = 28/46 (60%)
Query: 28 PDKGLK-SKQQERQKEIAGLEAQIYKLAEQVSEQRSATKDNVQRKQ 72
P KG K S + +++ +A E ++ +L E + +R TK NV+R+Q
Sbjct: 302 PTKGKKESAIRLKERAVAEREYRVTRLTEAMKTERDETKVNVERRQ 347
>POMBASE|SPBC36.09 [details] [associations]
symbol:sap61 "U2 snRNP-associated protein sap61"
species:4896 "Schizosaccharomyces pombe" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0005686 "U2 snRNP"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0045292 "mRNA cis splicing, via
spliceosome" evidence=ISS] InterPro:IPR000690 InterPro:IPR003604
InterPro:IPR007087 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 PROSITE:PS50171 SMART:SM00355 SMART:SM00451
PomBase:SPBC36.09 GO:GO:0005829 GO:GO:0046872 EMBL:CU329671
GO:GO:0008270 GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003723
InterPro:IPR022755 Pfam:PF12171 GO:GO:0005686 GO:GO:0045292
eggNOG:COG5188 KO:K12827 InterPro:IPR024598 InterPro:IPR021966
Pfam:PF11931 Pfam:PF12108 HOGENOM:HOG000160935 OrthoDB:EOG43V34M
PIR:T40304 RefSeq:NP_595337.1 ProteinModelPortal:O59706
IntAct:O59706 STRING:O59706 EnsemblFungi:SPBC36.09.1 GeneID:2540932
KEGG:spo:SPBC36.09 OMA:FVYMGRR NextBio:20802047 Uniprot:O59706
Length = 492
Score = 379 (138.5 bits), Expect = 9.4e-40, Sum P(2) = 9.4e-40
Identities = 68/131 (51%), Positives = 84/131 (64%)
Query: 221 SDEDDEVP-YNPKNLPLGWDGKPIPYWLYKLHGLNISYTCEICGNFVYKGPKAFQRHFAE 279
SD+DDE YNP LPLGWDGKPIP+WL+KLHGL + CEICGN+VY G KAF +HF E
Sbjct: 360 SDQDDEEKIYNPLKLPLGWDGKPIPFWLWKLHGLGKEFPCEICGNYVYMGRKAFDKHFTE 419
Query: 280 WRHAHGMRCLGIPNTAHFANVTQIEDALALWEKLKAXXXXXXXXXXXXXXXXDSLGNVVN 339
RH +G++CLGI + F +T I++AL LW+K K D GNV++
Sbjct: 420 QRHIYGLKCLGISPSPLFNQITSIDEALQLWQKYKVDSKKRETTMASLNEMEDDEGNVMS 479
Query: 340 RKTYEDLKRQG 350
K Y DLK QG
Sbjct: 480 EKVYNDLKAQG 490
Score = 61 (26.5 bits), Expect = 9.4e-40, Sum P(2) = 9.4e-40
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 34 SKQQERQKEIAGLEAQIYKLAEQVSEQRSATKDNVQRKQ 72
+++Q+ K IA +E I KL + + R T++NV R+Q
Sbjct: 286 NEKQKGPKAIARIEFLIKKLTSLLDDVRKDTRENVVRRQ 324
Score = 61 (26.5 bits), Expect = 9.4e-40, Sum P(2) = 9.4e-40
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 164 SKQQERQKEIAGLEAQIYKLAEQVSEQRSATKDNVQRKQ 202
+++Q+ K IA +E I KL + + R T++NV R+Q
Sbjct: 286 NEKQKGPKAIARIEFLIKKLTSLLDDVRKDTRENVVRRQ 324
>ASPGD|ASPL0000009101 [details] [associations]
symbol:AN8015 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355 GO:GO:0008270
GO:GO:0005622 EMBL:BN001302 InterPro:IPR022755 Pfam:PF12171
EMBL:AACD01000139 eggNOG:COG5188 KO:K12827 InterPro:IPR024598
InterPro:IPR021966 Pfam:PF11931 Pfam:PF12108 HOGENOM:HOG000160935
OrthoDB:EOG43V34M OMA:YITYLST RefSeq:XP_681284.1
ProteinModelPortal:Q5AUL5 STRING:Q5AUL5
EnsemblFungi:CADANIAT00004035 GeneID:2868930 KEGG:ani:AN8015.2
Uniprot:Q5AUL5
Length = 502
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 82/202 (40%), Positives = 112/202 (55%)
Query: 161 GLKSKQQERQKEIAGLEAQIYKLAEQVSEQRSATKDNVQRKQXXXXXXXXXXXXXXXXXT 220
G + + +++ +A E ++ LA + +R ATK NV+R+Q T
Sbjct: 299 GPSAAHRLKERAVAEREHRVRSLARVLINERQATKINVERRQGMTERERQMELEAMLAET 358
Query: 221 SD-------EDDEVP----YNPKNLPLGWDGKPIPYWLYKLHGLNISYTCEICGNFVYKG 269
D E DE YNP LPL WDGKPIPYWLYKLHGL + Y+CEICGN+VY G
Sbjct: 359 EDAKGDRGNESDEEGEDRIYNPLKLPLAWDGKPIPYWLYKLHGLGVEYSCEICGNYVYMG 418
Query: 270 PKAFQRHFAEWRHAHGMRCLGIP-NTAHFANVTQIEDALALWEKLKAXXXXXXXXXXXXX 328
+AF +HF+E H G++CLGI NT F +T+I+DA+ LWEKL+
Sbjct: 419 RRAFDKHFSEALHIFGLKCLGITSNTNLFREITKIDDAIRLWEKLEQDRKKERDFRDNVV 478
Query: 329 XXXDSLGNVVNRKTYEDLKRQG 350
D+ GNV+ + Y DL++QG
Sbjct: 479 QMEDAEGNVMPERIYLDLQKQG 500
>DICTYBASE|DDB_G0270020 [details] [associations]
symbol:sf3a3 "splicing factor 3A subunit 3"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISS] [GO:0000389 "mRNA 3'-splice site
recognition" evidence=ISS] InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355 SMART:SM00451
dictyBase:DDB_G0270020 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0008270 GO:GO:0005681 GO:GO:0003676 GO:GO:0000389
eggNOG:COG5188 KO:K12827 InterPro:IPR024598 InterPro:IPR021966
Pfam:PF11931 Pfam:PF12108 RefSeq:XP_646474.1 STRING:Q55CK7
EnsemblProtists:DDB0229922 GeneID:8617435 KEGG:ddi:DDB_G0270020
InParanoid:Q55CK7 OMA:CEICSDH Uniprot:Q55CK7
Length = 544
Score = 344 (126.2 bits), Expect = 6.0e-31, P = 6.0e-31
Identities = 73/202 (36%), Positives = 108/202 (53%)
Query: 170 QKEIAGLEAQIYKLAEQVSEQRSATKDNVQRKQXXXXXXXXXXXXXXXXXTSDEDDE--- 226
+K+ E +I +L+E +S+Q +TK+NV +KQ +E+DE
Sbjct: 339 RKDNTMFEYKINRLSEYLSDQIESTKENVLKKQSRSYTEVVDGVMVGGVGDDEEEDEEVN 398
Query: 227 -------VPYNP---KNLPLGWDGKPIPYWLYKLHGLNISYTCEICGNFVYKGPKAFQRH 276
V + N P+ W GKPIPYW+Y+ L + Y CEICGN Y G KA+++H
Sbjct: 399 IDDLEVDVEVSKLKIANYPVDWSGKPIPYWVYRYLELGVEYKCEICGNQSYWGRKAYEKH 458
Query: 277 FAEWRHAHGMRCLGIPNTAHFANVTQIEDALALWEKLKAXXXXXXXXXXXXXXXXDSLGN 336
F E RH++GM +G+PNT HF +T+I+DAL LW K+K D GN
Sbjct: 459 FQETRHSYGMSSIGVPNTTHFHEITKIKDALELWSKIKNQTNQQQFKSDRDEEYEDETGN 518
Query: 337 VVNRKTYEDLKRQGW-QPEQEE 357
V+++K Y+ L +QG P Q++
Sbjct: 519 VMSKKNYDLLVKQGIINPNQKK 540
>SGD|S000002188 [details] [associations]
symbol:PRP9 "Subunit of the SF3a splicing factor complex"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA] [GO:0071004 "U2-type prespliceosome" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IDA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005686 "U2 snRNP" evidence=TAS]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR000690 InterPro:IPR003604
InterPro:IPR007087 InterPro:IPR015880 PROSITE:PS50171 SMART:SM00355
SMART:SM00451 SGD:S000002188 GO:GO:0046872 GO:GO:0008270
EMBL:BK006938 GO:GO:0003723 GO:GO:0000398 EMBL:Z71781
InterPro:IPR022755 Pfam:PF12171 GO:GO:0005686 GO:GO:0071004
eggNOG:COG5188 GeneTree:ENSGT00530000063402 KO:K12827
InterPro:IPR024598 Pfam:PF11931 PDB:4DGW PDBsum:4DGW EMBL:X53466
EMBL:Z74078 PIR:S12320 RefSeq:NP_010254.1 ProteinModelPortal:P19736
SMR:P19736 DIP:DIP-651N IntAct:P19736 MINT:MINT-506158
STRING:P19736 PaxDb:P19736 PeptideAtlas:P19736 EnsemblFungi:YDL030W
GeneID:851531 KEGG:sce:YDL030W CYGD:YDL030w HOGENOM:HOG000160935
OMA:EICGNTT OrthoDB:EOG43V34M NextBio:968923 Genevestigator:P19736
GermOnline:YDL030W Uniprot:P19736
Length = 530
Score = 291 (107.5 bits), Expect = 2.5e-27, Sum P(2) = 2.5e-27
Identities = 62/149 (41%), Positives = 88/149 (59%)
Query: 233 NLPLGWDGKPIPYWLYKLHGLNISYTCEICGNFVYKGPKAFQRHFAEWRHAHGMRCLGIP 292
++PLG DG P+PYWLYKLHGL+ Y CEIC N VY G + F+RHF E RH + +RCLGI
Sbjct: 397 DMPLGPDGLPMPYWLYKLHGLDREYRCEICSNKVYNGRRTFERHFNEERHIYHLRCLGIE 456
Query: 293 NTAHFANVTQIEDALALWEKLKAXXXXXXXXXXXXXXXXDSLGNVVNRKTYEDLKRQGWQ 352
++ F +T+I++A LW+ ++ S+ V + LK
Sbjct: 457 PSSVFKGITKIKEAQELWKNMQGQSQLT------------SIAAVPPKPNPSQLKVP--- 501
Query: 353 PEQEEEFEDSLGNVVNRKTYEDLKRQGLL 381
E E E ED GNV+++K Y++LK+QGL+
Sbjct: 502 TELELEEEDEEGNVMSKKVYDELKKQGLV 530
Score = 42 (19.8 bits), Expect = 2.5e-27, Sum P(2) = 2.5e-27
Identities = 7/40 (17%), Positives = 23/40 (57%)
Query: 32 LKSKQQERQKEIAGLEAQIYKLAEQVSEQRSATKDNVQRK 71
+ K + +++ E ++++ + ++++ S T+ V+RK
Sbjct: 303 IHKKNESKRRNFVYSEYKLHRYLKYLNDEFSRTRSFVERK 342
Score = 42 (19.8 bits), Expect = 2.5e-27, Sum P(2) = 2.5e-27
Identities = 7/40 (17%), Positives = 23/40 (57%)
Query: 162 LKSKQQERQKEIAGLEAQIYKLAEQVSEQRSATKDNVQRK 201
+ K + +++ E ++++ + ++++ S T+ V+RK
Sbjct: 303 IHKKNESKRRNFVYSEYKLHRYLKYLNDEFSRTRSFVERK 342
>CGD|CAL0002401 [details] [associations]
symbol:orf19.3178 species:5476 "Candida albicans" [GO:0071004
"U2-type prespliceosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] InterPro:IPR000690 InterPro:IPR003604
InterPro:IPR007087 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50171 SMART:SM00355 SMART:SM00451 CGD:CAL0002401
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
EMBL:AACQ01000100 EMBL:AACQ01000097 InterPro:IPR022755 Pfam:PF12171
eggNOG:COG5188 KO:K12827 InterPro:IPR024598 Pfam:PF11931
RefSeq:XP_714596.1 RefSeq:XP_714727.1 STRING:Q59YK2 GeneID:3643618
GeneID:3643741 KEGG:cal:CaO19.10688 KEGG:cal:CaO19.3178
Uniprot:Q59YK2
Length = 513
Score = 302 (111.4 bits), Expect = 2.3e-26, P = 2.3e-26
Identities = 58/131 (44%), Positives = 77/131 (58%)
Query: 222 DEDDEVPYNPKNLPLGWDGKPIPYWLYKLHGLNISYTCEICGNFVYKGPKAFQRHFAEWR 281
D DD + + KNLPLG DG PIP+WLYKL L+ Y CEICGN YKG F +HF+ +
Sbjct: 381 DNDDYLDDSFKNLPLGPDGTPIPFWLYKLQELHKQYNCEICGNISYKGKSVFMKHFSGSK 440
Query: 282 HAHGMRCLGIP--NTAHFANVTQIEDALALWEKLKAXXXXXXXXXXXXXXXXDSLGNVVN 339
H +G++CLG+ N F N+T+I++A LW+ L+ D GNV+
Sbjct: 441 HQYGLKCLGVDEKNMKMFKNITKIDEATELWKVLRKETKLKVTELENSVEVEDKEGNVML 500
Query: 340 RKTYEDLKRQG 350
K Y DLK+QG
Sbjct: 501 EKDYIDLKKQG 511
>ZFIN|ZDB-GENE-050417-270 [details] [associations]
symbol:zgc:112095 "zgc:112095" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] ZFIN:ZDB-GENE-050417-270 GeneTree:ENSGT00530000063402
InterPro:IPR024974 Pfam:PF13019 EMBL:BX649315 IPI:IPI00508258
Ensembl:ENSDART00000043774 ArrayExpress:F1R058 Uniprot:F1R058
Length = 487
Score = 133 (51.9 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 51/144 (35%), Positives = 71/144 (49%)
Query: 34 SKQQERQKEIAGLEAQIYKLAEQVSEQRSATKDNVQRKQXXXXXXXXXXXXXXXXXTSDE 93
S + ++E+ ++ K+AE+V + T + VQ+K +S
Sbjct: 359 SPAEHSEEEVQQTAERVEKMAEEVQK----TAEEVQKK--------TEESTAEISPSSSI 406
Query: 94 DDEKEAGSVLTHVGAHLDLSAFSSWEELASLGLDRLK------------TLEERAQRLFS 141
+EK VL+ V LDL + S E+L +LGL+RLK TL+ERA RLFS
Sbjct: 407 PEEKS--QVLSQVEDPLDLLSVSGPEQLEALGLERLKKELMERGMKCGGTLQERAARLFS 464
Query: 142 TKGKTA--LDPSLLAKSKPDKGLK 163
KG T +DPSLLAK P KG K
Sbjct: 465 VKGLTPDQIDPSLLAK--PSKGKK 486
>MGI|MGI:2384788 [details] [associations]
symbol:Sde2 "SDE2 telomere maintenance homolog (S. pombe)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] MGI:MGI:2384788
GeneTree:ENSGT00530000063402 EMBL:BC031781 EMBL:AK078485
IPI:IPI00169771 RefSeq:NP_666055.1 UniGene:Mm.272625
ProteinModelPortal:Q8K1J5 IntAct:Q8K1J5 PhosphoSite:Q8K1J5
PRIDE:Q8K1J5 Ensembl:ENSMUST00000038091 GeneID:208768
KEGG:mmu:208768 UCSC:uc007dwt.1 CTD:163859 eggNOG:NOG292496
HOGENOM:HOG000013081 HOVERGEN:HBG107551 InParanoid:Q8K1J5
OMA:KRKCFWM OrthoDB:EOG4QJRNT NextBio:372411 Bgee:Q8K1J5
CleanEx:MM_BC031781 Genevestigator:Q8K1J5 InterPro:IPR024974
Pfam:PF13019 Uniprot:Q8K1J5
Length = 448
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 36/68 (52%), Positives = 42/68 (61%)
Query: 110 LDLSAFSSWEELASLGLDRLK------------TLEERAQRLFSTKG--KTALDPSLLAK 155
+DLSAFSS EL SLGL+RLK TL+ERA RLFS +G K +DP+L AK
Sbjct: 382 VDLSAFSSAAELESLGLERLKCELMVLGLKCGGTLQERAARLFSVRGLTKELIDPALFAK 441
Query: 156 SKPDKGLK 163
P KG K
Sbjct: 442 --PSKGKK 447
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.129 0.368 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 381 331 0.00090 116 3 11 23 0.49 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 21
No. of states in DFA: 619 (66 KB)
Total size of DFA: 222 KB (2120 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 32.64u 0.09s 32.73t Elapsed: 00:00:13
Total cpu time: 32.64u 0.09s 32.73t Elapsed: 00:00:18
Start: Thu Aug 15 12:14:23 2013 End: Thu Aug 15 12:14:41 2013