Query psy7417
Match_columns 372
No_of_seqs 198 out of 341
Neff 3.6
Searched_HMMs 29240
Date Fri Aug 16 17:44:51 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7417.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7417hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ytz_T Troponin T; muscle, THI 100.0 1.1E-29 3.7E-34 213.6 9.3 93 119-222 1-94 (107)
2 1j1e_C Troponin I, TNI; THIN f 100.0 2.2E-29 7.6E-34 227.8 7.4 138 132-307 22-162 (180)
3 1j1d_B Troponin T, TNT; THIN f 99.9 2.5E-29 8.4E-34 211.1 3.0 90 131-222 3-94 (106)
4 1j1d_C Troponin I, TNI; THIN f 99.9 1.6E-27 5.5E-32 207.0 9.2 93 132-225 22-114 (133)
5 1ytz_I Troponin I; muscle, THI 99.9 7.2E-28 2.5E-32 218.2 7.1 125 132-283 20-147 (182)
6 2z5h_T TNT, troponin T, fast s 99.4 5.2E-16 1.8E-20 117.0 -8.0 51 8-62 5-55 (55)
7 1a2x_B Troponin I; muscle cont 84.4 0.29 9.8E-06 35.8 0.9 29 131-159 19-47 (47)
8 3hnw_A Uncharacterized protein 47.2 8 0.00027 33.3 1.9 103 107-214 3-114 (138)
9 3qh9_A Liprin-beta-2; coiled-c 23.8 35 0.0012 27.5 1.9 33 183-215 3-38 (81)
10 1nlw_A MAD protein, MAX dimeri 20.0 2.2E+02 0.0074 22.0 5.7 57 156-215 23-80 (80)
No 1
>1ytz_T Troponin T; muscle, THIN filament, actin binding, calcium, contractIle protein; HET: DR6; 3.00A {Gallus gallus} SCOP: h.1.25.1 PDB: 1yv0_T 2w49_1 2w4u_1
Probab=99.96 E-value=1.1e-29 Score=213.59 Aligned_cols=93 Identities=31% Similarity=0.510 Sum_probs=83.8
Q ss_pred CCCCceeeccCCcchhhHHHHhhhhhHHHHHH-HHHhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHhhhhhcccHHHH
Q psy7417 119 KGPNFTIQRREPGLTLSTAQLERNKTKEQIEE-EKKIALNIRIKPLNVEGWSIHKLQAKATELWETIVKLETDKYDLEER 197 (372)
Q Consensus 119 ~g~nf~i~kk~~gg~LqkAk~e~~keKeQ~ee-EKkkiLaER~kPLnIdgLsed~LrEkaKELh~rI~kLEeEKYDLE~K 197 (372)
||+|| ||||+++++ ..+++|+++ +|++||++|||||||||||+++|+++|++||+||++||++||||+.+
T Consensus 1 m~~~~-------g~~~~k~e~--~~~k~q~e~EeKkkiLaER~~pL~id~l~~~~L~e~~keLh~~I~~lEeEKYDlE~k 71 (107)
T 1ytz_T 1 MGASY-------SSYLAKADQ--KRGKKQTARETKKKVLAERRKPLNIDHLNEDKLRDKAKELWDWLYQLQTEKYDFAEQ 71 (107)
T ss_dssp ---CC-------TTHHHHHHH--HHHHHHHHHHHHHHHHHHTCCCCCCSSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcch-------hhHHHHHHh--cccHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 57899 899988755 456899885 69999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHHHHHHhhccCCCCCC
Q psy7417 198 QKRQDYDVSKIIINKKIMPSPGQGR 222 (372)
Q Consensus 198 vkrQkYEI~eL~~RV~DL~R~Ka~k 222 (372)
|++|+|||++|++||+|| |||.+
T Consensus 72 v~kq~yEI~eL~~rV~dl--gKfkK 94 (107)
T 1ytz_T 72 IKRKKYEIVTLRNRIDQA--QKHSK 94 (107)
T ss_dssp HHHHHHHHHHHHHHHHHT--CCCC-
T ss_pred HHhhhhHHHHHHHHHHHh--cCccC
Confidence 999999999999999999 99886
No 2
>1j1e_C Troponin I, TNI; THIN filament, muscle regulation, Ca2+ binding protein, EF- hand, coiled-coil, contractIle protein; 3.30A {Homo sapiens} SCOP: h.1.25.2
Probab=99.95 E-value=2.2e-29 Score=227.80 Aligned_cols=138 Identities=20% Similarity=0.297 Sum_probs=92.5
Q ss_pred chhhHHHHhhhhhHHHHHHHHHhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHhhhhhcccHHHHhhhhhhhHHHHHHH
Q psy7417 132 LTLSTAQLERNKTKEQIEEEKKIALNIRIKPLNVEGWSIHKLQAKATELWETIVKLETDKYDLEERQKRQDYDVSKIIIN 211 (372)
Q Consensus 132 g~LqkAk~e~~keKeQ~eeEKkkiLaER~kPLnIdgLsed~LrEkaKELh~rI~kLEeEKYDLE~KvkrQkYEI~eL~~R 211 (372)
.+|++|..++..++++.+++|++||++|||||||||||.++|+++|++||+||++||+++|||+++|.+|+|||++|++|
T Consensus 22 lll~kA~e~L~~E~e~k~eEKkkiLaER~kPLnid~Lse~~L~e~ckELh~~I~~LEeEKYDlE~kvkkqdyEI~dL~~r 101 (180)
T 1j1e_C 22 LLLQIAKQELEREAEERRGEKGRALSTRAQPLELAGLGFAELQDLARQLHARVDKVDEERYDIEAKVTKNITEIADLTQK 101 (180)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchhHHHHHHH
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCCCCCCCCCCcccchhhhhhCCCCCccchhhhccccccC---CChhhhhhhhhcchhhhhHHHHHHHH
Q psy7417 212 KKIMPSPGQGRPGFNPRYVQTPNLFNNATALTGKYPPKIQVASKYERRVDT---RSYDDKKKLFEGGYLSLTKESLEKQY 288 (372)
Q Consensus 212 V~DL~R~Ka~kkg~dp~~~~~~~~~~~~~a~~~~~PPki~~~Skydr~~d~---rs~~drr~~fe~~~~~~~~~~~~~~~ 288 (372)
|+|| +|||.+ |.+.-||+|...+-+ -|-..-...|.++++.|.+++-+.
T Consensus 102 V~DL-rGKFkK-------------------------P~LkkV~~s~d~m~~allg~k~~~~~d~RanLK~Vkke~~e~-- 153 (180)
T 1j1e_C 102 IFDL-RGKFKR-------------------------PTLRRVRISADAMMQALLGARAKESLDLRAHLKQVKKEDTEK-- 153 (180)
T ss_dssp HHHH-C-----------------------------------CCCCHHHHHHHHHSCC-----------------------
T ss_pred HHHH-Hhcccc-------------------------cchhhhcccHHHHHHHHHHhhHhhhhhHHHhccccccccccc--
Confidence 9999 999998 888899999988764 233333568999999999987332
Q ss_pred HHHHHhhhcccccCCCCcc
Q psy7417 289 AEKVDQFGNRQKTKLPKWF 307 (372)
Q Consensus 289 ~~k~~~f~~r~k~~~p~w~ 307 (372)
.+...|.|.
T Consensus 154 ----------~~~~~~dWr 162 (180)
T 1j1e_C 154 ----------ENREVGDWR 162 (180)
T ss_dssp -------------------
T ss_pred ----------cccccchHH
Confidence 334778886
No 3
>1j1d_B Troponin T, TNT; THIN filament, muscle regulation, Ca2+ binding protein, EF- hand, coiled-coil, contractIle protein; 2.61A {Homo sapiens} SCOP: h.1.25.1 PDB: 1j1e_B
Probab=99.95 E-value=2.5e-29 Score=211.14 Aligned_cols=90 Identities=36% Similarity=0.486 Sum_probs=68.2
Q ss_pred cchhhH-HHHhhhhhHHHHH-HHHHhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHhhhhhcccHHHHhhhhhhhHHHH
Q psy7417 131 GLTLST-AQLERNKTKEQIE-EEKKIALNIRIKPLNVEGWSIHKLQAKATELWETIVKLETDKYDLEERQKRQDYDVSKI 208 (372)
Q Consensus 131 gg~Lqk-Ak~e~~keKeQ~e-eEKkkiLaER~kPLnIdgLsed~LrEkaKELh~rI~kLEeEKYDLE~KvkrQkYEI~eL 208 (372)
||||++ |+.+++.+++|++ ++|++||++|||||||||||+++|+++|++||+||++||++||||+.+|++|+|||++|
T Consensus 3 ~g~l~~~~~~e~~~~k~q~ereeKkkiLaER~kpL~id~l~~~~L~e~~keLh~~I~~LEeEKYDlE~kv~kq~yEI~eL 82 (106)
T 1j1d_B 3 GGYIQKQAQTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQTIYNLEAEKFDLQEKFKQQKYEINVL 82 (106)
T ss_dssp -----------------CCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhhhhhHHHhcccHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhHHHHHH
Confidence 889988 3445666799988 88999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCCC
Q psy7417 209 IINKKIMPSPGQGR 222 (372)
Q Consensus 209 ~~RV~DL~R~Ka~k 222 (372)
++||+|| |||++
T Consensus 83 ~~rV~dl--gKf~K 94 (106)
T 1j1d_B 83 RNRINDN--QKVSK 94 (106)
T ss_dssp HHHHHTC-------
T ss_pred HHHHHHh--cCccC
Confidence 9999999 88886
No 4
>1j1d_C Troponin I, TNI; THIN filament, muscle regulation, Ca2+ binding protein, EF- hand, coiled-coil, contractIle protein; 2.61A {Homo sapiens} SCOP: h.1.25.2
Probab=99.94 E-value=1.6e-27 Score=207.00 Aligned_cols=93 Identities=25% Similarity=0.374 Sum_probs=83.4
Q ss_pred chhhHHHHhhhhhHHHHHHHHHhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHhhhhhcccHHHHhhhhhhhHHHHHHH
Q psy7417 132 LTLSTAQLERNKTKEQIEEEKKIALNIRIKPLNVEGWSIHKLQAKATELWETIVKLETDKYDLEERQKRQDYDVSKIIIN 211 (372)
Q Consensus 132 g~LqkAk~e~~keKeQ~eeEKkkiLaER~kPLnIdgLsed~LrEkaKELh~rI~kLEeEKYDLE~KvkrQkYEI~eL~~R 211 (372)
.+|++|..++.+++++.+++|++||++|||||||||||.++|+++|++||+||++||++||||+.+|++|+|||++|++|
T Consensus 22 lll~kA~e~l~kE~e~k~eeKkkiLaER~~pL~id~ls~~~L~e~~keLh~~I~~LEeEKYDlE~kvkkq~yEI~dL~~r 101 (133)
T 1j1d_C 22 LLLQIAKQELEREAEERRGEKGRALSTRAQPLELAGLGFAELQDLARQLHARVDKVDEERYDIEAKVTKNITEIADLTQK 101 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHcchHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCC
Q psy7417 212 KKIMPSPGQGRPGF 225 (372)
Q Consensus 212 V~DL~R~Ka~kkg~ 225 (372)
|+|| +|||.+..|
T Consensus 102 V~Dl-~gKfkKP~L 114 (133)
T 1j1d_C 102 IFDL-RGKFKRPTL 114 (133)
T ss_dssp HHHH-C--------
T ss_pred HHHH-HcccCCCcc
Confidence 9999 999988444
No 5
>1ytz_I Troponin I; muscle, THIN filament, actin binding, calcium, contractIle protein; HET: DR6; 3.00A {Gallus gallus} SCOP: h.1.25.2 PDB: 2w49_2 2w4u_2 1yv0_I 1vdi_A 1vdj_A
Probab=99.94 E-value=7.2e-28 Score=218.22 Aligned_cols=125 Identities=19% Similarity=0.210 Sum_probs=105.5
Q ss_pred chhhHHHHhhhhhHHHHHHHHHhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHhhhhhcccHHHHhhhhhhhHHHHHHH
Q psy7417 132 LTLSTAQLERNKTKEQIEEEKKIALNIRIKPLNVEGWSIHKLQAKATELWETIVKLETDKYDLEERQKRQDYDVSKIIIN 211 (372)
Q Consensus 132 g~LqkAk~e~~keKeQ~eeEKkkiLaER~kPLnIdgLsed~LrEkaKELh~rI~kLEeEKYDLE~KvkrQkYEI~eL~~R 211 (372)
.+|++|..++..+.++.+++|++||++||||||||| |.++|+++|++||+||++||+++|||+++|.+|+|||++|+++
T Consensus 20 lll~kA~e~L~~E~e~k~eeKkkiLaER~kPLnid~-se~~L~e~ckELh~~I~~LEeEKYDlE~kvkkq~yEI~dL~~r 98 (182)
T 1ytz_I 20 AMLQLAVTEIEKEAAAKEVEKQNYLAEHSPPLSLPG-SMQELQELSKKLHAKIDSVDEERYDTEVKLQKTNKELEDLSQK 98 (182)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCC-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHHHHH
Confidence 588999999999899999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCCCCCCCCCCcccchhhhhhCCCCCccchhhhccccccC---CChhhhhhhhhcchhhhhHHH
Q psy7417 212 KKIMPSPGQGRPGFNPRYVQTPNLFNNATALTGKYPPKIQVASKYERRVDT---RSYDDKKKLFEGGYLSLTKES 283 (372)
Q Consensus 212 V~DL~R~Ka~kkg~dp~~~~~~~~~~~~~a~~~~~PPki~~~Skydr~~d~---rs~~drr~~fe~~~~~~~~~~ 283 (372)
|+|| +|||.+ |.+.-||+|...+-+ -|-.--...|.++++.|.+++
T Consensus 99 VnDL-rGKfkK-------------------------P~LkkV~~sad~m~kallg~k~k~~~d~RanLK~Vkke~ 147 (182)
T 1ytz_I 99 LFDL-RGKFKR-------------------------PPLRRVRMSADAMLRALLGSKHKVNMDLRANLKQVKKED 147 (182)
T ss_dssp TGGG-TCSCSS-------------------------CSSCCCCCCHHHHHHHHHTTCCCCCCSSCCCCCCC----
T ss_pred HHHH-Hhhhcc-------------------------cchhhccccHhHHHHHHhCCCchhhhhHHHhccccccch
Confidence 9999 899998 666667777554322 111111347999999999987
No 6
>2z5h_T TNT, troponin T, fast skeletal muscle isoforms; coiled coil, actin, tropomyosin, cytoskeleton, cardiomyopathy, four-helix bundle; 2.89A {Gallus gallus}
Probab=99.42 E-value=5.2e-16 Score=116.99 Aligned_cols=51 Identities=39% Similarity=0.371 Sum_probs=33.1
Q ss_pred CCChhHhhhHHHhhhhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhHH
Q psy7417 8 GGDPEFVKRQEAKSSALDEQLKEYIVEWRNQRAKEEEDLKRLKEKQAKRKVMRAE 62 (372)
Q Consensus 8 ~g~~~~~KR~EKdl~el~~~Lq~lIe~hfeqRkKEEEEL~~LKeRiEkRRaERaE 62 (372)
+=|+.++|||+|||.+ ||+||+.||++|+|+|+||++|+.|||+||++|||
T Consensus 5 dfdd~~rKR~eKDl~E----Lq~LI~~HF~qRkkeEeeL~~L~~riE~Rr~eRaE 55 (55)
T 2z5h_T 5 DFDDIQKKRQNKDLIE----LQALIDSHFEARRKEEEELVALKERIEKRRAERAE 55 (55)
T ss_dssp ----CCSSTTTTHHHH----TTTTTTTSSSSSSSTTTSTTTC-------------
T ss_pred cHHHHHhccccccHHH----HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhcC
Confidence 3467889999999999 79999999999999999999999999999999986
No 7
>1a2x_B Troponin I; muscle contraction regulation, complex (skeletal muscle/muscle protein); 2.30A {Oryctolagus cuniculus} SCOP: j.22.1.1
Probab=84.40 E-value=0.29 Score=35.81 Aligned_cols=29 Identities=28% Similarity=0.226 Sum_probs=13.4
Q ss_pred cchhhHHHHhhhhhHHHHHHHHHhhhhcc
Q psy7417 131 GLTLSTAQLERNKTKEQIEEEKKIALNIR 159 (372)
Q Consensus 131 gg~LqkAk~e~~keKeQ~eeEKkkiLaER 159 (372)
+.||++|...+..+..+.+++|.+||++|
T Consensus 19 slmL~~A~~~Le~E~~~k~~eK~~~L~Er 47 (47)
T 1a2x_B 19 SVMLQIAATELEKEEGRREAEKQNYLAEH 47 (47)
T ss_dssp HHHHHHHHHHHHHTC--------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 46899999999999999999999999986
No 8
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=47.19 E-value=8 Score=33.28 Aligned_cols=103 Identities=16% Similarity=0.095 Sum_probs=57.4
Q ss_pred HHHHHHhhhccCCCCCceeeccCCcchhhHHHHhhhhhHHHH---------HHHHHhhhhccCCCCCCCCCCHHHHHHHH
Q psy7417 107 MMAALKEQTNKSKGPNFTIQRREPGLTLSTAQLERNKTKEQI---------EEEKKIALNIRIKPLNVEGWSIHKLQAKA 177 (372)
Q Consensus 107 m~~a~k~~~~~~~g~nf~i~kk~~gg~LqkAk~e~~keKeQ~---------eeEKkkiLaER~kPLnIdgLsed~LrEka 177 (372)
||+....-.....|..|+|.-.++-.+|..+..-+...-.+. -..+-.+|+ .|||.+ .--+++..+
T Consensus 3 ~Ms~k~~V~V~I~Gk~Y~i~g~e~ee~L~~vA~~vd~km~ei~~~~~~~~l~~~r~aVLa----ALNiad-El~k~~~~~ 77 (138)
T 3hnw_A 3 AMSSKNTAEVILGGKVIKLGGYESEEYLQRVASYINNKITEFNKEESYRRMSAELRTDMM----YLNIAD-DYFKAKKMA 77 (138)
T ss_dssp ------CEEEEETTEEEEECSCSCHHHHHHHHHHHHHHHHHHTTCHHHHTSCHHHHHHHH----HHHHHH-HHHHHHHHH
T ss_pred cCCCCCeeEEEECCEEEEecCCCcHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHH----HHHHHH-HHHHHHHHH
Confidence 445432222345688999965433367776654443211111 123444444 356654 344677888
Q ss_pred HHHHHHHHhhhhhcccHHHHhhhhhhhHHHHHHHHhh
Q psy7417 178 TELWETIVKLETDKYDLEERQKRQDYDVSKIIINKKI 214 (372)
Q Consensus 178 KELh~rI~kLEeEKYDLE~KvkrQkYEI~eL~~RV~D 214 (372)
..|-..|..++.+-|||-..+....-.+..+...+.+
T Consensus 78 ~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~ 114 (138)
T 3hnw_A 78 DSLSLDIENKDKEIYDLKHELIAAQIKAESSAKEIKE 114 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999887776655555444444433
No 9
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=23.84 E-value=35 Score=27.49 Aligned_cols=33 Identities=18% Similarity=0.341 Sum_probs=0.0
Q ss_pred HHHhhhhhcccHHHHhh---hhhhhHHHHHHHHhhc
Q psy7417 183 TIVKLETDKYDLEERQK---RQDYDVSKIIINKKIM 215 (372)
Q Consensus 183 rI~kLEeEKYDLE~Kvk---rQkYEI~eL~~RV~DL 215 (372)
.+..+|.+++|.+.++. ---.||++|+.||.+|
T Consensus 3 KL~~~Ekd~~~~ee~~~~~E~L~qEi~~Lr~kv~el 38 (81)
T 3qh9_A 3 KLVGMEKEQREQEEKQRKAEELLQELRHLKIKVEEL 38 (81)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHhhhhhhhHHHHhhHHHHHHHHHHHHHHHHHH
No 10
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1
Probab=20.01 E-value=2.2e+02 Score=22.04 Aligned_cols=57 Identities=14% Similarity=0.048 Sum_probs=38.1
Q ss_pred hhccCCCC-CCCCCCHHHHHHHHHHHHHHHHhhhhhcccHHHHhhhhhhhHHHHHHHHhhc
Q psy7417 156 LNIRIKPL-NVEGWSIHKLQAKATELWETIVKLETDKYDLEERQKRQDYDVSKIIINKKIM 215 (372)
Q Consensus 156 LaER~kPL-nIdgLsed~LrEkaKELh~rI~kLEeEKYDLE~KvkrQkYEI~eL~~RV~DL 215 (372)
|...+|.+ +-+-+|--.+-.+|. +.|..|...--.+........-++..|+.++.+|
T Consensus 23 Lr~~vP~~~~~~k~sk~~iL~kA~---~yI~~L~~~~~~l~~e~~~L~~e~~~L~~~L~~l 80 (80)
T 1nlw_A 23 LKGLVPLGPDSSRHTTLSLLTKAK---LHIKKLEDSDRKAVHQIDQLQREQRHLKRQLEKL 80 (80)
T ss_dssp HHHSSCCCSSSCCCTTHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHcCCCCCCCCCCHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 45666665 445556556655555 6677777777777777777777788888887764
Done!