BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7427
(151 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q64400|H32_CRILO Histone H3.2 OS=Cricetulus longicaudatus PE=2 SV=3
Length = 136
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/47 (100%), Positives = 47/47 (100%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
>sp|P84239|H3_URECA Histone H3 OS=Urechis caupo PE=1 SV=2
Length = 136
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/47 (100%), Positives = 47/47 (100%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
>sp|P84237|H3_TIGCA Histone H3 OS=Tigriopus californicus PE=3 SV=2
Length = 136
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/47 (100%), Positives = 47/47 (100%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
>sp|P84235|H3_PLADU Histone H3 OS=Platynereis dumerilii PE=3 SV=2
Length = 136
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/47 (100%), Positives = 47/47 (100%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
>sp|P02299|H3_DROME Histone H3 OS=Drosophila melanogaster GN=His3 PE=1 SV=4
Length = 136
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/47 (100%), Positives = 47/47 (100%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
>sp|P84236|H3_DROHY Histone H3 OS=Drosophila hydei GN=His3 PE=3 SV=2
Length = 136
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/47 (100%), Positives = 47/47 (100%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
>sp|P84238|H3_CHITH Histone H3 OS=Chironomus thummi thummi PE=3 SV=2
Length = 136
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/47 (100%), Positives = 47/47 (100%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
>sp|Q28D37|H32_XENTR Histone H3.2 OS=Xenopus tropicalis GN=TGas081o10.1 PE=2 SV=3
Length = 136
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/47 (100%), Positives = 47/47 (100%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
>sp|P84233|H32_XENLA Histone H3.2 OS=Xenopus laevis PE=1 SV=2
Length = 136
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/47 (100%), Positives = 47/47 (100%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
>sp|P84232|H32_PORAF Histone H3.2 OS=Poroderma africanum PE=1 SV=2
Length = 136
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/47 (100%), Positives = 47/47 (100%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
>sp|P84234|H32_ONCMY Histone H3.2 OS=Oncorhynchus mykiss PE=1 SV=2
Length = 136
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/47 (100%), Positives = 47/47 (100%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
>sp|Q6LBE8|H32_MUSPA Histone H3.2 OS=Mus pahari GN=H312 PE=2 SV=3
Length = 136
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/47 (100%), Positives = 47/47 (100%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
>sp|P84228|H32_MOUSE Histone H3.2 OS=Mus musculus GN=Hist1h3b PE=1 SV=2
Length = 136
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/47 (100%), Positives = 47/47 (100%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
>sp|P84231|H32_ICTBU Histone H3.2 OS=Ictiobus bubalus PE=1 SV=2
Length = 136
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/47 (100%), Positives = 47/47 (100%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
>sp|Q71DI3|H32_HUMAN Histone H3.2 OS=Homo sapiens GN=HIST2H3A PE=1 SV=3
Length = 136
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/47 (100%), Positives = 47/47 (100%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
>sp|Q4QRF4|H32_DANRE Histone H3.2 OS=Danio rerio GN=zgc:113984 PE=2 SV=3
Length = 136
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/47 (100%), Positives = 47/47 (100%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
>sp|P84229|H32_CHICK Histone H3.2 OS=Gallus gallus GN=H3-I PE=1 SV=2
Length = 136
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/47 (100%), Positives = 47/47 (100%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
>sp|P84230|H32_CAIMO Histone H3.2 OS=Cairina moschata PE=2 SV=2
Length = 136
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/47 (100%), Positives = 47/47 (100%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
>sp|P84227|H32_BOVIN Histone H3.2 OS=Bos taurus PE=1 SV=2
Length = 136
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/47 (100%), Positives = 47/47 (100%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
>sp|P22843|H3_ACRFO Histone H3 OS=Acropora formosa PE=3 SV=2
Length = 136
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 46/47 (97%), Positives = 47/47 (100%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKTDLRFQSSAV+ALQEASEAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTDLRFQSSAVLALQEASEAYLVGLFEDTNLCAIHAKR 117
>sp|P06902|H3C_CAIMO Histone H3.3C OS=Cairina moschata GN=H3F3C PE=3 SV=2
Length = 136
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 47/47 (100%), Positives = 47/47 (100%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
>sp|P69079|H3_STRDR Histone H3, embryonic OS=Strongylocentrotus droebachiensis PE=2
SV=2
Length = 136
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 46/47 (97%), Positives = 47/47 (100%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKT+LRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTELRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
>sp|P69078|H3_SOLST Histone H3, embryonic OS=Solaster stimpsoni PE=2 SV=2
Length = 136
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 46/47 (97%), Positives = 47/47 (100%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKT+LRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTELRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
>sp|P69077|H3_PYCHE Histone H3, embryonic OS=Pycnopodia helianthoides PE=2 SV=2
Length = 136
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 46/47 (97%), Positives = 47/47 (100%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKT+LRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTELRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
>sp|P69076|H3_PSAMI Histone H3, embryonic OS=Psammechinus miliaris PE=2 SV=2
Length = 136
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 46/47 (97%), Positives = 47/47 (100%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKT+LRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTELRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
>sp|P69075|H3_PISOC Histone H3, embryonic OS=Pisaster ochraceus PE=2 SV=2
Length = 136
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 46/47 (97%), Positives = 47/47 (100%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKT+LRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTELRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
>sp|P69074|H3_PISBR Histone H3, embryonic OS=Pisaster brevispinus PE=2 SV=2
Length = 136
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 46/47 (97%), Positives = 47/47 (100%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKT+LRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTELRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
>sp|P69073|H3_PARLI Histone H3, embryonic OS=Paracentrotus lividus PE=2 SV=2
Length = 136
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 46/47 (97%), Positives = 47/47 (100%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKT+LRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTELRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
>sp|P69072|H3_LYTPI Histone H3, embryonic OS=Lytechinus pictus PE=2 SV=2
Length = 136
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 46/47 (97%), Positives = 47/47 (100%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKT+LRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTELRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
>sp|P69071|H3_DERIM Histone H3, embryonic OS=Dermasterias imbricata PE=2 SV=2
Length = 136
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 46/47 (97%), Positives = 47/47 (100%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKT+LRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTELRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 117
>sp|Q6LED0|H31_RAT Histone H3.1 OS=Rattus norvegicus PE=1 SV=3
Length = 136
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/76 (68%), Positives = 56/76 (73%), Gaps = 3/76 (3%)
Query: 40 YKAGTGPERDASHRWVQTHRVTQVLS---LVREIAQDFKTDLRFQSSAVMALQEASEAYL 96
Y+ GT R+ T + + L LVREIAQDFKTDLRFQSSAVMALQEA EAYL
Sbjct: 42 YRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYL 101
Query: 97 VGLFEDTNLCAIHAKR 112
VGLFEDTNLCAIHAKR
Sbjct: 102 VGLFEDTNLCAIHAKR 117
>sp|Q6LBF0|H31_MUSPA Histone H3.1 OS=Mus pahari GN=H3110 PE=2 SV=3
Length = 136
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/76 (68%), Positives = 56/76 (73%), Gaps = 3/76 (3%)
Query: 40 YKAGTGPERDASHRWVQTHRVTQVLS---LVREIAQDFKTDLRFQSSAVMALQEASEAYL 96
Y+ GT R+ T + + L LVREIAQDFKTDLRFQSSAVMALQEA EAYL
Sbjct: 42 YRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYL 101
Query: 97 VGLFEDTNLCAIHAKR 112
VGLFEDTNLCAIHAKR
Sbjct: 102 VGLFEDTNLCAIHAKR 117
>sp|P68433|H31_MOUSE Histone H3.1 OS=Mus musculus GN=Hist1h3a PE=1 SV=2
Length = 136
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/76 (68%), Positives = 56/76 (73%), Gaps = 3/76 (3%)
Query: 40 YKAGTGPERDASHRWVQTHRVTQVLS---LVREIAQDFKTDLRFQSSAVMALQEASEAYL 96
Y+ GT R+ T + + L LVREIAQDFKTDLRFQSSAVMALQEA EAYL
Sbjct: 42 YRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYL 101
Query: 97 VGLFEDTNLCAIHAKR 112
VGLFEDTNLCAIHAKR
Sbjct: 102 VGLFEDTNLCAIHAKR 117
>sp|P68431|H31_HUMAN Histone H3.1 OS=Homo sapiens GN=HIST1H3A PE=1 SV=2
Length = 136
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/76 (68%), Positives = 56/76 (73%), Gaps = 3/76 (3%)
Query: 40 YKAGTGPERDASHRWVQTHRVTQVLS---LVREIAQDFKTDLRFQSSAVMALQEASEAYL 96
Y+ GT R+ T + + L LVREIAQDFKTDLRFQSSAVMALQEA EAYL
Sbjct: 42 YRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYL 101
Query: 97 VGLFEDTNLCAIHAKR 112
VGLFEDTNLCAIHAKR
Sbjct: 102 VGLFEDTNLCAIHAKR 117
>sp|P68432|H31_BOVIN Histone H3.1 OS=Bos taurus PE=1 SV=2
Length = 136
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/76 (68%), Positives = 56/76 (73%), Gaps = 3/76 (3%)
Query: 40 YKAGTGPERDASHRWVQTHRVTQVLS---LVREIAQDFKTDLRFQSSAVMALQEASEAYL 96
Y+ GT R+ T + + L LVREIAQDFKTDLRFQSSAVMALQEA EAYL
Sbjct: 42 YRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYL 101
Query: 97 VGLFEDTNLCAIHAKR 112
VGLFEDTNLCAIHAKR
Sbjct: 102 VGLFEDTNLCAIHAKR 117
>sp|P08898|H3_CAEEL Histone H3 OS=Caenorhabditis elegans GN=his-2 PE=1 SV=4
Length = 136
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 46/47 (97%), Positives = 46/47 (97%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKTDLRFQSSAVMALQEA EAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKR 117
>sp|Q42681|H31_CHLRE Histone H3 type 1 OS=Chlamydomonas reinhardtii GN=ch3-I PE=1 SV=1
Length = 135
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/76 (67%), Positives = 56/76 (73%), Gaps = 3/76 (3%)
Query: 40 YKAGTGPERDASHRWVQTHRVTQVLS---LVREIAQDFKTDLRFQSSAVMALQEASEAYL 96
Y+ GT R+ T V + L LVREIAQDFKTDLRFQS AV+ALQEA+EAYL
Sbjct: 41 YRPGTVALREIRKYQKSTELVIRKLPFQRLVREIAQDFKTDLRFQSQAVLALQEAAEAYL 100
Query: 97 VGLFEDTNLCAIHAKR 112
VGLFEDTNLCAIHAKR
Sbjct: 101 VGLFEDTNLCAIHAKR 116
>sp|Q5MYA4|H32_CICIN Histone H3.2 OS=Cichorium intybus PE=2 SV=3
Length = 136
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/47 (97%), Positives = 46/47 (97%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKTDLRFQSSAV ALQEASEAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKR 117
>sp|Q76MV0|H32_TOBAC Histone H3.2 OS=Nicotiana tabacum GN=B34 PE=1 SV=1
Length = 136
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/47 (95%), Positives = 46/47 (97%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKTDLRFQSSAV ALQEA+EAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKR 117
>sp|P69248|H32_PETCR Histone H3.2 OS=Petroselinum crispum GN=H3-7 PE=3 SV=2
Length = 136
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/47 (95%), Positives = 46/47 (97%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKTDLRFQSSAV ALQEA+EAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKR 117
>sp|Q2RAD9|H32_ORYSJ Histone H3.2 OS=Oryza sativa subsp. japonica GN=Os01g0866200 PE=2
SV=1
Length = 136
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/47 (95%), Positives = 46/47 (97%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKTDLRFQSSAV ALQEA+EAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKR 117
>sp|A2Y533|H32_ORYSI Histone H3.2 OS=Oryza sativa subsp. indica GN=OsI_019426 PE=2 SV=1
Length = 136
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/47 (95%), Positives = 46/47 (97%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKTDLRFQSSAV ALQEA+EAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKR 117
>sp|P69246|H32_MAIZE Histone H3.2 OS=Zea mays GN=H3C2 PE=1 SV=2
Length = 136
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/47 (95%), Positives = 46/47 (97%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKTDLRFQSSAV ALQEA+EAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKR 117
>sp|Q71T45|H32_EUPES Histone H3.2 OS=Euphorbia esula GN=H3 PE=2 SV=3
Length = 136
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/47 (95%), Positives = 46/47 (97%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKTDLRFQSSAV ALQEA+EAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKR 117
>sp|Q6LCK1|H32_BRANA Histone H3.2 OS=Brassica napus PE=2 SV=3
Length = 136
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/47 (95%), Positives = 46/47 (97%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKTDLRFQSSAV ALQEA+EAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKR 117
>sp|Q6LBE3|H32_ASPOF Histone H3.2 OS=Asparagus officinalis PE=2 SV=3
Length = 136
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/47 (95%), Positives = 46/47 (97%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKTDLRFQSSAV ALQEA+EAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKR 117
>sp|P59226|H32_ARATH Histone H3.2 OS=Arabidopsis thaliana GN=HTR2 PE=1 SV=2
Length = 136
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/47 (95%), Positives = 46/47 (97%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKTDLRFQSSAV ALQEA+EAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKR 117
>sp|Q9FKQ3|H3L5_ARATH Histone H3-like 5 OS=Arabidopsis thaliana GN=At5g65350 PE=2 SV=3
Length = 139
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/47 (95%), Positives = 46/47 (97%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKTDLRFQSSAV ALQEA+EAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKR 117
>sp|P08903|H32_ENCAL Histone H3.2 OS=Encephalartos altensteinii PE=1 SV=2
Length = 136
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/47 (95%), Positives = 46/47 (97%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKTDLRFQSSAV ALQEA+EAYLVGLFEDTNLCAIHAKR
Sbjct: 71 LVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKR 117
>sp|P08437|H3_VOLCA Histone H3 OS=Volvox carteri GN=H3-I PE=3 SV=2
Length = 135
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/47 (93%), Positives = 46/47 (97%)
Query: 66 LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
LVREIAQDFKTDLRFQS AV+ALQEA+EAYLVGLFEDTNLCAIHAKR
Sbjct: 70 LVREIAQDFKTDLRFQSQAVLALQEAAEAYLVGLFEDTNLCAIHAKR 116
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.126 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,514,656
Number of Sequences: 539616
Number of extensions: 1734836
Number of successful extensions: 3775
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 3576
Number of HSP's gapped (non-prelim): 201
length of query: 151
length of database: 191,569,459
effective HSP length: 107
effective length of query: 44
effective length of database: 133,830,547
effective search space: 5888544068
effective search space used: 5888544068
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)