RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy7427
         (151 letters)



>d1tzyc_ a.22.1.1 (C:) Histone H3 {Chicken (Gallus gallus),
           erythrocytes [TaxId: 9031]}
          Length = 95

 Score = 83.3 bits (206), Expect = 2e-22
 Identities = 47/47 (100%), Positives = 47/47 (100%)

Query: 66  LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
           LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR
Sbjct: 30  LVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 76


>d1f1ea_ a.22.1.2 (A:) Archaeal histone {Archaeon Methanopyrus
           kandleri [TaxId: 2320]}
          Length = 151

 Score = 36.7 bits (85), Expect = 3e-04
 Identities = 11/46 (23%), Positives = 13/46 (28%), Gaps = 1/46 (2%)

Query: 67  VREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 112
           VR I +      R  S AV    +        L E     A    R
Sbjct: 85  VRRILKR-AGIERASSDAVDLYNKLICRATEELGEKAAEYADEDGR 129


>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress
           (Arabidopsis thaliana) [TaxId: 3702]}
          Length = 349

 Score = 26.8 bits (58), Expect = 0.98
 Identities = 9/35 (25%), Positives = 15/35 (42%)

Query: 2   SPHVHVAYTHNTCTRSTRDDYRSHSHRDIVKKNRE 36
            P   V +  +T    +   Y+S  HR +V K + 
Sbjct: 262 VPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKV 296


>d1vjpa1 c.2.1.3 (A:0-209,A:317-381) Hypothetical protein TM1419
           {Thermotoga maritima [TaxId: 2336]}
          Length = 275

 Score = 24.2 bits (52), Expect = 9.1
 Identities = 8/53 (15%), Positives = 19/53 (35%)

Query: 67  VREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRGYDASAS 119
           ++E       +       V+     +EA++    ++  L AI        +A+
Sbjct: 109 LKEAVDTLVKEWTELDPDVIVNTCTTEAFVPFGNKEDLLKAIENNDKERLTAT 161


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.317    0.126    0.369 

Gapped
Lambda     K      H
   0.267   0.0570    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 507,176
Number of extensions: 19284
Number of successful extensions: 37
Number of sequences better than 10.0: 1
Number of HSP's gapped: 37
Number of HSP's successfully gapped: 7
Length of query: 151
Length of database: 2,407,596
Length adjustment: 78
Effective length of query: 73
Effective length of database: 1,336,656
Effective search space: 97575888
Effective search space used: 97575888
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 49 (23.0 bits)