Your job contains 1 sequence.
>psy7429
MTIFGPPRTAAMHVLFPSLTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKL
TVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGG
VDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEY
FPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVR
NEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLC
ISILLSLTVFFLLLAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTH
VMKPWVHKVFIEVLPKILFIQRPAKDNDDDLDKPPDGVLTEVFDVPDYVDYGGRYQTDFD
IPSLPPSRYDVSNTGSTVVPCYGDPLPISNLEADDIMFSPTSMCPPTQDGTDVSPTFDNQ
MILMPRPLTWRLPYELPSKLARLASIHFCDLLTPINFLQEWEDYKLKWSPEEYGGVDTLH
VPSEHIWLPDIVLYN
The BLAST search returned 12 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy7429
(555 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0000036 - symbol:nAcRalpha-96Aa "nicotinic Acetylc... 1587 5.0e-163 1
FB|FBgn0000039 - symbol:nAcRalpha-96Ab "nicotinic Acetylc... 1276 4.5e-130 1
FB|FBgn0015519 - symbol:nAcRalpha-7E "nicotinic Acetylcho... 1275 5.7e-130 1
FB|FBgn0037212 - symbol:nAcRalpha-80B "nicotinic Acetylch... 1253 1.2e-127 1
FB|FBgn0004118 - symbol:nAcRbeta-96A "nicotinic Acetylcho... 1214 1.7e-123 1
WB|WBGene00006797 - symbol:unc-63 species:6239 "Caenorhab... 572 1.0e-111 2
WB|WBGene00006774 - symbol:unc-38 species:6239 "Caenorhab... 998 1.3e-100 1
RGD|2346 - symbol:Chrna4 "cholinergic receptor, nicotinic... 923 3.0e-95 2
UNIPROTKB|P09483 - symbol:Chrna4 "Neuronal acetylcholine ... 923 3.0e-95 2
UNIPROTKB|J3KMY9 - symbol:CHRNA2 "Neuronal acetylcholine ... 853 2.1e-92 2
UNIPROTKB|F1RGM6 - symbol:CHRNB2 "Uncharacterized protein... 909 3.5e-91 1
UNIPROTKB|F1MUN1 - symbol:CHRNB2 "Uncharacterized protein... 908 4.5e-91 1
MGI|MGI:87891 - symbol:Chrnb2 "cholinergic receptor, nico... 908 4.5e-91 1
UNIPROTKB|F1PQB1 - symbol:CHRNB2 "Uncharacterized protein... 907 5.7e-91 1
RGD|2350 - symbol:Chrnb2 "cholinergic receptor, nicotinic... 907 5.7e-91 1
UNIPROTKB|P17787 - symbol:CHRNB2 "Neuronal acetylcholine ... 903 1.5e-90 1
UNIPROTKB|Q19AE5 - symbol:CHRNB2 "Cholinergic receptor ni... 903 1.5e-90 1
ZFIN|ZDB-GENE-070821-3 - symbol:chrnb2b "cholinergic rece... 895 1.1e-89 1
UNIPROTKB|F1LQT8 - symbol:Chrna4 "Neuronal acetylcholine ... 870 1.2e-89 2
ZFIN|ZDB-GENE-041001-99 - symbol:chrna2b "cholinergic rec... 893 1.7e-89 1
UNIPROTKB|Q5IS77 - symbol:CHRNA4 "Neuronal acetylcholine ... 861 6.3e-89 2
UNIPROTKB|P43681 - symbol:CHRNA4 "Neuronal acetylcholine ... 861 8.0e-89 2
UNIPROTKB|P26153 - symbol:CHRNB4 "Neuronal acetylcholine ... 867 1.0e-88 2
UNIPROTKB|Q07263 - symbol:CHRNA3 "Neuronal acetylcholine ... 883 2.0e-88 1
RGD|2345 - symbol:Chrna3 "cholinergic receptor, nicotinic... 881 3.2e-88 1
UNIPROTKB|F1M7K6 - symbol:Chrna3 "Neuronal acetylcholine ... 881 3.2e-88 1
MGI|MGI:87887 - symbol:Chrna3 "cholinergic receptor, nico... 881 3.2e-88 1
UNIPROTKB|F1M4L2 - symbol:Chrna3 "Neuronal acetylcholine ... 881 3.2e-88 1
ZFIN|ZDB-GENE-040108-2 - symbol:chrna2a "cholinergic rece... 880 4.1e-88 1
UNIPROTKB|F1NAQ7 - symbol:CHRNB4 "Neuronal acetylcholine ... 862 4.4e-88 2
UNIPROTKB|P09482 - symbol:CHRNA4 "Neuronal acetylcholine ... 879 5.3e-88 1
UNIPROTKB|P32297 - symbol:CHRNA3 "Neuronal acetylcholine ... 879 5.3e-88 1
UNIPROTKB|F1NWX4 - symbol:CHRNB4 "Neuronal acetylcholine ... 861 5.6e-88 2
UNIPROTKB|F1P4U2 - symbol:CHRNB4 "Neuronal acetylcholine ... 861 5.6e-88 2
UNIPROTKB|F1RKU8 - symbol:CHRNA3 "Uncharacterized protein... 878 6.7e-88 1
UNIPROTKB|P09484 - symbol:CHRNB2 "Neuronal acetylcholine ... 877 8.6e-88 1
UNIPROTKB|F1N9F1 - symbol:CHRNA2 "Neuronal acetylcholine ... 875 1.4e-87 1
UNIPROTKB|F1NHP4 - symbol:CHRNA2 "Neuronal acetylcholine ... 875 1.4e-87 1
UNIPROTKB|P09480 - symbol:CHRNA2 "Neuronal acetylcholine ... 875 1.4e-87 1
UNIPROTKB|F1MYI7 - symbol:CHRNA3 "Neuronal acetylcholine ... 875 1.4e-87 1
UNIPROTKB|F1P8T5 - symbol:CHRNA3 "Uncharacterized protein... 874 1.8e-87 1
UNIPROTKB|F1P8T6 - symbol:CHRNA3 "Uncharacterized protein... 874 1.8e-87 1
UNIPROTKB|E1BJF7 - symbol:CHRNA3 "Neuronal acetylcholine ... 871 3.7e-87 1
UNIPROTKB|F1PFF3 - symbol:CHRNA4 "Uncharacterized protein... 870 4.7e-87 1
MGI|MGI:87888 - symbol:Chrna4 "cholinergic receptor, nico... 870 4.7e-87 1
UNIPROTKB|P30926 - symbol:CHRNB4 "Neuronal acetylcholine ... 865 1.6e-86 1
ZFIN|ZDB-GENE-090312-91 - symbol:chrna6 "cholinergic rece... 863 2.6e-86 1
ZFIN|ZDB-GENE-090505-3 - symbol:chrna4 "cholinergic recep... 860 5.4e-86 1
UNIPROTKB|Q19AE6 - symbol:CHRNA4 "Neuronal acetylcholine ... 856 1.4e-85 1
ZFIN|ZDB-GENE-070822-1 - symbol:chrna3 "cholinergic recep... 856 1.4e-85 1
UNIPROTKB|G1K2Z1 - symbol:CHRNA3 "Neuronal acetylcholine ... 854 2.4e-85 1
UNIPROTKB|P09481 - symbol:CHRNA3 "Neuronal acetylcholine ... 854 2.4e-85 1
UNIPROTKB|F1NWY0 - symbol:CHRNA3 "Neuronal acetylcholine ... 854 2.4e-85 1
UNIPROTKB|Q15822 - symbol:CHRNA2 "Neuronal acetylcholine ... 853 3.0e-85 1
UNIPROTKB|E1BHK0 - symbol:CHRNA4 "Uncharacterized protein... 853 3.0e-85 1
UNIPROTKB|F1RKU7 - symbol:CHRNB4 "Uncharacterized protein... 852 3.8e-85 1
RGD|621533 - symbol:Chrna2 "cholinergic receptor, nicotin... 851 4.9e-85 1
UNIPROTKB|P18845 - symbol:chrna3 "Neuronal acetylcholine ... 851 4.9e-85 1
UNIPROTKB|E2RHB4 - symbol:CHRNB4 "Uncharacterized protein... 851 4.9e-85 1
MGI|MGI:87886 - symbol:Chrna2 "cholinergic receptor, nico... 850 6.2e-85 1
UNIPROTKB|E2R3I1 - symbol:CHRNA2 "Uncharacterized protein... 850 6.2e-85 1
UNIPROTKB|F1RJS5 - symbol:CHRNA2 "Uncharacterized protein... 847 1.3e-84 1
UNIPROTKB|E2RC61 - symbol:CHRNA6 "Uncharacterized protein... 843 3.4e-84 1
UNIPROTKB|F1NA49 - symbol:CHRNB3 "Neuronal acetylcholine ... 841 5.6e-84 1
UNIPROTKB|F1NKI4 - symbol:CHRNB3 "Neuronal acetylcholine ... 841 5.6e-84 1
WB|WBGene00000051 - symbol:acr-12 species:6239 "Caenorhab... 841 5.6e-84 1
ZFIN|ZDB-GENE-090312-169 - symbol:chrnb2a "cholinergic re... 839 9.1e-84 1
MGI|MGI:106212 - symbol:Chrnb3 "cholinergic receptor, nic... 837 1.5e-83 1
UNIPROTKB|F1PN73 - symbol:CHRNB3 "Uncharacterized protein... 836 1.9e-83 1
UNIPROTKB|F1NQD3 - symbol:CHRNA6 "Neuronal acetylcholine ... 834 3.1e-83 1
ZFIN|ZDB-GENE-040108-1 - symbol:chrnb3a "cholinergic rece... 834 3.1e-83 1
RGD|621544 - symbol:Chrnb3 "cholinergic receptor, nicotin... 834 3.1e-83 1
UNIPROTKB|F1MQ06 - symbol:CHRNA6 "Uncharacterized protein... 833 3.9e-83 1
UNIPROTKB|P43679 - symbol:CHRNB3 "Neuronal acetylcholine ... 833 3.9e-83 1
RGD|69281 - symbol:Chrna6 "cholinergic receptor, nicotini... 832 5.0e-83 1
UNIPROTKB|P43143 - symbol:Chrna6 "Neuronal acetylcholine ... 832 5.0e-83 1
UNIPROTKB|I3LN85 - symbol:CHRNA6 "Uncharacterized protein... 831 6.4e-83 1
MGI|MGI:106213 - symbol:Chrna6 "cholinergic receptor, nic... 831 6.4e-83 1
UNIPROTKB|P02708 - symbol:CHRNA1 "Acetylcholine receptor ... 830 8.2e-83 1
RGD|69277 - symbol:Chrna1 "cholinergic receptor, nicotini... 829 1.0e-82 1
UNIPROTKB|Q15825 - symbol:CHRNA6 "Neuronal acetylcholine ... 827 1.7e-82 1
UNIPROTKB|E2RIZ9 - symbol:CHRNA1 "Uncharacterized protein... 827 1.7e-82 1
UNIPROTKB|Q5IS76 - symbol:CHRNA6 "Neuronal acetylcholine ... 826 2.2e-82 1
UNIPROTKB|P19370 - symbol:chrnb2 "Neuronal acetylcholine ... 825 2.8e-82 1
UNIPROTKB|F1MF30 - symbol:CHRNB3 "Uncharacterized protein... 825 2.8e-82 1
UNIPROTKB|F1NKI5 - symbol:CHRNA6 "Neuronal acetylcholine ... 822 5.8e-82 1
UNIPROTKB|P02709 - symbol:CHRNA1 "Acetylcholine receptor ... 821 7.4e-82 1
UNIPROTKB|I3LLF5 - symbol:CHRNB3 "Uncharacterized protein... 821 7.4e-82 1
UNIPROTKB|Q05901 - symbol:CHRNB3 "Neuronal acetylcholine ... 821 7.4e-82 1
UNIPROTKB|P49581 - symbol:CHRNA6 "Neuronal acetylcholine ... 820 9.4e-82 1
MGI|MGI:87885 - symbol:Chrna1 "cholinergic receptor, nico... 820 9.4e-82 1
UNIPROTKB|F1N4T3 - symbol:CHRNA2 "Uncharacterized protein... 818 1.5e-81 1
UNIPROTKB|E1BT92 - symbol:CHRNA1 "Acetylcholine receptor ... 817 2.0e-81 1
UNIPROTKB|P09479 - symbol:CHRNA1 "Acetylcholine receptor ... 817 2.0e-81 1
ZFIN|ZDB-GENE-030102-4 - symbol:chrnb3b "cholinergic rece... 816 2.5e-81 1
UNIPROTKB|F1P208 - symbol:CHRNA1 "Acetylcholine receptor ... 816 2.5e-81 1
UNIPROTKB|Q8SPU6 - symbol:CHRNB4 "Neuronal acetylcholine ... 805 3.7e-80 1
UNIPROTKB|F1NAI4 - symbol:CHRNA5 "Neuronal acetylcholine ... 804 4.7e-80 1
UNIPROTKB|F1NIT6 - symbol:CHRNA5 "Neuronal acetylcholine ... 804 4.7e-80 1
UNIPROTKB|F1NIT9 - symbol:CHRNA5 "Neuronal acetylcholine ... 804 4.7e-80 1
WARNING: Descriptions of 504 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0000036 [details] [associations]
symbol:nAcRalpha-96Aa "nicotinic Acetylcholine Receptor alpha
96Aa" species:7227 "Drosophila melanogaster" [GO:0005887 "integral
to plasma membrane" evidence=NAS] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA;ISS] [GO:0005892 "acetylcholine-gated channel complex"
evidence=ISS] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 EMBL:AE014297 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00630000089708 KO:K05312 EMBL:X07194 PIR:S00381
RefSeq:NP_524481.2 UniGene:Dm.2364 ProteinModelPortal:P09478
SMR:P09478 STRING:P09478 PRIDE:P09478 EnsemblMetazoa:FBtr0084619
GeneID:42918 KEGG:dme:Dmel_CG5610 CTD:42918 FlyBase:FBgn0000036
eggNOG:NOG290206 InParanoid:P09478 OMA:ACAGHVA OrthoDB:EOG44TMQ0
PhylomeDB:P09478 GenomeRNAi:42918 NextBio:831261 Bgee:P09478
GermOnline:CG5610 GO:GO:0005892 Uniprot:P09478
Length = 567
Score = 1587 (563.7 bits), Expect = 5.0e-163, P = 5.0e-163
Identities = 319/472 (67%), Positives = 364/472 (77%)
Query: 14 VLFPSLTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIE 73
VLF ++ + N +AKRLYDDLLSNYNRLIRPVGNNSD+LTVKMGL+LSQLI+
Sbjct: 4 VLFAAVFIALHFATGGLANPDAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLID 63
Query: 74 VNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWL 133
VNLKNQIMTTNVWV Q EW DYKLKW+P++YGGVDTLHVPSEHIWL
Sbjct: 64 VNLKNQIMTTNVWVEQ---------------EWNDYKLKWNPDDYGGVDTLHVPSEHIWL 108
Query: 134 PDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFG 193
PDIVLYNNADGNYEVTIMTKAILH+ GKVVW PPAIYKSFCEIDVEYFPFD QTC MKFG
Sbjct: 109 PDIVLYNNADGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFG 168
Query: 194 SWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYP 253
SWTYDGY VDL+H+ Q DSD I++GIDLQDYY+SVEWDIM+VPAVRNEKFYSCCEEPY
Sbjct: 169 SWTYDGYMVDLRHLKQTADSDNIEVGIDLQDYYISVEWDIMRVPAVRNEKFYSCCEEPYL 228
Query: 254 DIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXX 313
DI+FN+TLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEK+SLC
Sbjct: 229 DIVFNLTLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKISLCISILLSLTVFFLL 288
Query: 314 XAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEV 373
AEIIPPTSLTVPLLGKYLLFTM+LVTLSVVVTIAVLNVNFRSPVTH M PWV ++FI++
Sbjct: 289 LAEIIPPTSLTVPLLGKYLLFTMMLVTLSVVVTIAVLNVNFRSPVTHRMAPWVQRLFIQI 348
Query: 374 LPKILFIQRPAXXXXXXXXXXXXGVLTEVF----DVPDYVDYGG-RYQTDFDIPSLPPS- 427
LPK+L I+RP VLT+V+ DV +V+Y R+ D+ IP+LP S
Sbjct: 349 LPKLLCIERPKKEEPEEDQPPE--VLTDVYHLPPDVDKFVNYDSKRFSGDYGIPALPASH 406
Query: 428 RYDVSNTGSTVVPCYGDP-LPISNLE---ADDIMFSPTSMCPPTQDGTDVSP 475
R+D++ G C+ +P LP S+L ADD +FSP+ + +G D+SP
Sbjct: 407 RFDLAAAGGISAHCFAEPPLP-SSLPLPGADDDLFSPSGL-----NG-DISP 451
Score = 210 (79.0 bits), Expect = 8.5e-14, P = 8.5e-14
Identities = 38/67 (56%), Positives = 50/67 (74%)
Query: 491 RLPYELPSKLARLASIHFCDLLTPINFL--QEWEDYKLKWSPEEYGGVDTLHVPSEHIWL 548
RL ++ +L++L ++ + + N QEW DYKLKW+P++YGGVDTLHVPSEHIWL
Sbjct: 49 RLTVKMGLRLSQLIDVNLKNQIMTTNVWVEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWL 108
Query: 549 PDIVLYN 555
PDIVLYN
Sbjct: 109 PDIVLYN 115
>FB|FBgn0000039 [details] [associations]
symbol:nAcRalpha-96Ab "nicotinic Acetylcholine Receptor alpha
96Ab" species:7227 "Drosophila melanogaster" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISS;IDA] [GO:0005892 "acetylcholine-gated channel complex"
evidence=ISS] [GO:0005887 "integral to plasma membrane"
evidence=NAS] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 EMBL:AE014297 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00630000089708 KO:K05312 eggNOG:NOG290206
GO:GO:0005892 EMBL:X52274 EMBL:X53583 EMBL:AY058446 PIR:S11679
RefSeq:NP_524482.1 RefSeq:NP_733001.1 UniGene:Dm.2363
ProteinModelPortal:P17644 SMR:P17644 DIP:DIP-22674N IntAct:P17644
MINT:MINT-888559 STRING:P17644 PRIDE:P17644
EnsemblMetazoa:FBtr0084639 EnsemblMetazoa:FBtr0084640 GeneID:42919
KEGG:dme:Dmel_CG6844 CTD:42919 FlyBase:FBgn0000039
InParanoid:P17644 OMA:HISQKND OrthoDB:EOG4W6MB5 PhylomeDB:P17644
GenomeRNAi:42919 NextBio:831266 Bgee:P17644 GermOnline:CG6844
Uniprot:P17644
Length = 576
Score = 1276 (454.2 bits), Expect = 4.5e-130, P = 4.5e-130
Identities = 239/355 (67%), Positives = 279/355 (78%)
Query: 30 QGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQ 89
Q N +AKRLYDDLLSNYNRLIRPV NN+D + VK+GL+LSQLI++NLK+QI+TTNVW+
Sbjct: 40 QANPDAKRLYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNVWLEH 99
Query: 90 NLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVT 149
EW+D+K KW P EYGGV L+VPSEHIWLPDIVLYNNADG Y VT
Sbjct: 100 ---------------EWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVLYNNADGEYVVT 144
Query: 150 IMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQ 209
MTKAILHY GKVVW PPAI+KS CEIDV YFPFD QTC MKFGSWTYDG +DLKHI Q
Sbjct: 145 TMTKAILHYTGKVVWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGDQIDLKHISQ 204
Query: 210 GPDSD-KIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFY 268
D D K++IGIDL++YY SVEWDI+ VPA R+EK+Y CC EPYPDI FNITLRRKTLFY
Sbjct: 205 KNDKDNKVEIGIDLREYYPSVEWDILGVPAERHEKYYPCCAEPYPDIFFNITLRRKTLFY 264
Query: 269 TVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLL 328
TVNLIIPCVGIS+LSVLVFYLP+DSGEK++LC +EIIP TSL +PLL
Sbjct: 265 TVNLIIPCVGISYLSVLVFYLPADSGEKIALCISILLSQTMFFLLISEIIPSTSLALPLL 324
Query: 329 GKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
GKYLLFTM+LV LSVV+TI +LN+++R P TH M+PW+ FI+ LPK+L ++ P
Sbjct: 325 GKYLLFTMLLVGLSVVITIIILNIHYRKPSTHKMRPWIRSFFIKRLPKLLLMRVP 379
Score = 185 (70.2 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 42/101 (41%), Positives = 61/101 (60%)
Query: 463 MCPPTQDGTDVSPTFDNQMI---LMPRPL---TWRLPYELPSKLARLASIHFCD-LLTPI 515
+C Q D +D+ + + RP+ T + +L +L++L ++ D +LT
Sbjct: 35 LCETVQANPDAKRLYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTN 94
Query: 516 NFLQ-EWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+L+ EW+D+K KW P EYGGV L+VPSEHIWLPDIVLYN
Sbjct: 95 VWLEHEWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVLYN 135
>FB|FBgn0015519 [details] [associations]
symbol:nAcRalpha-7E "nicotinic Acetylcholine Receptor alpha
7E" species:7227 "Drosophila melanogaster" [GO:0005892
"acetylcholine-gated channel complex" evidence=ISS] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISS] [GO:0006811 "ion transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HSSP:P02711 GO:GO:0004889
eggNOG:NOG290206 GO:GO:0005892 OrthoDB:EOG4D2551 EMBL:Y15593
ProteinModelPortal:O18394 SMR:O18394 STRING:O18394 PaxDb:O18394
PRIDE:O18394 FlyBase:FBgn0015519 InParanoid:O18394
ArrayExpress:O18394 Bgee:O18394 Uniprot:O18394
Length = 795
Score = 1275 (453.9 bits), Expect = 5.7e-130, P = 5.7e-130
Identities = 241/363 (66%), Positives = 286/363 (78%)
Query: 22 LVFSVIIAQ-GNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQI 80
LV S I + N +AKRLYDDLLSNYN+L+RPV N +D LTV++ LKLSQLI+VNLKNQI
Sbjct: 12 LVLSFISSSTANPDAKRLYDDLLSNYNKLVRPVVNVTDALTVRIKLKLSQLIDVNLKNQI 71
Query: 81 MTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 140
MTTN+WV Q+ W DYKLKW P+EYGGV+ LHVPS+HIW PDIVLYN
Sbjct: 72 MTTNLWVEQS---------------WYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYN 116
Query: 141 NADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGY 200
NADGN+EVT+ TKA L+Y G+V W PPAIYKS CEIDVEYFPFD QTCVMKFGSWTYDG+
Sbjct: 117 NADGNFEVTLATKATLNYTGRVEWRPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGF 176
Query: 201 TVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNIT 260
VDL+HI + ++ +++G+DL ++Y SVEWDI++VPAVRNEKFY+CC+EPY DI FNIT
Sbjct: 177 QVDLRHIDELNGTNVVEVGVDLSEFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNIT 236
Query: 261 LRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPP 320
+RRKTLFYTVNLIIPC+GISFL++LVFYLPSDSGEKVSL AEIIPP
Sbjct: 237 MRRKTLFYTVNLIIPCMGISFLTILVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPP 296
Query: 321 TSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFI 380
TSL VPLLGK++LFTMIL T S+ VT+ VLN++FRSP TH M PWV VFI LP+ L +
Sbjct: 297 TSLVVPLLGKFVLFTMILDTFSICVTVLVLNIHFRSPQTHTMAPWVRTVFINQLPRFLVM 356
Query: 381 QRP 383
+RP
Sbjct: 357 RRP 359
Score = 186 (70.5 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 36/79 (45%), Positives = 50/79 (63%)
Query: 479 NQMILMPRPLTWRLPYELPSKLARLASIHFCDLLTPINFL--QEWEDYKLKWSPEEYGGV 536
N+++ +T L + KL++L ++ + + N Q W DYKLKW P+EYGGV
Sbjct: 38 NKLVRPVVNVTDALTVRIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLKWEPKEYGGV 97
Query: 537 DTLHVPSEHIWLPDIVLYN 555
+ LHVPS+HIW PDIVLYN
Sbjct: 98 EMLHVPSDHIWRPDIVLYN 116
>FB|FBgn0037212 [details] [associations]
symbol:nAcRalpha-80B "nicotinic Acetylcholine Receptor alpha
80B" species:7227 "Drosophila melanogaster" [GO:0005892
"acetylcholine-gated channel complex" evidence=ISS] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISS] [GO:0006811 "ion transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HSSP:P02711
GO:GO:0004889 FlyBase:FBgn0037212 EMBL:AJ272159
ProteinModelPortal:Q9NFR5 SMR:Q9NFR5 STRING:Q9NFR5 PRIDE:Q9NFR5
InParanoid:Q9NFR5 ArrayExpress:Q9NFR5 Bgee:Q9NFR5 Uniprot:Q9NFR5
Length = 568
Score = 1253 (446.1 bits), Expect = 1.2e-127, P = 1.2e-127
Identities = 233/353 (66%), Positives = 279/353 (79%)
Query: 31 GNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQN 90
GN +AKRLYDDLLSNYN+L+RPV N +D L V + LKLSQLI+VNLKNQIMTTN+WV Q+
Sbjct: 37 GNPDAKRLYDDLLSNYNKLVRPVVNTTDVLKVCIKLKLSQLIDVNLKNQIMTTNLWVEQS 96
Query: 91 LKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTI 150
W DYKL+W P+EYGGV LHVPS+HIW PDIVLYNNADGN+EVT+
Sbjct: 97 ---------------WYDYKLRWEPKEYGGVHMLHVPSDHIWRPDIVLYNNADGNFEVTL 141
Query: 151 MTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQG 210
TKA ++ +G V W PPAIYKS CEIDVEYFPFD QTCV+KFGSWTYDG+ VDL+H+ +
Sbjct: 142 ATKATIYSEGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGFKVDLRHMDEQ 201
Query: 211 PDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTV 270
S+ + +G+DL ++Y+SVEWDI++VPAVRNEKFY+CC+EPY DI FNIT+RRKTLFYTV
Sbjct: 202 QGSNVVAVGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTV 261
Query: 271 NLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGK 330
N+IIPC+GISFL+VL FYLPSDSGEKV+L EIIPPTSL VPLLGK
Sbjct: 262 NIIIPCMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGK 321
Query: 331 YLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
YL+F MILV++S+ VT+ VLNV+FRSP TH M PWV +VFI+ LP LFI+RP
Sbjct: 322 YLIFAMILVSISICVTVVVLNVHFRSPQTHKMAPWVKRVFIDFLPAFLFIKRP 374
Score = 177 (67.4 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 32/59 (54%), Positives = 41/59 (69%)
Query: 499 KLARLASIHFCDLLTPINFL--QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
KL++L ++ + + N Q W DYKL+W P+EYGGV LHVPS+HIW PDIVLYN
Sbjct: 73 KLSQLIDVNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWRPDIVLYN 131
>FB|FBgn0004118 [details] [associations]
symbol:nAcRbeta-96A "nicotinic Acetylcholine Receptor beta
96A" species:7227 "Drosophila melanogaster" [GO:0005892
"acetylcholine-gated channel complex" evidence=ISS] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISS] [GO:0005887 "integral to plasma membrane"
evidence=NAS] [GO:0006811 "ion transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 EMBL:AE014297 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00630000089708 eggNOG:NOG290206 GO:GO:0005892
EMBL:X55676 EMBL:Y14678 EMBL:AY089498 PIR:S12899 RefSeq:NP_524483.1
RefSeq:NP_733002.1 UniGene:Dm.4978 ProteinModelPortal:P25162
SMR:P25162 PaxDb:P25162 EnsemblMetazoa:FBtr0084681 GeneID:42920
KEGG:dme:Dmel_CG6798 CTD:42920 FlyBase:FBgn0004118
InParanoid:P25162 OMA:AYDNGMQ OrthoDB:EOG480GBW PhylomeDB:P25162
GenomeRNAi:42920 NextBio:831273 Bgee:P25162 GermOnline:CG6798
Uniprot:P25162
Length = 519
Score = 1214 (432.4 bits), Expect = 1.7e-123, P = 1.7e-123
Identities = 233/392 (59%), Positives = 284/392 (72%)
Query: 30 QGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQ 89
+ N + KRLYDDLLSNYNRLIRPV NN++ LTV +GLKLSQLIEVNLKNQ+MTTN+WV Q
Sbjct: 25 EANPDTKRLYDDLLSNYNRLIRPVVNNTETLTVWLGLKLSQLIEVNLKNQVMTTNLWVKQ 84
Query: 90 NLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVT 149
W DYKL+W PEEYGGV+ L+VPSEHIW+PDIVLYNN DGNYEVT
Sbjct: 85 R---------------WFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYNNWDGNYEVT 129
Query: 150 IMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQ 209
+MTKA L Y G+V W PPAIYKS CE++VEYFP+D Q C MKFGSWTY+G VDLKH+ Q
Sbjct: 130 LMTKATLKYTGEVFWEPPAIYKSSCEMNVEYFPYDEQICFMKFGSWTYNGAQVDLKHLDQ 189
Query: 210 GPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYT 269
P S+ + +GIDL ++YLSVEWDI++VPA +NE++Y EP+ DI F +T+RRKTLFYT
Sbjct: 190 IPGSNLVQVGIDLTEFYLSVEWDILEVPATKNEEYYPDTLEPFSDITFKLTMRRKTLFYT 249
Query: 270 VNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLG 329
VNLI+PCV ++FL+VLVFYLPSDSGEKV+LC AEIIPPTSL VPLLG
Sbjct: 250 VNLIVPCVALTFLTVLVFYLPSDSGEKVTLCISILVSLTVFFLLLAEIIPPTSLAVPLLG 309
Query: 330 KYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRPAXXXXX 389
KYLLFTMILV+LSV T+ VLN++FRSP TH M P V K+F+ +PK++ ++R
Sbjct: 310 KYLLFTMILVSLSVWTTVCVLNIHFRSPSTHNMSPLVRKLFLHFMPKLMMMRRTQYTLPD 369
Query: 390 XXXXXXXGVLTEVFDVPDYV-DYGGRYQTDFD 420
T DV D + D+ ++ D
Sbjct: 370 YDDSTPSNGYTNEIDVRDSISDFPSEFKDSQD 401
Score = 182 (69.1 bits), Expect = 8.8e-11, P = 8.8e-11
Identities = 33/59 (55%), Positives = 43/59 (72%)
Query: 499 KLARLASIHFCDLLTPINFL--QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
KL++L ++ + + N Q W DYKL+W PEEYGGV+ L+VPSEHIW+PDIVLYN
Sbjct: 62 KLSQLIEVNLKNQVMTTNLWVKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYN 120
>WB|WBGene00006797 [details] [associations]
symbol:unc-63 species:6239 "Caenorhabditis elegans"
[GO:0045211 "postsynaptic membrane" evidence=IEA;IDA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0040011
"locomotion" evidence=IMP] [GO:0006581 "acetylcholine catabolic
process" evidence=IMP] [GO:0009791 "post-embryonic development"
evidence=IMP] [GO:0040012 "regulation of locomotion" evidence=IMP]
[GO:0034220 "ion transmembrane transport" evidence=IMP] [GO:0046662
"regulation of oviposition" evidence=IMP] [GO:0031594
"neuromuscular junction" evidence=IDA] [GO:0015464 "acetylcholine
receptor activity" evidence=ISS;IMP] [GO:0022848
"acetylcholine-gated cation channel activity" evidence=IMP]
[GO:0007271 "synaptic transmission, cholinergic" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HSSP:P02711
GO:GO:0031594 GO:GO:0040011 GO:GO:0007271 GO:GO:0009791
GO:GO:0040012 GO:GO:0006581 GO:GO:0004889 HOGENOM:HOG000006756
GeneTree:ENSGT00630000089708 KO:K05312 eggNOG:NOG290206
GO:GO:0015464 GO:GO:0046662 EMBL:AF288374 EMBL:FO080728
RefSeq:NP_491533.2 UniGene:Cel.19329 ProteinModelPortal:Q9N587
SMR:Q9N587 DIP:DIP-42343N MINT:MINT-3383641 STRING:Q9N587
EnsemblMetazoa:Y110A7A.3 GeneID:172150 KEGG:cel:CELE_Y110A7A.3
UCSC:Y110A7A.3 CTD:172150 WormBase:Y110A7A.3 InParanoid:Q9N587
OMA:HTGKVRW DrugBank:DB00848 NextBio:874233 GO:GO:0022848
Uniprot:Q9N587
Length = 502
Score = 572 (206.4 bits), Expect = 1.0e-111, Sum P(2) = 1.0e-111
Identities = 110/188 (58%), Positives = 135/188 (71%)
Query: 19 LTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKN 78
L FL+ S N +A RL++DL+++YN+L+RPV N + L V LKLSQL++V+ KN
Sbjct: 12 LIFLLLSPP-THANRDANRLFEDLIADYNKLVRPVSENGETLVVTFKLKLSQLLDVHEKN 70
Query: 79 QIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVL 138
QIMTTNVW+ + W DYKL+W P EYGGV+ L+VPS+ IWLPD+VL
Sbjct: 71 QIMTTNVWLQHS---------------WMDYKLRWDPVEYGGVEVLYVPSDTIWLPDVVL 115
Query: 139 YNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYD 198
YNNADGNY+VTIMTKA L Y+G V W PPAIYKS C+IDVE+FPFD Q C MKFGSWTY
Sbjct: 116 YNNADGNYQVTIMTKAKLTYNGTVEWAPPAIYKSMCQIDVEFFPFDRQQCEMKFGSWTYG 175
Query: 199 GYTVDLKH 206
G VDL+H
Sbjct: 176 GLEVDLQH 183
Score = 551 (199.0 bits), Expect = 1.0e-111, Sum P(2) = 1.0e-111
Identities = 103/168 (61%), Positives = 122/168 (72%)
Query: 216 IDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLIIP 275
+D GIDL DYY SVEWDI+ VP R+ K Y CCE P+ DI + I LRRKTLFYTVNLI P
Sbjct: 210 VDRGIDLSDYYPSVEWDILNVPGKRHSKRYPCCESPFIDITYEIHLRRKTLFYTVNLIFP 269
Query: 276 CVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLFT 335
VGISFL+ LVFYLPSD GEK+SLC EIIP TSL +PL+GKYLLFT
Sbjct: 270 SVGISFLTALVFYLPSDGGEKISLCISILISLTVFFLLLVEIIPSTSLVIPLIGKYLLFT 329
Query: 336 MILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
M+LVTLSVVVT+ LNV++RSP TH M W+ ++F++ LPK L + RP
Sbjct: 330 MVLVTLSVVVTVVTLNVHYRSPTTHTMPKWMKRLFVDFLPKYLLMTRP 377
Score = 179 (68.1 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 40/101 (39%), Positives = 59/101 (58%)
Query: 463 MCPPTQDGTDVSPTFDNQMI---LMPRPLTWR---LPYELPSKLARLASIHFCDLLTPIN 516
+ PPT D + F++ + + RP++ L KL++L +H + + N
Sbjct: 17 LSPPTHANRDANRLFEDLIADYNKLVRPVSENGETLVVTFKLKLSQLLDVHEKNQIMTTN 76
Query: 517 -FLQE-WEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+LQ W DYKL+W P EYGGV+ L+VPS+ IWLPD+VLYN
Sbjct: 77 VWLQHSWMDYKLRWDPVEYGGVEVLYVPSDTIWLPDVVLYN 117
>WB|WBGene00006774 [details] [associations]
symbol:unc-38 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA;IDA] [GO:0045211
"postsynaptic membrane" evidence=IEA;IDA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA;IDA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0040011 "locomotion" evidence=IMP] [GO:0046662
"regulation of oviposition" evidence=IMP] [GO:0007274
"neuromuscular synaptic transmission" evidence=IDA] [GO:0045202
"synapse" evidence=IDA] [GO:0043005 "neuron projection"
evidence=IDA] [GO:0015464 "acetylcholine receptor activity"
evidence=IDA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007274
GO:GO:0043005 GO:GO:0040011 GO:GO:0004889 HOGENOM:HOG000006756
GeneTree:ENSGT00630000089708 eggNOG:NOG235631 KO:K05312
GO:GO:0015464 GO:GO:0046662 EMBL:X98599 EMBL:X98600 EMBL:FO081197
PIR:T25720 PIR:T43634 RefSeq:NP_491472.1 UniGene:Cel.19675
ProteinModelPortal:Q23022 SMR:Q23022 MINT:MINT-3383663
STRING:Q23022 TCDB:1.A.9.1.2 EnsemblMetazoa:F21F3.5 GeneID:172105
KEGG:cel:CELE_F21F3.5 UCSC:F21F3.5 CTD:172105 WormBase:F21F3.5
InParanoid:Q23022 OMA:ENICFIA NextBio:874031 Uniprot:Q23022
Length = 511
Score = 998 (356.4 bits), Expect = 1.3e-100, P = 1.3e-100
Identities = 202/380 (53%), Positives = 260/380 (68%)
Query: 19 LTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKN 78
L F + + + +GN++AKRLYDDL+ NYNR RP + + LT+K+ L+LSQ+I+V+
Sbjct: 11 LLFCISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVH--- 67
Query: 79 QIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVL 138
+I +QIMT +VW+ Q W D KL W P YGGV+ L+VP E IW+PDIVL
Sbjct: 68 EI------------DQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVPYEMIWVPDIVL 115
Query: 139 YNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYD 198
YNNAD NY +TI TKA LHY G+V W PPAI+KS C+IDV +FPFD Q C +KFGSWT+
Sbjct: 116 YNNADSNYNITISTKATLHYTGEVTWEPPAIFKSMCQIDVRWFPFDEQQCHLKFGSWTFS 175
Query: 199 G--YTVDLKH-ILQGPDS-------DKIDI---GIDLQDYYLSVEWDIMKVPAVRNEKFY 245
+V+L L+ + D + + GIDL DYY SVEWDIM A R K Y
Sbjct: 176 ENLLSVELNEPSLRYEEEIDEKGIIDNVTVAEDGIDLSDYYPSVEWDIMSRVAKRRAKNY 235
Query: 246 -SCC-EEPYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXX 303
SCC + Y D+ + + LRRK LFYTVNL+ PCVGISFL++LVFYLPSDSGEKV+LC
Sbjct: 236 PSCCPQSAYIDVTYYLQLRRKPLFYTVNLVFPCVGISFLTILVFYLPSDSGEKVTLCISI 295
Query: 304 XXXXXXXXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMK 363
EIIP TS+T+PL+GKYLLFTM++VTLSVVVT+ LN++FR+P TH+M
Sbjct: 296 LVALTIFFLLLTEIIPATSITLPLIGKYLLFTMVMVTLSVVVTVISLNLHFRTPTTHLMP 355
Query: 364 PWVHKVFIEVLPKILFIQRP 383
WV KVF++ LPK+LF++RP
Sbjct: 356 NWVKKVFLKWLPKLLFMRRP 375
Score = 153 (58.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 38/97 (39%), Positives = 54/97 (55%)
Query: 467 TQDGTDVSPTFDNQMILMPR---PLTWR---LPYELPSKLARLASIHFCD-LLTPINFL- 518
T+ D +D+ M+ R P T L +L +L+++ +H D ++T +L
Sbjct: 21 TEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLK 80
Query: 519 QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
Q W D KL W P YGGV+ L+VP E IW+PDIVLYN
Sbjct: 81 QTWIDRKLSWDPVNYGGVNVLYVPYEMIWVPDIVLYN 117
>RGD|2346 [details] [associations]
symbol:Chrna4 "cholinergic receptor, nicotinic, alpha 4 (neuronal)"
species:10116 "Rattus norvegicus" [GO:0001508 "regulation of action
potential" evidence=ISO] [GO:0001666 "response to hypoxia"
evidence=ISO] [GO:0004889 "acetylcholine-activated cation-selective
channel activity" evidence=IEA;IC;ISO;IDA] [GO:0005216 "ion channel
activity" evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0005892
"acetylcholine-gated channel complex" evidence=ISO;IDA;TAS]
[GO:0006281 "DNA repair" evidence=ISO] [GO:0006812 "cation transport"
evidence=ISO] [GO:0006816 "calcium ion transport" evidence=ISO]
[GO:0006979 "response to oxidative stress" evidence=ISO] [GO:0007165
"signal transduction" evidence=ISO] [GO:0007271 "synaptic
transmission, cholinergic" evidence=ISO;IMP] [GO:0007585 "respiratory
gaseous exchange" evidence=ISO] [GO:0007626 "locomotory behavior"
evidence=ISO] [GO:0008144 "drug binding" evidence=IDA] [GO:0009897
"external side of plasma membrane" evidence=ISO] [GO:0014059
"regulation of dopamine secretion" evidence=ISO] [GO:0015464
"acetylcholine receptor activity" evidence=ISO] [GO:0016020
"membrane" evidence=ISO;IDA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0019233 "sensory perception of pain" evidence=ISO]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030425 "dendrite"
evidence=IDA] [GO:0034220 "ion transmembrane transport" evidence=ISO]
[GO:0035094 "response to nicotine" evidence=ISO] [GO:0035095
"behavioral response to nicotine" evidence=ISO] [GO:0035640
"exploration behavior" evidence=ISO] [GO:0042113 "B cell activation"
evidence=ISO] [GO:0042166 "acetylcholine binding" evidence=IDA]
[GO:0042391 "regulation of membrane potential" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0050877 "neurological
system process" evidence=ISO] [GO:0050890 "cognition" evidence=ISO]
[GO:0051291 "protein heterooligomerization" evidence=IDA] [GO:0051899
"membrane depolarization" evidence=ISO] [GO:0060080 "regulation of
inhibitory postsynaptic membrane potential" evidence=ISO]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 RGD:2346 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0043025 GO:GO:0030425
GO:GO:0007271 GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 eggNOG:NOG290206 GO:GO:0005892 OrthoDB:EOG480HWN
CTD:1137 KO:K04806 EMBL:M15682 EMBL:L31620 EMBL:AF007212
IPI:IPI00214860 IPI:IPI00230863 RefSeq:NP_077330.1 UniGene:Rn.9697
PDB:1OLE PDBsum:1OLE ProteinModelPortal:P09483 SMR:P09483
STRING:P09483 PhosphoSite:P09483 GeneID:25590 KEGG:rno:25590
UCSC:RGD:2346 InParanoid:P09483 BindingDB:P09483 ChEMBL:CHEMBL307
NextBio:607263 ArrayExpress:P09483 Genevestigator:P09483
GermOnline:ENSRNOG00000011202 Uniprot:P09483
Length = 630
Score = 923 (330.0 bits), Expect = 3.0e-95, Sum P(2) = 3.0e-95
Identities = 188/377 (49%), Positives = 242/377 (64%)
Query: 14 VLFPSLTFLVFSVIIAQGNDEAK-----RLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKL 68
+L P L L ++ A + E + RL L S YN+ RPV N SD + V+ GL +
Sbjct: 13 LLLPLLLLLGTGLLPASSHIETRAHAEERLLKRLFSGYNKWSRPVANISDVVLVRFGLSI 72
Query: 69 SQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPS 128
+QLI+V+ KNQ+MTTNVWV Q EW DYKL+W P +Y V ++ +PS
Sbjct: 73 AQLIDVDEKNQMMTTNVWVKQ---------------EWHDYKLRWDPGDYENVTSIRIPS 117
Query: 129 EHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTC 188
E IW PDIVLYNNADG++ VT +TKA L YDG+V W PPAIYKS C IDV +FPFD Q C
Sbjct: 118 ELIWRPDIVLYNNADGDFAVTHLTKAHLFYDGRVQWTPPAIYKSSCSIDVTFFPFDQQNC 177
Query: 189 VMKFGSWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCC 248
MKFGSWTYD +DL + +D D++ S EW I+ N + Y CC
Sbjct: 178 TMKFGSWTYDKAKIDLV---------SMHSRVDQLDFWESGEWVIVDAVGTYNTRKYECC 228
Query: 249 EEPYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXX 308
E YPDI + +RR LFYT+NLIIPC+ IS L+VLVFYLPS+ GEKV+LC
Sbjct: 229 AEIYPDITYAFIIRRLPLFYTINLIIPCLLISCLTVLVFYLPSECGEKVTLCISVLLSLT 288
Query: 309 XXXXXXAEIIP-PTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVH 367
EIIP PTSL +PL+G+YLLFTMI VTLS+V+T+ VLNV+ RSP TH M WV
Sbjct: 289 VFLLLITEIIPSPTSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHHRSPRTHTMPAWVR 348
Query: 368 KVFIEVLPKILFIQRPA 384
+VF++++P++LF++RP+
Sbjct: 349 RVFLDIVPRLLFMKRPS 365
Score = 141 (54.7 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 23/37 (62%), Positives = 28/37 (75%)
Query: 519 QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
QEW DYKL+W P +Y V ++ +PSE IW PDIVLYN
Sbjct: 93 QEWHDYKLRWDPGDYENVTSIRIPSELIWRPDIVLYN 129
Score = 44 (20.5 bits), Expect = 3.0e-95, Sum P(2) = 3.0e-95
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 443 GDPLPISNLEADDIMFSPTSMCPPTQDGTDVSPTFDNQMILMP 485
G+P +S++ + +PT C PT + PT + + +P
Sbjct: 393 GEPGILSDICNQGLSPAPT-FCNPTDTAVETQPTCRSPPLEVP 434
>UNIPROTKB|P09483 [details] [associations]
symbol:Chrna4 "Neuronal acetylcholine receptor subunit
alpha-4" species:10116 "Rattus norvegicus" [GO:0030054 "cell
junction" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 RGD:2346 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0043025 GO:GO:0030425
GO:GO:0007271 GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 eggNOG:NOG290206 GO:GO:0005892
OrthoDB:EOG480HWN CTD:1137 KO:K04806 EMBL:M15682 EMBL:L31620
EMBL:AF007212 IPI:IPI00214860 IPI:IPI00230863 RefSeq:NP_077330.1
UniGene:Rn.9697 PDB:1OLE PDBsum:1OLE ProteinModelPortal:P09483
SMR:P09483 STRING:P09483 PhosphoSite:P09483 GeneID:25590
KEGG:rno:25590 UCSC:RGD:2346 InParanoid:P09483 BindingDB:P09483
ChEMBL:CHEMBL307 NextBio:607263 ArrayExpress:P09483
Genevestigator:P09483 GermOnline:ENSRNOG00000011202 Uniprot:P09483
Length = 630
Score = 923 (330.0 bits), Expect = 3.0e-95, Sum P(2) = 3.0e-95
Identities = 188/377 (49%), Positives = 242/377 (64%)
Query: 14 VLFPSLTFLVFSVIIAQGNDEAK-----RLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKL 68
+L P L L ++ A + E + RL L S YN+ RPV N SD + V+ GL +
Sbjct: 13 LLLPLLLLLGTGLLPASSHIETRAHAEERLLKRLFSGYNKWSRPVANISDVVLVRFGLSI 72
Query: 69 SQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPS 128
+QLI+V+ KNQ+MTTNVWV Q EW DYKL+W P +Y V ++ +PS
Sbjct: 73 AQLIDVDEKNQMMTTNVWVKQ---------------EWHDYKLRWDPGDYENVTSIRIPS 117
Query: 129 EHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTC 188
E IW PDIVLYNNADG++ VT +TKA L YDG+V W PPAIYKS C IDV +FPFD Q C
Sbjct: 118 ELIWRPDIVLYNNADGDFAVTHLTKAHLFYDGRVQWTPPAIYKSSCSIDVTFFPFDQQNC 177
Query: 189 VMKFGSWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCC 248
MKFGSWTYD +DL + +D D++ S EW I+ N + Y CC
Sbjct: 178 TMKFGSWTYDKAKIDLV---------SMHSRVDQLDFWESGEWVIVDAVGTYNTRKYECC 228
Query: 249 EEPYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXX 308
E YPDI + +RR LFYT+NLIIPC+ IS L+VLVFYLPS+ GEKV+LC
Sbjct: 229 AEIYPDITYAFIIRRLPLFYTINLIIPCLLISCLTVLVFYLPSECGEKVTLCISVLLSLT 288
Query: 309 XXXXXXAEIIP-PTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVH 367
EIIP PTSL +PL+G+YLLFTMI VTLS+V+T+ VLNV+ RSP TH M WV
Sbjct: 289 VFLLLITEIIPSPTSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHHRSPRTHTMPAWVR 348
Query: 368 KVFIEVLPKILFIQRPA 384
+VF++++P++LF++RP+
Sbjct: 349 RVFLDIVPRLLFMKRPS 365
Score = 141 (54.7 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 23/37 (62%), Positives = 28/37 (75%)
Query: 519 QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
QEW DYKL+W P +Y V ++ +PSE IW PDIVLYN
Sbjct: 93 QEWHDYKLRWDPGDYENVTSIRIPSELIWRPDIVLYN 129
Score = 44 (20.5 bits), Expect = 3.0e-95, Sum P(2) = 3.0e-95
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 443 GDPLPISNLEADDIMFSPTSMCPPTQDGTDVSPTFDNQMILMP 485
G+P +S++ + +PT C PT + PT + + +P
Sbjct: 393 GEPGILSDICNQGLSPAPT-FCNPTDTAVETQPTCRSPPLEVP 434
>UNIPROTKB|J3KMY9 [details] [associations]
symbol:CHRNA2 "Neuronal acetylcholine receptor subunit
alpha-2" species:9606 "Homo sapiens" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889 EMBL:AF311103
HGNC:HGNC:1956 ChiTaRS:CHRNA2 ProteinModelPortal:J3KMY9
Ensembl:ENST00000240132 Uniprot:J3KMY9
Length = 514
Score = 853 (305.3 bits), Expect = 2.1e-92, Sum P(2) = 2.1e-92
Identities = 161/292 (55%), Positives = 198/292 (67%)
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
KNQ+MTTNVW+ QEW DYKL+W+P ++G + +L VPSE IW+PDIVLYNNADG + VT M
Sbjct: 86 KNQMMTTNVWLKQEWSDYKLRWNPTDFGNITSLRVPSEMIWIPDIVLYNNADGEFAVTHM 145
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
TKA L G V W PPAIYKS C IDV +FPFD Q C MKFGSWTYD +DL+ + Q
Sbjct: 146 TKAHLFSTGTVHWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDKAKIDLEQMEQT- 204
Query: 212 DSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVN 271
+DL+DY+ S EW I+ N K Y CC E YPD+ + +RR LFYT+N
Sbjct: 205 --------VDLKDYWESGEWAIVNATGTYNSKKYDCCAEIYPDVTYAFVIRRLPLFYTIN 256
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
LIIPC+ IS L+VLVFYLPSD GEK++LC EIIP TSL +PL+G+Y
Sbjct: 257 LIIPCLLISCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEY 316
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
LLFTMI VTLS+V+T+ VLNV+ RSP TH M WV + +P+ L + RP
Sbjct: 317 LLFTMIFVTLSIVITVFVLNVHHRSPSTHTMPHWVRGALLGCVPRWLLMNRP 368
Score = 155 (59.6 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 25/45 (55%), Positives = 34/45 (75%)
Query: 511 LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+ T + QEW DYKL+W+P ++G + +L VPSE IW+PDIVLYN
Sbjct: 90 MTTNVWLKQEWSDYKLRWNPTDFGNITSLRVPSEMIWIPDIVLYN 134
Score = 87 (35.7 bits), Expect = 2.1e-92, Sum P(2) = 2.1e-92
Identities = 31/84 (36%), Positives = 37/84 (44%)
Query: 6 PPRTAAMHVLFPSLTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMG 65
PPR + PS T L + D RL+ L YNR RPV N SD
Sbjct: 33 PPRAPGDPLSSPSPTALPQGGSHTETED---RLFKHLFRGYNRWARPVPNTSD------- 82
Query: 66 LKLSQLIEVNLKNQIMTTNVWVNQ 89
V+ KNQ+MTTNVW+ Q
Sbjct: 83 --------VDEKNQMMTTNVWLKQ 98
>UNIPROTKB|F1RGM6 [details] [associations]
symbol:CHRNB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060084 "synaptic transmission involved in micturition"
evidence=IEA] [GO:0051963 "regulation of synapse assembly"
evidence=IEA] [GO:0051899 "membrane depolarization" evidence=IEA]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IEA]
[GO:0045759 "negative regulation of action potential" evidence=IEA]
[GO:0045471 "response to ethanol" evidence=IEA] [GO:0045188
"regulation of circadian sleep/wake cycle, non-REM sleep"
evidence=IEA] [GO:0042320 "regulation of circadian sleep/wake
cycle, REM sleep" evidence=IEA] [GO:0042220 "response to cocaine"
evidence=IEA] [GO:0042166 "acetylcholine binding" evidence=IEA]
[GO:0042113 "B cell activation" evidence=IEA] [GO:0042053
"regulation of dopamine metabolic process" evidence=IEA]
[GO:0035176 "social behavior" evidence=IEA] [GO:0035095 "behavioral
response to nicotine" evidence=IEA] [GO:0033603 "positive
regulation of dopamine secretion" evidence=IEA] [GO:0032226
"positive regulation of synaptic transmission, dopaminergic"
evidence=IEA] [GO:0021952 "central nervous system projection neuron
axonogenesis" evidence=IEA] [GO:0021771 "lateral geniculate nucleus
development" evidence=IEA] [GO:0021631 "optic nerve morphogenesis"
evidence=IEA] [GO:0021562 "vestibulocochlear nerve development"
evidence=IEA] [GO:0019233 "sensory perception of pain"
evidence=IEA] [GO:0015464 "acetylcholine receptor activity"
evidence=IEA] [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0008542 "visual learning" evidence=IEA]
[GO:0007626 "locomotory behavior" evidence=IEA] [GO:0007613
"memory" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0006939 "smooth muscle contraction" evidence=IEA] [GO:0006816
"calcium ion transport" evidence=IEA] [GO:0005892
"acetylcholine-gated channel complex" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=IEA]
[GO:0001661 "conditioned taste aversion" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0009897 GO:GO:0045471 GO:GO:0042220
GO:GO:0007613 GO:GO:0019233 GO:GO:0035095 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0033603 GO:GO:0007601
GO:GO:0001666 GO:GO:0008542 GO:GO:0007626 GO:GO:0048814
GO:GO:0042166 GO:GO:0004889 GO:GO:0005892 GO:GO:0015464
GO:GO:0060084 GO:GO:0042113 GO:GO:0006816 GO:GO:0051899
GO:GO:0007605 GO:GO:0021952 GO:GO:0001661 GO:GO:0021771
GO:GO:0045759 GO:GO:0021631 GO:GO:0032226 GO:GO:0045188
GO:GO:0042320 GO:GO:0042053 GO:GO:0051963 GO:GO:0006939
GO:GO:0035176 GO:GO:0021562 GeneTree:ENSGT00620000087691
OMA:YSEIPLR EMBL:CU469085 Ensembl:ENSSSCT00000007170 Uniprot:F1RGM6
Length = 502
Score = 909 (325.0 bits), Expect = 3.5e-91, P = 3.5e-91
Identities = 180/355 (50%), Positives = 240/355 (67%)
Query: 31 GNDEAKRLYDDLL--SNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVN 88
G D +RL + LL S YN+LIRP N S+ +TV++ + L+QLI +
Sbjct: 25 GTDTEERLVEHLLDPSRYNKLIRPATNGSELVTVQLMVSLAQLI---------------S 69
Query: 89 QNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEV 148
Q+ + QIMTTNVW+ QEWEDY+L W PEE+ + + +PS+HIWLPD+VLYNNADG YEV
Sbjct: 70 QHEREQIMTTNVWLTQEWEDYRLTWKPEEFDNMKKVRLPSKHIWLPDVVLYNNADGMYEV 129
Query: 149 TIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHIL 208
+ + A++ YDG + W PPAIYKS C+I+V++FPFD Q C MKF SWTYD +DL +L
Sbjct: 130 SFYSNAVVSYDGSIFWLPPAIYKSACKIEVKHFPFDQQNCTMKFRSWTYDRTEIDL--VL 187
Query: 209 QGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFY 268
K D+ L D+ S EWDI+ +P RNE + + Y DI ++ +RRK LFY
Sbjct: 188 ------KSDVA-SLDDFTPSGEWDIVALPGRRNE---NPDDSTYVDITYDFIIRRKPLFY 237
Query: 269 TVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLL 328
T+NLIIPCV I+ L++LVFYLPSD GEK++LC ++I+PPTSL VPL+
Sbjct: 238 TINLIIPCVLITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLV 297
Query: 329 GKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
GKYL+FTM+LVT S+V ++ VLNV+ RSP TH M PWV VF+E LP +LF+Q+P
Sbjct: 298 GKYLMFTMVLVTFSIVTSVCVLNVHHRSPTTHTMAPWVKVVFLEKLPTLLFMQQP 352
Score = 161 (61.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 30/63 (47%), Positives = 41/63 (65%)
Query: 495 ELPSKLARLASIHFCDLLTPIN--FLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIV 552
+L LA+L S H + + N QEWEDY+L W PEE+ + + +PS+HIWLPD+V
Sbjct: 59 QLMVSLAQLISQHEREQIMTTNVWLTQEWEDYRLTWKPEEFDNMKKVRLPSKHIWLPDVV 118
Query: 553 LYN 555
LYN
Sbjct: 119 LYN 121
>UNIPROTKB|F1MUN1 [details] [associations]
symbol:CHRNB2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060084 "synaptic transmission involved in micturition"
evidence=IEA] [GO:0051963 "regulation of synapse assembly"
evidence=IEA] [GO:0051899 "membrane depolarization" evidence=IEA]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IEA]
[GO:0045759 "negative regulation of action potential" evidence=IEA]
[GO:0045471 "response to ethanol" evidence=IEA] [GO:0045188
"regulation of circadian sleep/wake cycle, non-REM sleep"
evidence=IEA] [GO:0042320 "regulation of circadian sleep/wake
cycle, REM sleep" evidence=IEA] [GO:0042220 "response to cocaine"
evidence=IEA] [GO:0042166 "acetylcholine binding" evidence=IEA]
[GO:0042113 "B cell activation" evidence=IEA] [GO:0042053
"regulation of dopamine metabolic process" evidence=IEA]
[GO:0035176 "social behavior" evidence=IEA] [GO:0035095 "behavioral
response to nicotine" evidence=IEA] [GO:0033603 "positive
regulation of dopamine secretion" evidence=IEA] [GO:0032226
"positive regulation of synaptic transmission, dopaminergic"
evidence=IEA] [GO:0021952 "central nervous system projection neuron
axonogenesis" evidence=IEA] [GO:0021771 "lateral geniculate nucleus
development" evidence=IEA] [GO:0021631 "optic nerve morphogenesis"
evidence=IEA] [GO:0021562 "vestibulocochlear nerve development"
evidence=IEA] [GO:0019233 "sensory perception of pain"
evidence=IEA] [GO:0015464 "acetylcholine receptor activity"
evidence=IEA] [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0008542 "visual learning" evidence=IEA]
[GO:0007626 "locomotory behavior" evidence=IEA] [GO:0007613
"memory" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0006939 "smooth muscle contraction" evidence=IEA] [GO:0006816
"calcium ion transport" evidence=IEA] [GO:0005892
"acetylcholine-gated channel complex" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=IEA]
[GO:0001661 "conditioned taste aversion" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0009897 GO:GO:0045471 GO:GO:0042220
GO:GO:0007613 GO:GO:0019233 GO:GO:0035095 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0033603 GO:GO:0007601
GO:GO:0001666 GO:GO:0008542 GO:GO:0007626 GO:GO:0048814
GO:GO:0042166 GO:GO:0004889 GO:GO:0005892 GO:GO:0015464
GO:GO:0060084 GO:GO:0042113 GO:GO:0006816 GO:GO:0051899
GO:GO:0007605 CTD:1141 KO:K04813 GO:GO:0021952 GO:GO:0001661
GO:GO:0021771 GO:GO:0045759 GO:GO:0021631 GO:GO:0032226
GO:GO:0045188 GO:GO:0042320 GO:GO:0042053 GO:GO:0051963
GO:GO:0006939 GO:GO:0035176 GO:GO:0021562
GeneTree:ENSGT00620000087691 EMBL:DAAA02007166 IPI:IPI00726026
RefSeq:NP_001179403.1 UniGene:Bt.13038 ProteinModelPortal:F1MUN1
Ensembl:ENSBTAT00000009892 GeneID:517519 KEGG:bta:517519
OMA:YSEIPLR NextBio:20872458 Uniprot:F1MUN1
Length = 501
Score = 908 (324.7 bits), Expect = 4.5e-91, P = 4.5e-91
Identities = 180/355 (50%), Positives = 240/355 (67%)
Query: 31 GNDEAKRLYDDLL--SNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVN 88
G D +RL + LL S YN+LIRP N S+ +TV++ + L+QLI V+ + QIMTTNVW+
Sbjct: 25 GTDTEERLVEHLLDPSRYNKLIRPATNGSELVTVQLMVSLAQLISVHEREQIMTTNVWLT 84
Query: 89 QNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEV 148
Q EWEDY+L W PEE+ + + +PS+HIWLPD+VLYNNADG YEV
Sbjct: 85 Q---------------EWEDYRLTWKPEEFDNMKKVRLPSKHIWLPDVVLYNNADGMYEV 129
Query: 149 TIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHIL 208
+ + A++ YDG + W PPAIYKS C+I+V++FPFD Q C MKF SWTYD +DL +L
Sbjct: 130 SFYSNAVVSYDGSIFWLPPAIYKSACKIEVKHFPFDQQNCTMKFRSWTYDRTEIDL--VL 187
Query: 209 QGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFY 268
K D+ +L D+ S EWDI+ +P RNE + + Y DI ++ +RRK LFY
Sbjct: 188 ------KSDVA-NLDDFTPSGEWDIVALPGRRNE---NPDDSTYVDITYDFIIRRKPLFY 237
Query: 269 TVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLL 328
T+NLIIPCV I+ L++LVFYLPSD GEK++LC ++I+PPTSL VPL+
Sbjct: 238 TINLIIPCVLITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLV 297
Query: 329 GKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
GKYL+FTM+LVT S+V ++ VLNV+ RSP TH M PWV VF+E LP +LF+Q+P
Sbjct: 298 GKYLMFTMVLVTFSIVTSVCVLNVHHRSPTTHTMAPWVKVVFLEKLPTLLFMQQP 352
Score = 167 (63.8 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 30/63 (47%), Positives = 42/63 (66%)
Query: 495 ELPSKLARLASIHFCDLLTPIN--FLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIV 552
+L LA+L S+H + + N QEWEDY+L W PEE+ + + +PS+HIWLPD+V
Sbjct: 59 QLMVSLAQLISVHEREQIMTTNVWLTQEWEDYRLTWKPEEFDNMKKVRLPSKHIWLPDVV 118
Query: 553 LYN 555
LYN
Sbjct: 119 LYN 121
>MGI|MGI:87891 [details] [associations]
symbol:Chrnb2 "cholinergic receptor, nicotinic, beta
polypeptide 2 (neuronal)" species:10090 "Mus musculus" [GO:0001508
"regulation of action potential" evidence=IGI;IMP] [GO:0001661
"conditioned taste aversion" evidence=IMP] [GO:0001666 "response to
hypoxia" evidence=ISO;IMP] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=ISO;IGI;IMP;IDA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=ISO;IDA] [GO:0005892 "acetylcholine-gated
channel complex" evidence=ISO;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006812
"cation transport" evidence=IMP;IDA] [GO:0006816 "calcium ion
transport" evidence=IGI] [GO:0006939 "smooth muscle contraction"
evidence=IGI] [GO:0007165 "signal transduction" evidence=ISO]
[GO:0007271 "synaptic transmission, cholinergic" evidence=ISO]
[GO:0007601 "visual perception" evidence=IMP] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0007612 "learning"
evidence=ISO;IMP] [GO:0007613 "memory" evidence=ISO;IMP]
[GO:0007626 "locomotory behavior" evidence=IMP] [GO:0008144 "drug
binding" evidence=ISO] [GO:0008306 "associative learning"
evidence=IGI] [GO:0008542 "visual learning" evidence=ISO;IMP]
[GO:0009897 "external side of plasma membrane" evidence=IDA]
[GO:0014059 "regulation of dopamine secretion" evidence=IMP]
[GO:0015464 "acetylcholine receptor activity" evidence=ISO]
[GO:0016020 "membrane" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0019233 "sensory perception of pain"
evidence=IMP] [GO:0021562 "vestibulocochlear nerve development"
evidence=IMP] [GO:0021631 "optic nerve morphogenesis" evidence=IMP]
[GO:0021771 "lateral geniculate nucleus development" evidence=IMP]
[GO:0021952 "central nervous system projection neuron axonogenesis"
evidence=IMP] [GO:0021955 "central nervous system neuron
axonogenesis" evidence=IMP] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030890 "positive regulation of B cell
proliferation" evidence=IC;IGI] [GO:0032225 "regulation of synaptic
transmission, dopaminergic" evidence=IMP] [GO:0032226 "positive
regulation of synaptic transmission, dopaminergic" evidence=IMP]
[GO:0033603 "positive regulation of dopamine secretion"
evidence=IMP] [GO:0034220 "ion transmembrane transport"
evidence=IGI;IMP;IDA] [GO:0035094 "response to nicotine"
evidence=ISO;IGI;IMP] [GO:0035095 "behavioral response to nicotine"
evidence=ISO;IMP] [GO:0035176 "social behavior" evidence=IMP]
[GO:0042053 "regulation of dopamine metabolic process"
evidence=IMP] [GO:0042113 "B cell activation" evidence=IMP]
[GO:0042166 "acetylcholine binding" evidence=ISO] [GO:0042220
"response to cocaine" evidence=IMP] [GO:0042320 "regulation of
circadian sleep/wake cycle, REM sleep" evidence=IMP] [GO:0042391
"regulation of membrane potential" evidence=IGI;IMP] [GO:0045188
"regulation of circadian sleep/wake cycle, non-REM sleep"
evidence=IMP] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0045471 "response to
ethanol" evidence=IMP] [GO:0045759 "negative regulation of action
potential" evidence=IMP] [GO:0048814 "regulation of dendrite
morphogenesis" evidence=IMP] [GO:0050877 "neurological system
process" evidence=ISO] [GO:0050890 "cognition" evidence=ISO]
[GO:0051291 "protein heterooligomerization" evidence=ISO]
[GO:0051899 "membrane depolarization" evidence=IMP] [GO:0051963
"regulation of synapse assembly" evidence=IMP] [GO:0060084
"synaptic transmission involved in micturition" evidence=IGI]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 MGI:MGI:87891
GO:GO:0009897 GO:GO:0045471 GO:GO:0042220 GO:GO:0007613
GO:GO:0019233 GO:GO:0035095 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0033603 GO:GO:0007601
GO:GO:0001666 GO:GO:0008542 GO:GO:0007626 GO:GO:0048814
HOVERGEN:HBG003756 GO:GO:0004889 eggNOG:NOG290206 GO:GO:0005892
GO:GO:0060084 GO:GO:0042113 GO:GO:0006816 GO:GO:0051899
GO:GO:0007605 HOGENOM:HOG000006757 OrthoDB:EOG4HQDJ4 GO:GO:0021952
GO:GO:0001661 GO:GO:0021771 GO:GO:0045759 GO:GO:0021631
GO:GO:0030890 GO:GO:0032226 GO:GO:0045188 GO:GO:0042320
GO:GO:0042053 GO:GO:0051963 GO:GO:0006939 GO:GO:0035176
GO:GO:0021562 EMBL:AF299083 IPI:IPI00606399 UniGene:Mm.35088
ProteinModelPortal:Q9ERK7 SMR:Q9ERK7 DIP:DIP-48730N STRING:Q9ERK7
PRIDE:Q9ERK7 InParanoid:Q9ERK7 Genevestigator:Q9ERK7
GermOnline:ENSMUSG00000027950 Uniprot:Q9ERK7
Length = 501
Score = 908 (324.7 bits), Expect = 4.5e-91, P = 4.5e-91
Identities = 185/376 (49%), Positives = 249/376 (66%)
Query: 11 AMHVLFP-SLTFLVFSVIIAQGNDEAKRLYDDLL--SNYNRLIRPVGNNSDKLTVKMGLK 67
+M +LF L +L V+ G D +RL + LL S YN+LIRP N S+ +TV++ +
Sbjct: 7 SMALLFSFGLLWLCSGVL---GTDTEERLVEHLLDPSRYNKLIRPATNGSELVTVQLMVS 63
Query: 68 LSQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVP 127
L+QLI V+ + QIMTTNVW+ Q EWEDY+L W PE++ + + +P
Sbjct: 64 LAQLISVHEREQIMTTNVWLTQ---------------EWEDYRLTWKPEDFDNMKKVRLP 108
Query: 128 SEHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQT 187
S+HIWLPD+VLYNNADG YEV+ + A++ YDG + W PPAIYKS C+I+V++FPFD Q
Sbjct: 109 SKHIWLPDVVLYNNADGMYEVSFYSNAVVSYDGSIFWLPPAIYKSACKIEVKHFPFDQQN 168
Query: 188 CVMKFGSWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSC 247
C MKF SWTYD +DL +L K D+ L D+ S EWDI+ +P RNE +
Sbjct: 169 CTMKFRSWTYDRTEIDL--VL------KSDVA-SLDDFTPSGEWDIIALPGRRNE---NP 216
Query: 248 CEEPYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXX 307
+ Y DI ++ +RRK LFYT+NLIIPCV I+ L++LVFYLPSD GEK++LC
Sbjct: 217 DDSTYVDITYDFIIRRKPLFYTINLIIPCVLITSLAILVFYLPSDCGEKMTLCISVLLAL 276
Query: 308 XXXXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVH 367
++I+PPTSL VPL+GKYL+FTM+LVT S+V ++ VLNV+ RSP TH M PWV
Sbjct: 277 TVFLLLISKIVPPTSLDVPLVGKYLMFTMVLVTFSIVTSVCVLNVHHRSPTTHTMAPWVK 336
Query: 368 KVFIEVLPKILFIQRP 383
VF+E LP +LF+Q+P
Sbjct: 337 VVFLEKLPTLLFLQQP 352
Score = 164 (62.8 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 495 ELPSKLARLASIHFCDLLTPIN--FLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIV 552
+L LA+L S+H + + N QEWEDY+L W PE++ + + +PS+HIWLPD+V
Sbjct: 59 QLMVSLAQLISVHEREQIMTTNVWLTQEWEDYRLTWKPEDFDNMKKVRLPSKHIWLPDVV 118
Query: 553 LYN 555
LYN
Sbjct: 119 LYN 121
>UNIPROTKB|F1PQB1 [details] [associations]
symbol:CHRNB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889 CTD:1141 KO:K04813
GeneTree:ENSGT00620000087691 OMA:YSEIPLR EMBL:AAEX03005347
RefSeq:XP_547565.2 Ensembl:ENSCAFT00000027196 GeneID:490443
KEGG:cfa:490443 Uniprot:F1PQB1
Length = 478
Score = 907 (324.3 bits), Expect = 5.7e-91, P = 5.7e-91
Identities = 180/355 (50%), Positives = 239/355 (67%)
Query: 31 GNDEAKRLYDDLL--SNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVN 88
G D +RL + LL S YN+LIRP N S+ +TV++ + L+QLI V+ + QIMTTNVW+
Sbjct: 25 GTDTEERLVEHLLDPSRYNKLIRPATNGSELVTVQLMVSLAQLISVHEREQIMTTNVWLT 84
Query: 89 QNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEV 148
Q EWEDY+L W PEE+ + + +PS+HIWLPD+VLYNNADG YEV
Sbjct: 85 Q---------------EWEDYRLTWKPEEFDNMKKVRLPSKHIWLPDVVLYNNADGMYEV 129
Query: 149 TIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHIL 208
+ + A++ YDG + W PPAIYKS C+I+V++FPFD Q C MKF SWTYD +DL +L
Sbjct: 130 SFYSNAVVSYDGSIFWLPPAIYKSACKIEVKHFPFDQQNCTMKFRSWTYDRTEIDL--VL 187
Query: 209 QGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFY 268
K D+ L D+ S EWDI+ +P RNE + + Y DI ++ +RRK LFY
Sbjct: 188 ------KSDVA-SLDDFTPSGEWDIVALPGRRNE---NPDDSTYVDITYDFIIRRKPLFY 237
Query: 269 TVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLL 328
T+NLIIPCV I+ L++LVFYLPSD GEK++LC ++I+PPTSL VPL+
Sbjct: 238 TINLIIPCVLITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLV 297
Query: 329 GKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
GKYL+FTM+LVT S+V ++ VLNV+ RSP TH M PWV VF+E LP +LF+Q+P
Sbjct: 298 GKYLMFTMVLVTFSIVTSVCVLNVHHRSPTTHTMAPWVKVVFLEKLPTLLFMQQP 352
Score = 167 (63.8 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 30/63 (47%), Positives = 42/63 (66%)
Query: 495 ELPSKLARLASIHFCDLLTPIN--FLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIV 552
+L LA+L S+H + + N QEWEDY+L W PEE+ + + +PS+HIWLPD+V
Sbjct: 59 QLMVSLAQLISVHEREQIMTTNVWLTQEWEDYRLTWKPEEFDNMKKVRLPSKHIWLPDVV 118
Query: 553 LYN 555
LYN
Sbjct: 119 LYN 121
>RGD|2350 [details] [associations]
symbol:Chrnb2 "cholinergic receptor, nicotinic, beta 2 (neuronal)"
species:10116 "Rattus norvegicus" [GO:0001508 "regulation of action
potential" evidence=ISO] [GO:0001661 "conditioned taste aversion"
evidence=IEA;ISO] [GO:0001666 "response to hypoxia" evidence=IEA;ISO]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IC;ISO;IDA] [GO:0005886 "plasma membrane"
evidence=ISO;IDA] [GO:0005892 "acetylcholine-gated channel complex"
evidence=ISO;IDA] [GO:0006812 "cation transport" evidence=ISO]
[GO:0006816 "calcium ion transport" evidence=IEA;ISO] [GO:0006939
"smooth muscle contraction" evidence=IEA;ISO] [GO:0007165 "signal
transduction" evidence=ISO] [GO:0007271 "synaptic transmission,
cholinergic" evidence=IMP] [GO:0007601 "visual perception"
evidence=IEA;ISO] [GO:0007605 "sensory perception of sound"
evidence=IEA;ISO] [GO:0007612 "learning" evidence=ISO] [GO:0007613
"memory" evidence=IEA;ISO] [GO:0007626 "locomotory behavior"
evidence=IEA;ISO] [GO:0008144 "drug binding" evidence=IDA]
[GO:0008306 "associative learning" evidence=ISO] [GO:0008542 "visual
learning" evidence=IEA;ISO] [GO:0009897 "external side of plasma
membrane" evidence=IEA;ISO] [GO:0014059 "regulation of dopamine
secretion" evidence=ISO] [GO:0015464 "acetylcholine receptor
activity" evidence=IEA;ISO] [GO:0016020 "membrane" evidence=IDA]
[GO:0019233 "sensory perception of pain" evidence=IEA;ISO]
[GO:0021562 "vestibulocochlear nerve development" evidence=IEA;ISO]
[GO:0021631 "optic nerve morphogenesis" evidence=IEA;ISO] [GO:0021771
"lateral geniculate nucleus development" evidence=IEA;ISO]
[GO:0021952 "central nervous system projection neuron axonogenesis"
evidence=IEA;ISO] [GO:0021955 "central nervous system neuron
axonogenesis" evidence=ISO] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030890 "positive regulation of B cell proliferation"
evidence=ISO] [GO:0032225 "regulation of synaptic transmission,
dopaminergic" evidence=ISO] [GO:0032226 "positive regulation of
synaptic transmission, dopaminergic" evidence=IEA;ISO] [GO:0033603
"positive regulation of dopamine secretion" evidence=IEA;ISO]
[GO:0034220 "ion transmembrane transport" evidence=ISO] [GO:0035094
"response to nicotine" evidence=ISO;IMP] [GO:0035095 "behavioral
response to nicotine" evidence=IEA;ISO] [GO:0035176 "social behavior"
evidence=IEA;ISO] [GO:0042053 "regulation of dopamine metabolic
process" evidence=IEA;ISO] [GO:0042113 "B cell activation"
evidence=IEA;ISO] [GO:0042166 "acetylcholine binding"
evidence=ISO;IDA] [GO:0042220 "response to cocaine" evidence=IEA;ISO]
[GO:0042320 "regulation of circadian sleep/wake cycle, REM sleep"
evidence=IEA;ISO] [GO:0042391 "regulation of membrane potential"
evidence=ISO] [GO:0045188 "regulation of circadian sleep/wake cycle,
non-REM sleep" evidence=IEA;ISO] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0045471 "response to ethanol" evidence=IEA;ISO]
[GO:0045759 "negative regulation of action potential"
evidence=IEA;ISO] [GO:0048814 "regulation of dendrite morphogenesis"
evidence=IEA;ISO] [GO:0050877 "neurological system process"
evidence=ISO] [GO:0050890 "cognition" evidence=ISO] [GO:0051291
"protein heterooligomerization" evidence=IDA] [GO:0051899 "membrane
depolarization" evidence=IEA;ISO] [GO:0051963 "regulation of synapse
assembly" evidence=IEA;ISO] [GO:0060084 "synaptic transmission
involved in micturition" evidence=IEA;ISO] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 RGD:2350 GO:GO:0009897 GO:GO:0045471
GO:GO:0042220 GO:GO:0007613 GO:GO:0019233 GO:GO:0035095 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0033603 GO:GO:0007601
GO:GO:0001666 GO:GO:0008542 GO:GO:0007626 GO:GO:0007271 GO:GO:0048814
GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889 eggNOG:NOG290206
GO:GO:0005892 GO:GO:0015464 GO:GO:0060084 PDB:1OLF PDBsum:1OLF
GO:GO:0035094 GO:GO:0042113 GO:GO:0006816 GO:GO:0051899 PDB:1OLE
PDBsum:1OLE GO:GO:0007605 CTD:1141 KO:K04813 HOGENOM:HOG000006757
OMA:PRQNCAR OrthoDB:EOG4HQDJ4 GO:GO:0021952 GO:GO:0001661
GO:GO:0021771 GO:GO:0045759 GO:GO:0021631 GO:GO:0032226 GO:GO:0045188
GO:GO:0042320 GO:GO:0042053 GO:GO:0051963 GO:GO:0006939 GO:GO:0035176
GO:GO:0021562 EMBL:L31622 EMBL:AY574258 IPI:IPI00196738 PIR:JH0174
RefSeq:NP_062170.1 UniGene:Rn.53978 ProteinModelPortal:P12390
SMR:P12390 STRING:P12390 PRIDE:P12390 Ensembl:ENSRNOT00000028200
GeneID:54239 KEGG:rno:54239 UCSC:RGD:2350
GeneTree:ENSGT00620000087691 InParanoid:P12390 BindingDB:P12390
ChEMBL:CHEMBL3001 NextBio:610692 Genevestigator:P12390
GermOnline:ENSRNOG00000020778 Uniprot:P12390
Length = 500
Score = 907 (324.3 bits), Expect = 5.7e-91, P = 5.7e-91
Identities = 183/368 (49%), Positives = 245/368 (66%)
Query: 18 SLTFLVFSVIIAQGNDEAKRLYDDLL--SNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVN 75
SL +L V+ G D +RL + LL S YN+LIRP N S+ +TV++ + L+QLI V+
Sbjct: 14 SLLWLCSGVL---GTDTEERLVEHLLDPSRYNKLIRPATNGSELVTVQLMVSLAQLISVH 70
Query: 76 LKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPD 135
+ QIMTTNVW+ Q EWEDY+L W PE++ + + +PS+HIWLPD
Sbjct: 71 EREQIMTTNVWLTQ---------------EWEDYRLTWKPEDFDNMKKVRLPSKHIWLPD 115
Query: 136 IVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSW 195
+VLYNNADG YEV+ + A++ YDG + W PPAIYKS C+I+V++FPFD Q C MKF SW
Sbjct: 116 VVLYNNADGMYEVSFYSNAVVSYDGSIFWLPPAIYKSACKIEVKHFPFDQQNCTMKFRSW 175
Query: 196 TYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDI 255
TYD +DL +L K D+ L D+ S EWDI+ +P RNE + + Y DI
Sbjct: 176 TYDRTEIDL--VL------KSDVA-SLDDFTPSGEWDIIALPGRRNE---NPDDSTYVDI 223
Query: 256 IFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXA 315
++ +RRK LFYT+NLIIPCV I+ L++LVFYLPSD GEK++LC +
Sbjct: 224 TYDFIIRRKPLFYTINLIIPCVLITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLIS 283
Query: 316 EIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLP 375
+I+PPTSL VPL+GKYL+FTM+LVT S+V ++ VLNV+ RSP TH M PWV VF+E LP
Sbjct: 284 KIVPPTSLDVPLVGKYLMFTMVLVTFSIVTSVCVLNVHHRSPTTHTMAPWVKVVFLEKLP 343
Query: 376 KILFIQRP 383
+LF+Q+P
Sbjct: 344 TLLFLQQP 351
Score = 164 (62.8 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 495 ELPSKLARLASIHFCDLLTPIN--FLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIV 552
+L LA+L S+H + + N QEWEDY+L W PE++ + + +PS+HIWLPD+V
Sbjct: 58 QLMVSLAQLISVHEREQIMTTNVWLTQEWEDYRLTWKPEDFDNMKKVRLPSKHIWLPDVV 117
Query: 553 LYN 555
LYN
Sbjct: 118 LYN 120
>UNIPROTKB|P17787 [details] [associations]
symbol:CHRNB2 "Neuronal acetylcholine receptor subunit
beta-2" species:9606 "Homo sapiens" [GO:0030054 "cell junction"
evidence=IEA] [GO:0001661 "conditioned taste aversion"
evidence=IEA] [GO:0032226 "positive regulation of synaptic
transmission, dopaminergic" evidence=IEA] [GO:0045188 "regulation
of circadian sleep/wake cycle, non-REM sleep" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IDA;TAS] [GO:0015276 "ligand-gated ion channel activity"
evidence=TAS] [GO:0005892 "acetylcholine-gated channel complex"
evidence=IDA] [GO:0006811 "ion transport" evidence=NAS] [GO:0007165
"signal transduction" evidence=IDA] [GO:0015464 "acetylcholine
receptor activity" evidence=IDA] [GO:0001666 "response to hypoxia"
evidence=IDA] [GO:0035094 "response to nicotine" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=NAS] [GO:0008542
"visual learning" evidence=IMP] [GO:0006939 "smooth muscle
contraction" evidence=ISS] [GO:0007601 "visual perception"
evidence=ISS] [GO:0007605 "sensory perception of sound"
evidence=ISS] [GO:0008306 "associative learning" evidence=ISS]
[GO:0014059 "regulation of dopamine secretion" evidence=ISS]
[GO:0019233 "sensory perception of pain" evidence=ISS] [GO:0021562
"vestibulocochlear nerve development" evidence=ISS] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=ISS] [GO:0030890 "positive regulation of B cell
proliferation" evidence=ISS] [GO:0032225 "regulation of synaptic
transmission, dopaminergic" evidence=ISS] [GO:0033603 "positive
regulation of dopamine secretion" evidence=ISS] [GO:0042113 "B cell
activation" evidence=ISS] [GO:0042220 "response to cocaine"
evidence=ISS] [GO:0042320 "regulation of circadian sleep/wake
cycle, REM sleep" evidence=ISS] [GO:0045759 "negative regulation of
action potential" evidence=ISS] [GO:0051899 "membrane
depolarization" evidence=ISS] [GO:0051963 "regulation of synapse
assembly" evidence=ISS] [GO:0060084 "synaptic transmission involved
in micturition" evidence=ISS] [GO:0007271 "synaptic transmission,
cholinergic" evidence=ISS] [GO:0035095 "behavioral response to
nicotine" evidence=IMP] [GO:0050890 "cognition" evidence=IMP]
[GO:0042166 "acetylcholine binding" evidence=IC;IMP] [GO:0007613
"memory" evidence=IMP] [GO:0050877 "neurological system process"
evidence=IMP] [GO:0007612 "learning" evidence=IMP] [GO:0006816
"calcium ion transport" evidence=ISS] [GO:0009897 "external side of
plasma membrane" evidence=ISS] [GO:0021771 "lateral geniculate
nucleus development" evidence=ISS] [GO:0035176 "social behavior"
evidence=ISS] [GO:0045471 "response to ethanol" evidence=ISS]
[GO:0007626 "locomotory behavior" evidence=ISS] [GO:0021631 "optic
nerve morphogenesis" evidence=ISS] [GO:0042053 "regulation of
dopamine metabolic process" evidence=ISS] [GO:0048814 "regulation
of dendrite morphogenesis" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] Reactome:REACT_13685 InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0009897 GO:GO:0045471
GO:GO:0042220 GO:GO:0007613 GO:GO:0019233 GO:GO:0035095
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0033603
GO:GO:0007601 GO:GO:0001666 GO:GO:0008542 GO:GO:0007626
GO:GO:0007271 GO:GO:0048814 GO:GO:0042166 HOVERGEN:HBG003756
GO:GO:0004889 DrugBank:DB00184 eggNOG:NOG290206 GO:GO:0005892
GO:GO:0015464 Orphanet:98784 GO:GO:0060084 GO:GO:0042113
GO:GO:0006816 GO:GO:0051899 PDB:2GVT PDBsum:2GVT GO:GO:0032225
GO:GO:0007605 CTD:1141 KO:K04813 EMBL:X53179 EMBL:U62437
EMBL:Y08415 EMBL:AJ001935 EMBL:AJ001936 EMBL:AJ001937 EMBL:AJ001938
EMBL:AJ001939 EMBL:AF077186 EMBL:BC075040 EMBL:BC075041
IPI:IPI00016869 PIR:S10505 RefSeq:NP_000739.1 UniGene:Hs.2306
PDB:2K58 PDB:2K59 PDB:2KSR PDB:2LM2 PDBsum:2K58 PDBsum:2K59
PDBsum:2KSR PDBsum:2LM2 ProteinModelPortal:P17787 SMR:P17787
STRING:P17787 DMDM:113105 PRIDE:P17787 Ensembl:ENST00000368476
GeneID:1141 KEGG:hsa:1141 UCSC:uc001ffg.3 GeneCards:GC01P154540
HGNC:HGNC:1962 MIM:118507 MIM:605375 neXtProt:NX_P17787
PharmGKB:PA115 HOGENOM:HOG000006757 InParanoid:P17787 OMA:PRQNCAR
OrthoDB:EOG4HQDJ4 PhylomeDB:P17787 BindingDB:P17787
ChEMBL:CHEMBL1883 EvolutionaryTrace:P17787 GenomeRNAi:1141
NextBio:4748 ArrayExpress:P17787 Bgee:P17787 CleanEx:HS_CHRNB2
Genevestigator:P17787 GermOnline:ENSG00000160716 GO:GO:0021952
GO:GO:0001661 GO:GO:0021771 GO:GO:0045759 GO:GO:0021631
GO:GO:0030890 GO:GO:0032226 GO:GO:0045188 GO:GO:0042320
GO:GO:0042053 GO:GO:0051963 GO:GO:0006939 GO:GO:0035176
GO:GO:0021562 Uniprot:P17787
Length = 502
Score = 903 (322.9 bits), Expect = 1.5e-90, P = 1.5e-90
Identities = 179/355 (50%), Positives = 239/355 (67%)
Query: 31 GNDEAKRLYDDLL--SNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVN 88
G D +RL + LL S YN+LIRP N S+ +TV++ + L+QLI V+ + QIMTTNVW+
Sbjct: 25 GTDTEERLVEHLLDPSRYNKLIRPATNGSELVTVQLMVSLAQLISVHEREQIMTTNVWLT 84
Query: 89 QNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEV 148
Q EWEDY+L W PEE+ + + +PS+HIWLPD+VLYNNADG YEV
Sbjct: 85 Q---------------EWEDYRLTWKPEEFDNMKKVRLPSKHIWLPDVVLYNNADGMYEV 129
Query: 149 TIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHIL 208
+ + A++ YDG + W PPAIYKS C+I+V++FPFD Q C MKF SWTYD +DL +L
Sbjct: 130 SFYSNAVVSYDGSIFWLPPAIYKSACKIEVKHFPFDQQNCTMKFRSWTYDRTEIDL--VL 187
Query: 209 QGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFY 268
K ++ L D+ S EWDI+ +P RNE + + Y DI ++ +RRK LFY
Sbjct: 188 ------KSEVA-SLDDFTPSGEWDIVALPGRRNE---NPDDSTYVDITYDFIIRRKPLFY 237
Query: 269 TVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLL 328
T+NLIIPCV I+ L++LVFYLPSD GEK++LC ++I+PPTSL VPL+
Sbjct: 238 TINLIIPCVLITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLV 297
Query: 329 GKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
GKYL+FTM+LVT S+V ++ VLNV+ RSP TH M PWV VF+E LP +LF+Q+P
Sbjct: 298 GKYLMFTMVLVTFSIVTSVCVLNVHHRSPTTHTMAPWVKVVFLEKLPALLFMQQP 352
Score = 167 (63.8 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 30/63 (47%), Positives = 42/63 (66%)
Query: 495 ELPSKLARLASIHFCDLLTPIN--FLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIV 552
+L LA+L S+H + + N QEWEDY+L W PEE+ + + +PS+HIWLPD+V
Sbjct: 59 QLMVSLAQLISVHEREQIMTTNVWLTQEWEDYRLTWKPEEFDNMKKVRLPSKHIWLPDVV 118
Query: 553 LYN 555
LYN
Sbjct: 119 LYN 121
>UNIPROTKB|Q19AE5 [details] [associations]
symbol:CHRNB2 "Cholinergic receptor nicotinic beta 2"
species:9669 "Mustela putorius furo" [GO:0001666 "response to
hypoxia" evidence=ISS] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=ISS] [GO:0005892
"acetylcholine-gated channel complex" evidence=ISS] [GO:0007165
"signal transduction" evidence=ISS] [GO:0007613 "memory"
evidence=ISS] [GO:0008542 "visual learning" evidence=ISS]
[GO:0015464 "acetylcholine receptor activity" evidence=ISS]
[GO:0035095 "behavioral response to nicotine" evidence=ISS]
[GO:0042166 "acetylcholine binding" evidence=ISS] [GO:0050877
"neurological system process" evidence=ISS] [GO:0050890 "cognition"
evidence=ISS] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0007613 GO:GO:0035095 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0001666 GO:GO:0008542
GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889 GO:GO:0005892
GO:GO:0015464 EMBL:DQ533689 ProteinModelPortal:Q19AE5 SMR:Q19AE5
Uniprot:Q19AE5
Length = 478
Score = 903 (322.9 bits), Expect = 1.5e-90, P = 1.5e-90
Identities = 181/355 (50%), Positives = 238/355 (67%)
Query: 31 GNDEAKRLYDDLL--SNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVN 88
G D +RL + LL S YN+LIRP N S+ +TV++ + L+QLI V+ + QIMTTNVW+
Sbjct: 25 GTDTEERLVEHLLDPSRYNKLIRPAVNGSELVTVQLMVSLAQLISVHEREQIMTTNVWLT 84
Query: 89 QNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEV 148
Q EWEDY+L W PEE+ + + +PS+HIWLPD+VLYNNADG YEV
Sbjct: 85 Q---------------EWEDYRLTWKPEEFDNMKKVRLPSKHIWLPDVVLYNNADGMYEV 129
Query: 149 TIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHIL 208
+ + A++ YDG + W PPAIYKS C+I+V++FPFD Q C MKF SWTYD +DL +L
Sbjct: 130 SFYSNAVVSYDGSIFWLPPAIYKSACKIEVKHFPFDQQNCTMKFRSWTYDRTEIDL--VL 187
Query: 209 QGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFY 268
K D+ L D+ S EWDI+ +P RNE + + Y DI ++ +RRK LFY
Sbjct: 188 ------KSDVA-SLDDFTPSGEWDIVALPGRRNE---NPDDSTYVDITYDFVIRRKPLFY 237
Query: 269 TVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLL 328
T+NLIIPCV I+ L+VLVFYLPSD GEK++LC ++I+PPTSL VPL+
Sbjct: 238 TINLIIPCVLITSLAVLVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLV 297
Query: 329 GKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
GKYL+FTM+LVT S+V ++ VLNV+ RSP TH M PWV VF+E LP +LF+Q P
Sbjct: 298 GKYLMFTMVLVTFSIVTSVCVLNVHHRSPSTHTMAPWVKVVFLEKLPALLFMQPP 352
Score = 167 (63.8 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 30/63 (47%), Positives = 42/63 (66%)
Query: 495 ELPSKLARLASIHFCDLLTPIN--FLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIV 552
+L LA+L S+H + + N QEWEDY+L W PEE+ + + +PS+HIWLPD+V
Sbjct: 59 QLMVSLAQLISVHEREQIMTTNVWLTQEWEDYRLTWKPEEFDNMKKVRLPSKHIWLPDVV 118
Query: 553 LYN 555
LYN
Sbjct: 119 LYN 121
>ZFIN|ZDB-GENE-070821-3 [details] [associations]
symbol:chrnb2b "cholinergic receptor, nicotinic, beta
2b" species:7955 "Danio rerio" [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236
ZFIN:ZDB-GENE-070821-3 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087691 EMBL:BX950871 IPI:IPI00504047
Ensembl:ENSDART00000041625 Bgee:E7F4S7 Uniprot:E7F4S7
Length = 543
Score = 895 (320.1 bits), Expect = 1.1e-89, P = 1.1e-89
Identities = 177/366 (48%), Positives = 246/366 (67%)
Query: 21 FLVFSVIIA-QGNDEAKRLYDDLLS--NYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLK 77
F + +++ + G D +RL + LL+ +YN+LIRP N S+ +TV++ + L+QLI V+ +
Sbjct: 8 FCILAIVKSGYGADTEERLVEHLLNPAHYNKLIRPATNGSEVVTVQLMVSLAQLISVHER 67
Query: 78 NQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIV 137
QIMTTNVW+ Q EW+DY+L WSPEE+ G+ + +PS+HIWLPD+V
Sbjct: 68 EQIMTTNVWLTQ---------------EWQDYRLTWSPEEFDGMKKVRLPSKHIWLPDVV 112
Query: 138 LYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTY 197
LYNNADG YEV+ + A++ YDG V W PPAIYKS C+I+V++FPFD Q C + F SWTY
Sbjct: 113 LYNNADGMYEVSFYSNAVVSYDGSVFWLPPAIYKSACKIEVKHFPFDQQNCTLSFRSWTY 172
Query: 198 DGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIF 257
D VDL +L+ D+ + D+ S EWDI+ +P RNE + + Y DI +
Sbjct: 173 DRTEVDL--VLRA------DVA-SMDDFTPSGEWDIIALPGRRNE---NPSDPTYVDITY 220
Query: 258 NITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEI 317
+ +RRK LFYT+NLIIPCV I+ L++LVFYLPSD GEK++LC ++I
Sbjct: 221 DFIIRRKPLFYTINLIIPCVLITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKI 280
Query: 318 IPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKI 377
+PPTSL VPL+GKYL+FTM+LVT S+V ++ VLNV+ RSP TH M PWV VF+ LP +
Sbjct: 281 VPPTSLDVPLVGKYLMFTMVLVTFSIVTSVCVLNVHHRSPTTHTMPPWVKLVFLNKLPAL 340
Query: 378 LFIQRP 383
LF+++P
Sbjct: 341 LFMRQP 346
Score = 175 (66.7 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 37/88 (42%), Positives = 55/88 (62%)
Query: 473 VSPTFDNQMILMPRPLTWR---LPYELPSKLARLASIHFCDLLTPIN--FLQEWEDYKLK 527
++P N++I RP T + +L LA+L S+H + + N QEW+DY+L
Sbjct: 31 LNPAHYNKLI---RPATNGSEVVTVQLMVSLAQLISVHEREQIMTTNVWLTQEWQDYRLT 87
Query: 528 WSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
WSPEE+ G+ + +PS+HIWLPD+VLYN
Sbjct: 88 WSPEEFDGMKKVRLPSKHIWLPDVVLYN 115
>UNIPROTKB|F1LQT8 [details] [associations]
symbol:Chrna4 "Neuronal acetylcholine receptor subunit
alpha-4" species:10116 "Rattus norvegicus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 RGD:2346 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889 IPI:IPI00947675
Ensembl:ENSRNOT00000067051 ArrayExpress:F1LQT8 Uniprot:F1LQT8
Length = 629
Score = 870 (311.3 bits), Expect = 1.2e-89, Sum P(2) = 1.2e-89
Identities = 162/293 (55%), Positives = 204/293 (69%)
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
KNQ+MTTNVWV QEW DYKL+W P +Y V ++ +PSE IW PDIVLYNNADG++ VT +
Sbjct: 81 KNQMMTTNVWVKQEWHDYKLRWDPGDYENVTSIRIPSELIWRPDIVLYNNADGDFAVTHL 140
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
TKA L YDG+V W PPAIYKS C IDV +FPFD Q C MKFGSWTYD +DL
Sbjct: 141 TKAHLFYDGRVQWTPPAIYKSSCSIDVTFFPFDQQNCTMKFGSWTYDKAKIDLV------ 194
Query: 212 DSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVN 271
+ +D D++ S EW I+ N + Y CC E YPDI + +RR LFYT+N
Sbjct: 195 ---SMHSRVDQLDFWESGEWVIVDAVGTYNTRKYECCAEIYPDITYAFIIRRLPLFYTIN 251
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
LIIPC+ IS L+VLVFYLPS+ GEKV+LC EIIP TSL +PL+G+Y
Sbjct: 252 LIIPCLLISCLTVLVFYLPSECGEKVTLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEY 311
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRPA 384
LLFTMI VTLS+V+T+ VLNV+ RSP TH M WV +VF++++P++LF++RP+
Sbjct: 312 LLFTMIFVTLSIVITVFVLNVHHRSPRTHTMPAWVRRVFLDIVPRLLFMKRPS 364
Score = 499 (180.7 bits), Expect = 1.4e-50, Sum P(2) = 1.4e-50
Identities = 105/209 (50%), Positives = 130/209 (62%)
Query: 1 MTIFGPPRTAAMHVLFPSLTFLVFSVIIAQGNDEAK-----RLYDDLLSNYNRLIRPVGN 55
M I GP + +L P L L ++ A + E + RL L S YN+ RPV N
Sbjct: 1 MEIGGPGAPPPL-LLLPLLLLLGTGLLPASSHIETRAHAEERLLKRLFSGYNKWSRPVAN 59
Query: 56 NSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSP 115
SD + V+ GL ++QLI+V+ KNQ+MTTNVWV Q EW DYKL+W P
Sbjct: 60 ISDVVLVRFGLSIAQLIDVDEKNQMMTTNVWVKQ---------------EWHDYKLRWDP 104
Query: 116 EEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCE 175
+Y V ++ +PSE IW PDIVLYNNADG++ VT +TKA L YDG+V W PPAIYKS C
Sbjct: 105 GDYENVTSIRIPSELIWRPDIVLYNNADGDFAVTHLTKAHLFYDGRVQWTPPAIYKSSCS 164
Query: 176 IDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
IDV +FPFD Q C MKFGSWTYD +DL
Sbjct: 165 IDVTFFPFDQQNCTMKFGSWTYDKAKIDL 193
Score = 141 (54.7 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 23/37 (62%), Positives = 28/37 (75%)
Query: 519 QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
QEW DYKL+W P +Y V ++ +PSE IW PDIVLYN
Sbjct: 93 QEWHDYKLRWDPGDYENVTSIRIPSELIWRPDIVLYN 129
Score = 44 (20.5 bits), Expect = 1.2e-89, Sum P(2) = 1.2e-89
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 443 GDPLPISNLEADDIMFSPTSMCPPTQDGTDVSPTFDNQMILMP 485
G+P +S++ + +PT C PT + PT + + +P
Sbjct: 392 GEPGILSDICNQGLSPAPT-FCNPTDTAVETQPTCRSPPLEVP 433
>ZFIN|ZDB-GENE-041001-99 [details] [associations]
symbol:chrna2b "cholinergic receptor, nicotinic,
alpha polypeptide 2b (neuronal)" species:7955 "Danio rerio"
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236
ZFIN:ZDB-GENE-041001-99 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087732 EMBL:BX510657 IPI:IPI00491033
ProteinModelPortal:F1QFE7 Ensembl:ENSDART00000079613 Bgee:F1QFE7
Uniprot:F1QFE7
Length = 556
Score = 893 (319.4 bits), Expect = 1.7e-89, P = 1.7e-89
Identities = 168/293 (57%), Positives = 207/293 (70%)
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
KNQ+MTTNVW+ QEW DYKL+W P +Y V ++ VPSE IW+PDIVLYNNADG + VT M
Sbjct: 83 KNQMMTTNVWLKQEWNDYKLRWKPSDYDNVTSIRVPSELIWVPDIVLYNNADGEFAVTHM 142
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
TKA L + GKV W PPAIYKS C IDV +FPFD Q C MKFGSWTYD +DL
Sbjct: 143 TKAHLFHTGKVRWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDKAKIDL------- 195
Query: 212 DSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVN 271
++I+ +DL+DY+ S EW I+ N K Y CC E YPDI + +RR LFYT+N
Sbjct: 196 --ERIENTVDLKDYWESGEWAIINAVGTYNTKKYDCCHEIYPDITYFFIIRRLPLFYTIN 253
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
LIIPC+ IS L+VLVFYLPSD GEK++LC EIIP TSL +PL+G+Y
Sbjct: 254 LIIPCLLISCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEY 313
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRPA 384
LLFTMI VTLS+V+T+ VLNV+ RSP TH M WVH VF++++P+ LF++RPA
Sbjct: 314 LLFTMIFVTLSIVITVFVLNVHHRSPSTHKMPCWVHSVFLDLIPRWLFMRRPA 366
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 106/205 (51%), Positives = 127/205 (61%)
Query: 3 IFGPPRTAAMHVLFPSLTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTV 62
IF P +H+ PSL L S + L+ L YN+ RPV N SD + V
Sbjct: 12 IFTVP-VLLVHLSGPSL--LTVSCCEKTHSHAEDELFKKLFDGYNKWSRPVPNTSDVVIV 68
Query: 63 KMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVD 122
K GL ++QLI+V+ KNQ+MTTNVW LK QEW DYKL+W P +Y V
Sbjct: 69 KFGLSIAQLIDVDEKNQMMTTNVW----LK-----------QEWNDYKLRWKPSDYDNVT 113
Query: 123 TLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFP 182
++ VPSE IW+PDIVLYNNADG + VT MTKA L + GKV W PPAIYKS C IDV +FP
Sbjct: 114 SIRVPSELIWVPDIVLYNNADGEFAVTHMTKAHLFHTGKVRWVPPAIYKSSCSIDVTFFP 173
Query: 183 FDVQTCVMKFGSWTYDGYTVDLKHI 207
FD Q C MKFGSWTYD +DL+ I
Sbjct: 174 FDQQNCKMKFGSWTYDKAKIDLERI 198
Score = 149 (57.5 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 25/45 (55%), Positives = 32/45 (71%)
Query: 511 LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+ T + QEW DYKL+W P +Y V ++ VPSE IW+PDIVLYN
Sbjct: 87 MTTNVWLKQEWNDYKLRWKPSDYDNVTSIRVPSELIWVPDIVLYN 131
>UNIPROTKB|Q5IS77 [details] [associations]
symbol:CHRNA4 "Neuronal acetylcholine receptor subunit
alpha-4" species:9598 "Pan troglodytes" [GO:0001666 "response to
hypoxia" evidence=ISS] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=ISS] [GO:0005892
"acetylcholine-gated channel complex" evidence=ISS] [GO:0006281
"DNA repair" evidence=ISS] [GO:0006979 "response to oxidative
stress" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] [GO:0015464 "acetylcholine receptor activity"
evidence=ISS] [GO:0035095 "behavioral response to nicotine"
evidence=ISS] [GO:0050877 "neurological system process"
evidence=ISS] [GO:0050890 "cognition" evidence=ISS]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0006979
GO:GO:0035095 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0050890 GO:GO:0006281 GO:GO:0001666
HOVERGEN:HBG003756 GO:GO:0004889 HOGENOM:HOG000006756
eggNOG:NOG290206 GO:GO:0005892 GO:GO:0015464 CTD:1137 KO:K04806
EMBL:AY665251 RefSeq:NP_001029286.1 UniGene:Ptr.6176
ProteinModelPortal:Q5IS77 SMR:Q5IS77 GeneID:469999 KEGG:ptr:469999
NextBio:20847316 Uniprot:Q5IS77
Length = 627
Score = 861 (308.1 bits), Expect = 6.3e-89, Sum P(2) = 6.3e-89
Identities = 159/293 (54%), Positives = 204/293 (69%)
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
KNQ+MTTNVWV QEW DYKL+W P +Y V ++ +PSE IW PDIVLYNNADG++ VT +
Sbjct: 79 KNQMMTTNVWVKQEWHDYKLRWDPADYENVTSIRIPSELIWRPDIVLYNNADGDFAVTHL 138
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
TKA L +DG+V W PPAIYKS C IDV +FPFD Q C MKFGSWTYD +DL ++
Sbjct: 139 TKAHLFHDGRVQWTPPAIYKSSCSIDVTFFPFDQQNCTMKFGSWTYDKAKIDLVNMHSR- 197
Query: 212 DSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVN 271
+D D++ S EW I+ N + Y CC E YPDI + +RR LFYT+N
Sbjct: 198 --------VDQLDFWESGEWVIVDAVGTYNTRKYECCAEIYPDITYAFVIRRLPLFYTIN 249
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
LIIPC+ IS L+VLVFYLPS+ GEK++LC EIIP TSL +PL+G+Y
Sbjct: 250 LIIPCLLISCLTVLVFYLPSECGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEY 309
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRPA 384
LLFTMI VTLS+V+T+ VLNV+ RSP TH M WV +VF++++P++L ++RP+
Sbjct: 310 LLFTMIFVTLSIVITVFVLNVHHRSPRTHTMPTWVRRVFLDIVPRLLLMKRPS 362
Score = 492 (178.3 bits), Expect = 4.7e-50, Sum P(2) = 4.7e-50
Identities = 104/209 (49%), Positives = 130/209 (62%)
Query: 1 MTIFGPPRTAAMHVLFPSLTFLVFSVIIAQGNDEAK-----RLYDDLLSNYNRLIRPVGN 55
M + GP A +L P L L ++ A + E + RL L S YN+ RPV N
Sbjct: 1 MELGGP---GAPRLLPPLLLLLGTGLLRASSHVETRAHAEERLLKKLFSGYNKWSRPVAN 57
Query: 56 NSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSP 115
SD + V+ GL ++QLI+V+ KNQ+MTTNVWV Q EW DYKL+W P
Sbjct: 58 ISDVVLVRFGLSIAQLIDVDEKNQMMTTNVWVKQ---------------EWHDYKLRWDP 102
Query: 116 EEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCE 175
+Y V ++ +PSE IW PDIVLYNNADG++ VT +TKA L +DG+V W PPAIYKS C
Sbjct: 103 ADYENVTSIRIPSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQWTPPAIYKSSCS 162
Query: 176 IDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
IDV +FPFD Q C MKFGSWTYD +DL
Sbjct: 163 IDVTFFPFDQQNCTMKFGSWTYDKAKIDL 191
Score = 142 (55.0 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 23/37 (62%), Positives = 28/37 (75%)
Query: 519 QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
QEW DYKL+W P +Y V ++ +PSE IW PDIVLYN
Sbjct: 91 QEWHDYKLRWDPADYENVTSIRIPSELIWRPDIVLYN 127
Score = 46 (21.3 bits), Expect = 6.3e-89, Sum P(2) = 6.3e-89
Identities = 22/82 (26%), Positives = 33/82 (40%)
Query: 471 TDVSPTFDNQMIL--MPRPLTWRLPYELPSKLARLA-SIHFCDLLTPINFLQEWEDYKLK 527
T PT+ ++ L +PR L + P + RL S+H + + F E E
Sbjct: 337 THTMPTWVRRVFLDIVPRLLLMKRPSVVKDNCRRLIESMH--KMASAPRFWPEPEG---- 390
Query: 528 WSPEEYGGVDTLHVPSEHIWLP 549
P G +LH PS +P
Sbjct: 391 -EPPATSGTQSLHPPSPSFCIP 411
>UNIPROTKB|P43681 [details] [associations]
symbol:CHRNA4 "Neuronal acetylcholine receptor subunit
alpha-4" species:9606 "Homo sapiens" [GO:0030054 "cell junction"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IDA;TAS] [GO:0015276 "ligand-gated ion channel activity"
evidence=TAS] [GO:0005892 "acetylcholine-gated channel complex"
evidence=IDA] [GO:0006811 "ion transport" evidence=NAS] [GO:0007165
"signal transduction" evidence=IDA] [GO:0015464 "acetylcholine
receptor activity" evidence=IDA] [GO:0035094 "response to nicotine"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=NAS]
[GO:0050877 "neurological system process" evidence=IMP] [GO:0030425
"dendrite" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0006281 "DNA repair" evidence=IMP] [GO:0006979
"response to oxidative stress" evidence=IMP] [GO:0007268 "synaptic
transmission" evidence=NAS;TAS] [GO:0001666 "response to hypoxia"
evidence=IDA] [GO:0001508 "regulation of action potential"
evidence=ISS] [GO:0016020 "membrane" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISS;TAS] [GO:0006816 "calcium ion
transport" evidence=ISS] [GO:0007271 "synaptic transmission,
cholinergic" evidence=ISS] [GO:0009897 "external side of plasma
membrane" evidence=ISS] [GO:0014059 "regulation of dopamine
secretion" evidence=ISS] [GO:0019233 "sensory perception of pain"
evidence=ISS] [GO:0042113 "B cell activation" evidence=ISS]
[GO:0042391 "regulation of membrane potential" evidence=ISS]
[GO:0051899 "membrane depolarization" evidence=ISS] [GO:0060080
"regulation of inhibitory postsynaptic membrane potential"
evidence=ISS] [GO:0042166 "acetylcholine binding" evidence=IC]
[GO:0035095 "behavioral response to nicotine" evidence=IMP]
[GO:0050890 "cognition" evidence=IMP] Reactome:REACT_13685
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0006979
GO:GO:0009897 GO:GO:0014059 GO:GO:0019233 GO:GO:0035095
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0043025
GO:GO:0050890 GO:GO:0030425 GO:GO:0006281 GO:GO:0001666
GO:GO:0007626 GO:GO:0060080 GO:GO:0007271 GO:GO:0042166
HOVERGEN:HBG003756 GO:GO:0004889 HOGENOM:HOG000006756
DrugBank:DB00184 eggNOG:NOG290206 GO:GO:0005892 GO:GO:0015464
GO:GO:0001508 Orphanet:98784 OrthoDB:EOG480HWN CTD:1137 KO:K04806
GO:GO:0042113 GO:GO:0006816 GO:GO:0051899 EMBL:L35901 EMBL:X89741
EMBL:X89742 EMBL:X89743 EMBL:X89744 EMBL:X89745 EMBL:X89746
EMBL:U62433 EMBL:Y08421 EMBL:DQ093071 EMBL:AL121827 EMBL:BC096290
EMBL:X87629 IPI:IPI00020036 PIR:JC4021 RefSeq:NP_000735.1
RefSeq:NP_001243502.1 UniGene:Hs.10734 PDB:2GVT PDB:2LLY
PDBsum:2GVT PDBsum:2LLY ProteinModelPortal:P43681 SMR:P43681
STRING:P43681 PhosphoSite:P43681 DMDM:1351848 PaxDb:P43681
PRIDE:P43681 Ensembl:ENST00000370263 GeneID:1137 KEGG:hsa:1137
UCSC:uc002yes.2 GeneCards:GC20M061974 HGNC:HGNC:1958 HPA:CAB034064
MIM:118504 MIM:600513 neXtProt:NX_P43681 PharmGKB:PA26490
InParanoid:P43681 OMA:VQHMSSP PhylomeDB:P43681 BindingDB:P43681
ChEMBL:CHEMBL1882 DrugBank:DB01273 GenomeRNAi:1137 NextBio:4730
ArrayExpress:P43681 Bgee:P43681 CleanEx:HS_CHRNA4
Genevestigator:P43681 GermOnline:ENSG00000101204 Uniprot:P43681
Length = 627
Score = 861 (308.1 bits), Expect = 8.0e-89, Sum P(2) = 8.0e-89
Identities = 159/293 (54%), Positives = 204/293 (69%)
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
KNQ+MTTNVWV QEW DYKL+W P +Y V ++ +PSE IW PDIVLYNNADG++ VT +
Sbjct: 79 KNQMMTTNVWVKQEWHDYKLRWDPADYENVTSIRIPSELIWRPDIVLYNNADGDFAVTHL 138
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
TKA L +DG+V W PPAIYKS C IDV +FPFD Q C MKFGSWTYD +DL ++
Sbjct: 139 TKAHLFHDGRVQWTPPAIYKSSCSIDVTFFPFDQQNCTMKFGSWTYDKAKIDLVNMHSR- 197
Query: 212 DSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVN 271
+D D++ S EW I+ N + Y CC E YPDI + +RR LFYT+N
Sbjct: 198 --------VDQLDFWESGEWVIVDAVGTYNTRKYECCAEIYPDITYAFVIRRLPLFYTIN 249
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
LIIPC+ IS L+VLVFYLPS+ GEK++LC EIIP TSL +PL+G+Y
Sbjct: 250 LIIPCLLISCLTVLVFYLPSECGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEY 309
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRPA 384
LLFTMI VTLS+V+T+ VLNV+ RSP TH M WV +VF++++P++L ++RP+
Sbjct: 310 LLFTMIFVTLSIVITVFVLNVHHRSPRTHTMPTWVRRVFLDIVPRLLLMKRPS 362
Score = 492 (178.3 bits), Expect = 6.0e-50, Sum P(2) = 6.0e-50
Identities = 104/209 (49%), Positives = 130/209 (62%)
Query: 1 MTIFGPPRTAAMHVLFPSLTFLVFSVIIAQGNDEAK-----RLYDDLLSNYNRLIRPVGN 55
M + GP A +L P L L ++ A + E + RL L S YN+ RPV N
Sbjct: 1 MELGGP---GAPRLLPPLLLLLGTGLLRASSHVETRAHAEERLLKKLFSGYNKWSRPVAN 57
Query: 56 NSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSP 115
SD + V+ GL ++QLI+V+ KNQ+MTTNVWV Q EW DYKL+W P
Sbjct: 58 ISDVVLVRFGLSIAQLIDVDEKNQMMTTNVWVKQ---------------EWHDYKLRWDP 102
Query: 116 EEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCE 175
+Y V ++ +PSE IW PDIVLYNNADG++ VT +TKA L +DG+V W PPAIYKS C
Sbjct: 103 ADYENVTSIRIPSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQWTPPAIYKSSCS 162
Query: 176 IDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
IDV +FPFD Q C MKFGSWTYD +DL
Sbjct: 163 IDVTFFPFDQQNCTMKFGSWTYDKAKIDL 191
Score = 142 (55.0 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 23/37 (62%), Positives = 28/37 (75%)
Query: 519 QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
QEW DYKL+W P +Y V ++ +PSE IW PDIVLYN
Sbjct: 91 QEWHDYKLRWDPADYENVTSIRIPSELIWRPDIVLYN 127
Score = 45 (20.9 bits), Expect = 8.0e-89, Sum P(2) = 8.0e-89
Identities = 22/82 (26%), Positives = 33/82 (40%)
Query: 471 TDVSPTFDNQMIL--MPRPLTWRLPYELPSKLARLA-SIHFCDLLTPINFLQEWEDYKLK 527
T PT+ ++ L +PR L + P + RL S+H + + F E E
Sbjct: 337 THTMPTWVRRVFLDIVPRLLLMKRPSVVKDNCRRLIESMH--KMASAPRFWPEPEG---- 390
Query: 528 WSPEEYGGVDTLHVPSEHIWLP 549
P G +LH PS +P
Sbjct: 391 -EPPATSGTQSLHPPSPSFCVP 411
>UNIPROTKB|P26153 [details] [associations]
symbol:CHRNB4 "Neuronal acetylcholine receptor subunit
beta-4" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
eggNOG:NOG290206 HOGENOM:HOG000006757 EMBL:J05643 IPI:IPI00580226
PIR:A39218 UniGene:Gga.341 ProteinModelPortal:P26153 SMR:P26153
Uniprot:P26153
Length = 470
Score = 867 (310.3 bits), Expect = 1.0e-88, Sum P(2) = 1.0e-88
Identities = 171/353 (48%), Positives = 236/353 (66%)
Query: 33 DEAKRLYDDLLS--NYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQN 90
D ++L + LLS YN+LIRP N+S +++++ + L+QLI VN + QIMTTNVW+NQ
Sbjct: 5 DAEEKLMNHLLSPDRYNKLIRPAVNSSQLVSIELQVSLAQLISVNEREQIMTTNVWLNQ- 63
Query: 91 LKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTI 150
EW DY+L W P +Y G++ L +P++HIWLPDIVLYNNADG YEV++
Sbjct: 64 --------------EWIDYRLAWKPSDYEGINMLRIPAKHIWLPDIVLYNNADGTYEVSL 109
Query: 151 MTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQG 210
T AI+ +G + W PPAIYKS C+I+V++FPFD Q C +KF SWTYD +D+ +L
Sbjct: 110 YTNAIVQNNGSIRWLPPAIYKSACKIEVKHFPFDQQNCTLKFRSWTYDHTEIDM--VL-- 165
Query: 211 PDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTV 270
K + + D+ S EWDI+ +P R E + + Y D+ ++ ++RK LFYT+
Sbjct: 166 ----KTSMA-SMDDFTPSGEWDIVALPGRRTE---NPLDPNYVDVTYDFIIKRKPLFYTI 217
Query: 271 NLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGK 330
NLIIPCV I+ L++LVFYLPSD GEK++LC ++I+PPTSL VPL+GK
Sbjct: 218 NLIIPCVLITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLIGK 277
Query: 331 YLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
YL+FTM+LVT S+V ++ VLNV+ RSP TH M PWV VF+E LP LF++RP
Sbjct: 278 YLMFTMVLVTFSIVTSVCVLNVHHRSPSTHTMPPWVKLVFLERLPAYLFMKRP 330
Score = 165 (63.1 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 35/85 (41%), Positives = 53/85 (62%)
Query: 473 VSPTFDNQMILMPRPLTWRLPYELPSKLARLASIHFCDLLTPIN-FL-QEWEDYKLKWSP 530
+SP N++I + + EL LA+L S++ + + N +L QEW DY+L W P
Sbjct: 15 LSPDRYNKLIRPAVNSSQLVSIELQVSLAQLISVNEREQIMTTNVWLNQEWIDYRLAWKP 74
Query: 531 EEYGGVDTLHVPSEHIWLPDIVLYN 555
+Y G++ L +P++HIWLPDIVLYN
Sbjct: 75 SDYEGINMLRIPAKHIWLPDIVLYN 99
Score = 38 (18.4 bits), Expect = 1.0e-88, Sum P(2) = 1.0e-88
Identities = 16/82 (19%), Positives = 32/82 (39%)
Query: 466 PTQDGTDVSPTFDNQMILMPRPLTWRLPYELPSKLARLASIHFCDLLTPINFLQEWE-DY 524
P Q + T + + P Y + + A+ + D L ++ Q++
Sbjct: 335 PRQKPANCKKTRAENLCMDPADFYKNSTYFVNTASAKKYDMKITDTLDNVSSHQDFRLRT 394
Query: 525 KLKWSPEEYGGVDTLHVPSEHI 546
K+SPE +D + +EH+
Sbjct: 395 GTKFSPEVQEAIDGVSFIAEHM 416
>UNIPROTKB|Q07263 [details] [associations]
symbol:CHRNA3 "Neuronal acetylcholine receptor subunit
alpha-3" species:9913 "Bos taurus" [GO:0035095 "behavioral response
to nicotine" evidence=ISS] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=ISS] [GO:0060084
"synaptic transmission involved in micturition" evidence=ISS]
[GO:0015464 "acetylcholine receptor activity" evidence=ISS]
[GO:0007399 "nervous system development" evidence=ISS] [GO:0007165
"signal transduction" evidence=ISS] [GO:0005892
"acetylcholine-gated channel complex" evidence=ISS] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0007399 GO:GO:0035095 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 eggNOG:NOG290206 GO:GO:0005892 GO:GO:0015464
EMBL:X57032 IPI:IPI00969668 PIR:S60589 RefSeq:NP_777144.1
UniGene:Bt.63828 ProteinModelPortal:Q07263 SMR:Q07263 GeneID:282702
KEGG:bta:282702 CTD:1136 KO:K04805 ChEMBL:CHEMBL5317
NextBio:20806362 GO:GO:0060084 Uniprot:Q07263
Length = 495
Score = 883 (315.9 bits), Expect = 2.0e-88, P = 2.0e-88
Identities = 171/346 (49%), Positives = 236/346 (68%)
Query: 49 LIRPVGNNSD---KLTVKMGLKLSQLIE--VNLKNQIMTT-NVWVNQNLK----NQIMTT 98
L+ PV + SD +L ++ +++I N+ + ++ V ++Q +K NQIM T
Sbjct: 14 LLLPVASTSDAEHRLFERLFEDYNEIIRPVANVSDPVIIQFEVSMSQLVKVDEVNQIMET 73
Query: 99 NVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHY 158
N+W+ Q W DYKLKW+P +Y G + + VP+E IW PDIVLYNNA G+++V TKA+L Y
Sbjct: 74 NLWLKQIWNDYKLKWNPSDYDGAEFMRVPAEKIWKPDIVLYNNAVGDFQVDDKTKALLKY 133
Query: 159 DGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSDKIDI 218
G+V W PPAI+KS C+IDV YFPFD Q C MKFGSW+YD +DL +L G
Sbjct: 134 TGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDL--VLIGSS------ 185
Query: 219 GIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLIIPCVG 278
++L+DY+ S EW I+K P +++ Y+CCEE YPDI +++ +RR LFYT+NLIIPC+
Sbjct: 186 -MNLKDYWESGEWAIIKAPGYKHDIKYNCCEEIYPDITYSLYIRRLPLFYTINLIIPCLL 244
Query: 279 ISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLFTMIL 338
ISFL+VLVFYLPSD GEKV+LC E IP TSL +PL+G+YLLFTMI
Sbjct: 245 ISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIF 304
Query: 339 VTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRPA 384
VTLS+V+T+ VLNV++R+P TH M WV +F+ +LP+++F+ RPA
Sbjct: 305 VTLSIVITVFVLNVHYRTPTTHTMPAWVKTIFLNLLPRVMFMTRPA 350
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 88/183 (48%), Positives = 122/183 (66%)
Query: 22 LVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIM 81
L+ + +A +D RL++ L +YN +IRPV N SD + ++ + +SQL++V+ ++
Sbjct: 12 LLLLLPVASTSDAEHRLFERLFEDYNEIIRPVANVSDPVIIQFEVSMSQLVKVD---EV- 67
Query: 82 TTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNN 141
NQIM TN+W+ Q W DYKLKW+P +Y G + + VP+E IW PDIVLYNN
Sbjct: 68 -----------NQIMETNLWLKQIWNDYKLKWNPSDYDGAEFMRVPAEKIWKPDIVLYNN 116
Query: 142 ADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYT 201
A G+++V TKA+L Y G+V W PPAI+KS C+IDV YFPFD Q C MKFGSW+YD
Sbjct: 117 AVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAK 176
Query: 202 VDL 204
+DL
Sbjct: 177 IDL 179
Score = 142 (55.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 23/37 (62%), Positives = 28/37 (75%)
Query: 519 QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
Q W DYKLKW+P +Y G + + VP+E IW PDIVLYN
Sbjct: 79 QIWNDYKLKWNPSDYDGAEFMRVPAEKIWKPDIVLYN 115
>RGD|2345 [details] [associations]
symbol:Chrna3 "cholinergic receptor, nicotinic, alpha 3 (neuronal)"
species:10116 "Rattus norvegicus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISO;IMP] [GO:0005892 "acetylcholine-gated channel complex"
evidence=ISO;IDA;TAS] [GO:0006812 "cation transport" evidence=ISO]
[GO:0006937 "regulation of muscle contraction" evidence=ISO]
[GO:0006940 "regulation of smooth muscle contraction" evidence=ISO]
[GO:0007165 "signal transduction" evidence=ISO] [GO:0007171
"activation of transmembrane receptor protein tyrosine kinase
activity" evidence=ISO] [GO:0007271 "synaptic transmission,
cholinergic" evidence=ISO] [GO:0007399 "nervous system development"
evidence=ISO] [GO:0007507 "heart development" evidence=IEP]
[GO:0007626 "locomotory behavior" evidence=ISO] [GO:0008144 "drug
binding" evidence=IDA] [GO:0010035 "response to inorganic substance"
evidence=IEP] [GO:0014056 "regulation of acetylcholine secretion"
evidence=ISO] [GO:0014069 "postsynaptic density" evidence=IDA]
[GO:0015464 "acetylcholine receptor activity" evidence=ISO;IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=IDA] [GO:0034220 "ion
transmembrane transport" evidence=ISO] [GO:0035094 "response to
nicotine" evidence=IEP] [GO:0035095 "behavioral response to nicotine"
evidence=ISO] [GO:0042166 "acetylcholine binding" evidence=IDA]
[GO:0042391 "regulation of membrane potential" evidence=ISO]
[GO:0042493 "response to drug" evidence=IDA] [GO:0043025 "neuronal
cell body" evidence=IDA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0048814 "regulation of dendrite morphogenesis"
evidence=ISO] [GO:0051291 "protein heterooligomerization"
evidence=IDA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=ISO] [GO:0060084 "synaptic transmission
involved in micturition" evidence=ISO] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 RGD:2345 GO:GO:0014069 GO:GO:0007507
GO:GO:0042493 GO:GO:0035095 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0043025 GO:GO:0060079 GO:GO:0007626
GO:GO:0007271 GO:GO:0048814 GO:GO:0042166 HOVERGEN:HBG003756
GO:GO:0004889 HOGENOM:HOG000006756 eggNOG:NOG290206 GO:GO:0005892
GO:GO:0015464 GO:GO:0060084 GO:GO:0007171 GO:GO:0014056 GO:GO:0006940
GO:GO:0010035 EMBL:X03440 EMBL:L31621 EMBL:U04961 IPI:IPI00198781
PIR:A24572 PIR:A53733 UniGene:Rn.10996 PDB:1OLF PDB:1OLJ PDBsum:1OLF
PDBsum:1OLJ ProteinModelPortal:P04757 SMR:P04757 STRING:P04757
PhosphoSite:P04757 PRIDE:P04757 UCSC:RGD:2345 InParanoid:P04757
OrthoDB:EOG45B1FG BindingDB:P04757 ChEMBL:CHEMBL3818
ArrayExpress:P04757 Genevestigator:P04757
GermOnline:ENSRNOG00000013829 GO:GO:0035094 Uniprot:P04757
Length = 499
Score = 881 (315.2 bits), Expect = 3.2e-88, P = 3.2e-88
Identities = 162/291 (55%), Positives = 209/291 (71%)
Query: 93 NQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMT 152
NQIM TN+W+ Q W DYKLKW P +Y GV+ + VP+E IW PDIVLYNNADG+++V T
Sbjct: 72 NQIMETNLWLKQIWNDYKLKWKPSDYQGVEFMRVPAEKIWKPDIVLYNNADGDFQVDDKT 131
Query: 153 KAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPD 212
KA+L Y G+V W PPAI+KS C+IDV YFPFD Q C MKFGSW+YD +DL +L G
Sbjct: 132 KALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDL--VLIGSS 189
Query: 213 SDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNL 272
++L+DY+ S EW I+K P ++E Y+CCEE Y DI +++ +RR LFYT+NL
Sbjct: 190 -------MNLKDYWESGEWAIIKAPGYKHEIKYNCCEEIYQDITYSLYIRRLPLFYTINL 242
Query: 273 IIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYL 332
IIPC+ ISFL+VLVFYLPSD GEKV+LC E IP TSL +PL+G+YL
Sbjct: 243 IIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYL 302
Query: 333 LFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
LFTMI VTLS+V+T+ VLNV++R+P TH M WV VF+ +LP+++F+ RP
Sbjct: 303 LFTMIFVTLSIVITVFVLNVHYRTPTTHTMPTWVKAVFLNLLPRVMFMTRP 353
Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 95/195 (48%), Positives = 127/195 (65%)
Query: 14 VLFP---SLTFLVFSVIIAQGNDEAK-RLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLS 69
VL P S+ LV ++ A EA+ RL+ L +YN +IRPV N S + ++ + +S
Sbjct: 4 VLLPPPLSMLMLVLMLLPAASASEAEHRLFQYLFEDYNEIIRPVANVSHPVIIQFEVSMS 63
Query: 70 QLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSE 129
QL++V+ ++ NQIM TN+W+ Q W DYKLKW P +Y GV+ + VP+E
Sbjct: 64 QLVKVD---EV------------NQIMETNLWLKQIWNDYKLKWKPSDYQGVEFMRVPAE 108
Query: 130 HIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCV 189
IW PDIVLYNNADG+++V TKA+L Y G+V W PPAI+KS C+IDV YFPFD Q C
Sbjct: 109 KIWKPDIVLYNNADGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCT 168
Query: 190 MKFGSWTYDGYTVDL 204
MKFGSW+YD +DL
Sbjct: 169 MKFGSWSYDKAKIDL 183
Score = 144 (55.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 24/37 (64%), Positives = 28/37 (75%)
Query: 519 QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
Q W DYKLKW P +Y GV+ + VP+E IW PDIVLYN
Sbjct: 83 QIWNDYKLKWKPSDYQGVEFMRVPAEKIWKPDIVLYN 119
>UNIPROTKB|F1M7K6 [details] [associations]
symbol:Chrna3 "Neuronal acetylcholine receptor subunit
alpha-3" species:10116 "Rattus norvegicus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005892 "acetylcholine-gated channel complex"
evidence=IEA] [GO:0006940 "regulation of smooth muscle contraction"
evidence=IEA] [GO:0007171 "activation of transmembrane receptor
protein tyrosine kinase activity" evidence=IEA] [GO:0007271
"synaptic transmission, cholinergic" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0014056 "regulation of
acetylcholine secretion" evidence=IEA] [GO:0015464 "acetylcholine
receptor activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0035095 "behavioral response to nicotine"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IEA]
[GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA] [GO:0060084 "synaptic transmission
involved in micturition" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 RGD:2345 GO:GO:0035095 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0060079 GO:GO:0007626
GO:GO:0007271 GO:GO:0048814 GO:GO:0004889 GO:GO:0005892
GO:GO:0015464 GeneTree:ENSGT00620000087732 GO:GO:0060084
GO:GO:0007171 GO:GO:0014056 GO:GO:0006940 IPI:IPI00198781
OMA:LMARDDT Ensembl:ENSRNOT00000019307 ArrayExpress:F1M7K6
Uniprot:F1M7K6
Length = 503
Score = 881 (315.2 bits), Expect = 3.2e-88, P = 3.2e-88
Identities = 162/291 (55%), Positives = 209/291 (71%)
Query: 93 NQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMT 152
NQIM TN+W+ Q W DYKLKW P +Y GV+ + VP+E IW PDIVLYNNADG+++V T
Sbjct: 76 NQIMETNLWLKQIWNDYKLKWKPSDYQGVEFMRVPAEKIWKPDIVLYNNADGDFQVDDKT 135
Query: 153 KAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPD 212
KA+L Y G+V W PPAI+KS C+IDV YFPFD Q C MKFGSW+YD +DL +L G
Sbjct: 136 KALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDL--VLIGSS 193
Query: 213 SDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNL 272
++L+DY+ S EW I+K P ++E Y+CCEE Y DI +++ +RR LFYT+NL
Sbjct: 194 -------MNLKDYWESGEWAIIKAPGYKHEIKYNCCEEIYQDITYSLYIRRLPLFYTINL 246
Query: 273 IIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYL 332
IIPC+ ISFL+VLVFYLPSD GEKV+LC E IP TSL +PL+G+YL
Sbjct: 247 IIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYL 306
Query: 333 LFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
LFTMI VTLS+V+T+ VLNV++R+P TH M WV VF+ +LP+++F+ RP
Sbjct: 307 LFTMIFVTLSIVITVFVLNVHYRTPTTHTMPTWVKAVFLNLLPRVMFMTRP 357
Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 95/195 (48%), Positives = 127/195 (65%)
Query: 14 VLFP---SLTFLVFSVIIAQGNDEAK-RLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLS 69
VL P S+ LV ++ A EA+ RL+ L +YN +IRPV N S + ++ + +S
Sbjct: 8 VLLPPPLSMLMLVLMLLPAASASEAEHRLFQYLFEDYNEIIRPVANVSHPVIIQFEVSMS 67
Query: 70 QLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSE 129
QL++V+ ++ NQIM TN+W+ Q W DYKLKW P +Y GV+ + VP+E
Sbjct: 68 QLVKVD---EV------------NQIMETNLWLKQIWNDYKLKWKPSDYQGVEFMRVPAE 112
Query: 130 HIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCV 189
IW PDIVLYNNADG+++V TKA+L Y G+V W PPAI+KS C+IDV YFPFD Q C
Sbjct: 113 KIWKPDIVLYNNADGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCT 172
Query: 190 MKFGSWTYDGYTVDL 204
MKFGSW+YD +DL
Sbjct: 173 MKFGSWSYDKAKIDL 187
Score = 144 (55.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 24/37 (64%), Positives = 28/37 (75%)
Query: 519 QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
Q W DYKLKW P +Y GV+ + VP+E IW PDIVLYN
Sbjct: 87 QIWNDYKLKWKPSDYQGVEFMRVPAEKIWKPDIVLYN 123
>MGI|MGI:87887 [details] [associations]
symbol:Chrna3 "cholinergic receptor, nicotinic, alpha
polypeptide 3" species:10090 "Mus musculus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISO;IMP] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005892
"acetylcholine-gated channel complex" evidence=ISO;IPI] [GO:0006810
"transport" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0006812 "cation transport" evidence=IMP] [GO:0006937
"regulation of muscle contraction" evidence=IMP] [GO:0006940
"regulation of smooth muscle contraction" evidence=IMP] [GO:0007165
"signal transduction" evidence=ISO] [GO:0007171 "activation of
transmembrane receptor protein tyrosine kinase activity"
evidence=IMP] [GO:0007271 "synaptic transmission, cholinergic"
evidence=IMP] [GO:0007399 "nervous system development"
evidence=ISO] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0008144 "drug binding" evidence=ISO] [GO:0014056 "regulation of
acetylcholine secretion" evidence=IMP] [GO:0014069 "postsynaptic
density" evidence=ISO] [GO:0015464 "acetylcholine receptor
activity" evidence=ISO] [GO:0016020 "membrane" evidence=ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030425 "dendrite" evidence=ISO]
[GO:0034220 "ion transmembrane transport" evidence=IMP] [GO:0035095
"behavioral response to nicotine" evidence=ISO;IMP] [GO:0042166
"acetylcholine binding" evidence=ISO] [GO:0042391 "regulation of
membrane potential" evidence=IMP] [GO:0042493 "response to drug"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IC] [GO:0048814 "regulation of dendrite
morphogenesis" evidence=IMP] [GO:0051291 "protein
heterooligomerization" evidence=ISO] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IMP]
[GO:0060084 "synaptic transmission involved in micturition"
evidence=ISO;IMP] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 MGI:MGI:87887 GO:GO:0014069 GO:GO:0007507
GO:GO:0042493 GO:GO:0035095 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0043025 GO:GO:0060079
GO:GO:0007626 GO:GO:0007271 GO:GO:0048814 GO:GO:0042166
HOVERGEN:HBG003756 GO:GO:0004889 eggNOG:NOG290206 GO:GO:0005892
GO:GO:0015464 CTD:1136 KO:K04805 GO:GO:0060084 GO:GO:0007171
GO:GO:0014056 GO:GO:0006940 GO:GO:0010035 EMBL:AF472588
EMBL:AY574262 EMBL:AK051730 EMBL:AK053497 EMBL:AK080415
IPI:IPI00225649 RefSeq:NP_660111.2 UniGene:Mm.63569
ProteinModelPortal:Q8R4G9 SMR:Q8R4G9 STRING:Q8R4G9
PhosphoSite:Q8R4G9 PRIDE:Q8R4G9 GeneID:110834 KEGG:mmu:110834
InParanoid:Q8R4G9 BindingDB:Q8R4G9 ChEMBL:CHEMBL1255158
NextBio:364751 Bgee:Q8R4G9 Genevestigator:Q8R4G9
GermOnline:ENSMUSG00000032303 Uniprot:Q8R4G9
Length = 499
Score = 881 (315.2 bits), Expect = 3.2e-88, P = 3.2e-88
Identities = 162/291 (55%), Positives = 209/291 (71%)
Query: 93 NQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMT 152
NQIM TN+W+ Q W DYKLKW P +Y GV+ + VP+E IW PDIVLYNNADG+++V T
Sbjct: 72 NQIMETNLWLKQIWNDYKLKWKPSDYQGVEFMRVPAEKIWKPDIVLYNNADGDFQVDDKT 131
Query: 153 KAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPD 212
KA+L Y G+V W PPAI+KS C+IDV YFPFD Q C MKFGSW+YD +DL +L G
Sbjct: 132 KALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDL--VLIGSS 189
Query: 213 SDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNL 272
++L+DY+ S EW I+K P ++E Y+CCEE Y DI +++ +RR LFYT+NL
Sbjct: 190 -------MNLKDYWESGEWAIIKAPGYKHEIKYNCCEEIYQDITYSLYIRRLPLFYTINL 242
Query: 273 IIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYL 332
IIPC+ ISFL+VLVFYLPSD GEKV+LC E IP TSL +PL+G+YL
Sbjct: 243 IIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYL 302
Query: 333 LFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
LFTMI VTLS+V+T+ VLNV++R+P TH M WV VF+ +LP+++F+ RP
Sbjct: 303 LFTMIFVTLSIVITVFVLNVHYRTPTTHTMPTWVKAVFLNLLPRVMFMTRP 353
Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
Identities = 90/188 (47%), Positives = 124/188 (65%)
Query: 18 SLTFLVFSVI-IAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNL 76
S+ LV ++ +A ++ RL+ L +YN +IRPV N S + ++ + +SQL++V+
Sbjct: 11 SMLMLVLMLLPVASASEAEHRLFQYLFEDYNEIIRPVANVSHPVIIQFEVSMSQLVKVD- 69
Query: 77 KNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDI 136
++ NQIM TN+W+ Q W DYKLKW P +Y GV+ + VP+E IW PDI
Sbjct: 70 --EV------------NQIMETNLWLKQIWNDYKLKWKPSDYQGVEFMRVPAEKIWKPDI 115
Query: 137 VLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWT 196
VLYNNADG+++V TKA+L Y G+V W PPAI+KS C+IDV YFPFD Q C MKFGSW+
Sbjct: 116 VLYNNADGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWS 175
Query: 197 YDGYTVDL 204
YD +DL
Sbjct: 176 YDKAKIDL 183
Score = 144 (55.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 24/37 (64%), Positives = 28/37 (75%)
Query: 519 QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
Q W DYKLKW P +Y GV+ + VP+E IW PDIVLYN
Sbjct: 83 QIWNDYKLKWKPSDYQGVEFMRVPAEKIWKPDIVLYN 119
>UNIPROTKB|F1M4L2 [details] [associations]
symbol:Chrna3 "Neuronal acetylcholine receptor subunit
alpha-3" species:10116 "Rattus norvegicus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 RGD:2345 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889 IPI:IPI00949759
ProteinModelPortal:F1M4L2 Ensembl:ENSRNOT00000065356
ArrayExpress:F1M4L2 Uniprot:F1M4L2
Length = 428
Score = 881 (315.2 bits), Expect = 3.2e-88, P = 3.2e-88
Identities = 162/291 (55%), Positives = 209/291 (71%)
Query: 93 NQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMT 152
NQIM TN+W+ Q W DYKLKW P +Y GV+ + VP+E IW PDIVLYNNADG+++V T
Sbjct: 60 NQIMETNLWLKQIWNDYKLKWKPSDYQGVEFMRVPAEKIWKPDIVLYNNADGDFQVDDKT 119
Query: 153 KAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPD 212
KA+L Y G+V W PPAI+KS C+IDV YFPFD Q C MKFGSW+YD +DL +L G
Sbjct: 120 KALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDL--VLIGSS 177
Query: 213 SDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNL 272
++L+DY+ S EW I+K P ++E Y+CCEE Y DI +++ +RR LFYT+NL
Sbjct: 178 -------MNLKDYWESGEWAIIKAPGYKHEIKYNCCEEIYQDITYSLYIRRLPLFYTINL 230
Query: 273 IIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYL 332
IIPC+ ISFL+VLVFYLPSD GEKV+LC E IP TSL +PL+G+YL
Sbjct: 231 IIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYL 290
Query: 333 LFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
LFTMI VTLS+V+T+ VLNV++R+P TH M WV VF+ +LP+++F+ RP
Sbjct: 291 LFTMIFVTLSIVITVFVLNVHYRTPTTHTMPTWVKAVFLNLLPRVMFMTRP 341
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 87/176 (49%), Positives = 117/176 (66%)
Query: 29 AQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVN 88
A ++ RL+ L +YN +IRPV N S + ++ + +SQL++V+ ++
Sbjct: 11 ASASEAEHRLFQYLFEDYNEIIRPVANVSHPVIIQFEVSMSQLVKVD---EV-------- 59
Query: 89 QNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEV 148
NQIM TN+W+ Q W DYKLKW P +Y GV+ + VP+E IW PDIVLYNNADG+++V
Sbjct: 60 ----NQIMETNLWLKQIWNDYKLKWKPSDYQGVEFMRVPAEKIWKPDIVLYNNADGDFQV 115
Query: 149 TIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
TKA+L Y G+V W PPAI+KS C+IDV YFPFD Q C MKFGSW+YD +DL
Sbjct: 116 DDKTKALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDL 171
Score = 144 (55.7 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 24/37 (64%), Positives = 28/37 (75%)
Query: 519 QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
Q W DYKLKW P +Y GV+ + VP+E IW PDIVLYN
Sbjct: 71 QIWNDYKLKWKPSDYQGVEFMRVPAEKIWKPDIVLYN 107
>ZFIN|ZDB-GENE-040108-2 [details] [associations]
symbol:chrna2a "cholinergic receptor, nicotinic,
alpha polypeptide 2a (neuronal)" species:7955 "Danio rerio"
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005892
"acetylcholine-gated channel complex" evidence=IDA] [GO:0015464
"acetylcholine receptor activity" evidence=IDA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 ZFIN:ZDB-GENE-040108-2 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HSSP:P02711 HOVERGEN:HBG003756
GO:GO:0004889 GO:GO:0005892 EMBL:AY256908 IPI:IPI00759125
UniGene:Dr.134391 ProteinModelPortal:Q7ZZP7 SMR:Q7ZZP7
InParanoid:Q7ZZP7 ArrayExpress:Q7ZZP7 Uniprot:Q7ZZP7
Length = 520
Score = 880 (314.8 bits), Expect = 4.1e-88, P = 4.1e-88
Identities = 167/292 (57%), Positives = 205/292 (70%)
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
KNQ+MTTNVW+ QEW DYKL+W+P E+ V ++ VPSE IW+PDIVLYNNADG + VT M
Sbjct: 79 KNQMMTTNVWLKQEWNDYKLRWNPSEFDNVTSIRVPSEMIWVPDIVLYNNADGEFAVTHM 138
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
TKA L + GKV W PPAIYKS C IDV +FPFD Q C MKFGSWTYD +DL+ I +G
Sbjct: 139 TKAHLFHTGKVSWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDKAKIDLEQI-EGT 197
Query: 212 DSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVN 271
+DL+DY+ S EW I+ N K Y CC E YPDI + +RR L YT+N
Sbjct: 198 --------VDLKDYWESGEWAIINAVGTYNTKKYDCCHEIYPDITYFFIIRRLPLSYTIN 249
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
LIIPC+ IS L+VLVFYLPSD GEK++LC EIIP TSL +PL+G+Y
Sbjct: 250 LIIPCLLISCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEY 309
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
LLFTMI VTLS+V+T+ VLNV+ RSP TH M WVH VF++ +P+ LF++RP
Sbjct: 310 LLFTMIFVTLSIVITVFVLNVHHRSPSTHSMPRWVHSVFLDHIPRWLFMRRP 361
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 97/171 (56%), Positives = 117/171 (68%)
Query: 37 RLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIM 96
+L+ L YN+ RPV N SD + VK GL ++QLI+V+ KNQ+MTTNVW LK
Sbjct: 39 KLFHKLFIGYNKWSRPVRNISDVVIVKFGLSIAQLIDVDEKNQMMTTNVW----LK---- 90
Query: 97 TTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAIL 156
QEW DYKL+W+P E+ V ++ VPSE IW+PDIVLYNNADG + VT MTKA L
Sbjct: 91 -------QEWNDYKLRWNPSEFDNVTSIRVPSEMIWVPDIVLYNNADGEFAVTHMTKAHL 143
Query: 157 HYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHI 207
+ GKV W PPAIYKS C IDV +FPFD Q C MKFGSWTYD +DL+ I
Sbjct: 144 FHTGKVSWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDKAKIDLEQI 194
Score = 150 (57.9 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 25/45 (55%), Positives = 33/45 (73%)
Query: 511 LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+ T + QEW DYKL+W+P E+ V ++ VPSE IW+PDIVLYN
Sbjct: 83 MTTNVWLKQEWNDYKLRWNPSEFDNVTSIRVPSEMIWVPDIVLYN 127
>UNIPROTKB|F1NAQ7 [details] [associations]
symbol:CHRNB4 "Neuronal acetylcholine receptor subunit
beta-4" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0001508 "regulation of action potential"
evidence=IEA] [GO:0006939 "smooth muscle contraction" evidence=IEA]
[GO:0006940 "regulation of smooth muscle contraction" evidence=IEA]
[GO:0007626 "locomotory behavior" evidence=IEA] [GO:0015464
"acetylcholine receptor activity" evidence=IEA] [GO:0035095
"behavioral response to nicotine" evidence=IEA] [GO:0060084
"synaptic transmission involved in micturition" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0004889 GO:GO:0015464 GO:GO:0001508
GO:GO:0006940 GO:GO:0035094 GeneTree:ENSGT00620000087691
EMBL:AADN02040457 IPI:IPI00682718 Ensembl:ENSGALT00000004749
OMA:GRRTINP Uniprot:F1NAQ7
Length = 489
Score = 862 (308.5 bits), Expect = 4.4e-88, Sum P(2) = 4.4e-88
Identities = 174/373 (46%), Positives = 243/373 (65%)
Query: 20 TFLVFSVIIAQ----GN---DEAKRLYDDLLS--NYNRLIRPVGNNSDKLTVKMGLKLSQ 70
T+ +F ++ GN D ++L + LLS YN+LIRP N+S +++++ + L+Q
Sbjct: 4 TYTLFLFVVGSFYFNGNTAADAEEKLMNHLLSPDRYNKLIRPAVNSSQLVSIELQVSLAQ 63
Query: 71 LIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEH 130
LI VN + QIMTTNVW+NQ EW DY+L W P +Y G++ L +P++H
Sbjct: 64 LISVNEREQIMTTNVWLNQ---------------EWIDYRLAWKPSDYEGINMLRIPAKH 108
Query: 131 IWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVM 190
IWLPDIVLYNNADG YEV++ T AI+ +G + W PPAIYKS C+I+V++FPFD Q C +
Sbjct: 109 IWLPDIVLYNNADGTYEVSLYTNAIVQNNGSIRWLPPAIYKSACKIEVKHFPFDQQNCTL 168
Query: 191 KFGSWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEE 250
KF SWTYD +D+ +L K + + D+ S EWDI+ +P R + +
Sbjct: 169 KFRSWTYDHTEIDM--VL------KTSMA-SMDDFTPSGEWDIVALPGRRT---VNPLDP 216
Query: 251 PYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXX 310
Y D+ ++ ++RK LFYT+NLIIPCV I+ L++LVFYLPSD GEK++LC
Sbjct: 217 NYVDVTYDFIIKRKPLFYTINLIIPCVLITSLAILVFYLPSDCGEKMTLCISVLLALTVF 276
Query: 311 XXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVF 370
++I+PPTSL VPL+GKYL+FTM+LVT S+V ++ VLNV+ RSP TH M PWV VF
Sbjct: 277 LLLISKIVPPTSLDVPLIGKYLMFTMVLVTFSIVTSVCVLNVHHRSPSTHTMPPWVKLVF 336
Query: 371 IEVLPKILFIQRP 383
+E LP LF++RP
Sbjct: 337 LERLPAYLFMKRP 349
Score = 165 (63.1 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 35/85 (41%), Positives = 53/85 (62%)
Query: 473 VSPTFDNQMILMPRPLTWRLPYELPSKLARLASIHFCDLLTPIN-FL-QEWEDYKLKWSP 530
+SP N++I + + EL LA+L S++ + + N +L QEW DY+L W P
Sbjct: 34 LSPDRYNKLIRPAVNSSQLVSIELQVSLAQLISVNEREQIMTTNVWLNQEWIDYRLAWKP 93
Query: 531 EEYGGVDTLHVPSEHIWLPDIVLYN 555
+Y G++ L +P++HIWLPDIVLYN
Sbjct: 94 SDYEGINMLRIPAKHIWLPDIVLYN 118
Score = 37 (18.1 bits), Expect = 4.4e-88, Sum P(2) = 4.4e-88
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 522 EDYKL----KWSPEEYGGVDTLHVPSEHI 546
+D++L K+SPE +D + +EH+
Sbjct: 407 QDFRLRTGTKFSPEVQEAIDGVSFIAEHM 435
>UNIPROTKB|P09482 [details] [associations]
symbol:CHRNA4 "Neuronal acetylcholine receptor subunit
alpha-4" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0001508 "regulation of
action potential" evidence=IEA] [GO:0001666 "response to hypoxia"
evidence=IEA] [GO:0005892 "acetylcholine-gated channel complex"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006816
"calcium ion transport" evidence=IEA] [GO:0006979 "response to
oxidative stress" evidence=IEA] [GO:0007271 "synaptic transmission,
cholinergic" evidence=IEA] [GO:0007626 "locomotory behavior"
evidence=IEA] [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0014059 "regulation of dopamine secretion"
evidence=IEA] [GO:0015464 "acetylcholine receptor activity"
evidence=IEA] [GO:0019233 "sensory perception of pain"
evidence=IEA] [GO:0035095 "behavioral response to nicotine"
evidence=IEA] [GO:0042113 "B cell activation" evidence=IEA]
[GO:0050890 "cognition" evidence=IEA] [GO:0051899 "membrane
depolarization" evidence=IEA] [GO:0060080 "regulation of inhibitory
postsynaptic membrane potential" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0006979 GO:GO:0009897
GO:GO:0007610 GO:GO:0014059 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0006281 GO:GO:0001666
HOVERGEN:HBG003756 GO:GO:0004889 HOGENOM:HOG000006756
eggNOG:NOG290206 GO:GO:0005892 GO:GO:0015464 GO:GO:0001508
OrthoDB:EOG480HWN GeneTree:ENSGT00620000087732 GO:GO:0035094
EMBL:X07348 EMBL:X07349 EMBL:X07350 EMBL:X07351 EMBL:X07352
EMBL:X07399 EMBL:AJ250361 IPI:IPI00575000 PIR:S00379
RefSeq:NP_990145.1 UniGene:Gga.4440 ProteinModelPortal:P09482
SMR:P09482 Ensembl:ENSGALT00000009316 GeneID:395606 KEGG:gga:395606
CTD:1137 InParanoid:P09482 KO:K04806 OMA:EDGVRCR BindingDB:P09482
ChEMBL:CHEMBL5569 NextBio:20815679 GO:GO:0042113 GO:GO:0006816
GO:GO:0051899 Uniprot:P09482
Length = 622
Score = 879 (314.5 bits), Expect = 5.3e-88, P = 5.3e-88
Identities = 162/293 (55%), Positives = 206/293 (70%)
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
KNQ+MTTNVWV QEW DYKL+W P+EY V ++ +PSE IW PDIVLYNNADG++ VT +
Sbjct: 74 KNQMMTTNVWVKQEWHDYKLRWDPQEYENVTSIRIPSELIWRPDIVLYNNADGDFAVTHL 133
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
TKA L YDG++ W PPAIYKS C IDV +FPFD Q C MKFGSWTYD +DL
Sbjct: 134 TKAHLFYDGRIKWMPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDKAKIDLV------ 187
Query: 212 DSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVN 271
+ +D DY+ S EW I+ N K Y CC E YPDI ++ +RR LFYT+N
Sbjct: 188 ---SMHSHVDQLDYWESGEWVIINAVGNYNSKKYECCTEIYPDITYSFIIRRLPLFYTIN 244
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
LIIPC+ IS L+VLVFYLPS+ GEK++LC EIIP TSL +PL+G+Y
Sbjct: 245 LIIPCLLISCLTVLVFYLPSECGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEY 304
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRPA 384
LLFTMI VTLS+++T+ VLNV+ RSP TH M WV +VF++++P++LF++RP+
Sbjct: 305 LLFTMIFVTLSIIITVFVLNVHHRSPRTHTMPDWVRRVFLDIVPRLLFMKRPS 357
Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 98/184 (53%), Positives = 122/184 (66%)
Query: 21 FLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQI 80
F F + + + E +RL L S YN+ RPV N SD + V+ GL ++QLI+V+ KNQ+
Sbjct: 19 FPAFGHVETRAHAE-ERLLKKLFSGYNKWSRPVANISDVVLVRFGLSIAQLIDVDEKNQM 77
Query: 81 MTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 140
MTTNVWV Q EW DYKL+W P+EY V ++ +PSE IW PDIVLYN
Sbjct: 78 MTTNVWVKQ---------------EWHDYKLRWDPQEYENVTSIRIPSELIWRPDIVLYN 122
Query: 141 NADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGY 200
NADG++ VT +TKA L YDG++ W PPAIYKS C IDV +FPFD Q C MKFGSWTYD
Sbjct: 123 NADGDFAVTHLTKAHLFYDGRIKWMPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDKA 182
Query: 201 TVDL 204
+DL
Sbjct: 183 KIDL 186
Score = 148 (57.2 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 24/37 (64%), Positives = 29/37 (78%)
Query: 519 QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
QEW DYKL+W P+EY V ++ +PSE IW PDIVLYN
Sbjct: 86 QEWHDYKLRWDPQEYENVTSIRIPSELIWRPDIVLYN 122
>UNIPROTKB|P32297 [details] [associations]
symbol:CHRNA3 "Neuronal acetylcholine receptor subunit
alpha-3" species:9606 "Homo sapiens" [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IDA;TAS] [GO:0015276 "ligand-gated ion channel
activity" evidence=TAS] [GO:0005892 "acetylcholine-gated channel
complex" evidence=IDA] [GO:0006811 "ion transport" evidence=NAS]
[GO:0007165 "signal transduction" evidence=IDA] [GO:0015464
"acetylcholine receptor activity" evidence=IDA] [GO:0042166
"acetylcholine binding" evidence=IC] [GO:0007399 "nervous system
development" evidence=IMP] [GO:0060084 "synaptic transmission
involved in micturition" evidence=IMP] [GO:0035095 "behavioral
response to nicotine" evidence=IMP] [GO:0006940 "regulation of
smooth muscle contraction" evidence=ISS] [GO:0007171 "activation of
transmembrane receptor protein tyrosine kinase activity"
evidence=ISS] [GO:0007271 "synaptic transmission, cholinergic"
evidence=ISS] [GO:0007626 "locomotory behavior" evidence=ISS]
[GO:0014056 "regulation of acetylcholine secretion" evidence=ISS]
[GO:0042391 "regulation of membrane potential" evidence=ISS]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=ISS]
[GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=ISS] [GO:0016021 "integral to membrane"
evidence=NAS] [GO:0043025 "neuronal cell body" evidence=ISS]
[GO:0030425 "dendrite" evidence=ISS] [GO:0014069 "postsynaptic
density" evidence=ISS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS]
Reactome:REACT_13685 InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0014069 GO:GO:0007507 GO:GO:0042493
GO:GO:0035095 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0043025 GO:GO:0060079 GO:GO:0007626
GO:GO:0007271 GO:GO:0048814 GO:GO:0042166 HOVERGEN:HBG003756
GO:GO:0004889 eggNOG:NOG290206 GO:GO:0005892 GO:GO:0015464 CTD:1136
KO:K04805 GO:GO:0060084 OMA:SKGCKEG EMBL:M86383 EMBL:M37981
EMBL:U62432 EMBL:Y08418 EMBL:AJ007783 EMBL:AJ007784 EMBL:AJ007785
EMBL:AJ007786 EMBL:AJ007787 EMBL:BT006646 EMBL:BT006897
EMBL:AC027228 EMBL:AC067863 EMBL:BC000513 EMBL:BC001642
EMBL:BC002996 EMBL:BC006114 EMBL:BC098443 EMBL:AF385584 EMBL:X53559
IPI:IPI00297165 IPI:IPI00852613 IPI:IPI00939562 PIR:A37040
PIR:A53956 RefSeq:NP_000734.2 RefSeq:NP_001160166.1
UniGene:Hs.89605 ProteinModelPortal:P32297 SMR:P32297 STRING:P32297
PhosphoSite:P32297 DMDM:254763435 PRIDE:P32297 DNASU:1136
Ensembl:ENST00000326828 Ensembl:ENST00000348639
Ensembl:ENST00000559658 GeneID:1136 KEGG:hsa:1136 UCSC:uc002beb.3
UCSC:uc002bec.3 GeneCards:GC15M078885 H-InvDB:HIX0017542
HGNC:HGNC:1957 HPA:HPA029430 MIM:118503 MIM:612052
neXtProt:NX_P32297 PharmGKB:PA113 InParanoid:P32297
PhylomeDB:P32297 BindingDB:P32297 ChEMBL:CHEMBL3068 ChiTaRS:CHRNA3
GenomeRNAi:1136 NextBio:4726 ArrayExpress:P32297 Bgee:P32297
CleanEx:HS_CHRNA3 Genevestigator:P32297 GermOnline:ENSG00000080644
GO:GO:0007171 GO:GO:0014056 GO:GO:0006940 GO:GO:0010035
Uniprot:P32297
Length = 505
Score = 879 (314.5 bits), Expect = 5.3e-88, P = 5.3e-88
Identities = 160/291 (54%), Positives = 210/291 (72%)
Query: 93 NQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMT 152
NQIM TN+W+ Q W DYKLKW+P +YGG + + VP++ IW PDIVLYNNA G+++V T
Sbjct: 78 NQIMETNLWLKQIWNDYKLKWNPSDYGGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKT 137
Query: 153 KAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPD 212
KA+L Y G+V W PPAI+KS C+IDV YFPFD Q C MKFGSW+YD +DL +L G
Sbjct: 138 KALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDL--VLIGSS 195
Query: 213 SDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNL 272
++L+DY+ S EW I+K P +++ Y+CCEE YPDI +++ +RR LFYT+NL
Sbjct: 196 -------MNLKDYWESGEWAIIKAPGYKHDIKYNCCEEIYPDITYSLYIRRLPLFYTINL 248
Query: 273 IIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYL 332
IIPC+ ISFL+VLVFYLPSD GEKV+LC E IP TSL +PL+G+YL
Sbjct: 249 IIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYL 308
Query: 333 LFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
LFTMI VTLS+V+T+ VLNV++R+P TH M WV VF+ +LP+++F+ RP
Sbjct: 309 LFTMIFVTLSIVITVFVLNVHYRTPTTHTMPSWVKTVFLNLLPRVMFMTRP 359
Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
Identities = 89/187 (47%), Positives = 126/187 (67%)
Query: 19 LTFLVFSVI-IAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLK 77
L L+ S++ +A+ ++ RL++ L +YN +IRPV N SD + + + +SQL++V+
Sbjct: 18 LLLLLLSLLPVARASEAEHRLFERLFEDYNEIIRPVANVSDPVIIHFEVSMSQLVKVD-- 75
Query: 78 NQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIV 137
++ NQIM TN+W+ Q W DYKLKW+P +YGG + + VP++ IW PDIV
Sbjct: 76 -EV------------NQIMETNLWLKQIWNDYKLKWNPSDYGGAEFMRVPAQKIWKPDIV 122
Query: 138 LYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTY 197
LYNNA G+++V TKA+L Y G+V W PPAI+KS C+IDV YFPFD Q C MKFGSW+Y
Sbjct: 123 LYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSY 182
Query: 198 DGYTVDL 204
D +DL
Sbjct: 183 DKAKIDL 189
Score = 146 (56.5 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 23/37 (62%), Positives = 29/37 (78%)
Query: 519 QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
Q W DYKLKW+P +YGG + + VP++ IW PDIVLYN
Sbjct: 89 QIWNDYKLKWNPSDYGGAEFMRVPAQKIWKPDIVLYN 125
>UNIPROTKB|F1NWX4 [details] [associations]
symbol:CHRNB4 "Neuronal acetylcholine receptor subunit
beta-4" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087691 EMBL:AADN02040457 IPI:IPI00820288
Ensembl:ENSGALT00000034665 Uniprot:F1NWX4
Length = 470
Score = 861 (308.1 bits), Expect = 5.6e-88, Sum P(2) = 5.6e-88
Identities = 170/353 (48%), Positives = 235/353 (66%)
Query: 33 DEAKRLYDDLLS--NYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQN 90
D ++L + LLS YN+LIRP N+S +++++ + L+QLI VN + QIMTTNVW+NQ
Sbjct: 5 DAEEKLMNHLLSPDRYNKLIRPAVNSSQLVSIELQVSLAQLISVNEREQIMTTNVWLNQ- 63
Query: 91 LKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTI 150
EW DY+L W P +Y G++ L +P++HIWLPDIVLYNNADG YEV++
Sbjct: 64 --------------EWIDYRLAWKPSDYEGINMLRIPAKHIWLPDIVLYNNADGTYEVSL 109
Query: 151 MTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQG 210
T AI+ +G + W PPAIYKS C+I+V++FPFD Q C +KF SWTYD +D+ +L
Sbjct: 110 YTNAIVQNNGSIRWLPPAIYKSACKIEVKHFPFDQQNCTLKFRSWTYDHTEIDM--VL-- 165
Query: 211 PDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTV 270
K + + D+ S EWDI+ +P R + + Y D+ ++ ++RK LFYT+
Sbjct: 166 ----KTSMA-SMDDFTPSGEWDIVALPGRRT---VNPLDPNYVDVTYDFIIKRKPLFYTI 217
Query: 271 NLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGK 330
NLIIPCV I+ L++LVFYLPSD GEK++LC ++I+PPTSL VPL+GK
Sbjct: 218 NLIIPCVLITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLIGK 277
Query: 331 YLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
YL+FTM+LVT S+V ++ VLNV+ RSP TH M PWV VF+E LP LF++RP
Sbjct: 278 YLMFTMVLVTFSIVTSVCVLNVHHRSPSTHTMPPWVKLVFLERLPAYLFMKRP 330
Score = 165 (63.1 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 35/85 (41%), Positives = 53/85 (62%)
Query: 473 VSPTFDNQMILMPRPLTWRLPYELPSKLARLASIHFCDLLTPIN-FL-QEWEDYKLKWSP 530
+SP N++I + + EL LA+L S++ + + N +L QEW DY+L W P
Sbjct: 15 LSPDRYNKLIRPAVNSSQLVSIELQVSLAQLISVNEREQIMTTNVWLNQEWIDYRLAWKP 74
Query: 531 EEYGGVDTLHVPSEHIWLPDIVLYN 555
+Y G++ L +P++HIWLPDIVLYN
Sbjct: 75 SDYEGINMLRIPAKHIWLPDIVLYN 99
Score = 37 (18.1 bits), Expect = 5.6e-88, Sum P(2) = 5.6e-88
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 522 EDYKL----KWSPEEYGGVDTLHVPSEHI 546
+D++L K+SPE +D + +EH+
Sbjct: 388 QDFRLRTGTKFSPEVQEAIDGVSFIAEHM 416
>UNIPROTKB|F1P4U2 [details] [associations]
symbol:CHRNB4 "Neuronal acetylcholine receptor subunit
beta-4" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087691 IPI:IPI00580226 EMBL:AADN02040457
Ensembl:ENSGALT00000039804 Uniprot:F1P4U2
Length = 476
Score = 861 (308.1 bits), Expect = 5.6e-88, Sum P(2) = 5.6e-88
Identities = 170/353 (48%), Positives = 235/353 (66%)
Query: 33 DEAKRLYDDLLS--NYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQN 90
D ++L + LLS YN+LIRP N+S +++++ + L+QLI VN + QIMTTNVW+NQ
Sbjct: 11 DAEEKLMNHLLSPDRYNKLIRPAVNSSQLVSIELQVSLAQLISVNEREQIMTTNVWLNQ- 69
Query: 91 LKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTI 150
EW DY+L W P +Y G++ L +P++HIWLPDIVLYNNADG YEV++
Sbjct: 70 --------------EWIDYRLAWKPSDYEGINMLRIPAKHIWLPDIVLYNNADGTYEVSL 115
Query: 151 MTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQG 210
T AI+ +G + W PPAIYKS C+I+V++FPFD Q C +KF SWTYD +D+ +L
Sbjct: 116 YTNAIVQNNGSIRWLPPAIYKSACKIEVKHFPFDQQNCTLKFRSWTYDHTEIDM--VL-- 171
Query: 211 PDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTV 270
K + + D+ S EWDI+ +P R + + Y D+ ++ ++RK LFYT+
Sbjct: 172 ----KTSMA-SMDDFTPSGEWDIVALPGRRT---VNPLDPNYVDVTYDFIIKRKPLFYTI 223
Query: 271 NLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGK 330
NLIIPCV I+ L++LVFYLPSD GEK++LC ++I+PPTSL VPL+GK
Sbjct: 224 NLIIPCVLITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLIGK 283
Query: 331 YLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
YL+FTM+LVT S+V ++ VLNV+ RSP TH M PWV VF+E LP LF++RP
Sbjct: 284 YLMFTMVLVTFSIVTSVCVLNVHHRSPSTHTMPPWVKLVFLERLPAYLFMKRP 336
Score = 165 (63.1 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 35/85 (41%), Positives = 53/85 (62%)
Query: 473 VSPTFDNQMILMPRPLTWRLPYELPSKLARLASIHFCDLLTPIN-FL-QEWEDYKLKWSP 530
+SP N++I + + EL LA+L S++ + + N +L QEW DY+L W P
Sbjct: 21 LSPDRYNKLIRPAVNSSQLVSIELQVSLAQLISVNEREQIMTTNVWLNQEWIDYRLAWKP 80
Query: 531 EEYGGVDTLHVPSEHIWLPDIVLYN 555
+Y G++ L +P++HIWLPDIVLYN
Sbjct: 81 SDYEGINMLRIPAKHIWLPDIVLYN 105
Score = 37 (18.1 bits), Expect = 5.6e-88, Sum P(2) = 5.6e-88
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 522 EDYKL----KWSPEEYGGVDTLHVPSEHI 546
+D++L K+SPE +D + +EH+
Sbjct: 394 QDFRLRTGTKFSPEVQEAIDGVSFIAEHM 422
>UNIPROTKB|F1RKU8 [details] [associations]
symbol:CHRNA3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060084 "synaptic transmission involved in micturition"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0048814 "regulation of
dendrite morphogenesis" evidence=IEA] [GO:0035095 "behavioral
response to nicotine" evidence=IEA] [GO:0015464 "acetylcholine
receptor activity" evidence=IEA] [GO:0014056 "regulation of
acetylcholine secretion" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007271 "synaptic transmission,
cholinergic" evidence=IEA] [GO:0007171 "activation of transmembrane
receptor protein tyrosine kinase activity" evidence=IEA]
[GO:0006940 "regulation of smooth muscle contraction" evidence=IEA]
[GO:0005892 "acetylcholine-gated channel complex" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0035095
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0060079
GO:GO:0007626 GO:GO:0007271 GO:GO:0048814 GO:GO:0004889
GO:GO:0005892 GO:GO:0015464 GeneTree:ENSGT00620000087732 CTD:1136
KO:K04805 GO:GO:0060084 OMA:SKGCKEG GO:GO:0007171 GO:GO:0014056
GO:GO:0006940 EMBL:CT967296 RefSeq:XP_001925795.3
ProteinModelPortal:F1RKU8 Ensembl:ENSSSCT00000001958
GeneID:100151989 KEGG:ssc:100151989 ArrayExpress:F1RKU8
Uniprot:F1RKU8
Length = 505
Score = 878 (314.1 bits), Expect = 6.7e-88, P = 6.7e-88
Identities = 170/345 (49%), Positives = 235/345 (68%)
Query: 49 LIRPVGNNSD---KLTVKMGLKLSQLIE--VNLKNQIMTT-NVWVNQNLK----NQIMTT 98
L+ P + SD +L ++ +++I N+ + ++ V ++Q +K NQIM T
Sbjct: 24 LLLPAASTSDAEHRLFERLFEDYNEIIRPVANVSDPVIIQFEVSMSQLVKVDEVNQIMET 83
Query: 99 NVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHY 158
N+W+ Q W DYKLKW+P +Y G + + VP++ IW PDIVLYNNA G+++V TKA+L Y
Sbjct: 84 NLWLKQIWNDYKLKWNPSDYDGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKY 143
Query: 159 DGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSDKIDI 218
G+V W PPAI+KS C+IDV YFPFD Q C MKFGSW+YD +DL +L G
Sbjct: 144 TGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDL--VLIGSS------ 195
Query: 219 GIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLIIPCVG 278
++L+DY+ S EW I+K P +++ Y+CCEE YPDI +++ +RR LFYT+NLIIPC+
Sbjct: 196 -MNLKDYWESGEWAIIKAPGYKHDIKYNCCEEIYPDITYSLYIRRLPLFYTINLIIPCLL 254
Query: 279 ISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLFTMIL 338
ISFL+VLVFYLPSD GEKV+LC E IP TSL +PL+G+YLLFTMI
Sbjct: 255 ISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIF 314
Query: 339 VTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
VTLS+V+T+ VLNV++R+P TH M WV VF+E+LP+++F+ RP
Sbjct: 315 VTLSIVITVFVLNVHYRTPTTHTMPTWVKTVFLELLPRVMFMTRP 359
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 92/200 (46%), Positives = 129/200 (64%)
Query: 5 GPPRTAAMHVLFPSLTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKM 64
G R A++ +L L L+ + A +D RL++ L +YN +IRPV N SD + ++
Sbjct: 6 GRVRVASLSLL-RVLPLLLLLLPAASTSDAEHRLFERLFEDYNEIIRPVANVSDPVIIQF 64
Query: 65 GLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTL 124
+ +SQL++V+ ++ NQIM TN+W+ Q W DYKLKW+P +Y G + +
Sbjct: 65 EVSMSQLVKVD---EV------------NQIMETNLWLKQIWNDYKLKWNPSDYDGAEFM 109
Query: 125 HVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFD 184
VP++ IW PDIVLYNNA G+++V TKA+L Y G+V W PPAI+KS C+IDV YFPFD
Sbjct: 110 RVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVTYFPFD 169
Query: 185 VQTCVMKFGSWTYDGYTVDL 204
Q C MKFGSW+YD +DL
Sbjct: 170 YQNCTMKFGSWSYDKAKIDL 189
Score = 139 (54.0 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 22/37 (59%), Positives = 28/37 (75%)
Query: 519 QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
Q W DYKLKW+P +Y G + + VP++ IW PDIVLYN
Sbjct: 89 QIWNDYKLKWNPSDYDGAEFMRVPAQKIWKPDIVLYN 125
>UNIPROTKB|P09484 [details] [associations]
symbol:CHRNB2 "Neuronal acetylcholine receptor subunit
beta-2" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
eggNOG:NOG290206 EMBL:X07353 EMBL:X07400 EMBL:X07354 EMBL:X07355
EMBL:X07356 EMBL:X07357 EMBL:AJ250362 EMBL:X53092 IPI:IPI00594894
PIR:S00380 RefSeq:NP_990144.1 UniGene:Gga.336
ProteinModelPortal:P09484 SMR:P09484 GeneID:395605 KEGG:gga:395605
CTD:1141 KO:K04813 ChEMBL:CHEMBL5195 NextBio:20815678
Uniprot:P09484
Length = 491
Score = 877 (313.8 bits), Expect = 8.6e-88, P = 8.6e-88
Identities = 172/353 (48%), Positives = 236/353 (66%)
Query: 33 DEAKRLYDDLL--SNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQN 90
D +RL + LL + YN+LIRP N S +TV++ + L+QLI V+ + QIMTTNVW+ Q
Sbjct: 20 DTEERLVEYLLDPTRYNKLIRPATNGSQLVTVQLMVSLAQLISVHEREQIMTTNVWLTQ- 78
Query: 91 LKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTI 150
EWEDY+L W PE++ + + +PS+HIWLPD+VLYNNADG YEV+
Sbjct: 79 --------------EWEDYRLTWKPEDFDNMKKVRLPSKHIWLPDVVLYNNADGMYEVSF 124
Query: 151 MTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQG 210
+ A++ YDG + W PPAIYKS C+I+V++FPFD Q C MKF SWTYD +DL +L
Sbjct: 125 YSNAVISYDGSIFWLPPAIYKSACKIEVKHFPFDQQNCTMKFRSWTYDRTEIDL--VL-- 180
Query: 211 PDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTV 270
K ++ L D+ S EWDI+ +P RNE + + Y DI ++ +RRK LFYT+
Sbjct: 181 ----KSEVA-SLDDFTPSGEWDIVALPGRRNE---NPDDSTYVDITYDFIIRRKPLFYTI 232
Query: 271 NLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGK 330
NLIIPC+ I+ L++LVFYLPSD GEK++LC ++I+PPTSL VPL+GK
Sbjct: 233 NLIIPCILITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLVGK 292
Query: 331 YLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
YL+FTM+LVT S+V ++ VLNV+ RSP TH M PWV +F+ LP +LF+++P
Sbjct: 293 YLMFTMVLVTFSIVTSVCVLNVHHRSPTTHTMPPWVRTLFLRKLPALLFMKQP 345
Score = 172 (65.6 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 39/102 (38%), Positives = 59/102 (57%)
Query: 462 SMCPPTQDGTD---VSPTFDNQMILMPRPLT---WRLPYELPSKLARLASIHFCDLLTPI 515
S+C T++ + PT N++I RP T + +L LA+L S+H + +
Sbjct: 16 SLCTDTEERLVEYLLDPTRYNKLI---RPATNGSQLVTVQLMVSLAQLISVHEREQIMTT 72
Query: 516 N--FLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
N QEWEDY+L W PE++ + + +PS+HIWLPD+VLYN
Sbjct: 73 NVWLTQEWEDYRLTWKPEDFDNMKKVRLPSKHIWLPDVVLYN 114
>UNIPROTKB|F1N9F1 [details] [associations]
symbol:CHRNA2 "Neuronal acetylcholine receptor subunit
alpha-2" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005892
"acetylcholine-gated channel complex" evidence=IEA] [GO:0015464
"acetylcholine receptor activity" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889 GO:GO:0005892
GO:GO:0015464 GeneTree:ENSGT00620000087732 EMBL:AADN02018409
EMBL:AADN02018408 IPI:IPI00683362 ProteinModelPortal:F1N9F1
Ensembl:ENSGALT00000031566 Uniprot:F1N9F1
Length = 499
Score = 875 (313.1 bits), Expect = 1.4e-87, P = 1.4e-87
Identities = 165/292 (56%), Positives = 204/292 (69%)
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
KNQ+MTTNVW+ QEW DYKL+W+PE++ V ++ VPSE IW+PDIVLYNNADG + VT M
Sbjct: 69 KNQMMTTNVWLKQEWSDYKLRWNPEDFDNVTSIRVPSEMIWIPDIVLYNNADGEFAVTHM 128
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
TKA L +GKV W PPAIYKS C IDV YFPFD Q C MKFGSWTYD +DL+++
Sbjct: 129 TKAHLFSNGKVKWVPPAIYKSSCSIDVTYFPFDQQNCKMKFGSWTYDKAKIDLENM---- 184
Query: 212 DSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVN 271
+ +DL+DY+ S EW I+ N K Y CC E YPDI F +RR LFYT+N
Sbjct: 185 -----EHHVDLKDYWESGEWAIINAIGRYNSKKYDCCTEIYPDITFYFVIRRLPLFYTIN 239
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
LIIPC+ IS L+VLVFYLPSD GEK++LC EIIP TSL +PL+G+Y
Sbjct: 240 LIIPCLLISCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEY 299
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
LLFTMI VTLS+++T+ VLNV+ RSP TH M WV F+ +P+ LF++RP
Sbjct: 300 LLFTMIFVTLSIIITVFVLNVHHRSPSTHTMPHWVRSFFLGFIPRWLFMKRP 351
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 102/184 (55%), Positives = 127/184 (69%)
Query: 25 SVIIAQGNDEAK-RLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTT 83
S++ + EA+ RL+ L + YNR RPV N SD + VK GL ++QLI+V+ KNQ+MTT
Sbjct: 16 SLLPFRHRSEAEDRLFKHLFTGYNRWSRPVPNTSDVVIVKFGLSIAQLIDVDEKNQMMTT 75
Query: 84 NVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNAD 143
NVW LK QEW DYKL+W+PE++ V ++ VPSE IW+PDIVLYNNAD
Sbjct: 76 NVW----LK-----------QEWSDYKLRWNPEDFDNVTSIRVPSEMIWIPDIVLYNNAD 120
Query: 144 GNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVD 203
G + VT MTKA L +GKV W PPAIYKS C IDV YFPFD Q C MKFGSWTYD +D
Sbjct: 121 GEFAVTHMTKAHLFSNGKVKWVPPAIYKSSCSIDVTYFPFDQQNCKMKFGSWTYDKAKID 180
Query: 204 LKHI 207
L+++
Sbjct: 181 LENM 184
Score = 153 (58.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 25/45 (55%), Positives = 34/45 (75%)
Query: 511 LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+ T + QEW DYKL+W+PE++ V ++ VPSE IW+PDIVLYN
Sbjct: 73 MTTNVWLKQEWSDYKLRWNPEDFDNVTSIRVPSEMIWIPDIVLYN 117
>UNIPROTKB|F1NHP4 [details] [associations]
symbol:CHRNA2 "Neuronal acetylcholine receptor subunit
alpha-2" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889 IPI:IPI00577533
GeneTree:ENSGT00620000087732 EMBL:AADN02018409 EMBL:AADN02018408
Ensembl:ENSGALT00000026738 Uniprot:F1NHP4
Length = 388
Score = 875 (313.1 bits), Expect = 1.4e-87, P = 1.4e-87
Identities = 165/292 (56%), Positives = 204/292 (69%)
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
KNQ+MTTNVW+ QEW DYKL+W+PE++ V ++ VPSE IW+PDIVLYNNADG + VT M
Sbjct: 63 KNQMMTTNVWLKQEWSDYKLRWNPEDFDNVTSIRVPSEMIWIPDIVLYNNADGEFAVTHM 122
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
TKA L +GKV W PPAIYKS C IDV YFPFD Q C MKFGSWTYD +DL+++
Sbjct: 123 TKAHLFSNGKVKWVPPAIYKSSCSIDVTYFPFDQQNCKMKFGSWTYDKAKIDLENM---- 178
Query: 212 DSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVN 271
+ +DL+DY+ S EW I+ N K Y CC E YPDI F +RR LFYT+N
Sbjct: 179 -----EHHVDLKDYWESGEWAIINAIGRYNSKKYDCCTEIYPDITFYFVIRRLPLFYTIN 233
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
LIIPC+ IS L+VLVFYLPSD GEK++LC EIIP TSL +PL+G+Y
Sbjct: 234 LIIPCLLISCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEY 293
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
LLFTMI VTLS+++T+ VLNV+ RSP TH M WV F+ +P+ LF++RP
Sbjct: 294 LLFTMIFVTLSIIITVFVLNVHHRSPSTHTMPHWVRSFFLGFIPRWLFMKRP 345
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 99/171 (57%), Positives = 120/171 (70%)
Query: 37 RLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIM 96
RL+ L + YNR RPV N SD + VK GL ++QLI+V+ KNQ+MTTNVW LK
Sbjct: 23 RLFKHLFTGYNRWSRPVPNTSDVVIVKFGLSIAQLIDVDEKNQMMTTNVW----LK---- 74
Query: 97 TTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAIL 156
QEW DYKL+W+PE++ V ++ VPSE IW+PDIVLYNNADG + VT MTKA L
Sbjct: 75 -------QEWSDYKLRWNPEDFDNVTSIRVPSEMIWIPDIVLYNNADGEFAVTHMTKAHL 127
Query: 157 HYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHI 207
+GKV W PPAIYKS C IDV YFPFD Q C MKFGSWTYD +DL+++
Sbjct: 128 FSNGKVKWVPPAIYKSSCSIDVTYFPFDQQNCKMKFGSWTYDKAKIDLENM 178
Score = 153 (58.9 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 25/45 (55%), Positives = 34/45 (75%)
Query: 511 LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+ T + QEW DYKL+W+PE++ V ++ VPSE IW+PDIVLYN
Sbjct: 67 MTTNVWLKQEWSDYKLRWNPEDFDNVTSIRVPSEMIWIPDIVLYN 111
>UNIPROTKB|P09480 [details] [associations]
symbol:CHRNA2 "Neuronal acetylcholine receptor subunit
alpha-2" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 eggNOG:NOG290206 EMBL:X07339 EMBL:X07340
EMBL:X07341 EMBL:X07342 EMBL:X07343 EMBL:X07344 EMBL:AJ250360
IPI:IPI00577533 PIR:S00377 RefSeq:NP_990146.1 UniGene:Gga.337
ProteinModelPortal:P09480 SMR:P09480 GeneID:395607 KEGG:gga:395607
CTD:1135 KO:K04804 NextBio:20815680 Uniprot:P09480
Length = 528
Score = 875 (313.1 bits), Expect = 1.4e-87, P = 1.4e-87
Identities = 165/292 (56%), Positives = 204/292 (69%)
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
KNQ+MTTNVW+ QEW DYKL+W+PE++ V ++ VPSE IW+PDIVLYNNADG + VT M
Sbjct: 76 KNQMMTTNVWLKQEWSDYKLRWNPEDFDNVTSIRVPSEMIWIPDIVLYNNADGEFAVTHM 135
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
TKA L +GKV W PPAIYKS C IDV YFPFD Q C MKFGSWTYD +DL+++
Sbjct: 136 TKAHLFSNGKVKWVPPAIYKSSCSIDVTYFPFDQQNCKMKFGSWTYDKAKIDLENM---- 191
Query: 212 DSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVN 271
+ +DL+DY+ S EW I+ N K Y CC E YPDI F +RR LFYT+N
Sbjct: 192 -----EHHVDLKDYWESGEWAIINAIGRYNSKKYDCCTEIYPDITFYFVIRRLPLFYTIN 246
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
LIIPC+ IS L+VLVFYLPSD GEK++LC EIIP TSL +PL+G+Y
Sbjct: 247 LIIPCLLISCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEY 306
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
LLFTMI VTLS+++T+ VLNV+ RSP TH M WV F+ +P+ LF++RP
Sbjct: 307 LLFTMIFVTLSIIITVFVLNVHHRSPSTHTMPHWVRSFFLGFIPRWLFMKRP 358
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 99/171 (57%), Positives = 120/171 (70%)
Query: 37 RLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIM 96
RL+ L + YNR RPV N SD + VK GL ++QLI+V+ KNQ+MTTNVW LK
Sbjct: 36 RLFKHLFTGYNRWSRPVPNTSDVVIVKFGLSIAQLIDVDEKNQMMTTNVW----LK---- 87
Query: 97 TTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAIL 156
QEW DYKL+W+PE++ V ++ VPSE IW+PDIVLYNNADG + VT MTKA L
Sbjct: 88 -------QEWSDYKLRWNPEDFDNVTSIRVPSEMIWIPDIVLYNNADGEFAVTHMTKAHL 140
Query: 157 HYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHI 207
+GKV W PPAIYKS C IDV YFPFD Q C MKFGSWTYD +DL+++
Sbjct: 141 FSNGKVKWVPPAIYKSSCSIDVTYFPFDQQNCKMKFGSWTYDKAKIDLENM 191
Score = 153 (58.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 25/45 (55%), Positives = 34/45 (75%)
Query: 511 LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+ T + QEW DYKL+W+PE++ V ++ VPSE IW+PDIVLYN
Sbjct: 80 MTTNVWLKQEWSDYKLRWNPEDFDNVTSIRVPSEMIWIPDIVLYN 124
>UNIPROTKB|F1MYI7 [details] [associations]
symbol:CHRNA3 "Neuronal acetylcholine receptor subunit
alpha-3" species:9913 "Bos taurus" [GO:0060084 "synaptic
transmission involved in micturition" evidence=IEA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IEA] [GO:0048814 "regulation of dendrite morphogenesis"
evidence=IEA] [GO:0035095 "behavioral response to nicotine"
evidence=IEA] [GO:0015464 "acetylcholine receptor activity"
evidence=IEA] [GO:0014056 "regulation of acetylcholine secretion"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0007271 "synaptic transmission, cholinergic" evidence=IEA]
[GO:0007171 "activation of transmembrane receptor protein tyrosine
kinase activity" evidence=IEA] [GO:0006940 "regulation of smooth
muscle contraction" evidence=IEA] [GO:0005892 "acetylcholine-gated
channel complex" evidence=IEA] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0035095 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0060079 GO:GO:0007626
GO:GO:0007271 GO:GO:0048814 GO:GO:0004889 GO:GO:0005892
GO:GO:0015464 GeneTree:ENSGT00620000087732 GO:GO:0060084
GO:GO:0007171 GO:GO:0014056 GO:GO:0006940 EMBL:DAAA02052433
IPI:IPI00701547 Ensembl:ENSBTAT00000004070 Uniprot:F1MYI7
Length = 482
Score = 875 (313.1 bits), Expect = 1.4e-87, P = 1.4e-87
Identities = 159/292 (54%), Positives = 210/292 (71%)
Query: 93 NQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMT 152
NQIM TN+W+ Q W DYKLKW+P +Y G + + VP++ IW PDIVLYNNA G+++V T
Sbjct: 55 NQIMETNLWLKQIWNDYKLKWNPSDYDGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKT 114
Query: 153 KAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPD 212
KA+L Y G+V W PPAI+KS C+IDV YFPFD Q C MKFGSW+YD +DL +L G
Sbjct: 115 KALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDL--VLIGSS 172
Query: 213 SDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNL 272
++L+DY+ S EW I+K P +++ Y+CCEE YPDI +++ +RR LFYT+NL
Sbjct: 173 -------MNLKDYWESGEWAIIKAPGYKHDIKYNCCEEIYPDITYSLYIRRLPLFYTINL 225
Query: 273 IIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYL 332
IIPC+ ISFL+VLVFYLPSD GEKV+LC E IP TSL +PL+G+YL
Sbjct: 226 IIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYL 285
Query: 333 LFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRPA 384
LFTMI VTLS+V+T+ VLNV++R+P TH M WV +F+ +LP+++F+ RPA
Sbjct: 286 LFTMIFVTLSIVITVFVLNVHYRTPTTHTMPAWVKTIFLNLLPRVMFMTRPA 337
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 86/177 (48%), Positives = 119/177 (67%)
Query: 28 IAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWV 87
+A +D RL++ L +YN +IRPV N SD + ++ + +SQL++V+ ++
Sbjct: 5 VASTSDAEHRLFERLFEDYNEIIRPVANVSDPVIIQFEVSMSQLVKVD---EV------- 54
Query: 88 NQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYE 147
NQIM TN+W+ Q W DYKLKW+P +Y G + + VP++ IW PDIVLYNNA G+++
Sbjct: 55 -----NQIMETNLWLKQIWNDYKLKWNPSDYDGAEFMRVPAQKIWKPDIVLYNNAVGDFQ 109
Query: 148 VTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
V TKA+L Y G+V W PPAI+KS C+IDV YFPFD Q C MKFGSW+YD +DL
Sbjct: 110 VDDKTKALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDL 166
Score = 139 (54.0 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 22/37 (59%), Positives = 28/37 (75%)
Query: 519 QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
Q W DYKLKW+P +Y G + + VP++ IW PDIVLYN
Sbjct: 66 QIWNDYKLKWNPSDYDGAEFMRVPAQKIWKPDIVLYN 102
>UNIPROTKB|F1P8T5 [details] [associations]
symbol:CHRNA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087732 EMBL:AAEX03008991
Ensembl:ENSCAFT00000002688 Uniprot:F1P8T5
Length = 625
Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
Identities = 159/292 (54%), Positives = 210/292 (71%)
Query: 93 NQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMT 152
NQIM TN+W+ Q W DYKLKW+P +Y G + + VP++ IW PDIVLYNNA G+++V T
Sbjct: 77 NQIMETNLWLKQIWNDYKLKWNPADYDGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKT 136
Query: 153 KAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPD 212
KA+L Y G+V W PPAI+KS C+IDV YFPFD Q C MKFGSW+YD +DL +L G
Sbjct: 137 KALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDL--VLIGSS 194
Query: 213 SDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNL 272
++L+DY+ S EW I+K P +++ Y+CCEE YPDI +++ +RR LFYT+NL
Sbjct: 195 -------MNLKDYWESGEWAIIKAPGYKHDIKYNCCEEIYPDITYSLYIRRLPLFYTINL 247
Query: 273 IIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYL 332
IIPC+ ISFL+VLVFYLPSD GEKV+LC E IP TSL +PL+G+YL
Sbjct: 248 IIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYL 307
Query: 333 LFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRPA 384
LFTMI VTLS+V+T+ VLNV++R+P TH M WV +F+ +LP+++F+ RPA
Sbjct: 308 LFTMIFVTLSIVITVFVLNVHYRTPTTHTMPTWVKTIFLHLLPRVMFMTRPA 359
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 93/200 (46%), Positives = 129/200 (64%)
Query: 5 GPPRTAAMHVLFPSLTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKM 64
G PR A + +L P L LV A ++ RL++ L +YN +IRPV N S+ + ++
Sbjct: 4 GHPRRAGVPLLPPLLLLLVLLPPGALASEAEHRLFERLFEDYNEIIRPVANVSEPVIIQF 63
Query: 65 GLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTL 124
+ +SQL++V+ ++ NQIM TN+W+ Q W DYKLKW+P +Y G + +
Sbjct: 64 EVSMSQLVKVD---EV------------NQIMETNLWLKQIWNDYKLKWNPADYDGAEFM 108
Query: 125 HVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFD 184
VP++ IW PDIVLYNNA G+++V TKA+L Y G+V W PPAI+KS C+IDV YFPFD
Sbjct: 109 RVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVTYFPFD 168
Query: 185 VQTCVMKFGSWTYDGYTVDL 204
Q C MKFGSW+YD +DL
Sbjct: 169 YQNCTMKFGSWSYDKAKIDL 188
Score = 138 (53.6 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 22/37 (59%), Positives = 28/37 (75%)
Query: 519 QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
Q W DYKLKW+P +Y G + + VP++ IW PDIVLYN
Sbjct: 88 QIWNDYKLKWNPADYDGAEFMRVPAQKIWKPDIVLYN 124
>UNIPROTKB|F1P8T6 [details] [associations]
symbol:CHRNA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087732 EMBL:AAEX03008991
Ensembl:ENSCAFT00000002686 OMA:LMARDDT Uniprot:F1P8T6
Length = 438
Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
Identities = 159/292 (54%), Positives = 210/292 (71%)
Query: 93 NQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMT 152
NQIM TN+W+ Q W DYKLKW+P +Y G + + VP++ IW PDIVLYNNA G+++V T
Sbjct: 11 NQIMETNLWLKQIWNDYKLKWNPADYDGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKT 70
Query: 153 KAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPD 212
KA+L Y G+V W PPAI+KS C+IDV YFPFD Q C MKFGSW+YD +DL +L G
Sbjct: 71 KALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDL--VLIGSS 128
Query: 213 SDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNL 272
++L+DY+ S EW I+K P +++ Y+CCEE YPDI +++ +RR LFYT+NL
Sbjct: 129 -------MNLKDYWESGEWAIIKAPGYKHDIKYNCCEEIYPDITYSLYIRRLPLFYTINL 181
Query: 273 IIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYL 332
IIPC+ ISFL+VLVFYLPSD GEKV+LC E IP TSL +PL+G+YL
Sbjct: 182 IIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYL 241
Query: 333 LFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRPA 384
LFTMI VTLS+V+T+ VLNV++R+P TH M WV +F+ +LP+++F+ RPA
Sbjct: 242 LFTMIFVTLSIVITVFVLNVHYRTPTTHTMPTWVKTIFLHLLPRVMFMTRPA 293
Score = 138 (53.6 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 22/37 (59%), Positives = 28/37 (75%)
Query: 519 QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
Q W DYKLKW+P +Y G + + VP++ IW PDIVLYN
Sbjct: 22 QIWNDYKLKWNPADYDGAEFMRVPAQKIWKPDIVLYN 58
>UNIPROTKB|E1BJF7 [details] [associations]
symbol:CHRNA3 "Neuronal acetylcholine receptor subunit
alpha-3" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087732 OMA:SKGCKEG EMBL:DAAA02052433
IPI:IPI00715081 ProteinModelPortal:E1BJF7
Ensembl:ENSBTAT00000004072 Uniprot:E1BJF7
Length = 401
Score = 871 (311.7 bits), Expect = 3.7e-87, P = 3.7e-87
Identities = 158/291 (54%), Positives = 209/291 (71%)
Query: 93 NQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMT 152
NQIM TN+W+ Q W DYKLKW+P +Y G + + VP++ IW PDIVLYNNA G+++V T
Sbjct: 41 NQIMETNLWLKQIWNDYKLKWNPSDYDGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKT 100
Query: 153 KAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPD 212
KA+L Y G+V W PPAI+KS C+IDV YFPFD Q C MKFGSW+YD +DL +L G
Sbjct: 101 KALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDL--VLIGSS 158
Query: 213 SDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNL 272
++L+DY+ S EW I+K P +++ Y+CCEE YPDI +++ +RR LFYT+NL
Sbjct: 159 -------MNLKDYWESGEWAIIKAPGYKHDIKYNCCEEIYPDITYSLYIRRLPLFYTINL 211
Query: 273 IIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYL 332
IIPC+ ISFL+VLVFYLPSD GEKV+LC E IP TSL +PL+G+YL
Sbjct: 212 IIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYL 271
Query: 333 LFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
LFTMI VTLS+V+T+ VLNV++R+P TH M WV +F+ +LP+++F+ RP
Sbjct: 272 LFTMIFVTLSIVITVFVLNVHYRTPTTHTMPAWVKTIFLNLLPRVMFMTRP 322
Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
Identities = 83/167 (49%), Positives = 114/167 (68%)
Query: 38 LYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMT 97
L++ L +YN +IRPV N SD + ++ + +SQL++V+ ++ NQIM
Sbjct: 1 LFERLFEDYNEIIRPVANVSDPVIIQFEVSMSQLVKVD---EV------------NQIME 45
Query: 98 TNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILH 157
TN+W+ Q W DYKLKW+P +Y G + + VP++ IW PDIVLYNNA G+++V TKA+L
Sbjct: 46 TNLWLKQIWNDYKLKWNPSDYDGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLK 105
Query: 158 YDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
Y G+V W PPAI+KS C+IDV YFPFD Q C MKFGSW+YD +DL
Sbjct: 106 YTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDL 152
Score = 139 (54.0 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 22/37 (59%), Positives = 28/37 (75%)
Query: 519 QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
Q W DYKLKW+P +Y G + + VP++ IW PDIVLYN
Sbjct: 52 QIWNDYKLKWNPSDYDGAEFMRVPAQKIWKPDIVLYN 88
>UNIPROTKB|F1PFF3 [details] [associations]
symbol:CHRNA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087732 CTD:1137 KO:K04806 OMA:EDGVRCR
EMBL:AAEX03014142 EMBL:AAEX03014143 RefSeq:XP_543097.3
Ensembl:ENSCAFT00000020498 GeneID:485972 KEGG:cfa:485972
Uniprot:F1PFF3
Length = 618
Score = 870 (311.3 bits), Expect = 4.7e-87, P = 4.7e-87
Identities = 163/293 (55%), Positives = 206/293 (70%)
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
KNQ+MTTNVWV QEW DYKL+W P +Y V ++ +PSE IW PDIVLYNNADG++ VT +
Sbjct: 80 KNQMMTTNVWVKQEWHDYKLRWDPADYENVTSIRIPSELIWRPDIVLYNNADGDFAVTHL 139
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
TKA L YDG+V W PPAIYKS C IDV +FPFD Q C MKFGSWTYD +DL +
Sbjct: 140 TKAHLFYDGRVQWTPPAIYKSSCSIDVTFFPFDQQNCTMKFGSWTYDKAKIDLVSM---- 195
Query: 212 DSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVN 271
++D +DL + S EW I+ N + Y CC E YPDI + +RR LFYT+N
Sbjct: 196 -HSRVD-QLDLWE---SGEWVIVDAVGTYNTRKYECCAEVYPDITYAFVIRRLPLFYTIN 250
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
LIIPC+ IS L+VLVFYLPS+ GEK++LC EIIP TSL +PL+G+Y
Sbjct: 251 LIIPCLLISCLTVLVFYLPSECGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEY 310
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRPA 384
LLFTMI VTLS+V+T+ VLNV+ RSP TH M WV +VF++V+P++LF++RP+
Sbjct: 311 LLFTMIFVTLSIVITVFVLNVHHRSPRTHTMPAWVRRVFLDVVPRLLFMKRPS 363
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 102/199 (51%), Positives = 127/199 (63%)
Query: 6 PPRTAAMHVLFPSLTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMG 65
PP A+ +L + V S + + + E +RL L S YN+ RPV N SD + V G
Sbjct: 10 PPPLPALLLLLGAGFLPVSSHVETRAHAE-ERLLKTLFSGYNKWSRPVANISDVVLVHFG 68
Query: 66 LKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLH 125
L ++QLI+V+ KNQ+MTTNVWV Q EW DYKL+W P +Y V ++
Sbjct: 69 LSIAQLIDVDEKNQMMTTNVWVKQ---------------EWHDYKLRWDPADYENVTSIR 113
Query: 126 VPSEHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDV 185
+PSE IW PDIVLYNNADG++ VT +TKA L YDG+V W PPAIYKS C IDV +FPFD
Sbjct: 114 IPSELIWRPDIVLYNNADGDFAVTHLTKAHLFYDGRVQWTPPAIYKSSCSIDVTFFPFDQ 173
Query: 186 QTCVMKFGSWTYDGYTVDL 204
Q C MKFGSWTYD +DL
Sbjct: 174 QNCTMKFGSWTYDKAKIDL 192
Score = 142 (55.0 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 23/37 (62%), Positives = 28/37 (75%)
Query: 519 QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
QEW DYKL+W P +Y V ++ +PSE IW PDIVLYN
Sbjct: 92 QEWHDYKLRWDPADYENVTSIRIPSELIWRPDIVLYN 128
>MGI|MGI:87888 [details] [associations]
symbol:Chrna4 "cholinergic receptor, nicotinic, alpha
polypeptide 4" species:10090 "Mus musculus" [GO:0001508 "regulation
of action potential" evidence=IMP] [GO:0001666 "response to
hypoxia" evidence=ISO] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=ISO;IGI;IMP;TAS]
[GO:0005216 "ion channel activity" evidence=IDA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005892 "acetylcholine-gated channel
complex" evidence=ISO;IDA;IPI] [GO:0006281 "DNA repair"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0006812 "cation transport"
evidence=IMP;TAS] [GO:0006816 "calcium ion transport" evidence=IGI]
[GO:0006979 "response to oxidative stress" evidence=ISO]
[GO:0007165 "signal transduction" evidence=ISO] [GO:0007271
"synaptic transmission, cholinergic" evidence=ISO;IDA;IMP]
[GO:0007585 "respiratory gaseous exchange" evidence=IMP]
[GO:0007626 "locomotory behavior" evidence=IMP] [GO:0008144 "drug
binding" evidence=ISO] [GO:0009897 "external side of plasma
membrane" evidence=IDA] [GO:0014059 "regulation of dopamine
secretion" evidence=IMP] [GO:0015464 "acetylcholine receptor
activity" evidence=ISO] [GO:0016020 "membrane" evidence=ISO;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0019233
"sensory perception of pain" evidence=IMP;TAS] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030425 "dendrite" evidence=ISO]
[GO:0034220 "ion transmembrane transport" evidence=IGI;IMP;IDA;TAS]
[GO:0035094 "response to nicotine" evidence=ISO;IGI;IMP]
[GO:0035095 "behavioral response to nicotine" evidence=ISO;IMP]
[GO:0035640 "exploration behavior" evidence=IMP] [GO:0042113 "B
cell activation" evidence=IMP] [GO:0042166 "acetylcholine binding"
evidence=ISO] [GO:0042391 "regulation of membrane potential"
evidence=IGI] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050877 "neurological system process"
evidence=ISO;IMP] [GO:0050890 "cognition" evidence=ISO] [GO:0051291
"protein heterooligomerization" evidence=ISO] [GO:0051899 "membrane
depolarization" evidence=IGI;IMP] [GO:0060080 "regulation of
inhibitory postsynaptic membrane potential" evidence=IMP]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 MGI:MGI:87888
GO:GO:0006979 GO:GO:0009897 GO:GO:0014059 GO:GO:0019233
GO:GO:0035095 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0043025 GO:GO:0050890 GO:GO:0030425
GO:GO:0006281 GO:GO:0001666 GO:GO:0007626 GO:GO:0060080
GO:GO:0007271 GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 eggNOG:NOG290206 GO:GO:0005892 GO:GO:0015464
GO:GO:0001508 OrthoDB:EOG480HWN CTD:1137 KO:K04806 GO:GO:0042113
GO:GO:0006816 GO:GO:0051899 EMBL:AF225912 EMBL:AK034228
EMBL:AK083157 EMBL:BC053013 EMBL:AB010002 EMBL:AF325347
IPI:IPI00115712 RefSeq:NP_056545.3 UniGene:Mm.252369
ProteinModelPortal:O70174 SMR:O70174 DIP:DIP-48731N STRING:O70174
PhosphoSite:O70174 PaxDb:O70174 PRIDE:O70174
Ensembl:ENSMUST00000067120 GeneID:11438 KEGG:mmu:11438
BindingDB:O70174 ChEMBL:CHEMBL4457 ChiTaRS:CHRNA4 NextBio:278736
Bgee:O70174 Genevestigator:O70174 GermOnline:ENSMUSG00000027577
GO:GO:0007585 Uniprot:O70174
Length = 629
Score = 870 (311.3 bits), Expect = 4.7e-87, P = 4.7e-87
Identities = 162/293 (55%), Positives = 204/293 (69%)
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
KNQ+MTTNVWV QEW DYKL+W P +Y V ++ +PSE IW PDIVLYNNADG++ VT +
Sbjct: 81 KNQMMTTNVWVKQEWHDYKLRWDPGDYENVTSIRIPSELIWRPDIVLYNNADGDFAVTHL 140
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
TKA L YDG+V W PPAIYKS C IDV +FPFD Q C MKFGSWTYD +DL
Sbjct: 141 TKAHLFYDGRVQWTPPAIYKSSCSIDVTFFPFDQQNCTMKFGSWTYDKAKIDLV------ 194
Query: 212 DSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVN 271
+ +D D++ S EW I+ N + Y CC E YPDI + +RR LFYT+N
Sbjct: 195 ---SMHSRVDQLDFWESGEWVIVDAVGTYNTRKYECCAEIYPDITYAFIIRRLPLFYTIN 251
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
LIIPC+ IS L+VLVFYLPS+ GEKV+LC EIIP TSL +PL+G+Y
Sbjct: 252 LIIPCLLISCLTVLVFYLPSECGEKVTLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEY 311
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRPA 384
LLFTMI VTLS+V+T+ VLNV+ RSP TH M WV +VF++++P++LF++RP+
Sbjct: 312 LLFTMIFVTLSIVITVFVLNVHHRSPRTHTMPAWVRRVFLDIVPRLLFMKRPS 364
Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 101/196 (51%), Positives = 125/196 (63%)
Query: 14 VLFPSLTFLVFSVIIAQGNDEAK-----RLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKL 68
+L P L L ++ A + E + RL L S YN+ RPV N SD + V+ GL +
Sbjct: 13 LLLPLLLLLGTGLLPASSHIETRAHAEERLLKRLFSGYNKWSRPVANISDVVLVRFGLSI 72
Query: 69 SQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPS 128
+QLI+V+ KNQ+MTTNVWV Q EW DYKL+W P +Y V ++ +PS
Sbjct: 73 AQLIDVDEKNQMMTTNVWVKQ---------------EWHDYKLRWDPGDYENVTSIRIPS 117
Query: 129 EHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTC 188
E IW PDIVLYNNADG++ VT +TKA L YDG+V W PPAIYKS C IDV +FPFD Q C
Sbjct: 118 ELIWRPDIVLYNNADGDFAVTHLTKAHLFYDGRVQWTPPAIYKSSCSIDVTFFPFDQQNC 177
Query: 189 VMKFGSWTYDGYTVDL 204
MKFGSWTYD +DL
Sbjct: 178 TMKFGSWTYDKAKIDL 193
Score = 141 (54.7 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 23/37 (62%), Positives = 28/37 (75%)
Query: 519 QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
QEW DYKL+W P +Y V ++ +PSE IW PDIVLYN
Sbjct: 93 QEWHDYKLRWDPGDYENVTSIRIPSELIWRPDIVLYN 129
>UNIPROTKB|P30926 [details] [associations]
symbol:CHRNB4 "Neuronal acetylcholine receptor subunit
beta-4" species:9606 "Homo sapiens" [GO:0030054 "cell junction"
evidence=IEA] [GO:0001508 "regulation of action potential"
evidence=IEA] [GO:0006939 "smooth muscle contraction" evidence=IEA]
[GO:0006940 "regulation of smooth muscle contraction" evidence=IEA]
[GO:0007626 "locomotory behavior" evidence=IEA] [GO:0035095
"behavioral response to nicotine" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=TAS] [GO:0015276 "ligand-gated ion channel activity"
evidence=TAS] [GO:0005892 "acetylcholine-gated channel complex"
evidence=IDA;TAS] [GO:0006811 "ion transport" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IDA] [GO:0015464
"acetylcholine receptor activity" evidence=IDA] [GO:0046928
"regulation of neurotransmitter secretion" evidence=NAS]
[GO:0005887 "integral to plasma membrane" evidence=IC] [GO:0016021
"integral to membrane" evidence=NAS] [GO:0060084 "synaptic
transmission involved in micturition" evidence=IMP] [GO:0007271
"synaptic transmission, cholinergic" evidence=TAS] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] Reactome:REACT_13685 InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0035095 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0046928 GO:GO:0007626
GO:GO:0007271 GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889
eggNOG:NOG290206 GO:GO:0005892 GO:GO:0015464 GO:GO:0001508
GO:GO:0060084 GO:GO:0006940 HOGENOM:HOG000006757 OrthoDB:EOG4HQDJ4
GO:GO:0006939 CTD:1143 KO:K04815 EMBL:U62439 EMBL:U48861
EMBL:Y08416 EMBL:AJ306454 EMBL:AJ306455 EMBL:AJ306456 EMBL:AJ306457
EMBL:AJ306458 EMBL:AJ306459 EMBL:AF306329 EMBL:AF306325
EMBL:AF306326 EMBL:AF306327 EMBL:AF306328 EMBL:BC096080
EMBL:BC096082 EMBL:AF453877 EMBL:X68275 IPI:IPI00028080 PIR:G02421
RefSeq:NP_000741.1 RefSeq:NP_001243496.1 UniGene:Hs.624178 PDB:2ASG
PDBsum:2ASG ProteinModelPortal:P30926 SMR:P30926 STRING:P30926
PhosphoSite:P30926 DMDM:2506129 PRIDE:P30926
Ensembl:ENST00000261751 GeneID:1143 KEGG:hsa:1143 UCSC:uc002bed.1
GeneCards:GC15M078916 HGNC:HGNC:1964 MIM:118509 neXtProt:NX_P30926
PharmGKB:PA26496 InParanoid:P30926 OMA:TPTASMD PhylomeDB:P30926
BindingDB:P30926 ChEMBL:CHEMBL3002 GenomeRNAi:1143 NextBio:4756
ArrayExpress:P30926 Bgee:P30926 CleanEx:HS_CHRNB4
Genevestigator:P30926 GermOnline:ENSG00000117971 Uniprot:P30926
Length = 498
Score = 865 (309.6 bits), Expect = 1.6e-86, P = 1.6e-86
Identities = 175/374 (46%), Positives = 239/374 (63%)
Query: 17 PSLTFLVFSVIIAQGN----DEAKRLYDDLLSN--YNRLIRPVGNNSDKLTVKMGLKLSQ 70
PSL + +GN + ++L DDLL+ YN LIRP ++S +++K+ L L+Q
Sbjct: 5 PSLVLFFLVALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQ 64
Query: 71 LIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEH 130
LI VN + QIMTTNVW LK QEW DY+L W+ Y GV+ L +P++
Sbjct: 65 LISVNEREQIMTTNVW----LK-----------QEWTDYRLTWNSSRYEGVNILRIPAKR 109
Query: 131 IWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVM 190
IWLPDIVLYNNADG YEV++ T I+ +G V+W PPAIYKS C+I+V+YFPFD Q C +
Sbjct: 110 IWLPDIVLYNNADGTYEVSVYTNLIVRSNGSVLWLPPAIYKSACKIEVKYFPFDQQNCTL 169
Query: 191 KFGSWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEE 250
KF SWTYD +D+ +L P + + D+ S EWDI+ +P R ++
Sbjct: 170 KFRSWTYDHTEIDM--VLMTPTAS-------MDDFTPSGEWDIVALPGRRTVN----PQD 216
Query: 251 P-YPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXX 309
P Y D+ ++ ++RK LFYT+NLIIPCV + L++LVFYLPSD GEK++LC
Sbjct: 217 PSYVDVTYDFIIKRKPLFYTINLIIPCVLTTLLAILVFYLPSDCGEKMTLCISVLLALTF 276
Query: 310 XXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKV 369
++I+PPTSL VPL+GKYL+FTM+LVT S+V ++ VLNV+ RSP TH M PWV +
Sbjct: 277 FLLLISKIVPPTSLDVPLIGKYLMFTMVLVTFSIVTSVCVLNVHHRSPSTHTMAPWVKRC 336
Query: 370 FIEVLPKILFIQRP 383
F+ LP LF++RP
Sbjct: 337 FLHKLPTFLFMKRP 350
Score = 145 (56.1 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 495 ELPSKLARLASIHFCDLLTPIN-FL-QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIV 552
+L LA+L S++ + + N +L QEW DY+L W+ Y GV+ L +P++ IWLPDIV
Sbjct: 57 KLQLSLAQLISVNEREQIMTTNVWLKQEWTDYRLTWNSSRYEGVNILRIPAKRIWLPDIV 116
Query: 553 LYN 555
LYN
Sbjct: 117 LYN 119
>ZFIN|ZDB-GENE-090312-91 [details] [associations]
symbol:chrna6 "cholinergic receptor, nicotinic,
alpha 6" species:7955 "Danio rerio" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 ZFIN:ZDB-GENE-090312-91 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
HOVERGEN:HBG003756 GO:GO:0004889 HOGENOM:HOG000006756
eggNOG:NOG290206 OrthoDB:EOG45B1FG CTD:8973 KO:K04808 EMBL:BC171403
EMBL:BC171405 EMBL:DQ822507 IPI:IPI00505006 RefSeq:NP_001036149.1
UniGene:Dr.72302 SMR:Q0PJT9 GeneID:555747 KEGG:dre:555747
InParanoid:Q0PJT9 NextBio:20881142 Uniprot:Q0PJT9
Length = 512
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 165/333 (49%), Positives = 225/333 (67%)
Query: 58 DKLTVKMGLKLSQLIEV--NLKNQIMTT-NVWVNQNLK----NQIMTTNVWVNQEWEDYK 110
D+L ++ + +Q I N+ + + V ++Q +K NQIM TN+W+ W DYK
Sbjct: 28 DRLFRRLFRRYNQFIRPVENVSDPVTVEFEVSISQLVKVDEVNQIMETNLWLRHIWNDYK 87
Query: 111 LKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIY 170
LKWSP E+ G++ + VPS IW PDIVLYNNA G++ V TKA+L +DG + W PPAI+
Sbjct: 88 LKWSPAEFDGIEFIRVPSNKIWRPDIVLYNNAVGDFLVEDKTKALLKFDGTITWVPPAIF 147
Query: 171 KSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVE 230
KS C +D+ YFPFD Q C MKFGSWTYD +DL +L G ++L+D++ S E
Sbjct: 148 KSSCPMDITYFPFDYQNCSMKFGSWTYDKAKIDL--VLIGSK-------VNLKDFWESGE 198
Query: 231 WDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLP 290
W+I+ P +++ Y+CCEE YPDI ++ +RR LFYT+NLIIPC+ ISFL+VLVFYLP
Sbjct: 199 WEIIDAPGYKHDIKYNCCEEIYPDITYSFYIRRLPLFYTINLIIPCLLISFLTVLVFYLP 258
Query: 291 SDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVL 350
SD GEKV+LC E IP TSL +PL+G+YLLFTMI VTLS+V+T+ VL
Sbjct: 259 SDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFVTLSIVITVFVL 318
Query: 351 NVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
NV++R+P+TH M WVH VF+ LP+I+ ++RP
Sbjct: 319 NVHYRTPMTHTMPSWVHTVFLRALPRIMLMRRP 351
Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
Identities = 89/191 (46%), Positives = 120/191 (62%)
Query: 14 VLFPSLTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIE 73
+ F +T + ++G D RL+ L YN+ IRPV N SD +TV+ + +SQL++
Sbjct: 9 LFFLLITLITQDCFSSKGED---RLFRRLFRRYNQFIRPVENVSDPVTVEFEVSISQLVK 65
Query: 74 VNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWL 133
V+ ++ NQIM TN+W+ W DYKLKWSP E+ G++ + VPS IW
Sbjct: 66 VD---EV------------NQIMETNLWLRHIWNDYKLKWSPAEFDGIEFIRVPSNKIWR 110
Query: 134 PDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFG 193
PDIVLYNNA G++ V TKA+L +DG + W PPAI+KS C +D+ YFPFD Q C MKFG
Sbjct: 111 PDIVLYNNAVGDFLVEDKTKALLKFDGTITWVPPAIFKSSCPMDITYFPFDYQNCSMKFG 170
Query: 194 SWTYDGYTVDL 204
SWTYD +DL
Sbjct: 171 SWTYDKAKIDL 181
Score = 144 (55.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 30/79 (37%), Positives = 45/79 (56%)
Query: 479 NQMILMPRPLTWRLPYELPSKLARLASIHFCDLLTPIN-FLQE-WEDYKLKWSPEEYGGV 536
NQ I ++ + E +++L + + + N +L+ W DYKLKWSP E+ G+
Sbjct: 39 NQFIRPVENVSDPVTVEFEVSISQLVKVDEVNQIMETNLWLRHIWNDYKLKWSPAEFDGI 98
Query: 537 DTLHVPSEHIWLPDIVLYN 555
+ + VPS IW PDIVLYN
Sbjct: 99 EFIRVPSNKIWRPDIVLYN 117
>ZFIN|ZDB-GENE-090505-3 [details] [associations]
symbol:chrna4 "cholinergic receptor, nicotinic, alpha
4" species:7955 "Danio rerio" [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005892 "acetylcholine-gated channel complex"
evidence=IDA] [GO:0015464 "acetylcholine receptor activity"
evidence=IDA] [GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236
ZFIN:ZDB-GENE-090505-3 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 eggNOG:NOG290206 GO:GO:0005892
OrthoDB:EOG480HWN GeneTree:ENSGT00620000087732 CTD:1137 KO:K04806
EMBL:BX511174 EMBL:CR762408 EMBL:BC171545 EMBL:DQ822508
IPI:IPI00510761 RefSeq:NP_001041528.1 RefSeq:XP_692148.2
UniGene:Dr.103932 SMR:Q0PJT8 Ensembl:ENSDART00000018614
Ensembl:ENSDART00000104115 GeneID:556619 GeneID:563696
KEGG:dre:556619 KEGG:dre:563696 InParanoid:Q0PJT8 OMA:ESIREDW
NextBio:20881572 Uniprot:Q0PJT8
Length = 627
Score = 860 (307.8 bits), Expect = 5.4e-86, P = 5.4e-86
Identities = 168/336 (50%), Positives = 224/336 (66%)
Query: 48 RLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWE 107
RL++ + N +KL+ + +S ++ V+ I ++ + KNQ+MTTNVWV QEW
Sbjct: 33 RLLQSLFINYNKLSRPVA-NISDVVLVHFGLSIAQL---IDVDEKNQMMTTNVWVKQEWN 88
Query: 108 DYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPP 167
DYKL+W+PEEY V ++ +PSE IW PDIVLYNNADG++ VT +TKA + Y+G++ W PP
Sbjct: 89 DYKLRWNPEEYENVTSIRIPSEIIWRPDIVLYNNADGDFAVTHLTKAQVFYNGRIKWKPP 148
Query: 168 AIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYL 227
AIYKS C IDV +FPFD Q C MKFGSWTYD +DL I D +D DY+
Sbjct: 149 AIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDRAKIDL--ISMASD-------VDQMDYWE 199
Query: 228 SVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVF 287
S EW I+ N K Y CC E YPDI ++ +RR LFYT+NLIIPC+ IS L+VLVF
Sbjct: 200 SGEWVIINAVGTYNIKKYECCTEIYPDITYSFIIRRLPLFYTINLIIPCLLISCLTVLVF 259
Query: 288 YLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTI 347
YLPS+ EK++LC EIIP TSL +PL+G+YLLFTMI VTLS+++T+
Sbjct: 260 YLPSECAEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEYLLFTMIFVTLSIIITV 319
Query: 348 AVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
VLNV+ RS TH M WV ++F+ ++P+ LF++RP
Sbjct: 320 FVLNVHHRSSRTHSMPHWVRQLFLHLVPRYLFMKRP 355
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 100/182 (54%), Positives = 124/182 (68%)
Query: 23 VFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMT 82
VFS+ A + E +RL L NYN+L RPV N SD + V GL ++QLI+V+ KNQ+MT
Sbjct: 20 VFSMSPAHAHAE-ERLLQSLFINYNKLSRPVANISDVVLVHFGLSIAQLIDVDEKNQMMT 78
Query: 83 TNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNA 142
TNVWV Q EW DYKL+W+PEEY V ++ +PSE IW PDIVLYNNA
Sbjct: 79 TNVWVKQ---------------EWNDYKLRWNPEEYENVTSIRIPSEIIWRPDIVLYNNA 123
Query: 143 DGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTV 202
DG++ VT +TKA + Y+G++ W PPAIYKS C IDV +FPFD Q C MKFGSWTYD +
Sbjct: 124 DGDFAVTHLTKAQVFYNGRIKWKPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDRAKI 183
Query: 203 DL 204
DL
Sbjct: 184 DL 185
Score = 152 (58.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 25/37 (67%), Positives = 30/37 (81%)
Query: 519 QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
QEW DYKL+W+PEEY V ++ +PSE IW PDIVLYN
Sbjct: 85 QEWNDYKLRWNPEEYENVTSIRIPSEIIWRPDIVLYN 121
>UNIPROTKB|Q19AE6 [details] [associations]
symbol:CHRNA4 "Neuronal acetylcholine receptor subunit
alpha-4" species:9669 "Mustela putorius furo" [GO:0001666 "response
to hypoxia" evidence=ISS] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=ISS] [GO:0005892
"acetylcholine-gated channel complex" evidence=ISS] [GO:0006281
"DNA repair" evidence=ISS] [GO:0006979 "response to oxidative
stress" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] [GO:0015464 "acetylcholine receptor activity"
evidence=ISS] [GO:0035095 "behavioral response to nicotine"
evidence=ISS] [GO:0050877 "neurological system process"
evidence=ISS] [GO:0050890 "cognition" evidence=ISS]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0006979
GO:GO:0009897 GO:GO:0014059 GO:GO:0019233 GO:GO:0035095
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0050890
GO:GO:0006281 GO:GO:0001666 GO:GO:0007626 GO:GO:0060080
GO:GO:0007271 HOVERGEN:HBG003756 GO:GO:0004889 GO:GO:0005892
GO:GO:0015464 GO:GO:0001508 GO:GO:0042113 GO:GO:0006816
GO:GO:0051899 EMBL:DQ533688 ProteinModelPortal:Q19AE6 SMR:Q19AE6
Uniprot:Q19AE6
Length = 627
Score = 856 (306.4 bits), Expect = 1.4e-85, P = 1.4e-85
Identities = 159/293 (54%), Positives = 203/293 (69%)
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
KNQ+MTTNVWV QEW DYKL+W P +Y V ++ +PSE IW PDIVLYNNADG++ +T +
Sbjct: 81 KNQMMTTNVWVKQEWYDYKLRWDPADYENVTSIRIPSELIWRPDIVLYNNADGDFAITHL 140
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
TKA L +DG+V W PPAIYKS C IDV +FPFD Q C MKFGSWTYD +DL +
Sbjct: 141 TKAHLFHDGRVQWTPPAIYKSSCSIDVTFFPFDQQNCTMKFGSWTYDKAKIDLVSMQSHV 200
Query: 212 DSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVN 271
D +G+ + S EW I+ N + Y CC E YPDI + +RR LFYT+N
Sbjct: 201 DQ----LGL-----WESGEWVIVDAAGTYNTRKYECCAEVYPDITYAFVIRRLPLFYTIN 251
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
LI+PC+ IS L+VLVFYLPSD GEKV+LC EIIP TSL +PL+G+Y
Sbjct: 252 LIVPCLLISCLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEY 311
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRPA 384
LLFTM+ VTLS+V+T+ VLNV+ RSP TH M WV +VF++V+P++L ++RP+
Sbjct: 312 LLFTMVFVTLSIVITVFVLNVHHRSPRTHTMPAWVRRVFLDVVPRLLLMKRPS 364
Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
Identities = 99/199 (49%), Positives = 122/199 (61%)
Query: 6 PPRTAAMHVLFPSLTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMG 65
PP +L FL S + +RL L S YN+ RPV N SD + V G
Sbjct: 10 PPPLLPPLLLLLGAGFLPASSPVETRAHAEERLLKTLFSGYNKWSRPVANISDVVLVHFG 69
Query: 66 LKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLH 125
L ++QLI+V+ KNQ+MTTNVWV Q EW DYKL+W P +Y V ++
Sbjct: 70 LSIAQLIDVDEKNQMMTTNVWVKQ---------------EWYDYKLRWDPADYENVTSIR 114
Query: 126 VPSEHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDV 185
+PSE IW PDIVLYNNADG++ +T +TKA L +DG+V W PPAIYKS C IDV +FPFD
Sbjct: 115 IPSELIWRPDIVLYNNADGDFAITHLTKAHLFHDGRVQWTPPAIYKSSCSIDVTFFPFDQ 174
Query: 186 QTCVMKFGSWTYDGYTVDL 204
Q C MKFGSWTYD +DL
Sbjct: 175 QNCTMKFGSWTYDKAKIDL 193
Score = 140 (54.3 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 23/37 (62%), Positives = 28/37 (75%)
Query: 519 QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
QEW DYKL+W P +Y V ++ +PSE IW PDIVLYN
Sbjct: 93 QEWYDYKLRWDPADYENVTSIRIPSELIWRPDIVLYN 129
>ZFIN|ZDB-GENE-070822-1 [details] [associations]
symbol:chrna3 "cholinergic receptor, nicotinic, alpha
3" species:7955 "Danio rerio" [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236
ZFIN:ZDB-GENE-070822-1 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087732 EMBL:CU640433 IPI:IPI00627307
ProteinModelPortal:F8W5I4 Ensembl:ENSDART00000149976 Uniprot:F8W5I4
Length = 506
Score = 856 (306.4 bits), Expect = 1.4e-85, P = 1.4e-85
Identities = 156/291 (53%), Positives = 208/291 (71%)
Query: 93 NQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMT 152
NQIM TN+W+ W DYKL+W P+++GGV+ + VPS IW PDIVLYNNA G+++V T
Sbjct: 70 NQIMETNLWLRHIWNDYKLRWDPKDFGGVEFIRVPSNKIWKPDIVLYNNAVGDFQVDDKT 129
Query: 153 KAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPD 212
KA+L ++G V W PPAI+KS C+IDV YFPFD Q C MKFGSWTYD +DL +L G
Sbjct: 130 KALLRFNGDVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWTYDKAKIDL--VLIGST 187
Query: 213 SDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNL 272
I+L+D++ S EW I+ P +++ Y+CCEE Y DI +++ +RR LFYT+N+
Sbjct: 188 -------INLKDFWESGEWTIIDAPGYKHDIKYNCCEEIYTDITYSLYIRRLPLFYTINM 240
Query: 273 IIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYL 332
IIPC+ ISFL+VLVFYLPSD GEKV+LC E IP TSL +PL+G+YL
Sbjct: 241 IIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYL 300
Query: 333 LFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
LFTMI VTLS+V+T+ VLNV++R+P TH M WV +VF+ +LP+++F+ RP
Sbjct: 301 LFTMIFVTLSIVITVFVLNVHYRTPKTHTMPCWVRRVFLSLLPRVMFMTRP 351
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 90/194 (46%), Positives = 126/194 (64%)
Query: 11 AMHVLFPSLTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQ 70
A+ + F S + L F + ++ RL+ + S+YN+ IRPV N SD + V+ + +SQ
Sbjct: 3 ALLIFFSSFSPLCFLLSGVCCSEAEHRLFSVIFSSYNQYIRPVENVSDPVVVQFEVSMSQ 62
Query: 71 LIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEH 130
L++V+ ++ NQIM TN+W+ W DYKL+W P+++GGV+ + VPS
Sbjct: 63 LVKVD---EV------------NQIMETNLWLRHIWNDYKLRWDPKDFGGVEFIRVPSNK 107
Query: 131 IWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVM 190
IW PDIVLYNNA G+++V TKA+L ++G V W PPAI+KS C+IDV YFPFD Q C M
Sbjct: 108 IWKPDIVLYNNAVGDFQVDDKTKALLRFNGDVTWIPPAIFKSSCKIDVTYFPFDYQNCTM 167
Query: 191 KFGSWTYDGYTVDL 204
KFGSWTYD +DL
Sbjct: 168 KFGSWTYDKAKIDL 181
Score = 142 (55.0 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 22/35 (62%), Positives = 28/35 (80%)
Query: 521 WEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
W DYKL+W P+++GGV+ + VPS IW PDIVLYN
Sbjct: 83 WNDYKLRWDPKDFGGVEFIRVPSNKIWKPDIVLYN 117
>UNIPROTKB|G1K2Z1 [details] [associations]
symbol:CHRNA3 "Neuronal acetylcholine receptor subunit
alpha-3" species:9031 "Gallus gallus" [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005892 "acetylcholine-gated channel
complex" evidence=IEA] [GO:0006940 "regulation of smooth muscle
contraction" evidence=IEA] [GO:0007171 "activation of transmembrane
receptor protein tyrosine kinase activity" evidence=IEA]
[GO:0007271 "synaptic transmission, cholinergic" evidence=IEA]
[GO:0007626 "locomotory behavior" evidence=IEA] [GO:0014056
"regulation of acetylcholine secretion" evidence=IEA] [GO:0015464
"acetylcholine receptor activity" evidence=IEA] [GO:0035095
"behavioral response to nicotine" evidence=IEA] [GO:0048814
"regulation of dendrite morphogenesis" evidence=IEA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IEA] [GO:0060084 "synaptic transmission involved in
micturition" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087732 EMBL:AADN02040457
Ensembl:ENSGALT00000004759 Uniprot:G1K2Z1
Length = 488
Score = 854 (305.7 bits), Expect = 2.4e-85, P = 2.4e-85
Identities = 157/291 (53%), Positives = 206/291 (70%)
Query: 93 NQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMT 152
NQIM TN+W+ W DYKL+W+P +YGG + + VPS IW PDIVLYNNA G+++V T
Sbjct: 62 NQIMETNLWLKHIWNDYKLRWNPVDYGGAEFIRVPSGQIWKPDIVLYNNAVGDFQVDDKT 121
Query: 153 KAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPD 212
KA+L Y G V W PPAI+KS C+IDV YFPFD Q C MKFGSW+YD +DL +L G
Sbjct: 122 KALLKYTGDVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDL--VLIGST 179
Query: 213 SDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNL 272
++L+DY+ S EW I+K P +++ Y+CCEE Y DI +++ +RR LFYT+N+
Sbjct: 180 -------MNLKDYWESGEWAIIKAPGYKHDIKYNCCEEIYTDITYSLYIRRLPLFYTINM 232
Query: 273 IIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYL 332
IIPC+ ISFL+VLVFYLPSD GEKV+LC E IP TSL +PL+G+YL
Sbjct: 233 IIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYL 292
Query: 333 LFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
LFTMI VTLS+V+T+ VLNV++R+P TH M WV +F+ +LP+I+F+ RP
Sbjct: 293 LFTMIFVTLSIVITVFVLNVHYRTPKTHTMPVWVRTIFLNLLPRIMFMTRP 343
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 86/174 (49%), Positives = 115/174 (66%)
Query: 31 GNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQN 90
G++ RLY L NYN+ +RPV N SD + ++ + +SQL++V+ ++
Sbjct: 15 GSEPEHRLYAALFKNYNQFVRPVKNASDPVIIQFEVSMSQLVKVD---EV---------- 61
Query: 91 LKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTI 150
NQIM TN+W+ W DYKL+W+P +YGG + + VPS IW PDIVLYNNA G+++V
Sbjct: 62 --NQIMETNLWLKHIWNDYKLRWNPVDYGGAEFIRVPSGQIWKPDIVLYNNAVGDFQVDD 119
Query: 151 MTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
TKA+L Y G V W PPAI+KS C+IDV YFPFD Q C MKFGSW+YD +DL
Sbjct: 120 KTKALLKYTGDVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDL 173
Score = 139 (54.0 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 521 WEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
W DYKL+W+P +YGG + + VPS IW PDIVLYN
Sbjct: 75 WNDYKLRWNPVDYGGAEFIRVPSGQIWKPDIVLYN 109
>UNIPROTKB|P09481 [details] [associations]
symbol:CHRNA3 "Neuronal acetylcholine receptor subunit
alpha-3" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 eggNOG:NOG290206 CTD:1136 KO:K04805
EMBL:M37336 EMBL:X07345 EMBL:X07346 EMBL:X07347 IPI:IPI00580530
PIR:S00378 RefSeq:NP_989747.1 UniGene:Gga.5095
ProteinModelPortal:P09481 SMR:P09481 GeneID:386578 KEGG:gga:386578
InParanoid:P09481 OMA:SKGCKEG NextBio:20813941 Uniprot:P09481
Length = 496
Score = 854 (305.7 bits), Expect = 2.4e-85, P = 2.4e-85
Identities = 157/291 (53%), Positives = 206/291 (70%)
Query: 93 NQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMT 152
NQIM TN+W+ W DYKL+W+P +YGG + + VPS IW PDIVLYNNA G+++V T
Sbjct: 69 NQIMETNLWLKHIWNDYKLRWNPVDYGGAEFIRVPSGQIWKPDIVLYNNAVGDFQVDDKT 128
Query: 153 KAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPD 212
KA+L Y G V W PPAI+KS C+IDV YFPFD Q C MKFGSW+YD +DL +L G
Sbjct: 129 KALLKYTGDVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDL--VLIGST 186
Query: 213 SDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNL 272
++L+DY+ S EW I+K P +++ Y+CCEE Y DI +++ +RR LFYT+N+
Sbjct: 187 -------MNLKDYWESGEWAIIKAPGYKHDIKYNCCEEIYTDITYSLYIRRLPLFYTINM 239
Query: 273 IIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYL 332
IIPC+ ISFL+VLVFYLPSD GEKV+LC E IP TSL +PL+G+YL
Sbjct: 240 IIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYL 299
Query: 333 LFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
LFTMI VTLS+V+T+ VLNV++R+P TH M WV +F+ +LP+I+F+ RP
Sbjct: 300 LFTMIFVTLSIVITVFVLNVHYRTPKTHTMPVWVRTIFLNLLPRIMFMTRP 350
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 86/174 (49%), Positives = 115/174 (66%)
Query: 31 GNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQN 90
G++ RLY L NYN+ +RPV N SD + ++ + +SQL++V+ ++
Sbjct: 22 GSEPEHRLYAALFKNYNQFVRPVKNASDPVIIQFEVSMSQLVKVD---EV---------- 68
Query: 91 LKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTI 150
NQIM TN+W+ W DYKL+W+P +YGG + + VPS IW PDIVLYNNA G+++V
Sbjct: 69 --NQIMETNLWLKHIWNDYKLRWNPVDYGGAEFIRVPSGQIWKPDIVLYNNAVGDFQVDD 126
Query: 151 MTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
TKA+L Y G V W PPAI+KS C+IDV YFPFD Q C MKFGSW+YD +DL
Sbjct: 127 KTKALLKYTGDVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDL 180
Score = 139 (54.0 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 521 WEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
W DYKL+W+P +YGG + + VPS IW PDIVLYN
Sbjct: 82 WNDYKLRWNPVDYGGAEFIRVPSGQIWKPDIVLYN 116
>UNIPROTKB|F1NWY0 [details] [associations]
symbol:CHRNA3 "Neuronal acetylcholine receptor subunit
alpha-3" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087732 EMBL:AADN02040457 IPI:IPI00681014
Ensembl:ENSGALT00000034654 Uniprot:F1NWY0
Length = 406
Score = 854 (305.7 bits), Expect = 2.4e-85, P = 2.4e-85
Identities = 157/291 (53%), Positives = 206/291 (70%)
Query: 93 NQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMT 152
NQIM TN+W+ W DYKL+W+P +YGG + + VPS IW PDIVLYNNA G+++V T
Sbjct: 44 NQIMETNLWLKHIWNDYKLRWNPVDYGGAEFIRVPSGQIWKPDIVLYNNAVGDFQVDDKT 103
Query: 153 KAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPD 212
KA+L Y G V W PPAI+KS C+IDV YFPFD Q C MKFGSW+YD +DL +L G
Sbjct: 104 KALLKYTGDVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDL--VLIGST 161
Query: 213 SDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNL 272
++L+DY+ S EW I+K P +++ Y+CCEE Y DI +++ +RR LFYT+N+
Sbjct: 162 -------MNLKDYWESGEWAIIKAPGYKHDIKYNCCEEIYTDITYSLYIRRLPLFYTINM 214
Query: 273 IIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYL 332
IIPC+ ISFL+VLVFYLPSD GEKV+LC E IP TSL +PL+G+YL
Sbjct: 215 IIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYL 274
Query: 333 LFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
LFTMI VTLS+V+T+ VLNV++R+P TH M WV +F+ +LP+I+F+ RP
Sbjct: 275 LFTMIFVTLSIVITVFVLNVHYRTPKTHTMPVWVRTIFLNLLPRIMFMTRP 325
Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
Identities = 85/168 (50%), Positives = 112/168 (66%)
Query: 37 RLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIM 96
RLY L NYN+ +RPV N SD + ++ + +SQL++V+ ++ NQIM
Sbjct: 3 RLYAALFKNYNQFVRPVKNASDPVIIQFEVSMSQLVKVD---EV------------NQIM 47
Query: 97 TTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAIL 156
TN+W+ W DYKL+W+P +YGG + + VPS IW PDIVLYNNA G+++V TKA+L
Sbjct: 48 ETNLWLKHIWNDYKLRWNPVDYGGAEFIRVPSGQIWKPDIVLYNNAVGDFQVDDKTKALL 107
Query: 157 HYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
Y G V W PPAI+KS C+IDV YFPFD Q C MKFGSW+YD +DL
Sbjct: 108 KYTGDVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDL 155
Score = 139 (54.0 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 521 WEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
W DYKL+W+P +YGG + + VPS IW PDIVLYN
Sbjct: 57 WNDYKLRWNPVDYGGAEFIRVPSGQIWKPDIVLYN 91
>UNIPROTKB|Q15822 [details] [associations]
symbol:CHRNA2 "Neuronal acetylcholine receptor subunit
alpha-2" species:9606 "Homo sapiens" [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IDA] [GO:0005892 "acetylcholine-gated channel
complex" evidence=IDA] [GO:0007165 "signal transduction"
evidence=IDA] [GO:0015464 "acetylcholine receptor activity"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=NAS]
[GO:0006811 "ion transport" evidence=NAS] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] Reactome:REACT_13685 InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 DrugBank:DB01199
DrugBank:DB01245 DrugBank:DB00483 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 DrugBank:DB00184 eggNOG:NOG290206 OMA:ACAGHVA
GO:GO:0005892 GO:GO:0015464 CTD:1135 KO:K04804 EMBL:U62431
EMBL:Y16281 EMBL:AF311103 EMBL:BC153866 IPI:IPI00019942
RefSeq:NP_000733.2 UniGene:Hs.57718 ProteinModelPortal:Q15822
SMR:Q15822 STRING:Q15822 PhosphoSite:Q15822 DMDM:308153405
PRIDE:Q15822 Ensembl:ENST00000407991 Ensembl:ENST00000520933
GeneID:1135 KEGG:hsa:1135 UCSC:uc010lur.3 GeneCards:GC08M027374
H-InvDB:HIX0034372 HGNC:HGNC:1956 MIM:118502 MIM:610353
neXtProt:NX_Q15822 Orphanet:98784 PharmGKB:PA26489
InParanoid:Q15822 OrthoDB:EOG480HWN PhylomeDB:Q15822
BindingDB:Q15822 ChEMBL:CHEMBL1794 ChiTaRS:CHRNA2 DrugBank:DB00732
DrugBank:DB00810 DrugBank:DB00411 DrugBank:DB00565 DrugBank:DB00514
DrugBank:DB01334 DrugBank:DB01135 DrugBank:DB00504 DrugBank:DB00657
DrugBank:DB01336 DrugBank:DB00416 DrugBank:DB01226 DrugBank:DB01337
DrugBank:DB01338 DrugBank:DB00728 GenomeRNAi:1135 NextBio:4722
ArrayExpress:Q15822 Bgee:Q15822 CleanEx:HS_CHRNA2
Genevestigator:Q15822 GermOnline:ENSG00000120903 Uniprot:Q15822
Length = 529
Score = 853 (305.3 bits), Expect = 3.0e-85, P = 3.0e-85
Identities = 161/292 (55%), Positives = 198/292 (67%)
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
KNQ+MTTNVW+ QEW DYKL+W+P ++G + +L VPSE IW+PDIVLYNNADG + VT M
Sbjct: 101 KNQMMTTNVWLKQEWSDYKLRWNPTDFGNITSLRVPSEMIWIPDIVLYNNADGEFAVTHM 160
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
TKA L G V W PPAIYKS C IDV +FPFD Q C MKFGSWTYD +DL+ + Q
Sbjct: 161 TKAHLFSTGTVHWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDKAKIDLEQMEQT- 219
Query: 212 DSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVN 271
+DL+DY+ S EW I+ N K Y CC E YPD+ + +RR LFYT+N
Sbjct: 220 --------VDLKDYWESGEWAIVNATGTYNSKKYDCCAEIYPDVTYAFVIRRLPLFYTIN 271
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
LIIPC+ IS L+VLVFYLPSD GEK++LC EIIP TSL +PL+G+Y
Sbjct: 272 LIIPCLLISCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEY 331
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
LLFTMI VTLS+V+T+ VLNV+ RSP TH M WV + +P+ L + RP
Sbjct: 332 LLFTMIFVTLSIVITVFVLNVHHRSPSTHTMPHWVRGALLGCVPRWLLMNRP 383
Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 106/207 (51%), Positives = 128/207 (61%)
Query: 6 PPRTAAMHVLFPSLTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMG 65
PPR + PS T L + D RL+ L YNR RPV N SD + V+ G
Sbjct: 33 PPRAPGDPLSSPSPTALPQGGSHTETED---RLFKHLFRGYNRWARPVPNTSDVVIVRFG 89
Query: 66 LKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLH 125
L ++QLI+V+ KNQ+MTTNVW LK QEW DYKL+W+P ++G + +L
Sbjct: 90 LSIAQLIDVDEKNQMMTTNVW----LK-----------QEWSDYKLRWNPTDFGNITSLR 134
Query: 126 VPSEHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDV 185
VPSE IW+PDIVLYNNADG + VT MTKA L G V W PPAIYKS C IDV +FPFD
Sbjct: 135 VPSEMIWIPDIVLYNNADGEFAVTHMTKAHLFSTGTVHWVPPAIYKSSCSIDVTFFPFDQ 194
Query: 186 QTCVMKFGSWTYDGYTVDLKHILQGPD 212
Q C MKFGSWTYD +DL+ + Q D
Sbjct: 195 QNCKMKFGSWTYDKAKIDLEQMEQTVD 221
Score = 155 (59.6 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 25/45 (55%), Positives = 34/45 (75%)
Query: 511 LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+ T + QEW DYKL+W+P ++G + +L VPSE IW+PDIVLYN
Sbjct: 105 MTTNVWLKQEWSDYKLRWNPTDFGNITSLRVPSEMIWIPDIVLYN 149
>UNIPROTKB|E1BHK0 [details] [associations]
symbol:CHRNA4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] [GO:0051899 "membrane depolarization"
evidence=IEA] [GO:0050890 "cognition" evidence=IEA] [GO:0042113 "B
cell activation" evidence=IEA] [GO:0035095 "behavioral response to
nicotine" evidence=IEA] [GO:0019233 "sensory perception of pain"
evidence=IEA] [GO:0015464 "acetylcholine receptor activity"
evidence=IEA] [GO:0014059 "regulation of dopamine secretion"
evidence=IEA] [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0007271 "synaptic transmission, cholinergic" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IEA]
[GO:0006816 "calcium ion transport" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005892 "acetylcholine-gated channel
complex" evidence=IEA] [GO:0001666 "response to hypoxia"
evidence=IEA] [GO:0001508 "regulation of action potential"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0006979 GO:GO:0009897 GO:GO:0014059
GO:GO:0019233 GO:GO:0035095 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0050890 GO:GO:0006281
GO:GO:0001666 GO:GO:0007626 GO:GO:0060080 GO:GO:0007271
GO:GO:0004889 GO:GO:0005892 GO:GO:0015464 GO:GO:0001508
GeneTree:ENSGT00620000087732 CTD:1137 KO:K04806 OMA:EDGVRCR
GO:GO:0042113 GO:GO:0006816 GO:GO:0051899 EMBL:DAAA02036229
IPI:IPI00710678 RefSeq:NP_001179829.1 UniGene:Bt.35525
Ensembl:ENSBTAT00000022855 GeneID:537251 KEGG:bta:537251
NextBio:20877096 Uniprot:E1BHK0
Length = 614
Score = 853 (305.3 bits), Expect = 3.0e-85, P = 3.0e-85
Identities = 158/293 (53%), Positives = 202/293 (68%)
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
KNQ+MTTNVWV QEW DYKL W P +Y V ++ +PSE IW PDIVLYNNADG++ VT +
Sbjct: 79 KNQMMTTNVWVKQEWHDYKLHWDPADYENVTSIRIPSELIWRPDIVLYNNADGDFAVTHL 138
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
TKA L +DG+V W PPAIYKS C IDV +FPFD Q C MKFGSWTYD +DL
Sbjct: 139 TKAHLFHDGRVQWTPPAIYKSSCSIDVTFFPFDQQNCTMKFGSWTYDKAKIDLV------ 192
Query: 212 DSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVN 271
+ +D D++ S EW I+ N + Y CC E Y DI + +RR LFYT+N
Sbjct: 193 ---SMHSRVDQLDFWDSGEWVIVDAVGTYNTRKYECCAEVYSDITYAFIIRRLPLFYTIN 249
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
LIIPC+ IS L+VLVFYLPS+ GEK++LC EIIP TSL +PL+G+Y
Sbjct: 250 LIIPCLLISCLTVLVFYLPSECGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEY 309
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRPA 384
LLFTMI VTLS+++T+ VLNV+ RSP TH M WV +VF++++P++LF++RP+
Sbjct: 310 LLFTMIFVTLSIIITVFVLNVHHRSPRTHTMPAWVRRVFLDIVPRLLFMKRPS 362
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 94/169 (55%), Positives = 113/169 (66%)
Query: 36 KRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQI 95
+RL L S YN+ RPV N SD + V GL ++QLI+V+ KNQ+MTTNVWV Q
Sbjct: 38 ERLLKKLFSGYNKWSRPVANISDAVLVHFGLSIAQLIDVDEKNQMMTTNVWVKQ------ 91
Query: 96 MTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAI 155
EW DYKL W P +Y V ++ +PSE IW PDIVLYNNADG++ VT +TKA
Sbjct: 92 ---------EWHDYKLHWDPADYENVTSIRIPSELIWRPDIVLYNNADGDFAVTHLTKAH 142
Query: 156 LHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
L +DG+V W PPAIYKS C IDV +FPFD Q C MKFGSWTYD +DL
Sbjct: 143 LFHDGRVQWTPPAIYKSSCSIDVTFFPFDQQNCTMKFGSWTYDKAKIDL 191
Score = 139 (54.0 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 23/37 (62%), Positives = 27/37 (72%)
Query: 519 QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
QEW DYKL W P +Y V ++ +PSE IW PDIVLYN
Sbjct: 91 QEWHDYKLHWDPADYENVTSIRIPSELIWRPDIVLYN 127
>UNIPROTKB|F1RKU7 [details] [associations]
symbol:CHRNB4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060084 "synaptic transmission involved in micturition"
evidence=IEA] [GO:0035095 "behavioral response to nicotine"
evidence=IEA] [GO:0015464 "acetylcholine receptor activity"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0006940 "regulation of smooth muscle contraction" evidence=IEA]
[GO:0006939 "smooth muscle contraction" evidence=IEA] [GO:0001508
"regulation of action potential" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0035095
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007626
GO:GO:0004889 GO:GO:0015464 GO:GO:0001508 GO:GO:0060084
GO:GO:0006940 GO:GO:0006939 GeneTree:ENSGT00620000087691
OMA:TPTASMD EMBL:CT967296 Ensembl:ENSSSCT00000001959 Uniprot:F1RKU7
Length = 495
Score = 852 (305.0 bits), Expect = 3.8e-85, P = 3.8e-85
Identities = 174/373 (46%), Positives = 241/373 (64%)
Query: 14 VLFPSLTFLVFSVIIAQGNDEAKRLYDDLLSN--YNRLIRPVGNNSDKLTVKMGLKLSQL 71
+LF SL L + N E K L DDLL+ YN LIRP ++S +++++ L L+QL
Sbjct: 8 LLF-SLVALCWRGDCRMANAEEK-LMDDLLNKTRYNNLIRPATSSSQVISIQLQLSLAQL 65
Query: 72 IEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHI 131
I VN + QIMTTNVW LK QEW DY+L W+ Y GV+ L +P++ +
Sbjct: 66 ISVNEREQIMTTNVW----LK-----------QEWTDYRLAWNSSRYEGVNILRIPAKRV 110
Query: 132 WLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMK 191
WLPDIVLYNNADG YEV++ T ++ +G ++W PPAIYKS C+I+V++FPFD Q C +K
Sbjct: 111 WLPDIVLYNNADGTYEVSLYTNVLVRSNGSILWLPPAIYKSACKIEVKHFPFDQQNCTLK 170
Query: 192 FGSWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEP 251
F SWTYD +D+ +L+ P + + D+ S EWDI+ +P R ++P
Sbjct: 171 FRSWTYDHTEIDM--VLKSPKAS-------MDDFTPSGEWDIVALPGRRTVN----PQDP 217
Query: 252 -YPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXX 310
Y D+ ++ ++RK LFYT+NLIIPCV I+ L++LVFYLPSD GEK++LC
Sbjct: 218 SYVDVTYDFIIKRKPLFYTINLIIPCVLITSLAILVFYLPSDCGEKMTLCISVLLALTVF 277
Query: 311 XXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVF 370
++I+PPTSL VPL+GKYL+FTM+LVT S+V ++ VLNV+ RSP TH M PWV + F
Sbjct: 278 LLLISKIVPPTSLDVPLIGKYLMFTMVLVTFSIVTSVCVLNVHHRSPSTHTMAPWVKRCF 337
Query: 371 IEVLPKILFIQRP 383
+ LP LF++RP
Sbjct: 338 LHKLPTFLFMKRP 350
Score = 145 (56.1 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 28/63 (44%), Positives = 42/63 (66%)
Query: 495 ELPSKLARLASIHFCDLLTPIN-FL-QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIV 552
+L LA+L S++ + + N +L QEW DY+L W+ Y GV+ L +P++ +WLPDIV
Sbjct: 57 QLQLSLAQLISVNEREQIMTTNVWLKQEWTDYRLAWNSSRYEGVNILRIPAKRVWLPDIV 116
Query: 553 LYN 555
LYN
Sbjct: 117 LYN 119
>RGD|621533 [details] [associations]
symbol:Chrna2 "cholinergic receptor, nicotinic, alpha 2
(neuronal)" species:10116 "Rattus norvegicus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISO;IDA] [GO:0005892 "acetylcholine-gated channel complex"
evidence=ISO;IDA] [GO:0007165 "signal transduction" evidence=ISO]
[GO:0008144 "drug binding" evidence=IDA] [GO:0015464 "acetylcholine
receptor activity" evidence=IEA;ISO] [GO:0016020 "membrane"
evidence=IDA] [GO:0030054 "cell junction" evidence=IEA] [GO:0042166
"acetylcholine binding" evidence=IDA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0051291 "protein heterooligomerization"
evidence=IDA] [GO:0071944 "cell periphery" evidence=ISO]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 RGD:621533
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
HOVERGEN:HBG003756 GO:GO:0004889 HOGENOM:HOG000006756
eggNOG:NOG290206 OMA:ACAGHVA GO:GO:0005892 GO:GO:0015464 CTD:1135
KO:K04804 OrthoDB:EOG480HWN GeneTree:ENSGT00620000087732
EMBL:L10077 EMBL:M20297 EMBL:M20292 EMBL:M20293 EMBL:M20294
EMBL:M20295 EMBL:M20296 EMBL:AY574253 IPI:IPI00196723 PIR:A40110
RefSeq:NP_596911.1 UniGene:Rn.9713 ProteinModelPortal:P12389
SMR:P12389 STRING:P12389 PhosphoSite:P12389
Ensembl:ENSRNOT00000023475 GeneID:170945 KEGG:rno:170945
UCSC:RGD:621533 InParanoid:P12389 BindingDB:P12389
ChEMBL:CHEMBL2584 NextBio:621469 Genevestigator:P12389
GermOnline:ENSRNOG00000017424 Uniprot:P12389
Length = 511
Score = 851 (304.6 bits), Expect = 4.9e-85, P = 4.9e-85
Identities = 161/292 (55%), Positives = 199/292 (68%)
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
KNQ+MTTNVW+ QEW DYKL+W P E+G V +L VPSE IW+PDIVLYNNADG + VT M
Sbjct: 78 KNQMMTTNVWLKQEWNDYKLRWDPAEFGNVTSLRVPSEMIWIPDIVLYNNADGEFAVTHM 137
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
TKA L + G V W PPAIYKS C IDV +FPFD Q C MKFGSWTYD +DL
Sbjct: 138 TKAHLFFTGTVHWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDKAKIDL------- 190
Query: 212 DSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVN 271
++++ +DL+DY+ S EW I+ N K Y CC E YPD+ + +RR LFYT+N
Sbjct: 191 --EQMERTVDLKDYWESGEWAIINATGTYNSKKYDCCAEIYPDVTYYFVIRRLPLFYTIN 248
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
LIIPC+ IS L+VLVFYLPS+ GEK++LC EIIP TSL +PL+G+Y
Sbjct: 249 LIIPCLLISCLTVLVFYLPSECGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEY 308
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
LLFTMI VTLS+V+T+ VLNV+ RSP TH M WV + +P+ L + RP
Sbjct: 309 LLFTMIFVTLSIVITVFVLNVHHRSPSTHNMPNWVRVALLGRVPRWLMMNRP 360
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 104/188 (55%), Positives = 126/188 (67%)
Query: 22 LVFSVIIAQGND-EAK-RLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQ 79
LV +V+ QG+ A+ RL+ L YNR RPV N SD + V+ GL ++QLI+V+ KNQ
Sbjct: 21 LVPAVLTQQGSHTHAEDRLFKHLFGGYNRWARPVPNTSDVVIVRFGLSIAQLIDVDEKNQ 80
Query: 80 IMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLY 139
+MTTNVW LK QEW DYKL+W P E+G V +L VPSE IW+PDIVLY
Sbjct: 81 MMTTNVW----LK-----------QEWNDYKLRWDPAEFGNVTSLRVPSEMIWIPDIVLY 125
Query: 140 NNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDG 199
NNADG + VT MTKA L + G V W PPAIYKS C IDV +FPFD Q C MKFGSWTYD
Sbjct: 126 NNADGEFAVTHMTKAHLFFTGTVHWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDK 185
Query: 200 YTVDLKHI 207
+DL+ +
Sbjct: 186 AKIDLEQM 193
Score = 158 (60.7 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 27/45 (60%), Positives = 33/45 (73%)
Query: 511 LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+ T + QEW DYKL+W P E+G V +L VPSE IW+PDIVLYN
Sbjct: 82 MTTNVWLKQEWNDYKLRWDPAEFGNVTSLRVPSEMIWIPDIVLYN 126
>UNIPROTKB|P18845 [details] [associations]
symbol:chrna3 "Neuronal acetylcholine receptor subunit
alpha-3" species:7957 "Carassius auratus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISS] [GO:0005892 "acetylcholine-gated channel complex"
evidence=ISS] [GO:0007165 "signal transduction" evidence=ISS]
[GO:0007399 "nervous system development" evidence=ISS] [GO:0015464
"acetylcholine receptor activity" evidence=ISS] [GO:0035095
"behavioral response to nicotine" evidence=ISS] [GO:0060084
"synaptic transmission involved in micturition" evidence=ISS]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0007399
GO:GO:0035095 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889 GO:GO:0005892
GO:GO:0015464 GO:GO:0060084 EMBL:X54051 PIR:S11230
ProteinModelPortal:P18845 SMR:P18845 Uniprot:P18845
Length = 512
Score = 851 (304.6 bits), Expect = 4.9e-85, P = 4.9e-85
Identities = 162/333 (48%), Positives = 223/333 (66%)
Query: 58 DKLTVKMGLKLSQLIEV--NLKNQIMTT-NVWVNQNLK----NQIMTTNVWVNQEWEDYK 110
D+L ++ + +Q I N+ + + V ++Q +K NQIM TN+W+ W DYK
Sbjct: 28 DRLFRRLFRRYNQFIRPVENVSDPVTVEFEVSISQLVKVDEVNQIMETNLWLRHIWNDYK 87
Query: 111 LKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIY 170
LKW P E+ G++ + VPS IW PDIVLYNNA G++ V TKA+L YDG + W PPAI+
Sbjct: 88 LKWLPAEFDGIEFIRVPSNKIWRPDIVLYNNAVGDFLVEDKTKALLKYDGTITWVPPAIF 147
Query: 171 KSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVE 230
KS C +D+ YFPFD Q C MKFGSWTYD +DL +L G ++L+D++ S E
Sbjct: 148 KSSCPMDITYFPFDYQNCSMKFGSWTYDKAKIDL--VLIGSK-------VNLKDFWESGE 198
Query: 231 WDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLP 290
W+I+ P +++ Y+CCEE YPDI ++ +RR LFYT+NLIIPC+ ISFL++LVFYLP
Sbjct: 199 WEIIDAPGYKHDIKYNCCEEIYPDITYSFYIRRLPLFYTINLIIPCLLISFLTILVFYLP 258
Query: 291 SDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVL 350
SD GEKV+LC E IP TSL +PL+G+YLLFTMI VTLS+V+T+ VL
Sbjct: 259 SDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFVTLSIVITVFVL 318
Query: 351 NVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
NV++R+P+TH M WV VF+ LP+++ ++RP
Sbjct: 319 NVHYRTPMTHTMPSWVRTVFLRALPRVMLMRRP 351
Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
Identities = 91/196 (46%), Positives = 123/196 (62%)
Query: 9 TAAMHVLFPSLTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKL 68
+A+ LF LT L+ ++ ++ RL+ L YN+ IRPV N SD +TV+ + +
Sbjct: 3 SASRITLFFLLTVLITQECLSSKGED--RLFRRLFRRYNQFIRPVENVSDPVTVEFEVSI 60
Query: 69 SQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPS 128
SQL++V+ ++ NQIM TN+W+ W DYKLKW P E+ G++ + VPS
Sbjct: 61 SQLVKVD---EV------------NQIMETNLWLRHIWNDYKLKWLPAEFDGIEFIRVPS 105
Query: 129 EHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTC 188
IW PDIVLYNNA G++ V TKA+L YDG + W PPAI+KS C +D+ YFPFD Q C
Sbjct: 106 NKIWRPDIVLYNNAVGDFLVEDKTKALLKYDGTITWVPPAIFKSSCPMDITYFPFDYQNC 165
Query: 189 VMKFGSWTYDGYTVDL 204
MKFGSWTYD +DL
Sbjct: 166 SMKFGSWTYDKAKIDL 181
Score = 138 (53.6 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 29/79 (36%), Positives = 44/79 (55%)
Query: 479 NQMILMPRPLTWRLPYELPSKLARLASIHFCDLLTPIN-FLQE-WEDYKLKWSPEEYGGV 536
NQ I ++ + E +++L + + + N +L+ W DYKLKW P E+ G+
Sbjct: 39 NQFIRPVENVSDPVTVEFEVSISQLVKVDEVNQIMETNLWLRHIWNDYKLKWLPAEFDGI 98
Query: 537 DTLHVPSEHIWLPDIVLYN 555
+ + VPS IW PDIVLYN
Sbjct: 99 EFIRVPSNKIWRPDIVLYN 117
>UNIPROTKB|E2RHB4 [details] [associations]
symbol:CHRNB4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087691 OMA:TPTASMD EMBL:AAEX03008990
EMBL:AAEX03008991 Ensembl:ENSCAFT00000002676 NextBio:20856784
Uniprot:E2RHB4
Length = 508
Score = 851 (304.6 bits), Expect = 4.9e-85, P = 4.9e-85
Identities = 170/355 (47%), Positives = 234/355 (65%)
Query: 32 NDEAKRLYDDLLSN--YNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQ 89
N E K L DDLL+ YN LIRP +++ +++++ L L+QLI VN + QIMTTNVW
Sbjct: 25 NAEEK-LVDDLLNRTRYNNLIRPATSSAQLISIQLQLSLAQLISVNEREQIMTTNVW--- 80
Query: 90 NLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVT 149
LK QEW DY+L W+ Y GV+ L +P++ IWLPDIVLYNNADG YEV+
Sbjct: 81 -LK-----------QEWTDYRLAWNSSRYEGVNILRIPAKRIWLPDIVLYNNADGTYEVS 128
Query: 150 IMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQ 209
+ T ++ +G ++W PPAIYKS C+I+V++FPFD Q C +KF SWTYD +D+ +L+
Sbjct: 129 LYTNVVVRSNGSILWLPPAIYKSACKIEVKHFPFDQQNCTLKFRSWTYDHTEIDM--VLK 186
Query: 210 GPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEP-YPDIIFNITLRRKTLFY 268
P + + D+ S EWDI+ +P R ++P Y D+ ++ LRRK LFY
Sbjct: 187 SPTAS-------MDDFTPSGEWDIVALPGRRTVN----PQDPSYVDVTYDFILRRKPLFY 235
Query: 269 TVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLL 328
T+NLIIPC+ I+ L++LVFYLPSD GEK++LC ++I+PPTSL VPL+
Sbjct: 236 TINLIIPCLLITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLI 295
Query: 329 GKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
GKYL+FTM+LVT S+V ++ VLNV+ RSP TH M PWV + F+ LP LF++RP
Sbjct: 296 GKYLMFTMVLVTFSIVTSVCVLNVHHRSPSTHTMAPWVRRCFLHKLPTFLFMKRP 350
Score = 146 (56.5 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 495 ELPSKLARLASIHFCDLLTPIN-FL-QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIV 552
+L LA+L S++ + + N +L QEW DY+L W+ Y GV+ L +P++ IWLPDIV
Sbjct: 57 QLQLSLAQLISVNEREQIMTTNVWLKQEWTDYRLAWNSSRYEGVNILRIPAKRIWLPDIV 116
Query: 553 LYN 555
LYN
Sbjct: 117 LYN 119
>MGI|MGI:87886 [details] [associations]
symbol:Chrna2 "cholinergic receptor, nicotinic, alpha
polypeptide 2 (neuronal)" species:10090 "Mus musculus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISO] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005892 "acetylcholine-gated channel complex" evidence=ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=ISO]
[GO:0008144 "drug binding" evidence=ISO] [GO:0015464 "acetylcholine
receptor activity" evidence=ISO] [GO:0016020 "membrane"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0042166
"acetylcholine binding" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0051291 "protein heterooligomerization" evidence=ISO]
[GO:0071944 "cell periphery" evidence=IDA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 MGI:MGI:87886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 eggNOG:NOG290206 GO:GO:0005892 GO:GO:0015464
CTD:1135 KO:K04804 OrthoDB:EOG480HWN EMBL:AY574261 EMBL:BC011490
IPI:IPI00128446 RefSeq:NP_659052.1 UniGene:Mm.57350
ProteinModelPortal:Q91X60 SMR:Q91X60 STRING:Q91X60
PhosphoSite:Q91X60 PRIDE:Q91X60 Ensembl:ENSMUST00000022620
GeneID:110902 KEGG:mmu:110902 UCSC:uc007ujx.1
GeneTree:ENSGT00620000087732 InParanoid:Q91X60 OMA:EDENICM
NextBio:364901 Bgee:Q91X60 Genevestigator:Q91X60
GermOnline:ENSMUSG00000022041 GO:GO:0071944 Uniprot:Q91X60
Length = 512
Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
Identities = 160/292 (54%), Positives = 199/292 (68%)
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
KNQ+MTTNVW+ QEW DYKL+W P E+G + +L VPSE IW+PDIVLYNNADG + VT M
Sbjct: 78 KNQMMTTNVWLKQEWNDYKLRWDPAEFGNITSLRVPSEMIWIPDIVLYNNADGEFAVTHM 137
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
TKA L + G V W PPAIYKS C IDV +FPFD Q C MKFGSWTYD +DL
Sbjct: 138 TKAHLFFTGTVHWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDKAKIDL------- 190
Query: 212 DSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVN 271
++++ +DL+DY+ S EW I+ N K Y CC E YPD+ + +RR LFYT+N
Sbjct: 191 --EQMERTVDLKDYWESGEWAIINATGTYNSKKYDCCAEIYPDVTYYFVIRRLPLFYTIN 248
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
LIIPC+ IS L+VLVFYLPS+ GEK++LC EIIP TSL +PL+G+Y
Sbjct: 249 LIIPCLLISCLTVLVFYLPSECGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEY 308
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
LLFTMI VTLS+V+T+ VLNV+ RSP TH M WV + +P+ L + RP
Sbjct: 309 LLFTMIFVTLSIVITVFVLNVHHRSPSTHNMPNWVRVALLGRVPRWLMMNRP 360
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 102/188 (54%), Positives = 126/188 (67%)
Query: 22 LVFSVIIAQGND-EAK-RLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQ 79
L+ +V+ QG+ A+ RL+ L YNR RPV N SD + V+ GL ++QLI+V+ KNQ
Sbjct: 21 LMPAVLAQQGSHTHAEDRLFKHLFGGYNRWARPVPNTSDVVIVRFGLSIAQLIDVDEKNQ 80
Query: 80 IMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLY 139
+MTTNVW LK QEW DYKL+W P E+G + +L VPSE IW+PDIVLY
Sbjct: 81 MMTTNVW----LK-----------QEWNDYKLRWDPAEFGNITSLRVPSEMIWIPDIVLY 125
Query: 140 NNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDG 199
NNADG + VT MTKA L + G V W PPAIYKS C IDV +FPFD Q C MKFGSWTYD
Sbjct: 126 NNADGEFAVTHMTKAHLFFTGTVHWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDK 185
Query: 200 YTVDLKHI 207
+DL+ +
Sbjct: 186 AKIDLEQM 193
Score = 157 (60.3 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 511 LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+ T + QEW DYKL+W P E+G + +L VPSE IW+PDIVLYN
Sbjct: 82 MTTNVWLKQEWNDYKLRWDPAEFGNITSLRVPSEMIWIPDIVLYN 126
>UNIPROTKB|E2R3I1 [details] [associations]
symbol:CHRNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015464 "acetylcholine receptor activity"
evidence=IEA] [GO:0005892 "acetylcholine-gated channel complex"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0004889 OMA:ACAGHVA GO:GO:0005892
GO:GO:0015464 GeneTree:ENSGT00620000087732 EMBL:AAEX03014346
ProteinModelPortal:E2R3I1 Ensembl:ENSCAFT00000013549 Uniprot:E2R3I1
Length = 531
Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
Identities = 161/292 (55%), Positives = 198/292 (67%)
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
KNQ+MTTNVW+ QEW DYKL W+P ++G + +L VPSE IW+PDIVLYNNADG + VT M
Sbjct: 101 KNQMMTTNVWLKQEWTDYKLHWNPADFGNITSLRVPSEMIWIPDIVLYNNADGEFAVTHM 160
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
TKA L G V W PPAIYKS C IDV +FPFD Q C MKFGSWTYD +DL+ + Q
Sbjct: 161 TKAHLFSTGTVHWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDKAKIDLEQMEQM- 219
Query: 212 DSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVN 271
+DL+DY+ S EW I+ N K Y CC E YPD+ + +RR LFYT+N
Sbjct: 220 --------VDLKDYWESGEWAIVNATGTYNTKKYDCCAEIYPDVTYYFVIRRLPLFYTIN 271
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
LIIPC+ IS L+VLVFYLPSD GEK++LC +IIP TSL +PL+G+Y
Sbjct: 272 LIIPCLLISCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITDIIPSTSLVIPLIGEY 331
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
LLFTMI VTLS+V+T+ VLNV+ RSP TH M WV F+ +P+ L + RP
Sbjct: 332 LLFTMIFVTLSIVITVFVLNVHHRSPSTHTMPRWVRVAFLGCVPRWLLMNRP 383
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 102/197 (51%), Positives = 125/197 (63%)
Query: 17 PSLTFLVFSVIIAQGNDEAK-RLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVN 75
P +FL + +A+ RL+ L YNR RPV N SD + V+ GL ++QLI+V+
Sbjct: 40 PHSSFLFTGSAQRASHTQAEDRLFKHLFKGYNRWARPVPNTSDVVIVRFGLSIAQLIDVD 99
Query: 76 LKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPD 135
KNQ+MTTNVW LK QEW DYKL W+P ++G + +L VPSE IW+PD
Sbjct: 100 EKNQMMTTNVW----LK-----------QEWTDYKLHWNPADFGNITSLRVPSEMIWIPD 144
Query: 136 IVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSW 195
IVLYNNADG + VT MTKA L G V W PPAIYKS C IDV +FPFD Q C MKFGSW
Sbjct: 145 IVLYNNADGEFAVTHMTKAHLFSTGTVHWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSW 204
Query: 196 TYDGYTVDLKHILQGPD 212
TYD +DL+ + Q D
Sbjct: 205 TYDKAKIDLEQMEQMVD 221
Score = 151 (58.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 25/45 (55%), Positives = 33/45 (73%)
Query: 511 LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+ T + QEW DYKL W+P ++G + +L VPSE IW+PDIVLYN
Sbjct: 105 MTTNVWLKQEWTDYKLHWNPADFGNITSLRVPSEMIWIPDIVLYN 149
>UNIPROTKB|F1RJS5 [details] [associations]
symbol:CHRNA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015464 "acetylcholine receptor activity" evidence=IEA]
[GO:0005892 "acetylcholine-gated channel complex" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889 OMA:ACAGHVA
GO:GO:0005892 GO:GO:0015464 GeneTree:ENSGT00620000087732
EMBL:CU633626 Ensembl:ENSSSCT00000010597 Uniprot:F1RJS5
Length = 538
Score = 847 (303.2 bits), Expect = 1.3e-84, P = 1.3e-84
Identities = 161/292 (55%), Positives = 197/292 (67%)
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
KNQ+MTTNVW+ QEW DYKL+W+P ++ + +L VPSE IW+PDIVLYNNADG + VT M
Sbjct: 103 KNQMMTTNVWLKQEWSDYKLRWNPADFDNITSLRVPSEMIWIPDIVLYNNADGEFAVTHM 162
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
TKA L G V W PPAIYKS C IDV +FPFD Q C MKFGSWTYD +DL + Q
Sbjct: 163 TKAHLFSSGTVHWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDKAKIDLVQMEQT- 221
Query: 212 DSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVN 271
+DL+DY+ S EW I+ N K Y CC E YPD+ + +RR LFYT+N
Sbjct: 222 --------VDLKDYWESGEWAIVNATGTYNSKKYDCCAEIYPDVTYAFVIRRLPLFYTIN 273
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
LIIPC+ IS L+VLVFYLPSD GEK++LC EIIP TSL +PL+G+Y
Sbjct: 274 LIIPCLLISCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEY 333
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
LLFTMI VTLS+V+T+ VLNV+ RSP TH M WV F+ +P+ L + RP
Sbjct: 334 LLFTMIFVTLSIVITVFVLNVHHRSPSTHNMPHWVRVAFLGCVPRWLLMSRP 385
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 97/176 (55%), Positives = 116/176 (65%)
Query: 37 RLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIM 96
RL+ L YNR RPV N SD + V+ GL ++QLI+V+ KNQ+MTTNVW LK
Sbjct: 63 RLFKHLFRGYNRWARPVPNTSDVVIVRFGLSIAQLIDVDEKNQMMTTNVW----LK---- 114
Query: 97 TTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAIL 156
QEW DYKL+W+P ++ + +L VPSE IW+PDIVLYNNADG + VT MTKA L
Sbjct: 115 -------QEWSDYKLRWNPADFDNITSLRVPSEMIWIPDIVLYNNADGEFAVTHMTKAHL 167
Query: 157 HYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPD 212
G V W PPAIYKS C IDV +FPFD Q C MKFGSWTYD +DL + Q D
Sbjct: 168 FSSGTVHWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDKAKIDLVQMEQTVD 223
Score = 148 (57.2 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 511 LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+ T + QEW DYKL+W+P ++ + +L VPSE IW+PDIVLYN
Sbjct: 107 MTTNVWLKQEWSDYKLRWNPADFDNITSLRVPSEMIWIPDIVLYN 151
>UNIPROTKB|E2RC61 [details] [associations]
symbol:CHRNA6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051899 "membrane depolarization"
evidence=IEA] [GO:0014059 "regulation of dopamine secretion"
evidence=IEA] [GO:0005892 "acetylcholine-gated channel complex"
evidence=IEA] [GO:0004889 "acetylcholine-activated cation-selective
channel activity" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0014059
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GO:GO:0005892 GeneTree:ENSGT00620000087732 GO:GO:0051899 CTD:8973
KO:K04808 EMBL:AAEX03010368 RefSeq:XP_539951.2
ProteinModelPortal:E2RC61 Ensembl:ENSCAFT00000008765 GeneID:482836
KEGG:cfa:482836 OMA:MRNQNET NextBio:20857349 Uniprot:E2RC61
Length = 494
Score = 843 (301.8 bits), Expect = 3.4e-84, P = 3.4e-84
Identities = 153/310 (49%), Positives = 214/310 (69%)
Query: 74 VNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWL 133
V + ++ T + N + NQIM TN+W+ W DYKL+W+P EY G++TL VP++ IW
Sbjct: 59 VTVHFEVAITQL-ANVDEVNQIMETNLWLRHIWNDYKLRWNPMEYDGIETLRVPADRIWK 117
Query: 134 PDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFG 193
PDIVLYNNA G+++V TKA+L YDG ++W PPAI+KS C +D+ +FPFD Q C +KFG
Sbjct: 118 PDIVLYNNAVGDFQVEGKTKALLKYDGMIIWTPPAIFKSSCPMDITFFPFDHQNCSLKFG 177
Query: 194 SWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYP 253
SWTYD +DL ++ G +D+ D++ + EW+I+ +++ Y+CCEE Y
Sbjct: 178 SWTYDKAEIDL--LIIGSK-------VDMNDFWENSEWEIVDASGYKHDIKYNCCEEIYT 228
Query: 254 DIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXX 313
DI ++ +RR +FYT+NLIIPC+ ISFL+VLVFYLPSD GEKV+LC
Sbjct: 229 DITYSFYIRRLPMFYTINLIIPCLFISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLV 288
Query: 314 XAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEV 373
E IP TSL +PL+G+YLLFTMI VTLS+ VT+ VLN+++R+P TH M WV VF+++
Sbjct: 289 ITETIPSTSLVIPLVGEYLLFTMIFVTLSIAVTVFVLNIHYRTPATHTMPKWVKTVFLQL 348
Query: 374 LPKILFIQRP 383
LP+IL ++RP
Sbjct: 349 LPQILMMRRP 358
Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
Identities = 84/169 (49%), Positives = 115/169 (68%)
Query: 36 KRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQI 95
+RL+ L S+YN+ IRPV N SD +TV + ++QL V+ ++ NQI
Sbjct: 35 ERLFHKLFSHYNQFIRPVENVSDPVTVHFEVAITQLANVD---EV------------NQI 79
Query: 96 MTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAI 155
M TN+W+ W DYKL+W+P EY G++TL VP++ IW PDIVLYNNA G+++V TKA+
Sbjct: 80 METNLWLRHIWNDYKLRWNPMEYDGIETLRVPADRIWKPDIVLYNNAVGDFQVEGKTKAL 139
Query: 156 LHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
L YDG ++W PPAI+KS C +D+ +FPFD Q C +KFGSWTYD +DL
Sbjct: 140 LKYDGMIIWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWTYDKAEIDL 188
Score = 150 (57.9 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 27/58 (46%), Positives = 41/58 (70%)
Query: 500 LARLASIHFCDLLTPIN-FLQE-WEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+ +LA++ + + N +L+ W DYKL+W+P EY G++TL VP++ IW PDIVLYN
Sbjct: 67 ITQLANVDEVNQIMETNLWLRHIWNDYKLRWNPMEYDGIETLRVPADRIWKPDIVLYN 124
>UNIPROTKB|F1NA49 [details] [associations]
symbol:CHRNB3 "Neuronal acetylcholine receptor subunit
beta-3" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087732 EMBL:AADN02066018 IPI:IPI00680243
Ensembl:ENSGALT00000032795 Uniprot:F1NA49
Length = 324
Score = 841 (301.1 bits), Expect = 5.6e-84, P = 5.6e-84
Identities = 171/341 (50%), Positives = 227/341 (66%)
Query: 42 LLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVW 101
L Y + +RPV N++D + V GLK+SQL++V+ KNQ+MTTNVW LK
Sbjct: 10 LFQGYQKWVRPVENSNDTIKVLFGLKISQLVDVDEKNQLMTTNVW----LK--------- 56
Query: 102 VNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHYDGK 161
QEW D+KL W+PEEYGG+ + VPSE +WLPDIVL+ NADG +E ++MTKAI+ Y+G
Sbjct: 57 --QEWMDHKLSWNPEEYGGITAIRVPSESLWLPDIVLFENADGRFEGSLMTKAIVKYNGV 114
Query: 162 VVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSDKIDIGID 221
V W PPA YKS C +DV +FPFD Q C MKFGSWTYDG VDL IL +D +D
Sbjct: 115 VTWMPPASYKSSCTMDVTFFPFDRQNCSMKFGSWTYDGSMVDL--IL-------VDENVD 165
Query: 222 LQDYYLSVEWDIMKVPAVR-NEK--FYSCCEEPYPDIIFNITLRRKTLFYTVNLIIPCVG 278
+D++ + EW+I+ ++ N K YS YP + ++ LRR LFYT+ LIIPC+G
Sbjct: 166 RKDFFDNGEWEILNAKGMKGNRKDGLYS-----YPFVTYSFVLRRLPLFYTLFLIIPCLG 220
Query: 279 ISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLFTMIL 338
+SFL+VLVFYLPSD GEK+SL EIIP +S +PL+G+YLLF MI
Sbjct: 221 LSFLTVLVFYLPSDEGEKLSLSTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLLFIMIF 280
Query: 339 VTLSVVVTIAVLNVNFRSPVT-HVMKPWVHKVFIEVLPKIL 378
VTLS++VT+ V+NV+ RS T H M PWV ++F++ LP++L
Sbjct: 281 VTLSIIVTVFVINVHHRSSATYHPMAPWVKRLFLQKLPRLL 321
Score = 154 (59.3 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 29/58 (50%), Positives = 41/58 (70%)
Query: 499 KLARLASIHFCDLLTPIN-FL-QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLY 554
K+++L + + L N +L QEW D+KL W+PEEYGG+ + VPSE +WLPDIVL+
Sbjct: 35 KISQLVDVDEKNQLMTTNVWLKQEWMDHKLSWNPEEYGGITAIRVPSESLWLPDIVLF 92
>UNIPROTKB|F1NKI4 [details] [associations]
symbol:CHRNB3 "Neuronal acetylcholine receptor subunit
beta-3" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087732 IPI:IPI00602078 OMA:INENVDR
EMBL:AADN02066018 Ensembl:ENSGALT00000024820 Uniprot:F1NKI4
Length = 455
Score = 841 (301.1 bits), Expect = 5.6e-84, P = 5.6e-84
Identities = 171/341 (50%), Positives = 227/341 (66%)
Query: 42 LLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVW 101
L Y + +RPV N++D + V GLK+SQL++V+ KNQ+MTTNVW LK
Sbjct: 33 LFQGYQKWVRPVENSNDTIKVLFGLKISQLVDVDEKNQLMTTNVW----LK--------- 79
Query: 102 VNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHYDGK 161
QEW D+KL W+PEEYGG+ + VPSE +WLPDIVL+ NADG +E ++MTKAI+ Y+G
Sbjct: 80 --QEWMDHKLSWNPEEYGGITAIRVPSESLWLPDIVLFENADGRFEGSLMTKAIVKYNGV 137
Query: 162 VVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSDKIDIGID 221
V W PPA YKS C +DV +FPFD Q C MKFGSWTYDG VDL IL +D +D
Sbjct: 138 VTWMPPASYKSSCTMDVTFFPFDRQNCSMKFGSWTYDGSMVDL--IL-------VDENVD 188
Query: 222 LQDYYLSVEWDIMKVPAVR-NEK--FYSCCEEPYPDIIFNITLRRKTLFYTVNLIIPCVG 278
+D++ + EW+I+ ++ N K YS YP + ++ LRR LFYT+ LIIPC+G
Sbjct: 189 RKDFFDNGEWEILNAKGMKGNRKDGLYS-----YPFVTYSFVLRRLPLFYTLFLIIPCLG 243
Query: 279 ISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLFTMIL 338
+SFL+VLVFYLPSD GEK+SL EIIP +S +PL+G+YLLF MI
Sbjct: 244 LSFLTVLVFYLPSDEGEKLSLSTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLLFIMIF 303
Query: 339 VTLSVVVTIAVLNVNFRSPVT-HVMKPWVHKVFIEVLPKIL 378
VTLS++VT+ V+NV+ RS T H M PWV ++F++ LP++L
Sbjct: 304 VTLSIIVTVFVINVHHRSSATYHPMAPWVKRLFLQKLPRLL 344
Score = 154 (59.3 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 29/58 (50%), Positives = 41/58 (70%)
Query: 499 KLARLASIHFCDLLTPIN-FL-QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLY 554
K+++L + + L N +L QEW D+KL W+PEEYGG+ + VPSE +WLPDIVL+
Sbjct: 58 KISQLVDVDEKNQLMTTNVWLKQEWMDHKLSWNPEEYGGITAIRVPSESLWLPDIVLF 115
>WB|WBGene00000051 [details] [associations]
symbol:acr-12 species:6239 "Caenorhabditis elegans"
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 HSSP:P02711 GO:GO:0004889
GeneTree:ENSGT00630000089708 KO:K05312 EMBL:Z68118 EMBL:AF187013
PIR:T23843 RefSeq:NP_510262.1 UniGene:Cel.19447
ProteinModelPortal:G5EDF1 SMR:G5EDF1 EnsemblMetazoa:R01E6.4
GeneID:181475 KEGG:cel:CELE_R01E6.4 CTD:181475 WormBase:R01E6.4
OMA:RYLITTM NextBio:914100 Uniprot:G5EDF1
Length = 573
Score = 841 (301.1 bits), Expect = 5.6e-84, P = 5.6e-84
Identities = 166/362 (45%), Positives = 230/362 (63%)
Query: 33 DEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLK 92
D +LY+DLL +YN++ RPV N+SD LTV +G L ++I+V+ KNQ++TTN+W+
Sbjct: 36 DLESQLYEDLLFDYNKVPRPVKNSSDILTVDVGASLIRIIDVDEKNQVLTTNLWLEM--- 92
Query: 93 NQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMT 152
+W D KL W+PE+YGG+ TLH+PS+ IW PD+VLYNNA G+ ++TI+T
Sbjct: 93 ------------KWNDAKLTWTPEKYGGLKTLHIPSDFIWTPDLVLYNNAAGDPDITILT 140
Query: 153 KAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP- 211
A++ ++G V W PPAIYKSFC IDV +FP+D Q C MKFG+WTY G VDLK + Q
Sbjct: 141 DALVTFEGNVYWQPPAIYKSFCPIDVTWFPYDSQKCEMKFGTWTYTGRYVDLKQLPQEEV 200
Query: 212 -----DSDKIDI---GIDLQDYYLSVEWDIMKVPAVRNEKFY-SCC-EEPYPDIIFNITL 261
D + ++ G+DL +Y S EWD++ + + R+ Y SCC E Y DI + L
Sbjct: 201 VTITKDDNDVEFMQQGMDLSFFYRSAEWDLLSLTSERHSVLYASCCGPEKYVDITYYFGL 260
Query: 262 RRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPT 321
RRKTLF+T NLI+PC IS L+ VFYL S K++ +++PPT
Sbjct: 261 RRKTLFFTCNLILPCFLISILTTFVFYL---SDHKITFSISILVTLTVFFLVLIDLMPPT 317
Query: 322 SLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQ 381
SL +P+ G+YL+ TMILV LS VV++ +N FRS H M PW+ VF++ LPKIL +
Sbjct: 318 SLVIPMFGRYLITTMILVALSTVVSVITVNFRFRSGSAHKMSPWIRAVFLKFLPKILLMS 377
Query: 382 RP 383
RP
Sbjct: 378 RP 379
Score = 154 (59.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 32/77 (41%), Positives = 50/77 (64%)
Query: 484 MPRPLTWR---LPYELPSKLARLASIHFCD-LLTPINFLQ-EWEDYKLKWSPEEYGGVDT 538
+PRP+ L ++ + L R+ + + +LT +L+ +W D KL W+PE+YGG+ T
Sbjct: 52 VPRPVKNSSDILTVDVGASLIRIIDVDEKNQVLTTNLWLEMKWNDAKLTWTPEKYGGLKT 111
Query: 539 LHVPSEHIWLPDIVLYN 555
LH+PS+ IW PD+VLYN
Sbjct: 112 LHIPSDFIWTPDLVLYN 128
>ZFIN|ZDB-GENE-090312-169 [details] [associations]
symbol:chrnb2a "cholinergic receptor, nicotinic,
beta 2a" species:7955 "Danio rerio" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 ZFIN:ZDB-GENE-090312-169
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087691 EMBL:CR376846 IPI:IPI00489440
ProteinModelPortal:E7F8A2 Ensembl:ENSDART00000002532 Uniprot:E7F8A2
Length = 490
Score = 839 (300.4 bits), Expect = 9.1e-84, P = 9.1e-84
Identities = 172/353 (48%), Positives = 222/353 (62%)
Query: 33 DEAKRLYDDLLS--NYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQN 90
D +RL D LL YN+LIRP N S ++T+ + + L+QLI VN + QIMTTNVW+ Q
Sbjct: 27 DAEERLVDFLLGPERYNKLIRPAVNKSQQVTIGIKVSLAQLISVNEREQIMTTNVWLTQ- 85
Query: 91 LKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTI 150
EW DY+L W P EY G+ L +PS HIWLPDIVLYNNADG YEV+
Sbjct: 86 --------------EWNDYRLVWDPNEYEGIKKLRIPSRHIWLPDIVLYNNADGVYEVSF 131
Query: 151 MTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQG 210
A++ G + W PPAIYKS C I+V FPFD Q C +KF SWTYD +DL ++
Sbjct: 132 YCNAVVSNTGDIFWLPPAIYKSACAIEVRNFPFDQQNCTLKFRSWTYDRTELDL-YLTS- 189
Query: 211 PDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTV 270
D D DY S EWDI+ +P RNE + Y D+ ++ ++RK LFYT+
Sbjct: 190 -DFASRD------DYTPSGEWDIVSLPGRRNEDL---SDPTYLDVTYDFVIKRKPLFYTI 239
Query: 271 NLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGK 330
NLIIPCV I+ L++LVFYLPSD GEK++LC ++I+PPTSL VPL+GK
Sbjct: 240 NLIIPCVLITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLAVPLIGK 299
Query: 331 YLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
YL+FTM+LVT S+V ++ VLNV+ RSP TH M WV +VF+ LP L ++RP
Sbjct: 300 YLMFTMVLVTFSIVTSVCVLNVHHRSPSTHRMPEWVKRVFLHKLPFFLLMRRP 352
Score = 163 (62.4 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 30/58 (51%), Positives = 38/58 (65%)
Query: 500 LARLASIHFCDLLTPIN--FLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
LA+L S++ + + N QEW DY+L W P EY G+ L +PS HIWLPDIVLYN
Sbjct: 64 LAQLISVNEREQIMTTNVWLTQEWNDYRLVWDPNEYEGIKKLRIPSRHIWLPDIVLYN 121
>MGI|MGI:106212 [details] [associations]
symbol:Chrnb3 "cholinergic receptor, nicotinic, beta
polypeptide 3" species:10090 "Mus musculus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005892 "acetylcholine-gated channel complex" evidence=ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0008144 "drug binding" evidence=ISO] [GO:0016020
"membrane" evidence=ISO] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0042166
"acetylcholine binding" evidence=ISO] [GO:0043005 "neuron
projection" evidence=ISO] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0051291
"protein heterooligomerization" evidence=ISO] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 MGI:MGI:106212 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0042166 HOVERGEN:HBG003756
GO:GO:0004889 HOGENOM:HOG000006756 GO:GO:0005892
GeneTree:ENSGT00620000087732 CTD:1142 eggNOG:NOG252943 KO:K04814
OrthoDB:EOG40VVPK OMA:INENVDR EMBL:AF467896 EMBL:AY574268
EMBL:AK017571 EMBL:AK030464 EMBL:BC058193 IPI:IPI00263112
IPI:IPI00309012 RefSeq:NP_081730.1 RefSeq:NP_775304.1
UniGene:Mm.110444 ProteinModelPortal:Q8BMN3 SMR:Q8BMN3
STRING:Q8BMN3 PhosphoSite:Q8BMN3 PRIDE:Q8BMN3
Ensembl:ENSMUST00000060943 Ensembl:ENSMUST00000079463 GeneID:108043
KEGG:mmu:108043 UCSC:uc009lit.2 UCSC:uc009liu.2 InParanoid:Q8BMN3
BindingDB:Q8BMN3 ChEMBL:CHEMBL1781863 ChiTaRS:CHRNB3 NextBio:359931
Bgee:Q8BMN3 Genevestigator:Q8BMN3 GermOnline:ENSMUSG00000031492
Uniprot:Q8BMN3
Length = 464
Score = 837 (299.7 bits), Expect = 1.5e-83, P = 1.5e-83
Identities = 173/346 (50%), Positives = 229/346 (66%)
Query: 42 LLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVW 101
L Y + +RPV N+SD + V GLK+SQL++V+ KNQ+MTTNVW LK
Sbjct: 42 LFQGYQKCVRPVLNSSDIIKVYFGLKISQLVDVDEKNQLMTTNVW----LK--------- 88
Query: 102 VNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHYDGK 161
QEW D KL+W+PE+YGG++++ VPSE +WLPDIVL+ NADG +E ++MTKAI+ G
Sbjct: 89 --QEWTDQKLRWNPEDYGGINSIKVPSESLWLPDIVLFENADGRFEGSLMTKAIVKSSGT 146
Query: 162 VVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSDKIDIGID 221
V W PPA YKS C +DV +FPFD Q C MKFGSWTYDG VDL IL I+ +D
Sbjct: 147 VSWTPPASYKSSCTMDVTFFPFDKQNCSMKFGSWTYDGTMVDL--IL-------INENVD 197
Query: 222 LQDYYLSVEWDIMKVPAV---RNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLIIPCVG 278
+D++ + EW+I+ + R E FYS YP + ++ LRR LFYT+ LIIPC+G
Sbjct: 198 RKDFFDNGEWEILNAKGMKGNRREGFYS-----YPFVTYSFVLRRLPLFYTLFLIIPCLG 252
Query: 279 ISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLFTMIL 338
+SFL+VLVFYLPSD GEK+SL EIIP +S +PL+G+YLLF MI
Sbjct: 253 LSFLTVLVFYLPSDEGEKLSLSTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLLFIMIF 312
Query: 339 VTLSVVVTIAVLNVNFRSPVT-HVMKPWVHKVFIEVLPKILFIQRP 383
VTLS++VT+ V+NV+ RS T H M PWV ++F+E LP+ L ++ P
Sbjct: 313 VTLSIIVTVFVINVHHRSSSTYHPMAPWVKRLFLEKLPRWLCMKDP 358
Score = 153 (58.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 28/58 (48%), Positives = 43/58 (74%)
Query: 499 KLARLASIHFCDLLTPIN-FL-QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLY 554
K+++L + + L N +L QEW D KL+W+PE+YGG++++ VPSE +WLPDIVL+
Sbjct: 67 KISQLVDVDEKNQLMTTNVWLKQEWTDQKLRWNPEDYGGINSIKVPSESLWLPDIVLF 124
>UNIPROTKB|F1PN73 [details] [associations]
symbol:CHRNB3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087732 OMA:INENVDR EMBL:AAEX03010368
Ensembl:ENSCAFT00000008790 Uniprot:F1PN73
Length = 456
Score = 836 (299.3 bits), Expect = 1.9e-83, P = 1.9e-83
Identities = 167/341 (48%), Positives = 228/341 (66%)
Query: 42 LLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVW 101
L Y + +RPV N++D + V GLK+SQL++V+ KNQ+MTTNVW LK
Sbjct: 34 LFQGYQKWVRPVLNSNDTIKVYFGLKISQLVDVDEKNQLMTTNVW----LK--------- 80
Query: 102 VNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHYDGK 161
QEW D+KL+W+P+EYGG+ ++ VPSE +WLPDIVL+ NADG +E ++MTK I+ +G
Sbjct: 81 --QEWTDHKLRWNPDEYGGIHSIKVPSESLWLPDIVLFENADGRFEGSLMTKVIVRSNGS 138
Query: 162 VVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSDKIDIGID 221
V+W PPA YKS C +DV +FPFD Q C MKFGSWTYDG VDL +L ++ +D
Sbjct: 139 VIWTPPASYKSSCTMDVTFFPFDRQNCSMKFGSWTYDGTMVDL--VL-------VNDNVD 189
Query: 222 LQDYYLSVEWDIMKVPAV---RNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLIIPCVG 278
D++ + EW+I+ + R + FYS YP I +++ LRR LFYT+ LIIPC+G
Sbjct: 190 RNDFFDNGEWEILNAKGMKGNRRDGFYS-----YPFITYSLVLRRLPLFYTLFLIIPCLG 244
Query: 279 ISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLFTMIL 338
+SFL+VLVFYLPSD GEK+SL EIIP +S +PL+G+YLLF M+
Sbjct: 245 LSFLTVLVFYLPSDEGEKLSLSTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLLFIMVF 304
Query: 339 VTLSVVVTIAVLNVNFRSPVT-HVMKPWVHKVFIEVLPKIL 378
VTLS++VT+ V+NV+ RS T H M PWV ++F++ LPK+L
Sbjct: 305 VTLSIIVTVFVINVHHRSSSTYHPMAPWVKRLFLQKLPKVL 345
Score = 154 (59.3 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 28/58 (48%), Positives = 43/58 (74%)
Query: 499 KLARLASIHFCDLLTPIN-FL-QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLY 554
K+++L + + L N +L QEW D+KL+W+P+EYGG+ ++ VPSE +WLPDIVL+
Sbjct: 59 KISQLVDVDEKNQLMTTNVWLKQEWTDHKLRWNPDEYGGIHSIKVPSESLWLPDIVLF 116
>UNIPROTKB|F1NQD3 [details] [associations]
symbol:CHRNA6 "Neuronal acetylcholine receptor subunit
alpha-6" species:9031 "Gallus gallus" [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005892 "acetylcholine-gated channel
complex" evidence=IEA] [GO:0014059 "regulation of dopamine
secretion" evidence=IEA] [GO:0051899 "membrane depolarization"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0014059 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889 GO:GO:0005892
GeneTree:ENSGT00620000087732 GO:GO:0051899 IPI:IPI00574373
OMA:DKTRGTG EMBL:AADN02066018 EMBL:AADN02066017
Ensembl:ENSGALT00000037792 Uniprot:F1NQD3
Length = 494
Score = 834 (298.6 bits), Expect = 3.1e-83, P = 3.1e-83
Identities = 148/291 (50%), Positives = 203/291 (69%)
Query: 93 NQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMT 152
NQIM TN+W+ W DYKL+W P EY G++ + VP++ IW PDIVLYNNA G+++V T
Sbjct: 77 NQIMETNLWLRHIWNDYKLRWDPREYDGIEFVRVPADKIWKPDIVLYNNAVGDFQVEGKT 136
Query: 153 KAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPD 212
KA+L YDG + W PPAI+KS C +D+ +FPFD Q C +KFGSWTYD +DL ++ G
Sbjct: 137 KALLRYDGMITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWTYDKAKIDL--LIIGSK 194
Query: 213 SDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNL 272
+D+ +++ + EW+I+ +++ Y+CCEE Y DI ++ +RR +FYT+NL
Sbjct: 195 -------VDMNEFWENSEWEIVDASGYKHDIKYNCCEEIYTDITYSFYIRRLPMFYTINL 247
Query: 273 IIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYL 332
IIPC+ ISFL+VLVFYLPSD GEKV+LC E IP TSL +PL+G+YL
Sbjct: 248 IIPCLFISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLVGEYL 307
Query: 333 LFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
LFTMI VTLS+V+T+ VLN+++R+P TH M WV VF+ +LPK+L +QRP
Sbjct: 308 LFTMIFVTLSIVITVFVLNIHYRTPTTHTMPKWVKTVFLSLLPKVLLMQRP 358
Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
Identities = 88/185 (47%), Positives = 118/185 (63%)
Query: 21 FLVFSVII-AQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQ 79
F++ S+I + +RL+ L S YN+ IRPV N SD +TV L ++QL
Sbjct: 19 FMLTSLIADTTACESEERLFHKLFSRYNQFIRPVENVSDPVTVHFELAITQL-------- 70
Query: 80 IMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLY 139
TNV + NQIM TN+W+ W DYKL+W P EY G++ + VP++ IW PDIVLY
Sbjct: 71 ---TNV----DEVNQIMETNLWLRHIWNDYKLRWDPREYDGIEFVRVPADKIWKPDIVLY 123
Query: 140 NNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDG 199
NNA G+++V TKA+L YDG + W PPAI+KS C +D+ +FPFD Q C +KFGSWTYD
Sbjct: 124 NNAVGDFQVEGKTKALLRYDGMITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWTYDK 183
Query: 200 YTVDL 204
+DL
Sbjct: 184 AKIDL 188
Score = 138 (53.6 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 521 WEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
W DYKL+W P EY G++ + VP++ IW PDIVLYN
Sbjct: 90 WNDYKLRWDPREYDGIEFVRVPADKIWKPDIVLYN 124
>ZFIN|ZDB-GENE-040108-1 [details] [associations]
symbol:chrnb3a "cholinergic receptor, nicotinic, beta
polypeptide 3a" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004889 "acetylcholine-activated cation-selective
channel activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 ZFIN:ZDB-GENE-040108-1 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 HSSP:P02711 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 eggNOG:NOG252943 KO:K04814 EMBL:BC162133
EMBL:BC162137 EMBL:AY256909 IPI:IPI00506810 RefSeq:NP_957514.1
UniGene:Dr.79601 SMR:Q7ZZP6 GeneID:794401 KEGG:dre:794401
CTD:794401 InParanoid:Q7ZZP6 OrthoDB:EOG4FJ88Z NextBio:20931840
Uniprot:Q7ZZP6
Length = 467
Score = 834 (298.6 bits), Expect = 3.1e-83, P = 3.1e-83
Identities = 163/342 (47%), Positives = 225/342 (65%)
Query: 38 LYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMT 97
L +L Y + +RPV + +D +TV+ GLK+SQL++V+ KNQ+MTTNVW+
Sbjct: 35 LLRNLFRGYQKWVRPVLHANDTITVRFGLKISQLVDVDEKNQLMTTNVWL---------- 84
Query: 98 TNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILH 157
W +EW DYKL+W+PE+YGG+ ++ VPSE IWLPDIVLY NADG +E ++MTKAI+
Sbjct: 85 ---W--EEWTDYKLRWNPEDYGGITSIRVPSETIWLPDIVLYENADGRFEGSLMTKAIVR 139
Query: 158 YDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSDKID 217
++G ++W PPA YKS C +DV +FPFD Q C MKFGSWTYDG VDL +D
Sbjct: 140 FNGTIMWTPPASYKSACTMDVTFFPFDRQNCSMKFGSWTYDGTMVDLT---------LVD 190
Query: 218 IGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLIIPCV 277
+D +D++ + EW+I+ R + PY + ++ L+R LFYT+ LIIPC+
Sbjct: 191 AYVDRKDFFDNGEWEILNATGQRGSRRDGIYSYPY--LTYSFILKRLPLFYTLFLIIPCL 248
Query: 278 GISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLFTMI 337
G+SFL+VLVFYLPSD GEK+SL EIIP +S +PL+G+YLLF MI
Sbjct: 249 GLSFLTVLVFYLPSDEGEKLSLSTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLLFIMI 308
Query: 338 LVTLSVVVTIAVLNVNFRSPVT-HVMKPWVHKVFIEVLPKIL 378
VT S++VT+ V+NV+ RS T H M PWV +F++ LP++L
Sbjct: 309 FVTFSIIVTVFVINVHHRSSATYHPMAPWVKSLFLQRLPRLL 350
Score = 162 (62.1 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 30/58 (51%), Positives = 43/58 (74%)
Query: 499 KLARLASIHFCDLLTPIN-FL-QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLY 554
K+++L + + L N +L +EW DYKL+W+PE+YGG+ ++ VPSE IWLPDIVLY
Sbjct: 64 KISQLVDVDEKNQLMTTNVWLWEEWTDYKLRWNPEDYGGITSIRVPSETIWLPDIVLY 121
>RGD|621544 [details] [associations]
symbol:Chrnb3 "cholinergic receptor, nicotinic, beta 3
(neuronal)" species:10116 "Rattus norvegicus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IC] [GO:0005892 "acetylcholine-gated channel complex"
evidence=IDA;TAS] [GO:0008144 "drug binding" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0042166 "acetylcholine binding" evidence=IDA]
[GO:0043005 "neuron projection" evidence=IDA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0051291 "protein
heterooligomerization" evidence=IDA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 RGD:621544 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0043005 GO:GO:0042166
HOVERGEN:HBG003756 GO:GO:0004889 HOGENOM:HOG000006756 GO:GO:0005892
GeneTree:ENSGT00620000087732 CTD:1142 eggNOG:NOG252943 KO:K04814
OrthoDB:EOG40VVPK OMA:INENVDR EMBL:J04636 IPI:IPI00196741
PIR:A33523 RefSeq:NP_598281.1 UniGene:Rn.9694
ProteinModelPortal:P12391 SMR:P12391 STRING:P12391
PhosphoSite:P12391 Ensembl:ENSRNOT00000016656 GeneID:171131
KEGG:rno:171131 UCSC:RGD:621544 InParanoid:P12391 BindingDB:P12391
ChEMBL:CHEMBL4568 NextBio:621898 ArrayExpress:P12391
Genevestigator:P12391 GermOnline:ENSRNOG00000012448 Uniprot:P12391
Length = 464
Score = 834 (298.6 bits), Expect = 3.1e-83, P = 3.1e-83
Identities = 173/346 (50%), Positives = 229/346 (66%)
Query: 42 LLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVW 101
L Y + +RPV N+SD + V GLK+SQL++V+ KNQ+MTTNVW LK
Sbjct: 42 LFQGYQKWVRPVLNSSDIIKVYFGLKISQLVDVDEKNQLMTTNVW----LK--------- 88
Query: 102 VNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHYDGK 161
QEW D KL+W+PEEYGG++++ VPSE +WLPDIVL+ NADG +E ++MTKAI+ G
Sbjct: 89 --QEWTDQKLRWNPEEYGGINSIKVPSESLWLPDIVLFENADGRFEGSLMTKAIVKSSGT 146
Query: 162 VVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSDKIDIGID 221
V W PPA YKS C +DV +FPFD Q C MKFGSWTYDG VDL IL I+ +D
Sbjct: 147 VSWTPPASYKSSCTMDVTFFPFDRQNCSMKFGSWTYDGTMVDL--IL-------INENVD 197
Query: 222 LQDYYLSVEWDIMKVPAV---RNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLIIPCVG 278
+D++ + EW+I+ + R E FYS YP + ++ LRR LFYT+ LIIPC+G
Sbjct: 198 RKDFFDNGEWEILNAKGMKGNRREGFYS-----YPFVTYSFVLRRLPLFYTLFLIIPCLG 252
Query: 279 ISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLFTMIL 338
+SFL+VLVFYLPSD GEK+SL EIIP +S +PL+G+YLLF MI
Sbjct: 253 LSFLTVLVFYLPSDEGEKLSLSTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLLFIMIF 312
Query: 339 VTLSVVVTIAVLNVNFRSPVT-HVMKPWVHKVFIEVLPKILFIQRP 383
VTLS++VT+ V+NV+ RS T H M PWV ++F++ LP+ L ++ P
Sbjct: 313 VTLSIIVTVFVINVHHRSSSTYHPMAPWVKRLFLQRLPRWLCMKDP 358
Score = 156 (60.0 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 29/58 (50%), Positives = 43/58 (74%)
Query: 499 KLARLASIHFCDLLTPIN-FL-QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLY 554
K+++L + + L N +L QEW D KL+W+PEEYGG++++ VPSE +WLPDIVL+
Sbjct: 67 KISQLVDVDEKNQLMTTNVWLKQEWTDQKLRWNPEEYGGINSIKVPSESLWLPDIVLF 124
>UNIPROTKB|F1MQ06 [details] [associations]
symbol:CHRNA6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051899 "membrane depolarization" evidence=IEA]
[GO:0014059 "regulation of dopamine secretion" evidence=IEA]
[GO:0005892 "acetylcholine-gated channel complex" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0014059
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GO:GO:0005892 GeneTree:ENSGT00620000087732 GO:GO:0051899
OMA:MRNQNET EMBL:DAAA02060957 IPI:IPI00704411
ProteinModelPortal:F1MQ06 Ensembl:ENSBTAT00000018679 Uniprot:F1MQ06
Length = 494
Score = 833 (298.3 bits), Expect = 3.9e-83, P = 3.9e-83
Identities = 150/291 (51%), Positives = 204/291 (70%)
Query: 93 NQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMT 152
NQIM TN+W+ W DYKL+W P EY G++TL VP+E IW PDIVLYNNA G+++V T
Sbjct: 77 NQIMETNLWLRHIWNDYKLRWDPTEYDGIETLRVPAEMIWKPDIVLYNNAVGDFQVKGKT 136
Query: 153 KAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPD 212
KA+L YDG + W PPAI+KS C +D+ +FPFD Q C +KFGSWTYD +DL ++ G
Sbjct: 137 KALLKYDGMITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWTYDKAEIDL--LIIGSK 194
Query: 213 SDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNL 272
+D+ +++ + EW+I+ +++ Y+CCEE Y DI ++ +RR +FYT+NL
Sbjct: 195 -------VDMNEFWENSEWEIVDASGYKHDIKYNCCEEIYTDITYSFYIRRLPMFYTINL 247
Query: 273 IIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYL 332
IIPC+ ISFL+VLVFYLPSD GEKV+LC E IP TSL +PL+G+YL
Sbjct: 248 IIPCLFISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLVGEYL 307
Query: 333 LFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
LFTMI VTLS+VVT+ VLN+++R+P TH M WV VF+ +LP++L ++RP
Sbjct: 308 LFTMIFVTLSIVVTVFVLNIHYRTPTTHSMPTWVKAVFLRLLPQMLMMKRP 358
Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
Identities = 84/169 (49%), Positives = 114/169 (67%)
Query: 36 KRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQI 95
+RL+ L ++YN+ IRPV N SD +TV + ++QL +V+ ++ NQI
Sbjct: 35 ERLFHKLFAHYNQFIRPVENVSDPITVYFEVAITQLADVD---EV------------NQI 79
Query: 96 MTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAI 155
M TN+W+ W DYKL+W P EY G++TL VP+E IW PDIVLYNNA G+++V TKA+
Sbjct: 80 METNLWLRHIWNDYKLRWDPTEYDGIETLRVPAEMIWKPDIVLYNNAVGDFQVKGKTKAL 139
Query: 156 LHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
L YDG + W PPAI+KS C +D+ +FPFD Q C +KFGSWTYD +DL
Sbjct: 140 LKYDGMITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWTYDKAEIDL 188
Score = 150 (57.9 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 28/58 (48%), Positives = 39/58 (67%)
Query: 500 LARLASIHFCDLLTPIN-FLQE-WEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+ +LA + + + N +L+ W DYKL+W P EY G++TL VP+E IW PDIVLYN
Sbjct: 67 ITQLADVDEVNQIMETNLWLRHIWNDYKLRWDPTEYDGIETLRVPAEMIWKPDIVLYN 124
>UNIPROTKB|P43679 [details] [associations]
symbol:CHRNB3 "Neuronal acetylcholine receptor subunit
beta-3" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 EMBL:X83739 IPI:IPI00602078 PIR:A55972
RefSeq:NP_990143.1 UniGene:Gga.335 ProteinModelPortal:P43679
SMR:P43679 GeneID:395604 KEGG:gga:395604 CTD:1142 eggNOG:NOG252943
InParanoid:P43679 KO:K04814 OrthoDB:EOG40VVPK NextBio:20815677
Uniprot:P43679
Length = 455
Score = 833 (298.3 bits), Expect = 3.9e-83, P = 3.9e-83
Identities = 169/341 (49%), Positives = 227/341 (66%)
Query: 42 LLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVW 101
L Y + +RPV N++D + V GLK+SQL++V+ KNQ+MTTNVW LK
Sbjct: 33 LFQGYQKWVRPVENSNDTIKVLFGLKISQLVDVDEKNQLMTTNVW----LK--------- 79
Query: 102 VNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHYDGK 161
QEW D+KL W+PEEYGG+ + VPSE +WLPDIVL+ NADG +E ++MTKAI+ Y+G
Sbjct: 80 --QEWMDHKLSWNPEEYGGITAIRVPSESLWLPDIVLFENADGRFEGSLMTKAIVKYNGV 137
Query: 162 VVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSDKIDIGID 221
V W PPA YKS C +++ +FPFD Q C MKFGSWTYDG VDL IL +D +D
Sbjct: 138 VQWMPPASYKSSCTMELTFFPFDRQNCSMKFGSWTYDGSMVDL--IL-------VDENVD 188
Query: 222 LQDYYLSVEWDIMKVPAVR-NEK--FYSCCEEPYPDIIFNITLRRKTLFYTVNLIIPCVG 278
+D++ + EW+I+ ++ N K YS YP + ++ LRR LFYT+ LIIPC+G
Sbjct: 189 TKDFFDNGEWEILNAKGMKGNRKDGLYS-----YPFVTYSFVLRRLPLFYTLFLIIPCLG 243
Query: 279 ISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLFTMIL 338
+SFL+VLVFYLPSD GEK+SL EIIP +S +PL+G+YLLF MI
Sbjct: 244 LSFLTVLVFYLPSDEGEKLSLSTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLLFIMIF 303
Query: 339 VTLSVVVTIAVLNVNFRSPVT-HVMKPWVHKVFIEVLPKIL 378
VTLS++VT+ V+NV+ RS T H M PWV ++F++ LP++L
Sbjct: 304 VTLSIIVTVFVINVHHRSSATYHPMAPWVKRLFLQKLPRLL 344
Score = 154 (59.3 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 29/58 (50%), Positives = 41/58 (70%)
Query: 499 KLARLASIHFCDLLTPIN-FL-QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLY 554
K+++L + + L N +L QEW D+KL W+PEEYGG+ + VPSE +WLPDIVL+
Sbjct: 58 KISQLVDVDEKNQLMTTNVWLKQEWMDHKLSWNPEEYGGITAIRVPSESLWLPDIVLF 115
>RGD|69281 [details] [associations]
symbol:Chrna6 "cholinergic receptor, nicotinic, alpha 6
(neuronal)" species:10116 "Rattus norvegicus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA;ISO] [GO:0005892 "acetylcholine-gated channel complex"
evidence=IEA;ISO;IDA] [GO:0006812 "cation transport" evidence=ISO]
[GO:0008144 "drug binding" evidence=IDA] [GO:0014059 "regulation of
dopamine secretion" evidence=IEA;ISO] [GO:0016020 "membrane"
evidence=IDA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034220
"ion transmembrane transport" evidence=ISO] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0051291 "protein
heterooligomerization" evidence=IDA] [GO:0051899 "membrane
depolarization" evidence=IEA;ISO] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 RGD:69281 GO:GO:0014059 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 eggNOG:NOG290206 GO:GO:0005892
OrthoDB:EOG45B1FG GO:GO:0051899 CTD:8973 KO:K04808 EMBL:L08227
IPI:IPI00197477 RefSeq:NP_476532.1 UniGene:Rn.9696
ProteinModelPortal:P43143 SMR:P43143 STRING:P43143 PRIDE:P43143
GeneID:81721 KEGG:rno:81721 UCSC:RGD:69281 InParanoid:P43143
BindingDB:P43143 ChEMBL:CHEMBL4747 NextBio:615368
ArrayExpress:P43143 Genevestigator:P43143
GermOnline:ENSRNOG00000012283 Uniprot:P43143
Length = 493
Score = 832 (297.9 bits), Expect = 5.0e-83, P = 5.0e-83
Identities = 149/291 (51%), Positives = 204/291 (70%)
Query: 93 NQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMT 152
NQIM TN+W+ W+DY+L W P EY G++TL VP+++IW PDIVLYNNA G+++V T
Sbjct: 77 NQIMETNLWLRHVWKDYRLCWDPTEYDGIETLRVPADNIWKPDIVLYNNAVGDFQVEGKT 136
Query: 153 KAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPD 212
KA+L YDG + W PPAI+KS C +D+ +FPFD Q C +KFGSWTYD +DL ++ G
Sbjct: 137 KALLKYDGVITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWTYDKAEIDL--LIIGSK 194
Query: 213 SDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNL 272
+D+ D++ + EW+I+ +++ Y+CCEE Y DI ++ +RR +FYT+NL
Sbjct: 195 -------VDMNDFWENSEWEIVDASGYKHDIKYNCCEEIYTDITYSFYIRRLPMFYTINL 247
Query: 273 IIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYL 332
IIPC+ ISFL+VLVFYLPSD GEKV+LC E IP TSL +PL+G+YL
Sbjct: 248 IIPCLFISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLVGEYL 307
Query: 333 LFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
LFTMI VTLS+VVT+ VLN+++R+P TH M WV +F++V P IL ++RP
Sbjct: 308 LFTMIFVTLSIVVTVFVLNIHYRTPATHTMPKWVKTMFLQVFPSILMMRRP 358
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 84/176 (47%), Positives = 117/176 (66%)
Query: 29 AQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVN 88
++G ++L+ L ++YNR IRPV N SD +TV L ++QL V+ ++
Sbjct: 28 SRGCVSEEQLFHTLFAHYNRFIRPVENVSDPVTVHFELAITQLANVD---EV-------- 76
Query: 89 QNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEV 148
NQIM TN+W+ W+DY+L W P EY G++TL VP+++IW PDIVLYNNA G+++V
Sbjct: 77 ----NQIMETNLWLRHVWKDYRLCWDPTEYDGIETLRVPADNIWKPDIVLYNNAVGDFQV 132
Query: 149 TIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
TKA+L YDG + W PPAI+KS C +D+ +FPFD Q C +KFGSWTYD +DL
Sbjct: 133 EGKTKALLKYDGVITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWTYDKAEIDL 188
Score = 145 (56.1 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 30/71 (42%), Positives = 48/71 (67%)
Query: 487 PLTWRLPYELPSKLARLASIHFCDLLTPIN-FLQE-WEDYKLKWSPEEYGGVDTLHVPSE 544
P+T + +EL + +LA++ + + N +L+ W+DY+L W P EY G++TL VP++
Sbjct: 58 PVT--VHFELA--ITQLANVDEVNQIMETNLWLRHVWKDYRLCWDPTEYDGIETLRVPAD 113
Query: 545 HIWLPDIVLYN 555
+IW PDIVLYN
Sbjct: 114 NIWKPDIVLYN 124
>UNIPROTKB|P43143 [details] [associations]
symbol:Chrna6 "Neuronal acetylcholine receptor subunit
alpha-6" species:10116 "Rattus norvegicus" [GO:0030054 "cell
junction" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 RGD:69281 GO:GO:0014059 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 eggNOG:NOG290206 GO:GO:0005892
OrthoDB:EOG45B1FG GO:GO:0051899 CTD:8973 KO:K04808 EMBL:L08227
IPI:IPI00197477 RefSeq:NP_476532.1 UniGene:Rn.9696
ProteinModelPortal:P43143 SMR:P43143 STRING:P43143 PRIDE:P43143
GeneID:81721 KEGG:rno:81721 UCSC:RGD:69281 InParanoid:P43143
BindingDB:P43143 ChEMBL:CHEMBL4747 NextBio:615368
ArrayExpress:P43143 Genevestigator:P43143
GermOnline:ENSRNOG00000012283 Uniprot:P43143
Length = 493
Score = 832 (297.9 bits), Expect = 5.0e-83, P = 5.0e-83
Identities = 149/291 (51%), Positives = 204/291 (70%)
Query: 93 NQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMT 152
NQIM TN+W+ W+DY+L W P EY G++TL VP+++IW PDIVLYNNA G+++V T
Sbjct: 77 NQIMETNLWLRHVWKDYRLCWDPTEYDGIETLRVPADNIWKPDIVLYNNAVGDFQVEGKT 136
Query: 153 KAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPD 212
KA+L YDG + W PPAI+KS C +D+ +FPFD Q C +KFGSWTYD +DL ++ G
Sbjct: 137 KALLKYDGVITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWTYDKAEIDL--LIIGSK 194
Query: 213 SDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNL 272
+D+ D++ + EW+I+ +++ Y+CCEE Y DI ++ +RR +FYT+NL
Sbjct: 195 -------VDMNDFWENSEWEIVDASGYKHDIKYNCCEEIYTDITYSFYIRRLPMFYTINL 247
Query: 273 IIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYL 332
IIPC+ ISFL+VLVFYLPSD GEKV+LC E IP TSL +PL+G+YL
Sbjct: 248 IIPCLFISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLVGEYL 307
Query: 333 LFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
LFTMI VTLS+VVT+ VLN+++R+P TH M WV +F++V P IL ++RP
Sbjct: 308 LFTMIFVTLSIVVTVFVLNIHYRTPATHTMPKWVKTMFLQVFPSILMMRRP 358
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 84/176 (47%), Positives = 117/176 (66%)
Query: 29 AQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVN 88
++G ++L+ L ++YNR IRPV N SD +TV L ++QL V+ ++
Sbjct: 28 SRGCVSEEQLFHTLFAHYNRFIRPVENVSDPVTVHFELAITQLANVD---EV-------- 76
Query: 89 QNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEV 148
NQIM TN+W+ W+DY+L W P EY G++TL VP+++IW PDIVLYNNA G+++V
Sbjct: 77 ----NQIMETNLWLRHVWKDYRLCWDPTEYDGIETLRVPADNIWKPDIVLYNNAVGDFQV 132
Query: 149 TIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
TKA+L YDG + W PPAI+KS C +D+ +FPFD Q C +KFGSWTYD +DL
Sbjct: 133 EGKTKALLKYDGVITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWTYDKAEIDL 188
Score = 145 (56.1 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 30/71 (42%), Positives = 48/71 (67%)
Query: 487 PLTWRLPYELPSKLARLASIHFCDLLTPIN-FLQE-WEDYKLKWSPEEYGGVDTLHVPSE 544
P+T + +EL + +LA++ + + N +L+ W+DY+L W P EY G++TL VP++
Sbjct: 58 PVT--VHFELA--ITQLANVDEVNQIMETNLWLRHVWKDYRLCWDPTEYDGIETLRVPAD 113
Query: 545 HIWLPDIVLYN 555
+IW PDIVLYN
Sbjct: 114 NIWKPDIVLYN 124
>UNIPROTKB|I3LN85 [details] [associations]
symbol:CHRNA6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051899 "membrane depolarization" evidence=IEA]
[GO:0014059 "regulation of dopamine secretion" evidence=IEA]
[GO:0005892 "acetylcholine-gated channel complex" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0014059
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GO:GO:0005892 GeneTree:ENSGT00620000087732 GO:GO:0051899 CTD:8973
KO:K04808 OMA:DKTRGTG EMBL:FP339586 RefSeq:XP_003359919.1
Ensembl:ENSSSCT00000025156 GeneID:100622106 KEGG:ssc:100622106
Uniprot:I3LN85
Length = 494
Score = 831 (297.6 bits), Expect = 6.4e-83, P = 6.4e-83
Identities = 149/291 (51%), Positives = 202/291 (69%)
Query: 93 NQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMT 152
NQIM TN+W+ W DYKL+W P EY G++TL VP++ IW PDIVLYNNA G+++V T
Sbjct: 77 NQIMETNLWLRHIWNDYKLRWDPMEYDGIETLRVPADKIWKPDIVLYNNAVGDFQVEGKT 136
Query: 153 KAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPD 212
KA+L YDG + W PPAI+KS C +D+ +FPFD Q C +KFGSWTYD +DL ++ G
Sbjct: 137 KALLQYDGMITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWTYDKAEIDL--LIIGSK 194
Query: 213 SDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNL 272
+D+ D++ + EW+I+ +++ Y+CCEE Y DI ++ +RR +FYT+NL
Sbjct: 195 -------VDMDDFWENSEWEIVDASGYKHDIKYNCCEEIYTDITYSFYIRRLPMFYTINL 247
Query: 273 IIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYL 332
IIPC+ ISFL+VLVFYLPSD GEKV+LC E IP TSL +PL+G+YL
Sbjct: 248 IIPCLFISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLVGEYL 307
Query: 333 LFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
LFTMI VTLS+ VT+ VLN+++R+P TH M WV +F+ +LP IL ++RP
Sbjct: 308 LFTMIFVTLSIAVTVFVLNIHYRTPTTHTMPTWVKTLFLRLLPHILMMRRP 358
Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
Identities = 91/198 (45%), Positives = 124/198 (62%)
Query: 19 LTFLVFSVII--AQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNL 76
L + VF++ G +RL+ L S+YN+ IRPV N SD +TV + ++QL +V+
Sbjct: 16 LWWCVFTLFFKGCAGCASEERLFHTLFSHYNQFIRPVENVSDPVTVHFEVAITQLADVD- 74
Query: 77 KNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDI 136
++ NQIM TN+W+ W DYKL+W P EY G++TL VP++ IW PDI
Sbjct: 75 --EV------------NQIMETNLWLRHIWNDYKLRWDPMEYDGIETLRVPADKIWKPDI 120
Query: 137 VLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWT 196
VLYNNA G+++V TKA+L YDG + W PPAI+KS C +D+ +FPFD Q C +KFGSWT
Sbjct: 121 VLYNNAVGDFQVEGKTKALLQYDGMITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWT 180
Query: 197 YDGYTVDLKHILQGPDSD 214
YD +DL I D D
Sbjct: 181 YDKAEIDLLIIGSKVDMD 198
Score = 147 (56.8 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 27/58 (46%), Positives = 39/58 (67%)
Query: 500 LARLASIHFCDLLTPIN-FLQE-WEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+ +LA + + + N +L+ W DYKL+W P EY G++TL VP++ IW PDIVLYN
Sbjct: 67 ITQLADVDEVNQIMETNLWLRHIWNDYKLRWDPMEYDGIETLRVPADKIWKPDIVLYN 124
>MGI|MGI:106213 [details] [associations]
symbol:Chrna6 "cholinergic receptor, nicotinic, alpha
polypeptide 6" species:10090 "Mus musculus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IMP] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005892
"acetylcholine-gated channel complex" evidence=ISO;IDA] [GO:0006810
"transport" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0006812 "cation transport" evidence=IMP] [GO:0008144 "drug
binding" evidence=ISO] [GO:0014059 "regulation of dopamine
secretion" evidence=IMP] [GO:0016020 "membrane" evidence=ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034220 "ion transmembrane transport"
evidence=IMP] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0051291 "protein
heterooligomerization" evidence=ISO] [GO:0051899 "membrane
depolarization" evidence=IMP] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 MGI:MGI:106213 GO:GO:0014059 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 eggNOG:NOG290206 GO:GO:0005892
GeneTree:ENSGT00620000087732 OrthoDB:EOG45B1FG GO:GO:0051899
CTD:8973 KO:K04808 OMA:DKTRGTG EMBL:AJ245706 EMBL:AK149262
EMBL:CH466580 EMBL:BC031985 IPI:IPI00605970 RefSeq:NP_067344.2
UniGene:Mm.283137 ProteinModelPortal:Q9R0W9 SMR:Q9R0W9
STRING:Q9R0W9 PhosphoSite:Q9R0W9 PRIDE:Q9R0W9
Ensembl:ENSMUST00000033882 GeneID:11440 KEGG:mmu:11440
InParanoid:Q3UEY4 BindingDB:Q9R0W9 ChEMBL:CHEMBL6183 NextBio:278740
Bgee:Q9R0W9 Genevestigator:Q9R0W9 GermOnline:ENSMUSG00000031491
Uniprot:Q9R0W9
Length = 494
Score = 831 (297.6 bits), Expect = 6.4e-83, P = 6.4e-83
Identities = 147/291 (50%), Positives = 204/291 (70%)
Query: 93 NQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMT 152
NQIM TN+W+ W+DY+L+W P EY G++TL VP+++IW PDIVLYNNA G+++V T
Sbjct: 77 NQIMETNLWLRHIWKDYRLRWDPTEYDGIETLRVPADNIWKPDIVLYNNAVGDFQVEGKT 136
Query: 153 KAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPD 212
KA+L YDG + W PPAI+KS C +D+ +FPFD Q C +KFGSWTYD +DL ++ G
Sbjct: 137 KALLKYDGVITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWTYDKAEIDL--LIIGSK 194
Query: 213 SDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNL 272
+D+ D++ + EW+I+ +++ Y+CCEE Y DI ++ +RR +FYT+NL
Sbjct: 195 -------VDMNDFWENSEWEIVDASGYKHDIKYNCCEEIYTDITYSFYIRRLPMFYTINL 247
Query: 273 IIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYL 332
IIPC+ ISFL+VLVFYLPSD GEKV+LC E IP TSL +PL+G+YL
Sbjct: 248 IIPCLFISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLVGEYL 307
Query: 333 LFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
LFTMI VTLS+VVT+ VLN+++R+P TH M WV +F++ P IL +++P
Sbjct: 308 LFTMIFVTLSIVVTVFVLNIHYRTPATHTMPKWVKTIFLQAFPSILMMRKP 358
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 84/174 (48%), Positives = 117/174 (67%)
Query: 31 GNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQN 90
G + ++L+ L ++YNR IRPV N SD +TV L ++QL V+ ++
Sbjct: 30 GCESEEQLFHRLFAHYNRFIRPVENVSDPVTVHFELAITQLANVD---EV---------- 76
Query: 91 LKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTI 150
NQIM TN+W+ W+DY+L+W P EY G++TL VP+++IW PDIVLYNNA G+++V
Sbjct: 77 --NQIMETNLWLRHIWKDYRLRWDPTEYDGIETLRVPADNIWKPDIVLYNNAVGDFQVEG 134
Query: 151 MTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
TKA+L YDG + W PPAI+KS C +D+ +FPFD Q C +KFGSWTYD +DL
Sbjct: 135 KTKALLKYDGVITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWTYDKAEIDL 188
Score = 150 (57.9 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 30/71 (42%), Positives = 49/71 (69%)
Query: 487 PLTWRLPYELPSKLARLASIHFCDLLTPIN-FLQE-WEDYKLKWSPEEYGGVDTLHVPSE 544
P+T + +EL + +LA++ + + N +L+ W+DY+L+W P EY G++TL VP++
Sbjct: 58 PVT--VHFELA--ITQLANVDEVNQIMETNLWLRHIWKDYRLRWDPTEYDGIETLRVPAD 113
Query: 545 HIWLPDIVLYN 555
+IW PDIVLYN
Sbjct: 114 NIWKPDIVLYN 124
>UNIPROTKB|P02708 [details] [associations]
symbol:CHRNA1 "Acetylcholine receptor subunit alpha"
species:9606 "Homo sapiens" [GO:0030054 "cell junction"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=TAS]
[GO:0006810 "transport" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=ISS;IMP] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0007528
"neuromuscular junction development" evidence=IMP] [GO:0031594
"neuromuscular junction" evidence=ISS;IDA] [GO:0042391 "regulation
of membrane potential" evidence=IMP] [GO:0005886 "plasma membrane"
evidence=ISS;TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0070050 "neuron homeostasis" evidence=IMP] [GO:0003009
"skeletal muscle contraction" evidence=IMP] [GO:0019228 "regulation
of action potential in neuron" evidence=IMP] [GO:0046716 "muscle
cell homeostasis" evidence=IMP] [GO:0045211 "postsynaptic membrane"
evidence=NAS] [GO:0048630 "skeletal muscle tissue growth"
evidence=IMP] [GO:0050881 "musculoskeletal movement" evidence=IMP]
[GO:0050905 "neuromuscular process" evidence=IMP] [GO:0009986 "cell
surface" evidence=IDA] [GO:0005892 "acetylcholine-gated channel
complex" evidence=ISS] [GO:0015464 "acetylcholine receptor
activity" evidence=ISS] [GO:0042166 "acetylcholine binding"
evidence=ISS] Reactome:REACT_13685 InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0009986 GO:GO:0070050
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0007528 GO:GO:0007274
GO:GO:0031594 GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 GO:GO:0005892 GO:GO:0015464 GO:GO:0019228
CTD:1134 eggNOG:NOG314424 KO:K04803 GO:GO:0046716 GO:GO:0050905
GO:GO:0003009 GO:GO:0048630 OMA:YSCCPDT EMBL:X02502 EMBL:X02503
EMBL:X02504 EMBL:X02505 EMBL:X02506 EMBL:X02507 EMBL:X02508
EMBL:Y00762 EMBL:X17104 EMBL:AK299445 EMBL:CH471058 EMBL:S77094
EMBL:X70108 IPI:IPI00022298 IPI:IPI00218234 PIR:A03168 PIR:S10148
RefSeq:NP_000070.1 RefSeq:NP_001034612.1 UniGene:Hs.434479 PDB:1Y5P
PDB:1Y5T PDB:1Y6C PDBsum:1Y5P PDBsum:1Y5T PDBsum:1Y6C
ProteinModelPortal:P02708 SMR:P02708 STRING:P02708
PhosphoSite:P02708 DMDM:113071 PRIDE:P02708 DNASU:1134
Ensembl:ENST00000261007 Ensembl:ENST00000348749 GeneID:1134
KEGG:hsa:1134 UCSC:uc002ujd.2 GeneCards:GC02M175612 HGNC:HGNC:1955
HPA:CAB010902 MIM:100690 MIM:253290 MIM:254200 MIM:601462
MIM:608930 neXtProt:NX_P02708 Orphanet:33108 Orphanet:98913
PharmGKB:PA26487 InParanoid:P02708 PhylomeDB:P02708
BindingDB:P02708 ChEMBL:CHEMBL4808 GenomeRNAi:1134 NextBio:4716
ArrayExpress:P02708 Bgee:P02708 CleanEx:HS_CHRNA1
Genevestigator:P02708 GermOnline:ENSG00000138435 Uniprot:P02708
Length = 482
Score = 830 (297.2 bits), Expect = 8.2e-83, P = 8.2e-83
Identities = 167/380 (43%), Positives = 241/380 (63%)
Query: 19 LTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKN 78
L F + S + G++ RL L +Y+ ++RPV ++ + V +GL+L QLI V+ N
Sbjct: 8 LLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINVDEVN 67
Query: 79 QIMTTNVWVNQ----NL-KNQIMTTNVWV-----NQEWEDYKLKWSPEEYGGVDTLHVPS 128
QI+TTNV + Q +L + +T V + N++W DY LKW+P++YGGV +H+PS
Sbjct: 68 QIVTTNVRLKQGDMVDLPRPSCVTLGVPLFSHLQNEQWVDYNLKWNPDDYGGVKKIHIPS 127
Query: 129 EHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTC 188
E IW PD+VLYNNADG++ + TK +L Y G + W PPAI+KS+CEI V +FPFD Q C
Sbjct: 128 EKIWRPDLVLYNNADGDFAIVKFTKVLLQYTGHITWTPPAIFKSYCEIIVTHFPFDEQNC 187
Query: 189 VMKFGSWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCC 248
MK G+WTYDG V + P+SD+ D L ++ S EW I + ++ YSCC
Sbjct: 188 SMKLGTWTYDGSVVAIN-----PESDQPD----LSNFMESGEWVIKESRGWKHSVTYSCC 238
Query: 249 EE-PYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXX 307
+ PY DI ++ ++R L++ VN+IIPC+ SFL+ LVFYLP+DSGEK++L
Sbjct: 239 PDTPYLDITYHFVMQRLPLYFIVNVIIPCLLFSFLTGLVFYLPTDSGEKMTLSISVLLSL 298
Query: 308 XXXXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVH 367
E+IP TS VPL+GKY+LFTM+ V S+++T+ V+N + RSP THVM WV
Sbjct: 299 TVFLLVIVELIPSTSSAVPLIGKYMLFTMVFVIASIIITVIVINTHHRSPSTHVMPNWVR 358
Query: 368 KVFIEVLPKILF---IQRPA 384
KVFI+ +P I+F ++RP+
Sbjct: 359 KVFIDTIPNIMFFSTMKRPS 378
Score = 156 (60.0 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 23/37 (62%), Positives = 31/37 (83%)
Query: 519 QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
++W DY LKW+P++YGGV +H+PSE IW PD+VLYN
Sbjct: 103 EQWVDYNLKWNPDDYGGVKKIHIPSEKIWRPDLVLYN 139
>RGD|69277 [details] [associations]
symbol:Chrna1 "cholinergic receptor, nicotinic, alpha 1 (muscle)"
species:10116 "Rattus norvegicus" [GO:0003009 "skeletal muscle
contraction" evidence=IEA;ISO] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=ISO;IDA] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0005892 "acetylcholine-gated
channel complex" evidence=ISO;TAS] [GO:0007274 "neuromuscular
synaptic transmission" evidence=IEA;ISO] [GO:0007528 "neuromuscular
junction development" evidence=IEA;ISO] [GO:0009986 "cell surface"
evidence=IEA;ISO] [GO:0015464 "acetylcholine receptor activity"
evidence=IEA;ISO] [GO:0019228 "regulation of action potential in
neuron" evidence=IEA;ISO] [GO:0030054 "cell junction" evidence=IEA]
[GO:0031594 "neuromuscular junction" evidence=IEA;ISO] [GO:0042166
"acetylcholine binding" evidence=IEA;ISO] [GO:0042391 "regulation of
membrane potential" evidence=ISO] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0046716 "muscle cell homeostasis"
evidence=IEA;ISO] [GO:0048630 "skeletal muscle tissue growth"
evidence=IEA;ISO] [GO:0050881 "musculoskeletal movement"
evidence=ISO] [GO:0050905 "neuromuscular process" evidence=IEA;ISO]
[GO:0070050 "neuron homeostasis" evidence=IEA;ISO]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 RGD:69277
GO:GO:0009986 GO:GO:0070050 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007528 GO:GO:0007274 GO:GO:0031594
GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889 HOGENOM:HOG000006756
GeneTree:ENSGT00630000089708 GO:GO:0005892 GO:GO:0015464
GO:GO:0019228 CTD:1134 eggNOG:NOG314424 KO:K04803 OMA:HREIVQV
OrthoDB:EOG4KSPJW GO:GO:0046716 GO:GO:0050905 GO:GO:0003009
GO:GO:0048630 EMBL:X74832 IPI:IPI00215164 PIR:S13872
RefSeq:NP_077811.1 UniGene:Rn.44633 ProteinModelPortal:P25108
SMR:P25108 STRING:P25108 PhosphoSite:P25108
Ensembl:ENSRNOT00000024706 GeneID:79557 KEGG:rno:79557
UCSC:RGD:69277 InParanoid:P25108 BindingDB:P25108 ChEMBL:CHEMBL3599
NextBio:614834 Genevestigator:P25108 GermOnline:ENSRNOG00000018286
Uniprot:P25108
Length = 457
Score = 829 (296.9 bits), Expect = 1.0e-82, P = 1.0e-82
Identities = 163/358 (45%), Positives = 230/358 (64%)
Query: 31 GNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQN 90
G++ RL L +Y+ ++RPVG++ + + V +GL+L QLI V+ NQI+TTNV
Sbjct: 20 GSEHETRLVAKLFKDYSSVVRPVGDHREIVQVTVGLQLIQLINVDEVNQIVTTNV----R 75
Query: 91 LKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTI 150
LK Q+W DY LKW+P++YGGV +H+PSE IW PD+VLYNNADG++ +
Sbjct: 76 LK-----------QQWVDYNLKWNPDDYGGVKKIHIPSEKIWRPDVVLYNNADGDFAIVK 124
Query: 151 MTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQG 210
TK +L Y G + W PPAI+KS+CEI V +FPFD Q C MK G+WTYDG V +
Sbjct: 125 FTKVLLDYTGHITWTPPAIFKSYCEIIVTHFPFDEQNCSMKLGTWTYDGSVVAIN----- 179
Query: 211 PDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEE-PYPDIIFNITLRRKTLFYT 269
P+SD+ D L ++ S EW I + ++ FYSCC PY DI ++ ++R L++
Sbjct: 180 PESDQPD----LSNFMESGEWVIKEARGWKHWVFYSCCPNTPYLDITYHFVMQRLPLYFI 235
Query: 270 VNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLG 329
VN+IIPC+ SFL+ LVFYLP+DSGEK++L E+IP TS VPL+G
Sbjct: 236 VNVIIPCLLFSFLTSLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIG 295
Query: 330 KYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILF---IQRPA 384
KY+LFTM+ V S+++T+ V+N + RSP TH+M WV KVFI+ +P I+F ++RP+
Sbjct: 296 KYMLFTMVFVIASIIITVIVINTHHRSPSTHIMPEWVRKVFIDTIPNIMFFSTMKRPS 353
Score = 164 (62.8 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 25/43 (58%), Positives = 33/43 (76%)
Query: 513 TPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
T + Q+W DY LKW+P++YGGV +H+PSE IW PD+VLYN
Sbjct: 72 TNVRLKQQWVDYNLKWNPDDYGGVKKIHIPSEKIWRPDVVLYN 114
>UNIPROTKB|Q15825 [details] [associations]
symbol:CHRNA6 "Neuronal acetylcholine receptor subunit
alpha-6" species:9606 "Homo sapiens" [GO:0030054 "cell junction"
evidence=IEA] [GO:0004889 "acetylcholine-activated cation-selective
channel activity" evidence=IEA] [GO:0005892 "acetylcholine-gated
channel complex" evidence=IEA] [GO:0014059 "regulation of dopamine
secretion" evidence=IEA] [GO:0051899 "membrane depolarization"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0006810 "transport" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0015464 "acetylcholine receptor
activity" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS]
Reactome:REACT_13685 InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 EMBL:CH471080 GO:GO:0014059 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 eggNOG:NOG290206 GO:GO:0005892 GO:GO:0015464
OrthoDB:EOG45B1FG GO:GO:0051899 CTD:8973 KO:K04808 EMBL:U62435
EMBL:Y16282 EMBL:AB079251 EMBL:AK298798 EMBL:AK313521 EMBL:AC087533
EMBL:BC014456 IPI:IPI00019948 IPI:IPI00981699 RefSeq:NP_001186208.1
RefSeq:NP_004189.1 UniGene:Hs.103128 ProteinModelPortal:Q15825
SMR:Q15825 STRING:Q15825 PhosphoSite:Q15825 DMDM:2492620
PRIDE:Q15825 DNASU:8973 Ensembl:ENST00000276410
Ensembl:ENST00000534622 GeneID:8973 KEGG:hsa:8973 UCSC:uc003xpj.3
GeneCards:GC08M042625 HGNC:HGNC:15963 MIM:606888 neXtProt:NX_Q15825
PharmGKB:PA26492 InParanoid:Q15825 OMA:DKTRGTG PhylomeDB:Q15825
BindingDB:Q15825 ChEMBL:CHEMBL2356 GenomeRNAi:8973 NextBio:33673
ArrayExpress:Q15825 Bgee:Q15825 CleanEx:HS_CHRNA6
Genevestigator:Q15825 GermOnline:ENSG00000147434 Uniprot:Q15825
Length = 494
Score = 827 (296.2 bits), Expect = 1.7e-82, P = 1.7e-82
Identities = 152/310 (49%), Positives = 212/310 (68%)
Query: 74 VNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWL 133
V + ++ T + N + NQIM TN+W+ W DYKL+W P EY G++TL VP++ IW
Sbjct: 59 VTVHFEVAITQL-ANVDEVNQIMETNLWLRHIWNDYKLRWDPMEYDGIETLRVPADKIWK 117
Query: 134 PDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFG 193
PDIVLYNNA G+++V TKA+L Y+G + W PPAI+KS C +D+ +FPFD Q C +KFG
Sbjct: 118 PDIVLYNNAVGDFQVEGKTKALLKYNGMITWTPPAIFKSSCPMDITFFPFDHQNCSLKFG 177
Query: 194 SWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYP 253
SWTYD +DL ++ G +D+ D++ + EW+I+ +++ Y+CCEE Y
Sbjct: 178 SWTYDKAEIDL--LIIGSK-------VDMNDFWENSEWEIIDASGYKHDIKYNCCEEIYT 228
Query: 254 DIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXX 313
DI ++ +RR +FYT+NLIIPC+ ISFL+VLVFYLPSD GEKV+LC
Sbjct: 229 DITYSFYIRRLPMFYTINLIIPCLFISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLV 288
Query: 314 XAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEV 373
E IP TSL VPL+G+YLLFTMI VTLS+VVT+ VLN+++R+P TH M WV VF+++
Sbjct: 289 ITETIPSTSLVVPLVGEYLLFTMIFVTLSIVVTVFVLNIHYRTPTTHTMPRWVKTVFLKL 348
Query: 374 LPKILFIQRP 383
LP++L ++ P
Sbjct: 349 LPQVLLMRWP 358
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 83/169 (49%), Positives = 113/169 (66%)
Query: 36 KRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQI 95
+RL+ L S+YN+ IRPV N SD +TV + ++QL V+ ++ NQI
Sbjct: 35 ERLFHKLFSHYNQFIRPVENVSDPVTVHFEVAITQLANVD---EV------------NQI 79
Query: 96 MTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAI 155
M TN+W+ W DYKL+W P EY G++TL VP++ IW PDIVLYNNA G+++V TKA+
Sbjct: 80 METNLWLRHIWNDYKLRWDPMEYDGIETLRVPADKIWKPDIVLYNNAVGDFQVEGKTKAL 139
Query: 156 LHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
L Y+G + W PPAI+KS C +D+ +FPFD Q C +KFGSWTYD +DL
Sbjct: 140 LKYNGMITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWTYDKAEIDL 188
Score = 148 (57.2 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 27/58 (46%), Positives = 40/58 (68%)
Query: 500 LARLASIHFCDLLTPIN-FLQE-WEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+ +LA++ + + N +L+ W DYKL+W P EY G++TL VP++ IW PDIVLYN
Sbjct: 67 ITQLANVDEVNQIMETNLWLRHIWNDYKLRWDPMEYDGIETLRVPADKIWKPDIVLYN 124
>UNIPROTKB|E2RIZ9 [details] [associations]
symbol:CHRNA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00630000089708 OMA:HREIVQV EMBL:AAEX03017779
Ensembl:ENSCAFT00000021074 Uniprot:E2RIZ9
Length = 457
Score = 827 (296.2 bits), Expect = 1.7e-82, P = 1.7e-82
Identities = 168/374 (44%), Positives = 235/374 (62%)
Query: 16 FPSLTFL-VFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEV 74
+P L L + S + G++ RL L +YN ++RPV ++ + V +GL+L QLI V
Sbjct: 4 WPLLLLLGLCSAGVVVGSEHETRLVAKLFEDYNSVVRPVEDHRQAVEVTVGLQLIQLINV 63
Query: 75 NLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLP 134
+ NQI+TTNV LK Q+W DY LKW+PE+YGGV +H+PSE IW P
Sbjct: 64 DEVNQIVTTNV----RLK-----------QQWVDYNLKWNPEDYGGVKKIHIPSEKIWRP 108
Query: 135 DIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGS 194
D+VLYNNADG++ + TK +L Y G + W PPAI+KS+CEI V +FPFD Q C MK G+
Sbjct: 109 DLVLYNNADGDFAIVKFTKVLLDYTGHITWTPPAIFKSYCEIIVTHFPFDEQNCSMKLGT 168
Query: 195 WTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEE-PYP 253
WTYDG V + P+SD+ D L ++ S EW I + ++ FY+CC PY
Sbjct: 169 WTYDGSVVAIN-----PESDQPD----LSNFMESGEWVIKESRGWKHWVFYACCPSTPYL 219
Query: 254 DIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXX 313
DI ++ ++R L++ VN+IIPC+ SFL+ LVFYLP+DSGEK++L
Sbjct: 220 DITYHFVMQRLPLYFIVNVIIPCLLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLV 279
Query: 314 XAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEV 373
E+IP TS VPL+GKY+LFTM+ V S+++T+ V+N + RSP THVM WV KVFI+
Sbjct: 280 IVELIPSTSSAVPLIGKYMLFTMVFVIASIIITVIVINTHHRSPSTHVMPDWVRKVFIDT 339
Query: 374 LPKILF---IQRPA 384
+P I+F ++RP+
Sbjct: 340 IPNIMFFSTMKRPS 353
Score = 166 (63.5 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 26/43 (60%), Positives = 33/43 (76%)
Query: 513 TPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
T + Q+W DY LKW+PE+YGGV +H+PSE IW PD+VLYN
Sbjct: 72 TNVRLKQQWVDYNLKWNPEDYGGVKKIHIPSEKIWRPDLVLYN 114
>UNIPROTKB|Q5IS76 [details] [associations]
symbol:CHRNA6 "Neuronal acetylcholine receptor subunit
alpha-6" species:9598 "Pan troglodytes" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISS] [GO:0005892 "acetylcholine-gated channel complex"
evidence=ISS] [GO:0007165 "signal transduction" evidence=ISS]
[GO:0007399 "nervous system development" evidence=ISS] [GO:0015464
"acetylcholine receptor activity" evidence=ISS] [GO:0035095
"behavioral response to nicotine" evidence=ISS] [GO:0060084
"synaptic transmission involved in micturition" evidence=ISS]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0007399
GO:GO:0014059 GO:GO:0035095 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 eggNOG:NOG290206 GO:GO:0005892 GO:GO:0015464
GeneTree:ENSGT00620000087732 GO:GO:0060084 OrthoDB:EOG45B1FG
GO:GO:0051899 CTD:8973 KO:K04808 OMA:DKTRGTG EMBL:AY665252
RefSeq:NP_001029266.1 UniGene:Ptr.6177 ProteinModelPortal:Q5IS76
SMR:Q5IS76 Ensembl:ENSPTRT00000037452 GeneID:472750 KEGG:ptr:472750
InParanoid:Q5IS76 NextBio:20849412 Uniprot:Q5IS76
Length = 494
Score = 826 (295.8 bits), Expect = 2.2e-82, P = 2.2e-82
Identities = 151/310 (48%), Positives = 212/310 (68%)
Query: 74 VNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWL 133
V + ++ T + N + NQIM TN+W+ W DYKL+W P EY G++TL +P++ IW
Sbjct: 59 VTVHFEVAITQL-ANVDEVNQIMETNLWLRHIWNDYKLRWDPMEYDGIETLRIPADKIWK 117
Query: 134 PDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFG 193
PDIVLYNNA G+++V TKA+L Y+G + W PPAI+KS C +D+ +FPFD Q C +KFG
Sbjct: 118 PDIVLYNNAVGDFQVEGKTKALLKYNGMITWTPPAIFKSSCPMDITFFPFDHQNCSLKFG 177
Query: 194 SWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYP 253
SWTYD +DL ++ G +D+ D++ + EW+I+ +++ Y+CCEE Y
Sbjct: 178 SWTYDKAEIDL--LIIGSK-------VDMNDFWENSEWEIIDASGYKHDIKYNCCEEIYT 228
Query: 254 DIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXX 313
DI ++ +RR +FYT+NLIIPC+ ISFL+VLVFYLPSD GEKV+LC
Sbjct: 229 DITYSFYIRRLPMFYTINLIIPCLFISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLV 288
Query: 314 XAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEV 373
E IP TSL VPL+G+YLLFTMI VTLS+VVT+ VLN+++R+P TH M WV VF+++
Sbjct: 289 ITETIPSTSLVVPLVGEYLLFTMIFVTLSIVVTVFVLNIHYRTPTTHTMPRWVKTVFLKL 348
Query: 374 LPKILFIQRP 383
LP++L ++ P
Sbjct: 349 LPQVLLMRWP 358
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 82/169 (48%), Positives = 113/169 (66%)
Query: 36 KRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQI 95
+RL+ L S+YN+ IRPV N SD +TV + ++QL V+ ++ NQI
Sbjct: 35 ERLFHKLFSHYNQFIRPVENVSDPVTVHFEVAITQLANVD---EV------------NQI 79
Query: 96 MTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAI 155
M TN+W+ W DYKL+W P EY G++TL +P++ IW PDIVLYNNA G+++V TKA+
Sbjct: 80 METNLWLRHIWNDYKLRWDPMEYDGIETLRIPADKIWKPDIVLYNNAVGDFQVEGKTKAL 139
Query: 156 LHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
L Y+G + W PPAI+KS C +D+ +FPFD Q C +KFGSWTYD +DL
Sbjct: 140 LKYNGMITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWTYDKAEIDL 188
Score = 147 (56.8 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 26/58 (44%), Positives = 40/58 (68%)
Query: 500 LARLASIHFCDLLTPIN-FLQE-WEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+ +LA++ + + N +L+ W DYKL+W P EY G++TL +P++ IW PDIVLYN
Sbjct: 67 ITQLANVDEVNQIMETNLWLRHIWNDYKLRWDPMEYDGIETLRIPADKIWKPDIVLYN 124
>UNIPROTKB|P19370 [details] [associations]
symbol:chrnb2 "Neuronal acetylcholine receptor subunit
beta-2" species:7957 "Carassius auratus" [GO:0001666 "response to
hypoxia" evidence=ISS] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=ISS] [GO:0005892
"acetylcholine-gated channel complex" evidence=ISS] [GO:0007165
"signal transduction" evidence=ISS] [GO:0007613 "memory"
evidence=ISS] [GO:0008542 "visual learning" evidence=ISS]
[GO:0015464 "acetylcholine receptor activity" evidence=ISS]
[GO:0035095 "behavioral response to nicotine" evidence=ISS]
[GO:0042166 "acetylcholine binding" evidence=ISS] [GO:0050877
"neurological system process" evidence=ISS] [GO:0050890 "cognition"
evidence=ISS] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0007613 GO:GO:0035095 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0001666 GO:GO:0008542
GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889 GO:GO:0005892
GO:GO:0015464 EMBL:X54052 PIR:S14703 ProteinModelPortal:P19370
SMR:P19370 Uniprot:P19370
Length = 459
Score = 825 (295.5 bits), Expect = 2.8e-82, P = 2.8e-82
Identities = 166/338 (49%), Positives = 215/338 (63%)
Query: 46 YNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQE 105
YN+LIRP N S ++T+ + + L+QLI VN + QIMTTNVW+ Q E
Sbjct: 12 YNKLIRPAVNKSQQVTIGIKVSLAQLISVNEREQIMTTNVWLTQ---------------E 56
Query: 106 WEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWN 165
W DY+L W P EY G+ L +PS+HIWLPDIVLYNNADG YEV+ A++ G + W
Sbjct: 57 WTDYRLVWDPNEYEGIKKLRIPSQHIWLPDIVLYNNADGVYEVSFYCNAVVSNTGDIFWL 116
Query: 166 PPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSDKIDIGIDLQDY 225
PPAIYKS C I+V FPFD Q C +KF SWTYD +DL +L + + DY
Sbjct: 117 PPAIYKSACAIEVRNFPFDQQNCTLKFRSWTYDRTELDL--VLTSDFASR-------DDY 167
Query: 226 YLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVL 285
S EWDI+ +P +NE + Y DI ++ ++RK LFYT+NLIIPCV I+ L++L
Sbjct: 168 TPSGEWDIVSLPGRKNE---DPNDLTYLDITYDFVIKRKPLFYTINLIIPCVLITSLAIL 224
Query: 286 VFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVV 345
VFYLPSD GEKV+LC ++I+PPTSL VPL+GKYL+FTM+LVT S+V
Sbjct: 225 VFYLPSDCGEKVTLCMSVLLALTVFLLLISKIVPPTSLAVPLIGKYLMFTMVLVTFSIVT 284
Query: 346 TIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
++ VLNV+ RSP TH M WV VF+ LP L ++RP
Sbjct: 285 SVCVLNVHHRSPSTHYMPEWVKCVFLHKLPAFLLMRRP 322
Score = 164 (62.8 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 30/58 (51%), Positives = 39/58 (67%)
Query: 500 LARLASIHFCDLLTPIN--FLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
LA+L S++ + + N QEW DY+L W P EY G+ L +PS+HIWLPDIVLYN
Sbjct: 34 LAQLISVNEREQIMTTNVWLTQEWTDYRLVWDPNEYEGIKKLRIPSQHIWLPDIVLYN 91
>UNIPROTKB|F1MF30 [details] [associations]
symbol:CHRNB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087732 CTD:1142 KO:K04814 EMBL:DAAA02060957
IPI:IPI00690153 RefSeq:XP_002698773.1 RefSeq:XP_003584227.1
ProteinModelPortal:F1MF30 Ensembl:ENSBTAT00000039752 GeneID:521702
KEGG:bta:521702 OMA:PSETIWL NextBio:20873349 Uniprot:F1MF30
Length = 466
Score = 825 (295.5 bits), Expect = 2.8e-82, P = 2.8e-82
Identities = 165/347 (47%), Positives = 226/347 (65%)
Query: 33 DEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLK 92
+E L L Y + +RPV +++D + V GLK+SQL++V+ KNQ+MTTNVW LK
Sbjct: 35 EEEDALLRHLFQGYQKWVRPVLHSNDTVKVYFGLKISQLVDVDEKNQLMTTNVW----LK 90
Query: 93 NQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMT 152
QEW D+KL+W+P+EYGG+ ++ VPSE +WLPDIVL+ NADG +E ++MT
Sbjct: 91 -----------QEWTDHKLRWNPDEYGGIHSIKVPSESLWLPDIVLFENADGRFEGSLMT 139
Query: 153 KAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPD 212
KA++ DG V W PPA YKS C +DV +FPFD Q C MKFGSWTYDG VDL +L
Sbjct: 140 KAVVRSDGTVAWTPPASYKSSCTMDVTFFPFDRQNCSMKFGSWTYDGTMVDL--VLT--- 194
Query: 213 SDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNL 272
D +D +D++ + EW+I+ + + YP I ++ LRR LFYT+ L
Sbjct: 195 ----DENVDRKDFFDNGEWEILNAKGTAGGRRHGAYW--YPFISYSFVLRRLPLFYTLFL 248
Query: 273 IIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYL 332
I+PC+G+SFL+VLVFYLPSD GEK+SL EIIP +S +PL+G+YL
Sbjct: 249 IVPCLGLSFLTVLVFYLPSDEGEKLSLSTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYL 308
Query: 333 LFTMILVTLSVVVTIAVLNVNFRSPVT-HVMKPWVHKVFIEVLPKIL 378
LF M+ VTLS++VT+ V+NV+ RS T H M PWV ++F++ LPK+L
Sbjct: 309 LFIMVFVTLSIIVTVFVINVHHRSSSTYHPMVPWVKRLFLQTLPKLL 355
Score = 154 (59.3 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 28/58 (48%), Positives = 43/58 (74%)
Query: 499 KLARLASIHFCDLLTPIN-FL-QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLY 554
K+++L + + L N +L QEW D+KL+W+P+EYGG+ ++ VPSE +WLPDIVL+
Sbjct: 69 KISQLVDVDEKNQLMTTNVWLKQEWTDHKLRWNPDEYGGIHSIKVPSESLWLPDIVLF 126
>UNIPROTKB|F1NKI5 [details] [associations]
symbol:CHRNA6 "Neuronal acetylcholine receptor subunit
alpha-6" species:9031 "Gallus gallus" [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005892 "acetylcholine-gated channel
complex" evidence=IEA] [GO:0014059 "regulation of dopamine
secretion" evidence=IEA] [GO:0051899 "membrane depolarization"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0014059 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889 GO:GO:0005892
GeneTree:ENSGT00620000087732 GO:GO:0051899 EMBL:AADN02066018
EMBL:AADN02066017 IPI:IPI00820493 Ensembl:ENSGALT00000024818
Uniprot:F1NKI5
Length = 325
Score = 822 (294.4 bits), Expect = 5.8e-82, P = 5.8e-82
Identities = 146/289 (50%), Positives = 201/289 (69%)
Query: 93 NQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMT 152
NQIM TN+W+ W DYKL+W P EY G++ + VP++ IW PDIVLYNNA G+++V T
Sbjct: 46 NQIMETNLWLRHIWNDYKLRWDPREYDGIEFVRVPADKIWKPDIVLYNNAVGDFQVEGKT 105
Query: 153 KAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPD 212
KA+L YDG + W PPAI+KS C +D+ +FPFD Q C +KFGSWTYD +DL ++ G
Sbjct: 106 KALLRYDGMITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWTYDKAKIDL--LIIGSK 163
Query: 213 SDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNL 272
+D+ +++ + EW+I+ +++ Y+CCEE Y DI ++ +RR +FYT+NL
Sbjct: 164 -------VDMNEFWENSEWEIVDASGYKHDIKYNCCEEIYTDITYSFYIRRLPMFYTINL 216
Query: 273 IIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYL 332
IIPC+ ISFL+VLVFYLPSD GEKV+LC E IP TSL +PL+G+YL
Sbjct: 217 IIPCLFISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLVGEYL 276
Query: 333 LFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQ 381
LFTMI VTLS+V+T+ VLN+++R+P TH M WV VF+ +LPK+L +Q
Sbjct: 277 LFTMIFVTLSIVITVFVLNIHYRTPTTHTMPKWVKTVFLSLLPKVLLMQ 325
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 85/172 (49%), Positives = 112/172 (65%)
Query: 33 DEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLK 92
+ +RL+ L S YN+ IRPV N SD +TV L ++QL TNV +
Sbjct: 1 ESEERLFHKLFSRYNQFIRPVENVSDPVTVHFELAITQL-----------TNV----DEV 45
Query: 93 NQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMT 152
NQIM TN+W+ W DYKL+W P EY G++ + VP++ IW PDIVLYNNA G+++V T
Sbjct: 46 NQIMETNLWLRHIWNDYKLRWDPREYDGIEFVRVPADKIWKPDIVLYNNAVGDFQVEGKT 105
Query: 153 KAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
KA+L YDG + W PPAI+KS C +D+ +FPFD Q C +KFGSWTYD +DL
Sbjct: 106 KALLRYDGMITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWTYDKAKIDL 157
Score = 138 (53.6 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 521 WEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
W DYKL+W P EY G++ + VP++ IW PDIVLYN
Sbjct: 59 WNDYKLRWDPREYDGIEFVRVPADKIWKPDIVLYN 93
>UNIPROTKB|P02709 [details] [associations]
symbol:CHRNA1 "Acetylcholine receptor subunit alpha"
species:9913 "Bos taurus" [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0070050 "neuron homeostasis" evidence=IEA]
[GO:0050905 "neuromuscular process" evidence=IEA] [GO:0048630
"skeletal muscle tissue growth" evidence=IEA] [GO:0046716 "muscle
cell homeostasis" evidence=IEA] [GO:0042166 "acetylcholine binding"
evidence=IEA] [GO:0031594 "neuromuscular junction" evidence=IEA]
[GO:0019228 "regulation of action potential in neuron"
evidence=IEA] [GO:0015464 "acetylcholine receptor activity"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IEA] [GO:0005892
"acetylcholine-gated channel complex" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0003009 "skeletal muscle contraction"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0009986
GO:GO:0070050 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007528 GO:GO:0007274 GO:GO:0031594
GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889 HOGENOM:HOG000006756
GeneTree:ENSGT00630000089708 GO:GO:0005892 GO:GO:0015464
GO:GO:0019228 EMBL:X02509 IPI:IPI00687829 PIR:A03169
RefSeq:NP_788837.1 UniGene:Bt.16021 ProteinModelPortal:P02709
SMR:P02709 PRIDE:P02709 Ensembl:ENSBTAT00000024298 GeneID:338070
KEGG:bta:338070 CTD:1134 eggNOG:NOG314424 InParanoid:P02709
KO:K04803 OMA:HREIVQV OrthoDB:EOG4KSPJW NextBio:20812520
GO:GO:0046716 GO:GO:0050905 GO:GO:0003009 GO:GO:0048630
Uniprot:P02709
Length = 457
Score = 821 (294.1 bits), Expect = 7.4e-82, P = 7.4e-82
Identities = 167/373 (44%), Positives = 234/373 (62%)
Query: 17 PSLTFL-VFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVN 75
P L L + S + G++ RL L +YN ++RPV ++ + V +GL+L QLI V+
Sbjct: 5 PLLLLLGLCSAGLVLGSEHETRLVAKLFEDYNSVVRPVEDHRQAVEVTVGLQLIQLINVD 64
Query: 76 LKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPD 135
NQI+TTNV LK Q+W DY LKW+P++YGGV +H+PSE IW PD
Sbjct: 65 EVNQIVTTNV----RLK-----------QQWVDYNLKWNPDDYGGVKKIHIPSEKIWRPD 109
Query: 136 IVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSW 195
+VLYNNADG++ + TK +L Y G + W PPAI+KS+CEI V +FPFD Q C MK G+W
Sbjct: 110 LVLYNNADGDFAIVKFTKVLLDYTGHITWTPPAIFKSYCEIIVTHFPFDEQNCSMKLGTW 169
Query: 196 TYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEE-PYPD 254
TYDG V + P+SD+ D L ++ S EW I + ++ FY+CC PY D
Sbjct: 170 TYDGSVVVIN-----PESDQPD----LSNFMESGEWVIKESRGWKHWVFYACCPSTPYLD 220
Query: 255 IIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXX 314
I ++ ++R L++ VN+IIPC+ SFL+ LVFYLP+DSGEK++L
Sbjct: 221 ITYHFVMQRLPLYFIVNVIIPCLLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVI 280
Query: 315 AEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVL 374
E+IP TS VPL+GKY+LFTM+ V S+++T+ V+N + RSP THVM WV KVFI+ +
Sbjct: 281 VELIPSTSSAVPLIGKYMLFTMVFVIASIIITVIVINTHHRSPSTHVMPEWVRKVFIDTI 340
Query: 375 PKILF---IQRPA 384
P I+F ++RP+
Sbjct: 341 PNIMFFSTMKRPS 353
Score = 163 (62.4 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 25/43 (58%), Positives = 33/43 (76%)
Query: 513 TPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
T + Q+W DY LKW+P++YGGV +H+PSE IW PD+VLYN
Sbjct: 72 TNVRLKQQWVDYNLKWNPDDYGGVKKIHIPSEKIWRPDLVLYN 114
>UNIPROTKB|I3LLF5 [details] [associations]
symbol:CHRNB3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087732 CTD:1142 KO:K04814 OMA:PSETIWL
EMBL:FP339586 RefSeq:XP_003359920.2 Ensembl:ENSSSCT00000029069
GeneID:100622201 KEGG:ssc:100622201 Uniprot:I3LLF5
Length = 458
Score = 821 (294.1 bits), Expect = 7.4e-82, P = 7.4e-82
Identities = 165/338 (48%), Positives = 224/338 (66%)
Query: 42 LLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVW 101
L +Y + +RPV +++D + V GLK+SQL++V+ KNQ+MTTNVW LK
Sbjct: 36 LFQSYQKWVRPVLHSNDTIKVYFGLKISQLVDVDEKNQLMTTNVW----LK--------- 82
Query: 102 VNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHYDGK 161
QEW D+KL+W+P+EYGG+ ++ VPSE +WLPDIVL+ NADG +E ++MTKAI+ +G
Sbjct: 83 --QEWTDHKLRWNPDEYGGIHSIKVPSESLWLPDIVLFENADGRFEGSLMTKAIVKSNGT 140
Query: 162 VVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSDKIDIGID 221
VVW PPA YKS C +DV +FPFD Q C MKFGSWTYDG VDL +L +D +D
Sbjct: 141 VVWTPPASYKSSCTMDVTFFPFDRQNCSMKFGSWTYDGTMVDL--VL-------VDENVD 191
Query: 222 LQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLIIPCVGISF 281
+D++ + EW+I+ + YP + + LRR LFYT+ LIIPC+G+SF
Sbjct: 192 RKDFFDNGEWEILNAKGRAGSRREGM--RRYPFVTYAFVLRRLPLFYTLFLIIPCLGLSF 249
Query: 282 LSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLFTMILVTL 341
L+VLVFYLPSD GEK+SL EIIP +S +PL+G+YLLF MI VTL
Sbjct: 250 LTVLVFYLPSDEGEKLSLSTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLLFIMIFVTL 309
Query: 342 SVVVTIAVLNVNFRSPVT-HVMKPWVHKVFIEVLPKIL 378
S++VT+ V+NV+ RS T H M PWV ++F++ LPK+L
Sbjct: 310 SIIVTVFVINVHHRSSSTYHPMAPWVKRLFLQKLPKLL 347
Score = 154 (59.3 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 28/58 (48%), Positives = 43/58 (74%)
Query: 499 KLARLASIHFCDLLTPIN-FL-QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLY 554
K+++L + + L N +L QEW D+KL+W+P+EYGG+ ++ VPSE +WLPDIVL+
Sbjct: 61 KISQLVDVDEKNQLMTTNVWLKQEWTDHKLRWNPDEYGGIHSIKVPSESLWLPDIVLF 118
>UNIPROTKB|Q05901 [details] [associations]
symbol:CHRNB3 "Neuronal acetylcholine receptor subunit
beta-3" species:9606 "Homo sapiens" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0042166
"acetylcholine binding" evidence=IEA] [GO:0043005 "neuron
projection" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=NAS]
[GO:0006810 "transport" evidence=TAS] [GO:0005892
"acetylcholine-gated channel complex" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] [GO:0007271 "synaptic
transmission, cholinergic" evidence=TAS] [GO:0015267 "channel
activity" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS]
Reactome:REACT_13685 InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0007165 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007271 GO:GO:0042166
HOVERGEN:HBG003756 GO:GO:0004889 HOGENOM:HOG000006756 GO:GO:0005892
CTD:1142 eggNOG:NOG252943 KO:K04814 OrthoDB:EOG40VVPK EMBL:U62438
EMBL:Y08417 EMBL:AF140765 EMBL:AF140760 EMBL:AF140761 EMBL:AF140762
EMBL:AF140763 EMBL:AF140764 EMBL:BC069681 EMBL:BC069703
EMBL:BC069788 EMBL:X67513 IPI:IPI00016662 PIR:I38056
RefSeq:NP_000740.1 UniGene:Hs.654576 ProteinModelPortal:Q05901
SMR:Q05901 STRING:Q05901 PhosphoSite:Q05901 DMDM:2506128
PaxDb:Q05901 PRIDE:Q05901 DNASU:1142 Ensembl:ENST00000289957
GeneID:1142 KEGG:hsa:1142 UCSC:uc003xpi.1 GeneCards:GC08P042552
HGNC:HGNC:1963 HPA:HPA045555 MIM:118508 neXtProt:NX_Q05901
PharmGKB:PA26495 InParanoid:Q05901 OMA:INENVDR PhylomeDB:Q05901
BindingDB:Q05901 ChEMBL:CHEMBL2586 GenomeRNAi:1142 NextBio:4752
Bgee:Q05901 CleanEx:HS_CHRNB3 Genevestigator:Q05901
GermOnline:ENSG00000147432 Uniprot:Q05901
Length = 458
Score = 821 (294.1 bits), Expect = 7.4e-82, P = 7.4e-82
Identities = 168/341 (49%), Positives = 227/341 (66%)
Query: 42 LLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVW 101
L Y + +RPV +++D + V GLK+SQL++V+ KNQ+MTTNVW LK
Sbjct: 36 LFQGYQKWVRPVLHSNDTIKVYFGLKISQLVDVDEKNQLMTTNVW----LK--------- 82
Query: 102 VNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHYDGK 161
QEW D+KL+W+P++YGG+ ++ VPSE +WLPDIVL+ NADG +E ++MTK I+ +G
Sbjct: 83 --QEWTDHKLRWNPDDYGGIHSIKVPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGT 140
Query: 162 VVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSDKIDIGID 221
VVW PPA YKS C +DV +FPFD Q C MKFGSWTYDG VDL IL I+ +D
Sbjct: 141 VVWTPPASYKSSCTMDVTFFPFDRQNCSMKFGSWTYDGTMVDL--IL-------INENVD 191
Query: 222 LQDYYLSVEWDIMKVPAV---RNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLIIPCVG 278
+D++ + EW+I+ + R + YS YP I ++ LRR LFYT+ LIIPC+G
Sbjct: 192 RKDFFDNGEWEILNAKGMKGNRRDGVYS-----YPFITYSFVLRRLPLFYTLFLIIPCLG 246
Query: 279 ISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLFTMIL 338
+SFL+VLVFYLPSD GEK+SL EIIP +S +PL+G+YLLF MI
Sbjct: 247 LSFLTVLVFYLPSDEGEKLSLSTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLLFIMIF 306
Query: 339 VTLSVVVTIAVLNVNFRSPVT-HVMKPWVHKVFIEVLPKIL 378
VTLS++VT+ V+NV+ RS T H M PWV ++F++ LPK+L
Sbjct: 307 VTLSIIVTVFVINVHHRSSSTYHPMAPWVKRLFLQKLPKLL 347
Score = 151 (58.2 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 27/58 (46%), Positives = 43/58 (74%)
Query: 499 KLARLASIHFCDLLTPIN-FL-QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLY 554
K+++L + + L N +L QEW D+KL+W+P++YGG+ ++ VPSE +WLPDIVL+
Sbjct: 61 KISQLVDVDEKNQLMTTNVWLKQEWTDHKLRWNPDDYGGIHSIKVPSESLWLPDIVLF 118
>UNIPROTKB|P49581 [details] [associations]
symbol:CHRNA6 "Neuronal acetylcholine receptor subunit
alpha-6" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 eggNOG:NOG290206 OrthoDB:EOG45B1FG EMBL:X83889
EMBL:U48860 IPI:IPI00574373 PIR:T09289 RefSeq:NP_990695.1
UniGene:Gga.340 ProteinModelPortal:P49581 SMR:P49581 PRIDE:P49581
GeneID:396321 KEGG:gga:396321 CTD:8973 InParanoid:P49581 KO:K04808
NextBio:20816369 Uniprot:P49581
Length = 494
Score = 820 (293.7 bits), Expect = 9.4e-82, P = 9.4e-82
Identities = 147/291 (50%), Positives = 202/291 (69%)
Query: 93 NQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMT 152
NQIM TN+W+ W DYKL+ P EY G++ + VP++ IW PDIVLYNNA G+++V T
Sbjct: 77 NQIMETNLWLRHIWNDYKLRRDPREYDGIEFVRVPADKIWKPDIVLYNNAVGDFQVEGKT 136
Query: 153 KAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPD 212
KA+L YDG + W PPAI+KS C +D+ +FPFD Q C +KFGSWTYD +DL ++ G
Sbjct: 137 KALLRYDGMITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWTYDKAKIDL--LIIGSK 194
Query: 213 SDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNL 272
+D+ +++ + EW+I+ +++ Y+CCEE Y DI ++ +RR +FYT+NL
Sbjct: 195 -------VDMNEFWENSEWEIVDASGYKHDIKYNCCEEIYTDITYSFYIRRLPMFYTINL 247
Query: 273 IIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYL 332
IIPC+ ISFL+VLVFYLPSD GEKV+LC E IP TSL +PL+G+YL
Sbjct: 248 IIPCLFISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLVGEYL 307
Query: 333 LFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
LFTMI VTLS+V+T+ VLN+++R+P TH M WV VF+ +LPK+L +QRP
Sbjct: 308 LFTMIFVTLSIVITVFVLNIHYRTPTTHTMPKWVKTVFLSLLPKVLLMQRP 358
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 87/185 (47%), Positives = 117/185 (63%)
Query: 21 FLVFSVII-AQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQ 79
F++ S+I + +RL+ L S YN+ IRPV N SD +TV L ++QL
Sbjct: 19 FMLTSLIADTTACESEERLFHKLFSRYNQFIRPVENVSDPVTVHFELAITQL-------- 70
Query: 80 IMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLY 139
TNV + NQIM TN+W+ W DYKL+ P EY G++ + VP++ IW PDIVLY
Sbjct: 71 ---TNV----DEVNQIMETNLWLRHIWNDYKLRRDPREYDGIEFVRVPADKIWKPDIVLY 123
Query: 140 NNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDG 199
NNA G+++V TKA+L YDG + W PPAI+KS C +D+ +FPFD Q C +KFGSWTYD
Sbjct: 124 NNAVGDFQVEGKTKALLRYDGMITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWTYDK 183
Query: 200 YTVDL 204
+DL
Sbjct: 184 AKIDL 188
Score = 124 (48.7 bits), Expect = 0.00019, P = 0.00019
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 521 WEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
W DYKL+ P EY G++ + VP++ IW PDIVLYN
Sbjct: 90 WNDYKLRRDPREYDGIEFVRVPADKIWKPDIVLYN 124
>MGI|MGI:87885 [details] [associations]
symbol:Chrna1 "cholinergic receptor, nicotinic, alpha
polypeptide 1 (muscle)" species:10090 "Mus musculus" [GO:0003009
"skeletal muscle contraction" evidence=ISO] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISO;IGI] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005892 "acetylcholine-gated channel complex" evidence=IPI]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006812 "cation transport" evidence=ISO]
[GO:0007274 "neuromuscular synaptic transmission" evidence=ISO]
[GO:0007528 "neuromuscular junction development" evidence=ISO]
[GO:0009986 "cell surface" evidence=ISO] [GO:0015464 "acetylcholine
receptor activity" evidence=IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0019228 "regulation of action potential in neuron"
evidence=ISO] [GO:0030054 "cell junction" evidence=IEA] [GO:0031594
"neuromuscular junction" evidence=ISO;IDA] [GO:0034220 "ion
transmembrane transport" evidence=ISO] [GO:0042166 "acetylcholine
binding" evidence=IGI] [GO:0042391 "regulation of membrane
potential" evidence=ISO;IGI] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0046716
"muscle cell homeostasis" evidence=ISO] [GO:0048630 "skeletal
muscle tissue growth" evidence=ISO] [GO:0050881 "musculoskeletal
movement" evidence=ISO] [GO:0050905 "neuromuscular process"
evidence=ISO] [GO:0070050 "neuron homeostasis" evidence=ISO]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 MGI:MGI:87885
GO:GO:0009986 GO:GO:0070050 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007528 GO:GO:0007274
GO:GO:0031594 GO:GO:0042391 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 GO:GO:0005892 GO:GO:0019228 CTD:1134
eggNOG:NOG314424 KO:K04803 OMA:HREIVQV OrthoDB:EOG4KSPJW
GO:GO:0046716 GO:GO:0050905 GO:GO:0003009 GO:GO:0048630 EMBL:X03986
EMBL:M17640 EMBL:AK029177 IPI:IPI00321126 PIR:A24383 PIR:I49458
RefSeq:NP_031415.2 UniGene:Mm.4583 PDB:2QC1 PDBsum:2QC1
ProteinModelPortal:P04756 SMR:P04756 DIP:DIP-59594N STRING:P04756
PhosphoSite:P04756 PRIDE:P04756 Ensembl:ENSMUST00000028515
GeneID:11435 KEGG:mmu:11435 InParanoid:P04756 BindingDB:P04756
ChEMBL:CHEMBL2449 EvolutionaryTrace:P04756 NextBio:278732
Bgee:P04756 Genevestigator:P04756 GermOnline:ENSMUSG00000027107
Uniprot:P04756
Length = 457
Score = 820 (293.7 bits), Expect = 9.4e-82, P = 9.4e-82
Identities = 162/358 (45%), Positives = 229/358 (63%)
Query: 31 GNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQN 90
G++ RL L +Y+ ++RPV ++ + + V +GL+L QLI V+ NQI+TTNV
Sbjct: 20 GSEHETRLVAKLFEDYSSVVRPVEDHREIVQVTVGLQLIQLINVDEVNQIVTTNV----R 75
Query: 91 LKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTI 150
LK Q+W DY LKW+P++YGGV +H+PSE IW PD+VLYNNADG++ +
Sbjct: 76 LK-----------QQWVDYNLKWNPDDYGGVKKIHIPSEKIWRPDVVLYNNADGDFAIVK 124
Query: 151 MTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQG 210
TK +L Y G + W PPAI+KS+CEI V +FPFD Q C MK G+WTYDG V +
Sbjct: 125 FTKVLLDYTGHITWTPPAIFKSYCEIIVTHFPFDEQNCSMKLGTWTYDGSVVAIN----- 179
Query: 211 PDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEE-PYPDIIFNITLRRKTLFYT 269
P+SD+ D L ++ S EW I + ++ FYSCC PY DI ++ ++R L++
Sbjct: 180 PESDQPD----LSNFMESGEWVIKEARGWKHWVFYSCCPTTPYLDITYHFVMQRLPLYFI 235
Query: 270 VNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLG 329
VN+IIPC+ SFL+ LVFYLP+DSGEK++L E+IP TS VPL+G
Sbjct: 236 VNVIIPCLLFSFLTSLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIG 295
Query: 330 KYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILF---IQRPA 384
KY+LFTM+ V S+++T+ V+N + RSP TH+M WV KVFI+ +P I+F ++RP+
Sbjct: 296 KYMLFTMVFVIASIIITVIVINTHHRSPSTHIMPEWVRKVFIDTIPNIMFFSTMKRPS 353
Score = 164 (62.8 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 25/43 (58%), Positives = 33/43 (76%)
Query: 513 TPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
T + Q+W DY LKW+P++YGGV +H+PSE IW PD+VLYN
Sbjct: 72 TNVRLKQQWVDYNLKWNPDDYGGVKKIHIPSEKIWRPDVVLYN 114
>UNIPROTKB|F1N4T3 [details] [associations]
symbol:CHRNA2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0015464 "acetylcholine receptor activity" evidence=IEA]
[GO:0005892 "acetylcholine-gated channel complex" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889 OMA:ACAGHVA
GO:GO:0005892 GO:GO:0015464 CTD:1135 KO:K04804
GeneTree:ENSGT00620000087732 EMBL:DAAA02023847 IPI:IPI00706536
RefSeq:NP_001179639.1 UniGene:Bt.61429 UniGene:Bt.68771
ProteinModelPortal:F1N4T3 Ensembl:ENSBTAT00000002910 GeneID:531838
KEGG:bta:531838 NextBio:20875538 Uniprot:F1N4T3
Length = 506
Score = 818 (293.0 bits), Expect = 1.5e-81, P = 1.5e-81
Identities = 157/292 (53%), Positives = 194/292 (66%)
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
KNQ+MTTNVW+ QEW DYKL+W+P ++G + +L VPSE IW+PDIVLYNNADG + VT M
Sbjct: 78 KNQMMTTNVWLKQEWSDYKLRWNPVDFGNITSLRVPSEMIWIPDIVLYNNADGEFVVTHM 137
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
TKA L G + W PPAIYKS C IDV +FPFD Q C MKFGSW+YD +DL + Q
Sbjct: 138 TKAHLFSSGLLHWAPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWSYDKAKIDLVQMEQT- 196
Query: 212 DSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVN 271
+DL+DY+ S EW I+ N K Y CC E Y D+ + +RR LFYT+N
Sbjct: 197 --------VDLKDYWESGEWAIVNATGTYNTKKYDCCAEVYADVTYYFVIRRLPLFYTIN 248
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
LIIPC+ IS L+VLVFYLPSD GEK++LC EIIP TSL +PL+ +Y
Sbjct: 249 LIIPCLLISCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLISEY 308
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
LLFTMI VTLS+V+T+ VLNV+ RS TH M WV F+ + + L I RP
Sbjct: 309 LLFTMIFVTLSIVITVFVLNVHHRSASTHNMPHWVRVAFLGCVSRWLLISRP 360
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 96/176 (54%), Positives = 117/176 (66%)
Query: 37 RLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIM 96
RL+ L YNR RPV N SD + V+ GL ++QLI+V+ KNQ+MTTNVW LK
Sbjct: 38 RLFKHLFRGYNRWARPVPNTSDVVIVRFGLSIAQLIDVDEKNQMMTTNVW----LK---- 89
Query: 97 TTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAIL 156
QEW DYKL+W+P ++G + +L VPSE IW+PDIVLYNNADG + VT MTKA L
Sbjct: 90 -------QEWSDYKLRWNPVDFGNITSLRVPSEMIWIPDIVLYNNADGEFVVTHMTKAHL 142
Query: 157 HYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPD 212
G + W PPAIYKS C IDV +FPFD Q C MKFGSW+YD +DL + Q D
Sbjct: 143 FSSGLLHWAPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWSYDKAKIDLVQMEQTVD 198
Score = 154 (59.3 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 25/45 (55%), Positives = 34/45 (75%)
Query: 511 LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+ T + QEW DYKL+W+P ++G + +L VPSE IW+PDIVLYN
Sbjct: 82 MTTNVWLKQEWSDYKLRWNPVDFGNITSLRVPSEMIWIPDIVLYN 126
>UNIPROTKB|E1BT92 [details] [associations]
symbol:CHRNA1 "Acetylcholine receptor subunit alpha"
species:9031 "Gallus gallus" [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00630000089708 EMBL:AADN02020075 EMBL:AADN02020076
EMBL:AADN02020077 IPI:IPI00604113 Ensembl:ENSGALT00000015138
ArrayExpress:E1BT92 Uniprot:E1BT92
Length = 374
Score = 817 (292.7 bits), Expect = 2.0e-81, P = 2.0e-81
Identities = 163/368 (44%), Positives = 232/368 (63%)
Query: 22 LVFSVI-IAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQI 80
L+FS A + RL DDL Y++++RPV N+ D + V +GL+L QLI V+ NQI
Sbjct: 9 LIFSAAGPALCYEHETRLVDDLFREYSKVVRPVENHRDAVVVTVGLQLIQLINVDEVNQI 68
Query: 81 MTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 140
+TTNV LK Q+W D LKW+P++YGGV + +PS+ IW PD+VLYN
Sbjct: 69 VTTNV----RLK-----------QQWTDINLKWNPDDYGGVKQIRIPSDDIWRPDLVLYN 113
Query: 141 NADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGY 200
NADG++ + TK +L + GK+ W PPAI+KS+CEI V YFPFD Q C MK G+WTYDG
Sbjct: 114 NADGDFAIVKYTKVLLEHTGKITWTPPAIFKSYCEIIVTYFPFDQQNCSMKLGTWTYDGT 173
Query: 201 TVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEE-PYPDIIFNI 259
V + P+SD+ D L ++ S EW + ++ +Y+CC + PY DI ++
Sbjct: 174 MVVIN-----PESDRPD----LSNFMESGEWVMKDYRGWKHWVYYACCPDTPYLDITYHF 224
Query: 260 TLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIP 319
++R L++ VN+IIPC+ SFL+ VFYLP+DSGEK++L E+IP
Sbjct: 225 LMQRLPLYFIVNVIIPCLLFSFLTGFVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIP 284
Query: 320 PTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILF 379
TS VPL+GKY+LFTM+ V S+++T+ V+N + RSP TH M PWV K+FI+ +P I+F
Sbjct: 285 STSSAVPLIGKYMLFTMVFVIASIIITVIVINTHHRSPSTHTMPPWVRKIFIDTIPNIMF 344
Query: 380 ---IQRPA 384
++RP+
Sbjct: 345 FSTMKRPS 352
Score = 145 (56.1 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 22/43 (51%), Positives = 31/43 (72%)
Query: 513 TPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
T + Q+W D LKW+P++YGGV + +PS+ IW PD+VLYN
Sbjct: 71 TNVRLKQQWTDINLKWNPDDYGGVKQIRIPSDDIWRPDLVLYN 113
>UNIPROTKB|P09479 [details] [associations]
symbol:CHRNA1 "Acetylcholine receptor subunit alpha"
species:9031 "Gallus gallus" [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 CTD:1134 eggNOG:NOG314424 KO:K04803
EMBL:X07330 EMBL:X07331 EMBL:X12434 EMBL:X12435 EMBL:X12436
EMBL:X07335 EMBL:AJ250359 EMBL:AF051909 EMBL:M14808 EMBL:M14809
IPI:IPI00679393 PIR:I50149 PIR:I50150 PIR:S00376 RefSeq:NP_990147.1
UniGene:Gga.4134 ProteinModelPortal:P09479 SMR:P09479 GeneID:395608
KEGG:gga:395608 InParanoid:P09479 NextBio:20815681 Uniprot:P09479
Length = 456
Score = 817 (292.7 bits), Expect = 2.0e-81, P = 2.0e-81
Identities = 163/368 (44%), Positives = 232/368 (63%)
Query: 22 LVFSVI-IAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQI 80
L+FS A + RL DDL Y++++RPV N+ D + V +GL+L QLI V+ NQI
Sbjct: 9 LIFSAAGPALCYEHETRLVDDLFREYSKVVRPVENHRDAVVVTVGLQLIQLINVDEVNQI 68
Query: 81 MTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 140
+TTNV LK Q+W D LKW+P++YGGV + +PS+ IW PD+VLYN
Sbjct: 69 VTTNV----RLK-----------QQWTDINLKWNPDDYGGVKQIRIPSDDIWRPDLVLYN 113
Query: 141 NADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGY 200
NADG++ + TK +L + GK+ W PPAI+KS+CEI V YFPFD Q C MK G+WTYDG
Sbjct: 114 NADGDFAIVKYTKVLLEHTGKITWTPPAIFKSYCEIIVTYFPFDQQNCSMKLGTWTYDGT 173
Query: 201 TVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEE-PYPDIIFNI 259
V + P+SD+ D L ++ S EW + ++ +Y+CC + PY DI ++
Sbjct: 174 MVVIN-----PESDRPD----LSNFMESGEWVMKDYRGWKHWVYYACCPDTPYLDITYHF 224
Query: 260 TLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIP 319
++R L++ VN+IIPC+ SFL+ VFYLP+DSGEK++L E+IP
Sbjct: 225 LMQRLPLYFIVNVIIPCLLFSFLTGFVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIP 284
Query: 320 PTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILF 379
TS VPL+GKY+LFTM+ V S+++T+ V+N + RSP TH M PWV K+FI+ +P I+F
Sbjct: 285 STSSAVPLIGKYMLFTMVFVIASIIITVIVINTHHRSPSTHTMPPWVRKIFIDTIPNIMF 344
Query: 380 ---IQRPA 384
++RP+
Sbjct: 345 FSTMKRPS 352
Score = 145 (56.1 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 22/43 (51%), Positives = 31/43 (72%)
Query: 513 TPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
T + Q+W D LKW+P++YGGV + +PS+ IW PD+VLYN
Sbjct: 71 TNVRLKQQWTDINLKWNPDDYGGVKQIRIPSDDIWRPDLVLYN 113
>ZFIN|ZDB-GENE-030102-4 [details] [associations]
symbol:chrnb3b "cholinergic receptor, nicotinic, beta
polypeptide 3b" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004889 "acetylcholine-activated cation-selective
channel activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 ZFIN:ZDB-GENE-030102-4 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 HSSP:P02711 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 GeneTree:ENSGT00620000087732 eggNOG:NOG252943
KO:K04814 OrthoDB:EOG40VVPK EMBL:CU459160 EMBL:BC163409
EMBL:BC163411 EMBL:AB087185 IPI:IPI00504956 RefSeq:NP_775394.1
UniGene:Dr.84843 SMR:Q8AV68 Ensembl:ENSDART00000050037
GeneID:317643 KEGG:dre:317643 CTD:317643 InParanoid:Q8AV68
OMA:HYPELAP NextBio:20807126 Uniprot:Q8AV68
Length = 462
Score = 816 (292.3 bits), Expect = 2.5e-81, P = 2.5e-81
Identities = 167/345 (48%), Positives = 222/345 (64%)
Query: 38 LYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMT 97
L DL Y R +RP+ + + + V+ GLK+SQL++V+ KNQ+MTTNVW+ +
Sbjct: 34 LLRDLFQGYQRWVRPILHANHTVKVRFGLKISQLVDVDEKNQLMTTNVWLYE-------- 85
Query: 98 TNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILH 157
EW DYKL+W+PE YGG+ + VPSE IWLPDIVLY NADG +E +IMTKAI+
Sbjct: 86 -------EWLDYKLRWNPENYGGITFIRVPSESIWLPDIVLYENADGRFEGSIMTKAIVR 138
Query: 158 YDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSDKID 217
Y+G + W PPA YKS C +DV +FPFD Q C MKFGSWTYDG V+L +L ++
Sbjct: 139 YNGLITWTPPASYKSACTMDVTFFPFDRQNCSMKFGSWTYDGNMVEL--VL-------VN 189
Query: 218 IGIDLQDYYLSVEWDIMKVPA---VRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLII 274
+D D++ + EW+I+ R + YS YP I ++ L+R LFYT+ LII
Sbjct: 190 HQVDRSDFFDNGEWEILSATGHKGSRRDGHYS-----YPYITYSFILKRLPLFYTLFLII 244
Query: 275 PCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLF 334
PC+G+SFL+VLVFYLPSD GEKVSL EIIP +S +PL+G+YLLF
Sbjct: 245 PCLGLSFLTVLVFYLPSDEGEKVSLSTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLLF 304
Query: 335 TMILVTLSVVVTIAVLNVNFRSPVT-HVMKPWVHKVFIEVLPKIL 378
MI VTLS++VT+ V+NV+ RS T H M PWV +F++ LP +L
Sbjct: 305 IMIFVTLSIIVTVFVINVHHRSSATYHPMSPWVRTLFLQRLPDLL 349
Score = 157 (60.3 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 29/58 (50%), Positives = 39/58 (67%)
Query: 499 KLARLASIHFCDLLTPIN--FLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLY 554
K+++L + + L N +EW DYKL+W+PE YGG+ + VPSE IWLPDIVLY
Sbjct: 63 KISQLVDVDEKNQLMTTNVWLYEEWLDYKLRWNPENYGGITFIRVPSESIWLPDIVLY 120
Score = 39 (18.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 323 LTVPLLGKYLLFTMILVT 340
+T+ ++G + LFT I T
Sbjct: 1 MTLTVIGLFTLFTSIFAT 18
>UNIPROTKB|F1P208 [details] [associations]
symbol:CHRNA1 "Acetylcholine receptor subunit alpha"
species:9031 "Gallus gallus" [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0003009 "skeletal muscle contraction" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005892 "acetylcholine-gated channel complex"
evidence=IEA] [GO:0007274 "neuromuscular synaptic transmission"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0015464
"acetylcholine receptor activity" evidence=IEA] [GO:0019228
"regulation of action potential in neuron" evidence=IEA]
[GO:0031594 "neuromuscular junction" evidence=IEA] [GO:0042166
"acetylcholine binding" evidence=IEA] [GO:0046716 "muscle cell
homeostasis" evidence=IEA] [GO:0048630 "skeletal muscle tissue
growth" evidence=IEA] [GO:0050905 "neuromuscular process"
evidence=IEA] [GO:0070050 "neuron homeostasis" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0009986
GO:GO:0070050 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0031594 GO:GO:0042391 GO:GO:0042166
GO:GO:0004889 GeneTree:ENSGT00630000089708 GO:GO:0005892
GO:GO:0015464 GO:GO:0046716 IPI:IPI00679393 OMA:YSCCPDT
EMBL:AADN02020075 EMBL:AADN02020076 EMBL:AADN02020077
ProteinModelPortal:F1P208 Ensembl:ENSGALT00000022743
ArrayExpress:F1P208 Uniprot:F1P208
Length = 467
Score = 816 (292.3 bits), Expect = 2.5e-81, P = 2.5e-81
Identities = 159/352 (45%), Positives = 226/352 (64%)
Query: 37 RLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIM 96
RL DDL Y++++RPV N+ D + V +GL+L QLI V+ NQI+TTNV LK
Sbjct: 36 RLVDDLFREYSKVVRPVENHRDAVVVTVGLQLIQLINVDEVNQIVTTNV----RLK---- 87
Query: 97 TTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAIL 156
Q+W D LKW+P++YGGV + +PS+ IW PD+VLYNNADG++ + TK +L
Sbjct: 88 -------QQWTDINLKWNPDDYGGVKQIRIPSDDIWRPDLVLYNNADGDFAIVKYTKVLL 140
Query: 157 HYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSDKI 216
+ GK+ W PPAI+KS+CEI V YFPFD Q C MK G+WTYDG V + P+SD+
Sbjct: 141 EHTGKITWTPPAIFKSYCEIIVTYFPFDQQNCSMKLGTWTYDGTMVVIN-----PESDRP 195
Query: 217 DIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEE-PYPDIIFNITLRRKTLFYTVNLIIP 275
D L ++ S EW + ++ +Y+CC + PY DI ++ ++R L++ VN+IIP
Sbjct: 196 D----LSNFMESGEWVMKDYRGWKHWVYYACCPDTPYLDITYHFLMQRLPLYFIVNVIIP 251
Query: 276 CVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLFT 335
C+ SFL+ VFYLP+DSGEK++L E+IP TS VPL+GKY+LFT
Sbjct: 252 CLLFSFLTGFVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLFT 311
Query: 336 MILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILF---IQRPA 384
M+ V S+++T+ V+N + RSP TH M PWV K+FI+ +P I+F ++RP+
Sbjct: 312 MVFVIASIIITVIVINTHHRSPSTHTMPPWVRKIFIDTIPNIMFFSTMKRPS 363
Score = 145 (56.1 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 22/43 (51%), Positives = 31/43 (72%)
Query: 513 TPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
T + Q+W D LKW+P++YGGV + +PS+ IW PD+VLYN
Sbjct: 82 TNVRLKQQWTDINLKWNPDDYGGVKQIRIPSDDIWRPDLVLYN 124
>UNIPROTKB|Q8SPU6 [details] [associations]
symbol:CHRNB4 "Neuronal acetylcholine receptor subunit
beta-4" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
HOVERGEN:HBG003756 GO:GO:0004889 eggNOG:NOG290206
HOGENOM:HOG000006757 OrthoDB:EOG4HQDJ4 EMBL:AF487465
IPI:IPI00690689 RefSeq:NP_776942.1 UniGene:Bt.9978
ProteinModelPortal:Q8SPU6 SMR:Q8SPU6 PRIDE:Q8SPU6 GeneID:282181
KEGG:bta:282181 CTD:1143 InParanoid:Q8SPU6 KO:K04815
ChEMBL:CHEMBL5238 NextBio:20806009 Uniprot:Q8SPU6
Length = 496
Score = 805 (288.4 bits), Expect = 3.7e-80, P = 3.7e-80
Identities = 152/316 (48%), Positives = 213/316 (67%)
Query: 69 SQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPS 128
SQLI + L Q+ + ++ N + QIMTTN+W+ QEW DY+L W+ Y GV+ L +P+
Sbjct: 51 SQLISIQL--QLSLAQL-ISVNEREQIMTTNIWLKQEWTDYRLAWNSSRYEGVNILRIPA 107
Query: 129 EHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTC 188
+WLPDIVLYNNADG+YEV++ T ++ +G V+W PPAI KS C+I+V++FPFD Q C
Sbjct: 108 NRVWLPDIVLYNNADGSYEVSLYTNVVVRSNGSVMWLPPAICKSACKIEVKHFPFDQQNC 167
Query: 189 VMKFGSWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCC 248
+KF SWTYD +D+ +L+ P + + D+ S EWDI+ +P R
Sbjct: 168 TLKFRSWTYDHTEIDM--VLKMPTAS-------MDDFTPSGEWDIVALPGRRTVN----P 214
Query: 249 EEP-YPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXX 307
++P Y D+ ++ ++RK LFYT+NLIIPCV I+ L++LVFYLPSD GEK++LC
Sbjct: 215 QDPSYVDVTYDFIIKRKPLFYTINLIIPCVLITSLAILVFYLPSDCGEKMTLCISVLLAL 274
Query: 308 XXXXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVH 367
++I+PPTSL VPL+GKYL+FTM+LVT S+V ++ VLNV+ RSP TH M PWV
Sbjct: 275 TVFLLLISKIVPPTSLNVPLIGKYLMFTMVLVTFSIVTSVCVLNVHHRSPSTHTMAPWVK 334
Query: 368 KVFIEVLPKILFIQRP 383
+ F+ LP LFI+RP
Sbjct: 335 RCFLHKLPTFLFIKRP 350
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 94/199 (47%), Positives = 126/199 (63%)
Query: 8 RTAAMHVLFPSLTFLVFSVIIAQGNDEAKRLYDDLLSN--YNRLIRPVGNNSDKLTVKMG 65
R+A VLF SL L N E K L DDLL+ YN LIRP ++S +++++
Sbjct: 2 RSALPLVLF-SLVALCGRGDCRVANAEEK-LMDDLLNKTRYNNLIRPATSSSQLISIQLQ 59
Query: 66 LKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLH 125
L L+QLI VN + QIMTTN+W LK QEW DY+L W+ Y GV+ L
Sbjct: 60 LSLAQLISVNEREQIMTTNIW----LK-----------QEWTDYRLAWNSSRYEGVNILR 104
Query: 126 VPSEHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDV 185
+P+ +WLPDIVLYNNADG+YEV++ T ++ +G V+W PPAI KS C+I+V++FPFD
Sbjct: 105 IPANRVWLPDIVLYNNADGSYEVSLYTNVVVRSNGSVMWLPPAICKSACKIEVKHFPFDQ 164
Query: 186 QTCVMKFGSWTYDGYTVDL 204
Q C +KF SWTYD +D+
Sbjct: 165 QNCTLKFRSWTYDHTEIDM 183
Score = 145 (56.1 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 28/63 (44%), Positives = 40/63 (63%)
Query: 495 ELPSKLARLASIHFCD--LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIV 552
+L LA+L S++ + + T I QEW DY+L W+ Y GV+ L +P+ +WLPDIV
Sbjct: 57 QLQLSLAQLISVNEREQIMTTNIWLKQEWTDYRLAWNSSRYEGVNILRIPANRVWLPDIV 116
Query: 553 LYN 555
LYN
Sbjct: 117 LYN 119
>UNIPROTKB|F1NAI4 [details] [associations]
symbol:CHRNA5 "Neuronal acetylcholine receptor subunit
alpha-5" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005892
"acetylcholine-gated channel complex" evidence=IEA] [GO:0015464
"acetylcholine receptor activity" evidence=IEA] [GO:0035095
"behavioral response to nicotine" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889 GO:GO:0005892
GO:GO:0015464 OMA:HISQKND GeneTree:ENSGT00620000087732
GO:GO:0035094 IPI:IPI00571201 EMBL:AADN02040457
Ensembl:ENSGALT00000004776 ArrayExpress:F1NAI4 Uniprot:F1NAI4
Length = 453
Score = 804 (288.1 bits), Expect = 4.7e-80, P = 4.7e-80
Identities = 149/293 (50%), Positives = 202/293 (68%)
Query: 87 VNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNY 146
V+ + KNQ+MTTNVW+ QEW D KL+W+PE+Y G+ ++ VPS+ IW+PDIVLY+NADG +
Sbjct: 69 VDVDEKNQLMTTNVWLKQEWIDVKLRWNPEDYAGITSIRVPSDSIWIPDIVLYDNADGRF 128
Query: 147 EVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKH 206
E T TK ++ YDG + W PPA YKS C IDV +FPFD+Q C MKFGSWTYDG VD+
Sbjct: 129 EGT-STKTVVKYDGTIAWTPPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDI-- 185
Query: 207 ILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTL 266
IL+ D DK +D++ + EW+I+ + + CC YP + ++ +RR L
Sbjct: 186 ILEDYDVDK-------RDFFDNGEWEIVTATGSKGNRTDGCCW--YPFVTYSFIIRRLPL 236
Query: 267 FYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVP 326
FYT+ LIIPC+G+SFL+VLVFYLPS+ GEK+SLC EIIP +S +P
Sbjct: 237 FYTLFLIIPCIGLSFLTVLVFYLPSNEGEKISLCTSVLVSLTVFLLVIEEIIPSSSKVIP 296
Query: 327 LLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTH-VMKPWVHKVFIEVLPKIL 378
L+G+YL+FTMI VTLS+V+T+ +N++ RS TH M PWV K+F+ LPK+L
Sbjct: 297 LIGEYLVFTMIFVTLSIVITVFAINIHHRSSSTHNAMAPWVRKIFLHKLPKLL 349
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 91/177 (51%), Positives = 121/177 (68%)
Query: 28 IAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWV 87
+A+ D RL+ L +Y R +RPV + +D + +K GL +SQL++V+ KNQ+MTTNVW
Sbjct: 28 VAKSED---RLFKHLFEDYQRWVRPVEHLNDTIKIKFGLAISQLVDVDEKNQLMTTNVW- 83
Query: 88 NQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYE 147
LK QEW D KL+W+PE+Y G+ ++ VPS+ IW+PDIVLY+NADG +E
Sbjct: 84 ---LK-----------QEWIDVKLRWNPEDYAGITSIRVPSDSIWIPDIVLYDNADGRFE 129
Query: 148 VTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
T TK ++ YDG + W PPA YKS C IDV +FPFD+Q C MKFGSWTYDG VD+
Sbjct: 130 GT-STKTVVKYDGTIAWTPPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDI 185
Score = 145 (56.1 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 23/45 (51%), Positives = 34/45 (75%)
Query: 511 LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+ T + QEW D KL+W+PE+Y G+ ++ VPS+ IW+PDIVLY+
Sbjct: 78 MTTNVWLKQEWIDVKLRWNPEDYAGITSIRVPSDSIWIPDIVLYD 122
>UNIPROTKB|F1NIT6 [details] [associations]
symbol:CHRNA5 "Neuronal acetylcholine receptor subunit
alpha-5" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005892
"acetylcholine-gated channel complex" evidence=IEA] [GO:0015464
"acetylcholine receptor activity" evidence=IEA] [GO:0035095
"behavioral response to nicotine" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889 GO:GO:0005892
GO:GO:0015464 GeneTree:ENSGT00620000087732 GO:GO:0035094
EMBL:AADN02040457 IPI:IPI00821054 Ensembl:ENSGALT00000039779
ArrayExpress:F1NIT6 Uniprot:F1NIT6
Length = 325
Score = 804 (288.1 bits), Expect = 4.7e-80, P = 4.7e-80
Identities = 149/293 (50%), Positives = 202/293 (68%)
Query: 87 VNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNY 146
V+ + KNQ+MTTNVW+ QEW D KL+W+PE+Y G+ ++ VPS+ IW+PDIVLY+NADG +
Sbjct: 42 VDVDEKNQLMTTNVWLKQEWIDVKLRWNPEDYAGITSIRVPSDSIWIPDIVLYDNADGRF 101
Query: 147 EVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKH 206
E T TK ++ YDG + W PPA YKS C IDV +FPFD+Q C MKFGSWTYDG VD+
Sbjct: 102 EGT-STKTVVKYDGTIAWTPPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDI-- 158
Query: 207 ILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTL 266
IL+ D DK +D++ + EW+I+ + + CC YP + ++ +RR L
Sbjct: 159 ILEDYDVDK-------RDFFDNGEWEIVTATGSKGNRTDGCCW--YPFVTYSFIIRRLPL 209
Query: 267 FYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVP 326
FYT+ LIIPC+G+SFL+VLVFYLPS+ GEK+SLC EIIP +S +P
Sbjct: 210 FYTLFLIIPCIGLSFLTVLVFYLPSNEGEKISLCTSVLVSLTVFLLVIEEIIPSSSKVIP 269
Query: 327 LLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTH-VMKPWVHKVFIEVLPKIL 378
L+G+YL+FTMI VTLS+V+T+ +N++ RS TH M PWV K+F+ LPK+L
Sbjct: 270 LIGEYLVFTMIFVTLSIVITVFAINIHHRSSSTHNAMAPWVRKIFLHKLPKLL 322
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 91/177 (51%), Positives = 121/177 (68%)
Query: 28 IAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWV 87
+A+ D RL+ L +Y R +RPV + +D + +K GL +SQL++V+ KNQ+MTTNVW
Sbjct: 1 VAKSED---RLFKHLFEDYQRWVRPVEHLNDTIKIKFGLAISQLVDVDEKNQLMTTNVW- 56
Query: 88 NQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYE 147
LK QEW D KL+W+PE+Y G+ ++ VPS+ IW+PDIVLY+NADG +E
Sbjct: 57 ---LK-----------QEWIDVKLRWNPEDYAGITSIRVPSDSIWIPDIVLYDNADGRFE 102
Query: 148 VTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
T TK ++ YDG + W PPA YKS C IDV +FPFD+Q C MKFGSWTYDG VD+
Sbjct: 103 GT-STKTVVKYDGTIAWTPPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDI 158
Score = 145 (56.1 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 23/45 (51%), Positives = 34/45 (75%)
Query: 511 LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+ T + QEW D KL+W+PE+Y G+ ++ VPS+ IW+PDIVLY+
Sbjct: 51 MTTNVWLKQEWIDVKLRWNPEDYAGITSIRVPSDSIWIPDIVLYD 95
>UNIPROTKB|F1NIT9 [details] [associations]
symbol:CHRNA5 "Neuronal acetylcholine receptor subunit
alpha-5" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005892
"acetylcholine-gated channel complex" evidence=IEA] [GO:0015464
"acetylcholine receptor activity" evidence=IEA] [GO:0035095
"behavioral response to nicotine" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889 GO:GO:0005892
GO:GO:0015464 GeneTree:ENSGT00620000087732 GO:GO:0035094
EMBL:AADN02040457 IPI:IPI00822298 Ensembl:ENSGALT00000039776
ArrayExpress:F1NIT9 Uniprot:F1NIT9
Length = 320
Score = 804 (288.1 bits), Expect = 4.7e-80, P = 4.7e-80
Identities = 149/293 (50%), Positives = 202/293 (68%)
Query: 87 VNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNY 146
V+ + KNQ+MTTNVW+ QEW D KL+W+PE+Y G+ ++ VPS+ IW+PDIVLY+NADG +
Sbjct: 38 VDVDEKNQLMTTNVWLKQEWIDVKLRWNPEDYAGITSIRVPSDSIWIPDIVLYDNADGRF 97
Query: 147 EVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKH 206
E T TK ++ YDG + W PPA YKS C IDV +FPFD+Q C MKFGSWTYDG VD+
Sbjct: 98 EGT-STKTVVKYDGTIAWTPPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDI-- 154
Query: 207 ILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTL 266
IL+ D DK +D++ + EW+I+ + + CC YP + ++ +RR L
Sbjct: 155 ILEDYDVDK-------RDFFDNGEWEIVTATGSKGNRTDGCCW--YPFVTYSFIIRRLPL 205
Query: 267 FYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVP 326
FYT+ LIIPC+G+SFL+VLVFYLPS+ GEK+SLC EIIP +S +P
Sbjct: 206 FYTLFLIIPCIGLSFLTVLVFYLPSNEGEKISLCTSVLVSLTVFLLVIEEIIPSSSKVIP 265
Query: 327 LLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTH-VMKPWVHKVFIEVLPKIL 378
L+G+YL+FTMI VTLS+V+T+ +N++ RS TH M PWV K+F+ LPK+L
Sbjct: 266 LIGEYLVFTMIFVTLSIVITVFAINIHHRSSSTHNAMAPWVRKIFLHKLPKLL 318
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 89/168 (52%), Positives = 117/168 (69%)
Query: 37 RLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIM 96
RL+ L +Y R +RPV + +D + +K GL +SQL++V+ KNQ+MTTNVW LK
Sbjct: 3 RLFKHLFEDYQRWVRPVEHLNDTIKIKFGLAISQLVDVDEKNQLMTTNVW----LK---- 54
Query: 97 TTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAIL 156
QEW D KL+W+PE+Y G+ ++ VPS+ IW+PDIVLY+NADG +E T TK ++
Sbjct: 55 -------QEWIDVKLRWNPEDYAGITSIRVPSDSIWIPDIVLYDNADGRFEGT-STKTVV 106
Query: 157 HYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
YDG + W PPA YKS C IDV +FPFD+Q C MKFGSWTYDG VD+
Sbjct: 107 KYDGTIAWTPPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDI 154
Score = 145 (56.1 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 23/45 (51%), Positives = 34/45 (75%)
Query: 511 LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+ T + QEW D KL+W+PE+Y G+ ++ VPS+ IW+PDIVLY+
Sbjct: 47 MTTNVWLKQEWIDVKLRWNPEDYAGITSIRVPSDSIWIPDIVLYD 91
>UNIPROTKB|F1NIT7 [details] [associations]
symbol:CHRNA5 "Neuronal acetylcholine receptor subunit
alpha-5" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005892
"acetylcholine-gated channel complex" evidence=IEA] [GO:0015464
"acetylcholine receptor activity" evidence=IEA] [GO:0035095
"behavioral response to nicotine" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889 GO:GO:0005892
GO:GO:0015464 GeneTree:ENSGT00620000087732 GO:GO:0035094
EMBL:AADN02040457 IPI:IPI00820377 Ensembl:ENSGALT00000039778
ArrayExpress:F1NIT7 Uniprot:F1NIT7
Length = 310
Score = 804 (288.1 bits), Expect = 4.7e-80, P = 4.7e-80
Identities = 149/293 (50%), Positives = 202/293 (68%)
Query: 87 VNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNY 146
V+ + KNQ+MTTNVW+ QEW D KL+W+PE+Y G+ ++ VPS+ IW+PDIVLY+NADG +
Sbjct: 27 VDVDEKNQLMTTNVWLKQEWIDVKLRWNPEDYAGITSIRVPSDSIWIPDIVLYDNADGRF 86
Query: 147 EVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKH 206
E T TK ++ YDG + W PPA YKS C IDV +FPFD+Q C MKFGSWTYDG VD+
Sbjct: 87 EGT-STKTVVKYDGTIAWTPPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDI-- 143
Query: 207 ILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTL 266
IL+ D DK +D++ + EW+I+ + + CC YP + ++ +RR L
Sbjct: 144 ILEDYDVDK-------RDFFDNGEWEIVTATGSKGNRTDGCCW--YPFVTYSFIIRRLPL 194
Query: 267 FYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVP 326
FYT+ LIIPC+G+SFL+VLVFYLPS+ GEK+SLC EIIP +S +P
Sbjct: 195 FYTLFLIIPCIGLSFLTVLVFYLPSNEGEKISLCTSVLVSLTVFLLVIEEIIPSSSKVIP 254
Query: 327 LLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTH-VMKPWVHKVFIEVLPKIL 378
L+G+YL+FTMI VTLS+V+T+ +N++ RS TH M PWV K+F+ LPK+L
Sbjct: 255 LIGEYLVFTMIFVTLSIVITVFAINIHHRSSSTHNAMAPWVRKIFLHKLPKLL 307
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 86/159 (54%), Positives = 112/159 (70%)
Query: 46 YNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQE 105
Y R +RPV + +D + +K GL +SQL++V+ KNQ+MTTNVW LK QE
Sbjct: 1 YQRWVRPVEHLNDTIKIKFGLAISQLVDVDEKNQLMTTNVW----LK-----------QE 45
Query: 106 WEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWN 165
W D KL+W+PE+Y G+ ++ VPS+ IW+PDIVLY+NADG +E T TK ++ YDG + W
Sbjct: 46 WIDVKLRWNPEDYAGITSIRVPSDSIWIPDIVLYDNADGRFEGT-STKTVVKYDGTIAWT 104
Query: 166 PPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
PPA YKS C IDV +FPFD+Q C MKFGSWTYDG VD+
Sbjct: 105 PPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDI 143
Score = 145 (56.1 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 23/45 (51%), Positives = 34/45 (75%)
Query: 511 LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+ T + QEW D KL+W+PE+Y G+ ++ VPS+ IW+PDIVLY+
Sbjct: 36 MTTNVWLKQEWIDVKLRWNPEDYAGITSIRVPSDSIWIPDIVLYD 80
>UNIPROTKB|F8WFN5 [details] [associations]
symbol:Chrnb3 "Neuronal acetylcholine receptor subunit
beta-3" species:10116 "Rattus norvegicus" [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PROSITE:PS00236 RGD:621544
GO:GO:0016021 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 IPI:IPI00475542 Ensembl:ENSRNOT00000016764
Uniprot:F8WFN5
Length = 449
Score = 733 (263.1 bits), Expect = 9.5e-80, Sum P(2) = 9.5e-80
Identities = 146/286 (51%), Positives = 194/286 (67%)
Query: 102 VNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHYDGK 161
V+ EW D KL+W+PEEYGG++++ VPSE +WLPDIVL+ NADG +E ++MTKAI+ G
Sbjct: 72 VDVEWTDQKLRWNPEEYGGINSIKVPSESLWLPDIVLFENADGRFEGSLMTKAIVKSSGT 131
Query: 162 VVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSDKIDIGID 221
V W PPA YKS C +DV +FPFD Q C MKFGSWTYDG VDL IL I+ +D
Sbjct: 132 VSWTPPASYKSSCTMDVTFFPFDRQNCSMKFGSWTYDGTMVDL--IL-------INENVD 182
Query: 222 LQDYYLSVEWDIMKVPAV---RNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLIIPCVG 278
+D++ + EW+I+ + R E FYS YP + ++ LRR LFYT+ LIIPC+G
Sbjct: 183 RKDFFDNGEWEILNAKGMKGNRREGFYS-----YPFVTYSFVLRRLPLFYTLFLIIPCLG 237
Query: 279 ISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLFTMIL 338
+SFL+VLVFYLPSD GEK+SL EIIP +S +PL+G+YLLF MI
Sbjct: 238 LSFLTVLVFYLPSDEGEKLSLSTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLLFIMIF 297
Query: 339 VTLSVVVTIAVLNVNFRSPVT-HVMKPWVHKVFIEVLPKILFIQRP 383
VTLS++VT+ V+NV+ RS T H M PWV ++F++ LP+ L ++ P
Sbjct: 298 VTLSIIVTVFVINVHHRSSSTYHPMAPWVKRLFLQRLPRWLCMKDP 343
Score = 149 (57.5 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 23/35 (65%), Positives = 31/35 (88%)
Query: 520 EWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLY 554
EW D KL+W+PEEYGG++++ VPSE +WLPDIVL+
Sbjct: 75 EWTDQKLRWNPEEYGGINSIKVPSESLWLPDIVLF 109
Score = 87 (35.7 bits), Expect = 9.5e-80, Sum P(2) = 9.5e-80
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 42 LLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTN 84
L Y + +RPV N+SD + V GLK+SQL++V +Q + N
Sbjct: 42 LFQGYQKWVRPVLNSSDIIKVYFGLKISQLVDVEWTDQKLRWN 84
>UNIPROTKB|F1RKU9 [details] [associations]
symbol:CHRNA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035095 "behavioral response to nicotine" evidence=IEA]
[GO:0015464 "acetylcholine receptor activity" evidence=IEA]
[GO:0005892 "acetylcholine-gated channel complex" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0035095 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889 GO:GO:0005892
GO:GO:0015464 GeneTree:ENSGT00620000087732 OMA:WANILIP
EMBL:CT967296 Ensembl:ENSSSCT00000001957 Uniprot:F1RKU9
Length = 496
Score = 801 (287.0 bits), Expect = 9.7e-80, P = 9.7e-80
Identities = 149/296 (50%), Positives = 202/296 (68%)
Query: 87 VNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNY 146
V+ + KNQ+MTTNVW+ QEW D KLKW+P++YGG+ + VPS+ +W PDIVL++NADG +
Sbjct: 42 VDVDEKNQLMTTNVWLKQEWIDVKLKWNPDDYGGIKVIRVPSDSLWTPDIVLFDNADGRF 101
Query: 147 EVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKH 206
E TK ++ YDG V W PPA YKS C IDV +FPFD+Q C MKFGSWTYDG VD+
Sbjct: 102 EGA-STKTVVRYDGTVTWMPPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDI-- 158
Query: 207 ILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTL 266
IL+ D DK +D++ + EW+I+ + + SCC PY I ++ ++R L
Sbjct: 159 ILEDQDVDK-------RDFFDNGEWEIVSATGSKGNRTDSCCWYPY--ITYSFVIKRLPL 209
Query: 267 FYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVP 326
FYT+ LIIPC+G+SFL+VLVFYLPS+ GEK+ LC EIIP +S +P
Sbjct: 210 FYTLFLIIPCIGLSFLTVLVFYLPSNEGEKICLCTSVLVSLTVFLLVIEEIIPSSSKVIP 269
Query: 327 LLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTH-VMKPWVHKVFIEVLPKILFIQ 381
L+G+YL+FTMI VTLS++VT+ +N++ RS TH M PWV K+F+ LPK+L +Q
Sbjct: 270 LIGEYLVFTMIFVTLSIMVTVFAINIHHRSSATHNAMAPWVRKIFLHKLPKLLCMQ 325
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 89/167 (53%), Positives = 116/167 (69%)
Query: 38 LYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMT 97
L+ DL +Y R +RPV + +DK+ +K GL +SQL++V+ KNQ+MTTNVW LK
Sbjct: 8 LFKDLFQDYERWVRPVEHLNDKIKIKFGLAISQLVDVDEKNQLMTTNVW----LK----- 58
Query: 98 TNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILH 157
QEW D KLKW+P++YGG+ + VPS+ +W PDIVL++NADG +E TK ++
Sbjct: 59 ------QEWIDVKLKWNPDDYGGIKVIRVPSDSLWTPDIVLFDNADGRFEGA-STKTVVR 111
Query: 158 YDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
YDG V W PPA YKS C IDV +FPFD+Q C MKFGSWTYDG VD+
Sbjct: 112 YDGTVTWMPPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDI 158
Score = 141 (54.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 22/45 (48%), Positives = 33/45 (73%)
Query: 511 LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+ T + QEW D KLKW+P++YGG+ + VPS+ +W PDIVL++
Sbjct: 51 MTTNVWLKQEWIDVKLKWNPDDYGGIKVIRVPSDSLWTPDIVLFD 95
>UNIPROTKB|F1MC93 [details] [associations]
symbol:CHRNB4 "Neuronal acetylcholine receptor subunit
beta-4" species:9913 "Bos taurus" [GO:0060084 "synaptic
transmission involved in micturition" evidence=IEA] [GO:0035095
"behavioral response to nicotine" evidence=IEA] [GO:0015464
"acetylcholine receptor activity" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0006940 "regulation of
smooth muscle contraction" evidence=IEA] [GO:0006939 "smooth muscle
contraction" evidence=IEA] [GO:0001508 "regulation of action
potential" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0004889 "acetylcholine-activated cation-selective
channel activity" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0035095 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007626 GO:GO:0004889 GO:GO:0015464
GO:GO:0001508 GO:GO:0060084 GO:GO:0006940 GO:GO:0006939
GeneTree:ENSGT00620000087691 IPI:IPI00690689 OMA:TPTASMD
EMBL:DAAA02052434 Ensembl:ENSBTAT00000052576 Uniprot:F1MC93
Length = 495
Score = 800 (286.7 bits), Expect = 1.2e-79, P = 1.2e-79
Identities = 151/316 (47%), Positives = 212/316 (67%)
Query: 69 SQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPS 128
SQLI + L Q+ + ++ N + QIMTTN+W+ QEW DY+L W+ Y GV+ L +P+
Sbjct: 51 SQLISIQL--QLSLAQL-ISVNEREQIMTTNIWLKQEWTDYRLAWNSSRYEGVNILRIPA 107
Query: 129 EHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTC 188
+WLPDIVLYNNADG YEV++ T ++ +G V+W PPAI KS C+I+V++FPFD Q C
Sbjct: 108 NRVWLPDIVLYNNADGTYEVSLYTNVVVRSNGSVMWLPPAICKSACKIEVKHFPFDQQNC 167
Query: 189 VMKFGSWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCC 248
+KF SWTYD +D+ +L+ P + + D+ S EWDI+ +P R
Sbjct: 168 SLKFRSWTYDHTEIDM--VLKMPSAS-------MDDFTPSGEWDIVALPGRRTVN----P 214
Query: 249 EEP-YPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXX 307
++P Y D+ ++ ++RK LFYT+NLIIPCV I+ L++LVFYLPSD GEK++LC
Sbjct: 215 QDPSYVDVTYDFIIKRKPLFYTINLIIPCVLITSLAILVFYLPSDCGEKMTLCISVLLAL 274
Query: 308 XXXXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVH 367
++I+PPTSL VPL+GKYL+FTM+LVT S+V ++ VLNV+ RSP TH M PWV
Sbjct: 275 TVFLLLISKIVPPTSLNVPLIGKYLMFTMVLVTFSIVTSVCVLNVHHRSPSTHTMAPWVK 334
Query: 368 KVFIEVLPKILFIQRP 383
+ F+ LP LF++RP
Sbjct: 335 RCFLHKLPTFLFMKRP 350
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 94/199 (47%), Positives = 125/199 (62%)
Query: 8 RTAAMHVLFPSLTFLVFSVIIAQGNDEAKRLYDDLLSN--YNRLIRPVGNNSDKLTVKMG 65
R+A VLF SL L N E K L DDLL+ YN LIRP ++S +++++
Sbjct: 2 RSALPLVLF-SLVALCGRGDCRVANAEEK-LMDDLLNKTRYNNLIRPATSSSQLISIQLQ 59
Query: 66 LKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLH 125
L L+QLI VN + QIMTTN+W LK QEW DY+L W+ Y GV+ L
Sbjct: 60 LSLAQLISVNEREQIMTTNIW----LK-----------QEWTDYRLAWNSSRYEGVNILR 104
Query: 126 VPSEHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDV 185
+P+ +WLPDIVLYNNADG YEV++ T ++ +G V+W PPAI KS C+I+V++FPFD
Sbjct: 105 IPANRVWLPDIVLYNNADGTYEVSLYTNVVVRSNGSVMWLPPAICKSACKIEVKHFPFDQ 164
Query: 186 QTCVMKFGSWTYDGYTVDL 204
Q C +KF SWTYD +D+
Sbjct: 165 QNCSLKFRSWTYDHTEIDM 183
Score = 145 (56.1 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 28/63 (44%), Positives = 40/63 (63%)
Query: 495 ELPSKLARLASIHFCD--LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIV 552
+L LA+L S++ + + T I QEW DY+L W+ Y GV+ L +P+ +WLPDIV
Sbjct: 57 QLQLSLAQLISVNEREQIMTTNIWLKQEWTDYRLAWNSSRYEGVNILRIPANRVWLPDIV 116
Query: 553 LYN 555
LYN
Sbjct: 117 LYN 119
>UNIPROTKB|F1P722 [details] [associations]
symbol:CHRNA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087732 OMA:WANILIP EMBL:AAEX03008991
Ensembl:ENSCAFT00000002736 Uniprot:F1P722
Length = 490
Score = 797 (285.6 bits), Expect = 2.6e-79, P = 2.6e-79
Identities = 150/299 (50%), Positives = 202/299 (67%)
Query: 87 VNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNY 146
V+ + KNQ+MTTNVW+ QEW D KL+W P +YGG+ + VPS+ +W PDIVL++NADG +
Sbjct: 38 VDVDEKNQLMTTNVWLKQEWTDVKLRWRPGDYGGIKVIRVPSDSLWTPDIVLFDNADGRF 97
Query: 147 EVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKH 206
E T TKA++ YDG V W PPA YKS C IDV +FPFDVQ C MKFGSWTYDG VD+
Sbjct: 98 EGT-STKAVVRYDGTVTWTPPANYKSSCTIDVTFFPFDVQNCSMKFGSWTYDGSQVDI-- 154
Query: 207 ILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTL 266
IL+ D DK +D++ + EW+I+ R + S C PY + ++ ++R L
Sbjct: 155 ILEDQDVDK-------RDFFDNGEWEIVSATGSRGNRTDSACWYPY--VTYSFVIKRLPL 205
Query: 267 FYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVP 326
FYT+ LIIPC+G+SFL+VLVFYLPS+ GEK+ LC EIIP +S +P
Sbjct: 206 FYTLFLIIPCIGLSFLTVLVFYLPSNEGEKICLCTSVLVSLTVFLLVIEEIIPSSSKVIP 265
Query: 327 LLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTH-VMKPWVHKVFIEVLPKILFIQRPA 384
L+G+YL+FTMI VTLS++VT+ +N++ RS TH M PWV K+F+ LPK+L ++ A
Sbjct: 266 LIGEYLVFTMIFVTLSIMVTVFAINIHHRSSSTHDAMAPWVRKIFLHKLPKVLCMRSHA 324
Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 92/167 (55%), Positives = 116/167 (69%)
Query: 38 LYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMT 97
L+ DL +Y R +RPV + +DK+ +K GL LSQL++V+ KNQ+MTTNVW LK
Sbjct: 4 LFKDLFQDYERWVRPVEHLNDKIKIKFGLALSQLVDVDEKNQLMTTNVW----LK----- 54
Query: 98 TNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILH 157
QEW D KL+W P +YGG+ + VPS+ +W PDIVL++NADG +E T TKA++
Sbjct: 55 ------QEWTDVKLRWRPGDYGGIKVIRVPSDSLWTPDIVLFDNADGRFEGT-STKAVVR 107
Query: 158 YDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
YDG V W PPA YKS C IDV +FPFDVQ C MKFGSWTYDG VD+
Sbjct: 108 YDGTVTWTPPANYKSSCTIDVTFFPFDVQNCSMKFGSWTYDGSQVDI 154
Score = 134 (52.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 21/45 (46%), Positives = 31/45 (68%)
Query: 511 LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+ T + QEW D KL+W P +YGG+ + VPS+ +W PDIVL++
Sbjct: 47 MTTNVWLKQEWTDVKLRWRPGDYGGIKVIRVPSDSLWTPDIVLFD 91
>MGI|MGI:87892 [details] [associations]
symbol:Chrnb4 "cholinergic receptor, nicotinic, beta
polypeptide 4" species:10090 "Mus musculus" [GO:0001508 "regulation
of action potential" evidence=IGI] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0005892 "acetylcholine-gated channel complex" evidence=ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006939 "smooth muscle contraction" evidence=IGI]
[GO:0006940 "regulation of smooth muscle contraction" evidence=IMP]
[GO:0007165 "signal transduction" evidence=ISO] [GO:0007626
"locomotory behavior" evidence=IMP] [GO:0008144 "drug binding"
evidence=ISO] [GO:0015464 "acetylcholine receptor activity"
evidence=ISO] [GO:0016020 "membrane" evidence=ISO] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0035094 "response to nicotine" evidence=IGI]
[GO:0035095 "behavioral response to nicotine" evidence=IMP]
[GO:0042166 "acetylcholine binding" evidence=ISO] [GO:0042391
"regulation of membrane potential" evidence=IGI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0051291 "protein heterooligomerization" evidence=ISO]
[GO:0060084 "synaptic transmission involved in micturition"
evidence=ISO;IGI;IMP] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 MGI:MGI:87892 GO:GO:0005886 GO:GO:0035095
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007626
GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889 eggNOG:NOG290206
GO:GO:0005892 GO:GO:0015464 GO:GO:0001508 GO:GO:0060084
GO:GO:0006940 HOGENOM:HOG000006757 OrthoDB:EOG4HQDJ4 GO:GO:0006939
GeneTree:ENSGT00620000087691 CTD:1143 KO:K04815 OMA:TPTASMD
EMBL:AF492840 EMBL:AY574269 EMBL:AF325351 IPI:IPI00321844
RefSeq:NP_683746.1 UniGene:Mm.32694 ProteinModelPortal:Q8R493
SMR:Q8R493 STRING:Q8R493 PhosphoSite:Q8R493 PRIDE:Q8R493
DNASU:108015 Ensembl:ENSMUST00000034854 GeneID:108015
KEGG:mmu:108015 InParanoid:Q8R493 BindingDB:Q8R493
ChEMBL:CHEMBL1255157 NextBio:359889 Bgee:Q8R493
Genevestigator:Q8R493 GermOnline:ENSMUSG00000035200 Uniprot:Q8R493
Length = 495
Score = 796 (285.3 bits), Expect = 3.3e-79, P = 3.3e-79
Identities = 150/316 (47%), Positives = 213/316 (67%)
Query: 69 SQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPS 128
SQLI + L+ ++ + ++ N + QIMTT++W+ QEW DY+L W+ Y GV+ L +P+
Sbjct: 50 SQLISIRLE---LSLSQLISVNEREQIMTTSIWLKQEWTDYRLAWNSSCYEGVNILRIPA 106
Query: 129 EHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTC 188
+ +WLPDIVLYNNADG YEV++ T I+ +G + W PPAIYKS C+I+V++FPFD Q C
Sbjct: 107 KRVWLPDIVLYNNADGTYEVSVYTNVIVRSNGSIQWLPPAIYKSACKIEVKHFPFDQQNC 166
Query: 189 VMKFGSWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCC 248
+KF SWTYD +D+ +L+ P + + D+ S EWDI+ +P R
Sbjct: 167 TLKFRSWTYDHTEIDM--VLKSPTAI-------MDDFTPSGEWDIVALPGRRTVN----P 213
Query: 249 EEP-YPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXX 307
++P Y D+ ++ ++RK LFYT+NLIIPCV I+ L++LVFYLPSD GEK++LC
Sbjct: 214 QDPSYVDVTYDFIIKRKPLFYTINLIIPCVLITSLAILVFYLPSDCGEKMTLCISVLLAL 273
Query: 308 XXXXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVH 367
++I+PPTSL +PL+GKYLLFTM+LVT S+V T+ VLNV+ RSP TH M WV
Sbjct: 274 TFFLLLISKIVPPTSLDIPLIGKYLLFTMVLVTFSIVTTVCVLNVHHRSPSTHTMASWVK 333
Query: 368 KVFIEVLPKILFIQRP 383
+ F+ LP LF++RP
Sbjct: 334 ECFLHKLPTFLFMKRP 349
Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 87/175 (49%), Positives = 117/175 (66%)
Query: 32 NDEAKRLYDDLLSN--YNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQ 89
N E K L DDLL+ YN LIRP ++S +++++ L LSQLI VN + QIMTT++W
Sbjct: 24 NAEEK-LMDDLLNKTRYNNLIRPATSSSQLISIRLELSLSQLISVNEREQIMTTSIW--- 79
Query: 90 NLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVT 149
LK QEW DY+L W+ Y GV+ L +P++ +WLPDIVLYNNADG YEV+
Sbjct: 80 -LK-----------QEWTDYRLAWNSSCYEGVNILRIPAKRVWLPDIVLYNNADGTYEVS 127
Query: 150 IMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
+ T I+ +G + W PPAIYKS C+I+V++FPFD Q C +KF SWTYD +D+
Sbjct: 128 VYTNVIVRSNGSIQWLPPAIYKSACKIEVKHFPFDQQNCTLKFRSWTYDHTEIDM 182
Score = 138 (53.6 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 27/62 (43%), Positives = 40/62 (64%)
Query: 496 LPSKLARLASIHFCD--LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVL 553
L L++L S++ + + T I QEW DY+L W+ Y GV+ L +P++ +WLPDIVL
Sbjct: 57 LELSLSQLISVNEREQIMTTSIWLKQEWTDYRLAWNSSCYEGVNILRIPAKRVWLPDIVL 116
Query: 554 YN 555
YN
Sbjct: 117 YN 118
>RGD|2351 [details] [associations]
symbol:Chrnb4 "cholinergic receptor, nicotinic, beta 4 (neuronal)"
species:10116 "Rattus norvegicus" [GO:0001508 "regulation of action
potential" evidence=IEA;ISO] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA;IC] [GO:0005886
"plasma membrane" evidence=IEA;IDA] [GO:0005892 "acetylcholine-gated
channel complex" evidence=ISO;IDA;TAS] [GO:0006939 "smooth muscle
contraction" evidence=IEA;ISO] [GO:0006940 "regulation of smooth
muscle contraction" evidence=IEA;ISO] [GO:0007165 "signal
transduction" evidence=ISO] [GO:0007626 "locomotory behavior"
evidence=IEA;ISO] [GO:0008144 "drug binding" evidence=IDA]
[GO:0015464 "acetylcholine receptor activity" evidence=IEA;ISO]
[GO:0016020 "membrane" evidence=IDA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0035094 "response to nicotine" evidence=ISO] [GO:0035095
"behavioral response to nicotine" evidence=IEA;ISO] [GO:0042166
"acetylcholine binding" evidence=IDA] [GO:0042391 "regulation of
membrane potential" evidence=ISO] [GO:0043005 "neuron projection"
evidence=IDA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0051291 "protein heterooligomerization" evidence=IDA] [GO:0060084
"synaptic transmission involved in micturition" evidence=IEA;ISO]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 RGD:2351 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0043005 GO:GO:0042166
HOVERGEN:HBG003756 GO:GO:0004889 eggNOG:NOG290206 GO:GO:0005892
PDB:1OLJ PDBsum:1OLJ HOGENOM:HOG000006757
GeneTree:ENSGT00620000087691 CTD:1143 KO:K04815 EMBL:U42976
EMBL:M33953 EMBL:J05232 EMBL:M89971 EMBL:M33951 EMBL:M89989
EMBL:M33952 EMBL:X15834 EMBL:AY574260 IPI:IPI00196743 IPI:IPI00231372
PIR:A30992 PIR:B35721 RefSeq:NP_434693.1 UniGene:Rn.9695
ProteinModelPortal:P12392 SMR:P12392 STRING:P12392 PhosphoSite:P12392
Ensembl:ENSRNOT00000019458 GeneID:25103 KEGG:rno:25103 UCSC:RGD:2351
BindingDB:P12392 ChEMBL:CHEMBL2658 NextBio:605427 ArrayExpress:P12392
Genevestigator:P12392 GermOnline:ENSRNOG00000014427 Uniprot:P12392
Length = 495
Score = 796 (285.3 bits), Expect = 3.3e-79, P = 3.3e-79
Identities = 150/316 (47%), Positives = 213/316 (67%)
Query: 69 SQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPS 128
SQLI + L+ ++ + ++ N + QIMTT++W+ QEW DY+L W+ Y GV+ L +P+
Sbjct: 50 SQLISIRLE---LSLSQLISVNEREQIMTTSIWLKQEWTDYRLAWNSSCYEGVNILRIPA 106
Query: 129 EHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTC 188
+ +WLPDIVLYNNADG YEV++ T I+ +G + W PPAIYKS C+I+V++FPFD Q C
Sbjct: 107 KRVWLPDIVLYNNADGTYEVSVYTNVIVRSNGSIQWLPPAIYKSACKIEVKHFPFDQQNC 166
Query: 189 VMKFGSWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCC 248
+KF SWTYD +D+ +L+ P + + D+ S EWDI+ +P R
Sbjct: 167 TLKFRSWTYDHTEIDM--VLKSPTAI-------MDDFTPSGEWDIVALPGRRTVN----P 213
Query: 249 EEP-YPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXX 307
++P Y D+ ++ ++RK LFYT+NLIIPCV I+ L++LVFYLPSD GEK++LC
Sbjct: 214 QDPSYVDVTYDFIIKRKPLFYTINLIIPCVLITSLAILVFYLPSDCGEKMTLCISVLLAL 273
Query: 308 XXXXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVH 367
++I+PPTSL +PL+GKYLLFTM+LVT S+V T+ VLNV+ RSP TH M WV
Sbjct: 274 TFFLLLISKIVPPTSLDIPLIGKYLLFTMVLVTFSIVTTVCVLNVHHRSPSTHTMASWVK 333
Query: 368 KVFIEVLPKILFIQRP 383
+ F+ LP LF++RP
Sbjct: 334 ECFLHKLPTFLFMKRP 349
Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 87/175 (49%), Positives = 117/175 (66%)
Query: 32 NDEAKRLYDDLLSN--YNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQ 89
N E K L DDLL+ YN LIRP ++S +++++ L LSQLI VN + QIMTT++W
Sbjct: 24 NAEEK-LMDDLLNKTRYNNLIRPATSSSQLISIRLELSLSQLISVNEREQIMTTSIW--- 79
Query: 90 NLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVT 149
LK QEW DY+L W+ Y GV+ L +P++ +WLPDIVLYNNADG YEV+
Sbjct: 80 -LK-----------QEWTDYRLAWNSSCYEGVNILRIPAKRVWLPDIVLYNNADGTYEVS 127
Query: 150 IMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
+ T I+ +G + W PPAIYKS C+I+V++FPFD Q C +KF SWTYD +D+
Sbjct: 128 VYTNVIVRSNGSIQWLPPAIYKSACKIEVKHFPFDQQNCTLKFRSWTYDHTEIDM 182
Score = 138 (53.6 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 27/62 (43%), Positives = 40/62 (64%)
Query: 496 LPSKLARLASIHFCD--LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVL 553
L L++L S++ + + T I QEW DY+L W+ Y GV+ L +P++ +WLPDIVL
Sbjct: 57 LELSLSQLISVNEREQIMTTSIWLKQEWTDYRLAWNSSCYEGVNILRIPAKRVWLPDIVL 116
Query: 554 YN 555
YN
Sbjct: 117 YN 118
>UNIPROTKB|P12392 [details] [associations]
symbol:Chrnb4 "Neuronal acetylcholine receptor subunit
beta-4" species:10116 "Rattus norvegicus" [GO:0030054 "cell
junction" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 RGD:2351 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0043005 GO:GO:0042166
HOVERGEN:HBG003756 GO:GO:0004889 eggNOG:NOG290206 GO:GO:0005892
PDB:1OLJ PDBsum:1OLJ HOGENOM:HOG000006757
GeneTree:ENSGT00620000087691 CTD:1143 KO:K04815 EMBL:U42976
EMBL:M33953 EMBL:J05232 EMBL:M89971 EMBL:M33951 EMBL:M89989
EMBL:M33952 EMBL:X15834 EMBL:AY574260 IPI:IPI00196743
IPI:IPI00231372 PIR:A30992 PIR:B35721 RefSeq:NP_434693.1
UniGene:Rn.9695 ProteinModelPortal:P12392 SMR:P12392 STRING:P12392
PhosphoSite:P12392 Ensembl:ENSRNOT00000019458 GeneID:25103
KEGG:rno:25103 UCSC:RGD:2351 BindingDB:P12392 ChEMBL:CHEMBL2658
NextBio:605427 ArrayExpress:P12392 Genevestigator:P12392
GermOnline:ENSRNOG00000014427 Uniprot:P12392
Length = 495
Score = 796 (285.3 bits), Expect = 3.3e-79, P = 3.3e-79
Identities = 150/316 (47%), Positives = 213/316 (67%)
Query: 69 SQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPS 128
SQLI + L+ ++ + ++ N + QIMTT++W+ QEW DY+L W+ Y GV+ L +P+
Sbjct: 50 SQLISIRLE---LSLSQLISVNEREQIMTTSIWLKQEWTDYRLAWNSSCYEGVNILRIPA 106
Query: 129 EHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTC 188
+ +WLPDIVLYNNADG YEV++ T I+ +G + W PPAIYKS C+I+V++FPFD Q C
Sbjct: 107 KRVWLPDIVLYNNADGTYEVSVYTNVIVRSNGSIQWLPPAIYKSACKIEVKHFPFDQQNC 166
Query: 189 VMKFGSWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCC 248
+KF SWTYD +D+ +L+ P + + D+ S EWDI+ +P R
Sbjct: 167 TLKFRSWTYDHTEIDM--VLKSPTAI-------MDDFTPSGEWDIVALPGRRTVN----P 213
Query: 249 EEP-YPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXX 307
++P Y D+ ++ ++RK LFYT+NLIIPCV I+ L++LVFYLPSD GEK++LC
Sbjct: 214 QDPSYVDVTYDFIIKRKPLFYTINLIIPCVLITSLAILVFYLPSDCGEKMTLCISVLLAL 273
Query: 308 XXXXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVH 367
++I+PPTSL +PL+GKYLLFTM+LVT S+V T+ VLNV+ RSP TH M WV
Sbjct: 274 TFFLLLISKIVPPTSLDIPLIGKYLLFTMVLVTFSIVTTVCVLNVHHRSPSTHTMASWVK 333
Query: 368 KVFIEVLPKILFIQRP 383
+ F+ LP LF++RP
Sbjct: 334 ECFLHKLPTFLFMKRP 349
Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 87/175 (49%), Positives = 117/175 (66%)
Query: 32 NDEAKRLYDDLLSN--YNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQ 89
N E K L DDLL+ YN LIRP ++S +++++ L LSQLI VN + QIMTT++W
Sbjct: 24 NAEEK-LMDDLLNKTRYNNLIRPATSSSQLISIRLELSLSQLISVNEREQIMTTSIW--- 79
Query: 90 NLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVT 149
LK QEW DY+L W+ Y GV+ L +P++ +WLPDIVLYNNADG YEV+
Sbjct: 80 -LK-----------QEWTDYRLAWNSSCYEGVNILRIPAKRVWLPDIVLYNNADGTYEVS 127
Query: 150 IMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
+ T I+ +G + W PPAIYKS C+I+V++FPFD Q C +KF SWTYD +D+
Sbjct: 128 VYTNVIVRSNGSIQWLPPAIYKSACKIEVKHFPFDQQNCTLKFRSWTYDHTEIDM 182
Score = 138 (53.6 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 27/62 (43%), Positives = 40/62 (64%)
Query: 496 LPSKLARLASIHFCD--LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVL 553
L L++L S++ + + T I QEW DY+L W+ Y GV+ L +P++ +WLPDIVL
Sbjct: 57 LELSLSQLISVNEREQIMTTSIWLKQEWTDYRLAWNSSCYEGVNILRIPAKRVWLPDIVL 116
Query: 554 YN 555
YN
Sbjct: 117 YN 118
>UNIPROTKB|G3N1V0 [details] [associations]
symbol:CHRNA5 "Neuronal acetylcholine receptor subunit
alpha-5" species:9913 "Bos taurus" [GO:0035095 "behavioral response
to nicotine" evidence=IEA] [GO:0015464 "acetylcholine receptor
activity" evidence=IEA] [GO:0005892 "acetylcholine-gated channel
complex" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0035095 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889 GO:GO:0005892
GO:GO:0015464 GeneTree:ENSGT00620000087732 EMBL:DAAA02052433
Ensembl:ENSBTAT00000065085 Uniprot:G3N1V0
Length = 506
Score = 793 (284.2 bits), Expect = 6.8e-79, P = 6.8e-79
Identities = 147/293 (50%), Positives = 200/293 (68%)
Query: 87 VNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNY 146
V+ + KNQ+MTTNVW+ QEW D KL+W+P++YGG+ + VPS+ +W PDIVL++NADG +
Sbjct: 66 VDVDEKNQLMTTNVWLKQEWIDVKLRWNPDDYGGIKLIRVPSDSLWTPDIVLFDNADGRF 125
Query: 147 EVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKH 206
E TK ++ YDG V W PPA YKS C IDV +FPFD+Q C MKFGSWTYDG VD+
Sbjct: 126 EGA-STKTVVRYDGTVTWTPPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDI-- 182
Query: 207 ILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTL 266
IL+ D DK +D++ + EW+I+ + + SCC PY I ++ ++R L
Sbjct: 183 ILEDQDVDK-------RDFFDNGEWEIVSATGSKGNRTDSCCWYPY--ITYSFVIKRLPL 233
Query: 267 FYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVP 326
FYT+ LIIPC+G+SFL+VLVFYLPS+ GEK+ LC EIIP +S +P
Sbjct: 234 FYTLFLIIPCIGLSFLTVLVFYLPSNEGEKICLCTSVLVSLTVFLLVIEEIIPSSSKVIP 293
Query: 327 LLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTH-VMKPWVHKVFIEVLPKIL 378
L+G+YL+FTMI VTLS++VT+ +N++ RS TH M PWV K+F+ LPK+L
Sbjct: 294 LIGEYLVFTMIFVTLSIMVTVFAINIHHRSSSTHDAMAPWVRKIFLHKLPKLL 346
Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 93/190 (48%), Positives = 127/190 (66%)
Query: 18 SLTFLVFSVIIAQGNDEAKR---LYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEV 74
S TF++ +A+ + AK L+ DL +Y R +RPV + +D++ +K GL +SQL++V
Sbjct: 9 SQTFILIFYRLAEPSVVAKHEDSLFKDLFQDYERWVRPVEHLNDRIKIKFGLAISQLVDV 68
Query: 75 NLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLP 134
+ KNQ+MTTNVW LK QEW D KL+W+P++YGG+ + VPS+ +W P
Sbjct: 69 DEKNQLMTTNVW----LK-----------QEWIDVKLRWNPDDYGGIKLIRVPSDSLWTP 113
Query: 135 DIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGS 194
DIVL++NADG +E TK ++ YDG V W PPA YKS C IDV +FPFD+Q C MKFGS
Sbjct: 114 DIVLFDNADGRFEGA-STKTVVRYDGTVTWTPPANYKSSCTIDVTFFPFDLQNCSMKFGS 172
Query: 195 WTYDGYTVDL 204
WTYDG VD+
Sbjct: 173 WTYDGSQVDI 182
Score = 137 (53.3 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 511 LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+ T + QEW D KL+W+P++YGG+ + VPS+ +W PDIVL++
Sbjct: 75 MTTNVWLKQEWIDVKLRWNPDDYGGIKLIRVPSDSLWTPDIVLFD 119
>UNIPROTKB|Q8SPU7 [details] [associations]
symbol:CHRNA5 "Neuronal acetylcholine receptor subunit
alpha-5" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
HOVERGEN:HBG003756 GO:GO:0004889 HOGENOM:HOG000006756
GeneTree:ENSGT00620000087732 EMBL:AF487464 IPI:IPI00706226
RefSeq:NP_776939.1 UniGene:Bt.9979 ProteinModelPortal:Q8SPU7
SMR:Q8SPU7 Ensembl:ENSBTAT00000018151 GeneID:282177 KEGG:bta:282177
CTD:1138 eggNOG:NOG267611 InParanoid:Q8SPU7 KO:K04807 OMA:WANILIP
OrthoDB:EOG41JZC6 NextBio:20806006 Uniprot:Q8SPU7
Length = 475
Score = 793 (284.2 bits), Expect = 6.8e-79, P = 6.8e-79
Identities = 147/293 (50%), Positives = 200/293 (68%)
Query: 87 VNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNY 146
V+ + KNQ+MTTNVW+ QEW D KL+W+P++YGG+ + VPS+ +W PDIVL++NADG +
Sbjct: 91 VDVDEKNQLMTTNVWLKQEWIDVKLRWNPDDYGGIKLIRVPSDSLWTPDIVLFDNADGRF 150
Query: 147 EVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKH 206
E TK ++ YDG V W PPA YKS C IDV +FPFD+Q C MKFGSWTYDG VD+
Sbjct: 151 EGA-STKTVVRYDGTVTWTPPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDI-- 207
Query: 207 ILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTL 266
IL+ D DK +D++ + EW+I+ + + SCC PY I ++ ++R L
Sbjct: 208 ILEDQDVDK-------RDFFDNGEWEIVSATGSKGNRTDSCCWYPY--ITYSFVIKRLPL 258
Query: 267 FYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVP 326
FYT+ LIIPC+G+SFL+VLVFYLPS+ GEK+ LC EIIP +S +P
Sbjct: 259 FYTLFLIIPCIGLSFLTVLVFYLPSNEGEKICLCTSVLVSLTVFLLVIEEIIPSSSKVIP 318
Query: 327 LLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTH-VMKPWVHKVFIEVLPKIL 378
L+G+YL+FTMI VTLS++VT+ +N++ RS TH M PWV K+F+ LPK+L
Sbjct: 319 LIGEYLVFTMIFVTLSIMVTVFAINIHHRSSSTHDAMAPWVRKIFLHKLPKLL 371
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 89/178 (50%), Positives = 121/178 (67%)
Query: 27 IIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVW 86
++A+ D L+ DL +Y R +RPV + +D++ +K GL +SQL++V+ KNQ+MTTNVW
Sbjct: 49 VVAKHEDS---LFKDLFQDYERWVRPVEHLNDRIKIKFGLAISQLVDVDEKNQLMTTNVW 105
Query: 87 VNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNY 146
LK QEW D KL+W+P++YGG+ + VPS+ +W PDIVL++NADG +
Sbjct: 106 ----LK-----------QEWIDVKLRWNPDDYGGIKLIRVPSDSLWTPDIVLFDNADGRF 150
Query: 147 EVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
E TK ++ YDG V W PPA YKS C IDV +FPFD+Q C MKFGSWTYDG VD+
Sbjct: 151 EGA-STKTVVRYDGTVTWTPPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDI 207
Score = 137 (53.3 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 511 LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+ T + QEW D KL+W+P++YGG+ + VPS+ +W PDIVL++
Sbjct: 100 MTTNVWLKQEWIDVKLRWNPDDYGGIKLIRVPSDSLWTPDIVLFD 144
>ZFIN|ZDB-GENE-050417-440 [details] [associations]
symbol:chrna5 "cholinergic receptor, nicotinic,
alpha 5" species:7955 "Danio rerio" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 ZFIN:ZDB-GENE-050417-440 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 GeneTree:ENSGT00620000087732 CTD:1138
eggNOG:NOG267611 KO:K04807 OMA:WANILIP OrthoDB:EOG41JZC6
EMBL:CT027604 EMBL:BC092962 IPI:IPI00570130 RefSeq:NP_001017885.1
UniGene:Dr.87327 SMR:Q567Y7 Ensembl:ENSDART00000021372
GeneID:550584 KEGG:dre:550584 NextBio:20879821 Uniprot:Q567Y7
Length = 466
Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
Identities = 148/293 (50%), Positives = 203/293 (69%)
Query: 87 VNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNY 146
V+ + KNQ+MTTNVW+ QEW D KL+W P+ Y G+ ++ VPS+ IW+PDIVLY+NADGN+
Sbjct: 73 VDVDEKNQLMTTNVWMKQEWTDLKLRWDPDHYLGITSIRVPSDSIWIPDIVLYDNADGNF 132
Query: 147 EVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKH 206
E T+ TKA++ +DG + W PPA YKS C IDV +FPFD+Q C MKFGSWTYDG VD+
Sbjct: 133 EATV-TKAVVRFDGTISWTPPANYKSACTIDVTFFPFDLQNCSMKFGSWTYDGSQVDI-- 189
Query: 207 ILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTL 266
+L+ D+ +D +DY+ + EW+I+K A N YP I ++ +RR L
Sbjct: 190 LLE-------DVHVDKRDYFDNGEWEIVK--ATGNRGLRRDGTFFYPSITYSFIIRRLPL 240
Query: 267 FYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVP 326
FYT+ LIIPC+G+SFL+VLVFYLPS+ GEK+SLC EIIP +S +P
Sbjct: 241 FYTLFLIIPCIGLSFLTVLVFYLPSNGGEKISLCTSVLVSLTVFLLVIEEIIPSSSKVIP 300
Query: 327 LLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTH-VMKPWVHKVFIEVLPKIL 378
L+G+YL+FTMI VTLS+V+T+ +N++ RS TH M PWV ++F+ LP++L
Sbjct: 301 LIGEYLVFTMIFVTLSIVITVFAINIHHRSSSTHHSMAPWVRRIFLHHLPRLL 353
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 86/168 (51%), Positives = 117/168 (69%)
Query: 37 RLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIM 96
+L+ L SNY + +RP+ + + + VK GL +SQL++V+ KNQ+MTTNVW+ Q
Sbjct: 38 KLFKHLFSNYQKWVRPIEDLNTTIQVKFGLAISQLVDVDEKNQLMTTNVWMKQ------- 90
Query: 97 TTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAIL 156
EW D KL+W P+ Y G+ ++ VPS+ IW+PDIVLY+NADGN+E T+ TKA++
Sbjct: 91 --------EWTDLKLRWDPDHYLGITSIRVPSDSIWIPDIVLYDNADGNFEATV-TKAVV 141
Query: 157 HYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
+DG + W PPA YKS C IDV +FPFD+Q C MKFGSWTYDG VD+
Sbjct: 142 RFDGTISWTPPANYKSACTIDVTFFPFDLQNCSMKFGSWTYDGSQVDI 189
Score = 137 (53.3 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 511 LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+ T + QEW D KL+W P+ Y G+ ++ VPS+ IW+PDIVLY+
Sbjct: 82 MTTNVWMKQEWTDLKLRWDPDHYLGITSIRVPSDSIWIPDIVLYD 126
>RGD|2347 [details] [associations]
symbol:Chrna5 "cholinergic receptor, nicotinic, alpha 5 (neuronal)"
species:10116 "Rattus norvegicus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA;IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005892 "acetylcholine-gated channel complex" evidence=IEA;ISO]
[GO:0015464 "acetylcholine receptor activity" evidence=IEA;ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030425 "dendrite" evidence=IDA]
[GO:0035094 "response to nicotine" evidence=ISO] [GO:0035095
"behavioral response to nicotine" evidence=IEA;ISO] [GO:0042166
"acetylcholine binding" evidence=IDA] [GO:0043025 "neuronal cell
body" evidence=IDA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 RGD:2347 GO:GO:0005886
GO:GO:0035095 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GO:GO:0043025 GO:GO:0030425 GO:GO:0042166 HOVERGEN:HBG003756
GO:GO:0004889 HOGENOM:HOG000006756 GO:GO:0005892 GO:GO:0015464
eggNOG:NOG267611 OrthoDB:EOG41JZC6 EMBL:J05231 IPI:IPI00325218
PIR:A35721 UniGene:Rn.40125 ProteinModelPortal:P20420 SMR:P20420
STRING:P20420 PRIDE:P20420 UCSC:RGD:2347 InParanoid:P20420
BindingDB:P20420 ChEMBL:CHEMBL4960 ArrayExpress:P20420
Genevestigator:P20420 GermOnline:ENSRNOG00000013610 Uniprot:P20420
Length = 452
Score = 786 (281.7 bits), Expect = 3.8e-78, P = 3.8e-78
Identities = 147/299 (49%), Positives = 204/299 (68%)
Query: 87 VNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNY 146
V+ + KNQ+MTTNVW+ QEW D KL+W+P++YGG+ + VPS+ +W+PDIVL++NADG +
Sbjct: 69 VDVDEKNQLMTTNVWLKQEWIDVKLRWNPDDYGGIKIIRVPSDSLWIPDIVLFDNADGRF 128
Query: 147 EVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKH 206
E TK ++ Y+G V W PA YKS C IDV +FPFD+Q C MKFGSWTYDG VD+
Sbjct: 129 EGA-STKTVVRYNGTVTWTQPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDI-- 185
Query: 207 ILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTL 266
IL+ D D +D D++ + EW+IM + + SCC PY I ++ ++R L
Sbjct: 186 ILE--DQD-----VDRTDFFDNGEWEIMSAMGSKGNRTDSCCWYPY--ITYSFVIKRLPL 236
Query: 267 FYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVP 326
FYT+ LIIPC+G+SFL+V+VFYLPS+ GEK+SLC EIIP +S +P
Sbjct: 237 FYTLFLIIPCIGLSFLTVVVFYLPSNEGEKISLCTSVLVSLTVFLLVIEEIIPSSSKVIP 296
Query: 327 LLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTH-VMKPWVHKVFIEVLPKILFIQRPA 384
L+G+YL+FTMI VTLS++VT+ +N++ RS TH M PWV K+F+ LPK+L ++ A
Sbjct: 297 LIGEYLVFTMIFVTLSIMVTVFAINIHHRSSSTHNAMAPWVRKIFLHKLPKLLCMRSHA 355
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 87/167 (52%), Positives = 116/167 (69%)
Query: 38 LYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMT 97
L+ DL +Y R +RPV + SDK+ +K GL +SQL++V+ KNQ+MTTNVW LK
Sbjct: 35 LFRDLFEDYERWVRPVEHLSDKIKIKFGLAISQLVDVDEKNQLMTTNVW----LK----- 85
Query: 98 TNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILH 157
QEW D KL+W+P++YGG+ + VPS+ +W+PDIVL++NADG +E TK ++
Sbjct: 86 ------QEWIDVKLRWNPDDYGGIKIIRVPSDSLWIPDIVLFDNADGRFEGA-STKTVVR 138
Query: 158 YDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
Y+G V W PA YKS C IDV +FPFD+Q C MKFGSWTYDG VD+
Sbjct: 139 YNGTVTWTQPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDI 185
Score = 140 (54.3 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 21/45 (46%), Positives = 34/45 (75%)
Query: 511 LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+ T + QEW D KL+W+P++YGG+ + VPS+ +W+PDIVL++
Sbjct: 78 MTTNVWLKQEWIDVKLRWNPDDYGGIKIIRVPSDSLWIPDIVLFD 122
>UNIPROTKB|G3V9X4 [details] [associations]
symbol:Chrna5 "Neuronal acetylcholine receptor subunit
alpha-5" species:10116 "Rattus norvegicus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005892 "acetylcholine-gated channel complex"
evidence=IEA] [GO:0015464 "acetylcholine receptor activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0035095
"behavioral response to nicotine" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 RGD:2347 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087732 CTD:1138 KO:K04807 UniGene:Rn.40125
EMBL:CH473975 RefSeq:NP_058774.2 ProteinModelPortal:G3V9X4
Ensembl:ENSRNOT00000065771 GeneID:25102 KEGG:rno:25102
Uniprot:G3V9X4
Length = 467
Score = 786 (281.7 bits), Expect = 3.8e-78, P = 3.8e-78
Identities = 147/299 (49%), Positives = 204/299 (68%)
Query: 87 VNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNY 146
V+ + KNQ+MTTNVW+ QEW D KL+W+P++YGG+ + VPS+ +W+PDIVL++NADG +
Sbjct: 84 VDVDEKNQLMTTNVWLKQEWIDVKLRWNPDDYGGIKIIRVPSDSLWIPDIVLFDNADGRF 143
Query: 147 EVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKH 206
E TK ++ Y+G V W PA YKS C IDV +FPFD+Q C MKFGSWTYDG VD+
Sbjct: 144 EGA-STKTVVRYNGTVTWTQPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDI-- 200
Query: 207 ILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTL 266
IL+ D D +D D++ + EW+IM + + SCC PY I ++ ++R L
Sbjct: 201 ILE--DQD-----VDRTDFFDNGEWEIMSAMGSKGNRTDSCCWYPY--ITYSFVIKRLPL 251
Query: 267 FYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVP 326
FYT+ LIIPC+G+SFL+V+VFYLPS+ GEK+SLC EIIP +S +P
Sbjct: 252 FYTLFLIIPCIGLSFLTVVVFYLPSNEGEKISLCTSVLVSLTVFLLVIEEIIPSSSKVIP 311
Query: 327 LLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTH-VMKPWVHKVFIEVLPKILFIQRPA 384
L+G+YL+FTMI VTLS++VT+ +N++ RS TH M PWV K+F+ LPK+L ++ A
Sbjct: 312 LIGEYLVFTMIFVTLSIMVTVFAINIHHRSSSTHNAMAPWVRKIFLHKLPKLLCMRSHA 370
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 87/167 (52%), Positives = 116/167 (69%)
Query: 38 LYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMT 97
L+ DL +Y R +RPV + SDK+ +K GL +SQL++V+ KNQ+MTTNVW LK
Sbjct: 50 LFRDLFEDYERWVRPVEHLSDKIKIKFGLAISQLVDVDEKNQLMTTNVW----LK----- 100
Query: 98 TNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILH 157
QEW D KL+W+P++YGG+ + VPS+ +W+PDIVL++NADG +E TK ++
Sbjct: 101 ------QEWIDVKLRWNPDDYGGIKIIRVPSDSLWIPDIVLFDNADGRFEGA-STKTVVR 153
Query: 158 YDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
Y+G V W PA YKS C IDV +FPFD+Q C MKFGSWTYDG VD+
Sbjct: 154 YNGTVTWTQPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDI 200
Score = 140 (54.3 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 21/45 (46%), Positives = 34/45 (75%)
Query: 511 LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+ T + QEW D KL+W+P++YGG+ + VPS+ +W+PDIVL++
Sbjct: 93 MTTNVWLKQEWIDVKLRWNPDDYGGIKIIRVPSDSLWIPDIVLFD 137
>UNIPROTKB|Q6PW50 [details] [associations]
symbol:Chrna5 "Neuronal acetylcholine receptor subunit
alpha-5" species:10116 "Rattus norvegicus" [GO:0030054 "cell
junction" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 RGD:2347 GO:GO:0035095 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
GO:GO:0005892 GO:GO:0015464 OMA:WANILIP UniGene:Rn.40125
EMBL:AY574255 IPI:IPI00951199 SMR:Q6PW50 STRING:Q6PW50
Ensembl:ENSRNOT00000018241 InParanoid:Q6PW50 Genevestigator:Q6PW50
Uniprot:Q6PW50
Length = 452
Score = 786 (281.7 bits), Expect = 3.8e-78, P = 3.8e-78
Identities = 147/299 (49%), Positives = 204/299 (68%)
Query: 87 VNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNY 146
V+ + KNQ+MTTNVW+ QEW D KL+W+P++YGG+ + VPS+ +W+PDIVL++NADG +
Sbjct: 69 VDVDEKNQLMTTNVWLKQEWIDVKLRWNPDDYGGIKIIRVPSDSLWIPDIVLFDNADGRF 128
Query: 147 EVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKH 206
E TK ++ Y+G V W PA YKS C IDV +FPFD+Q C MKFGSWTYDG VD+
Sbjct: 129 EGA-STKTVVRYNGTVTWTQPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDI-- 185
Query: 207 ILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTL 266
IL+ D D +D D++ + EW+IM + + SCC PY I ++ ++R L
Sbjct: 186 ILE--DQD-----VDRTDFFDNGEWEIMSAMGSKGNRTDSCCWYPY--ITYSFVIKRLPL 236
Query: 267 FYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVP 326
FYT+ LIIPC+G+SFL+V+VFYLPS+ GEK+SLC EIIP +S +P
Sbjct: 237 FYTLFLIIPCIGLSFLTVVVFYLPSNEGEKISLCTSVLVSLTVFLLVIEEIIPSSSKVIP 296
Query: 327 LLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTH-VMKPWVHKVFIEVLPKILFIQRPA 384
L+G+YL+FTMI VTLS++VT+ +N++ RS TH M PWV K+F+ LPK+L ++ A
Sbjct: 297 LIGEYLVFTMIFVTLSIMVTVFAINIHHRSSSTHNAMAPWVRKIFLHKLPKLLCMRSHA 355
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 87/167 (52%), Positives = 116/167 (69%)
Query: 38 LYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMT 97
L+ DL +Y R +RPV + SDK+ +K GL +SQL++V+ KNQ+MTTNVW LK
Sbjct: 35 LFRDLFEDYERWVRPVEHLSDKIKIKFGLAISQLVDVDEKNQLMTTNVW----LK----- 85
Query: 98 TNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILH 157
QEW D KL+W+P++YGG+ + VPS+ +W+PDIVL++NADG +E TK ++
Sbjct: 86 ------QEWIDVKLRWNPDDYGGIKIIRVPSDSLWIPDIVLFDNADGRFEGA-STKTVVR 138
Query: 158 YDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
Y+G V W PA YKS C IDV +FPFD+Q C MKFGSWTYDG VD+
Sbjct: 139 YNGTVTWTQPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDI 185
Score = 140 (54.3 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 21/45 (46%), Positives = 34/45 (75%)
Query: 511 LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+ T + QEW D KL+W+P++YGG+ + VPS+ +W+PDIVL++
Sbjct: 78 MTTNVWLKQEWIDVKLRWNPDDYGGIKIIRVPSDSLWIPDIVLFD 122
>UNIPROTKB|P26152 [details] [associations]
symbol:CHRNA5 "Neuronal acetylcholine receptor subunit
alpha-5" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 CTD:1138 eggNOG:NOG267611 KO:K04807
OrthoDB:EOG41JZC6 EMBL:J05642 IPI:IPI00571201 PIR:B39218
RefSeq:NP_989746.1 UniGene:Gga.26200 ProteinModelPortal:P26152
SMR:P26152 GeneID:386577 KEGG:gga:386577 InParanoid:P26152
NextBio:20813940 Uniprot:P26152
Length = 454
Score = 786 (281.7 bits), Expect = 3.8e-78, P = 3.8e-78
Identities = 145/293 (49%), Positives = 199/293 (67%)
Query: 87 VNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNY 146
V+ + KNQ+MTTNVW+ QEW KL+W+PE+Y G+ ++ VPS+ IW+PDIVLY+NADG +
Sbjct: 70 VDVDEKNQLMTTNVWLKQEWIHVKLRWNPEDYAGITSIRVPSDSIWIPDIVLYDNADGRF 129
Query: 147 EVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKH 206
E T TK ++ YDG + W PP YKS C IDV +FPFD+Q C MKFGSWTYDG VD+
Sbjct: 130 EGT-STKTVVKYDGTIAWTPPVNYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDI-- 186
Query: 207 ILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTL 266
IL+ D +D +D++ + EW+I+ + + CC YP + ++ +RR L
Sbjct: 187 ILE-------DYEVDKRDFFDNGEWEIVTATGSKGNRTDGCCW--YPFVTYSFIIRRLPL 237
Query: 267 FYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVP 326
FYT+ LIIPC+G+SFL+VLVFYLPS+ EK+SLC EIIP +S +P
Sbjct: 238 FYTLFLIIPCIGLSFLTVLVFYLPSNEAEKISLCTSVLVSLTVFLLVIEEIIPSSSKVIP 297
Query: 327 LLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTH-VMKPWVHKVFIEVLPKIL 378
L+G+YL+FTMI VTLS+V+T+ +N++ RS TH M PWV K+F+ LPK+L
Sbjct: 298 LIGEYLVFTMIFVTLSIVITVFAINIHHRSSSTHNAMAPWVRKIFLHKLPKLL 350
Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 89/177 (50%), Positives = 119/177 (67%)
Query: 28 IAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWV 87
+A+ D RL+ L +Y R +RPV + +D + +K GL +SQL++V+ KNQ+MTTNVW
Sbjct: 29 VAKSED---RLFKHLFEDYQRWVRPVEHLNDTIKIKFGLAISQLVDVDEKNQLMTTNVW- 84
Query: 88 NQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYE 147
LK QEW KL+W+PE+Y G+ ++ VPS+ IW+PDIVLY+NADG +E
Sbjct: 85 ---LK-----------QEWIHVKLRWNPEDYAGITSIRVPSDSIWIPDIVLYDNADGRFE 130
Query: 148 VTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
T TK ++ YDG + W PP YKS C IDV +FPFD+Q C MKFGSWTYDG VD+
Sbjct: 131 GT-STKTVVKYDGTIAWTPPVNYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDI 186
Score = 138 (53.6 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 22/45 (48%), Positives = 33/45 (73%)
Query: 511 LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+ T + QEW KL+W+PE+Y G+ ++ VPS+ IW+PDIVLY+
Sbjct: 79 MTTNVWLKQEWIHVKLRWNPEDYAGITSIRVPSDSIWIPDIVLYD 123
>MGI|MGI:87889 [details] [associations]
symbol:Chrna5 "cholinergic receptor, nicotinic, alpha
polypeptide 5" species:10090 "Mus musculus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISO] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0005892 "acetylcholine-gated channel complex" evidence=IPI]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0015464 "acetylcholine receptor activity"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=ISO] [GO:0035094
"response to nicotine" evidence=IMP] [GO:0035095 "behavioral
response to nicotine" evidence=ISO] [GO:0042166 "acetylcholine
binding" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 MGI:MGI:87889 GO:GO:0035095
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0043025
GO:GO:0030425 GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 GO:GO:0005892 GO:GO:0015464
GeneTree:ENSGT00620000087732 GO:GO:0035094 CTD:1138
eggNOG:NOG267611 KO:K04807 OMA:WANILIP OrthoDB:EOG41JZC6
EMBL:AY574264 EMBL:DQ318788 EMBL:BC106853 IPI:IPI00135097
IPI:IPI00753293 RefSeq:NP_789814.2 UniGene:Mm.103778
ProteinModelPortal:Q2MKA5 SMR:Q2MKA5 STRING:Q2MKA5
PhosphoSite:Q2MKA5 PRIDE:Q2MKA5 Ensembl:ENSMUST00000093844
GeneID:110835 KEGG:mmu:110835 UCSC:uc009prv.2 UCSC:uc009prw.2
InParanoid:Q2MKA5 NextBio:364755 Bgee:Q2MKA5 Genevestigator:Q2MKA5
Uniprot:Q2MKA5
Length = 467
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 147/299 (49%), Positives = 204/299 (68%)
Query: 87 VNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNY 146
V+ + KNQ+MTTNVW+ QEW D KL+W+P++YGG+ + VPS+ +W+PDIVL++NADG +
Sbjct: 84 VDVDEKNQLMTTNVWLKQEWIDVKLRWNPDDYGGIKIIRVPSDSLWIPDIVLFDNADGRF 143
Query: 147 EVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKH 206
E TK ++ Y+G V W PA YKS C IDV +FPFD+Q C MKFGSWTYDG VD+
Sbjct: 144 EGA-STKTVVRYNGTVTWTQPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDI-- 200
Query: 207 ILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTL 266
IL+ D D +D D++ + EW+IM + + SCC YP I ++ ++R L
Sbjct: 201 ILE--DQD-----VDRTDFFDNGEWEIMSAMGSKGNRTDSCCW--YPCITYSFVIKRLPL 251
Query: 267 FYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVP 326
FYT+ LIIPC+G+SFL+V+VFYLPS+ GEK+SLC EIIP +S +P
Sbjct: 252 FYTLFLIIPCIGLSFLTVVVFYLPSNEGEKISLCTSVLVSLTVFLLVIEEIIPSSSKVIP 311
Query: 327 LLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTH-VMKPWVHKVFIEVLPKILFIQRPA 384
L+G+YL+FTMI VTLS++VT+ +N++ RS TH M PWV K+F+ LPK+L ++ A
Sbjct: 312 LIGEYLVFTMIFVTLSIMVTVFAINIHHRSSSTHNAMAPWVRKIFLHKLPKLLCMRSHA 370
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 86/167 (51%), Positives = 116/167 (69%)
Query: 38 LYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMT 97
L+ DL +Y + +RPV + SDK+ +K GL +SQL++V+ KNQ+MTTNVW LK
Sbjct: 50 LFRDLFEDYEKWVRPVEHLSDKIKIKFGLAISQLVDVDEKNQLMTTNVW----LK----- 100
Query: 98 TNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILH 157
QEW D KL+W+P++YGG+ + VPS+ +W+PDIVL++NADG +E TK ++
Sbjct: 101 ------QEWIDVKLRWNPDDYGGIKIIRVPSDSLWIPDIVLFDNADGRFEGA-STKTVVR 153
Query: 158 YDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
Y+G V W PA YKS C IDV +FPFD+Q C MKFGSWTYDG VD+
Sbjct: 154 YNGTVTWTQPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDI 200
Score = 140 (54.3 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 21/45 (46%), Positives = 34/45 (75%)
Query: 511 LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+ T + QEW D KL+W+P++YGG+ + VPS+ +W+PDIVL++
Sbjct: 93 MTTNVWLKQEWIDVKLRWNPDDYGGIKIIRVPSDSLWIPDIVLFD 137
>UNIPROTKB|P30532 [details] [associations]
symbol:CHRNA5 "Neuronal acetylcholine receptor subunit
alpha-5" species:9606 "Homo sapiens" [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=NAS;TAS] [GO:0015276 "ligand-gated ion channel
activity" evidence=TAS] [GO:0015464 "acetylcholine receptor
activity" evidence=IDA] [GO:0005892 "acetylcholine-gated channel
complex" evidence=IC] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0035095 "behavioral response to nicotine"
evidence=IMP] [GO:0007165 "signal transduction" evidence=NAS]
[GO:0006810 "transport" evidence=NAS] [GO:0005886 "plasma membrane"
evidence=TAS] Reactome:REACT_13685 InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0035095 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0043025 GO:GO:0030425
GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889 HOGENOM:HOG000006756
GO:GO:0005892 GO:GO:0015464 MIM:612052 CTD:1138 eggNOG:NOG267611
KO:K04807 OMA:WANILIP OrthoDB:EOG41JZC6 EMBL:M83712 EMBL:U62434
EMBL:Y08419 EMBL:AJ306481 EMBL:AJ306482 EMBL:AJ306483 EMBL:AJ306484
EMBL:AJ306485 EMBL:AJ306486 EMBL:BC033639 IPI:IPI00295323
PIR:A38223 RefSeq:NP_000736.2 UniGene:Hs.1614 UniGene:Hs.719767
ProteinModelPortal:P30532 SMR:P30532 STRING:P30532
PhosphoSite:P30532 DMDM:2506126 PaxDb:P30532 PRIDE:P30532
DNASU:1138 Ensembl:ENST00000299565 GeneID:1138 KEGG:hsa:1138
UCSC:uc002bdy.3 GeneCards:GC15P078857 HGNC:HGNC:1959 MIM:118505
neXtProt:NX_P30532 PharmGKB:PA26491 InParanoid:P30532
PhylomeDB:P30532 BindingDB:P30532 ChEMBL:CHEMBL2454 GenomeRNAi:1138
NextBio:4734 ArrayExpress:P30532 Bgee:P30532 CleanEx:HS_CHRNA5
Genevestigator:P30532 Uniprot:P30532
Length = 468
Score = 784 (281.0 bits), Expect = 6.2e-78, P = 6.2e-78
Identities = 145/293 (49%), Positives = 200/293 (68%)
Query: 87 VNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNY 146
V+ + KNQ+MTTNVW+ QEW D KL+W+P++YGG+ + VPS+ +W PDIVL++NADG +
Sbjct: 84 VDVDEKNQLMTTNVWLKQEWIDVKLRWNPDDYGGIKVIRVPSDSVWTPDIVLFDNADGRF 143
Query: 147 EVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKH 206
E T TK ++ Y+G V W PPA YKS C IDV +FPFD+Q C MKFGSWTYDG VD+
Sbjct: 144 EGT-STKTVIRYNGTVTWTPPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDI-- 200
Query: 207 ILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTL 266
IL+ D DK +D++ + EW+I+ + + SCC PY + ++ ++R L
Sbjct: 201 ILEDQDVDK-------RDFFDNGEWEIVSATGSKGNRTDSCCWYPY--VTYSFVIKRLPL 251
Query: 267 FYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVP 326
FYT+ LIIPC+G+SFL+VLVFYLPS+ GEK+ LC EIIP +S +P
Sbjct: 252 FYTLFLIIPCIGLSFLTVLVFYLPSNEGEKICLCTSVLVSLTVFLLVIEEIIPSSSKVIP 311
Query: 327 LLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTH-VMKPWVHKVFIEVLPKIL 378
L+G+YL+FTMI VTLS++VT+ +N++ RS TH M P V K+F+ LPK+L
Sbjct: 312 LIGEYLVFTMIFVTLSIMVTVFAINIHHRSSSTHNAMAPLVRKIFLHTLPKLL 364
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 88/167 (52%), Positives = 116/167 (69%)
Query: 38 LYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMT 97
L DL +Y R +RPV + +DK+ +K GL +SQL++V+ KNQ+MTTNVW LK
Sbjct: 50 LLKDLFQDYERWVRPVEHLNDKIKIKFGLAISQLVDVDEKNQLMTTNVW----LK----- 100
Query: 98 TNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILH 157
QEW D KL+W+P++YGG+ + VPS+ +W PDIVL++NADG +E T TK ++
Sbjct: 101 ------QEWIDVKLRWNPDDYGGIKVIRVPSDSVWTPDIVLFDNADGRFEGT-STKTVIR 153
Query: 158 YDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
Y+G V W PPA YKS C IDV +FPFD+Q C MKFGSWTYDG VD+
Sbjct: 154 YNGTVTWTPPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDI 200
Score = 139 (54.0 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 511 LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+ T + QEW D KL+W+P++YGG+ + VPS+ +W PDIVL++
Sbjct: 93 MTTNVWLKQEWIDVKLRWNPDDYGGIKVIRVPSDSVWTPDIVLFD 137
>UNIPROTKB|E7ENE5 [details] [associations]
symbol:CHRNA1 "Acetylcholine receptor subunit alpha"
species:9606 "Homo sapiens" [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
HGNC:HGNC:1955 EMBL:AC018890 IPI:IPI00916135
ProteinModelPortal:E7ENE5 SMR:E7ENE5 Ensembl:ENST00000409219
UCSC:uc002ujf.4 ArrayExpress:E7ENE5 Bgee:E7ENE5 Uniprot:E7ENE5
Length = 377
Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
Identities = 158/355 (44%), Positives = 220/355 (61%)
Query: 19 LTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKN 78
L F + S + G++ RL L +Y+ ++RPV ++ + V +GL+L QLI V+ N
Sbjct: 8 LLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINVDEVN 67
Query: 79 QIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVL 138
QI+TTNV LK Q+W DY LKW+P++YGGV +H+PSE IW PD+VL
Sbjct: 68 QIVTTNV----RLK-----------QQWVDYNLKWNPDDYGGVKKIHIPSEKIWRPDLVL 112
Query: 139 YNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYD 198
YNNADG++ + TK +L Y G + W PPAI+KS+CEI V +FPFD Q C MK G+WTYD
Sbjct: 113 YNNADGDFAIVKFTKVLLQYTGHITWTPPAIFKSYCEIIVTHFPFDEQNCSMKLGTWTYD 172
Query: 199 GYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEE-PYPDIIF 257
G V + P+SD+ D L ++ S EW I + ++ YSCC + PY DI +
Sbjct: 173 GSVVAIN-----PESDQPD----LSNFMESGEWVIKESRGWKHSVTYSCCPDTPYLDITY 223
Query: 258 NITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEI 317
+ ++R L++ VN+IIPC+ SFL+ LVFYLP+DSGEK++L E+
Sbjct: 224 HFVMQRLPLYFIVNVIIPCLLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVEL 283
Query: 318 IPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIE 372
IP TS VPL+GKY+LFTM+ V S+++T+ V+N + RSP THVM WV K E
Sbjct: 284 IPSTSSAVPLIGKYMLFTMVFVIASIIITVIVINTHHRSPSTHVMPNWVRKAAAE 338
Score = 163 (62.4 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 25/43 (58%), Positives = 33/43 (76%)
Query: 513 TPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
T + Q+W DY LKW+P++YGGV +H+PSE IW PD+VLYN
Sbjct: 72 TNVRLKQQWVDYNLKWNPDDYGGVKKIHIPSEKIWRPDLVLYN 114
>ZFIN|ZDB-GENE-980526-137 [details] [associations]
symbol:chrna1 "cholinergic receptor, nicotinic,
alpha polypeptide 1" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004889 "acetylcholine-activated cation-selective
channel activity" evidence=IEA] [GO:0007271 "synaptic transmission,
cholinergic" evidence=IDA] [GO:0048705 "skeletal system
morphogenesis" evidence=IMP] [GO:0003428 "chondrocyte intercalation
involved in growth plate cartilage morphogenesis" evidence=IMP]
[GO:0086009 "membrane repolarization" evidence=IMP] [GO:0030516
"regulation of axon extension" evidence=IMP] [GO:0007274
"neuromuscular synaptic transmission" evidence=IDA] [GO:0008045
"motor neuron axon guidance" evidence=IMP] [GO:0005261 "cation
channel activity" evidence=IDA] [GO:0005892 "acetylcholine-gated
channel complex" evidence=IDA;IMP] [GO:0042166 "acetylcholine
binding" evidence=IMP] [GO:0048741 "skeletal muscle fiber
development" evidence=IMP] [GO:0043113 "receptor clustering"
evidence=IMP] [GO:0015464 "acetylcholine receptor activity"
evidence=IDA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236
ZFIN:ZDB-GENE-980526-137 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007274 GO:GO:0007271
GO:GO:0008045 GO:GO:0005261 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 GeneTree:ENSGT00630000089708 GO:GO:0005892
CTD:1134 eggNOG:NOG314424 KO:K04803 OrthoDB:EOG4KSPJW EMBL:AH003668
EMBL:U70437 EMBL:U70438 EMBL:BC081554 IPI:IPI00484016
RefSeq:NP_571520.1 UniGene:Dr.75091 ProteinModelPortal:Q98880
SMR:Q98880 STRING:Q98880 Ensembl:ENSDART00000020261 GeneID:30725
KEGG:dre:30725 OMA:YSCCPDT NextBio:20807074 ArrayExpress:Q98880
Bgee:Q98880 GO:GO:0003428 GO:GO:0086009 GO:GO:0043113 GO:GO:0030516
GO:GO:0048741 Uniprot:Q98880
Length = 456
Score = 782 (280.3 bits), Expect = 1.0e-77, P = 1.0e-77
Identities = 153/357 (42%), Positives = 228/357 (63%)
Query: 32 NDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNL 91
+++ RL L + YN+++RPV + D + V +GL+L QLI V+ NQI+T+NV L
Sbjct: 21 SEDETRLVKTLFTGYNKVVRPVSHFKDPVVVTVGLQLIQLISVDEVNQIVTSNV----RL 76
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
K Q+W+D L+W+P++YGG+ + +PS +W PD+VLYNNADG++ +
Sbjct: 77 K-----------QQWKDVHLQWNPDDYGGIRKIRIPSTDLWKPDLVLYNNADGDFAIVHE 125
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
TK +L + G + W PPAI+KS+CEI V +FPFD+Q C MK G+WTYDG V + P
Sbjct: 126 TKVLLEHTGMITWTPPAIFKSYCEIVVLHFPFDLQNCSMKLGTWTYDGNLVIIN-----P 180
Query: 212 DSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEE-PYPDIIFNITLRRKTLFYTV 270
DSD+ D L ++ S EW + + ++ +Y+CC + PY DI ++ L R L++ V
Sbjct: 181 DSDRPD----LSNFMESGEWVMKDYRSWKHWVYYACCPDTPYLDITYHFLLLRLPLYFIV 236
Query: 271 NLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGK 330
N+IIPC+ SFL+ LVFYLP+DSGEK++L E+IP TS VPL+GK
Sbjct: 237 NVIIPCMLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGK 296
Query: 331 YLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILF---IQRPA 384
Y+LFTMI V S+++T+ V+N + RSP TH+M WV K+FI+ +P ++F ++RP+
Sbjct: 297 YMLFTMIFVIASIIITVIVINTHHRSPSTHIMPAWVRKIFIDTIPNMMFFSTMKRPS 353
Score = 132 (51.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 18/41 (43%), Positives = 30/41 (73%)
Query: 515 INFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+ Q+W+D L+W+P++YGG+ + +PS +W PD+VLYN
Sbjct: 74 VRLKQQWKDVHLQWNPDDYGGIRKIRIPSTDLWKPDLVLYN 114
>WB|WBGene00000047 [details] [associations]
symbol:acr-8 species:6239 "Caenorhabditis elegans"
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 HSSP:P02711
GO:GO:0004889 HOGENOM:HOG000006756 GeneTree:ENSGT00630000089708
KO:K05312 EMBL:Z50029 PIR:T27619 RefSeq:NP_509745.2
ProteinModelPortal:Q23355 SMR:Q23355 MINT:MINT-3383737
STRING:Q23355 EnsemblMetazoa:ZC504.2 GeneID:181246
KEGG:cel:CELE_ZC504.2 UCSC:ZC504.2 CTD:181246 WormBase:ZC504.2
eggNOG:NOG268048 InParanoid:Q23355 OMA:DFYIDIT NextBio:913080
Uniprot:Q23355
Length = 537
Score = 779 (279.3 bits), Expect = 2.1e-77, P = 2.1e-77
Identities = 149/360 (41%), Positives = 229/360 (63%)
Query: 32 NDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNL 91
N A ++Y+DLL YN+ +RP+ N S+ + VK G L ++I+V+ ++
Sbjct: 22 NRYADQMYEDLLYYYNKNVRPIKNASESVKVKFGSSLIRIIDVD---EV----------- 67
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
NQ++TTN+W+ +W DY+L W P +G + LHVP + IW+PDI+LYNNADG +TIM
Sbjct: 68 -NQVLTTNLWLEMQWFDYRLMWDPGRWGKIRKLHVPVDQIWIPDILLYNNADGEPHITIM 126
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
+ AI++Y+G VVW PP+IYKSFC ID+EYFP+D QTC MKFG WTY+G+ +D++ +
Sbjct: 127 SDAIVYYNGLVVWKPPSIYKSFCSIDIEYFPYDTQTCWMKFGGWTYNGFLLDVRQLPVEE 186
Query: 212 -----DSDKIDI---GIDLQDYYLSVEWDIMKVPAVRNEKFYS-CC-EEPYPDIIFNITL 261
+ K+ + + ++ S+EWD+M++ + R+EK Y+ CC ++ Y DI F I +
Sbjct: 187 WTLVVTTRKLQVCAHASSISFFFRSLEWDLMELNSARHEKIYAGCCGQDFYIDITFKIEI 246
Query: 262 RRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPT 321
RRKTLFYT+NL+IPC + L+ +VFY+P K++ +++PPT
Sbjct: 247 RRKTLFYTINLMIPCTMFAILTSIVFYVPPIE-HKMTFSISILVTLTVFYLILIDLVPPT 305
Query: 322 SLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQ 381
SL +PL+GKYLLFTM LV++S+++++ LN R + M W+ VFI LP+ + I+
Sbjct: 306 SLVIPLIGKYLLFTMFLVSISIMLSVISLNFYRRDGSSFPMPHWMKVVFIHTLPRYICIK 365
Score = 129 (50.5 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 498 SKLARLASIHFCD-LLTPINFLQ-EWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
S L R+ + + +LT +L+ +W DY+L W P +G + LHVP + IW+PDI+LYN
Sbjct: 56 SSLIRIIDVDEVNQVLTTNLWLEMQWFDYRLMWDPGRWGKIRKLHVPVDQIWIPDILLYN 115
>UNIPROTKB|F1P718 [details] [associations]
symbol:CHRNA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087732 EMBL:AAEX03008991
Ensembl:ENSCAFT00000002737 Uniprot:F1P718
Length = 375
Score = 778 (278.9 bits), Expect = 2.7e-77, P = 2.7e-77
Identities = 146/290 (50%), Positives = 195/290 (67%)
Query: 96 MTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAI 155
MTTNVW+ QEW D KL+W P +YGG+ + VPS+ +W PDIVL++NADG +E T TKA+
Sbjct: 1 MTTNVWLKQEWTDVKLRWRPGDYGGIKVIRVPSDSLWTPDIVLFDNADGRFEGT-STKAV 59
Query: 156 LHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSDK 215
+ YDG V W PPA YKS C IDV +FPFDVQ C MKFGSWTYDG VD+ IL+ D DK
Sbjct: 60 VRYDGTVTWTPPANYKSSCTIDVTFFPFDVQNCSMKFGSWTYDGSQVDI--ILEDQDVDK 117
Query: 216 IDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLIIP 275
+D++ + EW+I+ R + S C PY + ++ ++R LFYT+ LIIP
Sbjct: 118 -------RDFFDNGEWEIVSATGSRGNRTDSACWYPY--VTYSFVIKRLPLFYTLFLIIP 168
Query: 276 CVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLFT 335
C+G+SFL+VLVFYLPS+ GEK+ LC EIIP +S +PL+G+YL+FT
Sbjct: 169 CIGLSFLTVLVFYLPSNEGEKICLCTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLVFT 228
Query: 336 MILVTLSVVVTIAVLNVNFRSPVTH-VMKPWVHKVFIEVLPKILFIQRPA 384
MI VTLS++VT+ +N++ RS TH M PWV K+F+ LPK+L ++ A
Sbjct: 229 MIFVTLSIMVTVFAINIHHRSSSTHDAMAPWVRKIFLHKLPKVLCMRSHA 278
Score = 134 (52.2 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 21/45 (46%), Positives = 31/45 (68%)
Query: 511 LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+ T + QEW D KL+W P +YGG+ + VPS+ +W PDIVL++
Sbjct: 1 MTTNVWLKQEWTDVKLRWRPGDYGGIKVIRVPSDSLWTPDIVLFD 45
>FB|FBgn0000038 [details] [associations]
symbol:nAcRbeta-64B "nicotinic Acetylcholine Receptor beta
64B" species:7227 "Drosophila melanogaster" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISS] [GO:0005892 "acetylcholine-gated channel complex"
evidence=ISS] [GO:0005887 "integral to plasma membrane"
evidence=NAS] [GO:0006811 "ion transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IDA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 EMBL:AE014296 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889 KO:K05312
GO:GO:0005892 eggNOG:NOG267576 EMBL:X04016 EMBL:X07956 EMBL:X07957
EMBL:X07958 EMBL:M20316 PIR:S03012 RefSeq:NP_523927.2
UniGene:Dm.2738 ProteinModelPortal:P04755 SMR:P04755 STRING:P04755
PRIDE:P04755 GeneID:38545 KEGG:dme:Dmel_CG11348 CTD:38545
FlyBase:FBgn0000038 InParanoid:P04755 OrthoDB:EOG47M0D2
ChiTaRS:nAcRbeta-64B GenomeRNAi:38545 NextBio:809206 Bgee:P04755
GermOnline:CG11348 Uniprot:P04755
Length = 521
Score = 766 (274.7 bits), Expect = 5.0e-76, P = 5.0e-76
Identities = 152/336 (45%), Positives = 213/336 (63%)
Query: 48 RLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWE 107
RL+R + +KL ++ ++Q + V + +N N KNQ+M +NVW+ W
Sbjct: 30 RLVRDLFRGYNKL-IRPVQNMTQKVGVRFGLAFVQL---INVNEKNQVMKSNVWLRLVWY 85
Query: 108 DYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPP 167
DY+L+W +YGG+ L +P + +W PDIVL+NNADGNYEV + +++ G+V+W PP
Sbjct: 86 DYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPTGEVLWVPP 145
Query: 168 AIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYL 227
AIY+S C IDV YFPFD QTC+MKFGSWT++G V L + + +DL DY+
Sbjct: 146 AIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSLA-LYNNKNF------VDLSDYWK 198
Query: 228 SVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVF 287
S WDI++VPA N DI F I +RRKTLFYTVNLI+P V ISFL VLVF
Sbjct: 199 SGTWDIIEVPAYLNVYEGDSNHPTETDITFYIIIRRKTLFYTVNLILPTVLISFLCVLVF 258
Query: 288 YLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTI 347
YLP+++GEKV+L ++I+PPTSL +PL+ KYLLFT I+ T+S++VT+
Sbjct: 259 YLPAEAGEKVTLGISILLSLVVFLLLVSKILPPTSLVLPLIAKYLLFTFIMNTVSILVTV 318
Query: 348 AVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
++N NFR P TH M ++ +F+ LP LF++RP
Sbjct: 319 IIINWNFRGPRTHRMPMYIRSIFLHYLPAFLFMKRP 354
Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
Identities = 89/186 (47%), Positives = 122/186 (65%)
Query: 19 LTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKN 78
L + FS++ A ++E RL DL YN+LIRPV N + K+ V+ GL QLI VN KN
Sbjct: 14 LVLVAFSLVSASEDEE--RLVRDLFRGYNKLIRPVQNMTQKVGVRFGLAFVQLINVNEKN 71
Query: 79 QIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVL 138
Q+M +NVW+ +++ W DY+L+W +YGG+ L +P + +W PDIVL
Sbjct: 72 QVMKSNVWL------RLV---------WYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVL 116
Query: 139 YNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYD 198
+NNADGNYEV + +++ G+V+W PPAIY+S C IDV YFPFD QTC+MKFGSWT++
Sbjct: 117 FNNADGNYEVRYKSNVLIYPTGEVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFN 176
Query: 199 GYTVDL 204
G V L
Sbjct: 177 GDQVSL 182
Score = 118 (46.6 bits), Expect = 0.00092, P = 0.00092
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 521 WEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
W DY+L+W +YGG+ L +P + +W PDIVL+N
Sbjct: 84 WYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFN 118
>WB|WBGene00006765 [details] [associations]
symbol:unc-29 species:6239 "Caenorhabditis elegans"
[GO:0045211 "postsynaptic membrane" evidence=IEA;IDA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0040011
"locomotion" evidence=IMP] [GO:0046662 "regulation of oviposition"
evidence=IMP] [GO:0007274 "neuromuscular synaptic transmission"
evidence=IDA] [GO:0043051 "regulation of pharyngeal pumping"
evidence=IGI] [GO:0045202 "synapse" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0043005 "neuron projection"
evidence=IDA] [GO:0015464 "acetylcholine receptor activity"
evidence=IDA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0043025 GO:GO:0007274
GO:GO:0043005 GO:GO:0040011 GO:GO:0004889 HOGENOM:HOG000006756
GeneTree:ENSGT00630000089708 KO:K05312 EMBL:X83888 EMBL:U81144
EMBL:Z80220 PIR:S68587 PIR:T24695 RefSeq:NP_492399.1
ProteinModelPortal:P48181 SMR:P48181 MINT:MINT-3383569
STRING:P48181 PaxDb:P48181 EnsemblMetazoa:T08G11.5.1
EnsemblMetazoa:T08G11.5.2 GeneID:172703 KEGG:cel:CELE_T08G11.5
UCSC:T08G11.5 CTD:172703 WormBase:T08G11.5 eggNOG:NOG267576
InParanoid:P48181 OMA:NETSAYY NextBio:876657 GO:GO:0015464
GO:GO:0046662 GO:GO:0043051 Uniprot:P48181
Length = 493
Score = 757 (271.5 bits), Expect = 4.5e-75, P = 4.5e-75
Identities = 156/368 (42%), Positives = 230/368 (62%)
Query: 19 LTFLVFSVII--AQGNDEAKRLYDDLLSNYNRLIRPVGNNSD-KLTVKMGLKLSQLIEVN 75
L+ ++F VII +D+ +RL D+ YN LI+PV N+S+ L VKM L+L LI V+
Sbjct: 12 LSVVIFLVIINTINASDDEERLMVDVFRGYNSLIQPVRNSSELPLIVKMALQLVLLINVD 71
Query: 76 LKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPD 135
K+Q+M TNVW+ +W D+++KW+P YG + + V + +WLPD
Sbjct: 72 EKDQVMHTNVWLTL---------------QWHDFQMKWNPVNYGEIKQIRVSPDKVWLPD 116
Query: 136 IVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSW 195
IVL+NNADGNYEV+ M ++++ G ++W PPAIYKS C IDVE+FPFD Q C + FGSW
Sbjct: 117 IVLFNNADGNYEVSFMCNVVINHKGDMLWVPPAIYKSSCIIDVEFFPFDEQVCTLVFGSW 176
Query: 196 TYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDI 255
TY+ + L+ + + ++ +D+ +Y S WD++ VPA K I
Sbjct: 177 TYNENEIKLEFV-------QAEL-VDVSEYSASSIWDVIDVPASLVNK--------RSRI 220
Query: 256 IFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXA 315
F + +RRKTLFYTV LIIP V ++FLS+ VF+LP+DSGEK++L +
Sbjct: 221 EFQVRIRRKTLFYTVVLIIPTVLMAFLSMAVFFLPTDSGEKITLTISVLLSIVVFLLLVS 280
Query: 316 EIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLP 375
+I+PPTS T+PL+ KYLL T +L ++++VT+ ++NV FR P TH M WV VF++ LP
Sbjct: 281 KILPPTSSTIPLMAKYLLLTFVLNVITILVTVIIINVYFRGPRTHRMPQWVRVVFLQFLP 340
Query: 376 KILFIQRP 383
K++ ++RP
Sbjct: 341 KLVCMKRP 348
>WB|WBGene00000042 [details] [associations]
symbol:acr-2 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA;IDA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA;IDA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0043005
"neuron projection" evidence=IDA] [GO:0015464 "acetylcholine
receptor activity" evidence=ISS] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0043005 GO:GO:0004889 HOGENOM:HOG000006756
GeneTree:ENSGT00630000089708 KO:K05312 eggNOG:NOG267576
GO:GO:0015464 TCDB:1.A.9.1.2 EMBL:X86403 EMBL:FO081325 PIR:S57648
RefSeq:NP_509128.1 UniGene:Cel.18149 ProteinModelPortal:P48182
SMR:P48182 PaxDb:P48182 EnsemblMetazoa:K11G12.2 GeneID:180936
KEGG:cel:CELE_K11G12.2 UCSC:K11G12.2 CTD:180936 WormBase:K11G12.2
InParanoid:P48182 OMA:ENCSKWK NextBio:911638 Uniprot:P48182
Length = 575
Score = 756 (271.2 bits), Expect = 5.7e-75, P = 5.7e-75
Identities = 164/375 (43%), Positives = 219/375 (58%)
Query: 31 GNDEAKRLYDDLLSNYNRLIRPVGN-NSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQ 89
G DE RL DL YN LIRPV N +S + V G+ + LI V+ KNQI+ TNVW+
Sbjct: 57 GEDE-DRLVIDLFREYNFLIRPVKNVSSPPVVVDFGVAMILLINVDEKNQILQTNVWLTM 115
Query: 90 NLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVT 149
+W D++L W+P EYG + LHVPS+ +WLPDIVL+NNADGNYEV+
Sbjct: 116 ---------------KWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVLFNNADGNYEVS 160
Query: 150 IMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQ 209
+ + + G V W PPA++KS C IDVE+FPFD Q C + FGSWTY+ V L H
Sbjct: 161 FKSNVFVDHHGDVTWVPPAMFKSSCRIDVEWFPFDEQCCTLVFGSWTYNSEEVRL-HWYN 219
Query: 210 GPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYT 269
+ + L DY S WD++ VP K +E ++FN+ +RRKTLFYT
Sbjct: 220 NIQA------VQLHDYSYSGIWDVIDVPGQLVHK--PDLKEN--KMVFNVVIRRKTLFYT 269
Query: 270 VNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLG 329
V LIIP V ++FLSV+ FYLP DSGEKVSL ++I+PPTS +PL+G
Sbjct: 270 VILIIPTVLMAFLSVMAFYLPVDSGEKVSLTISLLLALVVFLLLVSKILPPTS-NIPLMG 328
Query: 330 KYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRPAXXXXX 389
KYLL +L +VV T+ ++N+ FRS ++H M WV KVF+E LP +L ++RP
Sbjct: 329 KYLLLAFVLNITAVVGTVVIVNIYFRSALSHKMPTWVRKVFLEFLPHLLVMKRPERIPIF 388
Query: 390 XXXXXXXGVLTEVFD 404
+E+FD
Sbjct: 389 NGYFVEEYCASEIFD 403
Score = 148 (57.2 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 511 LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
L T + +W D++L W+P EYG + LHVPS+ +WLPDIVL+N
Sbjct: 107 LQTNVWLTMKWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVLFN 151
>WB|WBGene00000045 [details] [associations]
symbol:acr-6 species:6239 "Caenorhabditis elegans"
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0004889 HOGENOM:HOG000006756
GeneTree:ENSGT00630000089708 EMBL:FO081700 RefSeq:NP_491354.2
ProteinModelPortal:Q9N4M3 SMR:Q9N4M3 EnsemblMetazoa:ZK973.5
GeneID:191479 KEGG:cel:CELE_ZK973.5 UCSC:ZK973.5 CTD:191479
WormBase:ZK973.5 eggNOG:NOG327967 OMA:NYQESVE NextBio:949304
Uniprot:Q9N4M3
Length = 551
Score = 756 (271.2 bits), Expect = 5.7e-75, P = 5.7e-75
Identities = 151/382 (39%), Positives = 236/382 (61%)
Query: 14 VLFPSLTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIE 73
+LF L L+FS+ + K L++ LL+ YN++ P G ++ LT++ L+L Q+++
Sbjct: 1 MLF-RLILLLFSIRLCSFT-AYKSLFETLLARYNKIAFPSGEFNNTLTIEFKLRLDQIVD 58
Query: 74 VNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWL 133
V+ K+Q++T LK ++ W DY+L W+P+E+G + +H P E +WL
Sbjct: 59 VHEKDQVIT--------LKGTLI-------HHWLDYRLSWNPDEFGNITLMHFPGEMLWL 103
Query: 134 PDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFG 193
PDI+LYNNA G+ V+ T+ + ++G+V W PP +Y +FC ID+E++P+D+Q C +KFG
Sbjct: 104 PDIILYNNAHGSPWVSETTQVHVSFEGRVTWQPPVVYDAFCNIDIEWYPYDLQICELKFG 163
Query: 194 SWTYDGYTVDLKHIL--QGPDSD--------KIDIGIDLQDYYLSVEWDIMKVPAVRNEK 243
SWTY G ++L H+ Q +S K++ G+DL +Y SVEWD++ V +R++K
Sbjct: 164 SWTYGGSQLNLIHLTTDQANESTDATGDNVWKVERGVDLSNYQESVEWDLLSVEGIRHKK 223
Query: 244 FYSCCEEPYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXX 303
+Y CC+ P DI + + +RRK LFYTVN+IIPCV ++ +++ VFYLP +S +K+ LC
Sbjct: 224 WYPCCDYPSIDITYYLHIRRKKLFYTVNMIIPCVCLASMTLWVFYLPCESHQKIQLCISV 283
Query: 304 XXXXXXXXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRS---PVTH 360
+IIPPTS+ PL+ KYL FTMI+V LSV T+ + N+++R+ P+
Sbjct: 284 LVALTLYFLMLIDIIPPTSIVTPLILKYLSFTMIMVALSVTCTVFIQNIHYRAYYQPMPR 343
Query: 361 VMKPWVHKVFIEVLPKILFIQR 382
+K W FIE L K L I R
Sbjct: 344 FVKHW----FIEKLGKKLLISR 361
Score = 148 (57.2 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 492 LPYELPSKLARLASIHFCDLLTPIN--FLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLP 549
L E +L ++ +H D + + + W DY+L W+P+E+G + +H P E +WLP
Sbjct: 45 LTIEFKLRLDQIVDVHEKDQVITLKGTLIHHWLDYRLSWNPDEFGNITLMHFPGEMLWLP 104
Query: 550 DIVLYN 555
DI+LYN
Sbjct: 105 DIILYN 110
>UNIPROTKB|F1PNA0 [details] [associations]
symbol:CHRNA6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087732 EMBL:AAEX03010368
Ensembl:ENSCAFT00000008776 Uniprot:F1PNA0
Length = 395
Score = 750 (269.1 bits), Expect = 2.5e-74, P = 2.5e-74
Identities = 136/267 (50%), Positives = 188/267 (70%)
Query: 117 EYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEI 176
EY G++TL VP++ IW PDIVLYNNA G+++V TKA+L YDG ++W PPAI+KS C +
Sbjct: 2 EYDGIETLRVPADRIWKPDIVLYNNAVGDFQVEGKTKALLKYDGMIIWTPPAIFKSSCPM 61
Query: 177 DVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKV 236
D+ +FPFD Q C +KFGSWTYD +DL ++ G +D+ D++ + EW+I+
Sbjct: 62 DITFFPFDHQNCSLKFGSWTYDKAEIDL--LIIGSK-------VDMNDFWENSEWEIVDA 112
Query: 237 PAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEK 296
+++ Y+CCEE Y DI ++ +RR +FYT+NLIIPC+ ISFL+VLVFYLPSD GEK
Sbjct: 113 SGYKHDIKYNCCEEIYTDITYSFYIRRLPMFYTINLIIPCLFISFLTVLVFYLPSDCGEK 172
Query: 297 VSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRS 356
V+LC E IP TSL +PL+G+YLLFTMI VTLS+ VT+ VLN+++R+
Sbjct: 173 VTLCISVLLSLTVFLLVITETIPSTSLVIPLVGEYLLFTMIFVTLSIAVTVFVLNIHYRT 232
Query: 357 PVTHVMKPWVHKVFIEVLPKILFIQRP 383
P TH M WV VF+++LP+IL ++RP
Sbjct: 233 PATHTMPKWVKTVFLQLLPQILMMRRP 259
>WB|WBGene00002974 [details] [associations]
symbol:lev-1 species:6239 "Caenorhabditis elegans"
[GO:0045211 "postsynaptic membrane" evidence=IEA;IDA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0040012
"regulation of locomotion" evidence=IMP] [GO:0034220 "ion
transmembrane transport" evidence=IMP] [GO:0046662 "regulation of
oviposition" evidence=IMP] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043005 "neuron projection" evidence=IDA]
[GO:0015464 "acetylcholine receptor activity" evidence=IMP]
[GO:0022848 "acetylcholine-gated cation channel activity"
evidence=IMP] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0043025 GO:GO:0043005
GO:GO:0040012 GO:GO:0004889 HOGENOM:HOG000006756
GeneTree:ENSGT00630000089708 GO:GO:0015464 GO:GO:0046662
GO:GO:0022848 EMBL:X98601 EMBL:X98246 EMBL:Z81093 PIR:T22910
RefSeq:NP_001255705.1 UniGene:Cel.19676 ProteinModelPortal:Q27218
SMR:Q27218 MINT:MINT-3383590 STRING:Q27218 EnsemblMetazoa:F09E8.7a
GeneID:178269 KEGG:cel:CELE_F09E8.7 UCSC:F09E8.7 CTD:178269
WormBase:F09E8.7a eggNOG:NOG311736 InParanoid:Q27218 OMA:STCEDID
NextBio:900440 ArrayExpress:Q27218 Uniprot:Q27218
Length = 507
Score = 739 (265.2 bits), Expect = 3.6e-73, P = 3.6e-73
Identities = 158/372 (42%), Positives = 221/372 (59%)
Query: 19 LTFLVFSVIIAQGN------DEAKRLYDDLLSNYNRLIRPVGNNSD-KLTVKMGLKLSQL 71
L FLVF + + + D RL DL YN L++PV N S+ + VK+G++L L
Sbjct: 16 LGFLVFLAVSLRNHSTCEDIDAEDRLMVDLFRGYNSLVQPVRNRSELPMIVKIGMQLVLL 75
Query: 72 IEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHI 131
I V+ K Q+M TNVW+ +W+D++LKW P +Y + + V E +
Sbjct: 76 INVDEKEQVMHTNVWLTM---------------KWDDFQLKWDPRDYANITQIRVAPEKV 120
Query: 132 WLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMK 191
WLPDIVL+NNADGNYEV+ M ++ G V+W PPAIYKS C IDVE+FPFD Q C +
Sbjct: 121 WLPDIVLFNNADGNYEVSFMCNVLILSTGTVLWVPPAIYKSSCIIDVEFFPFDDQLCSLT 180
Query: 192 FGSWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEP 251
FGSWTY+ + L + SD++D +Y S WD+M PAV
Sbjct: 181 FGSWTYNRDEIKLDFLT----SDRVDFS----EYSTSSIWDMMDGPAVLTSD-------- 224
Query: 252 YPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXX 311
I F I +RRKTLFYTV LI+P V ++FL+V VFYLP+ SGEK+ L
Sbjct: 225 RSRIEFQIRIRRKTLFYTVVLILPTVLMAFLNVTVFYLPTASGEKMGLTMNVLLSIVVFL 284
Query: 312 XXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFI 371
++I+PPTS ++PL+ KYLL T +L ++++VT + N+ FRSP+TH + PWV KVF+
Sbjct: 285 LLVSKILPPTSSSIPLVAKYLLLTFVLNIITIMVTTIICNIYFRSPITHRLPPWVRKVFL 344
Query: 372 EVLPKILFIQRP 383
++LP ++ +QRP
Sbjct: 345 DILPLLMCMQRP 356
Score = 122 (48.0 bits), Expect = 0.00032, P = 0.00032
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 513 TPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
T + +W+D++LKW P +Y + + V E +WLPDIVL+N
Sbjct: 87 TNVWLTMKWDDFQLKWDPRDYANITQIRVAPEKVWLPDIVLFN 129
>UNIPROTKB|Q9I8C7 [details] [associations]
symbol:CHRNA10 "Neuronal acetylcholine receptor subunit
alpha-10" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005262 "calcium channel activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0005262 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 EMBL:AJ295624 IPI:IPI00578800
RefSeq:NP_001094506.1 UniGene:Gga.47073 ProteinModelPortal:Q9I8C7
GeneID:430628 KEGG:gga:430628 CTD:57053 HOVERGEN:HBG003756
KO:K04811 NextBio:20830508 GO:GO:0004889 Uniprot:Q9I8C7
Length = 452
Score = 737 (264.5 bits), Expect = 5.9e-73, P = 5.9e-73
Identities = 148/374 (39%), Positives = 220/374 (58%)
Query: 7 PRTAAMHVLFPSLTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGL 66
P A + L + T L AQG A +L DL +NY+ +RP + L V + +
Sbjct: 5 PLPACLLALSLAGTVLAPGCGAAQGR-LAHKLLHDLFANYSSALRPAEDTERALNVTLQV 63
Query: 67 KLSQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHV 126
LSQ+I+++ +NQ++T+ +WV Q W D L W + YGG+D++ +
Sbjct: 64 TLSQIIDMDERNQVLTSYLWVRQ---------------AWLDAHLAWDKDAYGGIDSIRI 108
Query: 127 PSEHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQ 186
PS ++W PDIVLYNNAD + ++ T +L DG ++W+ PAI KS C++DV YFPFD Q
Sbjct: 109 PSSYVWRPDIVLYNNADERFGGSMETNVVLRSDGHIMWDSPAITKSSCKVDVSYFPFDGQ 168
Query: 187 TCVMKFGSWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYS 246
C + FGSWTY+G +DL+++L D G DL D+ +VEW+++ +PA RN Y
Sbjct: 169 QCRLTFGSWTYNGNQIDLRNLL--------DTG-DLTDFVENVEWEVLGMPATRNVVTYG 219
Query: 247 CCEEPYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXX 306
CC EPYPD+ + + LRR+ FY NL++PCV ISFL+ L FYLP+DSGEKVSL
Sbjct: 220 CCSEPYPDVTYTLLLRRRASFYIFNLLLPCVMISFLAPLGFYLPADSGEKVSLGVTVLLA 279
Query: 307 XXXXXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWV 366
AE +PP+ +VPL+GKY + TM ++T S +TI ++N++ P + PW
Sbjct: 280 LTVFQLLVAESMPPSE-SVPLIGKYYIATMTMITASTALTIFIMNIHHCGPGARPVPPWA 338
Query: 367 HKVFIEVLPKILFI 380
++ + L + L +
Sbjct: 339 RRLILHHLARALCV 352
Score = 126 (49.4 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 519 QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
Q W D L W + YGG+D++ +PS ++W PDIVLYN
Sbjct: 86 QAWLDAHLAWDKDAYGGIDSIRIPSSYVWRPDIVLYN 122
>ZFIN|ZDB-GENE-060503-725 [details] [associations]
symbol:chrna10 "cholinergic receptor, nicotinic,
alpha 10" species:7955 "Danio rerio" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 ZFIN:ZDB-GENE-060503-725 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 CTD:57053 HOVERGEN:HBG003756 GO:GO:0004889
eggNOG:NOG306809 HOGENOM:HOG000006756 GeneTree:ENSGT00630000089708
EMBL:BX072550 IPI:IPI00499462 RefSeq:NP_001038269.1
UniGene:Dr.74089 Ensembl:ENSDART00000012872 GeneID:556507
KEGG:dre:556507 InParanoid:Q1LY90 OMA:NAMESAD OrthoDB:EOG4J1189
NextBio:20881521 Uniprot:Q1LY90
Length = 527
Score = 734 (263.4 bits), Expect = 1.2e-72, P = 1.2e-72
Identities = 143/369 (38%), Positives = 225/369 (60%)
Query: 14 VLFPSLTFLVFSVIIAQGNDE--AKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQL 71
+L+ L S+++ G + A++L +DL +NY +RPV + D L V + + LSQ+
Sbjct: 2 ILYYILKQFFLSLLVCWGANGIYAQKLLNDLFNNYTSALRPVEDTEDILNVTLQITLSQI 61
Query: 72 IEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHI 131
I+++ +NQI+T +W+ Q VW+++ Y L W+ E Y G+DT+ +P ++
Sbjct: 62 IDMDERNQILTAYLWIRQ----------VWIDK----Y-LTWNKENYDGLDTIRIPGSYV 106
Query: 132 WLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMK 191
W PDIVLYN+AD ++ T+ T ++ +DG+++W+ PAI KS C++DV +FPFD Q C +
Sbjct: 107 WRPDIVLYNSADDHFTSTMDTNVVIRHDGQIMWDAPAITKSSCKVDVSFFPFDAQQCRLT 166
Query: 192 FGSWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEP 251
+GSWTY+G +D+ + ++ D DL D +VEW+++ +PA RN Y CC +P
Sbjct: 167 YGSWTYNGNQLDILNAMESADL------ADLVD---NVEWEVLGMPAKRNIILYGCCADP 217
Query: 252 YPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXX 311
YPD+ + + L+R+ FY NL+IPCV ISFL+ L FYLP+DSGEKVSL
Sbjct: 218 YPDVTYTLKLKRRASFYVFNLLIPCVMISFLAPLGFYLPADSGEKVSLGVTVMLALTVFQ 277
Query: 312 XXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFI 371
AEI+PP+ VPL+GKY + TM ++T S +TI V+N++ P + W K +
Sbjct: 278 LLVAEIMPPSE-NVPLIGKYYIATMTMITASTALTIFVMNIHHCGPDAKPVPDWAKKFIL 336
Query: 372 EVLPKILFI 380
+ L +I F+
Sbjct: 337 QYLARICFV 345
Score = 120 (47.3 bits), Expect = 0.00057, P = 0.00057
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 519 QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
Q W D L W+ E Y G+DT+ +P ++W PDIVLYN
Sbjct: 79 QVWIDKYLTWNKENYDGLDTIRIPGSYVWRPDIVLYN 115
>UNIPROTKB|Q9PTS8 [details] [associations]
symbol:CHRNA9 "Neuronal acetylcholine receptor subunit
alpha-9" species:9031 "Gallus gallus" [GO:0005262 "calcium channel
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0004889 "acetylcholine-activated cation-selective
channel activity" evidence=IEA] [GO:0007204 "elevation of cytosolic
calcium ion concentration" evidence=IEA] [GO:0042472 "inner ear
morphogenesis" evidence=IEA] [GO:0050910 "detection of mechanical
stimulus involved in sensory perception of sound" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0005262 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
eggNOG:NOG306809 HOGENOM:HOG000006756 GO:GO:0007204
GeneTree:ENSGT00630000089708 EMBL:AF082192 IPI:IPI00593177
RefSeq:NP_990091.1 UniGene:Gga.283 ProteinModelPortal:Q9PTS8
PRIDE:Q9PTS8 Ensembl:ENSGALT00000023080 GeneID:395522
KEGG:gga:395522 CTD:55584 InParanoid:Q9PTS8 KO:K04810 OMA:QWARVVI
OrthoDB:EOG470TH4 NextBio:20815600 Uniprot:Q9PTS8
Length = 484
Score = 729 (261.7 bits), Expect = 4.1e-72, P = 4.1e-72
Identities = 145/365 (39%), Positives = 215/365 (58%)
Query: 21 FLVFSVIIAQGNDEAK-----RLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVN 75
+L+F+ + Q + AK L+++L +Y+ +RPV + L V + + LSQ+ +++
Sbjct: 14 WLLFTATMLQAVESAKGKYAQMLFNELFEDYSNALRPVEDTDKVLNVTLQITLSQIKDMD 73
Query: 76 LKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPD 135
+NQI+T +W+ Q+ W D LKW ++Y G+D++ +PS +W PD
Sbjct: 74 ERNQILTAYLWIRQS---------------WYDAYLKWDKDKYDGLDSIRIPSNLVWRPD 118
Query: 136 IVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSW 195
IVLYN AD ++ + T +L YDGK+ W+ PAI KS C +DV YFPFD Q C + FGSW
Sbjct: 119 IVLYNKADDDFSEPVNTNVVLRYDGKITWDAPAITKSSCVVDVSYFPFDSQQCNLTFGSW 178
Query: 196 TYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDI 255
TY+G VD+ + +D G DL D+ VEW+I +PAV+N Y CC EPYPD+
Sbjct: 179 TYNGNQVDI--------INSLDSG-DLSDFVEDVEWEIHGMPAVKNVITYGCCSEPYPDV 229
Query: 256 IFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXA 315
F + L+RK+ FY NL++PC+ ISFL+ L FYLP+DSGEKVSL A
Sbjct: 230 TFTLILKRKSSFYIFNLLLPCILISFLAPLGFYLPADSGEKVSLGVTVLLALTVFQLMVA 289
Query: 316 EIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLP 375
EI+PP+ VPL+GKY + TM ++T S +TI ++NV+ + W V ++ +
Sbjct: 290 EIMPPSE-NVPLIGKYYIATMTMITASTALTIIIMNVHHCGSEAKPVPQWARVVILDYMS 348
Query: 376 KILFI 380
KI F+
Sbjct: 349 KIFFV 353
Score = 121 (47.7 bits), Expect = 0.00039, P = 0.00039
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 519 QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
Q W D LKW ++Y G+D++ +PS +W PDIVLYN
Sbjct: 87 QSWYDAYLKWDKDKYDGLDSIRIPSNLVWRPDIVLYN 123
>UNIPROTKB|F1MDD1 [details] [associations]
symbol:CHRNA9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050910 "detection of mechanical stimulus involved in
sensory perception of sound" evidence=IEA] [GO:0042472 "inner ear
morphogenesis" evidence=IEA] [GO:0007204 "elevation of cytosolic
calcium ion concentration" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0042472 GO:GO:0004889 GO:GO:0050910
GO:GO:0007204 GeneTree:ENSGT00630000089708 CTD:55584 KO:K04810
OMA:CAQYKVL EMBL:DAAA02017486 IPI:IPI00691377 RefSeq:NP_001179475.1
UniGene:Bt.106486 ProteinModelPortal:F1MDD1
Ensembl:ENSBTAT00000039651 GeneID:521876 KEGG:bta:521876
NextBio:20873389 Uniprot:F1MDD1
Length = 479
Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
Identities = 149/374 (39%), Positives = 215/374 (57%)
Query: 35 AKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQ 94
A++L++DL +Y+ +RPV + L V + + LSQ+ +++ +NQI+T +W+ Q
Sbjct: 31 AQKLFNDLFEDYSNALRPVEDTDKVLNVTLQITLSQIKDMDERNQILTAYLWIRQI---- 86
Query: 95 IMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKA 154
W D L W ++Y G+D++ +PS+ +W PDIVLYN AD + T
Sbjct: 87 -----------WHDAYLTWDRDQYDGLDSIRIPSDLVWRPDIVLYNKADDESSEPVNTNV 135
Query: 155 ILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSD 214
+L YDG + W+ PAI KS C +DV YFPFD Q C + FGSWTY+G VD+ + L
Sbjct: 136 VLRYDGLITWDAPAITKSSCVVDVTYFPFDNQQCNLTFGSWTYNGNQVDIFNAL------ 189
Query: 215 KIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLII 274
D G DL D+ VEW++ +PAV+N Y CC EPYPD+ F + L+R++ FY VNL+I
Sbjct: 190 --DSG-DLSDFIEDVEWEVHGMPAVKNVISYGCCSEPYPDVTFTLLLKRRSSFYIVNLLI 246
Query: 275 PCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLF 334
PCV ISFL+ L FYLP+ SGEKVSL AEI+P S VPL+GKY +
Sbjct: 247 PCVLISFLAPLSFYLPAASGEKVSLGVTILLAMTVFQLMVAEIMP-ASENVPLIGKYYIA 305
Query: 335 TMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRPAXXXXXXXXXX 394
TM L+T S +TI V+N++F + PW V ++ + +ILF+
Sbjct: 306 TMALITASTALTIMVMNIHFCGAEARPVPPWARVVILKYMSRILFVYDVGESCLSPHQDR 365
Query: 395 XXGVLTEVFD-VPD 407
LT+V+D +P+
Sbjct: 366 ERDRLTKVYDKLPE 379
>ZFIN|ZDB-GENE-060811-1 [details] [associations]
symbol:chrnb1l "cholinergic receptor, nicotinic, beta
1 (muscle) like" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0004889 "acetylcholine-activated cation-selective
channel activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 ZFIN:ZDB-GENE-060811-1 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0004889 GeneTree:ENSGT00620000087691
EMBL:BX649313 IPI:IPI01024588 ProteinModelPortal:F8W4S9
Ensembl:ENSDART00000149144 Bgee:F8W4S9 Uniprot:F8W4S9
Length = 489
Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
Identities = 141/356 (39%), Positives = 214/356 (60%)
Query: 28 IAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWV 87
+ + ++ +RL +DL +YN +RP ++++ V++G+ L QLI +N KN MTTNV++
Sbjct: 16 LTEASEAERRLLEDLFQDYNLKVRPARTWNERVMVRVGMTLVQLISLNQKNGEMTTNVFM 75
Query: 88 NQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYE 147
N EW DY+L W+PE+Y +D + +P +W PDI L NN DG ++
Sbjct: 76 NM---------------EWTDYRLSWNPEDYDKIDVVRIPPVKVWRPDIYLINNNDGQFD 120
Query: 148 VTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHI 207
V + ++ DG V W PPAIY+S C I+V YFPFD Q C M F S+TYD VDL++
Sbjct: 121 VALYVNVLVRSDGTVSWLPPAIYRSSCSIEVAYFPFDWQNCSMVFRSYTYDSSEVDLQYG 180
Query: 208 LQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLF 267
L ++ +I ID + + EW I P+ +N + ++ Y DI F + + RK LF
Sbjct: 181 LDEDGNELHEIVIDENAFTENGEWQICHKPSRKNVQ-----DDLYEDITFYLIIERKPLF 235
Query: 268 YTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPL 327
Y +N+I+PC+ S L++ VFYLP +GEK++L A+ +P TSL +P+
Sbjct: 236 YVINIIVPCILTSVLAIFVFYLPPGAGEKMTLSISVLIALTVFMLLLADKVPETSLAIPI 295
Query: 328 LGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
+ Y++FTMILVT SV++++ VLN++ R+P TH M WV KVFI +LP+ L + RP
Sbjct: 296 IVNYVMFTMILVTFSVILSVVVLNLHHRTPSTHHMPGWVRKVFINLLPRYLGVLRP 351
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 27/78 (34%), Positives = 42/78 (53%)
Query: 483 LMPRPL-TW--RLPYELPSKLARLASIHFC--DLLTPINFLQEWEDYKLKWSPEEYGGVD 537
L RP TW R+ + L +L S++ ++ T + EW DY+L W+PE+Y +D
Sbjct: 36 LKVRPARTWNERVMVRVGMTLVQLISLNQKNGEMTTNVFMNMEWTDYRLSWNPEDYDKID 95
Query: 538 TLHVPSEHIWLPDIVLYN 555
+ +P +W PDI L N
Sbjct: 96 VVRIPPVKVWRPDIYLIN 113
>UNIPROTKB|Q9UGM1 [details] [associations]
symbol:CHRNA9 "Neuronal acetylcholine receptor subunit
alpha-9" species:9606 "Homo sapiens" [GO:0005262 "calcium channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005892 "acetylcholine-gated channel
complex" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0050910 "detection of mechanical stimulus
involved in sensory perception of sound" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0007204 "elevation of
cytosolic calcium ion concentration" evidence=IGI] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] Reactome:REACT_13685 InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0005886 GO:GO:0007268
GO:GO:0005262 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0042472 HOVERGEN:HBG003756 GO:GO:0004889
eggNOG:NOG306809 HOGENOM:HOG000006756 DrugBank:DB00184
GO:GO:0050910 GO:GO:0007204 GO:GO:0005892 CTD:55584 KO:K04810
OrthoDB:EOG470TH4 EMBL:AJ243342 EMBL:AY123244 EMBL:AC118275
EMBL:BC113549 EMBL:BC113575 EMBL:AF227732 IPI:IPI00005432
RefSeq:NP_060051.2 UniGene:Hs.272278 ProteinModelPortal:Q9UGM1
SMR:Q9UGM1 STRING:Q9UGM1 PhosphoSite:Q9UGM1 DMDM:308153406
PRIDE:Q9UGM1 DNASU:55584 Ensembl:ENST00000310169 GeneID:55584
KEGG:hsa:55584 UCSC:uc003gva.1 GeneCards:GC04P040337
H-InvDB:HIX0031380 HGNC:HGNC:14079 MIM:605116 neXtProt:NX_Q9UGM1
PharmGKB:PA26493 InParanoid:Q9UGM1 OMA:CAQYKVL PhylomeDB:Q9UGM1
BindingDB:Q9UGM1 ChEMBL:CHEMBL2184 GenomeRNAi:55584 NextBio:60096
Bgee:Q9UGM1 CleanEx:HS_CHRNA9 Genevestigator:Q9UGM1
GermOnline:ENSG00000174343 Uniprot:Q9UGM1
Length = 479
Score = 710 (255.0 bits), Expect = 4.3e-70, P = 4.3e-70
Identities = 142/346 (41%), Positives = 205/346 (59%)
Query: 35 AKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQ 94
A++L++DL +Y+ +RPV + L V + + LSQ+ +++ +NQI+T +W+ Q
Sbjct: 31 AQKLFNDLFEDYSNALRPVEDTDKVLNVTLQITLSQIKDMDERNQILTAYLWIRQI---- 86
Query: 95 IMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKA 154
W D L W ++Y G+D++ +PS+ +W PDIVLYN AD + T
Sbjct: 87 -----------WHDAYLTWDRDQYDGLDSIRIPSDLVWRPDIVLYNKADDESSEPVNTNV 135
Query: 155 ILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSD 214
+L YDG + W+ PAI KS C +DV YFPFD Q C + FGSWTY+G VD+ + L
Sbjct: 136 VLRYDGLITWDAPAITKSSCVVDVTYFPFDNQQCNLTFGSWTYNGNQVDIFNAL------ 189
Query: 215 KIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLII 274
D G DL D+ VEW++ +PAV+N Y CC EPYPD+ F + L+R++ FY VNL+I
Sbjct: 190 --DSG-DLSDFIEDVEWEVHGMPAVKNVISYGCCSEPYPDVTFTLLLKRRSSFYIVNLLI 246
Query: 275 PCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLF 334
PCV ISFL+ L FYLP+ SGEKVSL AEI+P S VPL+GKY +
Sbjct: 247 PCVLISFLAPLSFYLPAASGEKVSLGVTILLAMTVFQLMVAEIMP-ASENVPLIGKYYIA 305
Query: 335 TMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFI 380
TM L+T S +TI V+N++F + W V ++ + ++LF+
Sbjct: 306 TMALITASTALTIMVMNIHFCGAEARPVPHWARVVILKYMSRVLFV 351
>FB|FBgn0086778 [details] [associations]
symbol:gfA "giant fibre A" species:7227 "Drosophila
melanogaster" [GO:0007630 "jump response" evidence=IMP] [GO:0007268
"synaptic transmission" evidence=IMP] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISS;NAS] [GO:0005892 "acetylcholine-gated channel complex"
evidence=ISS;NAS] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IMP] [GO:0007632 "visual
behavior" evidence=IMP] [GO:0030425 "dendrite" evidence=IDA]
[GO:0043197 "dendritic spine" evidence=IDA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 EMBL:AE014298 GO:GO:0043197
GO:GO:0060079 GO:GO:0004889 GeneTree:ENSGT00630000089708
GO:GO:0005892 OMA:AGPPATN GO:GO:0007632 ChiTaRS:GFPT1 GO:GO:0007630
RefSeq:NP_001162795.1 UniGene:Dm.17283 ProteinModelPortal:E1JJR2
SMR:E1JJR2 EnsemblMetazoa:FBtr0301835 GeneID:32928
KEGG:dme:Dmel_CG32538 CTD:32928 FlyBase:FBgn0086778
PhylomeDB:E1JJR2 GenomeRNAi:32928 NextBio:781075 Bgee:E1JJR2
Uniprot:E1JJR2
Length = 564
Score = 706 (253.6 bits), Expect = 1.1e-69, P = 1.1e-69
Identities = 133/292 (45%), Positives = 185/292 (63%)
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
KNQ++ TN+W+ EW D L+W+ E+GGV L +P +W PD+++YN+AD ++ T
Sbjct: 103 KNQLLITNIWLKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYA 162
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
T ++ +G ++ PP I+KS C+ID+ +FPFD Q C MKFGSWTYDG+ +DL+ LQ
Sbjct: 163 TNVVVRNNGSCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQ--LQD- 219
Query: 212 DSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVN 271
+ G D+ + + EWD++ VP RNE +Y+CC EPY DI F I +RRKTL+Y N
Sbjct: 220 -----EAGGDISSFITNGEWDLLGVPGKRNEIYYNCCPEPYIDITFAILIRRKTLYYFFN 274
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
LI+PCV I+ +++L F LP DSGEK+SL AE +P TS VPLLG Y
Sbjct: 275 LIVPCVLIASMALLGFTLPPDSGEKLSLGVTILLSLTVFLNMVAETMPATSDAVPLLGTY 334
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
M +V SVV TI +LN + R+P TH M W+ +F+ LP IL +QRP
Sbjct: 335 FNCIMFMVASSVVSTILILNYHHRNPDTHEMSEWIRVIFLYWLPCILRMQRP 386
Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 86/201 (42%), Positives = 118/201 (58%)
Query: 6 PPRTA-AMHVLFPSLTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKM 64
P TA +L L L+ A G E KRL LL NYN L RPV N SD L +
Sbjct: 32 PEATANGGRMLVYGLGLLIMIPACAAGPHE-KRLLHALLDNYNSLERPVVNESDPLQLSF 90
Query: 65 GLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTL 124
GL L Q+I+V+ KNQ++ TN+W LK EW D L+W+ E+GGV L
Sbjct: 91 GLTLMQIIDVDEKNQLLITNIW----LK-----------LEWNDMNLRWNSSEFGGVRDL 135
Query: 125 HVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFD 184
+P +W PD+++YN+AD ++ T T ++ +G ++ PP I+KS C+ID+ +FPFD
Sbjct: 136 RIPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGSCLYVPPGIFKSTCKIDITWFPFD 195
Query: 185 VQTCVMKFGSWTYDGYTVDLK 205
Q C MKFGSWTYDG+ +DL+
Sbjct: 196 DQRCEMKFGSWTYDGFQLDLQ 216
Score = 120 (47.3 bits), Expect = 0.00062, P = 0.00062
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 511 LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
L+T I EW D L+W+ E+GGV L +P +W PD+++YN
Sbjct: 107 LITNIWLKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYN 151
>WB|WBGene00002975 [details] [associations]
symbol:lev-8 species:6239 "Caenorhabditis elegans"
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 HSSP:P02711
GO:GO:0004889 HOGENOM:HOG000006756 GeneTree:ENSGT00630000089708
EMBL:Z78417 PIR:T19748 RefSeq:NP_509932.2 ProteinModelPortal:Q93329
SMR:Q93329 MINT:MINT-3383701 STRING:Q93329 EnsemblMetazoa:C35C5.5
GeneID:191600 KEGG:cel:CELE_C35C5.5 CTD:191600 WormBase:C35C5.5
eggNOG:NOG300335 InParanoid:Q93329 OMA:LAKIDHH NextBio:949628
Uniprot:Q93329
Length = 531
Score = 706 (253.6 bits), Expect = 1.1e-69, P = 1.1e-69
Identities = 141/376 (37%), Positives = 227/376 (60%)
Query: 19 LTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKN 78
L + ++ N +L ++LL++YN+ +RPV N SD L VK G L +LI+V+
Sbjct: 13 LVIFILHIVTINANKHVSQLLENLLTDYNKAVRPVHNASDALKVKFGANLCRLIDVD--- 69
Query: 79 QIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVL 138
++ NQ++TT++W+ +W D KL W+P ++GGV+ +H+PS+ IW+PDIVL
Sbjct: 70 EV------------NQVLTTSLWLEMQWYDKKLTWNPTDWGGVEYIHIPSDQIWIPDIVL 117
Query: 139 YNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYD 198
YNNADG +TI + A + + G+VVW PP+IYKSFC I+++YFP+D QTC MKFG W+ D
Sbjct: 118 YNNADGEPHITITSLAKIDHHGRVVWQPPSIYKSFCPINIKYFPYDWQTCEMKFGGWSND 177
Query: 199 GYTVDLKHILQGPDS--------DKIDI-----GIDLQDYYLSVEWDIMKVPAVRNEKFY 245
G T+DL I D D ++ G+ L Y+ S EWD++ + R + Y
Sbjct: 178 GETLDLYQIPVDVDDIPQVKRQDDGVEFLYLEKGLGLSFYHESAEWDLLSATSSRYAQIY 237
Query: 246 -SCC-EEPYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFY-LPSDSGEKVSLCXX 302
CC ++ Y DI + I +RRK +F+TV L IPC+ I+ ++ VF LP++ K++
Sbjct: 238 PGCCGQQYYIDIKYRIIIRRKAIFFTVTLTIPCMLIANVTPFVFLILPNE--HKMTYSIS 295
Query: 303 XXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVM 362
++IPPTSL++ L+G YLLFT+++V++S+++++ +N+ + + M
Sbjct: 296 VLVAFSVFYLVLIDLIPPTSLSLSLIGIYLLFTLLMVSVSIILSVVTINMYRKQAFSSGM 355
Query: 363 KPWVHKVFIEVLPKIL 378
W +F++ LPK+L
Sbjct: 356 SHWQRWLFVQRLPKLL 371
Score = 148 (57.2 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 28/66 (42%), Positives = 44/66 (66%)
Query: 492 LPYELPSKLARLASIHFCD-LLTPINFLQ-EWEDYKLKWSPEEYGGVDTLHVPSEHIWLP 549
L + + L RL + + +LT +L+ +W D KL W+P ++GGV+ +H+PS+ IW+P
Sbjct: 54 LKVKFGANLCRLIDVDEVNQVLTTSLWLEMQWYDKKLTWNPTDWGGVEYIHIPSDQIWIP 113
Query: 550 DIVLYN 555
DIVLYN
Sbjct: 114 DIVLYN 119
>WB|WBGene00000043 [details] [associations]
symbol:acr-3 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA;IDA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA;IDA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0015464 "acetylcholine receptor activity" evidence=IDA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
HOGENOM:HOG000006756 GeneTree:ENSGT00630000089708 KO:K05312
eggNOG:NOG267576 GO:GO:0015464 TCDB:1.A.9.1.2 EMBL:FO081325
EMBL:Y08637 RefSeq:NP_509129.1 UniGene:Cel.19671
ProteinModelPortal:Q93149 SMR:Q93149 EnsemblMetazoa:K11G12.7
GeneID:180937 KEGG:cel:CELE_K11G12.7 UCSC:K11G12.7 CTD:180937
WormBase:K11G12.7 InParanoid:Q93149 OMA:PREFDGI NextBio:911642
Uniprot:Q93149
Length = 487
Score = 706 (253.6 bits), Expect = 1.1e-69, P = 1.1e-69
Identities = 142/369 (38%), Positives = 218/369 (59%)
Query: 15 LFPSLTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEV 74
LF +T + + + N +RL + YN LIRPV N S +++ L+ ++ +
Sbjct: 6 LFSIITIFLITELQCYPNSAEERLLSYIFDGYNSLIRPVLNASSP-PIEVFFSLAFVLLI 64
Query: 75 NLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLP 134
N+ KNQIM TNVW +W DY+++W P E+ G+ T+ VP + +WLP
Sbjct: 65 NVDE-------------KNQIMQTNVWPTMKWNDYQMQWDPREFDGIKTIRVPPDKVWLP 111
Query: 135 DIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGS 194
DIVL+NNADGNY V+ + ++ + G ++W PPA+YKS C IDVE+FPFD Q C + FGS
Sbjct: 112 DIVLFNNADGNYLVSFYSNVVVEHTGDMLWVPPAVYKSSCLIDVEFFPFDEQVCSLTFGS 171
Query: 195 WTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPD 254
WT+ + L ++ S K + +L DY S WD++ P + ++
Sbjct: 172 WTFRKDELQLSYL-----SGKRHV--ELNDYLPSGVWDLIDAPGLLIDE--------RSK 216
Query: 255 IIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXX 314
I + I +RRK LFYTV LI+P V ++FLS++VFYLP++S EK++L
Sbjct: 217 ISYQIKIRRKALFYTVILIMPTVLMAFLSMMVFYLPAESSEKITLAISILLALVVFLLVV 276
Query: 315 AEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVL 374
++I+PPTS T+PL+ KYLL T I+ ++++V++ ++NV FR P TH+M WV VF++ L
Sbjct: 277 SKILPPTSSTIPLMAKYLLMTFIMNMITIMVSVIIINVYFRGPATHIMPNWVKTVFLKFL 336
Query: 375 PKILFIQRP 383
P + ++RP
Sbjct: 337 PVLFVMRRP 345
Score = 132 (51.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 18/36 (50%), Positives = 28/36 (77%)
Query: 520 EWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+W DY+++W P E+ G+ T+ VP + +WLPDIVL+N
Sbjct: 82 KWNDYQMQWDPREFDGIKTIRVPPDKVWLPDIVLFN 117
>UNIPROTKB|I3LPQ6 [details] [associations]
symbol:CHRNA9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050910 "detection of mechanical stimulus involved in
sensory perception of sound" evidence=IEA] [GO:0042472 "inner ear
morphogenesis" evidence=IEA] [GO:0007204 "elevation of cytosolic
calcium ion concentration" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0042472 GO:GO:0004889 GO:GO:0050910
GO:GO:0007204 GeneTree:ENSGT00630000089708 OMA:QWARVVI
EMBL:CU407133 Ensembl:ENSSSCT00000032423 Uniprot:I3LPQ6
Length = 482
Score = 706 (253.6 bits), Expect = 1.1e-69, P = 1.1e-69
Identities = 142/346 (41%), Positives = 205/346 (59%)
Query: 35 AKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQ 94
A++L++DL +Y+ +RPV + L V + + LSQ+ +++ +NQI+T +W+ Q
Sbjct: 34 AQKLFNDLFEDYSNALRPVEDTDKVLNVTLQITLSQIKDMDERNQILTAYLWIRQI---- 89
Query: 95 IMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKA 154
W D L W + Y G+D++ +PS+ +W PDIVLYN AD + + T
Sbjct: 90 -----------WHDAYLTWDRDMYDGLDSIRIPSDLVWRPDIVLYNKADDDSSEPVNTNV 138
Query: 155 ILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSD 214
+L YDG + W+ PAI KS C +DV YFPFD Q C + FGSWTY+G VD+ + L
Sbjct: 139 VLRYDGLITWDAPAITKSSCVVDVTYFPFDHQQCNLTFGSWTYNGNQVDIFNAL------ 192
Query: 215 KIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLII 274
D G DL D+ VEW++ +PAV+N Y CC EPYPD+ F + L+R++ FY VNL+I
Sbjct: 193 --DSG-DLSDFIEDVEWEVHGMPAVKNVISYGCCSEPYPDVTFTLLLKRRSSFYIVNLLI 249
Query: 275 PCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLF 334
PCV ISFL+ L FYLP+ SGEKVSL AEI+P S VPL+GKY +
Sbjct: 250 PCVLISFLAPLSFYLPAASGEKVSLGVTILLAMTVFQLMVAEIMP-ASENVPLIGKYYIA 308
Query: 335 TMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFI 380
TM L+T S +TI V+N++F + W V ++ + ++LF+
Sbjct: 309 TMALITASTALTIMVMNIHFCGAEARPVPHWARVVILKYMSRLLFV 354
>UNIPROTKB|F1NJ26 [details] [associations]
symbol:CHRND "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005892 "acetylcholine-gated channel complex"
evidence=IEA] [GO:0042166 "acetylcholine binding" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
[GO:0048630 "skeletal muscle tissue growth" evidence=IEA]
[GO:0050881 "musculoskeletal movement" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0042391 GO:GO:0042166
GO:GO:0004889 GO:GO:0005892 GeneTree:ENSGT00620000087691
OMA:FIVNHMR IPI:IPI00592975 EMBL:AADN02020674
Ensembl:ENSGALT00000012824 Uniprot:F1NJ26
Length = 513
Score = 705 (253.2 bits), Expect = 1.4e-69, P = 1.4e-69
Identities = 148/374 (39%), Positives = 226/374 (60%)
Query: 23 VFSVIIAQGN---DEAKRLYDDLLSN--YNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLK 77
+F ++ G ++ +RL L YN+ +RPV + + + V + L LS LI +LK
Sbjct: 7 LFGALVLSGGLCVNQEERLIHHLFEERGYNKEVRPVASADEVVDVYLALTLSNLI--SLK 64
Query: 78 NQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIV 137
V++ L TTNVWV Q W DY+L+W+ E+GGVD L + E +WLP+IV
Sbjct: 65 E--------VDETL-----TTNVWVEQSWTDYRLQWNTSEFGGVDVLRLLPEMLWLPEIV 111
Query: 138 LYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTY 197
L NN DG +EV +++ G V W PPAI++S C I+V +FPFD Q C +KF S Y
Sbjct: 112 LENNNDGLFEVAYYCNVLVYNTGYVYWLPPAIFRSACPINVNFFPFDWQNCTLKFSSLAY 171
Query: 198 DGYTVDLKHILQ--GPDSDK---ID-IGIDLQDYYLSVEWDIMKVPAVRN-EKFYSCCEE 250
+ +++ H+ + P+++K ++ I ID + + + EW+I+ PA +N Y
Sbjct: 172 NAQEINM-HLKEESDPETEKNYRVEWIIIDPEGFTENGEWEIIHRPARKNIHPSYPTESS 230
Query: 251 PYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXX 310
+ DI F + ++RK LFY +N++ PCV I+F+++LVFYLP+DSGEK++L
Sbjct: 231 EHQDITFYLIIKRKPLFYVINIVTPCVLIAFMAILVFYLPADSGEKMTLVISVLLAQSVF 290
Query: 311 XXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVF 370
++ +P TS +PL+GKYLLF M+LVT VV+ + VLN +FR+P THVM WV +VF
Sbjct: 291 LLLVSQRLPATSHAIPLIGKYLLFIMLLVTAVVVICVVVLNFHFRTPSTHVMSDWVKEVF 350
Query: 371 IEVLPKILFIQRPA 384
+E+LP++L + PA
Sbjct: 351 LEILPRLLHMSHPA 364
Score = 127 (49.8 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 26/58 (44%), Positives = 36/58 (62%)
Query: 500 LARLASIHFCD--LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
L+ L S+ D L T + Q W DY+L+W+ E+GGVD L + E +WLP+IVL N
Sbjct: 57 LSNLISLKEVDETLTTNVWVEQSWTDYRLQWNTSEFGGVDVLRLLPEMLWLPEIVLEN 114
>UNIPROTKB|P02717 [details] [associations]
symbol:CHNRD "Acetylcholine receptor subunit delta"
species:9031 "Gallus gallus" [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006757 CTD:1144 KO:K04816 EMBL:K02903 EMBL:X52010
IPI:IPI00592975 PIR:A03176 RefSeq:NP_001026488.1 UniGene:Gga.32106
ProteinModelPortal:P02717 SMR:P02717 GeneID:424940 KEGG:gga:424940
eggNOG:NOG294470 InParanoid:P02717 OrthoDB:EOG4VMFF8
NextBio:20827200 Uniprot:P02717
Length = 513
Score = 703 (252.5 bits), Expect = 2.4e-69, P = 2.4e-69
Identities = 148/374 (39%), Positives = 225/374 (60%)
Query: 23 VFSVIIAQGN---DEAKRLYDDLLSN--YNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLK 77
+F ++ G ++ +RL L YN+ +RPV + + + V + L LS LI +LK
Sbjct: 7 LFGALVLSGGLCVNQEERLIHHLFEERGYNKEVRPVASADEVVDVYLALTLSNLI--SLK 64
Query: 78 NQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIV 137
V++ L TTNVWV Q W DY+L+W+ E+GGVD L + E +WLP+IV
Sbjct: 65 E--------VDETL-----TTNVWVEQSWTDYRLQWNTSEFGGVDVLRLLPEMLWLPEIV 111
Query: 138 LYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTY 197
L NN DG +EV +++ G V W PPAI++S C I+V +FPFD Q C +KF S Y
Sbjct: 112 LENNNDGLFEVAYYCNVLVYNTGYVYWLPPAIFRSACPINVNFFPFDWQNCTLKFSSLAY 171
Query: 198 DGYTVDLKHILQ--GPDSDK---ID-IGIDLQDYYLSVEWDIMKVPAVRN-EKFYSCCEE 250
+ +++ H+ + P+++K ++ I ID + + + EW+I+ PA +N Y
Sbjct: 172 NAQEINM-HLKEESDPETEKNYRVEWIIIDPEGFTENGEWEIIHRPARKNIHPSYPTESS 230
Query: 251 PYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXX 310
+ DI F + ++RK LFY +N++ PCV I+F+++LVFYLP+DSGEK++L
Sbjct: 231 EHQDITFYLIIKRKPLFYVINIVTPCVLIAFMAILVFYLPADSGEKMTLVISVLLAQSVF 290
Query: 311 XXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVF 370
++ +P TS +PL+GKYLLF M+LVT VV+ + VLN +FR+P THVM WV VF
Sbjct: 291 LLLVSQRLPATSHAIPLIGKYLLFIMLLVTAVVVICVVVLNFHFRTPSTHVMSDWVRGVF 350
Query: 371 IEVLPKILFIQRPA 384
+E+LP++L + PA
Sbjct: 351 LEILPRLLHMSHPA 364
Score = 127 (49.8 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 26/58 (44%), Positives = 36/58 (62%)
Query: 500 LARLASIHFCD--LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
L+ L S+ D L T + Q W DY+L+W+ E+GGVD L + E +WLP+IVL N
Sbjct: 57 LSNLISLKEVDETLTTNVWVEQSWTDYRLQWNTSEFGGVDVLRLLPEMLWLPEIVLEN 114
>UNIPROTKB|E2QUF7 [details] [associations]
symbol:CHRNA9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050910 "detection of mechanical stimulus
involved in sensory perception of sound" evidence=IEA] [GO:0042472
"inner ear morphogenesis" evidence=IEA] [GO:0007204 "elevation of
cytosolic calcium ion concentration" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0042472 GO:GO:0004889 GO:GO:0050910
GO:GO:0007204 GeneTree:ENSGT00630000089708 CTD:55584 KO:K04810
OMA:CAQYKVL EMBL:AAEX03002531 RefSeq:XP_545950.3
ProteinModelPortal:E2QUF7 Ensembl:ENSCAFT00000025220 GeneID:488832
KEGG:cfa:488832 NextBio:20862120 Uniprot:E2QUF7
Length = 479
Score = 702 (252.2 bits), Expect = 3.0e-69, P = 3.0e-69
Identities = 141/346 (40%), Positives = 204/346 (58%)
Query: 35 AKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQ 94
A++L++DL +Y+ +RPV + L V + + LSQ+ +++ +NQI+T +W+ Q
Sbjct: 31 AQKLFNDLFEDYSNALRPVEDTDKVLNVTLQITLSQIKDMDERNQILTAYLWIRQI---- 86
Query: 95 IMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKA 154
W D L W ++Y G+D++ +PS+ +W PDIVLYN AD + T
Sbjct: 87 -----------WHDAYLTWDRDQYDGLDSIRIPSDLVWRPDIVLYNKADDESSEPVNTNV 135
Query: 155 ILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSD 214
+L YDG + W+ PAI KS C +DV YFPFD Q C + FGSWTY+G VD+ + L
Sbjct: 136 VLRYDGLITWDAPAITKSSCVVDVTYFPFDNQQCNLTFGSWTYNGNQVDIFNAL------ 189
Query: 215 KIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLII 274
D G DL D+ VEW++ +PAV+N Y CC EPYPD+ F + L+R++ FY VNL+I
Sbjct: 190 --DSG-DLSDFIEDVEWEVHGMPAVKNVISYGCCSEPYPDVTFTLLLKRRSSFYIVNLLI 246
Query: 275 PCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLF 334
PCV ISFL+ L FYLP+ SGEKVSL AEI+P S VPL+GKY +
Sbjct: 247 PCVLISFLAPLSFYLPAASGEKVSLGVTILLAMTVFQLMVAEIMP-ASENVPLIGKYYIA 305
Query: 335 TMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFI 380
TM L+T S +TI V+N++F + W V ++ + ++L +
Sbjct: 306 TMALITASTALTIMVMNIHFCGAEARPVPHWARVVILKYMSRVLCV 351
>RGD|621534 [details] [associations]
symbol:Chrna9 "cholinergic receptor, nicotinic, alpha 9
(neuronal)" species:10116 "Rattus norvegicus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISO;IDA] [GO:0005262 "calcium channel activity"
evidence=IEA] [GO:0005892 "acetylcholine-gated channel complex"
evidence=IDA] [GO:0006812 "cation transport" evidence=ISO]
[GO:0007204 "elevation of cytosolic calcium ion concentration"
evidence=IEA;ISO] [GO:0007605 "sensory perception of sound"
evidence=IEP] [GO:0030054 "cell junction" evidence=IEA] [GO:0034220
"ion transmembrane transport" evidence=ISO] [GO:0042472 "inner ear
morphogenesis" evidence=IEA;ISO] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050910 "detection of mechanical
stimulus involved in sensory perception of sound" evidence=IEA;ISO]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 RGD:621534
GO:GO:0005262 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0042472 HOVERGEN:HBG003756 GO:GO:0004889
eggNOG:NOG306809 HOGENOM:HOG000006756 GO:GO:0050910 GO:GO:0007204
GeneTree:ENSGT00630000089708 GO:GO:0005892 CTD:55584 KO:K04810
OrthoDB:EOG470TH4 OMA:CAQYKVL EMBL:U12336 EMBL:AY574257
IPI:IPI00197478 PIR:A55382 RefSeq:NP_075219.1 UniGene:Rn.54463
ProteinModelPortal:P43144 STRING:P43144 PhosphoSite:P43144
DNASU:65024 Ensembl:ENSRNOT00000003382 GeneID:65024 KEGG:rno:65024
UCSC:RGD:621534 InParanoid:P43144 BindingDB:P43144
ChEMBL:CHEMBL2585 NextBio:613788 Genevestigator:P43144
GermOnline:ENSRNOG00000002484 GO:GO:0007605 Uniprot:P43144
Length = 479
Score = 702 (252.2 bits), Expect = 3.0e-69, P = 3.0e-69
Identities = 142/346 (41%), Positives = 203/346 (58%)
Query: 35 AKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQ 94
A++L+ DL +Y+ +RPV + L V + + LSQ+ +++ +NQI+T +W+ Q
Sbjct: 31 AQKLFSDLFEDYSSALRPVEDTDAVLNVTLQVTLSQIKDMDERNQILTAYLWIRQT---- 86
Query: 95 IMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKA 154
W D L W ++Y +D++ +PS+ +W PDIVLYN AD + T
Sbjct: 87 -----------WHDAYLTWDRDQYDRLDSIRIPSDLVWRPDIVLYNKADDESSEPVNTNV 135
Query: 155 ILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSD 214
+L YDG + W+ PAI KS C +DV YFPFD Q C + FGSWTY+G VD+ + L
Sbjct: 136 VLRYDGLITWDSPAITKSSCVVDVTYFPFDSQQCNLTFGSWTYNGNQVDIFNAL------ 189
Query: 215 KIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLII 274
D G DL D+ VEW++ +PAV+N Y CC EPYPD+ F + L+R++ FY VNL+I
Sbjct: 190 --DSG-DLSDFIEDVEWEVHGMPAVKNVISYGCCSEPYPDVTFTLLLKRRSSFYIVNLLI 246
Query: 275 PCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLF 334
PCV ISFL+ L FYLP+ SGEKVSL AEI+P S VPL+GKY +
Sbjct: 247 PCVLISFLAPLSFYLPAASGEKVSLGVTILLAMTVFQLMVAEIMP-ASENVPLIGKYYIA 305
Query: 335 TMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFI 380
TM L+T S +TI V+N++F + W V ++ + +ILF+
Sbjct: 306 TMALITASTALTIMVMNIHFCGAEARPVPHWAKVVILKYMSRILFV 351
>FB|FBgn0028875 [details] [associations]
symbol:nAcRalpha-34E "nicotinic Acetylcholine Receptor alpha
34E" species:7227 "Drosophila melanogaster" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISS;IDA;NAS] [GO:0005892 "acetylcholine-gated channel
complex" evidence=ISS;IDA;NAS] [GO:0006811 "ion transport"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0042166 "acetylcholine binding" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IDA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 EMBL:AE014134 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0042166 GO:GO:0004889
GeneTree:ENSGT00630000089708 eggNOG:NOG235631 KO:K05312
GO:GO:0005892 RefSeq:NP_001246027.1 RefSeq:NP_995707.2
RefSeq:NP_995708.1 UniGene:Dm.5939 HSSP:P22770 SMR:Q7KT97
STRING:Q7KT97 EnsemblMetazoa:FBtr0080594 EnsemblMetazoa:FBtr0300594
EnsemblMetazoa:FBtr0309867 GeneID:34826 KEGG:dme:Dmel_CG32975
UCSC:CG32975-RB CTD:34826 FlyBase:FBgn0028875 InParanoid:Q7KT97
OMA:VDDDELW OrthoDB:EOG4R4XHV GenomeRNAi:34826 NextBio:790405
Uniprot:Q7KT97
Length = 808
Score = 701 (251.8 bits), Expect = 3.8e-69, P = 3.8e-69
Identities = 135/292 (46%), Positives = 184/292 (63%)
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
KNQ++ TNVW+ EW D L+W+ +YGGV L +P IW PD+++YN+AD ++ T
Sbjct: 355 KNQLLVTNVWLKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYNSADEGFDGTYQ 414
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
T ++ +G ++ PP I+KS C+ID+ +FPFD Q C MKFGSWTYDG+ +DL+ LQ
Sbjct: 415 TNVVVRNNGSCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQ--LQD- 471
Query: 212 DSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVN 271
+ G D+ Y L+ EW+++ VP RNE +Y+CC EPY DI F I +RR+TL+Y N
Sbjct: 472 -----ETGGDISSYVLNGEWELLGVPGKRNEIYYNCCPEPYIDITFAIIIRRRTLYYFFN 526
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
LIIPCV I+ +++L F LP DSGEK+SL AE +P TS VPLLG Y
Sbjct: 527 LIIPCVLIASMALLGFTLPPDSGEKLSLGVTILLSLTVFLNMVAETMPATSDAVPLLGTY 586
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
M +V SVV TI +LN + R+ TH M W+ VF+ LP IL + RP
Sbjct: 587 FNCIMFMVASSVVSTILILNYHHRNADTHEMSEWIRIVFLCWLPWILRMSRP 638
Score = 416 (151.5 bits), Expect = 4.5e-38, P = 4.5e-38
Identities = 82/187 (43%), Positives = 112/187 (59%)
Query: 19 LTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKN 78
L +L S + KRL DLL YN L RPV N SD L + GL L Q+I+V+ KN
Sbjct: 297 LIYLNLSAKVCLAGYHEKRLLHDLLDPYNTLERPVLNESDPLQLSFGLTLMQIIDVDEKN 356
Query: 79 QIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVL 138
Q++ TNVW LK EW D L+W+ +YGGV L +P IW PD+++
Sbjct: 357 QLLVTNVW----LK-----------LEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLM 401
Query: 139 YNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYD 198
YN+AD ++ T T ++ +G ++ PP I+KS C+ID+ +FPFD Q C MKFGSWTYD
Sbjct: 402 YNSADEGFDGTYQTNVVVRNNGSCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYD 461
Query: 199 GYTVDLK 205
G+ +DL+
Sbjct: 462 GFQLDLQ 468
Score = 122 (48.0 bits), Expect = 0.00061, P = 0.00061
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 511 LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
L+T + EW D L+W+ +YGGV L +P IW PD+++YN
Sbjct: 359 LVTNVWLKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYN 403
>WB|WBGene00000048 [details] [associations]
symbol:acr-9 species:6239 "Caenorhabditis elegans"
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0004889 HOGENOM:HOG000006756
GeneTree:ENSGT00630000089708 eggNOG:NOG235631 KO:K05312 EMBL:Z70266
PIR:T19862 RefSeq:NP_510285.2 ProteinModelPortal:Q18556 SMR:Q18556
EnsemblMetazoa:C40C9.2 GeneID:191597 KEGG:cel:CELE_C40C9.2
UCSC:C40C9.2 CTD:191597 WormBase:C40C9.2 InParanoid:Q18556
OMA:RIPGNAN NextBio:949616 Uniprot:Q18556
Length = 534
Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
Identities = 141/350 (40%), Positives = 209/350 (59%)
Query: 37 RLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIM 96
RL DL NY+ RPV N S+ L V + + L Q+++V+ KNQ++T W+
Sbjct: 30 RLLADLRHNYDPYERPVANASEPLVVSVKIYLQQILDVDEKNQVITLVAWIEY------- 82
Query: 97 TTNVWVNQEWEDYKLKWSPEEYGGVDTLHVP--SEHIWLPDIVLYNNADGNYEVTIMTKA 154
+W DYKLKW P EYGG+ + +P + IW PD++LYN+AD N++ T
Sbjct: 83 --------QWTDYKLKWDPSEYGGIKDIRIPGNANAIWKPDVLLYNSADENFDSTYPVNY 134
Query: 155 ILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSD 214
++ Y G V+ PP I K C+ID+ YFPFD Q C +KFGSWTY G +DL+ + GP+
Sbjct: 135 VVSYTGDVLQVPPGILKLSCKIDITYFPFDDQICHLKFGSWTYSGNFIDLR--INGPEGK 192
Query: 215 KI-DIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLI 273
I D GID+Q Y + EW+++ VPA + E+PYP + F + ++R+TL+Y +NLI
Sbjct: 193 NISDEGIDVQYYVQNGEWNLLAVPARHETNIFD--EQPYPSLFFYLIIQRRTLYYGLNLI 250
Query: 274 IPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYLL 333
IP IS ++VL F LP D+GEK++L A++ PPTS VPL+G +
Sbjct: 251 IPSFLISLMTVLGFTLPPDAGEKITLEITILLSVCFFLSMVADMTPPTSEAVPLIGAFFS 310
Query: 334 FTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
M++V+ SVV T+ VLN++ R P TH M P++ ++ + LP +L ++RP
Sbjct: 311 CCMLVVSASVVFTVLVLNLHNRKPETHEMSPFLRELLLIWLPWLLLMRRP 360
Score = 131 (51.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 21/48 (43%), Positives = 34/48 (70%)
Query: 511 LLTPINFLQ-EWEDYKLKWSPEEYGGVDTLHVP--SEHIWLPDIVLYN 555
++T + +++ +W DYKLKW P EYGG+ + +P + IW PD++LYN
Sbjct: 73 VITLVAWIEYQWTDYKLKWDPSEYGGIKDIRIPGNANAIWKPDVLLYN 120
>MGI|MGI:87890 [details] [associations]
symbol:Chrnb1 "cholinergic receptor, nicotinic, beta
polypeptide 1 (muscle)" species:10090 "Mus musculus" [GO:0001941
"postsynaptic membrane organization" evidence=ISO] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISO;IGI] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005892
"acetylcholine-gated channel complex" evidence=ISO;IDA] [GO:0006810
"transport" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0006812 "cation transport" evidence=ISO;IGI] [GO:0006936
"muscle contraction" evidence=ISO] [GO:0007165 "signal
transduction" evidence=ISO] [GO:0007271 "synaptic transmission,
cholinergic" evidence=ISO] [GO:0007274 "neuromuscular synaptic
transmission" evidence=ISO] [GO:0015267 "channel activity"
evidence=ISO] [GO:0015276 "ligand-gated ion channel activity"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034220 "ion transmembrane transport"
evidence=IGI] [GO:0035095 "behavioral response to nicotine"
evidence=ISO] [GO:0042166 "acetylcholine binding" evidence=IMP]
[GO:0042391 "regulation of membrane potential" evidence=IGI]
[GO:0045202 "synapse" evidence=ISO] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0048747 "muscle fiber development"
evidence=ISO] [GO:0050877 "neurological system process"
evidence=ISO] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 MGI:MGI:87890 GO:GO:0035095 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007274 GO:GO:0007271
GO:GO:0042391 GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889
GO:GO:0005892 GO:GO:0015464 HOGENOM:HOG000006757
GeneTree:ENSGT00620000087691 CTD:1140 eggNOG:NOG243276 KO:K04812
OMA:FIDGPNR OrthoDB:EOG4DFPNC GO:GO:0006936 GO:GO:0048747
GO:GO:0001941 EMBL:M14537 EMBL:J04699 EMBL:AK087554 EMBL:AL603707
IPI:IPI00109155 PIR:A33358 RefSeq:NP_033731.3 UniGene:Mm.86425
ProteinModelPortal:P09690 SMR:P09690 MINT:MINT-2983098
STRING:P09690 PhosphoSite:P09690 PRIDE:P09690
Ensembl:ENSMUST00000045971 GeneID:11443 KEGG:mmu:11443
UCSC:uc007jrq.2 InParanoid:Q5F292 BindingDB:P09690
ChEMBL:CHEMBL2690 NextBio:278748 Bgee:P09690 Genevestigator:P09690
GermOnline:ENSMUSG00000041189 Uniprot:P09690
Length = 501
Score = 692 (248.7 bits), Expect = 3.5e-68, P = 3.5e-68
Identities = 138/358 (38%), Positives = 215/358 (60%)
Query: 29 AQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVN 88
A+G++ +L L SNY+ +RP D++ V +GL L+QLI +N K++ M+T V+++
Sbjct: 21 ARGSEAEGQLIKKLFSNYDSSVRPAREVGDRVGVSIGLTLAQLISLNEKDEEMSTKVYLD 80
Query: 89 QNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEV 148
EW DY+L W P E+ G+D+L + +E +WLPD+VL NN DGN++V
Sbjct: 81 L---------------EWTDYRLSWDPAEHDGIDSLRITAESVWLPDVVLLNNNDGNFDV 125
Query: 149 TIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHIL 208
+ ++ ++G V W PP +Y+S C I V YFPFD Q C M F S++YD V LK L
Sbjct: 126 ALDINVVVSFEGSVRWQPPGLYRSSCSIQVTYFPFDWQNCTMVFSSYSYDSSEVSLKTGL 185
Query: 209 QGPDSDKIDIGIDLQDYYLSVEWDIMKVPA--VRNEKFYSCCEEPY-PDIIFNITLRRKT 265
++ ++ I + + +W+I+ P+ ++ +E + ++IF + +RRK
Sbjct: 186 DPEGEERQEVYIHEGTFIENGQWEIIHKPSRLIQLPGDQRGGKEGHHEEVIFYLIIRRKP 245
Query: 266 LFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTV 325
LFY VN+I PC+ I+ L++ VFYLP D+GEK+ L A+ +P TSL V
Sbjct: 246 LFYLVNVIAPCILITLLAIFVFYLPPDAGEKMGLSIFALLTLTVFLLLLADKVPETSLAV 305
Query: 326 PLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
P++ KYL+FTM+LVT SV++++ VLN++ RSP TH M WV ++FI LP L ++RP
Sbjct: 306 PIIIKYLMFTMVLVTFSVILSVVVLNLHHRSPHTHQMPFWVRQIFIHKLPPYLGLKRP 363
Score = 139 (54.0 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 30/91 (32%), Positives = 49/91 (53%)
Query: 469 DGTDVSPTFDN--QMILMPRPLTWRLPYELPSKLARLASIHFCD--LLTPINFLQEWEDY 524
+G + F N + R + R+ + LA+L S++ D + T + EW DY
Sbjct: 27 EGQLIKKLFSNYDSSVRPAREVGDRVGVSIGLTLAQLISLNEKDEEMSTKVYLDLEWTDY 86
Query: 525 KLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+L W P E+ G+D+L + +E +WLPD+VL N
Sbjct: 87 RLSWDPAEHDGIDSLRITAESVWLPDVVLLN 117
>ZFIN|ZDB-GENE-040108-3 [details] [associations]
symbol:chrna7 "cholinergic receptor, nicotinic, alpha
polypeptide 7" species:7955 "Danio rerio" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0015464 "acetylcholine receptor
activity" evidence=IDA] [GO:0005892 "acetylcholine-gated channel
complex" evidence=IDA] [GO:0045202 "synapse" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 ZFIN:ZDB-GENE-040108-3 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00630000089708 GO:GO:0005892 EMBL:BX649433
IPI:IPI00817270 ProteinModelPortal:F1QM95
Ensembl:ENSDART00000134733 ArrayExpress:F1QM95 Bgee:F1QM95
Uniprot:F1QM95
Length = 510
Score = 689 (247.6 bits), Expect = 7.2e-68, P = 7.2e-68
Identities = 129/292 (44%), Positives = 184/292 (63%)
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
KNQ++TTN+W+ W DY L+W+ EY GV + P IW PDI+LYN+AD ++ T
Sbjct: 69 KNQVLTTNIWLQLYWYDYYLQWNASEYPGVTNVRFPDSQIWKPDILLYNSADERFDATFH 128
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
T +++ G + PP I+KS C IDV +FPFD+Q C +KFGSWTY G+++DL+ I
Sbjct: 129 TNVLVNSSGACQYLPPGIFKSTCYIDVRWFPFDLQRCDLKFGSWTYGGWSLDLQMI---- 184
Query: 212 DSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVN 271
D+D + Y + EWD+++VP RNE+FY CC+EPYPD+ F + +RR+TL+Y +N
Sbjct: 185 DAD-------ITGYIANGEWDLVEVPGRRNERFYDCCKEPYPDVTFTVVMRRRTLYYGLN 237
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
L+IPCV IS L++LVF LP+DSGEK+SL AEI+P TS +VPL+ +Y
Sbjct: 238 LLIPCVLISTLALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQY 297
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
TM++V LSV+ T+ VL ++ P M W V + L ++RP
Sbjct: 298 FATTMVIVGLSVIATVWVLQYHYHDPEGGKMPKWTRVVLLNWCAWFLRMKRP 349
Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
Identities = 77/186 (41%), Positives = 115/186 (61%)
Query: 22 LVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIM 81
+V S ++ + +RLY DL+ +YN L RPV N++ LTV + L Q+++V+ KNQ++
Sbjct: 14 IVHSPTVSLQGEHQRRLYRDLMKDYNPLERPVFNDTHSLTVYFSMSLMQIMDVDEKNQVL 73
Query: 82 TTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNN 141
TTN+W+ Q+ W DY L+W+ EY GV + P IW PDI+LYN+
Sbjct: 74 TTNIWL------QLY---------WYDYYLQWNASEYPGVTNVRFPDSQIWKPDILLYNS 118
Query: 142 ADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYT 201
AD ++ T T +++ G + PP I+KS C IDV +FPFD+Q C +KFGSWTY G++
Sbjct: 119 ADERFDATFHTNVLVNSSGACQYLPPGIFKSTCYIDVRWFPFDLQRCDLKFGSWTYGGWS 178
Query: 202 VDLKHI 207
+DL+ I
Sbjct: 179 LDLQMI 184
>UNIPROTKB|Q866A2 [details] [associations]
symbol:CHRNA7 "Neuronal acetylcholine receptor subunit
alpha-7" species:9544 "Macaca mulatta" [GO:0000187 "activation of
MAPK activity" evidence=ISS] [GO:0001540 "beta-amyloid binding"
evidence=ISS] [GO:0001666 "response to hypoxia" evidence=ISS]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0005892 "acetylcholine-gated channel complex" evidence=ISS]
[GO:0006816 "calcium ion transport" evidence=ISS] [GO:0006874
"cellular calcium ion homeostasis" evidence=ISS] [GO:0007165
"signal transduction" evidence=ISS] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISS] [GO:0015464
"acetylcholine receptor activity" evidence=ISS] [GO:0015643 "toxic
substance binding" evidence=ISS] [GO:0017081 "chloride channel
regulator activity" evidence=ISS] [GO:0032720 "negative regulation
of tumor necrosis factor production" evidence=ISS] [GO:0035094
"response to nicotine" evidence=ISS] [GO:0042166 "acetylcholine
binding" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0045766 "positive regulation of
angiogenesis" evidence=ISS] [GO:0050890 "cognition" evidence=ISS]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0042803
GO:GO:0009897 GO:GO:0016324 GO:GO:0008284 GO:GO:0007613
GO:GO:0035095 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0050890 GO:GO:0050728 GO:GO:0001666
GO:GO:0006897 GO:GO:0014061 GO:GO:0007271 GO:GO:0000187
GO:GO:0045766 GO:GO:0042391 GO:GO:0001540 GO:GO:0042166
HOVERGEN:HBG003756 GO:GO:0004889 HOGENOM:HOG000006756
GeneTree:ENSGT00630000089708 eggNOG:NOG235631 GO:GO:0005892
GO:GO:0015464 GO:GO:0035094 GO:GO:0042113 GO:GO:0006816 CTD:1139
KO:K04809 OrthoDB:EOG483D4K GO:GO:0017081 GO:GO:0015643
GO:GO:0006874 GO:GO:0032720 OMA:AGPPATN EMBL:AF486623
RefSeq:NP_001028055.1 UniGene:Mmu.3473 ProteinModelPortal:Q866A2
SMR:Q866A2 Ensembl:ENSMMUT00000031766 GeneID:574230 KEGG:mcc:574230
InParanoid:Q866A2 NextBio:19985208 GO:GO:0008306 GO:GO:0048149
GO:GO:0060112 GO:GO:0032691 GO:GO:0032715 GO:GO:0001988
GO:GO:0032225 GO:GO:0032094 GO:GO:0030317 GO:GO:0042110
Uniprot:Q866A2
Length = 502
Score = 689 (247.6 bits), Expect = 7.2e-68, P = 7.2e-68
Identities = 131/292 (44%), Positives = 184/292 (63%)
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
KNQ++TTN+W+ W D+ L+W+ EY GV T+ P IW PDI+LYN+AD ++ T
Sbjct: 68 KNQVLTTNIWLQMSWTDHYLQWNVSEYPGVKTVRFPDGQIWKPDILLYNSADERFDATFH 127
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
T +++ G + PP I+KS C IDV +FPFDVQ C +KFGSW+Y G+++DL+ +Q
Sbjct: 128 TNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQHCKLKFGSWSYGGWSLDLQ--MQEA 185
Query: 212 DSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVN 271
D + Y S EWD++ +P R+EKFY CC+EPYPD+ F +T+RR+TL+Y +N
Sbjct: 186 D---------ISGYIPSGEWDLVGIPGKRSEKFYECCKEPYPDVTFTVTMRRRTLYYGLN 236
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
L+IPCV IS L++LVF LP+DSGEK+SL AEI+P TS +VPL+ +Y
Sbjct: 237 LLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQY 296
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
TMI+V LSVVVT+ VL + P M W + + L ++RP
Sbjct: 297 FASTMIIVGLSVVVTVIVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRMKRP 348
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 77/176 (43%), Positives = 110/176 (62%)
Query: 30 QGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQ 89
QG + K LY +L+ NYN L RPV N+S LTV L L Q+++V+ KNQ++TTN+W+
Sbjct: 22 QGEFQRK-LYKELVKNYNPLERPVANDSQPLTVYFSLSLLQIMDVDEKNQVLTTNIWLQM 80
Query: 90 NLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVT 149
+ W D+ L+W+ EY GV T+ P IW PDI+LYN+AD ++ T
Sbjct: 81 S---------------WTDHYLQWNVSEYPGVKTVRFPDGQIWKPDILLYNSADERFDAT 125
Query: 150 IMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLK 205
T +++ G + PP I+KS C IDV +FPFDVQ C +KFGSW+Y G+++DL+
Sbjct: 126 FHTNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQHCKLKFGSWSYGGWSLDLQ 181
>MGI|MGI:99779 [details] [associations]
symbol:Chrna7 "cholinergic receptor, nicotinic, alpha
polypeptide 7" species:10090 "Mus musculus" [GO:0000187 "activation
of MAPK activity" evidence=ISO] [GO:0001540 "beta-amyloid binding"
evidence=ISO] [GO:0001666 "response to hypoxia" evidence=ISO]
[GO:0001988 "positive regulation of heart rate involved in
baroreceptor response to decreased systemic arterial blood
pressure" evidence=IMP] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=ISO;IDA;IMP]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0005892 "acetylcholine-gated channel complex" evidence=ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IMP] [GO:0006812 "cation transport" evidence=IDA;IMP]
[GO:0006816 "calcium ion transport" evidence=ISO] [GO:0006874
"cellular calcium ion homeostasis" evidence=ISO] [GO:0006897
"endocytosis" evidence=IMP] [GO:0007165 "signal transduction"
evidence=ISO] [GO:0007271 "synaptic transmission, cholinergic"
evidence=ISO;IMP] [GO:0007613 "memory" evidence=IMP] [GO:0008144
"drug binding" evidence=ISO] [GO:0008179 "adenylate cyclase
binding" evidence=ISO] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO] [GO:0008306 "associative learning"
evidence=IGI;IMP] [GO:0009897 "external side of plasma membrane"
evidence=IDA] [GO:0014061 "regulation of norepinephrine secretion"
evidence=IMP] [GO:0014069 "postsynaptic density" evidence=ISO]
[GO:0015464 "acetylcholine receptor activity" evidence=ISO]
[GO:0015643 "toxic substance binding" evidence=ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016324 "apical plasma membrane" evidence=IDA]
[GO:0017081 "chloride channel regulator activity" evidence=ISO]
[GO:0019228 "regulation of action potential in neuron"
evidence=ISO] [GO:0019901 "protein kinase binding" evidence=ISO]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030317 "sperm
motility" evidence=IMP] [GO:0030424 "axon" evidence=ISO]
[GO:0030425 "dendrite" evidence=ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0032094 "response to food" evidence=IMP]
[GO:0032225 "regulation of synaptic transmission, dopaminergic"
evidence=IMP] [GO:0032279 "asymmetric synapse" evidence=ISO]
[GO:0032691 "negative regulation of interleukin-1 beta production"
evidence=IMP] [GO:0032715 "negative regulation of interleukin-6
production" evidence=IMP] [GO:0032720 "negative regulation of tumor
necrosis factor production" evidence=ISO;IMP] [GO:0034220 "ion
transmembrane transport" evidence=ISO;IDA;IMP] [GO:0035094
"response to nicotine" evidence=ISO;IMP] [GO:0035095 "behavioral
response to nicotine" evidence=IGI] [GO:0042110 "T cell activation"
evidence=IMP] [GO:0042113 "B cell activation" evidence=IMP]
[GO:0042166 "acetylcholine binding" evidence=ISO] [GO:0042221
"response to chemical stimulus" evidence=ISO] [GO:0042391
"regulation of membrane potential" evidence=ISO;IMP] [GO:0042698
"ovulation cycle" evidence=IMP] [GO:0042734 "presynaptic membrane"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043197 "dendritic spine" evidence=ISO] [GO:0043198 "dendritic
shaft" evidence=ISO] [GO:0045121 "membrane raft" evidence=ISO]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0045471 "response to ethanol"
evidence=IMP] [GO:0045766 "positive regulation of angiogenesis"
evidence=ISO] [GO:0048149 "behavioral response to ethanol"
evidence=IMP] [GO:0050727 "regulation of inflammatory response"
evidence=IMP] [GO:0050728 "negative regulation of inflammatory
response" evidence=IMP] [GO:0050890 "cognition" evidence=ISO]
[GO:0051117 "ATPase binding" evidence=ISO] [GO:0060112 "generation
of ovulation cycle rhythm" evidence=IMP] [GO:0097110 "scaffold
protein binding" evidence=ISO] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 MGI:MGI:99779 GO:GO:0005737
GO:GO:0014069 GO:GO:0009897 GO:GO:0016324 GO:GO:0008144
GO:GO:0043198 GO:GO:0007613 GO:GO:0035095 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0043025
GO:GO:0050728 GO:GO:0006897 GO:GO:0032279 GO:GO:0042734
GO:GO:0014061 GO:GO:0007271 GO:GO:0045121 GO:GO:0042391
GO:GO:0030426 GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 eggNOG:NOG235631 GO:GO:0005892 GO:GO:0042113
CTD:1139 KO:K04809 OrthoDB:EOG483D4K GO:GO:0032720 GO:GO:0008306
GO:GO:0048149 GO:GO:0060112 GO:GO:0032691 GO:GO:0032715
GO:GO:0001988 GO:GO:0032225 GO:GO:0032094 GO:GO:0030317
GO:GO:0042110 EMBL:L37663 IPI:IPI00115489 PIR:A57175
RefSeq:NP_031416.3 UniGene:Mm.113464 ProteinModelPortal:P49582
SMR:P49582 DIP:DIP-48732N STRING:P49582 PhosphoSite:P49582
PRIDE:P49582 Ensembl:ENSMUST00000032738 GeneID:11441 KEGG:mmu:11441
InParanoid:P49582 OMA:KESCQGP BindingDB:P49582 ChEMBL:CHEMBL3365
NextBio:278744 Bgee:P49582 Genevestigator:P49582
GermOnline:ENSMUSG00000030525 GO:GO:0042416 GO:GO:0019228
Uniprot:P49582
Length = 502
Score = 688 (247.2 bits), Expect = 9.2e-68, P = 9.2e-68
Identities = 130/292 (44%), Positives = 183/292 (62%)
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
KNQ++TTN+W+ W D+ L+W+ EY GV + P IW PDI+LYN+AD ++ T
Sbjct: 68 KNQVLTTNIWLQMSWTDHYLQWNMSEYPGVKNVRFPDGQIWKPDILLYNSADERFDATFH 127
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
T +++ G + PP I+KS C IDV +FPFDVQ C +KFGSW+Y G+++DL+ +Q
Sbjct: 128 TNVLVNASGHCQYLPPGIFKSSCYIDVRWFPFDVQQCKLKFGSWSYGGWSLDLQ--MQEA 185
Query: 212 DSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVN 271
D + Y + EWD+M +P RNEKFY CC+EPYPD+ + +T+RR+TL+Y +N
Sbjct: 186 D---------ISSYIPNGEWDLMGIPGKRNEKFYECCKEPYPDVTYTVTMRRRTLYYGLN 236
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
L+IPCV IS L++LVF LP+DSGEK+SL AEI+P TS +VPL+ +Y
Sbjct: 237 LLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQY 296
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
TMI+V LSVVVT+ VL + P M W + + L ++RP
Sbjct: 297 FASTMIIVGLSVVVTVIVLRYHHHDPDGGKMPKWTRIILLNWCAWFLRMKRP 348
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 76/176 (43%), Positives = 110/176 (62%)
Query: 30 QGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQ 89
QG + +RLY +L+ NYN L RPV N+S LTV L L Q+++V+ KNQ++TTN+W+
Sbjct: 22 QGEFQ-RRLYKELVKNYNPLERPVANDSQPLTVYFSLSLLQIMDVDEKNQVLTTNIWLQM 80
Query: 90 NLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVT 149
+ W D+ L+W+ EY GV + P IW PDI+LYN+AD ++ T
Sbjct: 81 S---------------WTDHYLQWNMSEYPGVKNVRFPDGQIWKPDILLYNSADERFDAT 125
Query: 150 IMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLK 205
T +++ G + PP I+KS C IDV +FPFDVQ C +KFGSW+Y G+++DL+
Sbjct: 126 FHTNVLVNASGHCQYLPPGIFKSSCYIDVRWFPFDVQQCKLKFGSWSYGGWSLDLQ 181
>RGD|2348 [details] [associations]
symbol:Chrna7 "cholinergic receptor, nicotinic, alpha 7 (neuronal)"
species:10116 "Rattus norvegicus" [GO:0000187 "activation of MAPK
activity" evidence=ISO] [GO:0001540 "beta-amyloid binding"
evidence=ISO] [GO:0001666 "response to hypoxia" evidence=ISO]
[GO:0001988 "positive regulation of heart rate involved in
baroreceptor response to decreased systemic arterial blood pressure"
evidence=IEA;ISO] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=ISO;IMP;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=ISO;IDA] [GO:0005892
"acetylcholine-gated channel complex" evidence=ISO;IDA;TAS]
[GO:0006811 "ion transport" evidence=ISO] [GO:0006812 "cation
transport" evidence=ISO] [GO:0006816 "calcium ion transport"
evidence=ISO;IMP] [GO:0006874 "cellular calcium ion homeostasis"
evidence=ISO] [GO:0006897 "endocytosis" evidence=IEA;ISO] [GO:0007165
"signal transduction" evidence=ISO] [GO:0007271 "synaptic
transmission, cholinergic" evidence=ISO;IMP] [GO:0007613 "memory"
evidence=IEA;ISO] [GO:0008144 "drug binding" evidence=IDA]
[GO:0008179 "adenylate cyclase binding" evidence=IPI] [GO:0008284
"positive regulation of cell proliferation" evidence=ISO] [GO:0008306
"associative learning" evidence=IEA;ISO] [GO:0009897 "external side
of plasma membrane" evidence=IEA;ISO] [GO:0014061 "regulation of
norepinephrine secretion" evidence=IEA;ISO] [GO:0014069 "postsynaptic
density" evidence=IDA] [GO:0015464 "acetylcholine receptor activity"
evidence=ISO] [GO:0015643 "toxic substance binding" evidence=ISO]
[GO:0016020 "membrane" evidence=ISO] [GO:0016324 "apical plasma
membrane" evidence=IEA;ISO] [GO:0017081 "chloride channel regulator
activity" evidence=ISO] [GO:0019228 "regulation of action potential
in neuron" evidence=IDA;IMP] [GO:0019901 "protein kinase binding"
evidence=IPI] [GO:0030054 "cell junction" evidence=IEA] [GO:0030317
"sperm motility" evidence=IEA;ISO] [GO:0030424 "axon" evidence=IDA]
[GO:0030425 "dendrite" evidence=IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0032094 "response to food" evidence=IEA;ISO]
[GO:0032225 "regulation of synaptic transmission, dopaminergic"
evidence=IEA;ISO] [GO:0032279 "asymmetric synapse" evidence=IDA]
[GO:0032691 "negative regulation of interleukin-1 beta production"
evidence=IEA;ISO] [GO:0032715 "negative regulation of interleukin-6
production" evidence=IEA;ISO] [GO:0032720 "negative regulation of
tumor necrosis factor production" evidence=IEA;ISO] [GO:0034220 "ion
transmembrane transport" evidence=ISO] [GO:0035094 "response to
nicotine" evidence=ISO] [GO:0035095 "behavioral response to nicotine"
evidence=IEA;ISO] [GO:0042110 "T cell activation" evidence=IEA;ISO]
[GO:0042113 "B cell activation" evidence=IEA;ISO] [GO:0042166
"acetylcholine binding" evidence=ISO;IDA;IMP] [GO:0042221 "response
to chemical stimulus" evidence=ISO] [GO:0042391 "regulation of
membrane potential" evidence=ISO;IMP;IDA] [GO:0042416 "dopamine
biosynthetic process" evidence=IEP] [GO:0042698 "ovulation cycle"
evidence=ISO] [GO:0042734 "presynaptic membrane" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043197 "dendritic
spine" evidence=IDA] [GO:0043198 "dendritic shaft" evidence=IDA]
[GO:0045121 "membrane raft" evidence=IDA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0045471 "response to ethanol"
evidence=ISO] [GO:0045766 "positive regulation of angiogenesis"
evidence=ISO] [GO:0048149 "behavioral response to ethanol"
evidence=IEA;ISO] [GO:0050727 "regulation of inflammatory response"
evidence=ISO] [GO:0050728 "negative regulation of inflammatory
response" evidence=IEA;ISO] [GO:0050890 "cognition" evidence=ISO]
[GO:0051117 "ATPase binding" evidence=IDA] [GO:0060112 "generation of
ovulation cycle rhythm" evidence=IEA;ISO] [GO:0097110 "scaffold
protein binding" evidence=IDA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 RGD:2348
GO:GO:0005737 GO:GO:0014069 GO:GO:0008144 GO:GO:0043198 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0043025
GO:GO:0032279 GO:GO:0042734 GO:GO:0007271 GO:GO:0045121 GO:GO:0030426
GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889 HOGENOM:HOG000006756
eggNOG:NOG235631 GO:GO:0005892 GO:GO:0006816 CTD:1139 KO:K04809
GO:GO:0042416 GO:GO:0019228 EMBL:S53987 EMBL:L31619 EMBL:AY574256
IPI:IPI00607154 PIR:T01378 RefSeq:NP_036964.3 UniGene:Rn.9698
ProteinModelPortal:Q05941 SMR:Q05941 IntAct:Q05941 STRING:Q05941
PhosphoSite:Q05941 GeneID:25302 KEGG:rno:25302 UCSC:RGD:2348
BindingDB:Q05941 ChEMBL:CHEMBL4980 NextBio:606083 ArrayExpress:Q05941
Genevestigator:Q05941 GermOnline:ENSRNOG00000010853 Uniprot:Q05941
Length = 502
Score = 688 (247.2 bits), Expect = 9.2e-68, P = 9.2e-68
Identities = 130/292 (44%), Positives = 183/292 (62%)
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
KNQ++TTN+W+ W D+ L+W+ EY GV + P IW PDI+LYN+AD ++ T
Sbjct: 68 KNQVLTTNIWLQMSWTDHYLQWNMSEYPGVKNVRFPDGQIWKPDILLYNSADERFDATFH 127
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
T +++ G + PP I+KS C IDV +FPFDVQ C +KFGSW+Y G+++DL+ +Q
Sbjct: 128 TNVLVNASGHCQYLPPGIFKSSCYIDVRWFPFDVQQCKLKFGSWSYGGWSLDLQ--MQEA 185
Query: 212 DSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVN 271
D + Y + EWD+M +P RNEKFY CC+EPYPD+ + +T+RR+TL+Y +N
Sbjct: 186 D---------ISSYIPNGEWDLMGIPGKRNEKFYECCKEPYPDVTYTVTMRRRTLYYGLN 236
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
L+IPCV IS L++LVF LP+DSGEK+SL AEI+P TS +VPL+ +Y
Sbjct: 237 LLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQY 296
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
TMI+V LSVVVT+ VL + P M W + + L ++RP
Sbjct: 297 FASTMIIVGLSVVVTVIVLRYHHHDPDGGKMPKWTRIILLNWCAWFLRMKRP 348
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 76/176 (43%), Positives = 110/176 (62%)
Query: 30 QGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQ 89
QG + +RLY +L+ NYN L RPV N+S LTV L L Q+++V+ KNQ++TTN+W+
Sbjct: 22 QGEFQ-RRLYKELVKNYNPLERPVANDSQPLTVYFSLSLLQIMDVDEKNQVLTTNIWLQM 80
Query: 90 NLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVT 149
+ W D+ L+W+ EY GV + P IW PDI+LYN+AD ++ T
Sbjct: 81 S---------------WTDHYLQWNMSEYPGVKNVRFPDGQIWKPDILLYNSADERFDAT 125
Query: 150 IMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLK 205
T +++ G + PP I+KS C IDV +FPFDVQ C +KFGSW+Y G+++DL+
Sbjct: 126 FHTNVLVNASGHCQYLPPGIFKSSCYIDVRWFPFDVQQCKLKFGSWSYGGWSLDLQ 181
>UNIPROTKB|Q03481 [details] [associations]
symbol:LOC396120 "Alpha8 subunit of nicotinic acetylcholine
receptor" species:9031 "Gallus gallus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 GeneTree:ENSGT00630000089708 eggNOG:NOG235631
OrthoDB:EOG483D4K OMA:QGESQRR HSSP:P22770 EMBL:AADN02065926
EMBL:AADN02065927 EMBL:AADN02065928 EMBL:AADN02065929
EMBL:AADN02065930 EMBL:AADN02065931 EMBL:AADN02065932
EMBL:AADN02065933 EMBL:AADN02065934 EMBL:AADN02065935 EMBL:X52296
IPI:IPI00572070 PIR:JH0173 RefSeq:NP_990532.1 UniGene:Gga.664
Ensembl:ENSGALT00000024751 GeneID:396120 KEGG:gga:396120
InParanoid:Q03481 ChEMBL:CHEMBL1628466 NextBio:20816178
Uniprot:Q03481
Length = 511
Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
Identities = 139/336 (41%), Positives = 202/336 (60%)
Query: 48 RLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWE 107
RL R + N ++L + + SQ I V L+ ++ ++ + KNQ++ TN W+ W
Sbjct: 36 RLYRDLLRNYNRLERPV-MNDSQPIVVELQLSLLQI---IDVDEKNQVLITNAWLQMYWV 91
Query: 108 DYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPP 167
D L W EY GV L PS+ IW+PDI+LYN+AD ++ T T +++Y G + PP
Sbjct: 92 DIYLSWDQYEYPGVQNLRFPSDQIWVPDILLYNSADERFDATFHTNVLVNYSGSCQYIPP 151
Query: 168 AIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYL 227
I KS C IDV +FPFDVQ C +KFGSWT+ G+ +DL+ +L+ D+ +Y
Sbjct: 152 GILKSTCYIDVRWFPFDVQKCDLKFGSWTHSGWLIDLQ-MLEA----------DISNYIS 200
Query: 228 SVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVF 287
+ EWD++ VP RNE +Y CC+EPYPD+ + IT+RR+TL+Y +NL+IPCV IS L++LVF
Sbjct: 201 NGEWDLVGVPGKRNELYYECCKEPYPDVTYTITMRRRTLYYGLNLLIPCVLISGLALLVF 260
Query: 288 YLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTI 347
LP+DSGEK+SL AEI+P TS +VPL+ +Y M++V LSVVVT+
Sbjct: 261 LLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASIMVIVGLSVVVTV 320
Query: 348 AVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
VL + P M WV + + L +++P
Sbjct: 321 LVLQFHHHDPQAGKMPRWVRVILLNWCAWFLRMKKP 356
Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
Identities = 90/205 (43%), Positives = 123/205 (60%)
Query: 15 LFPSLTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEV 74
L+ SL FL F + QG + +RLY DLL NYNRL RPV N+S + V++ L L Q+I+V
Sbjct: 16 LWASL-FLSFFKVSQQGESQ-RRLYRDLLRNYNRLERPVMNDSQPIVVELQLSLLQIIDV 73
Query: 75 NLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLP 134
+ KNQ++ TN W+ W D L W EY GV L PS+ IW+P
Sbjct: 74 DEKNQVLITNAWLQMY---------------WVDIYLSWDQYEYPGVQNLRFPSDQIWVP 118
Query: 135 DIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGS 194
DI+LYN+AD ++ T T +++Y G + PP I KS C IDV +FPFDVQ C +KFGS
Sbjct: 119 DILLYNSADERFDATFHTNVLVNYSGSCQYIPPGILKSTCYIDVRWFPFDVQKCDLKFGS 178
Query: 195 WTYDGYTVDLKHILQGPDSDKIDIG 219
WT+ G+ +DL+ +L+ S+ I G
Sbjct: 179 WTHSGWLIDLQ-MLEADISNYISNG 202
>UNIPROTKB|P04758 [details] [associations]
symbol:CHRNB1 "Acetylcholine receptor subunit beta"
species:9913 "Bos taurus" [GO:0001941 "postsynaptic membrane
organization" evidence=ISS] [GO:0006812 "cation transport"
evidence=ISS] [GO:0006936 "muscle contraction" evidence=ISS]
[GO:0007165 "signal transduction" evidence=ISS] [GO:0007271
"synaptic transmission, cholinergic" evidence=ISS] [GO:0007274
"neuromuscular synaptic transmission" evidence=ISS] [GO:0035095
"behavioral response to nicotine" evidence=ISS] [GO:0048747 "muscle
fiber development" evidence=ISS] [GO:0050877 "neurological system
process" evidence=ISS] [GO:0015267 "channel activity" evidence=ISS]
[GO:0015464 "acetylcholine receptor activity" evidence=ISS]
[GO:0005892 "acetylcholine-gated channel complex" evidence=ISS]
[GO:0045202 "synapse" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0042391 "regulation of membrane
potential" evidence=IEA] [GO:0042166 "acetylcholine binding"
evidence=IEA] [GO:0004889 "acetylcholine-activated cation-selective
channel activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0007165 GO:GO:0035095 GO:GO:0030054
GO:GO:0045211 GO:GO:0006812 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007274
GO:GO:0045202 GO:GO:0007271 GO:GO:0042391 GO:GO:0042166
HOVERGEN:HBG003756 GO:GO:0004889 GO:GO:0005892 GO:GO:0015464
HOGENOM:HOG000006757 GeneTree:ENSGT00620000087691 EMBL:X00962
EMBL:BC147876 IPI:IPI00691448 PIR:S07227 RefSeq:NP_776941.1
UniGene:Bt.5107 ProteinModelPortal:P04758 SMR:P04758 STRING:P04758
Ensembl:ENSBTAT00000025624 GeneID:282179 KEGG:bta:282179 CTD:1140
eggNOG:NOG243276 InParanoid:P04758 KO:K04812 OMA:FIDGPNR
OrthoDB:EOG4DFPNC NextBio:20806008 GO:GO:0015267 GO:GO:0006936
GO:GO:0048747 GO:GO:0001941 Uniprot:P04758
Length = 505
Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
Identities = 138/358 (38%), Positives = 212/358 (59%)
Query: 29 AQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVN 88
A+G++ RL + L S Y+ +RP D++ V +GL L+QLI +N K++ M+T V+++
Sbjct: 22 ARGSEAEGRLREKLFSGYDSTVRPAREVGDRVWVSIGLTLAQLISLNEKDEEMSTKVYLD 81
Query: 89 QNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEV 148
EW DY+L W PEE+ G+D+L + +E +WLPD+VL NN DGN++V
Sbjct: 82 L---------------EWTDYRLSWDPEEHEGIDSLRISAESVWLPDVVLLNNNDGNFDV 126
Query: 149 TIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHIL 208
+ ++ DG + W PP IY+S C I V YFPFD Q C M F S++YD V L+ L
Sbjct: 127 ALDINVVVSSDGSMRWQPPGIYRSSCSIQVTYFPFDWQNCTMVFSSYSYDSSEVSLQTGL 186
Query: 209 QGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCC---EEPYPDIIFNITLRRKT 265
++ ++ I + + +W+I+ P+ + E ++ F + +RRK
Sbjct: 187 SPEGQERQEVYIHEGTFIENGQWEIIHKPSRLIQPSVDPRGGGEGRREEVTFYLIIRRKP 246
Query: 266 LFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTV 325
LFY VN+I PC+ I+ L++ VFYLP D+GEK+ L A+ +P TSL+V
Sbjct: 247 LFYLVNVIAPCILITLLAIFVFYLPPDAGEKMGLSIFALLTLTVFLLLLADKVPETSLSV 306
Query: 326 PLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
P++ KYL+FTM+LVT SV++++ VLN++ RSP TH M WV ++FI LP L ++RP
Sbjct: 307 PIIIKYLMFTMVLVTFSVILSVVVLNLHHRSPHTHQMPLWVRQIFIHKLPLYLGLKRP 364
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 26/58 (44%), Positives = 39/58 (67%)
Query: 500 LARLASIHFCD--LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
LA+L S++ D + T + EW DY+L W PEE+ G+D+L + +E +WLPD+VL N
Sbjct: 61 LAQLISLNEKDEEMSTKVYLDLEWTDYRLSWDPEEHEGIDSLRISAESVWLPDVVLLN 118
>RGD|2349 [details] [associations]
symbol:Chrnb1 "cholinergic receptor, nicotinic, beta 1 (muscle)"
species:10116 "Rattus norvegicus" [GO:0001941 "postsynaptic membrane
organization" evidence=IEA;ISO] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=ISO;IDA] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0005892 "acetylcholine-gated
channel complex" evidence=IEA;ISO] [GO:0006812 "cation transport"
evidence=ISO] [GO:0006936 "muscle contraction" evidence=IEA;ISO]
[GO:0007165 "signal transduction" evidence=ISO] [GO:0007271 "synaptic
transmission, cholinergic" evidence=IEA;ISO] [GO:0007274
"neuromuscular synaptic transmission" evidence=IEA;ISO] [GO:0015267
"channel activity" evidence=ISO] [GO:0015276 "ligand-gated ion
channel activity" evidence=IDA] [GO:0015464 "acetylcholine receptor
activity" evidence=IEA;ISO] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034220 "ion transmembrane transport" evidence=ISO] [GO:0035095
"behavioral response to nicotine" evidence=IEA;ISO] [GO:0042166
"acetylcholine binding" evidence=IEA;ISO] [GO:0042391 "regulation of
membrane potential" evidence=IEA;ISO] [GO:0045202 "synapse"
evidence=ISO] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0048747 "muscle fiber development" evidence=IEA;ISO] [GO:0050877
"neurological system process" evidence=ISO] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 RGD:2349 GO:GO:0035095 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007274 GO:GO:0007271
GO:GO:0042391 GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889
GO:GO:0005892 GO:GO:0015464 HOGENOM:HOG000006757
GeneTree:ENSGT00620000087691 CTD:1140 eggNOG:NOG243276 KO:K04812
OMA:FIDGPNR OrthoDB:EOG4DFPNC GO:GO:0006936 GO:GO:0048747
GO:GO:0001941 EMBL:X74833 IPI:IPI00215165 PIR:S13873
RefSeq:NP_036660.1 UniGene:Rn.44611 ProteinModelPortal:P25109
SMR:P25109 STRING:P25109 PRIDE:P25109 Ensembl:ENSRNOT00000019947
GeneID:24261 KEGG:rno:24261 UCSC:RGD:2349 InParanoid:P25109
BindingDB:P25109 ChEMBL:CHEMBL2666 NextBio:602809
Genevestigator:P25109 GermOnline:ENSRNOG00000014698 Uniprot:P25109
Length = 501
Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
Identities = 142/361 (39%), Positives = 216/361 (59%)
Query: 29 AQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVN 88
A+G++ +L L S+Y+ +RP D++ V +GL L+QLI +N K++ M+T V+++
Sbjct: 21 ARGSEAEGQLLKKLFSDYDSSVRPAQEVGDRVGVSIGLTLAQLISLNEKDEEMSTKVYLD 80
Query: 89 QNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEV 148
EW DY+L W P E+ G+++L V +E +WLPD+VL NN DGN++V
Sbjct: 81 L---------------EWTDYRLSWDPAEHDGIESLRVTAESVWLPDVVLLNNNDGNFDV 125
Query: 149 TIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHIL 208
+ ++ ++G V W PP +Y+S C I V YFPFD Q C M F S++YD V LK
Sbjct: 126 ALDINVVVSFEGSVRWQPPGLYRSSCSIQVTYFPFDWQNCTMVFSSYSYDSSEVSLK--- 182
Query: 209 QGPDSD---KIDIGIDLQDYYLSVEWDIMKVPA--VRNEKFYSCCEEPY-PDIIFNITLR 262
GPD D + +I I + + +W+I+ P+ + +E + ++IF + +R
Sbjct: 183 TGPDPDGQERQEIYIHEGTFIENGQWEIIHKPSRLIHLPGDRRGGKEGHREEVIFYLIIR 242
Query: 263 RKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTS 322
RK LFY VN+I PC+ I+ L++ VFYLP D+GEK+ L A+ +P TS
Sbjct: 243 RKPLFYLVNVIAPCILITLLAIFVFYLPPDAGEKMGLSIFALLTLTVFLLLLADKVPETS 302
Query: 323 LTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQR 382
L VP++ KYL+FTMILVT SV++++ VLN++ RSP TH M WV ++FI LP L ++R
Sbjct: 303 LAVPIIIKYLMFTMILVTFSVILSVVVLNLHHRSPHTHQMPFWVRQIFIHKLPPYLGLKR 362
Query: 383 P 383
P
Sbjct: 363 P 363
Score = 135 (52.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 500 LARLASIHFCD--LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
LA+L S++ D + T + EW DY+L W P E+ G+++L V +E +WLPD+VL N
Sbjct: 60 LAQLISLNEKDEEMSTKVYLDLEWTDYRLSWDPAEHDGIESLRVTAESVWLPDVVLLN 117
>UNIPROTKB|F1PU41 [details] [associations]
symbol:CHRNA7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00630000089708 OMA:AGPPATN EMBL:AAEX03002211
EMBL:AAEX03002212 EMBL:AAEX03002213 EMBL:AAEX03002214
EMBL:AAEX03002215 Ensembl:ENSCAFT00000016296 Uniprot:F1PU41
Length = 440
Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
Identities = 130/292 (44%), Positives = 184/292 (63%)
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
KNQ++TTN+W+ W D+ L+W+ EY GV T+ P IW PDI+LYN+AD ++ T
Sbjct: 6 KNQVLTTNIWLQMSWTDHYLQWNMSEYPGVKTVRFPDGLIWKPDILLYNSADERFDATFH 65
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
T +++ G + PP I+KS C IDV +FPFDVQ C +KFGSW+Y G+++DL+ +Q
Sbjct: 66 TNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQQCKLKFGSWSYGGWSLDLQ--MQEA 123
Query: 212 DSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVN 271
D + Y + EWD++ +P R+EKFY CC+EPYPD+ F +T+RR+TL+Y +N
Sbjct: 124 D---------ISGYIPNGEWDLVGIPGKRSEKFYECCKEPYPDVTFTVTIRRRTLYYGLN 174
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
L+IPCV IS L++LVF LP+DSGEK+SL AEI+P TS +VPL+ +Y
Sbjct: 175 LLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQY 234
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
TMI+V LSVVVT+ VL + P M W + + L ++RP
Sbjct: 235 FASTMIIVGLSVVVTVIVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRMKRP 286
>WB|WBGene00000055 [details] [associations]
symbol:acr-16 species:6239 "Caenorhabditis elegans"
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0040011
"locomotion" evidence=IMP] [GO:0042995 "cell projection"
evidence=IDA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0040011 GO:GO:0004889
HOGENOM:HOG000006756 GeneTree:ENSGT00630000089708 EMBL:X83887
EMBL:FO080489 EMBL:AY523511 PIR:S68588 RefSeq:NP_001023847.1
RefSeq:NP_505207.1 UniGene:Cel.18045 ProteinModelPortal:P48180
SMR:P48180 PaxDb:P48180 EnsemblMetazoa:F25G6.3a GeneID:179235
KEGG:cel:CELE_F25G6.3 UCSC:F25G6.3a.1 CTD:179235 WormBase:F25G6.3a
WormBase:F25G6.3b eggNOG:NOG235631 InParanoid:P48180 KO:K05312
OMA:VANHSEP NextBio:904496 GO:GO:0042995 Uniprot:P48180
Length = 498
Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
Identities = 129/315 (40%), Positives = 190/315 (60%)
Query: 69 SQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPS 128
S+ + V+LK + ++ + KNQ++ N W++ W DY L W EYG + + P+
Sbjct: 45 SEPVTVHLKVALQQI---IDVDEKNQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPA 101
Query: 129 EHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTC 188
IW PD++LYN+ D N++ T T I++ G V W PP I+K C+ID+++FPFD Q C
Sbjct: 102 GKIWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHWVPPGIFKISCKIDIQWFPFDEQKC 161
Query: 189 VMKFGSWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCC 248
KFGSWTYDGY +DL+ P + G D+ +Y + EW + RNEKFY CC
Sbjct: 162 FFKFGSWTYDGYKLDLQ-----PATG----GFDISEYISNGEWALPLTTVERNEKFYDCC 212
Query: 249 EEPYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXX 308
EPYPD+ F + +RR+TL+Y NLI+PC+ + +++L F LP D+GEK++L
Sbjct: 213 PEPYPDVHFYLHMRRRTLYYGFNLIMPCILTTLMTLLGFTLPPDAGEKITLQITVLLSIC 272
Query: 309 XXXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHK 368
+E+ PPTS VPLLG + MI+VT S V T+ VLN+++R+P TH M PW
Sbjct: 273 FFLSIVSEMSPPTSEAVPLLGIFFTCCMIVVTASTVFTVYVLNLHYRTPETHDMGPWTRN 332
Query: 369 VFIEVLPKILFIQRP 383
+ + +P IL ++RP
Sbjct: 333 LLLYWIPWILRMKRP 347
Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
Identities = 86/204 (42%), Positives = 123/204 (60%)
Query: 20 TFLVFSVIIAQ---GNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNL 76
T L+ I+A G+ + +RLY+DL+ NYN L RPV N+S+ +TV + + L Q+I+V+
Sbjct: 5 TLLISCAILAAPTLGSLQERRLYEDLMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDE 64
Query: 77 KNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDI 136
KNQ+ V+VN W++ W DY L W EYG + + P+ IW PD+
Sbjct: 65 KNQV----VYVN-----------AWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDV 109
Query: 137 VLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWT 196
+LYN+ D N++ T T I++ G V W PP I+K C+ID+++FPFD Q C KFGSWT
Sbjct: 110 LLYNSVDTNFDSTYQTNMIVYSTGLVHWVPPGIFKISCKIDIQWFPFDEQKCFFKFGSWT 169
Query: 197 YDGYTVDLKHILQGPD-SDKIDIG 219
YDGY +DL+ G D S+ I G
Sbjct: 170 YDGYKLDLQPATGGFDISEYISNG 193
>UNIPROTKB|P36544 [details] [associations]
symbol:CHRNA7 "Neuronal acetylcholine receptor subunit
alpha-7" species:9606 "Homo sapiens" [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0000187 "activation of MAPK activity" evidence=IDA] [GO:0005892
"acetylcholine-gated channel complex" evidence=IDA] [GO:0006816
"calcium ion transport" evidence=IDA;IMP] [GO:0006811 "ion
transport" evidence=NAS] [GO:0050890 "cognition" evidence=NAS;IMP]
[GO:0015643 "toxic substance binding" evidence=IDA] [GO:0032720
"negative regulation of tumor necrosis factor production"
evidence=IDA;IMP] [GO:0007165 "signal transduction" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA;TAS] [GO:0006874
"cellular calcium ion homeostasis" evidence=IMP] [GO:0045766
"positive regulation of angiogenesis" evidence=IMP] [GO:0015464
"acetylcholine receptor activity" evidence=IDA] [GO:0001666
"response to hypoxia" evidence=IDA] [GO:0035094 "response to
nicotine" evidence=IDA] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IDA] [GO:0016021
"integral to membrane" evidence=NAS] [GO:0008284 "positive
regulation of cell proliferation" evidence=IMP] [GO:0001540
"beta-amyloid binding" evidence=IPI] [GO:0007613 "memory"
evidence=NAS] [GO:0042166 "acetylcholine binding" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0017081 "chloride channel regulator activity" evidence=IDA]
[GO:0042221 "response to chemical stimulus" evidence=IDA]
[GO:0007268 "synaptic transmission" evidence=TAS]
Reactome:REACT_13685 InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0042803 GO:GO:0008284 GO:GO:0007613
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0001666
GO:GO:0000187 GO:GO:0045766 GO:GO:0001540 GO:GO:0042166
HOVERGEN:HBG003756 GO:GO:0004889 HOGENOM:HOG000006756
DrugBank:DB00184 eggNOG:NOG235631 GO:GO:0005892 GO:GO:0015464
GO:GO:0035094 GO:GO:0006816 DrugBank:DB01273 CTD:1139 KO:K04809
OrthoDB:EOG483D4K GO:GO:0017081 GO:GO:0015643 GO:GO:0006874
GO:GO:0032720 EMBL:X70297 EMBL:U40583 EMBL:U62436 EMBL:Y08420
EMBL:AF385585 EMBL:AK292069 EMBL:AK294229 EMBL:AC004460
EMBL:AC009562 EMBL:AC012236 EMBL:AC021316 EMBL:AC026150
EMBL:AC026951 EMBL:AC058803 EMBL:AC068448 EMBL:AC079969
EMBL:AC087481 EMBL:AC090829 EMBL:AC091057 EMBL:AC104266
EMBL:AC104759 EMBL:BC037571 EMBL:BC101345 EMBL:L25827 EMBL:Z23141
EMBL:AF332758 IPI:IPI00003858 IPI:IPI00942337 PIR:G02259 PIR:I37185
RefSeq:NP_000737.1 RefSeq:NP_001177384.1 RefSeq:NP_683709.1
UniGene:Hs.510853 UniGene:Hs.511772 UniGene:Hs.713151
ProteinModelPortal:P36544 SMR:P36544 IntAct:P36544 STRING:P36544
TCDB:1.A.9.1.1 PhosphoSite:P36544 DMDM:2506127 PRIDE:P36544
Ensembl:ENST00000306901 Ensembl:ENST00000454250
Ensembl:ENST00000455693 GeneID:1139 GeneID:89832 KEGG:hsa:1139
KEGG:hsa:89832 UCSC:uc001zft.3 CTD:89832 GeneCards:GC15P032322
HGNC:HGNC:1960 HPA:CAB033624 HPA:HPA029422 MIM:118511
neXtProt:NX_P36544 Orphanet:199318 PharmGKB:PA114 PharmGKB:PA26483
InParanoid:P36544 OMA:AGPPATN PhylomeDB:P36544 BindingDB:P36544
ChEMBL:CHEMBL2492 GenomeRNAi:1139 NextBio:4738 ArrayExpress:P36544
Bgee:P36544 CleanEx:HS_CHRNA7 Genevestigator:P36544
GermOnline:ENSG00000175344 Uniprot:P36544
Length = 502
Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
Identities = 129/292 (44%), Positives = 184/292 (63%)
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
KNQ++TTN+W+ W D+ L+W+ EY GV T+ P IW PDI+LYN+AD ++ T
Sbjct: 68 KNQVLTTNIWLQMSWTDHYLQWNVSEYPGVKTVRFPDGQIWKPDILLYNSADERFDATFH 127
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
T +++ G + PP I+KS C IDV +FPFDVQ C +KFGSW+Y G+++DL+ +Q
Sbjct: 128 TNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQHCKLKFGSWSYGGWSLDLQ--MQEA 185
Query: 212 DSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVN 271
D + Y + EWD++ +P R+E+FY CC+EPYPD+ F +T+RR+TL+Y +N
Sbjct: 186 D---------ISGYIPNGEWDLVGIPGKRSERFYECCKEPYPDVTFTVTMRRRTLYYGLN 236
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
L+IPCV IS L++LVF LP+DSGEK+SL AEI+P TS +VPL+ +Y
Sbjct: 237 LLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQY 296
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
TMI+V LSVVVT+ VL + P M W + + L ++RP
Sbjct: 297 FASTMIIVGLSVVVTVIVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRMKRP 348
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 77/176 (43%), Positives = 110/176 (62%)
Query: 30 QGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQ 89
QG + K LY +L+ NYN L RPV N+S LTV L L Q+++V+ KNQ++TTN+W+
Sbjct: 22 QGEFQRK-LYKELVKNYNPLERPVANDSQPLTVYFSLSLLQIMDVDEKNQVLTTNIWLQM 80
Query: 90 NLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVT 149
+ W D+ L+W+ EY GV T+ P IW PDI+LYN+AD ++ T
Sbjct: 81 S---------------WTDHYLQWNVSEYPGVKTVRFPDGQIWKPDILLYNSADERFDAT 125
Query: 150 IMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLK 205
T +++ G + PP I+KS C IDV +FPFDVQ C +KFGSW+Y G+++DL+
Sbjct: 126 FHTNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQHCKLKFGSWSYGGWSLDLQ 181
>ZFIN|ZDB-GENE-070821-4 [details] [associations]
symbol:chrnb1 "cholinergic receptor, nicotinic, beta
1 (muscle)" species:7955 "Danio rerio" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007271 "synaptic
transmission, cholinergic" evidence=IDA] [GO:0015464 "acetylcholine
receptor activity" evidence=IDA] [GO:0005892 "acetylcholine-gated
channel complex" evidence=IDA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 ZFIN:ZDB-GENE-070821-4 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007271 GO:GO:0004889
GO:GO:0005892 EMBL:JN236210 UniGene:Dr.111371 Uniprot:G3KGY2
Length = 492
Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
Identities = 140/347 (40%), Positives = 202/347 (58%)
Query: 37 RLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIM 96
+L L S YN +RP N +++ V++G+ LS + +N+K++ M T V +N
Sbjct: 28 KLMKKLFSAYNSKVRPARNPEERVVVRIGMILSSFVSLNMKDEEMNTIVMMNL------- 80
Query: 97 TTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAIL 156
EW DY+L W+P++YGGVD L + S +WLPDIVL NN DG + V +
Sbjct: 81 --------EWNDYRLSWNPKDYGGVDVLRISSGKVWLPDIVLINNNDGVFGVALQVHVQA 132
Query: 157 HYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSDKI 216
+ +G+V W PPA+YKS C + V YFPFD Q C M F S+TYD VDL+H L +
Sbjct: 133 YSNGRVTWTPPALYKSSCGVKVTYFPFDWQNCTMVFRSYTYDSSEVDLQHALDKRGKEIK 192
Query: 217 DIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLIIPC 276
+I +D + S EW I + +N + E+ Y DI F + + RK +FY VN+++PC
Sbjct: 193 EIILDT-GFSESGEWHIRHKVSRKNVR-----EDLYEDITFYLIIERKPMFYVVNIVLPC 246
Query: 277 VGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLFTM 336
+ I+ +++ FYLP D+GEK+ L A IP TSL VP++ YL+ TM
Sbjct: 247 ILITIIAIFNFYLPPDAGEKMGLSINVLLTLTVFLLLLANKIPETSLGVPIIVNYLMITM 306
Query: 337 ILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
ILVT SV++++ VLN++ RSP TH M WV K+FI +LP L + RP
Sbjct: 307 ILVTFSVILSVVVLNLHHRSPNTHQMPLWVRKIFIHMLPPYLGMLRP 353
Score = 141 (54.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 22/36 (61%), Positives = 28/36 (77%)
Query: 520 EWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
EW DY+L W+P++YGGVD L + S +WLPDIVL N
Sbjct: 81 EWNDYRLSWNPKDYGGVDVLRISSGKVWLPDIVLIN 116
>WB|WBGene00000050 [details] [associations]
symbol:acr-11 species:6239 "Caenorhabditis elegans"
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007268
"synaptic transmission" evidence=IMP] [GO:0045202 "synapse"
evidence=IC] [GO:0015464 "acetylcholine receptor activity"
evidence=ISS] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HSSP:P02711 GO:GO:0045202
GO:GO:0004889 HOGENOM:HOG000006756 GeneTree:ENSGT00630000089708
KO:K05312 GO:GO:0015464 EMBL:FO081014 PIR:T25671 RefSeq:NP_491906.1
UniGene:Cel.28710 ProteinModelPortal:P91197 SMR:P91197
EnsemblMetazoa:D2092.3 GeneID:191599 KEGG:cel:CELE_D2092.3
UCSC:D2092.3 CTD:191599 WormBase:D2092.3 eggNOG:NOG329197
InParanoid:P91197 OMA:QGESQRR NextBio:949624 Uniprot:P91197
Length = 461
Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
Identities = 129/317 (40%), Positives = 196/317 (61%)
Query: 69 SQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVP- 127
SQ +EV +K + + ++ + KNQI++ N W++ W D+KL+W P++YGG+ + P
Sbjct: 48 SQPLEVKIK--LFLQQI-LDVDEKNQIVSVNAWLSYTWFDHKLQWEPKKYGGIQDIRFPG 104
Query: 128 -SEHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQ 186
S+HIW PD++LYN+A +++ T + + ++ G VVW PP + K C++DV +FPFD Q
Sbjct: 105 SSDHIWKPDVLLYNSAAEDFDSTFKSNLLTYHTGTVVWIPPGVLKFVCQLDVTWFPFDDQ 164
Query: 187 TCVMKFGSWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYS 246
C MKFGSWT+ GY +DL Q D +DL Y ++ EW ++ A R +Y
Sbjct: 165 VCEMKFGSWTFHGYAIDL----QIDDDTNGTQSMDLSTYLVNGEWQVISTNAKRVVSYYK 220
Query: 247 CCEEPYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXX 306
CC EPYP + + + +RR+TL+Y NLIIP + IS +++L F P D+GEK++L
Sbjct: 221 CCPEPYPTVNYYLHIRRRTLYYGFNLIIPSLLISLMAILGFMFPPDAGEKITLEVTILLA 280
Query: 307 XXXXXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWV 366
+E+ PPTS VPL+G + M++V+ SVV TI VLN++FRS +H M P V
Sbjct: 281 IVFFLSMVSEMTPPTSEAVPLIGVFFSCCMLVVSASVVFTIVVLNLHFRSADSHEMNPLV 340
Query: 367 HKVFIEVLPKILFIQRP 383
+V +E LP +LF+ RP
Sbjct: 341 RRVLLEFLPWLLFMSRP 357
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 75/189 (39%), Positives = 116/189 (61%)
Query: 19 LTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKN 78
L+ ++ + G+ +L+ DLL YN L RPV N+S L VK+ L L Q+++V+ KN
Sbjct: 10 LSLVIIHSNLCDGSVAETKLFTDLLKGYNPLERPVQNSSQPLEVKIKLFLQQILDVDEKN 69
Query: 79 QIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVP--SEHIWLPDI 136
QI++ N W++ W D+KL+W P++YGG+ + P S+HIW PD+
Sbjct: 70 QIVSVNAWLSYT---------------WFDHKLQWEPKKYGGIQDIRFPGSSDHIWKPDV 114
Query: 137 VLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWT 196
+LYN+A +++ T + + ++ G VVW PP + K C++DV +FPFD Q C MKFGSWT
Sbjct: 115 LLYNSAAEDFDSTFKSNLLTYHTGTVVWIPPGVLKFVCQLDVTWFPFDDQVCEMKFGSWT 174
Query: 197 YDGYTVDLK 205
+ GY +DL+
Sbjct: 175 FHGYAIDLQ 183
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 521 WEDYKLKWSPEEYGGVDTLHVP--SEHIWLPDIVLYN 555
W D+KL+W P++YGG+ + P S+HIW PD++LYN
Sbjct: 82 WFDHKLQWEPKKYGGIQDIRFPGSSDHIWKPDVLLYN 118
>UNIPROTKB|P11230 [details] [associations]
symbol:CHRNB1 "Acetylcholine receptor subunit beta"
species:9606 "Homo sapiens" [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0048747 "muscle fiber development" evidence=IMP] [GO:0042166
"acetylcholine binding" evidence=ISS] [GO:0007271 "synaptic
transmission, cholinergic" evidence=IMP] [GO:0006812 "cation
transport" evidence=IMP] [GO:0005887 "integral to plasma membrane"
evidence=NAS] [GO:0007165 "signal transduction" evidence=IMP]
[GO:0005892 "acetylcholine-gated channel complex" evidence=IMP]
[GO:0045202 "synapse" evidence=IMP] [GO:0015276 "ligand-gated ion
channel activity" evidence=ISS] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISS] [GO:0007274 "neuromuscular synaptic transmission"
evidence=IMP] [GO:0015464 "acetylcholine receptor activity"
evidence=IMP] [GO:0006936 "muscle contraction" evidence=IMP]
[GO:0035095 "behavioral response to nicotine" evidence=IMP]
[GO:0050877 "neurological system process" evidence=IMP] [GO:0042391
"regulation of membrane potential" evidence=ISS] [GO:0001941
"postsynaptic membrane organization" evidence=IMP] [GO:0015267
"channel activity" evidence=IMP] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0007165 GO:GO:0035095
GO:GO:0030054 GO:GO:0045211 GO:GO:0006812 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007274 GO:GO:0045202 GO:GO:0007271
GO:GO:0042391 GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889
GO:GO:0005892 MIM:601462 Orphanet:98913 HOGENOM:HOG000006757
CTD:1140 eggNOG:NOG243276 KO:K04812 OMA:FIDGPNR OrthoDB:EOG4DFPNC
GO:GO:0006936 GO:GO:0048747 GO:GO:0001941 EMBL:X14830 EMBL:BC011371
IPI:IPI00298986 PIR:S04607 RefSeq:NP_000738.2 UniGene:Hs.330386
ProteinModelPortal:P11230 SMR:P11230 IntAct:P11230 STRING:P11230
PhosphoSite:P11230 DMDM:21903373 PRIDE:P11230 DNASU:1140
Ensembl:ENST00000306071 GeneID:1140 KEGG:hsa:1140 UCSC:uc002ghb.3
GeneCards:GC17P007348 HGNC:HGNC:1961 HPA:CAB011200 HPA:HPA005822
MIM:100710 MIM:608931 neXtProt:NX_P11230 PharmGKB:PA26494
InParanoid:P11230 PhylomeDB:P11230 BindingDB:P11230
ChEMBL:CHEMBL3355 GenomeRNAi:1140 NextBio:4744 ArrayExpress:P11230
Bgee:P11230 CleanEx:HS_CHRNB1 Genevestigator:P11230
GermOnline:ENSG00000170175 GO:GO:0015276 Uniprot:P11230
Length = 501
Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
Identities = 142/358 (39%), Positives = 212/358 (59%)
Query: 30 QGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQ 89
+G++ RL + L S Y+ +RP D++ V +GL L+QLI +N K++ M+T V+++
Sbjct: 22 RGSEAEGRLREKLFSGYDSSVRPAREVGDRVRVSVGLILAQLISLNEKDEEMSTKVYLDL 81
Query: 90 NLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVT 149
EW DY+L W P E+ G+D+L + +E +WLPD+VL NN DGN++V
Sbjct: 82 ---------------EWTDYRLSWDPAEHDGIDSLRITAESVWLPDVVLLNNNDGNFDVA 126
Query: 150 IMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQ 209
+ ++ DG V W PP IY+S C I V YFPFD Q C M F S++YD V L+ L
Sbjct: 127 LDISVVVSSDGSVRWQPPGIYRSSCSIQVTYFPFDWQNCTMVFSSYSYDSSEVSLQTGL- 185
Query: 210 GPDSD-KIDIGIDLQDYYLSVEWDIMKVPAVRNEKF---YSCCEEPYPDIIFNITLRRKT 265
GPD +I I + + +W+I+ P+ + E ++IF + +RRK
Sbjct: 186 GPDGQGHQEIHIHEGTFIENGQWEIIHKPSRLIQPPGDPRGGREGQRQEVIFYLIIRRKP 245
Query: 266 LFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTV 325
LFY VN+I PC+ I+ L++ VFYLP D+GEK+ L A+ +P TSL+V
Sbjct: 246 LFYLVNVIAPCILITLLAIFVFYLPPDAGEKMGLSIFALLTLTVFLLLLADKVPETSLSV 305
Query: 326 PLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
P++ KYL+FTM+LVT SV++++ VLN++ RSP TH M WV ++FI LP L ++RP
Sbjct: 306 PIIIKYLMFTMVLVTFSVILSVVVLNLHHRSPHTHQMPLWVRQIFIHKLPLYLRLKRP 363
Score = 138 (53.6 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 500 LARLASIHFCD--LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
LA+L S++ D + T + EW DY+L W P E+ G+D+L + +E +WLPD+VL N
Sbjct: 60 LAQLISLNEKDEEMSTKVYLDLEWTDYRLSWDPAEHDGIDSLRITAESVWLPDVVLLN 117
>UNIPROTKB|F6XTV7 [details] [associations]
symbol:CHRNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087691 OMA:FIDGPNR EMBL:AAEX03003615
Ensembl:ENSCAFT00000025890 Uniprot:F6XTV7
Length = 587
Score = 679 (244.1 bits), Expect = 8.2e-67, P = 8.2e-67
Identities = 140/359 (38%), Positives = 209/359 (58%)
Query: 29 AQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVN 88
A+G + RL + L Y+ +RP D + V +GL L+QLI +N K++ M+T V+++
Sbjct: 104 ARGTEVEGRLREKLFLGYDSSVRPAREVGDSVGVSVGLSLAQLISLNEKDEEMSTKVYLD 163
Query: 89 QNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEV 148
EW DY+L W P EY G+D+L + + +WLPD+VL NN DGN++V
Sbjct: 164 L---------------EWTDYRLSWDPAEYEGIDSLRITAGSVWLPDVVLLNNNDGNFDV 208
Query: 149 TIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHIL 208
+ ++ DG V W PP +Y+S C I V YFPFD Q C M F S++YD V L H
Sbjct: 209 ALDLNVVVSSDGSVRWQPPGLYRSSCSIQVTYFPFDWQNCTMVFSSYSYDSSEVSL-HTG 267
Query: 209 QGPDSDKI-DIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCC---EEPYPDIIFNITLRRK 264
GPD ++ ++ I + + +W+I+ P+ + E ++ F + +RRK
Sbjct: 268 LGPDRQELQEVHIHEGTFIENGQWEIIHKPSRLVQPPVDPRRGGEGQRQEVTFYLIIRRK 327
Query: 265 TLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLT 324
LFY VN+I PC+ I+ L++ VFYLP D+GEK+ L A+ +P TSL+
Sbjct: 328 PLFYLVNVIAPCILITLLAIFVFYLPPDAGEKMGLSIFALLTLTVFLLLLADKVPETSLS 387
Query: 325 VPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
VP++ KYL+FTMILVT SV++++ VLN++ RSP TH M WV ++FI LP L ++RP
Sbjct: 388 VPIIIKYLMFTMILVTFSVILSVVVLNLHHRSPHTHQMPTWVRQIFIHKLPLYLGLKRP 446
Score = 135 (52.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 500 LARLASIHFCD--LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
LA+L S++ D + T + EW DY+L W P EY G+D+L + + +WLPD+VL N
Sbjct: 143 LAQLISLNEKDEEMSTKVYLDLEWTDYRLSWDPAEYEGIDSLRITAGSVWLPDVVLLN 200
>WB|WBGene00000046 [details] [associations]
symbol:acr-7 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOGENOM:HOG000006756
GeneTree:ENSGT00630000089708 KO:K05312 EMBL:AF187012 EMBL:Z36753
PIR:T24724 RefSeq:NP_495647.1 UniGene:Cel.19448
ProteinModelPortal:P45963 SMR:P45963 EnsemblMetazoa:T09A5.3
GeneID:174262 KEGG:cel:CELE_T09A5.3 UCSC:T09A5.3 CTD:174262
WormBase:T09A5.3 eggNOG:NOG281192 InParanoid:P45963 OMA:VINWIPP
NextBio:883279 Uniprot:P45963
Length = 538
Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
Identities = 138/382 (36%), Positives = 220/382 (57%)
Query: 11 AMHVLFP-SLTFL-VFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKL 68
++ ++ P +L FL VF+ +G+ + +LY DLL+NY+ L+RPV N LTV M + +
Sbjct: 5 SIQIVLPVALFFLIVFNGFTVEGSKKEAQLYRDLLTNYSYLVRPVRNPKKALTVTMKVFI 64
Query: 69 SQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPS 128
Q++ V+ K+Q++ N W LK ++ W D++L+W+P +Y + ++
Sbjct: 65 QQVLLVDAKHQMIEVNAW----LK--------YI---WTDFRLRWNPLDYENITSVRFQG 109
Query: 129 E-HIWLPDIVLYN----NADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPF 183
E IW PDI+LYN + ++++T T A+ + DG + W PP I+K C++D+ FPF
Sbjct: 110 EDQIWQPDILLYNRYIEDEQESFDITYKTNAVAYSDGVINWIPPGIFKLSCKMDITLFPF 169
Query: 184 DVQTCVMKFGSWTYDGYTVDLK-HILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNE 242
D Q C MKFGSWTY G+ +DL+ +++G + DL Y + EW ++ PA R E
Sbjct: 170 DEQICFMKFGSWTYHGFALDLRLDVVKGQEPSA-----DLSTYITNGEWHLLSAPARREE 224
Query: 243 KFYSCCEEPYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPS-DSGEKVSLCX 301
KFY CC+EPYP + F + LRR+T +Y N+++P + +SF+S+L F LP+ D EK+ L
Sbjct: 225 KFYKCCKEPYPTVKFYLHLRRRTFYYVFNVVLPTLLVSFMSLLAFCLPATDLSEKIGLQT 284
Query: 302 XXXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHV 361
+E+ P TS VPLLG + +V +S TI VLN+ +R H
Sbjct: 285 TILLSVCFFLTILSEMTPTTSEAVPLLGVFFSALTFIVAMSTTFTILVLNIRYRQITNHY 344
Query: 362 MKPWVHKVFIEVLPKILFIQRP 383
+ P +F+E LP ++ ++RP
Sbjct: 345 LSPMFRSIFLECLPWLMMMKRP 366
>UNIPROTKB|F1M9W0 [details] [associations]
symbol:Chrna7 "Neuronal acetylcholine receptor subunit
alpha-7" species:10116 "Rattus norvegicus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 RGD:2348 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00630000089708 IPI:IPI00607154
ProteinModelPortal:F1M9W0 Ensembl:ENSRNOT00000051883
ArrayExpress:F1M9W0 Uniprot:F1M9W0
Length = 502
Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
Identities = 128/292 (43%), Positives = 180/292 (61%)
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
KNQ++TTN+W+ W D+ L+W+ EY GV + P IW PDI+LYN DG +
Sbjct: 68 KNQVLTTNIWLQMSWTDHYLQWNMSEYPGVKNVRFPDGQIWKPDILLYNRQDGRFNAEFH 127
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
+ ++ G ++ PP I+KS C IDV +FPFDVQ C +KFGSW+Y G+++DL+ +Q
Sbjct: 128 SNVLIKKAGYCLYLPPCIFKSSCYIDVRWFPFDVQQCKLKFGSWSYGGWSLDLQ--MQEA 185
Query: 212 DSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVN 271
D + Y + EWD+M +P RNEKFY CC+EPYPD+ + +T+RR+TL+Y +N
Sbjct: 186 D---------ISSYIPNGEWDLMGIPGKRNEKFYECCKEPYPDVTYTVTMRRRTLYYGLN 236
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
L+IPCV IS L++LVF LP+DSGEK+SL AEI+P TS +VPL+ +Y
Sbjct: 237 LLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQY 296
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
TMI+V LSVVVT+ VL + P M W + + L ++RP
Sbjct: 297 FASTMIIVGLSVVVTVIVLRYHHHDPDGGKMPKWTRIILLNWCAWFLRMKRP 348
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 74/176 (42%), Positives = 107/176 (60%)
Query: 30 QGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQ 89
QG + +RLY +L+ NYN L RPV N+S LTV L L Q+++V+ KNQ++TTN+W+
Sbjct: 22 QGEFQ-RRLYKELVKNYNPLERPVANDSQPLTVYFSLSLLQIMDVDEKNQVLTTNIWLQM 80
Query: 90 NLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVT 149
+ W D+ L+W+ EY GV + P IW PDI+LYN DG +
Sbjct: 81 S---------------WTDHYLQWNMSEYPGVKNVRFPDGQIWKPDILLYNRQDGRFNAE 125
Query: 150 IMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLK 205
+ ++ G ++ PP I+KS C IDV +FPFDVQ C +KFGSW+Y G+++DL+
Sbjct: 126 FHSNVLIKKAGYCLYLPPCIFKSSCYIDVRWFPFDVQQCKLKFGSWSYGGWSLDLQ 181
>UNIPROTKB|F1P4Y5 [details] [associations]
symbol:CHRNA7 "Neuronal acetylcholine receptor subunit
alpha-7" species:9031 "Gallus gallus" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0042391
"regulation of membrane potential" evidence=IEA] [GO:0048149
"behavioral response to ethanol" evidence=IEA] [GO:0050728
"negative regulation of inflammatory response" evidence=IEA]
[GO:0060112 "generation of ovulation cycle rhythm" evidence=IEA]
[GO:0001988 "positive regulation of heart rate involved in
baroreceptor response to decreased systemic arterial blood
pressure" evidence=IEA] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] [GO:0006897
"endocytosis" evidence=IEA] [GO:0007271 "synaptic transmission,
cholinergic" evidence=IEA] [GO:0007613 "memory" evidence=IEA]
[GO:0008306 "associative learning" evidence=IEA] [GO:0009897
"external side of plasma membrane" evidence=IEA] [GO:0014061
"regulation of norepinephrine secretion" evidence=IEA] [GO:0016324
"apical plasma membrane" evidence=IEA] [GO:0030317 "sperm motility"
evidence=IEA] [GO:0032094 "response to food" evidence=IEA]
[GO:0032225 "regulation of synaptic transmission, dopaminergic"
evidence=IEA] [GO:0032691 "negative regulation of interleukin-1
beta production" evidence=IEA] [GO:0032715 "negative regulation of
interleukin-6 production" evidence=IEA] [GO:0032720 "negative
regulation of tumor necrosis factor production" evidence=IEA]
[GO:0035095 "behavioral response to nicotine" evidence=IEA]
[GO:0042110 "T cell activation" evidence=IEA] [GO:0042113 "B cell
activation" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0009897 GO:GO:0045471
GO:GO:0016324 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0050728 GO:GO:0006897 GO:GO:0014061
GO:GO:0042391 GO:GO:0004889 GeneTree:ENSGT00630000089708
GO:GO:0035094 GO:GO:0042113 CTD:1139 KO:K04809 GO:GO:0032720
UniGene:Gga.4000 NextBio:20813529 GO:GO:0032691 GO:GO:0032715
GO:GO:0032225 GO:GO:0032094 GO:GO:0030317 GO:GO:0042110 OMA:KESCQGP
EMBL:AADN02040365 IPI:IPI01017261 RefSeq:NP_989512.2
Ensembl:ENSGALT00000006519 GeneID:374001 KEGG:gga:374001
Uniprot:F1P4Y5
Length = 502
Score = 676 (243.0 bits), Expect = 1.7e-66, P = 1.7e-66
Identities = 130/292 (44%), Positives = 181/292 (61%)
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
KNQ++TTN+W+ W D+ L+W+ EY GV + P IW PDI+LYN+AD ++ T
Sbjct: 68 KNQVLTTNIWLQMYWTDHYLQWNVSEYPGVKNVRFPDGLIWKPDILLYNSADERFDATFH 127
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
T +++ G + PP I+KS C IDV +FPFDVQ C +KFGSWTY G+++DL+ +Q
Sbjct: 128 TNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQKCNLKFGSWTYGGWSLDLQ--MQEA 185
Query: 212 DSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVN 271
D + Y + EWD++ +P R E FY CC+EPYPDI F +T+RR+TL+Y +N
Sbjct: 186 D---------ISGYISNGEWDLVGIPGKRTESFYECCKEPYPDITFTVTMRRRTLYYGLN 236
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
L+IPCV IS L++LVF LP+DSGEK+SL AEI+P TS +VPL+ +Y
Sbjct: 237 LLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQY 296
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
TMI+V LSVVVT+ VL + P M W + + L ++RP
Sbjct: 297 FASTMIIVGLSVVVTVIVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRMKRP 348
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 78/176 (44%), Positives = 108/176 (61%)
Query: 30 QGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQ 89
QG + K LY +LL NYN L RPV N+S LTV L L Q+++V+ KNQ++TTN+W+
Sbjct: 22 QGEFQRK-LYKELLKNYNPLERPVANDSQPLTVYFTLSLMQIMDVDEKNQVLTTNIWLQM 80
Query: 90 NLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVT 149
W D+ L+W+ EY GV + P IW PDI+LYN+AD ++ T
Sbjct: 81 Y---------------WTDHYLQWNVSEYPGVKNVRFPDGLIWKPDILLYNSADERFDAT 125
Query: 150 IMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLK 205
T +++ G + PP I+KS C IDV +FPFDVQ C +KFGSWTY G+++DL+
Sbjct: 126 FHTNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQKCNLKFGSWTYGGWSLDLQ 181
>UNIPROTKB|P22770 [details] [associations]
symbol:CHRNA7 "Neuronal acetylcholine receptor subunit
alpha-7" species:9031 "Gallus gallus" [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0050890 "cognition" evidence=ISS] [GO:0042166 "acetylcholine
binding" evidence=ISS] [GO:0000187 "activation of MAPK activity"
evidence=ISS] [GO:0001540 "beta-amyloid binding" evidence=ISS]
[GO:0001666 "response to hypoxia" evidence=ISS] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0005892 "acetylcholine-gated channel complex" evidence=ISS]
[GO:0006816 "calcium ion transport" evidence=ISS] [GO:0006874
"cellular calcium ion homeostasis" evidence=ISS] [GO:0007165
"signal transduction" evidence=ISS] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISS] [GO:0015464
"acetylcholine receptor activity" evidence=ISS] [GO:0015643 "toxic
substance binding" evidence=ISS] [GO:0032720 "negative regulation
of tumor necrosis factor production" evidence=ISS] [GO:0035094
"response to nicotine" evidence=ISS] [GO:0045766 "positive
regulation of angiogenesis" evidence=ISS] [GO:0017081 "chloride
channel regulator activity" evidence=ISS] [GO:0042803 "protein
homodimerization activity" evidence=ISS] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0042803 GO:GO:0008284
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0050890
GO:GO:0001666 GO:GO:0000187 GO:GO:0045766 GO:GO:0001540
GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889 HOGENOM:HOG000006756
eggNOG:NOG235631 GO:GO:0005892 GO:GO:0015464 GO:GO:0035094
GO:GO:0006816 OrthoDB:EOG483D4K GO:GO:0017081 GO:GO:0015643
GO:GO:0006874 GO:GO:0032720 EMBL:X68586 EMBL:X52295 EMBL:X68246
IPI:IPI00591091 PIR:JN0113 UniGene:Gga.4000 PDB:1KC4 PDB:1KL8
PDB:1OL3 PDB:1OL4 PDB:1OL8 PDB:1OL9 PDBsum:1KC4 PDBsum:1KL8
PDBsum:1OL3 PDBsum:1OL4 PDBsum:1OL8 PDBsum:1OL9
ProteinModelPortal:P22770 SMR:P22770 InParanoid:P22770
EvolutionaryTrace:P22770 NextBio:20813529 Uniprot:P22770
Length = 502
Score = 676 (243.0 bits), Expect = 1.7e-66, P = 1.7e-66
Identities = 130/292 (44%), Positives = 181/292 (61%)
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
KNQ++TTN+W+ W D+ L+W+ EY GV + P IW PDI+LYN+AD ++ T
Sbjct: 68 KNQVLTTNIWLQMYWTDHYLQWNVSEYPGVKNVRFPDGLIWKPDILLYNSADERFDATFH 127
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
T +++ G + PP I+KS C IDV +FPFDVQ C +KFGSWTY G+++DL+ +Q
Sbjct: 128 TNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQKCNLKFGSWTYGGWSLDLQ--MQEA 185
Query: 212 DSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVN 271
D + Y + EWD++ +P R E FY CC+EPYPDI F +T+RR+TL+Y +N
Sbjct: 186 D---------ISGYISNGEWDLVGIPGKRTESFYECCKEPYPDITFTVTMRRRTLYYGLN 236
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
L+IPCV IS L++LVF LP+DSGEK+SL AEI+P TS +VPL+ +Y
Sbjct: 237 LLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQY 296
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
TMI+V LSVVVT+ VL + P M W + + L ++RP
Sbjct: 297 FASTMIIVGLSVVVTVIVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRMKRP 348
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 78/176 (44%), Positives = 108/176 (61%)
Query: 30 QGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQ 89
QG + K LY +LL NYN L RPV N+S LTV L L Q+++V+ KNQ++TTN+W+
Sbjct: 22 QGEFQRK-LYKELLKNYNPLERPVANDSQPLTVYFTLSLMQIMDVDEKNQVLTTNIWLQM 80
Query: 90 NLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVT 149
W D+ L+W+ EY GV + P IW PDI+LYN+AD ++ T
Sbjct: 81 Y---------------WTDHYLQWNVSEYPGVKNVRFPDGLIWKPDILLYNSADERFDAT 125
Query: 150 IMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLK 205
T +++ G + PP I+KS C IDV +FPFDVQ C +KFGSWTY G+++DL+
Sbjct: 126 FHTNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQKCNLKFGSWTYGGWSLDLQ 181
>ZFIN|ZDB-GENE-060503-606 [details] [associations]
symbol:si:ch211-39a7.1 "si:ch211-39a7.1"
species:7955 "Danio rerio" [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236
ZFIN:ZDB-GENE-060503-606 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006756 GeneTree:ENSGT00630000089708 eggNOG:NOG235631
OrthoDB:EOG483D4K EMBL:CR450791 IPI:IPI00496227
RefSeq:NP_001038562.1 UniGene:Dr.104111 Ensembl:ENSDART00000138971
GeneID:566141 KEGG:dre:566141 InParanoid:Q1L8Y9 OMA:EVRYMAD
NextBio:20888052 Uniprot:Q1L8Y9
Length = 589
Score = 676 (243.0 bits), Expect = 1.7e-66, P = 1.7e-66
Identities = 122/292 (41%), Positives = 185/292 (63%)
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
KNQ++TTN+W+N W D+ L+W+ EY GV L ++ +W PDI+LYN+AD ++ T
Sbjct: 67 KNQVLTTNIWLNMHWYDHYLQWNQSEYPGVKNLRFTTDQVWTPDILLYNSADDKFDSTFK 126
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
+ +++ G + PP I+ S C +DV +FPFD+Q C +KFGSWT+DG+ +DL+
Sbjct: 127 SNVVVNSSGYCNYLPPGIFMSTCNVDVRWFPFDIQKCELKFGSWTFDGWLLDLQ------ 180
Query: 212 DSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVN 271
++ DI Y + EWD++ VP RNE FY CC+EPYPD+ F +T+RR+TL+Y +N
Sbjct: 181 -MNEADIS----GYMPNGEWDLVGVPGTRNELFYDCCKEPYPDVTFVVTIRRRTLYYALN 235
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
L+IPCV +S +++L+F LP+DSGEK+SL AEI+P TS ++PL+G+Y
Sbjct: 236 LLIPCVLLSSMTLLIFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSIPLIGQY 295
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
MI+V +SV+ T+ VL + P M WV V ++ + L ++RP
Sbjct: 296 FASIMIIVGMSVIATVVVLQYHHHDPNGGNMPKWVQLVLLQWVAWFLRMKRP 347
Score = 381 (139.2 bits), Expect = 8.1e-34, P = 8.1e-34
Identities = 68/170 (40%), Positives = 108/170 (63%)
Query: 36 KRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQI 95
+ L +LL +YNR+ RPV N+S LTV + + L Q+++V+ KNQ++TTN+W+N +
Sbjct: 26 RTLLKNLLKDYNRMERPVANDSQPLTVFLSMSLIQIMDVDEKNQVLTTNIWLNMH----- 80
Query: 96 MTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAI 155
W D+ L+W+ EY GV L ++ +W PDI+LYN+AD ++ T + +
Sbjct: 81 ----------WYDHYLQWNQSEYPGVKNLRFTTDQVWTPDILLYNSADDKFDSTFKSNVV 130
Query: 156 LHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLK 205
++ G + PP I+ S C +DV +FPFD+Q C +KFGSWT+DG+ +DL+
Sbjct: 131 VNSSGYCNYLPPGIFMSTCNVDVRWFPFDIQKCELKFGSWTFDGWLLDLQ 180
>UNIPROTKB|P54131 [details] [associations]
symbol:CHRNA7 "Neuronal acetylcholine receptor subunit
alpha-7" species:9913 "Bos taurus" [GO:0006816 "calcium ion
transport" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=ISS] [GO:0004889 "acetylcholine-activated cation-selective
channel activity" evidence=ISS] [GO:0001666 "response to hypoxia"
evidence=ISS] [GO:0000187 "activation of MAPK activity"
evidence=ISS] [GO:0001540 "beta-amyloid binding" evidence=ISS]
[GO:0005892 "acetylcholine-gated channel complex" evidence=ISS]
[GO:0015643 "toxic substance binding" evidence=ISS] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0050890 "cognition" evidence=ISS] [GO:0045766
"positive regulation of angiogenesis" evidence=ISS] [GO:0042803
"protein homodimerization activity" evidence=ISS] [GO:0042166
"acetylcholine binding" evidence=ISS] [GO:0035094 "response to
nicotine" evidence=ISS] [GO:0032720 "negative regulation of tumor
necrosis factor production" evidence=ISS] [GO:0017081 "chloride
channel regulator activity" evidence=ISS] [GO:0015464
"acetylcholine receptor activity" evidence=ISS] [GO:0008284
"positive regulation of cell proliferation" evidence=ISS]
[GO:0007165 "signal transduction" evidence=ISS] [GO:0006874
"cellular calcium ion homeostasis" evidence=ISS] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0042803 GO:GO:0008284
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0050890
GO:GO:0001666 GO:GO:0000187 GO:GO:0045766 GO:GO:0001540
GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889 HOGENOM:HOG000006756
eggNOG:NOG235631 GO:GO:0005892 GO:GO:0015464 GO:GO:0035094
GO:GO:0006816 EMBL:X93604 IPI:IPI00688255 IPI:IPI00692708
RefSeq:NP_776940.1 UniGene:Bt.88 ProteinModelPortal:P54131
SMR:P54131 STRING:P54131 GeneID:282178 KEGG:bta:282178 CTD:1139
InParanoid:P54131 KO:K04809 OrthoDB:EOG483D4K BindingDB:P54131
ChEMBL:CHEMBL5934 NextBio:20806007 GO:GO:0017081 GO:GO:0015643
GO:GO:0006874 GO:GO:0032720 Uniprot:P54131
Length = 499
Score = 675 (242.7 bits), Expect = 2.2e-66, P = 2.2e-66
Identities = 130/292 (44%), Positives = 183/292 (62%)
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
KNQ++TTN+W+ W D+ L+W+ EY GV T+ P IW PDI+LYN+AD ++ T
Sbjct: 65 KNQVLTTNIWLQMTWTDHYLQWNASEYPGVKTVRFPDGQIWKPDILLYNSADERFDATFH 124
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
T +++ G + PP I+KS C IDV +FPFDVQ C +KFGSW+Y G+++DL+ +Q
Sbjct: 125 TNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQQCKLKFGSWSYGGWSLDLQ--MQEA 182
Query: 212 DSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVN 271
D + Y + EWD++ V R+EKFY CC+EPYPD+ F +++RR+TL+Y +N
Sbjct: 183 D---------ISGYIPNGEWDLVGVLGKRSEKFYECCKEPYPDVTFTVSIRRRTLYYGLN 233
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
L+IPCV IS L++LVF LP+DSGEK+SL AEI+P TS +VPL+ +Y
Sbjct: 234 LLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQY 293
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
TMI+V LSVVVT+ VL + P M W V + L ++RP
Sbjct: 294 FASTMIIVGLSVVVTVIVLQYHHHDPDGGKMPKWTRVVLLNWCAWFLRMKRP 345
Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
Identities = 80/176 (45%), Positives = 111/176 (63%)
Query: 30 QGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQ 89
QG + K LY DL+ NYN L RPV N+S LTV L L Q+++V+ KNQ++TTN+W+
Sbjct: 19 QGEFQRK-LYKDLVKNYNPLERPVANDSLPLTVYFSLSLLQIMDVDEKNQVLTTNIWLQ- 76
Query: 90 NLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVT 149
MT W D+ L+W+ EY GV T+ P IW PDI+LYN+AD ++ T
Sbjct: 77 ------MT--------WTDHYLQWNASEYPGVKTVRFPDGQIWKPDILLYNSADERFDAT 122
Query: 150 IMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLK 205
T +++ G + PP I+KS C IDV +FPFDVQ C +KFGSW+Y G+++DL+
Sbjct: 123 FHTNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQQCKLKFGSWSYGGWSLDLQ 178
>FB|FBgn0032151 [details] [associations]
symbol:nAcRalpha-30D "nicotinic Acetylcholine Receptor alpha
30D" species:7227 "Drosophila melanogaster" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISS;IDA;NAS] [GO:0005892 "acetylcholine-gated channel
complex" evidence=ISS;IDA;NAS] [GO:0006811 "ion transport"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0017085 "response to insecticide" evidence=IMP;NAS] [GO:0016021
"integral to membrane" evidence=IDA] [GO:0046716 "muscle cell
homeostasis" evidence=IMP] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 EMBL:AE014134 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00630000089708 GO:GO:0005892 OMA:KESCQGP
GO:GO:0046716 GO:GO:0017085 UniGene:Dm.4086 GeneID:34304
KEGG:dme:Dmel_CG4128 CTD:34304 FlyBase:FBgn0032151
ChiTaRS:nAcRalpha-30D GenomeRNAi:34304 NextBio:787836
RefSeq:NP_995675.1 ProteinModelPortal:Q7KTF8 SMR:Q7KTF8
STRING:Q7KTF8 PRIDE:Q7KTF8 EnsemblMetazoa:FBtr0079912
UCSC:CG4128-RE InParanoid:Q7KTF8 PhylomeDB:Q7KTF8
ArrayExpress:Q7KTF8 Bgee:Q7KTF8 Uniprot:Q7KTF8
Length = 523
Score = 674 (242.3 bits), Expect = 2.8e-66, P = 2.8e-66
Identities = 144/330 (43%), Positives = 196/330 (59%)
Query: 15 LFPSLTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEV 74
LF L FL QG E KRL + LLS YN L RPV N S+ L VK GL L Q+I+V
Sbjct: 11 LFVLLIFLAIIKESCQGPHE-KRLLNHLLSTYNTLERPVANESEPLEVKFGLTLQQIIDV 69
Query: 75 NLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLP 134
+ KNQI+TTN W+N EW DY L+W+ EYGGV L + +W P
Sbjct: 70 DEKNQILTTNAWLNL---------------EWNDYNLRWNETEYGGVKDLRITPNKLWKP 114
Query: 135 DIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGS 194
D+++YN+AD ++ T T ++ ++G ++ PP I+KS C+ID+ +FPFD Q C MKFGS
Sbjct: 115 DVLMYNSADEGFDGTYHTNIVVKHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCEMKFGS 174
Query: 195 WTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPD 254
WTYDG +DL +L D G DL D+ + EW ++ +P +N Y+CC EPY D
Sbjct: 175 WTYDGNQLDL--VLNSED------GGDLSDFITNGEWYLLAMPGKKNTIVYACCPEPYVD 226
Query: 255 IIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXX 314
I F I +RR+TL+Y NLI+PCV IS +++L F LP DSGEK++L
Sbjct: 227 ITFTIQIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFLNLV 286
Query: 315 AEIIPPTSLTVPLLGKYLLFTMILVTLSVV 344
AE +P TS VPL+G +L ++ V L++V
Sbjct: 287 AESMPTTSDAVPLIGVTILLSLT-VFLNLV 315
Score = 150 (57.9 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 35/103 (33%), Positives = 52/103 (50%)
Query: 281 FLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLFTMILVT 340
FL+++ +P+ S + AE +P S +PLLG Y M +V
Sbjct: 282 FLNLVAESMPTTSDAVPLIGVTILLSLTVFLNLVAETLPQVSDAIPLLGTYFNCIMFMVA 341
Query: 341 LSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
SVV+T+ VLN + R+ H M PW+ VF++ LP IL + RP
Sbjct: 342 SSVVLTVVVLNYHHRTADIHEMPPWIKSVFLQWLPWILRMGRP 384
Score = 119 (46.9 bits), Expect = 0.00072, P = 0.00072
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 511 LLTPINFLQ-EWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+LT +L EW DY L+W+ EYGGV L + +W PD+++YN
Sbjct: 75 ILTTNAWLNLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYN 120
>RGD|620142 [details] [associations]
symbol:Chrna10 "cholinergic receptor, nicotinic, alpha 10
(neuronal)" species:10116 "Rattus norvegicus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA;ISO] [GO:0005262 "calcium channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006812 "cation transport" evidence=ISO] [GO:0007204 "elevation
of cytosolic calcium ion concentration" evidence=IEA;ISO]
[GO:0007271 "synaptic transmission, cholinergic" evidence=ISO;TAS]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030424 "axon" evidence=IDA]
[GO:0034220 "ion transmembrane transport" evidence=ISO] [GO:0042472
"inner ear morphogenesis" evidence=IEA;ISO] [GO:0043204
"perikaryon" evidence=IDA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0050910 "detection of mechanical stimulus
involved in sensory perception of sound" evidence=IEA;ISO]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 RGD:620142
GO:GO:0016021 GO:GO:0005886 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0043204
GO:GO:0007271 GO:GO:0042472 CTD:57053 HOVERGEN:HBG003756 KO:K04811
GO:GO:0004889 eggNOG:NOG306809 HOGENOM:HOG000006756 OMA:DGAVRWD
OrthoDB:EOG4S7JQ0 GO:GO:0050910 GO:GO:0007204 EMBL:AF196344
IPI:IPI00203474 RefSeq:NP_072161.1 UniGene:Rn.48767
ProteinModelPortal:Q9JLB5 PRIDE:Q9JLB5 Ensembl:ENSRNOT00000027507
GeneID:64574 KEGG:rno:64574 UCSC:RGD:620142
GeneTree:ENSGT00630000089708 InParanoid:Q9JLB5 BindingDB:Q9JLB5
ChEMBL:CHEMBL3461 NextBio:613536 Genevestigator:Q9JLB5
GermOnline:ENSRNOG00000020293 Uniprot:Q9JLB5
Length = 447
Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
Identities = 138/366 (37%), Positives = 205/366 (56%)
Query: 16 FPSLTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVN 75
F L FL + A+G A +L+ DL +NY +RPV + L V + + LSQ+I+++
Sbjct: 12 FLLLLFLPAECLGAEGR-LAHKLFRDLFANYTSALRPVADTDQTLNVTLEVTLSQIIDMD 70
Query: 76 LKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPD 135
+NQ++T +W+ Q EW D L W P+ YG +D + +PS +W PD
Sbjct: 71 ERNQVLTLYLWIRQ---------------EWTDAYLHWDPKAYGDLDAIRIPSRLVWRPD 115
Query: 136 IVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSW 195
IVLYN AD + T ++ +DG V W+ PAI +S C +DV FPFD Q C + FGSW
Sbjct: 116 IVLYNKADTQPPASASTNVVVRHDGAVRWDAPAITRSSCRVDVSAFPFDAQRCGLTFGSW 175
Query: 196 TYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDI 255
T+ G+ +D++ +G + L D+ +VEW ++ +PA R Y CC EPYPD+
Sbjct: 176 THGGHQLDVRP--RGTSAS-------LADFVENVEWRVLGMPARRRVLTYGCCSEPYPDV 226
Query: 256 IFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXA 315
F + LRR+ Y NL++PCV IS L+ L F+LP+DSGEKVSL A
Sbjct: 227 TFTLLLRRRAAAYVCNLLLPCVFISLLAPLAFHLPADSGEKVSLGVTVLLALTVFQLILA 286
Query: 316 EIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLP 375
E +PP +VPL+GKY + TM +VT S +TI ++N+++ P H + W + + L
Sbjct: 287 ESMPPAE-SVPLIGKYYMATMTMVTFSTALTILIMNLHYCGPNAHPVPAWARVLLLGHLA 345
Query: 376 KILFIQ 381
K L ++
Sbjct: 346 KGLCVR 351
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 519 QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
QEW D L W P+ YG +D + +PS +W PDIVLYN
Sbjct: 84 QEWTDAYLHWDPKAYGDLDAIRIPSRLVWRPDIVLYN 120
>UNIPROTKB|I3L9G3 [details] [associations]
symbol:CHRNB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048747 "muscle fiber development" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
[GO:0042166 "acetylcholine binding" evidence=IEA] [GO:0035095
"behavioral response to nicotine" evidence=IEA] [GO:0015464
"acetylcholine receptor activity" evidence=IEA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IEA] [GO:0007271
"synaptic transmission, cholinergic" evidence=IEA] [GO:0006936
"muscle contraction" evidence=IEA] [GO:0005892 "acetylcholine-gated
channel complex" evidence=IEA] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] [GO:0001941
"postsynaptic membrane organization" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0035095 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007274 GO:GO:0007271
GO:GO:0042391 GO:GO:0042166 GO:GO:0004889 GO:GO:0005892
GO:GO:0015464 GeneTree:ENSGT00620000087691 KO:K04812 OMA:FIDGPNR
GO:GO:0006936 GO:GO:0048747 GO:GO:0001941 EMBL:FP565284
RefSeq:XP_003483146.1 Ensembl:ENSSSCT00000029953 GeneID:100739757
KEGG:ssc:100739757 Uniprot:I3L9G3
Length = 505
Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
Identities = 140/359 (38%), Positives = 213/359 (59%)
Query: 29 AQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVN 88
A G++ RL + L S Y+ +RP D++ V +GL L+QLI +N K++ M+T V+++
Sbjct: 22 ALGSEVEGRLREKLFSGYDSSVRPAREVGDRVGVSIGLSLAQLISLNEKDEEMSTKVYLD 81
Query: 89 QNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEV 148
EW DY+L W P E+ G+D+L + + +WLPD+VL NN DGN++V
Sbjct: 82 L---------------EWTDYRLSWDPAEHEGIDSLRITAGSVWLPDVVLLNNNDGNFDV 126
Query: 149 TIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHIL 208
+ ++ DG V W PP IY+S C I V YFPFD Q C M F S++YD V L+ L
Sbjct: 127 ALDINVVVSSDGSVRWRPPGIYRSSCSIQVTYFPFDWQNCTMVFSSYSYDSSEVSLQTGL 186
Query: 209 QGPDS-DKIDIGIDLQDYYLSVEWDIMKVPA--VRNEKF-YSCCEEPYPDIIFNITLRRK 264
GPD ++ ++ I + + +W+I+ P+ ++ E ++ F + +RRK
Sbjct: 187 -GPDGQERQEVHIHEGTFIENGQWEIIHKPSRLIQPPADPRGGGEGRREEVTFYLIIRRK 245
Query: 265 TLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLT 324
LFY VN+I PC+ I+ L++ VFYLP D+GEK+ L A+ +P TSL+
Sbjct: 246 PLFYLVNVIAPCILITILAIFVFYLPPDAGEKMGLSIFALLTLTVFLLLLADKVPETSLS 305
Query: 325 VPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
VP++ KYL+FTM+LVT SV++++ VLN++ RSP TH M WV ++FI LP L ++RP
Sbjct: 306 VPIIIKYLMFTMVLVTFSVILSVVVLNLHHRSPHTHQMPLWVRQIFILKLPLYLGLKRP 364
Score = 131 (51.2 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 491 RLPYELPSKLARLASIHFCD--LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWL 548
R+ + LA+L S++ D + T + EW DY+L W P E+ G+D+L + + +WL
Sbjct: 52 RVGVSIGLSLAQLISLNEKDEEMSTKVYLDLEWTDYRLSWDPAEHEGIDSLRITAGSVWL 111
Query: 549 PDIVLYN 555
PD+VL N
Sbjct: 112 PDVVLLN 118
>UNIPROTKB|Q07001 [details] [associations]
symbol:CHRND "Acetylcholine receptor subunit delta"
species:9606 "Homo sapiens" [GO:0030054 "cell junction"
evidence=IEA] [GO:0004889 "acetylcholine-activated cation-selective
channel activity" evidence=IEA] [GO:0005892 "acetylcholine-gated
channel complex" evidence=IEA] [GO:0042166 "acetylcholine binding"
evidence=IEA] [GO:0042391 "regulation of membrane potential"
evidence=IEA] [GO:0006810 "transport" evidence=TAS] [GO:0006936
"muscle contraction" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0045211 "postsynaptic membrane" evidence=NAS] [GO:0048630
"skeletal muscle tissue growth" evidence=IMP] [GO:0050881
"musculoskeletal movement" evidence=IMP] [GO:0050905 "neuromuscular
process" evidence=NAS] Reactome:REACT_13685 InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0007165 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0042391
GO:GO:0042166 HOVERGEN:HBG003756 GO:GO:0004889 GO:GO:0005892
GO:GO:0050905 GO:GO:0048630 MIM:253290 MIM:601462 MIM:608930
Orphanet:33108 Orphanet:98913 HOGENOM:HOG000006757 GO:GO:0006936
CTD:1144 KO:K04816 OMA:FIVNHMR GO:GO:0050881 eggNOG:NOG294470
EMBL:X55019 EMBL:AC092165 EMBL:BC093923 EMBL:BC093925
IPI:IPI00014192 PIR:A60916 RefSeq:NP_000742.1 RefSeq:NP_001243586.1
UniGene:Hs.156289 ProteinModelPortal:Q07001 SMR:Q07001
STRING:Q07001 PhosphoSite:Q07001 DMDM:543759 PaxDb:Q07001
PRIDE:Q07001 Ensembl:ENST00000258385 GeneID:1144 KEGG:hsa:1144
UCSC:uc002vsw.3 GeneCards:GC02P233390 HGNC:HGNC:1965 MIM:100720
neXtProt:NX_Q07001 PharmGKB:PA26497 InParanoid:Q07001
PhylomeDB:Q07001 BindingDB:Q07001 ChEMBL:CHEMBL3011 GenomeRNAi:1144
NextBio:4760 ArrayExpress:Q07001 Bgee:Q07001 CleanEx:HS_CHRND
Genevestigator:Q07001 GermOnline:ENSG00000135902 Uniprot:Q07001
Length = 517
Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
Identities = 146/377 (38%), Positives = 222/377 (58%)
Query: 17 PSLTFLVFSVIIAQGN---DEAKRLYDDLLSN--YNRLIRPVGNNSDKLTVKMGLKLSQL 71
P LT + + + G+ +E +RL L YN+ +RPV + + + V + L LS L
Sbjct: 4 PVLTLGLLAALAVCGSWGLNEEERLIRHLFQEKGYNKELRPVAHKEESVDVALALTLSNL 63
Query: 72 IEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHI 131
I +LK V + L TTNVW+ W D +LKW+ EE+G + L +P + +
Sbjct: 64 I--SLKE--------VEETL-----TTNVWIEHGWTDNRLKWNAEEFGNISVLRLPPDMV 108
Query: 132 WLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMK 191
WLP+IVL NN DG+++++ ++++ G V W PPAI++S C I V YFPFD Q C +K
Sbjct: 109 WLPEIVLENNNDGSFQISYSCNVLVYHYGFVYWLPPAIFRSSCPISVTYFPFDWQNCSLK 168
Query: 192 FGSWTYDG--YTVDLKHILQGPDSDKID-IGIDLQDYYLSVEWDIMKVPAVRNEKFYSCC 248
F S Y T+ LK + + ++ I ID + + + EW+I+ PA N +
Sbjct: 169 FSSLKYTAKEITLSLKQDAKENRTYPVEWIIIDPEGFTENGEWEIVHRPARVNVDPRAPL 228
Query: 249 EEPY-PDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXX 307
+ P DI F + +RRK LFY +N+++PCV ISF+ LVFYLP+DSGEK S+
Sbjct: 229 DSPSRQDITFYLIIRRKPLFYIINILVPCVLISFMVNLVFYLPADSGEKTSVAISVLLAQ 288
Query: 308 XXXXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVH 367
++ +P TS+ +PL+GK+LLF M+LVT+ VV+ + VLN++FR+P THV+ V
Sbjct: 289 SVFLLLISKRLPATSMAIPLIGKFLLFGMVLVTMVVVICVIVLNIHFRTPSTHVLSEGVK 348
Query: 368 KVFIEVLPKILFIQRPA 384
K+F+E LP++L + RPA
Sbjct: 349 KLFLETLPELLHMSRPA 365
>UNIPROTKB|F1SUZ0 [details] [associations]
symbol:CHRNA10 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050910 "detection of mechanical stimulus involved in
sensory perception of sound" evidence=IEA] [GO:0042472 "inner ear
morphogenesis" evidence=IEA] [GO:0007271 "synaptic transmission,
cholinergic" evidence=IEA] [GO:0007204 "elevation of cytosolic
calcium ion concentration" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007271 GO:GO:0042472 GO:GO:0004889
OMA:DGAVRWD GO:GO:0050910 GO:GO:0007204
GeneTree:ENSGT00630000089708 EMBL:CU928773
Ensembl:ENSSSCT00000016147 Uniprot:F1SUZ0
Length = 454
Score = 664 (238.8 bits), Expect = 3.2e-65, P = 3.2e-65
Identities = 131/347 (37%), Positives = 197/347 (56%)
Query: 35 AKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQ 94
A +L+ DL +NY +RPV + L V + + LSQ+I+++ ++Q++T +W+ Q
Sbjct: 34 AHKLFRDLFANYTSALRPVADTDQALNVTLEVTLSQIIDMDERDQVLTLYLWIRQ----- 88
Query: 95 IMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKA 154
EW D L+W P+ YGG+D + +PS +W PDIVLYN D + T
Sbjct: 89 ----------EWTDAYLRWDPDAYGGLDAIRIPSSLVWRPDIVLYNKVDAQAAASASTNV 138
Query: 155 ILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSD 214
+L +DG V W+ PAI +S C +DV FPFD Q C + FGSWT+ G+ +D++ +G +
Sbjct: 139 VLRHDGAVRWDAPAITRSSCRVDVSAFPFDAQRCGLTFGSWTHGGHQLDVRP--RGAAAS 196
Query: 215 KIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLII 274
L D+ +VEW ++ +PA R Y CC EPYPD+ F + LRR+ Y NL++
Sbjct: 197 -------LADFVENVEWRVLGMPARRRVLTYGCCSEPYPDVTFTLLLRRRAAAYVCNLLL 249
Query: 275 PCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLF 334
PCV IS L+ L F+LP+DSGEKVSL AE +PP +VPL+GKY +
Sbjct: 250 PCVLISLLAPLAFHLPADSGEKVSLGVTVLLALTVFQLLLAESMPPAE-SVPLIGKYYMA 308
Query: 335 TMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQ 381
TM LVT S +TI ++N+++ P + W + + L + L ++
Sbjct: 309 TMTLVTFSTALTILIMNLHYCGPSARPVPAWARALLLGHLARGLCVR 355
Score = 136 (52.9 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 519 QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
QEW D L+W P+ YGG+D + +PS +W PDIVLYN
Sbjct: 88 QEWTDAYLRWDPDAYGGLDAIRIPSSLVWRPDIVLYN 124
>UNIPROTKB|Q9GZZ6 [details] [associations]
symbol:CHRNA10 "Neuronal acetylcholine receptor subunit
alpha-10" species:9606 "Homo sapiens" [GO:0005262 "calcium channel
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0042472 "inner
ear morphogenesis" evidence=IEA] [GO:0043204 "perikaryon"
evidence=IEA] [GO:0050910 "detection of mechanical stimulus
involved in sensory perception of sound" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0007271 "synaptic transmission, cholinergic"
evidence=TAS] [GO:0005102 "receptor binding" evidence=TAS]
[GO:0042127 "regulation of cell proliferation" evidence=TAS]
[GO:0016020 "membrane" evidence=TAS] [GO:0007204 "elevation of
cytosolic calcium ion concentration" evidence=IGI]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0016020 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 DrugBank:DB01161
DrugBank:DB00721 GO:GO:0005102 GO:GO:0007271 GO:GO:0042127
GO:GO:0042472 CTD:57053 HOVERGEN:HBG003756 KO:K04811 GO:GO:0004889
EMBL:AJ278118 EMBL:AF199235 EMBL:AF327367 EMBL:AJ295237
IPI:IPI00026461 RefSeq:NP_065135.2 UniGene:Hs.732806
ProteinModelPortal:Q9GZZ6 SMR:Q9GZZ6 STRING:Q9GZZ6 DMDM:14916526
PRIDE:Q9GZZ6 DNASU:57053 Ensembl:ENST00000250699 GeneID:57053
KEGG:hsa:57053 UCSC:uc001lyf.3 GeneCards:GC11M003687
HGNC:HGNC:13800 MIM:606372 neXtProt:NX_Q9GZZ6 PharmGKB:PA26488
eggNOG:NOG306809 HOGENOM:HOG000006756 InParanoid:Q9GZZ6 OMA:DGAVRWD
OrthoDB:EOG4S7JQ0 PhylomeDB:Q9GZZ6 BindingDB:Q9GZZ6
ChEMBL:CHEMBL2551 DrugBank:DB00333 DrugBank:DB00184
DrugBank:DB01090 DrugBank:DB01116 GenomeRNAi:57053 NextBio:62824
ArrayExpress:Q9GZZ6 Bgee:Q9GZZ6 CleanEx:HS_CHRNA10
Genevestigator:Q9GZZ6 GermOnline:ENSG00000129749 GO:GO:0050910
GO:GO:0007204 Uniprot:Q9GZZ6
Length = 450
Score = 664 (238.8 bits), Expect = 3.2e-65, P = 3.2e-65
Identities = 135/363 (37%), Positives = 203/363 (55%)
Query: 19 LTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKN 78
L FL+ + + A +L+ DL +NY +RPV + L V + + LSQ+I+++ +N
Sbjct: 14 LLFLLPAECLGAEGRLALKLFRDLFANYTSALRPVADTDQTLNVTLEVTLSQIIDMDERN 73
Query: 79 QIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVL 138
Q++T +W+ Q EW D L+W P YGG+D + +PS +W PDIVL
Sbjct: 74 QVLTLYLWIRQ---------------EWTDAYLRWDPNAYGGLDAIRIPSSLVWRPDIVL 118
Query: 139 YNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYD 198
YN AD + T +L +DG V W+ PAI +S C +DV FPFD Q C + FGSWT+
Sbjct: 119 YNKADAQPPGSASTNVVLRHDGAVRWDAPAITRSSCRVDVAAFPFDAQHCGLTFGSWTHG 178
Query: 199 GYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFN 258
G+ +D++ +G + L D+ +VEW ++ +PA R Y CC EPYPD+ F
Sbjct: 179 GHQLDVRP--RGAAAS-------LADFVENVEWRVLGMPARRRVLTYGCCSEPYPDVTFT 229
Query: 259 ITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEII 318
+ LRR+ Y NL++PCV IS L+ L F+LP+DSGEKVSL AE +
Sbjct: 230 LLLRRRAAAYVCNLLLPCVLISLLAPLAFHLPADSGEKVSLGVTVLLALTVFQLLLAESM 289
Query: 319 PPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKIL 378
PP +VPL+GKY + TM +VT S +TI ++N+++ P + W + + L + L
Sbjct: 290 PPAE-SVPLIGKYYMATMTMVTFSTALTILIMNLHYCGPSVRPVPAWARALLLGHLARGL 348
Query: 379 FIQ 381
++
Sbjct: 349 CVR 351
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 21/37 (56%), Positives = 26/37 (70%)
Query: 519 QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
QEW D L+W P YGG+D + +PS +W PDIVLYN
Sbjct: 84 QEWTDAYLRWDPNAYGGLDAIRIPSSLVWRPDIVLYN 120
>UNIPROTKB|I3L584 [details] [associations]
symbol:I3L584 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070050 "neuron homeostasis" evidence=IEA] [GO:0050905
"neuromuscular process" evidence=IEA] [GO:0048630 "skeletal muscle
tissue growth" evidence=IEA] [GO:0046716 "muscle cell homeostasis"
evidence=IEA] [GO:0042166 "acetylcholine binding" evidence=IEA]
[GO:0031594 "neuromuscular junction" evidence=IEA] [GO:0019228
"regulation of action potential in neuron" evidence=IEA]
[GO:0015464 "acetylcholine receptor activity" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007274 "neuromuscular
synaptic transmission" evidence=IEA] [GO:0005892
"acetylcholine-gated channel complex" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0003009 "skeletal muscle contraction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0004889
GeneTree:ENSGT00630000089708 OMA:YSCCPDT EMBL:CU469346
Ensembl:ENSSSCT00000028883 Uniprot:I3L584
Length = 480
Score = 663 (238.4 bits), Expect = 4.1e-65, P = 4.1e-65
Identities = 147/380 (38%), Positives = 225/380 (59%)
Query: 18 SLTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLK 77
S++F V + ++ G++ RL L +YN ++RPV ++ + V +GL+L QLI V+
Sbjct: 7 SVSFAVSAGLVL-GSEHETRLVAKLFEDYNSVVRPVEDHRQAVEVTVGLQLIQLINVDEV 65
Query: 78 NQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLK-WSPEEY---GGVDTLHVP-SEHIW 132
NQI+TTNV + Q ++ ++++ + ++ W G ++P E +
Sbjct: 66 NQIVTTNVRLKQVIQISMVSSKCAALGVGYFHNIEVWLIGNIVLVSGFLAGYIPVCESVS 125
Query: 133 L---PDIVLYN-NADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTC 188
L IVL+ +ADG++ + TK +L Y G + W PPAI+KS+CEI V +FPFD Q C
Sbjct: 126 LLHRGSIVLFFCSADGDFAIVKFTKVLLDYTGHITWTPPAIFKSYCEIIVTHFPFDEQNC 185
Query: 189 VMKFGSWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCC 248
MK G+WTYDG V + P+SD+ D L ++ S EW I + ++ Y+CC
Sbjct: 186 SMKLGTWTYDGSVVAIN-----PESDQPD----LSNFMESGEWVIKEARGWKHRVLYACC 236
Query: 249 EE-PYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXX 307
PY DI ++ ++R L++ VN+IIPC+ SFL+ LVFYLP+DSGEK++L
Sbjct: 237 PSTPYLDITYHFVMQRLPLYFIVNVIIPCLLFSFLTGLVFYLPTDSGEKMTLSISVLLSL 296
Query: 308 XXXXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVH 367
E+IP TS VPL+GKY+LFTM+ V S+++T+ V+N + RSP THVM WV
Sbjct: 297 TVFLLVIVELIPSTSSAVPLIGKYMLFTMVFVIASIIITVIVINTHHRSPSTHVMPEWVR 356
Query: 368 KVFIEVLPKILF---IQRPA 384
KVFI+ +P I+F ++RP+
Sbjct: 357 KVFIDTIPNIMFFSTMKRPS 376
>ZFIN|ZDB-GENE-090312-63 [details] [associations]
symbol:chrna9 "cholinergic receptor, nicotinic,
alpha 9" species:7955 "Danio rerio" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 ZFIN:ZDB-GENE-090312-63 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00630000089708 EMBL:CR759875 IPI:IPI00998653
ProteinModelPortal:E9QBV8 Ensembl:ENSDART00000140706 Uniprot:E9QBV8
Length = 548
Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
Identities = 129/308 (41%), Positives = 187/308 (60%)
Query: 74 VNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWL 133
+N+ QI + + + + +NQ++TT +WV Q W D L W EEY G++ + +PS +W
Sbjct: 18 LNVTLQITLSQI-KDMDERNQVLTTYLWVRQIWHDAYLSWDKEEYDGLEVIRIPSNLVWR 76
Query: 134 PDIVLYNNADG-NYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKF 192
PDIVLYNNAD + T +L Y+G++ W+ PAI KS C++DV YFPFD Q C + F
Sbjct: 77 PDIVLYNNADEEDSSGPPDTNVVLRYNGEITWDSPAITKSSCKVDVSYFPFDSQECNLTF 136
Query: 193 GSWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPY 252
GSWTY+G VD I G +S DL D+ +VEW+ +PAV+N Y CC +PY
Sbjct: 137 GSWTYNGNQVD---IAMGMESG------DLSDFVDNVEWECHGMPAVKNVIMYGCCSDPY 187
Query: 253 PDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXX 312
PDI + + L+R++ FY NL++PC ISFL+ L FYLP+DSGEKVSL
Sbjct: 188 PDITYTVLLKRRSSFYIFNLLLPCFLISFLAPLGFYLPADSGEKVSLGVTVLLALTVFQL 247
Query: 313 XXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIE 372
AE +PP+ +VPL+GKY + TM ++T S +TI ++N++F + W + I+
Sbjct: 248 MVAESMPPSE-SVPLIGKYYIATMTMITASTSLTIFIMNIHFCGAEAKPVPHWAKVLIID 306
Query: 373 VLPKILFI 380
+ KI F+
Sbjct: 307 YMSKIFFV 314
Score = 349 (127.9 bits), Expect = 9.4e-30, P = 9.4e-30
Identities = 70/177 (39%), Positives = 103/177 (58%)
Query: 43 LSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWV 102
+ Y+ +RPV + L V + + LSQ+ +++ +NQ++TT +WV Q
Sbjct: 1 MEGYSNALRPVEDTDKALNVTLQITLSQIKDMDERNQVLTTYLWVRQI------------ 48
Query: 103 NQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADG-NYEVTIMTKAILHYDGK 161
W D L W EEY G++ + +PS +W PDIVLYNNAD + T +L Y+G+
Sbjct: 49 ---WHDAYLSWDKEEYDGLEVIRIPSNLVWRPDIVLYNNADEEDSSGPPDTNVVLRYNGE 105
Query: 162 VVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPD-SDKID 217
+ W+ PAI KS C++DV YFPFD Q C + FGSWTY+G VD+ ++ D SD +D
Sbjct: 106 ITWDSPAITKSSCKVDVSYFPFDSQECNLTFGSWTYNGNQVDIAMGMESGDLSDFVD 162
>UNIPROTKB|P04759 [details] [associations]
symbol:CHRND "Acetylcholine receptor subunit delta"
species:9913 "Bos taurus" [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0050881 "musculoskeletal movement" evidence=IEA]
[GO:0048630 "skeletal muscle tissue growth" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
[GO:0042166 "acetylcholine binding" evidence=IEA] [GO:0005892
"acetylcholine-gated channel complex" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0042391 GO:GO:0042166
HOVERGEN:HBG003756 GO:GO:0004889 GO:GO:0005892 GO:GO:0048630
HOGENOM:HOG000006757 GeneTree:ENSGT00620000087691 EMBL:X02473
IPI:IPI00704742 PIR:A24613 RefSeq:NP_776696.1 UniGene:Bt.89
ProteinModelPortal:P04759 SMR:P04759 STRING:P04759 PRIDE:P04759
Ensembl:ENSBTAT00000015135 GeneID:281687 KEGG:bta:281687 CTD:1144
eggNOG:NOG291810 KO:K04816 OMA:FIVNHMR NextBio:20805614
ArrayExpress:P04759 GO:GO:0050881 Uniprot:P04759
Length = 516
Score = 661 (237.7 bits), Expect = 6.7e-65, P = 6.7e-65
Identities = 142/375 (37%), Positives = 221/375 (58%)
Query: 19 LTFLVFSVIIAQGN---DEAKRLYDDLLSN--YNRLIRPVGNNSDKLTVKMGLKLSQLIE 73
LT ++ + ++ G+ +E +RL L YN+ +RP + + + + + L LS LI
Sbjct: 6 LTLVLLAALVVCGSWGLNEEERLIRHLFEEKAYNKELRPAAHK-ESVEISLALTLSNLI- 63
Query: 74 VNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWL 133
+LK V + L TTNVW+ Q W D +L+W E++G + L +P++ +WL
Sbjct: 64 -SLKE--------VEETL-----TTNVWIEQGWTDSRLQWDAEDFGNISVLRLPADMVWL 109
Query: 134 PDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFG 193
P+IVL NN DG+++++ +++ G V W PPAI++S C I V YFPFD Q C +KF
Sbjct: 110 PEIVLENNNDGSFQISYSCNVLIYPSGSVYWLPPAIFRSSCPISVTYFPFDWQNCSLKFS 169
Query: 194 S--WTYDGYTVDLKHILQGPDSDKID-IGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEE 250
S +T T+ LK + S ++ I ID + + + EW+I+ PA N +
Sbjct: 170 SLKYTTKEITLSLKQAEEDGRSYPVEWIIIDPEGFTENGEWEIVHRPARVNVDPSVPLDS 229
Query: 251 PY-PDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXX 309
P D+ F + +RRK LFY +N+++PCV ISF+ LVFYLP+D GEK S+
Sbjct: 230 PNRQDVTFYLIIRRKPLFYVINILVPCVLISFMINLVFYLPADCGEKTSMAISVLLAQSV 289
Query: 310 XXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKV 369
++ +P TS+ +PL+GK+LLF M+LVT+ VV+ + VLN++FR+P THV+ V K+
Sbjct: 290 FLLLISKRLPATSMAIPLIGKFLLFGMVLVTMVVVICVIVLNIHFRTPSTHVLSEPVKKL 349
Query: 370 FIEVLPKILFIQRPA 384
F+E LP+IL + RPA
Sbjct: 350 FLETLPEILHMSRPA 364
>UNIPROTKB|F1Q1V1 [details] [associations]
symbol:CHRND "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00620000087691 CTD:1144 KO:K04816 OMA:FIVNHMR
EMBL:AAEX03014447 RefSeq:XP_543288.2 Ensembl:ENSCAFT00000017944
GeneID:486162 KEGG:cfa:486162 Uniprot:F1Q1V1
Length = 517
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 142/377 (37%), Positives = 221/377 (58%)
Query: 17 PSLTFLVFSVIIAQGN---DEAKRLYDDLLSN--YNRLIRPVGNNSDKLTVKMGLKLSQL 71
P LT + ++++ G+ +E +RL L YN+ +RPV + + + V + L LS L
Sbjct: 4 PVLTLGLLAILVVCGSWGLNEEERLIRYLFEEKGYNKELRPVAHKEESVEVSLALTLSNL 63
Query: 72 IEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHI 131
I +LK V + L TTNVW+ W D +L+W+ +++G + L +P + +
Sbjct: 64 I--SLKE--------VEETL-----TTNVWIEHGWTDSRLQWNAKDFGNISVLRLPPDML 108
Query: 132 WLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMK 191
WLP+IVL NN DG+++++ +++ G V W PPAI+ S C I V YFPFD Q C +K
Sbjct: 109 WLPEIVLENNNDGSFQISYSCNVLIYPSGYVYWLPPAIFCSSCPISVTYFPFDWQNCSLK 168
Query: 192 FGSWTYDG--YTVDLKHILQGPDSDKID-IGIDLQDYYLSVEWDIMKVPAVRNEKFYSCC 248
F S Y T+ LK + ++ I ID + + + EW+I+ PA N
Sbjct: 169 FSSLKYTAKEITLSLKQEEEEGRFYPVEWIIIDPEGFTENGEWEIVHRPARINVDPSIPL 228
Query: 249 EEP-YPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXX 307
+ P + D+ F + +RRK LFY +N+++PCV ISF+ LVFYLP+DSGEK S+
Sbjct: 229 DSPGHQDVTFYLIIRRKPLFYVINILVPCVLISFMINLVFYLPADSGEKTSMAISVLLAQ 288
Query: 308 XXXXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVH 367
++ +P TS+ +PL+GK+LLF M+LVT+ VV+ + VLN++FR+P THV+ V
Sbjct: 289 SVFLLLISKRLPATSMAIPLIGKFLLFGMVLVTMVVVICVIVLNIHFRTPSTHVLSEGVK 348
Query: 368 KVFIEVLPKILFIQRPA 384
K+F+E LP++L + RPA
Sbjct: 349 KLFLETLPELLHMSRPA 365
>UNIPROTKB|P02713 [details] [associations]
symbol:CHRNG "Acetylcholine receptor subunit gamma"
species:9031 "Gallus gallus" [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006757 eggNOG:NOG291810 CTD:1146 KO:K04818
EMBL:K02904 EMBL:S47175 IPI:IPI00577154 PIR:A03172
RefSeq:NP_001026739.1 UniGene:Gga.32083 ProteinModelPortal:P02713
SMR:P02713 PRIDE:P02713 GeneID:429151 KEGG:gga:429151
InParanoid:P02713 OrthoDB:EOG4R7V9N NextBio:20829964 Uniprot:P02713
Length = 514
Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
Identities = 139/356 (39%), Positives = 211/356 (59%)
Query: 32 NDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNL 91
N E K L DL++NYNR +RP L+ Q+I+V LK + TN+ ++ N
Sbjct: 24 NQEEK-LLQDLMTNYNRHLRPA------------LRGDQVIDVTLK--LTLTNL-ISLNE 67
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
+ + +TTNVW+ +W DY+L+W P++Y + L VPS +WLPDIVL NN DG +E+T+
Sbjct: 68 REETLTTNVWIEMQWSDYRLRWDPDKYDDIQQLRVPSAMVWLPDIVLENNIDGTFEITLY 127
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
T +++ DG + W PPAIY+S C I V YFPFD Q C M F S TY ++L +L
Sbjct: 128 TNVLVYPDGSIYWLPPAIYRSSCSIHVTYFPFDWQNCTMVFQSQTYSANEINL--LLTVE 185
Query: 212 DSDKID-IGIDLQDYYLSVEWDIMKVPA--VRNEKFYSCCEEPYPDIIFNITLRRKTLFY 268
+ I+ I ID + + + EW I PA + N ++ + Y +IF + ++RK LFY
Sbjct: 186 EGQTIEWIFIDPEAFTENGEWAIKHRPARKIINSGRFTPDDIQYQQVIFYLIIQRKPLFY 245
Query: 269 TVNLIIPCVGISFLSVLVFYLPSDSG-EKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPL 327
+N+I+PCV IS ++VLV++LP+ +G +K ++ A+ +P TS VPL
Sbjct: 246 IINIIVPCVLISSMAVLVYFLPAKAGGQKCTVSINVLLAQTVFLFLIAQKVPETSQAVPL 305
Query: 328 LGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
+GKYL F M++ + VV + VLNV+ R+P TH M V +V++ +LP+ L + P
Sbjct: 306 IGKYLTFLMVVTVVIVVNAVIVLNVSLRTPNTHSMSQRVRQVWLHLLPRYLGMHMP 361
Score = 127 (49.8 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 511 LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
L T + +W DY+L+W P++Y + L VPS +WLPDIVL N
Sbjct: 72 LTTNVWIEMQWSDYRLRWDPDKYDDIQQLRVPSAMVWLPDIVLEN 116
>UNIPROTKB|E2QZ91 [details] [associations]
symbol:CHRNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
Ensembl:ENSCAFT00000025890 Uniprot:E2QZ91
Length = 508
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 140/363 (38%), Positives = 209/363 (57%)
Query: 29 AQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVN 88
A+G + RL + L Y+ +RP D + V +GL L+QLI +N K++ M+T V+++
Sbjct: 21 ARGTEVEGRLREKLFLGYDSSVRPAREVGDSVGVSVGLSLAQLISLNEKDEEMSTKVYLD 80
Query: 89 QNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEV 148
EW DY+L W P EY G+D+L + + +WLPD+VL NN DGN++V
Sbjct: 81 L---------------EWTDYRLSWDPAEYEGIDSLRITAGSVWLPDVVLLNNNDGNFDV 125
Query: 149 TIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHIL 208
+ ++ DG V W PP +Y+S C I V YFPFD Q C M F S++YD V L H
Sbjct: 126 ALDLNVVVSSDGSVRWQPPGLYRSSCSIQVTYFPFDWQNCTMVFSSYSYDSSEVSL-HTG 184
Query: 209 QGPDSDKI-DIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCC---EEPYPDIIFNITLRRK 264
GPD ++ ++ I + + +W+I+ P+ + E ++ F + +RRK
Sbjct: 185 LGPDRQELQEVHIHEGTFIENGQWEIIHKPSRLVQPPVDPRRGGEGQRQEVTFYLIIRRK 244
Query: 265 TLFYTVNLIIPCVGISFLSVLVFYLPSDS---GEKVSLCXXXXXXXXXXXXXXAEIIPPT 321
LFY VN+I PC+ I+ L++ VFYLP D+ GEK+ L A+ +P T
Sbjct: 245 PLFYLVNVIAPCILITLLAIFVFYLPPDAALQGEKMGLSIFALLTLTVFLLLLADKVPET 304
Query: 322 SLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHK-VFIEVLPKILFI 380
SL+VP++ KYL+FTMILVT SV++++ VLN++ RSP TH M WV + +FI LP L +
Sbjct: 305 SLSVPIIIKYLMFTMILVTFSVILSVVVLNLHHRSPHTHQMPTWVRQQIFIHKLPLYLGL 364
Query: 381 QRP 383
+RP
Sbjct: 365 KRP 367
Score = 135 (52.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 500 LARLASIHFCD--LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
LA+L S++ D + T + EW DY+L W P EY G+D+L + + +WLPD+VL N
Sbjct: 60 LAQLISLNEKDEEMSTKVYLDLEWTDYRLSWDPAEYEGIDSLRITAGSVWLPDVVLLN 117
>UNIPROTKB|B4DT92 [details] [associations]
symbol:CHRND "cDNA FLJ53914, highly similar to
Acetylcholine receptor protein subunit delta" species:9606 "Homo
sapiens" [GO:0004889 "acetylcholine-activated cation-selective
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 HOVERGEN:HBG003756 GO:GO:0004889 CTD:1144 KO:K04816
EMBL:AC092165 RefSeq:NP_000742.1 RefSeq:NP_001243586.1
UniGene:Hs.156289 GeneID:1144 KEGG:hsa:1144 HGNC:HGNC:1965
GenomeRNAi:1144 EMBL:AK300109 IPI:IPI00915865 SMR:B4DT92
STRING:B4DT92 Ensembl:ENST00000543200 UCSC:uc010zmg.2
Uniprot:B4DT92
Length = 502
Score = 608 (219.1 bits), Expect = 2.3e-64, Sum P(2) = 2.3e-64
Identities = 119/293 (40%), Positives = 184/293 (62%)
Query: 96 MTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAI 155
+T + ++ W D +LKW+ EE+G + L +P + +WLP+IVL NN DG+++++ +
Sbjct: 58 LTLSNLISLGWTDNRLKWNAEEFGNISVLRLPPDMVWLPEIVLENNNDGSFQISYSCNVL 117
Query: 156 LHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDG--YTVDLKHILQGPDS 213
+++ G V W PPAI++S C I V YFPFD Q C +KF S Y T+ LK + +
Sbjct: 118 VYHYGFVYWLPPAIFRSSCPISVTYFPFDWQNCSLKFSSLKYTAKEITLSLKQDAKENRT 177
Query: 214 DKID-IGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPY-PDIIFNITLRRKTLFYTVN 271
++ I ID + + + EW+I+ PA N + + P DI F + +RRK LFY +N
Sbjct: 178 YPVEWIIIDPEGFTENGEWEIVHRPARVNVDPRAPLDSPSRQDITFYLIIRRKPLFYIIN 237
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
+++PCV ISF+ LVFYLP+DSGEK S+ ++ +P TS+ +PL+GK+
Sbjct: 238 ILVPCVLISFMVNLVFYLPADSGEKTSVAISVLLAQSVFLLLISKRLPATSMAIPLIGKF 297
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRPA 384
LLF M+LVT+ VV+ + VLN++FR+P THV+ V K+F+E LP++L + RPA
Sbjct: 298 LLFGMVLVTMVVVICVIVLNIHFRTPSTHVLSEGVKKLFLETLPELLHMSRPA 350
Score = 113 (44.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 512 LTPINFLQ-EWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
LT N + W D +LKW+ EE+G + L +P + +WLP+IVL N
Sbjct: 58 LTLSNLISLGWTDNRLKWNAEEFGNISVLRLPPDMVWLPEIVLEN 102
Score = 66 (28.3 bits), Expect = 2.3e-64, Sum P(2) = 2.3e-64
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 17 PSLTFLVFSVIIAQGN---DEAKRLYDDLLSN--YNRLIRPVGNNSDKLTVKMGLKLSQL 71
P LT + + + G+ +E +RL L YN+ +RPV + + + V + L LS L
Sbjct: 4 PVLTLGLLAALAVCGSWGLNEEERLIRHLFQEKGYNKELRPVAHKEESVDVALALTLSNL 63
Query: 72 IEV 74
I +
Sbjct: 64 ISL 66
>UNIPROTKB|F1NJ22 [details] [associations]
symbol:CHRNG "Acetylcholine receptor subunit gamma"
species:9031 "Gallus gallus" [GO:0030054 "cell junction"
evidence=IEA] [GO:0004889 "acetylcholine-activated cation-selective
channel activity" evidence=IEA] [GO:0005892 "acetylcholine-gated
channel complex" evidence=IEA] [GO:0042391 "regulation of membrane
potential" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0042391
GO:GO:0004889 GO:GO:0005892 GeneTree:ENSGT00620000087691
OMA:VFYLLIQ IPI:IPI00577154 EMBL:AADN02020674 EMBL:AADN02020675
ProteinModelPortal:F1NJ22 Ensembl:ENSGALT00000012833 Uniprot:F1NJ22
Length = 516
Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
Identities = 144/373 (38%), Positives = 218/373 (58%)
Query: 19 LTFLVFSVI--IAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNL 76
L L F V+ I+ N E K L DL++NYNR +RP L+ Q+I+V L
Sbjct: 9 LFLLAFCVLPGISCRNQEEK-LLQDLMTNYNRHLRPA------------LRGDQVIDVTL 55
Query: 77 KNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLH--VPSEHIWLP 134
K + TN+ ++ N + + +TTNVW+ +W DY+L+W P++Y + L VPS +WLP
Sbjct: 56 K--LTLTNL-ISLNEREETLTTNVWIEMQWSDYRLRWDPDKYDDIQQLRLRVPSTMVWLP 112
Query: 135 DIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGS 194
DIVL NN DG +E+T+ T +++ DG + W PPAIY+S C I V YFPFD Q C M F S
Sbjct: 113 DIVLENNIDGTFEITLYTNVLVYPDGSIYWLPPAIYRSSCSIHVTYFPFDWQNCTMVFQS 172
Query: 195 WTYDGYTVDLKHILQGPDSDKID-IGIDLQDYYLSVEWDIMKVPA--VRNEKFYSCCEEP 251
TY ++L +L + I+ I ID + + + EW I PA + N ++ +
Sbjct: 173 QTYSANEINL--LLTVEEGQTIEWIFIDPEAFTENGEWAIKHRPARKIINSGRFTPDDIQ 230
Query: 252 YPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSG-EKVSLCXXXXXXXXXX 310
Y +IF + ++RK LFY +N+I+PCV IS ++VLV++LP+ +G +K ++
Sbjct: 231 YQQVIFYLIIQRKPLFYIINIIVPCVLISSMAVLVYFLPAKAGGQKCTVSINVLLAQTVF 290
Query: 311 XXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVF 370
A+ +P TS VPL+GKYL F M++ + VV + VLNV+ R+P TH M V +V+
Sbjct: 291 LFLIAQKVPETSQAVPLIGKYLTFLMVVTVVIVVNAVIVLNVSLRTPNTHSMSQRVRQVW 350
Query: 371 IEVLPKILFIQRP 383
+ +LP+ L + P
Sbjct: 351 LHLLPRYLGMHMP 363
>MGI|MGI:87893 [details] [associations]
symbol:Chrnd "cholinergic receptor, nicotinic, delta
polypeptide" species:10090 "Mus musculus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISO;IGI] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005892
"acetylcholine-gated channel complex" evidence=IDA;IPI] [GO:0006810
"transport" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0006812 "cation transport" evidence=IGI] [GO:0015276
"ligand-gated ion channel activity" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034220
"ion transmembrane transport" evidence=IGI] [GO:0042166
"acetylcholine binding" evidence=IGI] [GO:0042391 "regulation of
membrane potential" evidence=IGI] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0048630 "skeletal muscle tissue growth" evidence=ISO]
[GO:0050881 "musculoskeletal movement" evidence=ISO]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 MGI:MGI:87893
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0042391
HOVERGEN:HBG003756 GO:GO:0004889 GO:GO:0005892 GO:GO:0048630
HOGENOM:HOG000006757 CTD:1144 KO:K04816 OMA:FIVNHMR GO:GO:0050881
eggNOG:NOG294470 EMBL:K02582 EMBL:L10076 EMBL:M22380 EMBL:X13959
IPI:IPI00112987 PIR:A03175 PIR:I49459 RefSeq:NP_067611.2
UniGene:Mm.2811 ProteinModelPortal:P02716 SMR:P02716 STRING:P02716
PhosphoSite:P02716 PRIDE:P02716 Ensembl:ENSMUST00000073252
GeneID:11447 KEGG:mmu:11447 BindingDB:P02716 ChEMBL:CHEMBL4250
NextBio:278756 Bgee:P02716 Genevestigator:P02716
GermOnline:ENSMUSG00000026251 Uniprot:P02716
Length = 520
Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
Identities = 140/360 (38%), Positives = 209/360 (58%)
Query: 31 GNDEAKRLYDDLLSN--YNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVN 88
G +E +RL L + Y++ +RPV DK+ V + L LS LI +LK V
Sbjct: 24 GLNEEQRLIQHLFNEKGYDKDLRPVARKEDKVDVALSLTLSNLI--SLKE--------VE 73
Query: 89 QNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEV 148
+ L TTNVW++ W D +L+W ++G + L +P + +WLP+IVL NN DG++++
Sbjct: 74 ETL-----TTNVWIDHAWVDSRLQWDANDFGNITVLRLPPDMVWLPEIVLENNNDGSFQI 128
Query: 149 TIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDG--YTVDLKH 206
+ +++ G V W PPAI++S C I V YFPFD Q C +KF S Y T+ LK
Sbjct: 129 SYACNVLVYDSGYVTWLPPAIFRSSCPISVTYFPFDWQNCSLKFSSLKYTAKEITLSLKQ 188
Query: 207 ILQGPDSDKID-IGIDLQDYYLSVEWDIMKVPAVRN-EKFYSCCEEPYPDIIFNITLRRK 264
+ S I+ I ID + + + EW+I+ A N + + D+ F + +RRK
Sbjct: 189 EEENNRSYPIEWIIIDPEGFTENGEWEIVHRAAKLNVDPSVPMDSTNHQDVTFYLIIRRK 248
Query: 265 TLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLT 324
LFY +N+++PCV ISF+ LVFYLP D GEK S+ ++ +P TS+
Sbjct: 249 PLFYIINILVPCVLISFMINLVFYLPGDCGEKTSVAISVLLAQSVFLLLISKRLPATSMA 308
Query: 325 VPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRPA 384
+PL+GK+LLF M+LVT+ VV+ + VLN++FR+P THV+ V K F+E LPK+L + RPA
Sbjct: 309 IPLVGKFLLFGMVLVTMVVVICVIVLNIHFRTPSTHVLSEGVKKFFLETLPKLLHMSRPA 368
>RGD|2352 [details] [associations]
symbol:Chrnd "cholinergic receptor, nicotinic, delta (muscle)"
species:10116 "Rattus norvegicus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA;ISO;IDA] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0005892 "acetylcholine-gated channel complex" evidence=IEA;ISO]
[GO:0006812 "cation transport" evidence=ISO] [GO:0015276
"ligand-gated ion channel activity" evidence=IDA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034220 "ion transmembrane transport"
evidence=ISO] [GO:0042166 "acetylcholine binding" evidence=IEA;ISO]
[GO:0042391 "regulation of membrane potential" evidence=IEA;ISO]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0048630
"skeletal muscle tissue growth" evidence=IEA;ISO] [GO:0050881
"musculoskeletal movement" evidence=IEA;ISO] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 RGD:2352 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756
GO:GO:0004889 HOGENOM:HOG000006757 CTD:1144 KO:K04816
eggNOG:NOG294470 EMBL:X74835 EMBL:X66531 IPI:IPI00215183 PIR:S13875
RefSeq:NP_062171.1 UniGene:Rn.41469 PDB:1A11 PDB:1CEK PDBsum:1A11
PDBsum:1CEK ProteinModelPortal:P25110 SMR:P25110 STRING:P25110
PRIDE:P25110 GeneID:54240 KEGG:rno:54240 UCSC:RGD:2352
ChEMBL:CHEMBL3742 EvolutionaryTrace:P25110 NextBio:610696
ArrayExpress:P25110 Genevestigator:P25110
GermOnline:ENSRNOG00000019527 Uniprot:P25110
Length = 517
Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
Identities = 143/374 (38%), Positives = 212/374 (56%)
Query: 17 PSLTFLVFSVIIAQ-GNDEAKRLYDDLLSN--YNRLIRPVGNNSDKLTVKMGLKLSQLIE 73
P+L L V+ G +E +RL L YN+ +RPV D + V + L LS LI
Sbjct: 6 PTLGLLAALVVCGSWGLNEEQRLIQHLFEEKGYNKELRPVARKEDIVDVALSLTLSNLI- 64
Query: 74 VNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWL 133
+LK V + L TTNVW++ W D +L+W+ E+G + L +PS+ +WL
Sbjct: 65 -SLKE--------VEETL-----TTNVWIDHAWIDSRLQWNANEFGNITVLRLPSDMVWL 110
Query: 134 PDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFG 193
P+IVL NN DG+++++ ++ G V W PPAI++S C I V YFPFD Q C +KF
Sbjct: 111 PEIVLENNNDGSFQISYACNVLVSDSGHVTWLPPAIFRSSCPISVTYFPFDWQNCSLKFS 170
Query: 194 SWTYDGYTV--DLKHILQGPDSDKID-IGIDLQDYYLSVEWDIM-KVPAVRNEKFYSCCE 249
S Y + LK + S I+ I ID + + + EW+I+ + V +
Sbjct: 171 SLKYTAKEIRLSLKQEEEDNRSYPIEWIIIDPEGFTENGEWEIVHRAAKVNVDPSVPMDS 230
Query: 250 EPYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXX 309
+ D+ F + +RRK LFY +N+++PCV ISF+ LVFYLP D GEK S+
Sbjct: 231 TNHQDVTFYLIIRRKPLFYIINILVPCVLISFMINLVFYLPGDCGEKTSVAISVLLAQSV 290
Query: 310 XXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKV 369
++ +P TS+ +PL+GK+LLF M+LVT+ VV+ + VLN++FR+P THV+ V K
Sbjct: 291 FLLLISKRLPATSMAIPLVGKFLLFGMVLVTMVVVICVIVLNIHFRTPSTHVLSEGVKKF 350
Query: 370 FIEVLPKILFIQRP 383
F+E LPK+L + RP
Sbjct: 351 FLETLPKLLHMSRP 364
>UNIPROTKB|P25110 [details] [associations]
symbol:Chrnd "Acetylcholine receptor subunit delta"
species:10116 "Rattus norvegicus" [GO:0005892 "acetylcholine-gated
channel complex" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0042166 "acetylcholine binding" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
[GO:0048630 "skeletal muscle tissue growth" evidence=IEA]
[GO:0050881 "musculoskeletal movement" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 RGD:2352
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006757 CTD:1144 KO:K04816 eggNOG:NOG294470
EMBL:X74835 EMBL:X66531 IPI:IPI00215183 PIR:S13875
RefSeq:NP_062171.1 UniGene:Rn.41469 PDB:1A11 PDB:1CEK PDBsum:1A11
PDBsum:1CEK ProteinModelPortal:P25110 SMR:P25110 STRING:P25110
PRIDE:P25110 GeneID:54240 KEGG:rno:54240 UCSC:RGD:2352
ChEMBL:CHEMBL3742 EvolutionaryTrace:P25110 NextBio:610696
ArrayExpress:P25110 Genevestigator:P25110
GermOnline:ENSRNOG00000019527 Uniprot:P25110
Length = 517
Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
Identities = 143/374 (38%), Positives = 212/374 (56%)
Query: 17 PSLTFLVFSVIIAQ-GNDEAKRLYDDLLSN--YNRLIRPVGNNSDKLTVKMGLKLSQLIE 73
P+L L V+ G +E +RL L YN+ +RPV D + V + L LS LI
Sbjct: 6 PTLGLLAALVVCGSWGLNEEQRLIQHLFEEKGYNKELRPVARKEDIVDVALSLTLSNLI- 64
Query: 74 VNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWL 133
+LK V + L TTNVW++ W D +L+W+ E+G + L +PS+ +WL
Sbjct: 65 -SLKE--------VEETL-----TTNVWIDHAWIDSRLQWNANEFGNITVLRLPSDMVWL 110
Query: 134 PDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFG 193
P+IVL NN DG+++++ ++ G V W PPAI++S C I V YFPFD Q C +KF
Sbjct: 111 PEIVLENNNDGSFQISYACNVLVSDSGHVTWLPPAIFRSSCPISVTYFPFDWQNCSLKFS 170
Query: 194 SWTYDGYTV--DLKHILQGPDSDKID-IGIDLQDYYLSVEWDIM-KVPAVRNEKFYSCCE 249
S Y + LK + S I+ I ID + + + EW+I+ + V +
Sbjct: 171 SLKYTAKEIRLSLKQEEEDNRSYPIEWIIIDPEGFTENGEWEIVHRAAKVNVDPSVPMDS 230
Query: 250 EPYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXX 309
+ D+ F + +RRK LFY +N+++PCV ISF+ LVFYLP D GEK S+
Sbjct: 231 TNHQDVTFYLIIRRKPLFYIINILVPCVLISFMINLVFYLPGDCGEKTSVAISVLLAQSV 290
Query: 310 XXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKV 369
++ +P TS+ +PL+GK+LLF M+LVT+ VV+ + VLN++FR+P THV+ V K
Sbjct: 291 FLLLISKRLPATSMAIPLVGKFLLFGMVLVTMVVVICVIVLNIHFRTPSTHVLSEGVKKF 350
Query: 370 FIEVLPKILFIQRP 383
F+E LPK+L + RP
Sbjct: 351 FLETLPKLLHMSRP 364
>WB|WBGene00000058 [details] [associations]
symbol:acr-19 species:6239 "Caenorhabditis elegans"
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0004889 HOGENOM:HOG000006756
GeneTree:ENSGT00630000089708 eggNOG:NOG235631 KO:K05312 EMBL:Z93778
RefSeq:NP_001129756.1 UniGene:Cel.8248 ProteinModelPortal:B3WFZ2
SMR:B3WFZ2 EnsemblMetazoa:C31H5.3b GeneID:191605
KEGG:cel:CELE_C31H5.3 CTD:191605 WormBase:C31H5.3b
InParanoid:B3WFZ2 OMA:RTSASIM NextBio:949650 ArrayExpress:B3WFZ2
Uniprot:B3WFZ2
Length = 560
Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
Identities = 136/360 (37%), Positives = 204/360 (56%)
Query: 25 SVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTN 84
S +I G+ E +RLY L NYN+L RPV N S+ + V +G+ Q+++++ K+QIM +N
Sbjct: 22 SKVIWTGDHE-RRLYAKLAENYNKLARPVRNESEAVVVLLGMDYQQILDIDEKHQIMNSN 80
Query: 85 VWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADG 144
VW+ + W D+ L W P E+G + + +P +IW PD++LYN+ D
Sbjct: 81 VWLRMS---------------WTDHYLTWDPSEFGNIKEVRLPINNIWKPDVLLYNSVDQ 125
Query: 145 NYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
++ T A++ Y G V W PPAI +S C ID+ YFPFD Q C MKFGSWTY G+ DL
Sbjct: 126 QFDSTWPVNAVVLYTGNVTWIPPAIIRSSCAIDIAYFPFDTQHCTMKFGSWTYSGFFTDL 185
Query: 205 KHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRK 264
I+ I Y + EW+++ + + R+ FY CC EPY D+ F +++RR+
Sbjct: 186 -----------INTTISPATYKPNGEWELLGLTSQRSIFFYECCPEPYYDVTFTVSIRRR 234
Query: 265 TLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLT 324
TL+Y NL++PC+ IS L++L F LP+D GEK++L AE +P TS
Sbjct: 235 TLYYGFNLLLPCMLISSLALLSFTLPADCGEKLNLGVTIFMSLCVFMIMVAEAMPQTSDA 294
Query: 325 VPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHV-MKPWVHKVFIEVLPKILFIQRP 383
+PL+ Y M V SVV T+ LN + RSP + M ++ + + LP +L ++RP
Sbjct: 295 LPLIQIYFSCIMFQVGASVVATVIALNFHHRSPEQYKPMNKFLKTLLLGWLPTLLGMERP 354
>UNIPROTKB|F1M519 [details] [associations]
symbol:Chrnd "Acetylcholine receptor subunit delta"
species:10116 "Rattus norvegicus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 RGD:2352 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0042391 GO:GO:0042166
GO:GO:0004889 GO:GO:0005892 GO:GO:0048630 OMA:FIVNHMR GO:GO:0050881
IPI:IPI00392804 ProteinModelPortal:F1M519
Ensembl:ENSRNOT00000036369 ArrayExpress:F1M519 Uniprot:F1M519
Length = 545
Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
Identities = 139/359 (38%), Positives = 206/359 (57%)
Query: 31 GNDEAKRLYDDLLSN--YNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVN 88
G +E +RL L YN+ +RPV D + V + L LS LI +LK V
Sbjct: 49 GLNEEQRLIQHLFEEKGYNKELRPVARKEDIVDVALSLTLSNLI--SLKE--------VE 98
Query: 89 QNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEV 148
+ L TTNVW++ W D +L+W+ E+G + L +PS+ +WLP+IVL NN DG++++
Sbjct: 99 ETL-----TTNVWIDHAWIDSRLQWNANEFGNITVLRLPSDMVWLPEIVLENNNDGSFQI 153
Query: 149 TIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTV--DLKH 206
+ ++ G V W PPAI++S C I V YFPFD Q C +KF S Y + LK
Sbjct: 154 SYACNVLVSDSGHVTWLPPAIFRSSCPISVTYFPFDWQNCSLKFSSLKYTAKEIRLSLKQ 213
Query: 207 ILQGPDSDKID-IGIDLQDYYLSVEWDIM-KVPAVRNEKFYSCCEEPYPDIIFNITLRRK 264
+ S I+ I ID + + + EW+I+ + V + + D+ F + +RRK
Sbjct: 214 EEEDNRSYPIEWIIIDPEGFTENGEWEIVHRAAKVNVDPSVPMDSTNHQDVTFYLIIRRK 273
Query: 265 TLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLT 324
LFY +N+++PCV ISF+ LVFYLP D GEK S+ ++ +P TS+
Sbjct: 274 PLFYIINILVPCVLISFMINLVFYLPGDCGEKTSVAISVLLAQSVFLLLISKRLPATSMA 333
Query: 325 VPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
+PL+GK+LLF M+LVT+ VV+ + VLN++FR+P THV+ V K F+E LPK+L + RP
Sbjct: 334 IPLVGKFLLFGMVLVTMVVVICVIVLNIHFRTPSTHVLSEGVKKFFLETLPKLLHMSRP 392
>UNIPROTKB|Q04844 [details] [associations]
symbol:CHRNE "Acetylcholine receptor subunit epsilon"
species:9606 "Homo sapiens" [GO:0030054 "cell junction"
evidence=IEA] [GO:0004889 "acetylcholine-activated cation-selective
channel activity" evidence=IEA] [GO:0042391 "regulation of membrane
potential" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0006936 "muscle contraction" evidence=TAS]
[GO:0015464 "acetylcholine receptor activity" evidence=TAS]
[GO:0005887 "integral to plasma membrane" evidence=TAS] [GO:0005892
"acetylcholine-gated channel complex" evidence=TAS] [GO:0006810
"transport" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0007271 "synaptic transmission, cholinergic"
evidence=TAS] [GO:0008324 "cation transmembrane transporter
activity" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0006812
"cation transport" evidence=TAS] Reactome:REACT_13685
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 EMBL:CH471108
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0007271 GO:GO:0042391
HOVERGEN:HBG003756 GO:GO:0004889 GO:GO:0005892 GO:GO:0015464
MIM:254200 MIM:601462 MIM:608930 Orphanet:98913
HOGENOM:HOG000006757 GO:GO:0006936 MIM:608931 eggNOG:NOG291810
CTD:1145 KO:K04817 OMA:AIYRSTC EMBL:X66403 EMBL:AF105999
IPI:IPI00029753 PIR:S34775 RefSeq:NP_000071.1 UniGene:Hs.654535
PDB:2DF9 PDBsum:2DF9 ProteinModelPortal:Q04844 SMR:Q04844
STRING:Q04844 DMDM:1168301 PRIDE:Q04844 Ensembl:ENST00000293780
GeneID:1145 KEGG:hsa:1145 UCSC:uc002fzk.1 GeneCards:GC17M004801
H-InvDB:HIX0027273 HGNC:HGNC:1966 MIM:100725 neXtProt:NX_Q04844
PharmGKB:PA26498 InParanoid:Q04844 OrthoDB:EOG4DZ1V6
PhylomeDB:Q04844 BindingDB:Q04844 ChEMBL:CHEMBL2484 GenomeRNAi:1145
NextBio:4764 ArrayExpress:Q04844 Bgee:Q04844 CleanEx:HS_CHRNE
Genevestigator:Q04844 GermOnline:ENSG00000108556 Uniprot:Q04844
Length = 493
Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
Identities = 135/352 (38%), Positives = 206/352 (58%)
Query: 31 GNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQN 90
G +E RLY L +NY+ RPV D +T+ + + L+ LI +N K + +TT+VW+
Sbjct: 20 GKNEELRLYHHLFNNYDPGSRPVREPEDTVTISLKVTLTNLISLNEKEETLTTSVWIGI- 78
Query: 91 LKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTI 150
+W+DY+L +S +++GG++TL VPSE +WLP+IVL NN DG + V
Sbjct: 79 --------------DWQDYRLNYSKDDFGGIETLRVPSELVWLPEIVLENNIDGQFGVAY 124
Query: 151 MTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQ- 209
+++ G V W PPAIY+S C ++V YFPFD Q C + F S TY+ V+ +
Sbjct: 125 DANVLVYEGGSVTWLPPAIYRSVCAVEVTYFPFDWQNCSLIFRSQTYNAEEVEFTFAVDN 184
Query: 210 -GPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEP-YPDIIFNITLRRKTLF 267
G +KIDI D + Y + EW I P V + P D+I+++ +RRK LF
Sbjct: 185 DGKTINKIDI--DTEAYTENGEWAIDFCPGVIRRHHGGATDGPGETDVIYSLIIRRKPLF 242
Query: 268 YTVNLIIPCVGISFLSVLVFYLPSDSG-EKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVP 326
Y +N+I+PCV IS L +L ++LP+ +G +K ++ A+ IP TSL+VP
Sbjct: 243 YVINIIVPCVLISGLVLLAYFLPAQAGGQKCTVSINVLLAQTVFLFLIAQKIPETSLSVP 302
Query: 327 LLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKIL 378
LLG++L+F M++ TL V+ + VLNV+ R+P TH M P + V +E+LP++L
Sbjct: 303 LLGRFLIFVMVVATLIVMNCVIVLNVSQRTPTTHAMSPRLRHVLLELLPRLL 354
Score = 132 (51.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 20/36 (55%), Positives = 31/36 (86%)
Query: 520 EWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+W+DY+L +S +++GG++TL VPSE +WLP+IVL N
Sbjct: 79 DWQDYRLNYSKDDFGGIETLRVPSELVWLPEIVLEN 114
>RGD|2353 [details] [associations]
symbol:Chrne "cholinergic receptor, nicotinic, epsilon (muscle)"
species:10116 "Rattus norvegicus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0042391 "regulation of membrane
potential" evidence=IEA;ISO] [GO:0045211 "postsynaptic membrane"
evidence=IEA;ISO] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 RGD:2353
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
GO:GO:0042391 HOVERGEN:HBG003756 GO:GO:0004889 HOGENOM:HOG000006757
eggNOG:NOG291810 CTD:1145 KO:K04817 OrthoDB:EOG4DZ1V6 EMBL:X74836
EMBL:X13252 EMBL:Z23062 EMBL:X06365 IPI:IPI00188510 PIR:S01959
RefSeq:NP_058890.1 UniGene:Rn.10301 ProteinModelPortal:P09660
SMR:P09660 STRING:P09660 PRIDE:P09660 GeneID:29422 KEGG:rno:29422
UCSC:RGD:2353 InParanoid:P09660 ChEMBL:CHEMBL4961 NextBio:609114
Genevestigator:P09660 GermOnline:ENSRNOG00000003777 Uniprot:P09660
Length = 494
Score = 643 (231.4 bits), Expect = 5.4e-63, P = 5.4e-63
Identities = 135/358 (37%), Positives = 207/358 (57%)
Query: 29 AQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVN 88
+QG +E LY L NY+ RPV D +T+ + + L+ LI +N K + +TT+VW+
Sbjct: 18 SQGKNEELSLYHHLFDNYDPECRPVRRPEDTVTITLKVTLTNLISLNEKEETLTTSVWIG 77
Query: 89 QNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEV 148
EW+DY+L +S +++ GV+ L VPSEH+WLP+IVL NN DG + V
Sbjct: 78 I---------------EWQDYRLNFSKDDFAGVEILRVPSEHVWLPEIVLENNIDGQFGV 122
Query: 149 TIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHIL 208
+++ G V W PPAIY+S C ++V YFPFD Q C + F S TY+ V+L +
Sbjct: 123 AYDCNVLVYEGGSVSWLPPAIYRSTCAVEVTYFPFDWQNCSLIFRSQTYNAEEVELIFAV 182
Query: 209 QGPDSDKID-IGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEP-YPDIIFNITLRRKTL 266
D + I+ I ID + + EW I P + E+P D+I+ + +RRK L
Sbjct: 183 DD-DGNAINKIDIDTAAFTENGEWAIDYCPGMIRHYEGGSTEDPGETDVIYTLIIRRKPL 241
Query: 267 FYTVNLIIPCVGISFLSVLVFYLPSDSG-EKVSLCXXXXXXXXXXXXXXAEIIPPTSLTV 325
FY +N+I+PCV IS L +L ++LP+ +G +K ++ A+ IP TSL+V
Sbjct: 242 FYVINIIVPCVLISGLVLLAYFLPAQAGGQKCTVSINVLLAQTVFLFLIAQKIPETSLSV 301
Query: 326 PLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
PLLG+YL+F M++ TL V+ + VLNV+ R+P TH P + ++ +E+LP++L + P
Sbjct: 302 PLLGRYLIFVMVVATLIVMNCVIVLNVSLRTPTTHATSPRLRQILLELLPRLLGLSPP 359
Score = 134 (52.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 21/36 (58%), Positives = 30/36 (83%)
Query: 520 EWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
EW+DY+L +S +++ GV+ L VPSEH+WLP+IVL N
Sbjct: 79 EWQDYRLNFSKDDFAGVEILRVPSEHVWLPEIVLEN 114
>UNIPROTKB|P09660 [details] [associations]
symbol:Chrne "Acetylcholine receptor subunit epsilon"
species:10116 "Rattus norvegicus" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 RGD:2353
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0042391 HOVERGEN:HBG003756 GO:GO:0004889
HOGENOM:HOG000006757 eggNOG:NOG291810 CTD:1145 KO:K04817
OrthoDB:EOG4DZ1V6 EMBL:X74836 EMBL:X13252 EMBL:Z23062 EMBL:X06365
IPI:IPI00188510 PIR:S01959 RefSeq:NP_058890.1 UniGene:Rn.10301
ProteinModelPortal:P09660 SMR:P09660 STRING:P09660 PRIDE:P09660
GeneID:29422 KEGG:rno:29422 UCSC:RGD:2353 InParanoid:P09660
ChEMBL:CHEMBL4961 NextBio:609114 Genevestigator:P09660
GermOnline:ENSRNOG00000003777 Uniprot:P09660
Length = 494
Score = 643 (231.4 bits), Expect = 5.4e-63, P = 5.4e-63
Identities = 135/358 (37%), Positives = 207/358 (57%)
Query: 29 AQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVN 88
+QG +E LY L NY+ RPV D +T+ + + L+ LI +N K + +TT+VW+
Sbjct: 18 SQGKNEELSLYHHLFDNYDPECRPVRRPEDTVTITLKVTLTNLISLNEKEETLTTSVWIG 77
Query: 89 QNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEV 148
EW+DY+L +S +++ GV+ L VPSEH+WLP+IVL NN DG + V
Sbjct: 78 I---------------EWQDYRLNFSKDDFAGVEILRVPSEHVWLPEIVLENNIDGQFGV 122
Query: 149 TIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHIL 208
+++ G V W PPAIY+S C ++V YFPFD Q C + F S TY+ V+L +
Sbjct: 123 AYDCNVLVYEGGSVSWLPPAIYRSTCAVEVTYFPFDWQNCSLIFRSQTYNAEEVELIFAV 182
Query: 209 QGPDSDKID-IGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEP-YPDIIFNITLRRKTL 266
D + I+ I ID + + EW I P + E+P D+I+ + +RRK L
Sbjct: 183 DD-DGNAINKIDIDTAAFTENGEWAIDYCPGMIRHYEGGSTEDPGETDVIYTLIIRRKPL 241
Query: 267 FYTVNLIIPCVGISFLSVLVFYLPSDSG-EKVSLCXXXXXXXXXXXXXXAEIIPPTSLTV 325
FY +N+I+PCV IS L +L ++LP+ +G +K ++ A+ IP TSL+V
Sbjct: 242 FYVINIIVPCVLISGLVLLAYFLPAQAGGQKCTVSINVLLAQTVFLFLIAQKIPETSLSV 301
Query: 326 PLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
PLLG+YL+F M++ TL V+ + VLNV+ R+P TH P + ++ +E+LP++L + P
Sbjct: 302 PLLGRYLIFVMVVATLIVMNCVIVLNVSLRTPTTHATSPRLRQILLELLPRLLGLSPP 359
Score = 134 (52.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 21/36 (58%), Positives = 30/36 (83%)
Query: 520 EWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
EW+DY+L +S +++ GV+ L VPSEH+WLP+IVL N
Sbjct: 79 EWQDYRLNFSKDDFAGVEILRVPSEHVWLPEIVLEN 114
>ZFIN|ZDB-GENE-030131-6665 [details] [associations]
symbol:chrnd "cholinergic receptor, nicotinic,
delta polypeptide" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004889 "acetylcholine-activated cation-selective
channel activity" evidence=IEA;IMP] [GO:0030239 "myofibril
assembly" evidence=IMP] [GO:0005886 "plasma membrane"
evidence=IEA;IDA] [GO:0005892 "acetylcholine-gated channel complex"
evidence=ISS] [GO:0030054 "cell junction" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 ZFIN:ZDB-GENE-030131-6665 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030239 HOVERGEN:HBG003756
GO:GO:0004889 GO:GO:0005892 HOGENOM:HOG000006757
GeneTree:ENSGT00620000087691 CTD:1144 KO:K04816 OMA:FIVNHMR
EMBL:CU929293 EMBL:AB120372 IPI:IPI00862165 RefSeq:NP_996947.1
UniGene:Dr.87 HSSP:P25110 SMR:Q75XT1 STRING:Q75XT1
Ensembl:ENSDART00000015391 GeneID:404273 KEGG:dre:404273
InParanoid:Q75XT1 NextBio:20817635 Uniprot:Q75XT1
Length = 518
Score = 643 (231.4 bits), Expect = 5.4e-63, P = 5.4e-63
Identities = 144/377 (38%), Positives = 220/377 (58%)
Query: 14 VLFPSLTFLVFSVIIAQGNDEAKRLYDDLLSN--YNRLIRPVGNNSDKLTVKMGLKLSQL 71
+L SL +F G +E +RL + L YN+ +RPV N + + + + L LS L
Sbjct: 6 LLTASLLCFIFQECC--GRNEEERLINYLFKERGYNKELRPVQNKDETVDIYLALTLSNL 63
Query: 72 IEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHI 131
I +LK V++ L TNVW+ W+D++L W+ EY + L +P +
Sbjct: 64 I--SLKE--------VDETL-----LTNVWMEHGWKDHRLTWNESEYD-IPVLRLPPSMV 107
Query: 132 WLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMK 191
WLP+IVL NN D ++V +++ G + W PPAI++S C I+V YFPFD Q C +K
Sbjct: 108 WLPEIVLENNNDAQFQVAYYCNVLIYSSGDMYWLPPAIFRSSCSINVNYFPFDWQNCSLK 167
Query: 192 FGSWTYDGYTVDLKHILQGPDSD--KID-IGIDLQDYYLSVEWDIMKVPAVRNEKFYSCC 248
F S TY+ + L ++ ++ K++ I ID + + + EW+I+ PA RN + S
Sbjct: 168 FSSLTYNAKEISLNLKMEQENTTYYKVEWIIIDPEGFTENGEWEIVHKPARRNI-YKSIP 226
Query: 249 EEP--YPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXX 306
+E + DI F + ++RK LFY VN+IIPCV ISFL+ LV+YLP+DSGEK++L
Sbjct: 227 KESNKHQDITFYLIIKRKPLFYIVNIIIPCVLISFLASLVYYLPADSGEKMTLSISVLLA 286
Query: 307 XXXXXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWV 366
++ +P TS+ VPL+ KYL+F M+LVT+ V+ + VLN++FR+P THVM W
Sbjct: 287 QSVFLLLISQRLPETSMAVPLIVKYLMFIMVLVTVVVLNCVIVLNLHFRTPSTHVMTEWT 346
Query: 367 HKVFIEVLPKILFIQRP 383
+ F+E LP++L + P
Sbjct: 347 KEFFLERLPRLLHMSLP 363
>UNIPROTKB|F1SMT3 [details] [associations]
symbol:CHRND "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050881 "musculoskeletal movement" evidence=IEA]
[GO:0048630 "skeletal muscle tissue growth" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
[GO:0042166 "acetylcholine binding" evidence=IEA] [GO:0005892
"acetylcholine-gated channel complex" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0042391 GO:GO:0042166
GO:GO:0004889 GO:GO:0005892 GO:GO:0048630
GeneTree:ENSGT00620000087691 CTD:1144 KO:K04816 OMA:FIVNHMR
GO:GO:0050881 EMBL:CU855838 RefSeq:XP_003133778.3
Ensembl:ENSSSCT00000017736 GeneID:100522042 KEGG:ssc:100522042
Uniprot:F1SMT3
Length = 517
Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
Identities = 137/358 (38%), Positives = 209/358 (58%)
Query: 33 DEAKRLYDDLLSN--YNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQN 90
+E +RL L YN+ +RPV + + + V + L LS LI +LK V +
Sbjct: 23 NEEERLIRYLFEEKGYNKELRPVAHKEESVEVTLALTLSNLI--SLKE--------VEET 72
Query: 91 LKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTI 150
L TTNVW+ W D +L+W+ E+G + L +PS+ +WLP+IVL NN DG+++++
Sbjct: 73 L-----TTNVWIEHGWTDSRLQWNAGEFGNISVLRLPSDMVWLPEIVLENNNDGSFQISY 127
Query: 151 MTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDG--YTVDLKHIL 208
++ G V W PPAI++S C I V YFPFD Q C +KF S Y T+ LK
Sbjct: 128 SCNVLVDPSGYVYWLPPAIFRSSCPISVTYFPFDWQNCSLKFSSLKYTAKEITLSLKQEK 187
Query: 209 QGPDSDKID-IGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPY-PDIIFNITLRRKTL 266
+ ++ I ID + + + EW+I+ PA N + + P D+ F + +RRK L
Sbjct: 188 KDERYYPVEWIIIDPEGFTENGEWEIVHRPARVNVDPSAPLDSPSRQDVTFYLIIRRKPL 247
Query: 267 FYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVP 326
FY +N+++PCV ISF+ LVFYLP+D GEK S+ ++ +P TS+ +P
Sbjct: 248 FYVINILVPCVLISFMINLVFYLPADCGEKTSMAISVLLAQSVFLLLISKRLPATSMAIP 307
Query: 327 LLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRPA 384
L+GK+LLF M+LV + VV+ + VLN++FR+P THV+ V ++F+E LP++L + RPA
Sbjct: 308 LIGKFLLFGMVLVAMVVVICVIVLNIHFRTPSTHVLSDGVKQLFLETLPEVLHMSRPA 365
>ZFIN|ZDB-GENE-040808-32 [details] [associations]
symbol:chrne "cholinergic receptor, nicotinic,
epsilon" species:7955 "Danio rerio" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0007271 "synaptic transmission,
cholinergic" evidence=IDA] [GO:0005892 "acetylcholine-gated channel
complex" evidence=IDA] [GO:0015464 "acetylcholine receptor
activity" evidence=IDA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 ZFIN:ZDB-GENE-040808-32 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0007271 GO:GO:0004889 GO:GO:0005892
EMBL:JN242071 UniGene:Dr.85037 Uniprot:G1FMQ0
Length = 517
Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
Identities = 137/362 (37%), Positives = 214/362 (59%)
Query: 22 LVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIM 81
L+ +V+ GN+E++ L D NY++ IRP + +K+ V++ L L+ LI +N K + +
Sbjct: 17 LLATVLQVTGNEESQ-LIADKFKNYSKNIRPARHADEKVKVQVKLTLTNLISLNEKEETL 75
Query: 82 TTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNN 141
TTNVW+ +I +W DY+L W+ EY ++ + VP +WLPDIVL NN
Sbjct: 76 TTNVWI------EI---------QWHDYRLAWNTSEYHDIEQIRVPYYTVWLPDIVLENN 120
Query: 142 ADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYT 201
DG ++V ++ YDG + W PPAIY+S C I++ YFPFD Q C + F S TY
Sbjct: 121 IDGKFDVAYYANVLISYDGSMYWLPPAIYRSTCAIEITYFPFDWQNCTLVFRSQTYSANE 180
Query: 202 VDLKHILQGPDSDK-ID-IGIDLQDYYLSVEWDIMKVPA--VRNEKFYSCCEEPYPDIIF 257
+D+ +L ++ K I+ + ID + + + EW I PA + N++ YS + Y ++ +
Sbjct: 181 IDI--VLAEDENGKPIEWVDIDPEAFTENGEWAIKHRPARKLTNQR-YSPDDLEYQEVYY 237
Query: 258 NITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSG-EKVSLCXXXXXXXXXXXXXXAE 316
NI ++RK LFY +N+I+PC IS L VL ++LP+ +G +K+++ ++
Sbjct: 238 NIIIQRKPLFYVINIILPCSLISSLVVLAYFLPAKAGGQKLTVSISVLLAQTVFLILISQ 297
Query: 317 IIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPK 376
IP TSL+VPL+GKYL+F M + TL V I VLN + RSP TH M + +F+EV+P+
Sbjct: 298 KIPETSLSVPLIGKYLIFVMSMTTLIVTNCIIVLNYSLRSPSTHNMSQSIKHIFLEVVPR 357
Query: 377 IL 378
L
Sbjct: 358 YL 359
>UNIPROTKB|F1Q3W1 [details] [associations]
symbol:CHRNE "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0004889 GeneTree:ENSGT00620000087691
OMA:AIYRSTC EMBL:AAEX03003590 Ensembl:ENSCAFT00000025084
Uniprot:F1Q3W1
Length = 493
Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
Identities = 136/358 (37%), Positives = 203/358 (56%)
Query: 29 AQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVN 88
A+ +E LY L NY+ RPV D +T+ + + L+ LI +N K + +TT+VW+
Sbjct: 19 AEAKNEELHLYHHLFDNYDPGSRPVKEPEDTVTITLKVTLTNLISLNEKEETLTTSVWIG 78
Query: 89 QNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEV 148
+W+DY+L +S +++GGV+TL VPSE +WLP+IVL NN DG + V
Sbjct: 79 I---------------DWQDYRLNYSKDDFGGVETLRVPSELVWLPEIVLENNIDGQFGV 123
Query: 149 TIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHIL 208
+++ G V W PPAIY+S C ++V YFPFD Q C + F S TY+ VD +
Sbjct: 124 AYDANVLIYEGGYVSWLPPAIYRSTCAVEVTYFPFDWQNCSLVFRSQTYNAEEVDFVFAV 183
Query: 209 QGPDSDKID-IGIDLQDYYLSVEWDIMKVPA-VRNEKFYSCCEEPYPDIIFNITLRRKTL 266
D + I I ID + Y + EW I P +R S + DII+ + +RRK L
Sbjct: 184 DD-DGETISKIDIDTEAYTENGEWAIDFCPGLIRRPNGASAGDPGVVDIIYTLIIRRKPL 242
Query: 267 FYTVNLIIPCVGISFLSVLVFYLPSDSG-EKVSLCXXXXXXXXXXXXXXAEIIPPTSLTV 325
FY +N+I+PCV IS L +L ++LP+ +G +K ++ A+ IP TSL+V
Sbjct: 243 FYVINIIVPCVLISGLVLLAYFLPAQAGGQKCTVSINVLLAQTVFLFLIAQKIPETSLSV 302
Query: 326 PLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
P+LG+YL+F M++ T+ V+ + VLNV+ R+P TH M P + V +E LP +L P
Sbjct: 303 PMLGRYLIFVMVVATIIVMNCVIVLNVSLRTPTTHAMSPRLRHVLLEQLPSLLGSSAP 360
Score = 133 (51.9 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 21/36 (58%), Positives = 31/36 (86%)
Query: 520 EWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+W+DY+L +S +++GGV+TL VPSE +WLP+IVL N
Sbjct: 80 DWQDYRLNYSKDDFGGVETLRVPSELVWLPEIVLEN 115
>WB|WBGene00043066 [details] [associations]
symbol:acr-25 species:6239 "Caenorhabditis elegans"
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0004889 HOGENOM:HOG000006756
GeneTree:ENSGT00630000089708 EMBL:FO081731 RefSeq:NP_001023570.2
UniGene:Cel.37052 ProteinModelPortal:Q65XS8 SMR:Q65XS8
EnsemblMetazoa:Y73B6BL.42 GeneID:3565563 KEGG:cel:CELE_Y73B6BL.42
UCSC:Y73B6BL.42 CTD:3565563 WormBase:Y73B6BL.42 eggNOG:NOG324576
InParanoid:Q65XS8 OMA:RICMVIF NextBio:956957 Uniprot:Q65XS8
Length = 544
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 129/348 (37%), Positives = 197/348 (56%)
Query: 38 LYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMT 97
LY +LL +Y L RP+ N+S+ + VKMGL L Q+++V+ KNQ++ N W+ +
Sbjct: 29 LYTELLEDYEPLERPIENSSEAVMVKMGLVLQQIVDVDEKNQVVDVNAWLKFS------- 81
Query: 98 TNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILH 157
W DY LKW PE+YGGV L +W PD+++YN+AD ++ + +++
Sbjct: 82 --------WVDYSLKWKPEDYGGVTDLRFRKGQLWTPDVLMYNSADPQFDSRYASNLLVY 133
Query: 158 YDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSDKID 217
+G V W PP +Y+ C+I V +FPFDVQ C +KFGSWT+DG ++L + D D
Sbjct: 134 PNGLVNWMPPGLYRLSCKIQVVWFPFDVQECFLKFGSWTFDGTKLNL-------EID--D 184
Query: 218 IGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLIIPCV 277
G D+ +Y + EW + RN ++Y CC EPY D++F +RR+ L+Y NLI+PC+
Sbjct: 185 NGFDISNYMQNGEWTLEGTTVKRNIQYYQCCPEPYYDLVFTFVIRRRALYYAFNLILPCI 244
Query: 278 GISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLFTMI 337
I+ L+++ F P D+GEK+SL AE+ PPTS VP L + F +
Sbjct: 245 LITMLTLVGFTFPPDAGEKMSLQITIMLSICIFQNYVAELSPPTSEAVPFLSAF--FAVC 302
Query: 338 LVTLSVVVTIAVLNVNF--RSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
L T + VT L +NF R+ +H M + +E +P +L ++RP
Sbjct: 303 LFTCACCVTATTLALNFHHRTGKSHQMNNTFRLLMLEWIPWLLMMRRP 350
Score = 120 (47.3 bits), Expect = 0.00059, P = 0.00059
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 521 WEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
W DY LKW PE+YGGV L +W PD+++YN
Sbjct: 82 WVDYSLKWKPEDYGGVTDLRFRKGQLWTPDVLMYN 116
>UNIPROTKB|B7Z5H1 [details] [associations]
symbol:CHRNB1 "cDNA FLJ52354, highly similar to
Acetylcholine receptor protein subunit beta" species:9606 "Homo
sapiens" [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005892 "acetylcholine-gated channel complex"
evidence=IEA] [GO:0042166 "acetylcholine binding" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0042391 GO:GO:0042166 HOVERGEN:HBG003756
GO:GO:0004889 GO:GO:0005892 UniGene:Hs.330386 HGNC:HGNC:1961
EMBL:AC113189 EMBL:AK298938 IPI:IPI01013096 SMR:B7Z5H1
STRING:B7Z5H1 Ensembl:ENST00000536404 Uniprot:B7Z5H1
Length = 429
Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
Identities = 124/292 (42%), Positives = 181/292 (61%)
Query: 96 MTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAI 155
M+T V+++ EW DY+L W P E+ G+D+L + +E +WLPD+VL NN DGN++V + +
Sbjct: 1 MSTKVYLDLEWTDYRLSWDPAEHDGIDSLRITAESVWLPDVVLLNNNDGNFDVALDISVV 60
Query: 156 LHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSD- 214
+ DG V W PP IY+S C I V YFPFD Q C M F S++YD V L+ L GPD
Sbjct: 61 VSSDGSVRWQPPGIYRSSCSIQVTYFPFDWQNCTMVFSSYSYDSSEVSLQTGL-GPDGQG 119
Query: 215 KIDIGIDLQDYYLSVEWDIMKVPAVRNEKF---YSCCEEPYPDIIFNITLRRKTLFYTVN 271
+I I + + +W+I+ P+ + E ++IF + +RRK LFY VN
Sbjct: 120 HQEIHIHEGTFIENGQWEIIHKPSRLIQPPGDPRGGREGQRQEVIFYLIIRRKPLFYLVN 179
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
+I PC+ I+ L++ VFYLP D+GEK+ L A+ +P TSL+VP++ KY
Sbjct: 180 VIAPCILITLLAIFVFYLPPDAGEKMGLSIFALLTLTVFLLLLADKVPETSLSVPIIIKY 239
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
L+FTM+LVT SV++++ VLN++ RSP TH M WV ++FI LP L ++RP
Sbjct: 240 LMFTMVLVTFSVILSVVVLNLHHRSPHTHQMPLWVRQIFIHKLPLYLRLKRP 291
Score = 131 (51.2 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 19/36 (52%), Positives = 27/36 (75%)
Query: 520 EWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
EW DY+L W P E+ G+D+L + +E +WLPD+VL N
Sbjct: 10 EWTDYRLSWDPAEHDGIDSLRITAESVWLPDVVLLN 45
>UNIPROTKB|F1RZI3 [details] [associations]
symbol:F1RZI3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0004889 GeneTree:ENSGT00630000089708
EMBL:CU469346 Ensembl:ENSSSCT00000017388 ArrayExpress:F1RZI3
Uniprot:F1RZI3
Length = 457
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 131/320 (40%), Positives = 192/320 (60%)
Query: 70 QLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEW-EDYKLKWSPEEYGGVDTLHVPS 128
Q +EV + Q++ +N + NQI+TTNV + Q W L W ++ +L S
Sbjct: 46 QAVEVTVGLQLIQL---INVDEVNQIVTTNVRLKQPWCPPNVLHWDMVDWQYCVSLRSAS 102
Query: 129 EHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTC 188
++ ++ LY ADG++ + TK +L Y G + W PPAI+KS+CEI V +FPFD Q C
Sbjct: 103 LFLFCIEVQLYYFADGDFAIVKFTKVLLDYTGHITWTPPAIFKSYCEIIVTHFPFDEQNC 162
Query: 189 VMKFGSWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCC 248
MK G+WTYDG V + P+SD+ D L ++ S EW I + ++ Y+CC
Sbjct: 163 SMKLGTWTYDGSVVAIN-----PESDQPD----LSNFMESGEWVIKEARGWKHRVLYACC 213
Query: 249 EE-PYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXX 307
PY DI ++ ++R L++ VN+IIPC+ SFL+ LVFYLP+DSGEK++L
Sbjct: 214 PSTPYLDITYHFVMQRLPLYFIVNVIIPCLLFSFLTGLVFYLPTDSGEKMTLSISVLLSL 273
Query: 308 XXXXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVH 367
E+IP TS VPL+GKY+LFTM+ V S+++T+ V+N + RSP THVM WV
Sbjct: 274 TVFLLVIVELIPSTSSAVPLIGKYMLFTMVFVIASIIITVIVINTHHRSPSTHVMPEWVR 333
Query: 368 KVFIEVLPKILF---IQRPA 384
KVFI+ +P I+F ++RP+
Sbjct: 334 KVFIDTIPNIMFFSTMKRPS 353
Score = 313 (115.2 bits), Expect = 5.0e-26, P = 5.0e-26
Identities = 74/195 (37%), Positives = 109/195 (55%)
Query: 18 SLTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLK 77
S++F V + ++ G++ RL L +YN ++RPV ++ + V +GL+L QLI V+
Sbjct: 7 SVSFAVSAGLVL-GSEHETRLVAKLFEDYNSVVRPVEDHRQAVEVTVGLQLIQLINVDEV 65
Query: 78 NQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIV 137
NQI+TTNV LK NV W+ + W +Y +L S ++ ++
Sbjct: 66 NQIVTTNV----RLKQPWCPPNVL---HWD--MVDW---QY--CVSLRSASLFLFCIEVQ 111
Query: 138 LYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTY 197
LY ADG++ + TK +L Y G + W PPAI+KS+CEI V +FPFD Q C MK G+WTY
Sbjct: 112 LYYFADGDFAIVKFTKVLLDYTGHITWTPPAIFKSYCEIIVTHFPFDEQNCSMKLGTWTY 171
Query: 198 DGYTVDLKHILQGPD 212
DG V + PD
Sbjct: 172 DGSVVAINPESDQPD 186
>WB|WBGene00000060 [details] [associations]
symbol:acr-21 species:6239 "Caenorhabditis elegans"
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00570000078866 GO:GO:0004889
eggNOG:NOG306809 HOGENOM:HOG000006756 KO:K05312 EMBL:FO080465
RefSeq:NP_498452.3 UniGene:Cel.23702 ProteinModelPortal:Q9N5U8
SMR:Q9N5U8 EnsemblMetazoa:F27B3.2 GeneID:185004
KEGG:cel:CELE_F27B3.2 UCSC:F27B3.2 CTD:185004 WormBase:F27B3.2
InParanoid:Q9N5U8 OMA:ALEWQQV NextBio:926724 Uniprot:Q9N5U8
Length = 469
Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
Identities = 121/309 (39%), Positives = 186/309 (60%)
Query: 74 VNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWL 133
+N+ T + ++ + +NQI+TTN W+ W DYKL W P Y V +H+PS+ IW
Sbjct: 25 INVTFVFSLTQI-IDVDERNQILTTNSWIRLHWVDYKLVWDPRLYQNVTRIHIPSDKIWK 83
Query: 134 PDIVLYNNADGNYEVTIM-TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKF 192
PDI+LYNNAD Y ++M T I+ Y G + W AI+ S C +DV+++PFD QTC++K+
Sbjct: 84 PDIILYNNADAQYMKSVMSTDVIVDYLGNIHWPLSAIFTSSCPLDVKHYPFDRQTCILKY 143
Query: 193 GSWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPY 252
SW YDG +DL +L K + G DL +Y + EW ++ + A +N+ YSCC EPY
Sbjct: 144 ASWAYDGTKIDL--LL------KSEQG-DLTNYITNTEWSLIGIRAEKNQVIYSCCPEPY 194
Query: 253 PDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXX 312
P I ++T+ R+ +FY NLI+PCV IS ++++ FY+P+DSGEKV+L
Sbjct: 195 PFIDVHVTIERRAMFYVFNLILPCVLISLIALMGFYMPTDSGEKVTLGITSLLSTTVFLM 254
Query: 313 XXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIE 372
AE +PPT+ +PL+G Y T++LV L +T+ +N++ + + P++
Sbjct: 255 MVAEGMPPTAEALPLIGIYFGVTIMLVALGTAMTVFTVNIHHTGVHGYPVPPFLQIFAFR 314
Query: 373 VLPKILFIQ 381
L KILF++
Sbjct: 315 YLSKILFVR 323
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 74/179 (41%), Positives = 107/179 (59%)
Query: 37 RLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIM 96
RLY DLL +YN +RP ++ + + V L+Q+I+V+ +NQI+TTN W+ +
Sbjct: 2 RLYRDLLYDYNNEVRPSVHSKEPINVTFVFSLTQIIDVDERNQILTTNSWIRLH------ 55
Query: 97 TTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM-TKAI 155
W DYKL W P Y V +H+PS+ IW PDI+LYNNAD Y ++M T I
Sbjct: 56 ---------WVDYKLVWDPRLYQNVTRIHIPSDKIWKPDIILYNNADAQYMKSVMSTDVI 106
Query: 156 LHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSD 214
+ Y G + W AI+ S C +DV+++PFD QTC++K+ SW YDG +DL +L+ D
Sbjct: 107 VDYLGNIHWPLSAIFTSSCPLDVKHYPFDRQTCILKYASWAYDGTKIDL--LLKSEQGD 163
Score = 129 (50.5 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 511 LLTPINFLQ-EWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+LT ++++ W DYKL W P Y V +H+PS+ IW PDI+LYN
Sbjct: 45 ILTTNSWIRLHWVDYKLVWDPRLYQNVTRIHIPSDKIWKPDIILYN 90
>UNIPROTKB|F1M7L0 [details] [associations]
symbol:Chrna7 "Neuronal acetylcholine receptor subunit
alpha-7" species:10116 "Rattus norvegicus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 RGD:2348 GO:GO:0016021 GO:GO:0009897 GO:GO:0016324
GO:GO:0007613 GO:GO:0035095 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0050728 GO:GO:0006897
GO:GO:0014061 GO:GO:0007271 GO:GO:0042391 GO:GO:0004889
GO:GO:0042113 GO:GO:0032720 GO:GO:0008306 GO:GO:0048149
GO:GO:0060112 GO:GO:0032691 GO:GO:0032715 GO:GO:0001988
GO:GO:0032225 GO:GO:0032094 GO:GO:0030317 GO:GO:0042110
IPI:IPI00324645 ProteinModelPortal:F1M7L0
Ensembl:ENSRNOT00000055925 ArrayExpress:F1M7L0 Uniprot:F1M7L0
Length = 531
Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
Identities = 143/369 (38%), Positives = 210/369 (56%)
Query: 30 QGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQ 89
QG + +RLY +L+ NYN L RPV N+S LTV L L Q+++V+ KNQ++TTN+W+
Sbjct: 22 QGEFQ-RRLYKELVKNYNPLERPVANDSQPLTVYFSLSLLQIMDVDEKNQVLTTNIWLQM 80
Query: 90 NLKNQIMTTNVWV-----NQEWEDYKLKWSPEE--YGGVDTLHVPSE--HIWLPDIVLYN 140
+ + + N+ N + D ++ W P+ Y LH + ++ L +
Sbjct: 81 SWTDHYLQWNMSEYPGVKNVRFPDGQI-WKPDILLYNSGCQLHFDQDLQNMLLREACAQA 139
Query: 141 NADGNYEVTIMTKA------ILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGS 194
D +T A +++ G + PP I+KS C IDV +FPFDVQ C +KFGS
Sbjct: 140 GEDLRVPKDDLTNAEGHTSSVINQIGHREYFPPCIFKSSCYIDVRWFPFDVQQCKLKFGS 199
Query: 195 WTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPD 254
W+Y G+++DL+ +Q D + Y + EWD+M +P RNEKFY CC+EPYPD
Sbjct: 200 WSYGGWSLDLQ--MQEAD---------ISSYIPNGEWDLMGIPGKRNEKFYECCKEPYPD 248
Query: 255 IIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXX 314
+ + +T+RR+TL+Y +NL+IPCV IS L++LVF LP+DSGEK+SL
Sbjct: 249 VTYTVTMRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLV 308
Query: 315 AEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVL 374
AEI+P TS +VPL+ +Y TMI+V LSVVVT+ VL + P M W + +
Sbjct: 309 AEIMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLRYHHHDPDGGKMPKWTRIILLNWC 368
Query: 375 PKILFIQRP 383
L ++RP
Sbjct: 369 AWFLRMKRP 377
>WB|WBGene00000049 [details] [associations]
symbol:acr-10 species:6239 "Caenorhabditis elegans"
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0040011
"locomotion" evidence=IMP] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0040011 GO:GO:0004889
HOGENOM:HOG000006756 GeneTree:ENSGT00630000089708 EMBL:FO080560
ProteinModelPortal:Q21645 SMR:Q21645 PaxDb:Q21645
EnsemblMetazoa:R02E12.8 KEGG:cel:CELE_R02E12.8 UCSC:R02E12.8
CTD:191598 WormBase:R02E12.8 eggNOG:NOG300001 InParanoid:Q21645
OMA:NSASEDF NextBio:949620 Uniprot:Q21645
Length = 557
Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
Identities = 134/368 (36%), Positives = 208/368 (56%)
Query: 21 FLVFSVIIAQGN-DEAK-RLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKN 78
F + S+II + +A+ +LY D+L Y +L RPV + L V M + L Q++ NL
Sbjct: 11 FFILSLIIIESECSKAENKLYRDILQGYLKLARPVRYPRNVLKVHMKVFLQQIL--NLDG 68
Query: 79 QIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPS--EHIWLPDI 136
Q NQI+ N W+ W DY+L+W P +Y + ++ IW PDI
Sbjct: 69 Q-------------NQIIEVNAWLKYVWMDYRLQWDPLQYDNITSIRFAGGENQIWRPDI 115
Query: 137 VLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWT 196
+LYN+A +++ + + +++ G+V W PP I+++ C++D+ YFPFD Q C +KFGSWT
Sbjct: 116 LLYNSASEDFDSSFKSNEVVYNTGEVNWIPPGIFRASCKMDITYFPFDDQVCYLKFGSWT 175
Query: 197 YDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDII 256
Y G +DL I + DS+ + IDL Y S EW + K PAV++ K+ SCC+EPY +
Sbjct: 176 YHGLALDLSIIAEEDDSE---LSIDLSTYTPSGEWHLTKAPAVKDVKYNSCCKEPYSTVT 232
Query: 257 FNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPS-DSGEKVSLCXXXXXXXXXXXXXXA 315
F + LRR+TLFY N+I+P + IS ++++ F LP+ D EK+ +
Sbjct: 233 FYMFLRRRTLFYLFNIILPSLLISIMTLMGFCLPAHDMSEKIGYQTTILLSICFFVTIVS 292
Query: 316 EIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLP 375
E+ PPTS +VPLLG + ++ ++S TI VLN +R M P +KVF+ +P
Sbjct: 293 EMTPPTSESVPLLGMFFSSLTLISSVSTAFTITVLNFRYRQVQNIHMHPIFYKVFLIWIP 352
Query: 376 KILFIQRP 383
+L ++RP
Sbjct: 353 WLLLMKRP 360
>UNIPROTKB|F1MF20 [details] [associations]
symbol:CHRNA10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050910 "detection of mechanical stimulus involved in
sensory perception of sound" evidence=IEA] [GO:0042472 "inner ear
morphogenesis" evidence=IEA] [GO:0007271 "synaptic transmission,
cholinergic" evidence=IEA] [GO:0007204 "elevation of cytosolic
calcium ion concentration" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007271 GO:GO:0042472 GO:GO:0004889
OMA:DGAVRWD GO:GO:0050910 GO:GO:0007204
GeneTree:ENSGT00630000089708 EMBL:DAAA02040992 IPI:IPI00706078
Ensembl:ENSBTAT00000061577 Uniprot:F1MF20
Length = 459
Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
Identities = 121/312 (38%), Positives = 183/312 (58%)
Query: 70 QLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSE 129
Q + V L+ +T + ++ + +NQ++T +W+ QEW D L+W P+ YGG+D + +PS
Sbjct: 63 QALNVTLE---VTLSQIIDMDERNQVLTLYLWIRQEWTDAYLRWDPDTYGGLDAIRIPSS 119
Query: 130 HIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCV 189
+W PDIVLYN AD + T +L +DG V W+ PAI +S C +DV FPFD Q C
Sbjct: 120 -LWRPDIVLYNKADAQAPASASTNVVLRHDGAVRWDAPAITRSSCRVDVSAFPFDAQRCG 178
Query: 190 MKFGSWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCE 249
+ FGSWT+ G+ +D++ +G + L D+ +VEW ++ +PA R Y CC
Sbjct: 179 LTFGSWTHGGHQLDVRP--RGAAAS-------LADFVENVEWRVLGMPARRRVLTYGCCS 229
Query: 250 EPYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXX 309
EPYPD+ F + LRR+ Y NL++PCV IS L+ L F+LP+DSGEKVSL
Sbjct: 230 EPYPDVTFTLLLRRRAAAYVCNLLLPCVLISLLAPLAFHLPADSGEKVSLGVTVLLALTV 289
Query: 310 XXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKV 369
AE +PP +VPL+GKY + TM +VT S +TI ++N+++ P + W +
Sbjct: 290 FQLILAESMPPAE-SVPLIGKYYMATMTMVTFSTALTILIMNLHYCGPSARPVPAWARAL 348
Query: 370 FIEVLPKILFIQ 381
+ L + L ++
Sbjct: 349 LLGRLARGLCVR 360
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 68/171 (39%), Positives = 102/171 (59%)
Query: 35 AKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQ 94
A +L+ DL +NY +RPV + L V + + LSQ+I+++ +NQ++T +W+ Q
Sbjct: 40 AHKLFRDLFANYTSALRPVADTDQALNVTLEVTLSQIIDMDERNQVLTLYLWIRQ----- 94
Query: 95 IMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKA 154
EW D L+W P+ YGG+D + +PS +W PDIVLYN AD + T
Sbjct: 95 ----------EWTDAYLRWDPDTYGGLDAIRIPSS-LWRPDIVLYNKADAQAPASASTNV 143
Query: 155 ILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLK 205
+L +DG V W+ PAI +S C +DV FPFD Q C + FGSWT+ G+ +D++
Sbjct: 144 VLRHDGAVRWDAPAITRSSCRVDVSAFPFDAQRCGLTFGSWTHGGHQLDVR 194
Score = 129 (50.5 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 519 QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
QEW D L+W P+ YGG+D + +PS +W PDIVLYN
Sbjct: 94 QEWTDAYLRWDPDTYGGLDAIRIPSS-LWRPDIVLYN 129
>UNIPROTKB|P07510 [details] [associations]
symbol:CHRNG "Acetylcholine receptor subunit gamma"
species:9606 "Homo sapiens" [GO:0030054 "cell junction"
evidence=IEA] [GO:0004889 "acetylcholine-activated cation-selective
channel activity" evidence=IEA] [GO:0005892 "acetylcholine-gated
channel complex" evidence=IEA] [GO:0042391 "regulation of membrane
potential" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0006810 "transport" evidence=TAS] [GO:0006936
"muscle contraction" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0015267 "channel activity"
evidence=TAS] [GO:0015464 "acetylcholine receptor activity"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS]
Reactome:REACT_13685 InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0042391 HOVERGEN:HBG003756 GO:GO:0004889
GO:GO:0005892 GO:GO:0015464 MIM:253290 Orphanet:33108
HOGENOM:HOG000006757 GO:GO:0015267 GO:GO:0006936 eggNOG:NOG291810
EMBL:AC092165 CTD:1146 KO:K04818 OMA:VFYLLIQ OrthoDB:EOG4R7V9N
EMBL:X01715 EMBL:X01716 EMBL:X01717 EMBL:X01718 EMBL:X01719
EMBL:X01720 EMBL:X01721 EMBL:X04759 EMBL:AK125362 IPI:IPI00746413
PIR:A23261 RefSeq:NP_005190.4 UniGene:Hs.248101
ProteinModelPortal:P07510 SMR:P07510 STRING:P07510
PhosphoSite:P07510 DMDM:126302510 PRIDE:P07510
Ensembl:ENST00000389494 Ensembl:ENST00000541596 GeneID:1146
KEGG:hsa:1146 UCSC:uc002vsx.1 GeneCards:GC02P233404 HGNC:HGNC:1967
MIM:100730 MIM:265000 neXtProt:NX_P07510 Orphanet:79449
PharmGKB:PA26499 InParanoid:P07510 BindingDB:P07510
ChEMBL:CHEMBL2613 GenomeRNAi:1146 NextBio:4768 Bgee:P07510
CleanEx:HS_CHRNG Genevestigator:P07510 GermOnline:ENSG00000196811
Uniprot:P07510
Length = 517
Score = 627 (225.8 bits), Expect = 2.7e-61, P = 2.7e-61
Identities = 139/372 (37%), Positives = 210/372 (56%)
Query: 17 PSLTFLVFSVII-AQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVN 75
P L L+ +V + AQG ++ +RL DL+ NY+ +RP +SD + V + L L+ LI +N
Sbjct: 7 PLLLLLLLAVCLGAQGRNQEERLLADLMQNYDPNLRPAERDSDVVNVSLKLTLTNLISLN 66
Query: 76 LKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPD 135
+ + +TTNVW+ +W DY+L+W P +Y G+ L VPS +W PD
Sbjct: 67 EREEALTTNVWIEM---------------QWCDYRLRWDPRDYEGLWVLRVPSTMVWRPD 111
Query: 136 IVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSW 195
IVL NN DG +EV + ++ DG + W PPAI++S C I V YFPFD Q C + F S
Sbjct: 112 IVLENNVDGVFEVALYCNVLVSPDGCIYWLPPAIFRSACSISVTYFPFDWQNCSLIFQSQ 171
Query: 196 TYDGYTVDLKHILQGPDSDKID-IGIDLQDYYLSVEWDIMKVPA-VRNEKFYSCCEEPYP 253
TY +DL+ L D I+ I ID + + + EW I PA + + E +
Sbjct: 172 TYSTNEIDLQ--LSQEDGQTIEWIFIDPEAFTENGEWAIQHRPAKMLLDPAAPAQEAGHQ 229
Query: 254 DIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSG-EKVSLCXXXXXXXXXXXX 312
++F + ++RK LFY +N+I PCV IS +++L+ +LP+ +G +K ++
Sbjct: 230 KVVFYLLIQRKPLFYVINIIAPCVLISSVAILIHFLPAKAGGQKCTVAINVLLAQTVFLF 289
Query: 313 XXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIE 372
A+ +P TS VPL+ KYL F +++ L VV + VLNV+ RSP TH M V KVF+
Sbjct: 290 LVAKKVPETSQAVPLISKYLTFLLVVTILIVVNAVVVLNVSLRSPHTHSMARGVRKVFLR 349
Query: 373 VLPKILFIQ-RP 383
+LP++L + RP
Sbjct: 350 LLPQLLRMHVRP 361
>RGD|2354 [details] [associations]
symbol:Chrng "cholinergic receptor, nicotinic, gamma (muscle)"
species:10116 "Rattus norvegicus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA;ISO;IDA] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0005892 "acetylcholine-gated channel complex" evidence=IEA;ISO]
[GO:0006812 "cation transport" evidence=ISO] [GO:0015276
"ligand-gated ion channel activity" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034220 "ion transmembrane transport" evidence=ISO]
[GO:0042391 "regulation of membrane potential" evidence=IEA;ISO]
[GO:0045211 "postsynaptic membrane" evidence=IEA;ISO]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 RGD:2354 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0042391 HOVERGEN:HBG003756 GO:GO:0004889
GO:GO:0005892 HOGENOM:HOG000006757 eggNOG:NOG291810 CTD:1146
KO:K04818 OrthoDB:EOG4R7V9N EMBL:X74834 EMBL:X06364 IPI:IPI00196312
PIR:S13874 RefSeq:NP_062018.1 UniGene:Rn.44634
ProteinModelPortal:P18916 SMR:P18916 STRING:P18916 PRIDE:P18916
GeneID:25753 KEGG:rno:25753 UCSC:RGD:2354 InParanoid:P18916
ChEMBL:CHEMBL3767 NextBio:607951 ArrayExpress:P18916
Genevestigator:P18916 GermOnline:ENSRNOG00000019602 Uniprot:P18916
Length = 519
Score = 625 (225.1 bits), Expect = 4.3e-61, P = 4.3e-61
Identities = 136/366 (37%), Positives = 209/366 (57%)
Query: 17 PSLTFLVFSVII-AQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVN 75
P L L+ + + AQ ++ +RL DL+ NY+ +RP +SD + V + L L+ LI +N
Sbjct: 7 PQLLLLLLATCLGAQSRNQEERLLADLMRNYDPHLRPAERDSDVVNVSLKLTLTNLISLN 66
Query: 76 LKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPD 135
+ + +TTNVW+ +W DY+L+W P++Y G+ L VPS +W PD
Sbjct: 67 EREEALTTNVWIEM---------------QWCDYRLRWDPKDYEGLWILRVPSTMVWQPD 111
Query: 136 IVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSW 195
IVL NN DG +EV + ++ DG + W PPAI++S C I V YFPFD Q C + F S
Sbjct: 112 IVLGNNVDGVFEVALYCNVLVSPDGCIYWLPPAIFRSSCSISVTYFPFDWQNCSLVFQSQ 171
Query: 196 TYDGYTVDLKHILQGPDSDKID-IGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEP-YP 253
TY ++L+ L D I+ I ID + + + EW I PA + EE +
Sbjct: 172 TYSTSEINLQ--LSQEDGQAIEWIFIDPEAFTENGEWAIRHRPAKMLLDPVTPAEEAGHQ 229
Query: 254 DIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSG-EKVSLCXXXXXXXXXXXX 312
++F + ++RK LFY +N+I+PCV IS +++L+++LP+ +G +K ++
Sbjct: 230 KVVFYLLIQRKPLFYVINIIVPCVLISSVAILIYFLPAKAGGQKCTVATNVLLAQTVFLF 289
Query: 313 XXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIE 372
A+ +P TS VPL+ KYL F M++ L VV ++ VLNV+ RSP TH M V KVF+
Sbjct: 290 LVAKKVPETSQAVPLISKYLTFLMVVTILIVVNSVVVLNVSLRSPHTHSMARGVRKVFLR 349
Query: 373 VLPKIL 378
+LP++L
Sbjct: 350 LLPQLL 355
>UNIPROTKB|P18916 [details] [associations]
symbol:Chrng "Acetylcholine receptor subunit gamma"
species:10116 "Rattus norvegicus" [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 RGD:2354 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0042391 HOVERGEN:HBG003756 GO:GO:0004889
GO:GO:0005892 HOGENOM:HOG000006757 eggNOG:NOG291810 CTD:1146
KO:K04818 OrthoDB:EOG4R7V9N EMBL:X74834 EMBL:X06364 IPI:IPI00196312
PIR:S13874 RefSeq:NP_062018.1 UniGene:Rn.44634
ProteinModelPortal:P18916 SMR:P18916 STRING:P18916 PRIDE:P18916
GeneID:25753 KEGG:rno:25753 UCSC:RGD:2354 InParanoid:P18916
ChEMBL:CHEMBL3767 NextBio:607951 ArrayExpress:P18916
Genevestigator:P18916 GermOnline:ENSRNOG00000019602 Uniprot:P18916
Length = 519
Score = 625 (225.1 bits), Expect = 4.3e-61, P = 4.3e-61
Identities = 136/366 (37%), Positives = 209/366 (57%)
Query: 17 PSLTFLVFSVII-AQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVN 75
P L L+ + + AQ ++ +RL DL+ NY+ +RP +SD + V + L L+ LI +N
Sbjct: 7 PQLLLLLLATCLGAQSRNQEERLLADLMRNYDPHLRPAERDSDVVNVSLKLTLTNLISLN 66
Query: 76 LKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPD 135
+ + +TTNVW+ +W DY+L+W P++Y G+ L VPS +W PD
Sbjct: 67 EREEALTTNVWIEM---------------QWCDYRLRWDPKDYEGLWILRVPSTMVWQPD 111
Query: 136 IVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSW 195
IVL NN DG +EV + ++ DG + W PPAI++S C I V YFPFD Q C + F S
Sbjct: 112 IVLGNNVDGVFEVALYCNVLVSPDGCIYWLPPAIFRSSCSISVTYFPFDWQNCSLVFQSQ 171
Query: 196 TYDGYTVDLKHILQGPDSDKID-IGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEP-YP 253
TY ++L+ L D I+ I ID + + + EW I PA + EE +
Sbjct: 172 TYSTSEINLQ--LSQEDGQAIEWIFIDPEAFTENGEWAIRHRPAKMLLDPVTPAEEAGHQ 229
Query: 254 DIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSG-EKVSLCXXXXXXXXXXXX 312
++F + ++RK LFY +N+I+PCV IS +++L+++LP+ +G +K ++
Sbjct: 230 KVVFYLLIQRKPLFYVINIIVPCVLISSVAILIYFLPAKAGGQKCTVATNVLLAQTVFLF 289
Query: 313 XXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIE 372
A+ +P TS VPL+ KYL F M++ L VV ++ VLNV+ RSP TH M V KVF+
Sbjct: 290 LVAKKVPETSQAVPLISKYLTFLMVVTILIVVNSVVVLNVSLRSPHTHSMARGVRKVFLR 349
Query: 373 VLPKIL 378
+LP++L
Sbjct: 350 LLPQLL 355
>MGI|MGI:87894 [details] [associations]
symbol:Chrne "cholinergic receptor, nicotinic, epsilon
polypeptide" species:10090 "Mus musculus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IGI] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0042391 "regulation of membrane potential"
evidence=IGI] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IDA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 MGI:MGI:87894 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0042391 HOVERGEN:HBG003756 GO:GO:0004889
GO:GO:0005892 HOGENOM:HOG000006757 eggNOG:NOG291810 CTD:1145
KO:K04817 OrthoDB:EOG4DZ1V6 EMBL:J04698 EMBL:X55718 IPI:IPI00122860
PIR:S13592 RefSeq:NP_033733.1 UniGene:Mm.4980
ProteinModelPortal:P20782 SMR:P20782 STRING:P20782 PaxDb:P20782
PRIDE:P20782 DNASU:11448 Ensembl:ENSMUST00000102556 GeneID:11448
KEGG:mmu:11448 NextBio:278760 Bgee:P20782 Genevestigator:P20782
GermOnline:ENSMUSG00000014609 Uniprot:P20782
Length = 493
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 132/353 (37%), Positives = 202/353 (57%)
Query: 29 AQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVN 88
+QG +E LY L NY+ RPV D +T+ + + L+ LI +N K + +TT+VW+
Sbjct: 18 SQGKNEELSLYHHLFDNYDPECRPVRRPEDTVTITLKVTLTNLISLNEKEETLTTSVWIG 77
Query: 89 QNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEV 148
+W DY+L +S +++ GV L VPSEH+WLP+IVL NN DG + V
Sbjct: 78 I---------------DWHDYRLNYSKDDFAGVGILRVPSEHVWLPEIVLENNIDGQFGV 122
Query: 149 TIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHIL 208
+ +++ G V W PPAIY+S C ++V YFPFD Q C + F S TY+ V+ +
Sbjct: 123 AYDSNVLVYEGGYVSWLPPAIYRSTCAVEVTYFPFDWQNCSLIFRSQTYNAEEVEFIFAV 182
Query: 209 QGPDSDKID-IGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEP-YPDIIFNITLRRKTL 266
D + I+ I ID + + EW I P + E P D+I+ + +RRK L
Sbjct: 183 DD-DGNTINKIDIDTAAFTENGEWAIDYCPGMIRRYEGGSTEGPGETDVIYTLIIRRKPL 241
Query: 267 FYTVNLIIPCVGISFLSVLVFYLPSDSG-EKVSLCXXXXXXXXXXXXXXAEIIPPTSLTV 325
FY +N+I+PCV IS L +L ++LP+ +G +K ++ A+ IP TSL+V
Sbjct: 242 FYVINIIVPCVLISGLVLLAYFLPAQAGGQKCTVSINVLLAQTVFLFLIAQKIPETSLSV 301
Query: 326 PLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKIL 378
PLLG+YL+F M++ TL V+ + VLNV+ R+P TH P + ++ +E+LP++L
Sbjct: 302 PLLGRYLIFVMVVATLIVMNCVIVLNVSLRTPTTHATSPRLRQILLELLPRLL 354
Score = 127 (49.8 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 20/36 (55%), Positives = 28/36 (77%)
Query: 520 EWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+W DY+L +S +++ GV L VPSEH+WLP+IVL N
Sbjct: 79 DWHDYRLNYSKDDFAGVGILRVPSEHVWLPEIVLEN 114
>MGI|MGI:87895 [details] [associations]
symbol:Chrng "cholinergic receptor, nicotinic, gamma
polypeptide" species:10090 "Mus musculus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISO;IGI] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005892
"acetylcholine-gated channel complex" evidence=IDA] [GO:0006810
"transport" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0006812 "cation transport" evidence=IGI] [GO:0015276
"ligand-gated ion channel activity" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034220
"ion transmembrane transport" evidence=IGI] [GO:0042391 "regulation
of membrane potential" evidence=IGI] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IDA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 MGI:MGI:87895
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0042391 HOVERGEN:HBG003756
GO:GO:0004889 GO:GO:0005892 HOGENOM:HOG000006757 eggNOG:NOG291810
OrthoDB:EOG4R7V9N EMBL:X03818 EMBL:X03819 EMBL:M30514 EMBL:M27455
EMBL:M22381 EMBL:S77465 IPI:IPI00118671 IPI:IPI00224935 PIR:I56566
UniGene:Mm.2810 ProteinModelPortal:P04760 SMR:P04760 STRING:P04760
PhosphoSite:P04760 PRIDE:P04760 UCSC:uc007bwh.1 InParanoid:P04760
BindingDB:P04760 ChEMBL:CHEMBL4579 Genevestigator:P04760
GermOnline:ENSMUSG00000026253 Uniprot:P04760
Length = 519
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 138/372 (37%), Positives = 212/372 (56%)
Query: 17 PSLTFLVFSVII-AQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVN 75
P L L+ +V + AQ ++ +RL DL+ NY+ +RP +SD + V + L L+ LI +N
Sbjct: 7 PHLLLLLLAVCLGAQSRNQEERLLADLMRNYDPHLRPAERDSDVVNVSLKLTLTNLISLN 66
Query: 76 LKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPD 135
+ + +TTNVW+ +W DY+L+W P++Y G+ L VPS +W PD
Sbjct: 67 EREEALTTNVWIEM---------------QWCDYRLRWDPKDYEGLWILRVPSTMVWRPD 111
Query: 136 IVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSW 195
IVL NN DG +EV + ++ DG + W PPAI++S C I V YFPFD Q C + F S
Sbjct: 112 IVLENNVDGVFEVALYCNVLVSPDGCIYWLPPAIFRSSCSISVTYFPFDWQNCSLIFQSQ 171
Query: 196 TYDGYTVDLKHILQGPDSDKID-IGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEP-YP 253
TY ++L+ L D I+ I ID + + + EW I PA + EE +
Sbjct: 172 TYSTSEINLQ--LSQEDGQAIEWIFIDPEAFTENGEWAIRHRPAKMLLDSVAPAEEAGHQ 229
Query: 254 DIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSG-EKVSLCXXXXXXXXXXXX 312
++F + ++RK LFY +N+I PCV IS +++L+++LP+ +G +K ++
Sbjct: 230 KVVFYLLIQRKPLFYVINIIAPCVLISSVAILIYFLPAKAGGQKCTVATNVLLAQTVFLF 289
Query: 313 XXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIE 372
A+ +P TS VPL+ KYL F M++ L VV ++ VLNV+ RSP TH M V K+F+
Sbjct: 290 LVAKKVPETSQAVPLISKYLTFLMVVTILIVVNSVVVLNVSLRSPHTHSMARGVRKLFLR 349
Query: 373 VLPKILFIQ-RP 383
+LP++L + RP
Sbjct: 350 LLPQLLRMHVRP 361
>UNIPROTKB|F1RFW1 [details] [associations]
symbol:CHRNE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0042391 GO:GO:0004889
GeneTree:ENSGT00620000087691 KO:K04817 OMA:AIYRSTC EMBL:FP015831
RefSeq:XP_003131968.1 UniGene:Ssc.78859 Ensembl:ENSSSCT00000019489
GeneID:100515236 KEGG:ssc:100515236 Uniprot:F1RFW1
Length = 495
Score = 622 (224.0 bits), Expect = 9.0e-61, P = 9.0e-61
Identities = 135/357 (37%), Positives = 200/357 (56%)
Query: 31 GNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQN 90
G +E RLY L NY+ RPV D +TV + + L+ LI +N K + +TT+VW+
Sbjct: 22 GKNEELRLYHHLFDNYDPGRRPVREPKDTVTVSLKVTLTNLISLNEKEETLTTSVWIGI- 80
Query: 91 LKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTI 150
+W DY+L +S ++GG++TL VPSE +WLP+IVL NN DG + V
Sbjct: 81 --------------DWSDYRLNYSKADFGGIETLRVPSELVWLPEIVLENNIDGQFGVAY 126
Query: 151 MTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQ- 209
++ G V W PPAIY+S C ++V YFPFD Q C + F S TY V+ +
Sbjct: 127 EANVLVSEGGYVSWLPPAIYRSTCAVEVTYFPFDWQNCSLVFRSQTYSAEEVEFVFAVDD 186
Query: 210 -GPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYP-DIIFNITLRRKTLF 267
G K++I D + Y + EW I P V S ++P D+ + + +RRK LF
Sbjct: 187 LGETISKLEI--DTEAYTENGEWAIDFCPGVIRRHDGSSPDDPGDSDVTYTLIIRRKPLF 244
Query: 268 YTVNLIIPCVGISFLSVLVFYLPSDSG-EKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVP 326
Y +N+I+PCV IS L +L ++LP+ +G +K ++ A+ IP TSL+VP
Sbjct: 245 YVINIIVPCVLISGLVLLAYFLPAQAGGQKCTVSINVLLAQTVFLFLIAQKIPETSLSVP 304
Query: 327 LLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
LLG+YL+F M++ TL V+ + VLNV+ R+P TH + P + V +E+LP +L P
Sbjct: 305 LLGRYLIFVMVVATLIVMNCVIVLNVSLRTPTTHTVSPRLRHVLLELLPPLLGFGEP 361
Score = 127 (49.8 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 20/36 (55%), Positives = 29/36 (80%)
Query: 520 EWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+W DY+L +S ++GG++TL VPSE +WLP+IVL N
Sbjct: 81 DWSDYRLNYSKADFGGIETLRVPSELVWLPEIVLEN 116
>UNIPROTKB|I3LUK2 [details] [associations]
symbol:I3LUK2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0004889 GeneTree:ENSGT00630000089708
EMBL:CU469346 Ensembl:ENSSSCT00000025075 Uniprot:I3LUK2
Length = 460
Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
Identities = 132/322 (40%), Positives = 193/322 (59%)
Query: 70 QLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEW-EDYKLKWSPEEYGGVDTLHVPS 128
Q +EV + Q++ +N + NQI+TTNV + Q W L W +G + ++ S
Sbjct: 47 QAVEVTVGLQLIQL---INVDEVNQIVTTNVRLKQPWCPPNVLHWDLRFFGRLYSIVCES 103
Query: 129 EHIW-LPDIVLYN-NADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQ 186
+ IVL+ +ADG++ + TK +L Y G + W PPAI+KS+CEI V +FPFD Q
Sbjct: 104 VSLLHRGSIVLFFCSADGDFAIVKFTKVLLDYTGHITWTPPAIFKSYCEIIVTHFPFDEQ 163
Query: 187 TCVMKFGSWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYS 246
C MK G+WTYDG V + P+SD+ D L ++ S EW I + ++ Y+
Sbjct: 164 NCSMKLGTWTYDGSVVAIN-----PESDQPD----LSNFMESGEWVIKEARGWKHRVLYA 214
Query: 247 CCEE-PYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXX 305
CC PY DI ++ ++R L++ VN+IIPC+ SFL+ LVFYLP+DSGEK++L
Sbjct: 215 CCPSTPYLDITYHFVMQRLPLYFIVNVIIPCLLFSFLTGLVFYLPTDSGEKMTLSISVLL 274
Query: 306 XXXXXXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPW 365
E+IP TS VPL+GKY+LFTM+ V S+++T+ V+N + RSP THVM W
Sbjct: 275 SLTVFLLVIVELIPSTSSAVPLIGKYMLFTMVFVIASIIITVIVINTHHRSPSTHVMPEW 334
Query: 366 VHKVFIEVLPKILF---IQRPA 384
V KVFI+ +P I+F ++RP+
Sbjct: 335 VRKVFIDTIPNIMFFSTMKRPS 356
Score = 298 (110.0 bits), Expect = 4.1e-24, P = 4.1e-24
Identities = 75/200 (37%), Positives = 107/200 (53%)
Query: 17 PSLTFLVF--SVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEV 74
P+L L+ S + G++ RL L +YN ++RPV ++ + V +GL+L QLI V
Sbjct: 4 PALLLLLSLCSAGLVLGSEHETRLVAKLFEDYNSVVRPVEDHRQAVEVTVGLQLIQLINV 63
Query: 75 NLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIW-L 133
+ NQI+TTNV LK NV L W +G + ++ S +
Sbjct: 64 DEVNQIVTTNV----RLKQPWCPPNV----------LHWDLRFFGRLYSIVCESVSLLHR 109
Query: 134 PDIVLYN-NADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKF 192
IVL+ +ADG++ + TK +L Y G + W PPAI+KS+CEI V +FPFD Q C MK
Sbjct: 110 GSIVLFFCSADGDFAIVKFTKVLLDYTGHITWTPPAIFKSYCEIIVTHFPFDEQNCSMKL 169
Query: 193 GSWTYDGYTVDLKHILQGPD 212
G+WTYDG V + PD
Sbjct: 170 GTWTYDGSVVAINPESDQPD 189
>UNIPROTKB|P02715 [details] [associations]
symbol:CHRNE "Acetylcholine receptor subunit epsilon"
species:9913 "Bos taurus" [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0042391 HOVERGEN:HBG003756
GO:GO:0004889 HOGENOM:HOG000006757 GeneTree:ENSGT00620000087691
eggNOG:NOG291810 EMBL:X02597 EMBL:AF457659 EMBL:AF457656
EMBL:AF457657 EMBL:AF457658 IPI:IPI00717076 PIR:A03174
RefSeq:NP_776697.1 UniGene:Bt.4231 ProteinModelPortal:P02715
SMR:P02715 PRIDE:P02715 Ensembl:ENSBTAT00000045415 GeneID:281688
KEGG:bta:281688 CTD:1145 KO:K04817 OMA:AIYRSTC NextBio:20805615
ArrayExpress:P02715 Uniprot:P02715
Length = 491
Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
Identities = 135/353 (38%), Positives = 202/353 (57%)
Query: 30 QGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQ 89
+G +E RLY L Y+ RPV D +T+ + + L+ LI +N K + +TT+VW+
Sbjct: 19 EGKNEELRLYHYLFDTYDPGRRPVQEPEDTVTISLKVTLTNLISLNEKEETLTTSVWIGI 78
Query: 90 NLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVT 149
+W+DY+L +S ++GGV+TL VPSE +WLP+IVL NN DG + V
Sbjct: 79 ---------------DWQDYRLNYSKGDFGGVETLRVPSELVWLPEIVLENNIDGQFGVA 123
Query: 150 IMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHIL- 208
++ G + W PPAIY+S C ++V YFPFD Q C + F S TY+ V+ +
Sbjct: 124 YEANVLVSEGGYLSWLPPAIYRSTCAVEVTYFPFDWQNCSLVFRSQTYNAEEVEFVFAVD 183
Query: 209 -QGPDSDKIDIGIDLQDYYLSVEWDIMKVPAV-RNEKFYSCCEEPYPDIIFNITLRRKTL 266
+G KIDI D + Y + EW I P V R S D+I+++ +RRK L
Sbjct: 184 DEGKTISKIDI--DTEAYTENGEWAIDFCPGVIRRHDGDSAGGPGETDVIYSLIIRRKPL 241
Query: 267 FYTVNLIIPCVGISFLSVLVFYLPSDSG-EKVSLCXXXXXXXXXXXXXXAEIIPPTSLTV 325
FY +N+I+PCV IS L +L ++LP+ +G +K ++ A+ P TSL+V
Sbjct: 242 FYVINIIVPCVLISGLVLLAYFLPAQAGGQKCTVSINVLLAQTVFLFLIAQKTPETSLSV 301
Query: 326 PLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKIL 378
PLLG+YL+F M++ TL V+ + VLNV+ R+P TH M P + V +E+LP++L
Sbjct: 302 PLLGRYLIFVMVVATLIVMNCVIVLNVSLRTPTTHAMSPRLRYVLLELLPQLL 354
Score = 129 (50.5 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 21/36 (58%), Positives = 30/36 (83%)
Query: 520 EWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+W+DY+L +S ++GGV+TL VPSE +WLP+IVL N
Sbjct: 79 DWQDYRLNYSKGDFGGVETLRVPSELVWLPEIVLEN 114
>UNIPROTKB|F1SMT2 [details] [associations]
symbol:CHRNG "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
[GO:0005892 "acetylcholine-gated channel complex" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0042391 GO:GO:0004889 GO:GO:0005892
GeneTree:ENSGT00620000087691 KO:K04818 OMA:VFYLLIQ EMBL:CU855838
RefSeq:XP_003133779.1 UniGene:Ssc.60118 Ensembl:ENSSSCT00000017737
GeneID:100522221 KEGG:ssc:100522221 Uniprot:F1SMT2
Length = 519
Score = 620 (223.3 bits), Expect = 1.5e-60, P = 1.5e-60
Identities = 136/359 (37%), Positives = 205/359 (57%)
Query: 29 AQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVN 88
AQG ++ +RL DL+ NYN +RP ++SD + V + L L+ LI +N + + +TTNVW+
Sbjct: 20 AQGRNQEERLLGDLMHNYNPHLRPAEHDSDVVNVSLKLTLTNLISLNEREEALTTNVWIE 79
Query: 89 QNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEV 148
+W DY+L+W P +Y G+ L VPS +W PD+VL NN DG +EV
Sbjct: 80 M---------------QWCDYRLRWDPSDYEGLWILRVPSAMVWRPDVVLENNVDGVFEV 124
Query: 149 TIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHIL 208
+ ++ DG V W PPAI++S C + V YFPFD Q C + F S TY ++L+ L
Sbjct: 125 ALYCNVLVSPDGCVYWLPPAIFRSSCPVSVTYFPFDWQNCSLIFQSQTYSTNEINLQ--L 182
Query: 209 QGPDSDKID-IGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEP-YPDIIFNITLRRKTL 266
D I+ I ID + + + EW I PA + EE + ++F + ++RK L
Sbjct: 183 SQEDGQTIEWIFIDPEAFTENGEWAIRHRPAKMLLDEAAPAEEAGHQKVVFYLLIQRKPL 242
Query: 267 FYTVNLIIPCVGISFLSVLVFYLPSDSG-EKVSLCXXXXXXXXXXXXXXAEIIPPTSLTV 325
FY +N+I PCV IS ++VL+++LP+ +G +K ++ A+ +P TS V
Sbjct: 243 FYVINIIAPCVLISSVAVLIYFLPAKAGGQKCTVAINVLLAQTVFLFLVAKKVPETSQAV 302
Query: 326 PLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQ-RP 383
PL+ KYL F +++ L VV + VLNV+ RSP TH M V KVF+ +LP++L + RP
Sbjct: 303 PLISKYLTFLLVVTILIVVNAVVVLNVSLRSPHTHSMAGGVRKVFLRLLPQLLRMHVRP 361
>UNIPROTKB|P13536 [details] [associations]
symbol:CHRNG "Acetylcholine receptor subunit gamma"
species:9913 "Bos taurus" [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0042391 "regulation of membrane potential"
evidence=IEA] [GO:0005892 "acetylcholine-gated channel complex"
evidence=IEA] [GO:0004889 "acetylcholine-activated cation-selective
channel activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0042391
HOVERGEN:HBG003756 GO:GO:0004889 GO:GO:0005892
GeneTree:ENSGT00620000087691 EMBL:M28307 IPI:IPI00699532 PIR:I45847
RefSeq:NP_776698.1 UniGene:Bt.4960 ProteinModelPortal:P13536
SMR:P13536 PRIDE:P13536 Ensembl:ENSBTAT00000053164 GeneID:281689
KEGG:bta:281689 CTD:1146 KO:K04818 OMA:VFYLLIQ NextBio:20805616
ArrayExpress:P13536 Uniprot:P13536
Length = 519
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 134/359 (37%), Positives = 205/359 (57%)
Query: 29 AQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVN 88
A+G ++ +RL DL+ YN +RP ++SD + V + L L+ LI +N + + +TTNVW+
Sbjct: 20 AKGRNQEERLLGDLMQGYNPHLRPAEHDSDVVNVSLKLTLTNLISLNEREEALTTNVWIE 79
Query: 89 QNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEV 148
+W DY+L+W P +YGG+ L VPS +W PDIVL NN DG +EV
Sbjct: 80 M---------------QWCDYRLRWDPRDYGGLWVLRVPSTMVWRPDIVLENNVDGVFEV 124
Query: 149 TIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHIL 208
+ ++ DG V W PPAI++S C + V +FPFD Q C + F S TY ++L+ L
Sbjct: 125 ALYCNVLVSPDGCVYWLPPAIFRSSCPVSVTFFPFDWQNCSLIFQSQTYSTNEINLQ--L 182
Query: 209 QGPDSDKID-IGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEP-YPDIIFNITLRRKTL 266
D I+ I ID + + + EW I PA + EE + ++F + ++RK L
Sbjct: 183 SQEDGQTIEWIFIDPEAFTENGEWAIRHRPAKMLLDEAAPAEEAGHQKVVFYLLIQRKPL 242
Query: 267 FYTVNLIIPCVGISFLSVLVFYLPSDSG-EKVSLCXXXXXXXXXXXXXXAEIIPPTSLTV 325
FY +N+I PCV IS +++L+++LP+ +G +K ++ A+ +P TS V
Sbjct: 243 FYVINIIAPCVLISSVAILIYFLPAKAGGQKCTVAINVLLAQTVFLFLVAKKVPETSQAV 302
Query: 326 PLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQ-RP 383
PL+ KYL F +++ L VV + VLNV+ RSP TH M V KVF+ +LP++L + RP
Sbjct: 303 PLISKYLTFLLVVTILIVVNAVVVLNVSLRSPHTHSMARGVRKVFLRLLPQLLRMHVRP 361
Score = 125 (49.1 bits), Expect = 0.00016, P = 0.00016
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 511 LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
L T + +W DY+L+W P +YGG+ L VPS +W PDIVL N
Sbjct: 72 LTTNVWIEMQWCDYRLRWDPRDYGGLWVLRVPSTMVWRPDIVLEN 116
>WB|WBGene00001133 [details] [associations]
symbol:eat-2 species:6239 "Caenorhabditis elegans"
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0007274 "neuromuscular synaptic
transmission" evidence=IEP] [GO:0043051 "regulation of pharyngeal
pumping" evidence=IGI;IMP] [GO:0001508 "regulation of action
potential" evidence=IMP] [GO:0031594 "neuromuscular junction"
evidence=IDA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IMP] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 HSSP:P02711 GO:GO:0007274 GO:GO:0031594
GO:GO:0040014 GO:GO:0004889 HOGENOM:HOG000006756
GeneTree:ENSGT00630000089708 KO:K05312 GO:GO:0005892 GO:GO:0043051
eggNOG:NOG267445 GO:GO:0045203 GO:GO:0048609 GO:GO:0043050
EMBL:AL110490 PIR:T27006 RefSeq:NP_496959.1
ProteinModelPortal:Q9U298 SMR:Q9U298 EnsemblMetazoa:Y48B6A.4
GeneID:175072 KEGG:cel:CELE_Y48B6A.4 UCSC:Y48B6A.4 CTD:175072
WormBase:Y48B6A.4 InParanoid:Q9U298 OMA:FNSANEH NextBio:886636
GO:GO:0001508 Uniprot:Q9U298
Length = 474
Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
Identities = 130/374 (34%), Positives = 214/374 (57%)
Query: 12 MHVLFPSLTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQL 71
+ + F +L LV S+ +DE RL DL Y+ + RPV ++ + VK+ L L QL
Sbjct: 3 LKIAFFTLILLV-SIERVYSSDEEYRLLKDLREGYDPVERPVADHRKPVNVKLRLILQQL 61
Query: 72 IEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHI 131
++V+ +NQ++T VW NQ W DYKL+WSPEEYG + TL +P +
Sbjct: 62 VDVDERNQVITLVVW------NQYT---------WNDYKLRWSPEEYGNITTLQIPHGTL 106
Query: 132 WLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMK 191
W PDI+L+N+A+ +++ + ++ +G V++ PP I C + + +FP+D Q C +K
Sbjct: 107 WKPDILLFNSANEHFDASFPVHMVVSSNGDVLFAPPGIVSFSCSLSMTWFPYDQQVCYLK 166
Query: 192 FGSWTYDGYTVDLKHILQGPDSDKIDIG--IDLQDYYLSVEWDIMKVPAVRNEKFYSCCE 249
FGSWTY G +DL Q DSD D G +DLQ Y + E+D++ PA R + +
Sbjct: 167 FGSWTY-GKKLDL----QIDDSDLPD-GHKMDLQYYIPNGEFDLLATPAFRKSTTF--LD 218
Query: 250 EPYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXX 309
E Y ++ F++ L+R+T++Y +N I+P + IS ++L F +P + GEK++L
Sbjct: 219 ETYVELYFHMHLKRRTMYYGLNWIVPSILISLSNILGFTMPPECGEKITLQITNFLSVMV 278
Query: 310 XXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKV 369
+E+ PPTS ++P++ + +++++ LS+ ++ ++N+ FR P TH M W V
Sbjct: 279 FLAMVSEVAPPTSESIPIIAAFFSLSIVILGLSICASLIIVNIFFRHPKTHRMGDWTRYV 338
Query: 370 FIEVLPKILFIQRP 383
F+E LP L + RP
Sbjct: 339 FLEWLPWFLLMSRP 352
Score = 138 (53.6 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 521 WEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
W DYKL+WSPEEYG + TL +P +W PDI+L+N
Sbjct: 81 WNDYKLRWSPEEYGNITTLQIPHGTLWKPDILLFN 115
>UNIPROTKB|Q9U298 [details] [associations]
symbol:eat-2 "Neuronal acetylcholine receptor subunit
eat-2" species:6239 "Caenorhabditis elegans" [GO:0048609
"multicellular organismal reproductive process" evidence=IMP]
[GO:0043050 "pharyngeal pumping" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0045203
"integral to cell outer membrane" evidence=IDA] [GO:0005892
"acetylcholine-gated channel complex" evidence=IMP] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IMP] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 HSSP:P02711 GO:GO:0007274 GO:GO:0031594
GO:GO:0040014 GO:GO:0004889 HOGENOM:HOG000006756
GeneTree:ENSGT00630000089708 KO:K05312 GO:GO:0005892 GO:GO:0043051
eggNOG:NOG267445 GO:GO:0045203 GO:GO:0048609 GO:GO:0043050
EMBL:AL110490 PIR:T27006 RefSeq:NP_496959.1
ProteinModelPortal:Q9U298 SMR:Q9U298 EnsemblMetazoa:Y48B6A.4
GeneID:175072 KEGG:cel:CELE_Y48B6A.4 UCSC:Y48B6A.4 CTD:175072
WormBase:Y48B6A.4 InParanoid:Q9U298 OMA:FNSANEH NextBio:886636
GO:GO:0001508 Uniprot:Q9U298
Length = 474
Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
Identities = 130/374 (34%), Positives = 214/374 (57%)
Query: 12 MHVLFPSLTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQL 71
+ + F +L LV S+ +DE RL DL Y+ + RPV ++ + VK+ L L QL
Sbjct: 3 LKIAFFTLILLV-SIERVYSSDEEYRLLKDLREGYDPVERPVADHRKPVNVKLRLILQQL 61
Query: 72 IEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHI 131
++V+ +NQ++T VW NQ W DYKL+WSPEEYG + TL +P +
Sbjct: 62 VDVDERNQVITLVVW------NQYT---------WNDYKLRWSPEEYGNITTLQIPHGTL 106
Query: 132 WLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMK 191
W PDI+L+N+A+ +++ + ++ +G V++ PP I C + + +FP+D Q C +K
Sbjct: 107 WKPDILLFNSANEHFDASFPVHMVVSSNGDVLFAPPGIVSFSCSLSMTWFPYDQQVCYLK 166
Query: 192 FGSWTYDGYTVDLKHILQGPDSDKIDIG--IDLQDYYLSVEWDIMKVPAVRNEKFYSCCE 249
FGSWTY G +DL Q DSD D G +DLQ Y + E+D++ PA R + +
Sbjct: 167 FGSWTY-GKKLDL----QIDDSDLPD-GHKMDLQYYIPNGEFDLLATPAFRKSTTF--LD 218
Query: 250 EPYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXX 309
E Y ++ F++ L+R+T++Y +N I+P + IS ++L F +P + GEK++L
Sbjct: 219 ETYVELYFHMHLKRRTMYYGLNWIVPSILISLSNILGFTMPPECGEKITLQITNFLSVMV 278
Query: 310 XXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKV 369
+E+ PPTS ++P++ + +++++ LS+ ++ ++N+ FR P TH M W V
Sbjct: 279 FLAMVSEVAPPTSESIPIIAAFFSLSIVILGLSICASLIIVNIFFRHPKTHRMGDWTRYV 338
Query: 370 FIEVLPKILFIQRP 383
F+E LP L + RP
Sbjct: 339 FLEWLPWFLLMSRP 352
Score = 138 (53.6 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 521 WEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
W DYKL+WSPEEYG + TL +P +W PDI+L+N
Sbjct: 81 WNDYKLRWSPEEYGNITTLQIPHGTLWKPDILLFN 115
>UNIPROTKB|E2R2W1 [details] [associations]
symbol:CHRNG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
[GO:0005892 "acetylcholine-gated channel complex" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0042391 GO:GO:0004889 GO:GO:0005892
ProteinModelPortal:E2R2W1 Ensembl:ENSCAFT00000017990 Uniprot:E2R2W1
Length = 525
Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
Identities = 133/360 (36%), Positives = 204/360 (56%)
Query: 29 AQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVN 88
A+ ++ +RL DL+ NYN +RP ++SD + V + L L+ LI +N + + +TTNVW+
Sbjct: 25 AEARNQEERLLADLMHNYNPHLRPAEHDSDVVNVSLKLTLTNLISLNEREEALTTNVWIE 84
Query: 89 QNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEV 148
+W DY+L+W P++Y G+ L VPS +W PD+VL NN DG +EV
Sbjct: 85 M---------------QWCDYRLRWDPQDYEGLWVLRVPSTMVWRPDVVLENNVDGVFEV 129
Query: 149 TIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHIL 208
+ ++ DG V W PPAI++S C + V YFPFD Q C + F S TY ++L+ L
Sbjct: 130 ALYCNVLVSPDGCVYWLPPAIFRSSCPVSVTYFPFDWQNCSLVFQSQTYSTNEINLQ--L 187
Query: 209 QGPDSDKID-IGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEP-YPDIIFNITLRRKTL 266
D I+ I ID + + + EW I PA + EE + ++F + ++RK L
Sbjct: 188 SQEDGQTIEWIFIDPEAFTENGEWAIRHRPAKMLLDVAAPAEEAGHQKVVFYVLIQRKPL 247
Query: 267 FYTVNLIIPCVGISFLSVLVFYLPSDS--GEKVSLCXXXXXXXXXXXXXXAEIIPPTSLT 324
FY +N+I PCV IS +++L+++LP+ + G+K ++ A+ +P TS
Sbjct: 248 FYVINIIAPCVLISSVAILIYFLPAKAAGGQKCTVAINVLLAQTVFLFLVAKKVPETSQA 307
Query: 325 VPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQ-RP 383
VPL+ KYL F + + L VV + VLNV+ RSP TH M V KVF+ +LP++L + RP
Sbjct: 308 VPLISKYLTFLLAVTILIVVNAVVVLNVSLRSPHTHSMAHGVRKVFLRLLPQLLRMHVRP 367
Score = 118 (46.6 bits), Expect = 0.00093, P = 0.00093
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 511 LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
L T + +W DY+L+W P++Y G+ L VPS +W PD+VL N
Sbjct: 77 LTTNVWIEMQWCDYRLRWDPQDYEGLWVLRVPSTMVWRPDVVLEN 121
>UNIPROTKB|F6XNB0 [details] [associations]
symbol:CHRNG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0004889 GeneTree:ENSGT00620000087691
OMA:VFYLLIQ Ensembl:ENSCAFT00000017990 EMBL:AAEX03014447
Uniprot:F6XNB0
Length = 520
Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
Identities = 133/360 (36%), Positives = 204/360 (56%)
Query: 29 AQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVN 88
A+ ++ +RL DL+ NYN +RP ++SD + V + L L+ LI +N + + +TTNVW+
Sbjct: 20 AEARNQEERLLADLMHNYNPHLRPAEHDSDVVNVSLKLTLTNLISLNEREEALTTNVWIE 79
Query: 89 QNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEV 148
+W DY+L+W P++Y G+ L VPS +W PD+VL NN DG +EV
Sbjct: 80 M---------------QWCDYRLRWDPQDYEGLWVLRVPSTMVWRPDVVLENNVDGVFEV 124
Query: 149 TIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHIL 208
+ ++ DG V W PPAI++S C + V YFPFD Q C + F S TY ++L+ L
Sbjct: 125 ALYCNVLVSPDGCVYWLPPAIFRSSCPVSVTYFPFDWQNCSLVFQSQTYSTNEINLQ--L 182
Query: 209 QGPDSDKID-IGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEP-YPDIIFNITLRRKTL 266
D I+ I ID + + + EW I PA + EE + ++F + ++RK L
Sbjct: 183 SQEDGQTIEWIFIDPEAFTENGEWAIRHRPAKMLLDVAAPAEEAGHQKVVFYVLIQRKPL 242
Query: 267 FYTVNLIIPCVGISFLSVLVFYLPSDS--GEKVSLCXXXXXXXXXXXXXXAEIIPPTSLT 324
FY +N+I PCV IS +++L+++LP+ + G+K ++ A+ +P TS
Sbjct: 243 FYVINIIAPCVLISSVAILIYFLPAKAAGGQKCTVAINVLLAQTVFLFLVAKKVPETSQA 302
Query: 325 VPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQ-RP 383
VPL+ KYL F + + L VV + VLNV+ RSP TH M V KVF+ +LP++L + RP
Sbjct: 303 VPLISKYLTFLLAVTILIVVNAVVVLNVSLRSPHTHSMAHGVRKVFLRLLPQLLRMHVRP 362
Score = 118 (46.6 bits), Expect = 0.00092, P = 0.00092
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 511 LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
L T + +W DY+L+W P++Y G+ L VPS +W PD+VL N
Sbjct: 72 LTTNVWIEMQWCDYRLRWDPQDYEGLWVLRVPSTMVWRPDVVLEN 116
>UNIPROTKB|G5E9G9 [details] [associations]
symbol:CHRNA1 "Acetylcholine receptor subunit alpha"
species:9606 "Homo sapiens" [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0004889 EMBL:CH471058
UniGene:Hs.434479 HGNC:HGNC:1955 EMBL:AC018890
ProteinModelPortal:G5E9G9 SMR:G5E9G9 Ensembl:ENST00000409323
ArrayExpress:G5E9G9 Bgee:G5E9G9 Uniprot:G5E9G9
Length = 269
Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
Identities = 124/277 (44%), Positives = 174/277 (62%)
Query: 19 LTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKN 78
L F + S + G++ RL L +Y+ ++RPV ++ + V +GL+L QLI V+ N
Sbjct: 8 LLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINVDEVN 67
Query: 79 QIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVL 138
QI+TTNV LK Q+W DY LKW+P++YGGV +H+PSE IW PD+VL
Sbjct: 68 QIVTTNV----RLK-----------QQWVDYNLKWNPDDYGGVKKIHIPSEKIWRPDLVL 112
Query: 139 YNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYD 198
YNNADG++ + TK +L Y G + W PPAI+KS+CEI V +FPFD Q C MK G+WTYD
Sbjct: 113 YNNADGDFAIVKFTKVLLQYTGHITWTPPAIFKSYCEIIVTHFPFDEQNCSMKLGTWTYD 172
Query: 199 GYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEE-PYPDIIF 257
G V + P+SD+ D L ++ S EW I + ++ YSCC + PY DI +
Sbjct: 173 GSVVAIN-----PESDQPD----LSNFMESGEWVIKESRGWKHSVTYSCCPDTPYLDITY 223
Query: 258 NITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSG 294
+ ++R L++ VN+IIPC+ SFL+ LVFYLP+DSG
Sbjct: 224 HFVMQRLPLYFIVNVIIPCLLFSFLTGLVFYLPTDSG 260
Score = 163 (62.4 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 25/43 (58%), Positives = 33/43 (76%)
Query: 513 TPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
T + Q+W DY LKW+P++YGGV +H+PSE IW PD+VLYN
Sbjct: 72 TNVRLKQQWVDYNLKWNPDDYGGVKKIHIPSEKIWRPDLVLYN 114
>UNIPROTKB|Q60S81 [details] [associations]
symbol:eat-2 "Neuronal acetylcholine receptor subunit
eat-2" species:6238 "Caenorhabditis briggsae" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=ISS] [GO:0005892 "acetylcholine-gated channel complex"
evidence=ISS] [GO:0007274 "neuromuscular synaptic transmission"
evidence=ISS] [GO:0008340 "determination of adult lifespan"
evidence=ISS] [GO:0043050 "pharyngeal pumping" evidence=ISS]
[GO:0045203 "integral to cell outer membrane" evidence=ISS]
[GO:0048609 "multicellular organismal reproductive process"
evidence=ISS] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0008340 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HSSP:P02711 GO:GO:0007274
GO:GO:0004889 HOGENOM:HOG000006756 GO:GO:0005892 EMBL:HE600928
RefSeq:XP_002631787.1 ProteinModelPortal:Q60S81 GeneID:8573786
WormBase:CBG21000 eggNOG:NOG267445 GO:GO:0045203 GO:GO:0048609
GO:GO:0043050 Uniprot:Q60S81
Length = 481
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 125/373 (33%), Positives = 211/373 (56%)
Query: 12 MHVLFPSLTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQL 71
M +L L L+F + +A +D+ RL DL Y+ + RPV ++ + VK+ L L QL
Sbjct: 1 MFLLLQILYILLF-LNLADTSDDEYRLLKDLREGYDPMERPVSDHMKPVNVKLRLILQQL 59
Query: 72 IEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHI 131
++V+ KNQ++T VW W DYK+KWSPEEYG + +L +P +
Sbjct: 60 VDVDEKNQVITLVVWTQYT---------------WNDYKMKWSPEEYGNITSLQIPFGTL 104
Query: 132 WLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMK 191
W PDI+L+N+A+ +++ + ++ DG V++ PP I + C + + +FP+D Q C +K
Sbjct: 105 WKPDILLFNSANEHFDSSFPVNMVVSNDGNVLFAPPGIMQFSCSLSMTWFPYDEQVCYLK 164
Query: 192 FGSWTYDGYTVDLK-HILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEE 250
FGSWTY G +DL+ P+ K+D LQ Y + E+D++ PA R + +E
Sbjct: 165 FGSWTY-GKKLDLRIDDADLPEGHKMD----LQYYVPNGEFDLISTPAFRKSTTF--LDE 217
Query: 251 PYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXX 310
Y ++ F++ L+R+T++Y +N IIP + IS ++L F +P + GEKV+L
Sbjct: 218 TYVELYFHMHLKRRTMYYGLNWIIPSILISLSNILGFTMPVECGEKVTLQITNFLSIMVF 277
Query: 311 XXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVF 370
+E+ PPTS ++P++ + F ++++ +S+ V++ +N+ +R P H M W +F
Sbjct: 278 LAMVSEVAPPTSESIPIIAAFFSFAIVILGVSICVSLITVNIFYRHPKMHRMGDWTRYIF 337
Query: 371 IEVLPKILFIQRP 383
+E LP L + RP
Sbjct: 338 LEWLPWFLLMSRP 350
Score = 134 (52.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 521 WEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
W DYK+KWSPEEYG + +L +P +W PDI+L+N
Sbjct: 79 WNDYKMKWSPEEYGNITSLQIPFGTLWKPDILLFN 113
>ZFIN|ZDB-GENE-030131-3805 [details] [associations]
symbol:chrng "cholinergic receptor, nicotinic,
gamma" species:7955 "Danio rerio" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0007271 "synaptic transmission,
cholinergic" evidence=IDA] [GO:0005892 "acetylcholine-gated channel
complex" evidence=IDA] [GO:0015464 "acetylcholine receptor
activity" evidence=IDA] [GO:0045202 "synapse" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 ZFIN:ZDB-GENE-030131-3805 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0007271 GO:GO:0004889 GO:GO:0005892 CTD:1146
KO:K04818 EMBL:JN242070 RefSeq:NP_001240740.1 UniGene:Dr.162252
GeneID:325080 KEGG:dre:325080 Uniprot:G1FMP9
Length = 540
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 138/367 (37%), Positives = 207/367 (56%)
Query: 19 LTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKN 78
L L+F A N E L+ DL+ YN+ IRPV ++ D + VK+ + L+ LI +N K
Sbjct: 12 LWILLFRFSGALCNLEGS-LHRDLMVGYNKNIRPVESHGDIIDVKIKMTLTNLISLNEKE 70
Query: 79 QIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSP----EEYGGVDTLHVPSEHIWLP 134
+ +TT VW+ +W DY+L+W+ E Y + + +PS+ IWLP
Sbjct: 71 ETLTTCVWIEM---------------QWRDYRLRWANRTGLEVYENITRMRLPSKTIWLP 115
Query: 135 DIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGS 194
DI L NN DG +EV + ++ DG V W PPAIY+S C I V YFPFD Q C M F S
Sbjct: 116 DIGLENNVDGRFEVALYANTLIDPDGSVYWLPPAIYRSSCAIKVNYFPFDWQNCSMVFRS 175
Query: 195 WTYDGYTVDLKHILQGPDSDKID-IGIDLQDYYLSVEWDIMKVPAVRN-EKFYSCCEEPY 252
TY+ + L +L D+ ++ I ID + + + EW I PA + K Y E +
Sbjct: 176 QTYNSNEITL--MLSDEDNVTMEWIEIDPEAFTENGEWMIKHRPAKKVINKRYRPDELEH 233
Query: 253 PDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSG-EKVSLCXXXXXXXXXXX 311
+IIF + ++RK LFY +N+I+PCV S L +LV++LP+ +G +K ++
Sbjct: 234 QEIIFFLIIQRKPLFYVINIIVPCVLFSSLGLLVYFLPAKAGGQKCTMTICILLGQTVFL 293
Query: 312 XXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFI 371
A+ +P TS VPL+GKYL+F M + T++V+ + VLNV+ R+P TH M + KV +
Sbjct: 294 FLIAKKVPETSQAVPLIGKYLMFVMSVTTITVMNCVVVLNVSLRTPNTHPMSNTIRKVLL 353
Query: 372 EVLPKIL 378
+LP++L
Sbjct: 354 NILPRVL 360
>UNIPROTKB|E1BRV4 [details] [associations]
symbol:CHRNA1 "Acetylcholine receptor subunit alpha"
species:9031 "Gallus gallus" [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0004889
GeneTree:ENSGT00630000089708 EMBL:AADN02020075 EMBL:AADN02020076
EMBL:AADN02020077 IPI:IPI00822501 Ensembl:ENSGALT00000038665
ArrayExpress:E1BRV4 Uniprot:E1BRV4
Length = 352
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 121/307 (39%), Positives = 177/307 (57%)
Query: 87 VNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNY 146
+N + NQI+TTNV + Q+W D LKW+P++YGGV + +PS+ IW PD+VLYNNADG++
Sbjct: 60 INVDEVNQIVTTNVRLKQQWTDINLKWNPDDYGGVKQIRIPSDDIWRPDLVLYNNADGDF 119
Query: 147 EVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKH 206
+ TK +L + GK+ W PPAI+KS+CEI V YFPFD Q C MK G+WTYDG V +
Sbjct: 120 AIVKYTKVLLEHTGKITWTPPAIFKSYCEIIVTYFPFDQQNCSMKLGTWTYDGTMVVINP 179
Query: 207 ILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPD--IIFNITLRRK 264
+ S +++ PA R + + P+ I + L +K
Sbjct: 180 V--------------------SNARAVLRQPAPRGYRAINQVHAPHQSNPTIHRVLLAKK 219
Query: 265 TLFYTVNLIIPC-VGISF-LSVLVFYLPSD---SGEKVSLCXXXXXXXXXXXXXXAEIIP 319
+T + + IS + VLV + S +GEK++L E+IP
Sbjct: 220 LSTHTTYTSVHSYLMISTPVLVLVLLVLSSFCIAGEKMTLSISVLLSLTVFLLVIVELIP 279
Query: 320 PTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILF 379
TS VPL+GKY+LFTM+ V S+++T+ V+N + RSP TH M PWV K+FI+ +P I+F
Sbjct: 280 STSSAVPLIGKYMLFTMVFVIASIIITVIVINTHHRSPSTHTMPPWVRKIFIDTIPNIMF 339
Query: 380 --IQRPA 384
++RP+
Sbjct: 340 STMKRPS 346
Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
Identities = 89/182 (48%), Positives = 119/182 (65%)
Query: 22 LVFSVI-IAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQI 80
L+FS A + RL DDL +Y++++RPV N+ D + V +GL+L QLI V+ NQI
Sbjct: 9 LIFSAAGPALCYEHETRLVDDLFRDYSKVVRPVENHRDAVVVTVGLQLIQLINVDEVNQI 68
Query: 81 MTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 140
+TTNV LK Q+W D LKW+P++YGGV + +PS+ IW PD+VLYN
Sbjct: 69 VTTNV----RLK-----------QQWTDINLKWNPDDYGGVKQIRIPSDDIWRPDLVLYN 113
Query: 141 NADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGY 200
NADG++ + TK +L + GK+ W PPAI+KS+CEI V YFPFD Q C MK G+WTYDG
Sbjct: 114 NADGDFAIVKYTKVLLEHTGKITWTPPAIFKSYCEIIVTYFPFDQQNCSMKLGTWTYDGT 173
Query: 201 TV 202
V
Sbjct: 174 MV 175
Score = 145 (56.1 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 22/43 (51%), Positives = 31/43 (72%)
Query: 513 TPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
T + Q+W D LKW+P++YGGV + +PS+ IW PD+VLYN
Sbjct: 71 TNVRLKQQWTDINLKWNPDDYGGVKQIRIPSDDIWRPDLVLYN 113
>UNIPROTKB|B8ZZD3 [details] [associations]
symbol:CHRNA1 "Acetylcholine receptor subunit alpha"
species:9606 "Homo sapiens" [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 Pfam:PF02931 Pfam:PF02932 GO:GO:0016021
GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 HOVERGEN:HBG003756 HOGENOM:HOG000006756
HGNC:HGNC:1955 EMBL:AC018890 IPI:IPI00917035
ProteinModelPortal:B8ZZD3 SMR:B8ZZD3 STRING:B8ZZD3
Ensembl:ENST00000409542 ArrayExpress:B8ZZD3 Bgee:B8ZZD3
Uniprot:B8ZZD3
Length = 375
Score = 437 (158.9 bits), Expect = 1.8e-52, Sum P(2) = 1.8e-52
Identities = 89/203 (43%), Positives = 127/203 (62%)
Query: 186 QTCVMKFGSWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFY 245
Q C MK G+WTYDG V + P+SD+ D L ++ S EW I + ++ Y
Sbjct: 78 QNCSMKLGTWTYDGSVVAIN-----PESDQPD----LSNFMESGEWVIKESRGWKHSVTY 128
Query: 246 SCCEE-PYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXX 304
SCC + PY DI ++ ++R L++ VN+IIPC+ SFL+ LVFYLP+DSGEK++L
Sbjct: 129 SCCPDTPYLDITYHFVMQRLPLYFIVNVIIPCLLFSFLTGLVFYLPTDSGEKMTLSISVL 188
Query: 305 XXXXXXXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKP 364
E+IP TS VPL+GKY+LFTM+ V S+++T+ V+N + RSP THVM
Sbjct: 189 LSLTVFLLVIVELIPSTSSAVPLIGKYMLFTMVFVIASIIITVIVINTHHRSPSTHVMPN 248
Query: 365 WVHKVFIEVLPKILF---IQRPA 384
WV KVFI+ +P I+F ++RP+
Sbjct: 249 WVRKVFIDTIPNIMFFSTMKRPS 271
Score = 124 (48.7 bits), Expect = 1.8e-52, Sum P(2) = 1.8e-52
Identities = 29/79 (36%), Positives = 47/79 (59%)
Query: 19 LTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKN 78
L F + S + G++ RL L +Y+ ++RPV ++ + V +GL+L QLI V+ N
Sbjct: 8 LLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINVDEVN 67
Query: 79 QIMTTNVWVNQNLKNQIMT 97
QI+TTNV + QN ++ T
Sbjct: 68 QIVTTNVRLKQNCSMKLGT 86
>UNIPROTKB|E1C4Q6 [details] [associations]
symbol:E1C4Q6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PROSITE:PS00236 GO:GO:0016021 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GeneTree:ENSGT00630000089708 EMBL:AADN02055212
EMBL:AADN02055213 IPI:IPI00821979 Ensembl:ENSGALT00000036366
OMA:CCAVSET ArrayExpress:E1C4Q6 Uniprot:E1C4Q6
Length = 451
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 114/290 (39%), Positives = 166/290 (57%)
Query: 97 TTNVWVNQEW-EDYKLKW----SPEEYG-GVDTLHVPSEHIWLPDIVLYNNADGNYEVTI 150
+T W W ED W +P G GV +P W P + +AD + ++
Sbjct: 77 STPSWGLLGWVEDSGAHWCQPAAPHSSGVGVTVAALPHPP-W-PSLP---SADERFGGSM 131
Query: 151 MTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQG 210
T +L DG ++W+ PAI KS C++DV YFPFD Q C + FGSWTY+G +DL+++L
Sbjct: 132 ETNVVLRSDGHIMWDSPAITKSSCKVDVSYFPFDGQQCRLTFGSWTYNGNQIDLRNLL-- 189
Query: 211 PDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTV 270
D G DL D+ +VEW+++ +PA RN Y CC EPYPD+ + + LRR+ FY
Sbjct: 190 ------DTG-DLTDFVENVEWEVLGMPATRNVVTYGCCSEPYPDVTYILLLRRRASFYIF 242
Query: 271 NLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGK 330
NL++PCV ISFL+ L FYLP+DSGEKVSL AE +PP+ +VPL+GK
Sbjct: 243 NLLLPCVMISFLAPLGFYLPADSGEKVSLGVTVLLALTVFQLLVAESMPPSE-SVPLIGK 301
Query: 331 YLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFI 380
Y + TM ++T S +TI ++N++ P + PW ++ + L + L +
Sbjct: 302 YYIATMTMITASTALTIFIMNIHHCGPGARPVPPWARRLILHHLARALCV 351
>UNIPROTKB|F1NWW3 [details] [associations]
symbol:F1NWW3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PROSITE:PS00236 GO:GO:0016021 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 IPI:IPI00578800 GeneTree:ENSGT00630000089708
EMBL:AADN02055212 EMBL:AADN02055213 Ensembl:ENSGALT00000022103
ArrayExpress:F1NWW3 Uniprot:F1NWW3
Length = 329
Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
Identities = 101/239 (42%), Positives = 148/239 (61%)
Query: 142 ADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYT 201
AD + ++ T +L DG ++W+ PAI KS C++DV YFPFD Q C + FGSWTY+G
Sbjct: 1 ADERFGGSMETNVVLRSDGHIMWDSPAITKSSCKVDVSYFPFDGQQCRLTFGSWTYNGNQ 60
Query: 202 VDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITL 261
+DL+++L D G DL D+ +VEW+++ +PA RN Y CC EPYPD+ + + L
Sbjct: 61 IDLRNLL--------DTG-DLTDFVENVEWEVLGMPATRNVVTYGCCSEPYPDVTYILLL 111
Query: 262 RRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPT 321
RR+ FY NL++PCV ISFL+ L FYLP+DSGEKVSL AE +PP+
Sbjct: 112 RRRASFYIFNLLLPCVMISFLAPLGFYLPADSGEKVSLGVTVLLALTVFQLLVAESMPPS 171
Query: 322 SLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFI 380
+VPL+GKY + TM ++T S +TI ++N++ P + PW ++ + L + L +
Sbjct: 172 E-SVPLIGKYYIATMTMITASTALTIFIMNIHHCGPGARPVPPWARRLILHHLARALCV 229
>UNIPROTKB|Q494W8 [details] [associations]
symbol:CHRFAM7A "CHRNA7-FAM7A fusion protein" species:9606
"Homo sapiens" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PROSITE:PS00236
GO:GO:0016021 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 HOVERGEN:HBG003756 HOGENOM:HOG000006756
eggNOG:NOG235631 OrthoDB:EOG483D4K UniGene:Hs.510853 GeneID:89832
KEGG:hsa:89832 CTD:89832 PharmGKB:PA26483 EMBL:AK292984
EMBL:BC101346 EMBL:BC101347 EMBL:BC101348 EMBL:AC010799
EMBL:AC019322 EMBL:AF029838 RefSeq:NP_647536.1
ProteinModelPortal:Q494W8 SMR:Q494W8 STRING:Q494W8 DMDM:91208254
Ensembl:ENST00000299847 UCSC:uc001zdt.1 GeneCards:GC15M030653
H-InvDB:HIX0038397 HGNC:HGNC:15781 MIM:609756 neXtProt:NX_Q494W8
InParanoid:Q494W8 OMA:CDIADER PhylomeDB:Q494W8 BindingDB:Q494W8
GenomeRNAi:89832 NextBio:76307 ArrayExpress:Q494W8 Bgee:Q494W8
CleanEx:HS_CHRFAM7A Genevestigator:Q494W8
GermOnline:ENSG00000166664 Uniprot:Q494W8
Length = 412
Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
Identities = 106/255 (41%), Positives = 155/255 (60%)
Query: 129 EHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTC 188
+H+W+ + AD ++ T T +++ G + PP I+KS C IDV +FPFDVQ C
Sbjct: 17 QHLWIA--ANCDIADERFDATFHTNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQHC 74
Query: 189 VMKFGSWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCC 248
+KFGSW+Y G+++DL+ +Q D + Y + EWD++ +P R+E+FY CC
Sbjct: 75 KLKFGSWSYGGWSLDLQ--MQEAD---------ISGYIPNGEWDLVGIPGKRSERFYECC 123
Query: 249 EEPYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXX 308
+EPYPD+ F +T+RR+TL+Y +NL+IPCV IS L++LVF LP+DSGEK+SL
Sbjct: 124 KEPYPDVTFTVTMRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLT 183
Query: 309 XXXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHK 368
AEI+P TS +VPL+ +Y TMI+V LSVVVT+ VL + P M W
Sbjct: 184 VFMLLVAEIMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLQYHHHDPDGGKMPKWTRV 243
Query: 369 VFIEVLPKILFIQRP 383
+ + L ++RP
Sbjct: 244 ILLNWCAWFLRMKRP 258
>UNIPROTKB|I3L1T7 [details] [associations]
symbol:CHRNB1 "Acetylcholine receptor subunit beta"
species:9606 "Homo sapiens" [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0004889 HGNC:HGNC:1961
EMBL:AC113189 ProteinModelPortal:I3L1T7 SMR:I3L1T7
Ensembl:ENST00000576360 Bgee:I3L1T7 Uniprot:I3L1T7
Length = 380
Score = 432 (157.1 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
Identities = 84/202 (41%), Positives = 123/202 (60%)
Query: 96 MTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAI 155
M+T V+++ EW DY+L W P E+ G+D+L + +E +WLPD+VL NN DGN++V + +
Sbjct: 1 MSTKVYLDLEWTDYRLSWDPAEHDGIDSLRITAESVWLPDVVLLNNNDGNFDVALDISVV 60
Query: 156 LHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSD- 214
+ DG V W PP IY+S C I V YFPFD Q C M F S++YD V L+ L GPD
Sbjct: 61 VSSDGSVRWQPPGIYRSSCSIQVTYFPFDWQNCTMVFSSYSYDSSEVSLQTGL-GPDGQG 119
Query: 215 KIDIGIDLQDYYLSVEWDIMKVPAVRNEKF---YSCCEEPYPDIIFNITLRRKTLFYTVN 271
+I I + + +W+I+ P+ + E ++IF + +RRK LFY VN
Sbjct: 120 HQEIHIHEGTFIENGQWEIIHKPSRLIQPPGDPRGGREGQRQEVIFYLIIRRKPLFYLVN 179
Query: 272 LIIPCVGISFLSVLVFYLPSDS 293
+I PC+ I+ L++ VFYLP D+
Sbjct: 180 VIAPCILITLLAIFVFYLPPDA 201
Score = 131 (51.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 19/36 (52%), Positives = 27/36 (75%)
Query: 520 EWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
EW DY+L W P E+ G+D+L + +E +WLPD+VL N
Sbjct: 10 EWTDYRLSWDPAEHDGIDSLRITAESVWLPDVVLLN 45
Score = 110 (43.8 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
Identities = 26/67 (38%), Positives = 40/67 (59%)
Query: 317 IIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPK 376
+I P L + LL +F L +V++++ VLN++ RSP TH M WV ++FI LP
Sbjct: 180 VIAPCIL-ITLLA---IFVFYLPPDAVILSVVVLNLHHRSPHTHQMPLWVRQIFIHKLPL 235
Query: 377 ILFIQRP 383
L ++RP
Sbjct: 236 YLRLKRP 242
>WB|WBGene00000053 [details] [associations]
symbol:acr-14 species:6239 "Caenorhabditis elegans"
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0040011
"locomotion" evidence=IMP] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 HSSP:P02711 GO:GO:0040011 GO:GO:0004889
HOGENOM:HOG000006756 GeneTree:ENSGT00630000089708 EMBL:Z66500
PIR:T24504 RefSeq:NP_495716.1 UniGene:Cel.16093
ProteinModelPortal:Q22224 SMR:Q22224 EnsemblMetazoa:T05C12.2
GeneID:191601 KEGG:cel:CELE_T05C12.2 UCSC:T05C12.2 CTD:191601
WormBase:T05C12.2 eggNOG:NOG304378 InParanoid:Q22224 OMA:MSILAYM
NextBio:949632 Uniprot:Q22224
Length = 500
Score = 317 (116.6 bits), Expect = 4.5e-50, Sum P(2) = 4.5e-50
Identities = 70/200 (35%), Positives = 113/200 (56%)
Query: 14 VLFPSLTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIE 73
V F LTF I +G+ + RL L NY+ RPV N+S L VK+ L+Q+++
Sbjct: 4 VFFILLTFY----IQVKGSVDEYRLLQYLKENYDSFERPVENSSAPLDVKVRFLLNQIMD 59
Query: 74 VNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEH--- 130
V+ KNQ+M+ I+ +++ W DYKL W P+ +GG+ + +
Sbjct: 60 VDEKNQVMS------------ILA---YMDYHWNDYKLTWDPKLFGGIRDVRFSGDDDAS 104
Query: 131 --IWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTC 188
+W PD++L+N+ +++ T ++ I+ +G V NPP I++ C+IDV Y+PFD QTC
Sbjct: 105 FKLWRPDVLLFNSVSESFDSTYSSRFIVSSNGDVQQNPPGIFRFVCQIDVTYYPFDKQTC 164
Query: 189 VMKFGSWTYDGYTVDLKHIL 208
+K GSWTY+G ++L +L
Sbjct: 165 FLKLGSWTYNGQYINLDFLL 184
Score = 265 (98.3 bits), Expect = 4.5e-50, Sum P(2) = 4.5e-50
Identities = 61/169 (36%), Positives = 95/169 (56%)
Query: 216 IDIGIDLQDYYLSVEWDIMKVPAVRN-EKFYSCCEEPYPDIIFNITLRRKTLFYTVNLII 274
++ IDLQ Y + EWD+ P R +KF + + Y ++ F I +RR+TL Y +NLII
Sbjct: 211 VNESIDLQVYLQNGEWDLEGTPGKRVVQKFGT---DEYHELYFYIHIRRRTLAYGINLII 267
Query: 275 PCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLF 334
P + IS +++L F LP D+ EK++L + PP S +VP+L +
Sbjct: 268 PSLVISMMTILGFTLPPDACEKITLETTVLLSVIFFLQMVSSTSPPQSQSVPILAAFFSC 327
Query: 335 TMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQRP 383
++LV S V T+ L+++ R P TH M P + K+FI+ LP IL + +P
Sbjct: 328 CLMLVACSCVFTVLTLSLHHRKPETHEMSPTMRKIFIDWLPYILCMCKP 376
>UNIPROTKB|F1MQB9 [details] [associations]
symbol:CHRNA7 "Neuronal acetylcholine receptor subunit
alpha-7" species:9913 "Bos taurus" [GO:0009897 "external side of
plasma membrane" evidence=IEA] [GO:0008306 "associative learning"
evidence=IEA] [GO:0007613 "memory" evidence=IEA] [GO:0007271
"synaptic transmission, cholinergic" evidence=IEA] [GO:0006897
"endocytosis" evidence=IEA] [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] [GO:0001988
"positive regulation of heart rate involved in baroreceptor
response to decreased systemic arterial blood pressure"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0060112
"generation of ovulation cycle rhythm" evidence=IEA] [GO:0050728
"negative regulation of inflammatory response" evidence=IEA]
[GO:0048149 "behavioral response to ethanol" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
[GO:0042113 "B cell activation" evidence=IEA] [GO:0042110 "T cell
activation" evidence=IEA] [GO:0035095 "behavioral response to
nicotine" evidence=IEA] [GO:0032720 "negative regulation of tumor
necrosis factor production" evidence=IEA] [GO:0032715 "negative
regulation of interleukin-6 production" evidence=IEA] [GO:0032691
"negative regulation of interleukin-1 beta production"
evidence=IEA] [GO:0032225 "regulation of synaptic transmission,
dopaminergic" evidence=IEA] [GO:0032094 "response to food"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0016324 "apical plasma membrane" evidence=IEA] [GO:0014061
"regulation of norepinephrine secretion" evidence=IEA]
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PROSITE:PS00236
GO:GO:0016021 GO:GO:0009897 GO:GO:0016324 GO:GO:0007613
GO:GO:0035095 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0050728
GO:GO:0006897 GO:GO:0014061 GO:GO:0007271 GO:GO:0042391
GO:GO:0004889 GeneTree:ENSGT00630000089708 GO:GO:0042113
IPI:IPI00688255 GO:GO:0032720 OMA:AGPPATN GO:GO:0008306
GO:GO:0048149 GO:GO:0060112 GO:GO:0032691 GO:GO:0032715
GO:GO:0001988 GO:GO:0032225 GO:GO:0032094 GO:GO:0030317
GO:GO:0042110 EMBL:DAAA02052400 Ensembl:ENSBTAT00000020942
Uniprot:F1MQB9
Length = 389
Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
Identities = 105/246 (42%), Positives = 151/246 (61%)
Query: 138 LYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTY 197
L ++AD ++ T T +++ G + PP I+KS C IDV +FPFDVQ C +KFGSW+Y
Sbjct: 1 LVSSADERFDATFHTNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQQCKLKFGSWSY 60
Query: 198 DGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIF 257
G+++DL+ +Q D + Y + EWD++ V R+EKFY CC+EPYPD+ F
Sbjct: 61 GGWSLDLQ--MQEAD---------ISGYIPNGEWDLVGVLGKRSEKFYECCKEPYPDVTF 109
Query: 258 NITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEI 317
+++RR+TL+Y +NL+IPCV IS L++LVF LP+DSGEK+SL AEI
Sbjct: 110 TVSIRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEI 169
Query: 318 IPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKI 377
+P TS +VPL+ +Y TMI+V LSVVVT+ VL + P M W + +
Sbjct: 170 MPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLQYHHHDPDGGKMPKWTRVILLNWCAWF 229
Query: 378 LFIQRP 383
L ++RP
Sbjct: 230 LRMKRP 235
>UNIPROTKB|F1SNR6 [details] [associations]
symbol:CHRNA7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060112 "generation of ovulation cycle rhythm"
evidence=IEA] [GO:0050728 "negative regulation of inflammatory
response" evidence=IEA] [GO:0048149 "behavioral response to
ethanol" evidence=IEA] [GO:0042391 "regulation of membrane
potential" evidence=IEA] [GO:0042113 "B cell activation"
evidence=IEA] [GO:0042110 "T cell activation" evidence=IEA]
[GO:0035095 "behavioral response to nicotine" evidence=IEA]
[GO:0032720 "negative regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032715 "negative regulation of
interleukin-6 production" evidence=IEA] [GO:0032691 "negative
regulation of interleukin-1 beta production" evidence=IEA]
[GO:0032225 "regulation of synaptic transmission, dopaminergic"
evidence=IEA] [GO:0032094 "response to food" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0016324 "apical
plasma membrane" evidence=IEA] [GO:0014061 "regulation of
norepinephrine secretion" evidence=IEA] [GO:0009897 "external side
of plasma membrane" evidence=IEA] [GO:0008306 "associative
learning" evidence=IEA] [GO:0007613 "memory" evidence=IEA]
[GO:0007271 "synaptic transmission, cholinergic" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0001988 "positive regulation of heart rate
involved in baroreceptor response to decreased systemic arterial
blood pressure" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PROSITE:PS00236
GO:GO:0016021 GO:GO:0009897 GO:GO:0016324 GO:GO:0007613
GO:GO:0035095 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0050728
GO:GO:0006897 GO:GO:0014061 GO:GO:0007271 GO:GO:0042391
GO:GO:0004889 GeneTree:ENSGT00630000089708 GO:GO:0042113
GO:GO:0032720 OMA:AGPPATN GO:GO:0008306 GO:GO:0048149 GO:GO:0060112
GO:GO:0032691 GO:GO:0032715 GO:GO:0001988 GO:GO:0032225
GO:GO:0032094 GO:GO:0030317 GO:GO:0042110 EMBL:CU694767
Ensembl:ENSSSCT00000005341 Uniprot:F1SNR6
Length = 390
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 105/247 (42%), Positives = 150/247 (60%)
Query: 140 NNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDG 199
++AD ++ T +++ G + PP I+KS C IDV +FPFDVQ C +KFGSW+Y G
Sbjct: 1 SSADERFDATFHNNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQQCKLKFGSWSYGG 60
Query: 200 YTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMK---VPAVRNEKFYSCCEEPYPDII 256
+++DL+ +Q D + Y + EWD++ +P RNEKFY CC+EPYPD+
Sbjct: 61 WSLDLQ--MQEAD---------ISGYIPNGEWDLVGNEGIPGKRNEKFYECCKEPYPDVT 109
Query: 257 FNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAE 316
F +T+RR+TL+Y +NL+IPCV IS L++LVF LP+DSGEK+SL AE
Sbjct: 110 FTVTIRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAE 169
Query: 317 IIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPK 376
I+P TS +VPL+ +Y TMI+V LSVVVT+ VL + P M W + +
Sbjct: 170 IMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLQYHHHDPDGGKMPKWTRVILLNWCAW 229
Query: 377 ILFIQRP 383
L ++RP
Sbjct: 230 FLRMKRP 236
>WB|WBGene00000054 [details] [associations]
symbol:acr-15 species:6239 "Caenorhabditis elegans"
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007268
"synaptic transmission" evidence=IMP] [GO:0045202 "synapse"
evidence=IC] [GO:0015464 "acetylcholine receptor activity"
evidence=ISS] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0045202 GO:GO:0004889
HOGENOM:HOG000006756 GeneTree:ENSGT00630000089708 EMBL:FO080489
KO:K05312 GO:GO:0015464 PIR:E89134 RefSeq:NP_505206.2
ProteinModelPortal:O16926 SMR:O16926 EnsemblMetazoa:F25G6.4
GeneID:191602 KEGG:cel:CELE_F25G6.4 UCSC:F25G6.4 CTD:191602
WormBase:F25G6.4 eggNOG:NOG288903 InParanoid:O16926 OMA:AICIFLT
NextBio:949636 Uniprot:O16926
Length = 479
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 117/371 (31%), Positives = 180/371 (48%)
Query: 14 VLFPSLTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIE 73
+L P L + + G+ RL +DL+S Y R RP ++S + V +G+ L Q+I
Sbjct: 1 MLLPILLHFLLLITQLNGSPAEVRLINDLMSGYVREERPTLDSSKPVVVSLGVFLQQIIN 60
Query: 74 VNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWL 133
++ K + + N W LK Q W D L+W P Y V L P + +W
Sbjct: 61 LSEKEEQLEVNAW----LKFQ-----------WRDENLRWEPTAYENVTDLRHPPDALWT 105
Query: 134 PDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFG 193
PDI+LYN+ D ++ + + ++ G + W PP I+K C++D+ +FPFD Q C KFG
Sbjct: 106 PDILLYNSVDSEFDSSYKVNLVNYHTGNINWMPPGIFKVSCKLDIYWFPFDEQVCYFKFG 165
Query: 194 SWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYP 253
SWTY + L +K D D ++ + EW I+ K Y CC E Y
Sbjct: 166 SWTYTRDKIQL---------EKGDF--DFSEFIPNGEWIIIDYRTNITVKQYECCPEQYE 214
Query: 254 DIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXX 313
DI F + LRR+TL+Y+ NLI P + L +L F + ++ EKV L
Sbjct: 215 DITFTLHLRRRTLYYSFNLIAPVLLTMILVILGFTVSPETCEKVGLQISVSLAICIFLTI 274
Query: 314 XAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHV-MKPWVHKVFIE 372
+E+ P TS VPLLG + + L+ T+ V + +FR+ H M W+ + +E
Sbjct: 275 MSELTPQTSEAVPLLGVFFHTCNFISVLATSFTVYVQSFHFRNQHVHERMDFWMRFILLE 334
Query: 373 VLPKILFIQRP 383
P +L ++ P
Sbjct: 335 WSPWLLRMKMP 345
>UNIPROTKB|H7BYM0 [details] [associations]
symbol:CHRNA5 "Neuronal acetylcholine receptor subunit
alpha-5" species:9606 "Homo sapiens" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF63712 GO:GO:0004889 EMBL:AC027228 HGNC:HGNC:1959
Ensembl:ENST00000394802 Uniprot:H7BYM0
Length = 182
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 95/198 (47%), Positives = 130/198 (65%)
Query: 51 RPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYK 110
RPV + +DK+ +K GL +SQL++V+ KNQ+MTTNVW LK QEW D K
Sbjct: 2 RPVEHLNDKIKIKFGLAISQLVDVDEKNQLMTTNVW----LK-----------QEWIDVK 46
Query: 111 LKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIY 170
L+W+P++YGG+ + VPS+ +W PDIVL++NADG +E T TK ++ Y+G V W PPA Y
Sbjct: 47 LRWNPDDYGGIKVIRVPSDSVWTPDIVLFDNADGRFEGT-STKTVIRYNGTVTWTPPANY 105
Query: 171 KSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVE 230
KS C IDV +FPFD+Q C MKFGSWTYDG VD+ IL+ D DK +D++ + E
Sbjct: 106 KSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDI--ILEDQDVDK-------RDFFDNGE 156
Query: 231 WDIMKVPAVRNEKFYSCC 248
W+I+ + + SCC
Sbjct: 157 WEIVSATGSKGNRTDSCC 174
Score = 139 (54.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 511 LLTPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+ T + QEW D KL+W+P++YGG+ + VPS+ +W PDIVL++
Sbjct: 32 MTTNVWLKQEWIDVKLRWNPDDYGGIKVIRVPSDSVWTPDIVLFD 76
>UNIPROTKB|G3N2K7 [details] [associations]
symbol:CHRNA7 "Neuronal acetylcholine receptor subunit
alpha-7" species:9913 "Bos taurus" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PROSITE:PS00236 GO:GO:0016021 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GeneTree:ENSGT00630000089708 EMBL:DAAA02052400
ProteinModelPortal:G3N2K7 Ensembl:ENSBTAT00000064296 Uniprot:G3N2K7
Length = 360
Score = 410 (149.4 bits), Expect = 2.0e-45, Sum P(2) = 2.0e-45
Identities = 77/162 (47%), Positives = 112/162 (69%)
Query: 138 LYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTY 197
L ++AD ++ T T +++ G + PP I+KS C IDV +FPFDVQ C +KFGSW+Y
Sbjct: 1 LVSSADERFDATFHTNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQQCKLKFGSWSY 60
Query: 198 DGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIF 257
G+++DL+ +Q D + Y + EWD++ V R+EKFY CC+EPYPD+ F
Sbjct: 61 GGWSLDLQ--MQEAD---------ISGYIPNGEWDLVGVLGKRSEKFYECCKEPYPDVTF 109
Query: 258 NITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSL 299
+++RR+TL+Y +NL+IPCV IS L++LVF LP+DSGEK+SL
Sbjct: 110 TVSIRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISL 151
Score = 84 (34.6 bits), Expect = 2.0e-45, Sum P(2) = 2.0e-45
Identities = 22/67 (32%), Positives = 32/67 (47%)
Query: 317 IIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPK 376
++P S L +Y TMI+V LSVVVT+ VL + P M W + +
Sbjct: 140 LLPADSGEKISLAQYFASTMIIVGLSVVVTVIVLQYHHHDPDGGKMPKWTRVILLNWCAW 199
Query: 377 ILFIQRP 383
L ++RP
Sbjct: 200 FLRMKRP 206
>UNIPROTKB|I3LDY9 [details] [associations]
symbol:LOC100626974 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0004889 GeneTree:ENSGT00630000089708
OMA:HREIVQV Ensembl:ENSSSCT00000029889 Uniprot:I3LDY9
Length = 473
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 127/385 (32%), Positives = 203/385 (52%)
Query: 18 SLTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLK 77
S++F V + G++ RL L +YN ++RPV ++ + V +GL+L QLI V+
Sbjct: 7 SVSFAVSXAGLVLGSEHETRLVAKLFEDYNSVVRPVEDHRQAVEVTVGLQLIQLINVDEV 66
Query: 78 NQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIV 137
NQI+TTNV + Q ++ ++++ GV H W+ +
Sbjct: 67 NQIVTTNVRLKQVIQISMVSSKCAAL----------------GVGYFHNVGLEQWVDYNL 110
Query: 138 LYNNAD--GNYEVTIMTKAILHYDGKVVWNPP----AIYKSFCEIDVEYFPFDVQT---- 187
+N D G ++ I ++ I H D V++N AI K F ++ ++Y T
Sbjct: 111 KWNPDDYGGVKKIHIPSEKIWHPDF-VLYNNADGDFAIVK-FTKVLLDYTGHITWTPPAI 168
Query: 188 ----CVMKFGSWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEK 243
C + + +D +K + P+SD+ D L ++ S EW I + ++
Sbjct: 169 FKSYCEIIVTHFPFDEQNCSMKVVAINPESDQPD----LSNFMESGEWVIKEARGWKHRV 224
Query: 244 FYSCCEE-PYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXX 302
Y+CC PY DI ++ ++R L++ VN+IIPC+ SFL+ LVFYLP+DSGEK++L
Sbjct: 225 LYACCPSTPYLDITYHFVMQRLPLYFIVNVIIPCLLFSFLTGLVFYLPTDSGEKMTLSIS 284
Query: 303 XXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVM 362
E+IP TS VPL+GKY+LFTM+ V S+++T+ V+N + RSP THVM
Sbjct: 285 VLLSLTVFLLVIVELIPSTSSAVPLIGKYMLFTMVFVIASIIITVIVINTHHRSPSTHVM 344
Query: 363 KPWVHKVFIEVLPKILF---IQRPA 384
WV KVFI+ +P I+F ++RP+
Sbjct: 345 PEWVRKVFIDTIPNIMFFSTMKRPS 369
Score = 157 (60.3 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 518 LQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
L++W DY LKW+P++YGGV +H+PSE IW PD VLYN
Sbjct: 102 LEQWVDYNLKWNPDDYGGVKKIHIPSEKIWHPDFVLYN 139
>WB|WBGene00000057 [details] [associations]
symbol:acr-18 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PROSITE:PS00236
GO:GO:0016021 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
GeneTree:ENSGT00570000078866 HSSP:P02711 KO:K05312 EMBL:Z81071
EMBL:AY523513 PIR:T21509 RefSeq:NP_506868.2 UniGene:Cel.23972
ProteinModelPortal:G5EG72 SMR:G5EG72 EnsemblMetazoa:F28F8.1
GeneID:191604 KEGG:cel:CELE_F28F8.1 CTD:191604 WormBase:F28F8.1
OMA:VEENEME NextBio:949646 Uniprot:G5EG72
Length = 510
Score = 449 (163.1 bits), Expect = 5.3e-45, Sum P(2) = 5.3e-45
Identities = 103/340 (30%), Positives = 173/340 (50%)
Query: 36 KRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQI 95
+ LY+ L +Y + IRPV N S+ L V++ L Q+++V+ ++QI+ N++
Sbjct: 31 RNLYEHLFLDYVKEIRPVRNESESLKVEIKFWLKQILKVDERDQIV--NIYC-------- 80
Query: 96 MTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM-TKA 154
W+ W D L W P+++G + +HVP+ IW PD+++YNNA+ N E M T A
Sbjct: 81 -----WLELYWIDETLTWDPKKFGNLSRIHVPAHKIWKPDVLVYNNANMNVEENEMETNA 135
Query: 155 ILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSD 214
I+ G+V+ I C ++++ FPFD Q C + F SW+ DG +DL P +D
Sbjct: 136 IVDNTGRVMLFRSMITDISCNLNLQQFPFDQQICFVTFASWSMDGSKLDLSAT---PKTD 192
Query: 215 KIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLII 274
+++ Y + EW + +K Y CC P+PD+ + + LRR +Y +L+I
Sbjct: 193 NLEL------YIRNTEWGLTDFRVKIYQKIYDCCPHPFPDVTYFMVLRRSPSYYIFSLVI 246
Query: 275 PCVGISFLSVLVFYLP-SDSGE---KVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGK 330
P I+ ++++ F+ P S +GE KVSL ++ +P TS +PL+GK
Sbjct: 247 PSAFITVVTIVGFFTPHSTTGENTEKVSLGVTALLSMAIIMMMVSDEVPATSEVIPLIGK 306
Query: 331 YLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVF 370
Y + + L+ ++ T L+ R + P V F
Sbjct: 307 YYIGLIFLIFMAAFTTTLTLSYQMRGNSGQEVDPRVRDFF 346
Score = 41 (19.5 bits), Expect = 5.3e-45, Sum P(2) = 5.3e-45
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 488 LTWRLPYELPSKLAR 502
++W ++LP KL R
Sbjct: 356 ISWAFSFQLPKKLLR 370
>WB|WBGene00000056 [details] [associations]
symbol:acr-17 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PROSITE:PS00236
GO:GO:0016021 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
GeneTree:ENSGT00570000078866 EMBL:FO080714 GeneID:191603
KEGG:cel:CELE_F53E10.2 CTD:191603 RefSeq:NP_001023961.1
ProteinModelPortal:Q6F6K3 SMR:Q6F6K3 PRIDE:Q6F6K3
EnsemblMetazoa:F53E10.2b UCSC:F53E10.2a WormBase:F53E10.2b
HOGENOM:HOG000021444 InParanoid:Q6F6K3 OMA:PDISYFF NextBio:949640
ArrayExpress:Q6F6K3 Uniprot:Q6F6K3
Length = 515
Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
Identities = 111/362 (30%), Positives = 187/362 (51%)
Query: 19 LTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKN 78
L +V ++ + K+L L +Y++ +RPV + S T + +++ K
Sbjct: 8 LRIVVLHFLMGLAMAQQKQLIKYLFRDYHKELRPVKDESSGPT-------NVTVQLYFK- 59
Query: 79 QIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVL 138
QI V++N +QI+T W+ + W+D L W+P ++G + +LHVPSE IW PD+++
Sbjct: 60 QIQK----VHEN--DQIITLYCWIEEYWQDEFLTWNPSDFGNIKSLHVPSEMIWKPDLLV 113
Query: 139 YNNADGNY-EVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTY 197
YNNA+ N E + T + + GK+ I C++ +E FP+D Q C + SW+Y
Sbjct: 114 YNNANMNIKENEMQTNVQIEHTGKISLFRAIITDITCDLQMEKFPYDQQICFIMLASWSY 173
Query: 198 DGYTVDLKHILQGPDSDKIDI----GIDLQDYYL-SVEWDIMKVPAVRNEKFYSCCEEPY 252
DG + L Q P +DI + + ++Y+ ++EW ++ N K+Y CC PY
Sbjct: 174 DGSQIMLNTAEQ-PTEAPLDIKNTTNLAILNHYIPNMEWKLVDFRYRNNLKYYDCCPNPY 232
Query: 253 PDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLP-SDSGE---KVSLCXXXXXXXX 308
PDI + ++R +Y LIIP I+ ++V+ F+ P S +GE KVSL
Sbjct: 233 PDISYFFAIKRNPSYYLFTLIIPSAFITIVTVIGFFTPHSSTGENTEKVSLGVTALLSLA 292
Query: 309 XXXXXXAEIIPPTSLTVPLLGKY---LLFTMILVTLSVVVTIAV-LNVNFRSPVTHVMKP 364
++ +P TS +VPLLG+Y L+F M L T T+ + + N P+T ++
Sbjct: 293 IILMMVSDKLPATSNSVPLLGQYYIGLIFIMFLATYCTTFTLGIQMQGNAGRPITRRLRS 352
Query: 365 WV 366
++
Sbjct: 353 FL 354
Score = 130 (50.8 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 22/56 (39%), Positives = 39/56 (69%)
Query: 502 RLASIHFCD-LLTPINFLQE-WEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
++ +H D ++T +++E W+D L W+P ++G + +LHVPSE IW PD+++YN
Sbjct: 60 QIQKVHENDQIITLYCWIEEYWQDEFLTWNPSDFGNIKSLHVPSEMIWKPDLLVYN 115
>WB|WBGene00017580 [details] [associations]
symbol:lgc-4 species:6239 "Caenorhabditis elegans"
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002394 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00570000078866 GO:GO:0004889
EMBL:FO080202 PIR:A89606 RefSeq:NP_509556.4
ProteinModelPortal:P54245 SMR:P54245 EnsemblMetazoa:F18G5.4
GeneID:181155 KEGG:cel:CELE_F18G5.4 CTD:181155 WormBase:F18G5.4
eggNOG:NOG317908 HOGENOM:HOG000113319 InParanoid:P54245 OMA:QHEIREE
NextBio:912646 Uniprot:P54245
Length = 635
Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
Identities = 100/291 (34%), Positives = 158/291 (54%)
Query: 84 NVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNAD 143
N V + +NQ +TT W+N W D +L W+ + + +++P IW PDI+L NNA
Sbjct: 147 NQIVEMDERNQALTTRSWLNINWMDPRLSWNESLWSEIKAIYIPHARIWKPDIILVNNAI 206
Query: 144 GNYEVTIM-TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTV 202
Y +++ T ++ DG V W A+++S C I V Y+PFD Q C +KF SW++D +
Sbjct: 207 REYYASLVSTDVMVTSDGNVTWLFSALFRSSCPIRVRYYPFDDQQCDLKFASWSHDITEI 266
Query: 203 DLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNE-KFYSCCEEPYPDIIFNITL 261
+L G ++DK G DL Y + E+D++ + AVR F S +P I+ I +
Sbjct: 267 NL-----GLNTDK---G-DLSSYMNNSEFDLVDMTAVREVVTFPSDTNSDWPIIVIRIHM 317
Query: 262 RRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPT 321
R+ LFY N I+PCV IS ++VL F +P ++GEK+++ E IPPT
Sbjct: 318 HRRPLFYVFNHIVPCVLISSMAVLGFLMPPETGEKINMIITTLLSMGVYLQSITESIPPT 377
Query: 322 SLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVT---HV---MKPWV 366
S VPL+G Y + ++++V L+ V + LN++ HV M+ W+
Sbjct: 378 SEGVPLIGMYYVSSLLMVCLATCVNVITLNMHRNGAANQGRHVPAWMQKWI 428
Score = 273 (101.2 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 60/177 (33%), Positives = 96/177 (54%)
Query: 31 GNDEAKRLYDDLLSN--YNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVN 88
G +EA LY LL + Y + +RP ++S V G L+Q++E++ +NQ +TT W+N
Sbjct: 109 GTEEA--LYRSLLDHTVYEKDVRPCIHHSQPTNVTFGFLLNQIVEMDERNQALTTRSWLN 166
Query: 89 QNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEV 148
N W D +L W+ + + +++P IW PDI+L NNA Y
Sbjct: 167 IN---------------WMDPRLSWNESLWSEIKAIYIPHARIWKPDIILVNNAIREYYA 211
Query: 149 TIM-TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
+++ T ++ DG V W A+++S C I V Y+PFD Q C +KF SW++D ++L
Sbjct: 212 SLVSTDVMVTSDGNVTWLFSALFRSSCPIRVRYYPFDDQQCDLKFASWSHDITEINL 268
>UNIPROTKB|I3LP25 [details] [associations]
symbol:I3LP25 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00254 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0004889 EMBL:CU929524
Ensembl:ENSSSCT00000031461 GeneTree:ENSGT00700000104693 OMA:REAFTEN
Uniprot:I3LP25
Length = 369
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 117/352 (33%), Positives = 183/352 (51%)
Query: 31 GNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQN 90
G +E RLY L NY+ RPV D +TV + + L+ LI +N K + +TT+VW+
Sbjct: 22 GKNEELRLYHHLFDNYDPGRRPVREPKDTVTVSLKVTLTNLISLNEKEETLTTSVWIGI- 80
Query: 91 LKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGN--YEV 148
+W DY+L +S ++GG++TL VPSE +WLP+IVL N +G+ + V
Sbjct: 81 --------------DWSDYRLNYSKADFGGIETLRVPSELVWLPEIVLENKLEGSEVWGV 126
Query: 149 TIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHIL 208
+ A+ Y G+ P + + E P + S TY V+ +
Sbjct: 127 GLDPSAV-GYRGQGWGQLPGRGR---RLGPESEPLGWGSWPWLRSSQTYSAEEVEFVFAV 182
Query: 209 Q--GPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYP-DIIFNITLRRKT 265
G K++I D + Y + EW I P V S ++P D+ + + +RRK
Sbjct: 183 DDLGETISKLEI--DTEAYTENGEWAIDFCPGVIRRHDGSSPDDPGDSDVTYTLIIRRKP 240
Query: 266 LFYTVNLIIPCVGISFLSVLVFYLPSDSG-EKVSLCXXXXXXXXXXXXXXAEIIPPTSLT 324
LFY +N+I+PCV IS L +L ++LP+ +G +K ++ A+ IP TSL+
Sbjct: 241 LFYVINIIVPCVLISGLVLLAYFLPAQAGGQKCTVSINVLLAQTVFLFLIAQKIPETSLS 300
Query: 325 VPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWV-HKVFIEVLP 375
VPLLG+YL+F M++ TL V+ + VLNV+ R+P TH + P + H + +LP
Sbjct: 301 VPLLGRYLIFVMVVATLIVMNCVIVLNVSLRTPTTHTVSPRLRHALLGFLLP 352
Score = 127 (49.8 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 20/36 (55%), Positives = 29/36 (80%)
Query: 520 EWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
+W DY+L +S ++GG++TL VPSE +WLP+IVL N
Sbjct: 81 DWSDYRLNYSKADFGGIETLRVPSELVWLPEIVLEN 116
>UNIPROTKB|H7BYH0 [details] [associations]
symbol:CHRNG "Acetylcholine receptor subunit gamma"
species:9606 "Homo sapiens" [GO:0004889 "acetylcholine-activated
cation-selective channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR002394
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00254 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0004889
EMBL:AC092165 HGNC:HGNC:1967 ProteinModelPortal:H7BYH0 SMR:H7BYH0
Ensembl:ENST00000389492 Bgee:H7BYH0 Uniprot:H7BYH0
Length = 465
Score = 277 (102.6 bits), Expect = 2.7e-41, Sum P(2) = 2.7e-41
Identities = 69/199 (34%), Positives = 110/199 (55%)
Query: 189 VMKFGSWTYDGYTVDLKHILQGPDSDKID-IGIDLQDYYLSVEWDIMKVPA-VRNEKFYS 246
V++ S TY +DL+ L D I+ I ID + + + EW I PA + +
Sbjct: 113 VLENKSQTYSTNEIDLQ--LSQEDGQTIEWIFIDPEAFTENGEWAIQHRPAKMLLDPAAP 170
Query: 247 CCEEPYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSG-EKVSLCXXXXX 305
E + ++F + ++RK LFY +N+I PCV IS +++L+ +LP+ +G +K ++
Sbjct: 171 AQEAGHQKVVFYLLIQRKPLFYVINIIAPCVLISSVAILIHFLPAKAGGQKCTVAINVLL 230
Query: 306 XXXXXXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPW 365
A+ +P TS VPL+ KYL F +++ L VV + VLNV+ RSP TH M
Sbjct: 231 AQTVFLFLVAKKVPETSQAVPLISKYLTFLLVVTILIVVNAVVVLNVSLRSPHTHSMARG 290
Query: 366 VHKVFIEVLPKILFIQ-RP 383
V KVF+ +LP++L + RP
Sbjct: 291 VRKVFLRLLPQLLRMHVRP 309
Score = 227 (85.0 bits), Expect = 2.7e-41, Sum P(2) = 2.7e-41
Identities = 51/150 (34%), Positives = 80/150 (53%)
Query: 17 PSLTFLVFSVII-AQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVN 75
P L L+ +V + AQG ++ +RL DL+ NY+ +RP +SD + V + L L+ LI +N
Sbjct: 7 PLLLLLLLAVCLGAQGRNQEERLLADLMQNYDPNLRPAERDSDVVNVSLKLTLTNLISLN 66
Query: 76 LKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPD 135
+ + +TTNVW+ +W DY+L+W P +Y G+ L VPS +W PD
Sbjct: 67 EREEALTTNVWIEM---------------QWCDYRLRWDPRDYEGLWVLRVPSTMVWRPD 111
Query: 136 IVLYNNADGNYEVTIMTKAILHYDGKVV-W 164
IVL N + Y + + DG+ + W
Sbjct: 112 IVLENKSQ-TYSTNEIDLQLSQEDGQTIEW 140
>UNIPROTKB|D4A7Y5 [details] [associations]
symbol:Chrng "Acetylcholine receptor subunit gamma"
species:10116 "Rattus norvegicus" [GO:0004889
"acetylcholine-activated cation-selective channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00254 RGD:2354 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0004889 IPI:IPI00561094
ProteinModelPortal:D4A7Y5 Ensembl:ENSRNOT00000049268
ArrayExpress:D4A7Y5 Uniprot:D4A7Y5
Length = 467
Score = 282 (104.3 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 67/188 (35%), Positives = 107/188 (56%)
Query: 194 SWTYDGYTVDLKHILQGPDSDKID-IGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEP- 251
S TY ++L+ L D I+ I ID + + + EW I PA + EE
Sbjct: 118 SQTYSTSEINLQ--LSQEDGQAIEWIFIDPEAFTENGEWAIRHRPAKMLLDPVTPAEEAG 175
Query: 252 YPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSG-EKVSLCXXXXXXXXXX 310
+ ++F + ++RK LFY +N+I+PCV IS +++L+++LP+ +G +K ++
Sbjct: 176 HQKVVFYLLIQRKPLFYVINIIVPCVLISSVAILIYFLPAKAGGQKCTVATNVLLAQTVF 235
Query: 311 XXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVF 370
A+ +P TS VPL+ KYL F M++ L VV ++ VLNV+ RSP TH M V KVF
Sbjct: 236 LFLVAKKVPETSQAVPLISKYLTFLMVVTILIVVNSVVVLNVSLRSPHTHSMARGVRKVF 295
Query: 371 IEVLPKIL 378
+ +LP++L
Sbjct: 296 LRLLPQLL 303
Score = 215 (80.7 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 48/150 (32%), Positives = 80/150 (53%)
Query: 17 PSLTFLVFSVII-AQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVN 75
P L L+ + + A+ ++ +RL DL+ NY+ +RP +SD + V + L L+ LI +N
Sbjct: 7 PQLLLLLLATCLGARSRNQEERLLADLMRNYDPHLRPAERDSDVVNVSLKLTLTNLISLN 66
Query: 76 LKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPD 135
+ + +TTNVW+ +W DY+L+W P++Y G+ L VPS +W PD
Sbjct: 67 EREEALTTNVWIEM---------------QWCDYRLRWDPKDYEGLWILRVPSTMVWQPD 111
Query: 136 IVLYNNADGNYEVTIMTKAILHYDGKVV-W 164
IVL N + Y + + + DG+ + W
Sbjct: 112 IVLGNKSQ-TYSTSEINLQLSQEDGQAIEW 140
>WB|WBGene00000955 [details] [associations]
symbol:des-2 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=IDA] InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PROSITE:PS00236
GO:GO:0005887 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 KO:K05312
EMBL:Z74039 EMBL:Z74044 UniGene:Cel.19736 GeneID:179574
KEGG:cel:CELE_T26H10.1 CTD:179574 RefSeq:NP_001256321.1
ProteinModelPortal:H9G2Y4 SMR:H9G2Y4 WormBase:T26H10.1b
Uniprot:H9G2Y4
Length = 559
Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 113/348 (32%), Positives = 173/348 (49%)
Query: 37 RLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIM 96
RL DLL NY++ +P+ +NS + V + L Q++E+N + Q Q +
Sbjct: 28 RLVHDLLDNYDKKAKPMWDNSKPINVSFSMDLYQILELN-EPQ--------------QYI 72
Query: 97 TTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTK 153
N W+ + W D L W+P++Y + L +P + IWLPD LYN+ D + + +K
Sbjct: 73 LLNAWIIERWFDEFLYWNPDDYENITELRLPYDSIWLPDTTLYNSLVMKDDDTRRLLNSK 132
Query: 154 AIL--HYDGKVV-WNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQG 210
H ++ P IYK C +D+ +FPFDVQ C M F SWTYD +D
Sbjct: 133 LTTDTHRRAALIELLYPTIYKFSCLLDLRFFPFDVQVCTMTFSSWTYDQKGIDYF----- 187
Query: 211 PDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTV 270
P SDKI +Y + W I++ R E Y+CC Y + + LRRK LFY V
Sbjct: 188 PYSDKIGTS----NYLENEGWYILQTKIKRQEVKYACCPNNYTLLQLTLYLRRKPLFYLV 243
Query: 271 NLIIPCVGISFLSVLVFYLPSD-SG---EKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVP 326
NLIIP I+ ++++ F+ S SG EKVSL ++ +P TS +P
Sbjct: 244 NLIIPTSIITLIAIVGFFTTSSASGMREEKVSLGITTLLSMSILMLMVSDQMPTTSTFIP 303
Query: 327 LLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVL 374
L+G ++L +I+++L VV+ ++ + R + M K F +VL
Sbjct: 304 LIGWFILAMIIVISLGTVVSSVIIAIQKRGSLGERMSKRALK-FAKVL 350
>UNIPROTKB|I3L8N6 [details] [associations]
symbol:LOC100626974 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] InterPro:IPR002394 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00254
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0004889
GeneTree:ENSGT00630000089708 Ensembl:ENSSSCT00000028323
Uniprot:I3L8N6
Length = 448
Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 84/195 (43%), Positives = 118/195 (60%)
Query: 17 PSLTFLVF--SVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEV 74
P+L L+ S + G++ RL L +YN ++RPV ++ + V +GL+L QLI V
Sbjct: 4 PALLLLLSLCSAGLVLGSEHETRLVAKLFEDYNSVVRPVEDHRQAVEVTVGLQLIQLINV 63
Query: 75 NLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLP 134
+ NQI+TTNV LK Q+W DY LKW+P++YGGV +H+PSE IW P
Sbjct: 64 DEVNQIVTTNV----RLK-----------QQWVDYNLKWNPDDYGGVKKIHIPSEKIWHP 108
Query: 135 DIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGS 194
D VLYNNADG++ + TK +L Y G + W PPAI+KS+CEI V +FPFD Q C MK +
Sbjct: 109 DFVLYNNADGDFAIVKFTKVLLDYTGHITWTPPAIFKSYCEIIVTHFPFDEQNCSMKVVA 168
Query: 195 WTYDGYTVDLKHILQ 209
+ DL + ++
Sbjct: 169 INPESDQPDLSNFME 183
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 99/287 (34%), Positives = 157/287 (54%)
Query: 116 EEYGGVDTLHVPSEHIWLPDIVLYNNAD--GNYEVTIMTKAILHYDGKVVWNPP----AI 169
+E + T +V + W+ + +N D G ++ I ++ I H D V++N AI
Sbjct: 64 DEVNQIVTTNVRLKQQWVDYNLKWNPDDYGGVKKIHIPSEKIWHPDF-VLYNNADGDFAI 122
Query: 170 YKSFCEIDVEYFPFDVQT--------CVMKFGSWTYDGYTVDLKHILQGPDSDKIDIGID 221
K F ++ ++Y T C + + +D +K + P+SD+ D
Sbjct: 123 VK-FTKVLLDYTGHITWTPPAIFKSYCEIIVTHFPFDEQNCSMKVVAINPESDQPD---- 177
Query: 222 LQDYYLSVEWDIMKVPAVRNEKFYSCCEE-PYPDIIFNITLRRKTLFYTVNLIIPCVGIS 280
L ++ S EW I + ++ Y+CC PY DI ++ ++R L++ VN+IIPC+ S
Sbjct: 178 LSNFMESGEWVIKEARGWKHRVLYACCPSTPYLDITYHFVMQRLPLYFIVNVIIPCLLFS 237
Query: 281 FLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLFTMILVT 340
FL+ LVFYLP+DSGEK++L E+IP TS VPL+GKY+LFTM+ V
Sbjct: 238 FLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLFTMVFVI 297
Query: 341 LSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILF---IQRPA 384
S+++T+ V+N + RSP THVM WV KVFI+ +P I+F ++RP+
Sbjct: 298 ASIIITVIVINTHHRSPSTHVMPEWVRKVFIDTIPNIMFFSTMKRPS 344
Score = 160 (61.4 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 25/43 (58%), Positives = 32/43 (74%)
Query: 513 TPINFLQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
T + Q+W DY LKW+P++YGGV +H+PSE IW PD VLYN
Sbjct: 72 TNVRLKQQWVDYNLKWNPDDYGGVKKIHIPSEKIWHPDFVLYN 114
>WB|WBGene00000951 [details] [associations]
symbol:deg-3 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0043067 "regulation of
programmed cell death" evidence=IMP] InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GeneTree:ENSGT00570000078866 KO:K05312 EMBL:U19747
EMBL:U19746 EMBL:Z74039 PIR:T23269 RefSeq:NP_505897.1
UniGene:Cel.34237 ProteinModelPortal:P54244 SMR:P54244
STRING:P54244 PaxDb:P54244 EnsemblMetazoa:K03B8.9.1
EnsemblMetazoa:K03B8.9.2 GeneID:3565200 KEGG:cel:CELE_K03B8.9
UCSC:K03B8.9.2 CTD:3565200 WormBase:K03B8.9 eggNOG:NOG256681
HOGENOM:HOG000019549 InParanoid:P54244 OMA:TERYMNI NextBio:955575
GO:GO:0043067 Uniprot:P54244
Length = 564
Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 104/370 (28%), Positives = 181/370 (48%)
Query: 28 IAQGNDEAKRLYDDLLS--NYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNV 85
IA N RL LLS Y+ +RP+ ++ L V + + L Q+IEV+ +Q
Sbjct: 44 IAMKNVPLVRLTRHLLSPERYDVRVRPILDHKKSLKVHISISLYQIIEVDEPSQ------ 97
Query: 86 WVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGN 145
N+K NVW+ Q+W D L W+P EYG +++ +P H+W+PD LYN+ +
Sbjct: 98 ----NIK-----LNVWMIQKWRDEYLDWNPNEYGMINSTIIPFHHLWIPDTYLYNSVKMS 148
Query: 146 YEVT---IMTKAILHY-----DGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTY 197
+ T + +A +Y ++ + PAIY C +++ +FP+D Q C + SWT
Sbjct: 149 RDETERYMNIQATSNYWKGEKGAELSFLYPAIYTITCRLNIRFFPYDRQNCTLTISSWTN 208
Query: 198 DGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIF 257
+D D + +Q + + EW + R+E Y+CC EP+ +
Sbjct: 209 SKSALDYY----------ADTEVSMQSFIPNEEWQVKSFKIHRHEYKYACCAEPWVILQA 258
Query: 258 NITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPS----DSGEKVSLCXXXXXXXXXXXXX 313
++ ++RK L+Y VNLIIP I+ +++ F+ P+ D EK++L
Sbjct: 259 SLVIQRKPLYYLVNLIIPTSIITLVAITGFFTPASTDDDRTEKINLGITTLLAMSILMLM 318
Query: 314 XAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEV 373
++ +P TS VPL+ + L +I++++ +T VL+V R ++ +F +
Sbjct: 319 VSDQMPTTSEFVPLIAWFYLSIIIIISIGTFLTSVVLSVQGRRQYGRNPPQFIRYIFFVL 378
Query: 374 LPKILFIQRP 383
LP++L + P
Sbjct: 379 LPQVLLLNVP 388
>UNIPROTKB|I3LTU2 [details] [associations]
symbol:HTR3A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008132 InterPro:IPR008133 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR01708
PRINTS:PR01709 PROSITE:PS00236 GO:GO:0016021 GO:GO:0045211
GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 OMA:GKSPNIP
GeneTree:ENSGT00570000078866 EMBL:FP312770
Ensembl:ENSSSCT00000025422 Uniprot:I3LTU2
Length = 489
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 80/287 (27%), Positives = 152/287 (52%)
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
KNQ++TT +W Q W D L+W+PE++ + L +P++ IW+PDI++ D I
Sbjct: 87 KNQVLTTYIWYRQYWTDEFLQWNPEDFDNITKLSLPTDSIWVPDILINEFVDVGKSPNIP 146
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
+ H+ G+V P + C +D+ FPFDVQ C + F SW + +++ +L+ P
Sbjct: 147 YVYVRHH-GEVQNYKPLQVVTACSLDIYNFPFDVQNCSLTFTSWLHTIQDINIS-LLRLP 204
Query: 212 DSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVN 271
++ K D + + EW+++ V + ++F Y ++ F + +RR+ LFY V+
Sbjct: 205 ENVKFDRSVFMNQG----EWELLGV-LTQFQEFSIESSSSYAEMKFYVVIRRRPLFYAVS 259
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
L++P + + + ++ FYLP DSGE+VS ++ +P T++ PL+G Y
Sbjct: 260 LLLPSIFLMVMDIVGFYLPPDSGERVSFKITLLLGYSVFLIIVSDTLPATAIGTPLIGVY 319
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKIL 378
+ M L+ +S+ TI ++ + + + + W+ + +E + +L
Sbjct: 320 FVVCMALLVISLAETIFIVRLVHKQDLQQPVPAWLRHLVLERVALLL 366
Score = 227 (85.0 bits), Expect = 7.8e-16, P = 7.8e-16
Identities = 58/198 (29%), Positives = 99/198 (50%)
Query: 8 RTAAMHVLFPSLTFLVFSVIIAQGNDEAK--------RLYDDLLSNYNRLIRPVGNNSDK 59
R A + +L P FL ++ +G+ +A+ RL + LL+NY + +RPV +
Sbjct: 12 RQALLALLLPM--FLAQGEVMHRGDPQARNTSRPAMLRLSNHLLANYKKGVRPVRDWRTP 69
Query: 60 LTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYG 119
TV + + + ++ V+ KNQ++TT +W Q W D L+W+PE++
Sbjct: 70 TTVSIDVIVYAILSVDEKNQVLTTYIWYRQY---------------WTDEFLQWNPEDFD 114
Query: 120 GVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVE 179
+ L +P++ IW+PDI++ D I + H+ G+V P + C +D+
Sbjct: 115 NITKLSLPTDSIWVPDILINEFVDVGKSPNIPYVYVRHH-GEVQNYKPLQVVTACSLDIY 173
Query: 180 YFPFDVQTCVMKFGSWTY 197
FPFDVQ C + F SW +
Sbjct: 174 NFPFDVQNCSLTFTSWLH 191
>RGD|61818 [details] [associations]
symbol:Htr3a "5-hydroxytryptamine (serotonin) receptor 3A,
ionotropic" species:10116 "Rattus norvegicus" [GO:0004993 "serotonin
receptor activity" evidence=ISO] [GO:0005232 "serotonin-activated
cation-selective channel activity" evidence=IDA] [GO:0005249
"voltage-gated potassium channel activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0007210 "serotonin receptor signaling pathway"
evidence=ISO] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030424 "axon"
evidence=IDA] [GO:0042220 "response to cocaine" evidence=IEP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0045471 "response to
ethanol" evidence=IEP] [GO:0051378 "serotonin binding" evidence=ISO]
[GO:0071363 "cellular response to growth factor stimulus"
evidence=IEP] InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008132 InterPro:IPR008133
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR01708 PRINTS:PR01709 PROSITE:PS00236 RGD:61818
GO:GO:0005737 GO:GO:0005887 GO:GO:0071363 GO:GO:0042220
GO:GO:0007268 CTD:3359 eggNOG:NOG302526 HOGENOM:HOG000241519
HOVERGEN:HBG106638 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
KO:K04819 OMA:GKSPNIP GO:GO:0005232 OrthoDB:EOG4Z62NF EMBL:D49395
EMBL:U01227 IPI:IPI00388902 PIR:I58179 RefSeq:NP_077370.2
UniGene:Rn.55109 ProteinModelPortal:P35563 STRING:P35563
TCDB:1.A.9.2.2 PhosphoSite:P35563 Ensembl:ENSRNOT00000008965
GeneID:79246 KEGG:rno:79246 UCSC:RGD:61818
GeneTree:ENSGT00570000078866 InParanoid:P35563 BindingDB:P35563
ChEMBL:CHEMBL2411 NextBio:614706 ArrayExpress:P35563
Genevestigator:P35563 GermOnline:ENSRNOG00000006595 GO:GO:0030424
GO:GO:0043025 GO:GO:0005249 Uniprot:P35563
Length = 483
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 98/377 (25%), Positives = 188/377 (49%)
Query: 12 MHVLFPSLTFLVF-SVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTV--KMGLK- 67
M + P + +F SV+IAQG +R + L+R SD L K G++
Sbjct: 1 MPLCIPQVLLALFLSVLIAQGEGSRRRATQAHSTTQPALLRL----SDHLLANYKKGVRP 56
Query: 68 LSQLIEVNLKNQIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVP 127
+ + L + + +N + KNQ++TT +W Q W D L+W+PE++ V L +P
Sbjct: 57 VRDWRKPTLVSIDVIMYAILNVDEKNQVLTTYIWYRQFWTDEFLQWTPEDFDNVTKLSIP 116
Query: 128 SEHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQT 187
++ IW+PDI++ D +I +H+ G+V P + C +D+ FPFDVQ
Sbjct: 117 TDSIWVPDILINEFVDVGKSPSI-PYVYVHHQGEVQNYKPLQLVTACSLDIYNFPFDVQN 175
Query: 188 CVMKFGSWTYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSC 247
C + F SW + +++ + + P+ + D I + EW+++ V + ++F
Sbjct: 176 CSLTFTSWLHTIQDINIS-LWRTPEEVRSDKSIFINQG----EWELLGV-FTKFQEFSIE 229
Query: 248 CEEPYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXX 307
Y ++ F + +RR+ LFY V+L++P + + + ++ F LP DSGE+VS
Sbjct: 230 TSNSYAEMKFYVVIRRRPLFYAVSLLLPSIFLMVVDIVGFCLPPDSGERVSFKITLLLGY 289
Query: 308 XXXXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVH 367
++ +P T++ PL+G Y + M L+ +S+ TI ++ + + + + W+
Sbjct: 290 SVFLIIVSDTLPATAIGTPLIGVYFVVCMALLVISLAETIFIVQLVHKQDLQRPVPDWLR 349
Query: 368 KVFIEVLPKILFI-QRP 383
+ ++ + +L + ++P
Sbjct: 350 HLVLDRIAWLLCLGEQP 366
>UNIPROTKB|F1N4Y2 [details] [associations]
symbol:HTR3A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008132 InterPro:IPR008133 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR01708
PRINTS:PR01709 PROSITE:PS00236 GO:GO:0016021 CTD:3359 GO:GO:0045211
GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 KO:K04819 OMA:GKSPNIP
GeneTree:ENSGT00570000078866 EMBL:DAAA02040317 IPI:IPI00685680
RefSeq:NP_001180098.1 UniGene:Bt.106425 Ensembl:ENSBTAT00000014292
GeneID:617674 KEGG:bta:617674 BindingDB:F1N4Y2 NextBio:20900785
Uniprot:F1N4Y2
Length = 484
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 78/287 (27%), Positives = 150/287 (52%)
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
KNQ++TT +W Q W D L+W PE++ + L +P++ IW+PDI++ D I
Sbjct: 82 KNQVLTTYIWYRQYWTDEFLQWDPEDFDNITKLSIPTDSIWVPDILINEFVDVGKSPNIP 141
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
+ H+ G+V P + C +D+ FPFD+Q C + F SW + +++ + + P
Sbjct: 142 YVYVRHH-GEVQNYKPLQVMTACTLDIYNFPFDIQNCSLTFTSWLHTIQDINIS-LWRLP 199
Query: 212 DSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVN 271
+ K D + + EW+++ V + ++F + Y ++ F + +RR+ LFY V+
Sbjct: 200 EKVKFDRSVFMNQG----EWELLGV-LTQFQEFSIESSDSYAEMKFYVVIRRRPLFYAVS 254
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
L++P + + + ++ FYLP DSGE+VS ++ +P T++ PL+G Y
Sbjct: 255 LLLPSIFLMVVDIVGFYLPPDSGERVSFKITLLLGYSVFLIIVSDTLPATAIGTPLIGVY 314
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKIL 378
+ M L+ +S+ TI ++ + + + + W+ + +E + +L
Sbjct: 315 FVVCMALLVISLAETILIVRLVHKQDLQQPVPAWLRHLVLERVTLLL 361
Score = 226 (84.6 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 50/161 (31%), Positives = 82/161 (50%)
Query: 37 RLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIM 96
RL D LL+NY + +RPV + TV + + + ++ V+ KNQ++TT +W Q
Sbjct: 42 RLSDHLLANYKKGVRPVRDWRTPTTVSIDVIVYAILSVDEKNQVLTTYIWYRQY------ 95
Query: 97 TTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAIL 156
W D L+W PE++ + L +P++ IW+PDI++ D I +
Sbjct: 96 ---------WTDEFLQWDPEDFDNITKLSIPTDSIWVPDILINEFVDVGKSPNIPYVYVR 146
Query: 157 HYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTY 197
H+ G+V P + C +D+ FPFD+Q C + F SW +
Sbjct: 147 HH-GEVQNYKPLQVMTACTLDIYNFPFDIQNCSLTFTSWLH 186
>UNIPROTKB|F1NGS5 [details] [associations]
symbol:HTR3A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008132 InterPro:IPR008133 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR01708
PRINTS:PR01709 PROSITE:PS00236 GO:GO:0016021 GO:GO:0045211
GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 OMA:GKSPNIP
GeneTree:ENSGT00570000078866 EMBL:AADN02041811 IPI:IPI00592020
Ensembl:ENSGALT00000011338 Uniprot:F1NGS5
Length = 471
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 80/289 (27%), Positives = 151/289 (52%)
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
KNQ++TT +W Q W D L+W P + + + +P+E IW+PDI++ D +
Sbjct: 65 KNQVLTTYIWYRQHWTDEFLQWDPAHFDNITQISLPAESIWVPDILINEFVDVGKSPDVP 124
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
+ H+ G+V P + C +D+ FPFDVQ C + F SW ++ + ++L + + P
Sbjct: 125 YVYVRHH-GEVQNLKPIQVVTACSLDIYNFPFDVQNCSLTFTSWLHNIHDINLS-LWRQP 182
Query: 212 DSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVN 271
+ K D + + EW+++ V + ++F + Y ++ F + +RR+ LFYT+N
Sbjct: 183 ELVKFDRSVFMNQG----EWELLYVLS-HFQEFSVKSSDSYAEMKFYVVIRRRPLFYTIN 237
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
L++P + + + ++ FYLP +SGE+VS ++ +P T++ PL+G Y
Sbjct: 238 LLLPSIFLMVMDIVGFYLPPNSGERVSFKITLLLGYSVFLIIVSDTLPATAVGTPLIGIY 297
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFI 380
+ M L+ +S+ TI ++ + + + + WV + +E +L I
Sbjct: 298 FVVCMALLVISLTETIFIVRLVHKQDLQPHVPSWVKHLLLERATALLCI 346
Score = 223 (83.6 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 50/168 (29%), Positives = 86/168 (51%)
Query: 37 RLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIM 96
RL D LL++Y R +RPV + TV + + + ++ V+ KNQ++TT +W Q+
Sbjct: 25 RLSDTLLAHYRRGVRPVRDWRTTTTVAIDVMVYAILSVDEKNQVLTTYIWYRQH------ 78
Query: 97 TTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAIL 156
W D L+W P + + + +P+E IW+PDI++ D + +
Sbjct: 79 ---------WTDEFLQWDPAHFDNITQISLPAESIWVPDILINEFVDVGKSPDVPYVYVR 129
Query: 157 HYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
H+ G+V P + C +D+ FPFDVQ C + F SW ++ + ++L
Sbjct: 130 HH-GEVQNLKPIQVVTACSLDIYNFPFDVQNCSLTFTSWLHNIHDINL 176
>MGI|MGI:96282 [details] [associations]
symbol:Htr3a "5-hydroxytryptamine (serotonin) receptor 3A"
species:10090 "Mus musculus" [GO:0004993 "serotonin receptor
activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005232 "serotonin-activated
cation-selective channel activity" evidence=ISO] [GO:0005249
"voltage-gated potassium channel activity" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0007210 "serotonin receptor
signaling pathway" evidence=ISO] [GO:0015276 "ligand-gated ion
channel activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030424 "axon"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0051378 "serotonin binding"
evidence=ISO] InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008132 InterPro:IPR008133
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR01708 PRINTS:PR01709 PROSITE:PS00236 MGI:MGI:96282
GO:GO:0016021 GO:GO:0005886 GO:GO:0004993 GO:GO:0051378 CTD:3359
eggNOG:NOG302526 HOGENOM:HOG000241519 HOVERGEN:HBG106638
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 KO:K04819 EMBL:M74425 EMBL:Z22772 EMBL:Z22773
EMBL:X72395 EMBL:X79283 IPI:IPI00222698 IPI:IPI00229388 PIR:S41757
RefSeq:NP_038589.2 UniGene:Mm.4831 ProteinModelPortal:P23979
SMR:P23979 DIP:DIP-48769N STRING:P23979 PhosphoSite:P23979
PRIDE:P23979 GeneID:15561 KEGG:mmu:15561 InParanoid:P23979
OrthoDB:EOG4Z62NF BindingDB:P23979 ChEMBL:CHEMBL4972 NextBio:288512
CleanEx:MM_HTR3A Genevestigator:P23979
GermOnline:ENSMUSG00000032269 Uniprot:P23979
Length = 487
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 98/349 (28%), Positives = 178/349 (51%)
Query: 37 RLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIM 96
RL D LL+NY + +RPV + TV I+V IM + V++ KNQ++
Sbjct: 40 RLSDHLLANYKKGVRPVRDWRKPTTVS--------IDV-----IMYAILNVDE--KNQVL 84
Query: 97 TTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAIL 156
TT +W Q W D L+W+PE++ V L +P++ IW+PDI++ D I +
Sbjct: 85 TTYIWYRQYWTDEFLQWTPEDFDNVTKLSIPTDSIWVPDILINEFVDVGKSPNI-PYVYV 143
Query: 157 HYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSDKI 216
H+ G+V P + C +D+ FPFDVQ C + F SW + +++ + + P+ +
Sbjct: 144 HHRGEVQNYKPLQLVTACSLDIYNFPFDVQNCSLTFTSWLHTIQDINIT-LWRSPEEVRS 202
Query: 217 DIGIDLQDYYLSVEWDIMKV-PAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLIIP 275
D I + EW++++V P + +F Y ++ F + +RR+ LFY V+L++P
Sbjct: 203 DKSIFINQG----EWELLEVFPQFK--EFSIDISNSYAEMKFYVIIRRRPLFYAVSLLLP 256
Query: 276 CVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLFT 335
+ + + ++ F LP DSGE+VS ++ +P T + PL+G Y +
Sbjct: 257 SIFLMVVDIVGFCLPPDSGERVSFKITLLLGYSVFLIIVSDTLPAT-IGTPLIGVYFVVC 315
Query: 336 MILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFI-QRP 383
M L+ +S+ TI ++ + + + + W+ + ++ + IL + ++P
Sbjct: 316 MALLVISLAETIFIVRLVHKQDLQRPVPDWLRHLVLDRIAWILCLGEQP 364
>UNIPROTKB|P46098 [details] [associations]
symbol:HTR3A "5-hydroxytryptamine receptor 3A" species:9606
"Homo sapiens" [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004993
"serotonin receptor activity" evidence=IDA;NAS] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=NAS]
[GO:0016021 "integral to membrane" evidence=NAS] [GO:0006810
"transport" evidence=NAS] [GO:0004872 "receptor activity"
evidence=TAS] [GO:0005232 "serotonin-activated cation-selective
channel activity" evidence=TAS] [GO:0005887 "integral to plasma
membrane" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0007586 "digestion" evidence=TAS] [GO:0051378
"serotonin binding" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0034220 "ion transmembrane transport"
evidence=TAS] [GO:0055085 "transmembrane transport" evidence=TAS]
[GO:0007210 "serotonin receptor signaling pathway"
evidence=IDA;NAS] Reactome:REACT_15518 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008132
InterPro:IPR008133 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR01708 PRINTS:PR01709 PROSITE:PS00236
GO:GO:0005887 EMBL:CH471065 GO:GO:0004993 DrugBank:DB00370
GO:GO:0051378 GO:GO:0007268 DrugBank:DB00604 CTD:3359
eggNOG:NOG302526 HOGENOM:HOG000241519 HOVERGEN:HBG106638
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 EMBL:D49394
EMBL:S82612 EMBL:AJ003078 EMBL:AJ003079 EMBL:AJ005205 EMBL:AF498984
EMBL:BT007204 EMBL:CD014118 EMBL:AK299973 EMBL:AP000908
EMBL:BC002354 EMBL:BC004453 IPI:IPI00179555 IPI:IPI00465351
IPI:IPI00748737 RefSeq:NP_000860.2 RefSeq:NP_001155244.1
RefSeq:NP_998786.2 UniGene:Hs.413899 ProteinModelPortal:P46098
SMR:P46098 STRING:P46098 TCDB:1.A.9.2.1 PhosphoSite:P46098
DMDM:1168222 PRIDE:P46098 DNASU:3359 Ensembl:ENST00000299961
Ensembl:ENST00000355556 Ensembl:ENST00000375498
Ensembl:ENST00000504030 Ensembl:ENST00000506841 GeneID:3359
KEGG:hsa:3359 UCSC:uc010rxb.2 GeneCards:GC11P113879 HGNC:HGNC:5297
MIM:182139 neXtProt:NX_P46098 PharmGKB:PA29555 KO:K04819
OMA:GKSPNIP BindingDB:P46098 ChEMBL:CHEMBL1899 DrugBank:DB00969
DrugBank:DB01161 DrugBank:DB00757 DrugBank:DB00889 DrugBank:DB00904
DrugBank:DB00377 DrugBank:DB00721 DrugBank:DB01199 GenomeRNAi:3359
NextBio:13282 ArrayExpress:P46098 Bgee:P46098 CleanEx:HS_HTR3A
Genevestigator:P46098 GermOnline:ENSG00000166736 GO:GO:0005232
GO:GO:0007586 Uniprot:P46098
Length = 478
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 82/296 (27%), Positives = 153/296 (51%)
Query: 87 VNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNY 146
+N + KNQ++TT +W Q W D L+W+PE++ + L +P++ IW+PDI++ D
Sbjct: 71 LNVDEKNQVLTTYIWYRQYWTDEFLQWNPEDFDNITKLSIPTDSIWVPDILINEFVDVGK 130
Query: 147 EVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKH 206
I I H G+V P + C +D+ FPFDVQ C + F SW + +++
Sbjct: 131 SPNIPYVYIRH-QGEVQNYKPLQVVTACSLDIYNFPFDVQNCSLTFTSWLHTIQDINIS- 188
Query: 207 ILQGPDSDKIDIGIDLQDYYLSVEWDIMKV-PAVRNEKFYSCCEEPYPDIIFNITLRRKT 265
+ + P+ K D + + EW+++ V P R S Y ++ F + +RR+
Sbjct: 189 LWRLPEKVKSDRSVFMNQG----EWELLGVLPYFREFSMES--SNYYAEMKFYVVIRRRP 242
Query: 266 LFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTV 325
LFY V+L++P + + + ++ FYLP +SGE+VS ++ +P T++
Sbjct: 243 LFYVVSLLLPSIFLMVMDIVGFYLPPNSGERVSFKITLLLGYSVFLIIVSDTLPATAIGT 302
Query: 326 PLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQ 381
PL+G Y + M L+ +S+ TI ++ + + + + W+ + +E + +L ++
Sbjct: 303 PLIGVYFVVCMALLVISLAETIFIVRLVHKQDLQQPVPAWLRHLVLERIAWLLCLR 358
Score = 227 (85.0 bits), Expect = 7.3e-16, P = 7.3e-16
Identities = 56/181 (30%), Positives = 89/181 (49%)
Query: 37 RLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIM 96
RL D LL+NY + +RPV + TV + + + ++ V+ KNQ++TT +W Q
Sbjct: 36 RLSDYLLTNYRKGVRPVRDWRKPTTVSIDVIVYAILNVDEKNQVLTTYIWYRQY------ 89
Query: 97 TTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAIL 156
W D L+W+PE++ + L +P++ IW+PDI++ D I I
Sbjct: 90 ---------WTDEFLQWNPEDFDNITKLSIPTDSIWVPDILINEFVDVGKSPNIPYVYIR 140
Query: 157 HYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSW--TYDGYTVDLKHILQGPDSD 214
H G+V P + C +D+ FPFDVQ C + F SW T + L + + SD
Sbjct: 141 H-QGEVQNYKPLQVVTACSLDIYNFPFDVQNCSLTFTSWLHTIQDINISLWRLPEKVKSD 199
Query: 215 K 215
+
Sbjct: 200 R 200
>UNIPROTKB|F1PXW4 [details] [associations]
symbol:HTR3A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008132 InterPro:IPR008133 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR01708
PRINTS:PR01709 PROSITE:PS00236 GO:GO:0016021 GO:GO:0045211
GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 OMA:GKSPNIP
GeneTree:ENSGT00570000078866 EMBL:AAEX03003482 EMBL:AAEX03003480
EMBL:AAEX03003481 Ensembl:ENSCAFT00000021510 Uniprot:F1PXW4
Length = 508
Score = 367 (134.2 bits), Expect = 2.6e-35, Sum P(2) = 2.6e-35
Identities = 86/294 (29%), Positives = 153/294 (52%)
Query: 37 RLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQIM 96
RL + LL+NY + +RPV + TV + + + ++ V+ KNQ++TT +W Q
Sbjct: 36 RLSNYLLANYQKGVRPVRDWRKPTTVSIDVIVYAILSVDEKNQVLTTYIWYRQY------ 89
Query: 97 TTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAIL 156
W D L+W+PE++ + L +P+E IW+PDI++ D +I +
Sbjct: 90 ---------WTDEFLQWNPEDFDNITKLSIPTESIWVPDILINEFVDVGKSPSIPYVYVG 140
Query: 157 HYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSDKI 216
H+ G+V P + C +D+ FPFDVQ C + F SW + +++ +L+ P+ K+
Sbjct: 141 HH-GEVQNYKPLQVVTACSLDIYNFPFDVQNCSLTFTSWLHTIQDINIS-LLRLPEKVKL 198
Query: 217 DIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLIIPC 276
D I + EW+++ V + ++F Y +I + +RR+ LFYTV+L++P
Sbjct: 199 DKTIFMNQG----EWELLGV-LTQFQEFSMESNSCYAEIKCYVVIRRRPLFYTVSLLLPS 253
Query: 277 VGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGK 330
+ + + ++ FYLP DSGE+VS ++ +P T++ PL+G+
Sbjct: 254 IFLMLMDIVGFYLPPDSGERVSFKITLLLGYSVFLIIVSDTLPATAIGTPLIGR 307
Score = 49 (22.3 bits), Expect = 2.6e-35, Sum P(2) = 2.6e-35
Identities = 10/50 (20%), Positives = 25/50 (50%)
Query: 329 GKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKIL 378
G Y + M L+ +S+ TI ++ + + + + W+ + +E + +L
Sbjct: 336 GVYFVVCMALLVMSLAETIFIVRLVHKQDLQQPVPAWLRHLVLERVALLL 385
>UNIPROTKB|E9PP97 [details] [associations]
symbol:CHRNA6 "Neuronal acetylcholine receptor subunit
alpha-6" species:9606 "Homo sapiens" [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0004889 "acetylcholine-activated cation-selective channel
activity" evidence=IEA] [GO:0005892 "acetylcholine-gated channel
complex" evidence=IEA] [GO:0014059 "regulation of dopamine
secretion" evidence=IEA] [GO:0051899 "membrane depolarization"
evidence=IEA] InterPro:IPR002394 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 PRINTS:PR00252
PRINTS:PR00254 PROSITE:PS00236 GO:GO:0014059 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF63712
GO:GO:0004889 GO:GO:0005892 GO:GO:0051899 EMBL:AC087533
HGNC:HGNC:15963 IPI:IPI00981021 ProteinModelPortal:E9PP97
SMR:E9PP97 Ensembl:ENST00000533810 ArrayExpress:E9PP97 Bgee:E9PP97
Uniprot:E9PP97
Length = 111
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 62/109 (56%), Positives = 81/109 (74%)
Query: 96 MTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAI 155
M TN+W+ W DYKL+W P EY G++TL VP++ IW PDIVLYNNA G+++V TKA+
Sbjct: 1 METNLWLRHIWNDYKLRWDPMEYDGIETLRVPADKIWKPDIVLYNNAVGDFQVEGKTKAL 60
Query: 156 LHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDL 204
L Y+G + W PPAI+KS C +D+ +FPFD Q C +KFGSWTYD +DL
Sbjct: 61 LKYNGMITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWTYDKAEIDL 109
Score = 146 (56.5 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 23/35 (65%), Positives = 28/35 (80%)
Query: 521 WEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYN 555
W DYKL+W P EY G++TL VP++ IW PDIVLYN
Sbjct: 11 WNDYKLRWDPMEYDGIETLRVPADKIWKPDIVLYN 45
>WB|WBGene00020048 [details] [associations]
symbol:lgc-12 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PROSITE:PS00236
GO:GO:0016021 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
GeneTree:ENSGT00570000078866 EMBL:FO080424 RefSeq:NP_498656.3
ProteinModelPortal:Q95Y94 SMR:Q95Y94 DIP:DIP-26996N
MINT:MINT-1102799 EnsemblMetazoa:R13A5.4 GeneID:187855
KEGG:cel:CELE_R13A5.4 UCSC:R13A5.4 CTD:187855 WormBase:R13A5.4
eggNOG:NOG320642 HOGENOM:HOG000018800 InParanoid:Q95Y94 OMA:LIIFAHE
NextBio:936730 Uniprot:Q95Y94
Length = 428
Score = 355 (130.0 bits), Expect = 7.7e-35, Sum P(2) = 7.7e-35
Identities = 96/355 (27%), Positives = 166/355 (46%)
Query: 24 FSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTT 83
F++ I + L L+ +Y + RPV N S LTV + ++ L+EVN +N+
Sbjct: 18 FTIEIEYPEINERELVKHLMKDYYQFTRPVKNYSSMLTVTIMPQIYNLVEVNEQNE---- 73
Query: 84 NVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNAD 143
QI +W Q W+D L W P+E+ G++ + +P +WLPD ++N +
Sbjct: 74 ----------QIKLL-IWFPQSWKDDYLVWDPDEWDGIEKITIPKSMVWLPDGYIFNTVE 122
Query: 144 GNYEVTIMTKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVD 203
+ +HY+GKV + + C + V FPFDVQ C ++FGSWTY + +
Sbjct: 123 ET-DTLDNHNVRVHYNGKVEVDFNKLIDLICPMSVLSFPFDVQLCALQFGSWTYQSHALS 181
Query: 204 LKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRN-EKFYSCC--EEPYPDIIFNIT 260
++L+ + + + EWDI+ A + K+ + + Y +I + +
Sbjct: 182 F-NVLEA----------SVNENNKNSEWDIVAFNATKKVSKYMNLIGGDNVYEEIFYFLE 230
Query: 261 LRRKTLFYTVNLIIPCVGISFLSVLVFYLP----SDSGEKVSLCXXXXXXXXXXXXXXAE 316
+RRK L+Y V ++IP I +S + + P D E VSL
Sbjct: 231 VRRKPLYYIVVILIPTFLIVTVSNIGLFTPHGVHGDREEHVSLGLTTMLTMAVILDMVTG 290
Query: 317 IIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKP-WVHKVF 370
+P +S +PLLG Y+L L ++V+V++ ++ + R M P W+ ++F
Sbjct: 291 QMPKSSEGIPLLGMYVLIEFALSIMAVLVSVLIIFAHERMLYMDAMPPFWIFRLF 345
Score = 41 (19.5 bits), Expect = 7.7e-35, Sum P(2) = 7.7e-35
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 446 LPISNLEADDIMFSPTSM 463
+P++ +E DD+ SP +
Sbjct: 352 IPLAEMEYDDLRSSPVDL 369
>WB|WBGene00000059 [details] [associations]
symbol:acr-20 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PROSITE:PS00236
GO:GO:0016021 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
GeneTree:ENSGT00570000078866 HOGENOM:HOG000019549 EMBL:Z83120
RefSeq:NP_001122627.1 ProteinModelPortal:B1Q281 SMR:B1Q281
EnsemblMetazoa:R06A4.10c GeneID:187632 KEGG:cel:CELE_R06A4.10
UCSC:R06A4.10a CTD:187632 WormBase:R06A4.10c eggNOG:NOG297360
InParanoid:B1Q281 OMA:CIENEGW NextBio:935932 ArrayExpress:B1Q281
Uniprot:B1Q281
Length = 556
Score = 378 (138.1 bits), Expect = 1.3e-33, P = 1.3e-33
Identities = 94/341 (27%), Positives = 162/341 (47%)
Query: 22 LVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIM 81
L+ S+++ + + + + +L YN + P + V ++L Q+I VN + Q
Sbjct: 11 LLHSLVLLTVSSDQYEIANKILDKYNAGLIPSMGKKSPIEVHFSMELYQIISVN-EPQ-- 67
Query: 82 TTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNN 141
Q + N WV + W D L W PE++G V + +P IWLPD LYN+
Sbjct: 68 ------------QFLMLNAWVVERWTDRLLGWDPEKFGNVTEIMLPHHFIWLPDTTLYNS 115
Query: 142 A---DGNYEVTIMTKAILHYDGKVVWNP---PAIYKSFCEIDVEYFPFDVQTCVMKFGSW 195
D + K +G + P IYK C +++ +FPFDVQ+C + FGSW
Sbjct: 116 LVMKDDENRRLLHAKVTTLGEGNGAFIELLYPTIYKLSCLLNLRFFPFDVQSCRLLFGSW 175
Query: 196 TYDGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDI 255
T+D +D +S I +++ W+++ +R+E Y CC Y +
Sbjct: 176 TFDNTKIDY---FAFNESQAIGTTNCIENE----GWNVLSTSVIRHENKYDCCPNNYTLL 228
Query: 256 IFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGE----KVSLCXXXXXXXXXXX 311
F +T++RK L+Y +NLIIP I+F+S++ F+ S E K++L
Sbjct: 229 EFRLTIQRKPLYYIINLIIPTSIITFISIIGFFSTSSINEPREEKITLGITTLLSMSILI 288
Query: 312 XXXAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNV 352
++ +P TS +PL+G + ++L++ S + + V+ V
Sbjct: 289 FMVSDKMPSTSSFIPLIGLFYTSMILLISFSTICSSVVIYV 329
>UNIPROTKB|O70212 [details] [associations]
symbol:HTR3A "5-hydroxytryptamine receptor 3A"
species:10141 "Cavia porcellus" [GO:0004890 "GABA-A receptor
activity" evidence=IDA] [GO:0006812 "cation transport"
evidence=IDA] [GO:0030285 "integral to synaptic vesicle membrane"
evidence=IDA] InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008132 InterPro:IPR008133
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR01708 PRINTS:PR01709 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030285 EMBL:AF006461 EMBL:AF006462 RefSeq:NP_001166178.1
ProteinModelPortal:O70212 STRING:O70212 GeneID:100135547 CTD:3359
eggNOG:NOG302526 HOGENOM:HOG000241519 HOVERGEN:HBG106638
BindingDB:O70212 ChEMBL:CHEMBL3666 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 GO:GO:0006812 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 Uniprot:O70212
Length = 490
Score = 364 (133.2 bits), Expect = 2.1e-33, P = 2.1e-33
Identities = 77/287 (26%), Positives = 144/287 (50%)
Query: 92 KNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 151
KNQ++TT +W Q W D L+W+PE++ + L +P++ IW+PDI++ D I
Sbjct: 81 KNQVLTTYIWYRQFWTDEFLQWNPEDFDNITKLSIPTDSIWVPDILINEFVDVGKSPNIP 140
Query: 152 TKAILHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGP 211
+ H G+V P + C +D+ FPFDVQ C + F SW + +++ + + P
Sbjct: 141 YVYVRH-QGEVQNYKPLQVVTACSLDIYNFPFDVQNCSLTFTSWLHTIQDINIS-LWRLP 198
Query: 212 DSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVN 271
+ K D + + EW+++ V E + ++ F + +RR+ LFY V
Sbjct: 199 EKVKSDKSVFMNQG----EWELLGVLTEFLEFSDRESRGSFAEMKFYVVIRRRPLFYAVT 254
Query: 272 LIIPCVGISFLSVLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKY 331
L++P + + + ++ FYLP DSGE+VS ++ +P T++ PL+ Y
Sbjct: 255 LLLPSIFLMIVDIVGFYLPPDSGERVSFKITLLLGYSVFLIIVSDTLPATAIGTPLISVY 314
Query: 332 LLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKIL 378
+ M L+ +S+ TI ++ + + + + W+ + +E + +L
Sbjct: 315 FVVCMALLVISLAETILIVRLVHKQDLQQPVPLWLRHLVLERIAGLL 361
Score = 226 (84.6 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 55/182 (30%), Positives = 89/182 (48%)
Query: 36 KRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQI 95
+RL D LL++Y + +RPV + TV + + ++ V+ KNQ++TT +W Q
Sbjct: 40 QRLSDHLLADYRKSVRPVRDWRKPTTVSIDAIVYAILSVDEKNQVLTTYIWYRQF----- 94
Query: 96 MTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAI 155
W D L+W+PE++ + L +P++ IW+PDI++ D I +
Sbjct: 95 ----------WTDEFLQWNPEDFDNITKLSIPTDSIWVPDILINEFVDVGKSPNIPYVYV 144
Query: 156 LHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSW--TYDGYTVDLKHILQGPDS 213
H G+V P + C +D+ FPFDVQ C + F SW T + L + + S
Sbjct: 145 RH-QGEVQNYKPLQVVTACSLDIYNFPFDVQNCSLTFTSWLHTIQDINISLWRLPEKVKS 203
Query: 214 DK 215
DK
Sbjct: 204 DK 205
>WB|WBGene00017375 [details] [associations]
symbol:pbo-6 species:6239 "Caenorhabditis elegans"
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA;IDA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IMP] InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PROSITE:PS00236
GO:GO:0016021 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
GeneTree:ENSGT00570000078866 GO:GO:0030163 EMBL:FO080802
EMBL:FO080804 ProteinModelPortal:Q19351 SMR:Q19351
EnsemblMetazoa:F11C7.1 UCSC:F11C7.1 WormBase:F11C7.1
eggNOG:NOG264587 HOGENOM:HOG000020771 InParanoid:Q19351 OMA:DISHNIE
NextBio:924414 Uniprot:Q19351
Length = 422
Score = 363 (132.8 bits), Expect = 2.7e-33, P = 2.7e-33
Identities = 101/371 (27%), Positives = 169/371 (45%)
Query: 19 LTFLVFSVIIAQGNDEAKRLYDDLLSNYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKN 78
LT +F + G E Y + +RL R + +K + G V++ +
Sbjct: 6 LTIFIFITTVTVGVAEFSEQYQ---GSSSRLTRHLLEKHNKCSPPDG-------RVDISH 55
Query: 79 QIMTTNVWVNQNLKNQIMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVL 138
I ++ + N NQ M V++ Q+W D L W EE+ G+ +P IW+PDI++
Sbjct: 56 NIELVHI-IGINELNQNMQVLVYIVQQWTDASLSWKVEEFRGIKHTWLPEHSIWIPDIIV 114
Query: 139 YNNADGNYEVTIMTKAI-LHYDGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTY 197
+N + + + I + Y G+V + PAIY C+I + FPFD Q C ++F SW Y
Sbjct: 115 FNTLEHKMLLEAVRSPIKVSYTGEVTYAYPAIYTVLCQIGIATFPFDDQVCKIRFASWAY 174
Query: 198 DGYTVDLKHILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIF 257
D + K +L L++Y + EW + V R E Y E +II+
Sbjct: 175 D----EDKILLNASHKPL------LKNYSPNEEWALQDVDMARKE--YEHEETVVSEIIY 222
Query: 258 NITLRRKTLFYTVNLIIPCVGISFLSVLV----FYLPSDSGEKVSLCXXXXXXXXXXXXX 313
I + RK +Y ++L++P I LS+ F + E+ +L
Sbjct: 223 YIKVARKPFYYLISLVVPSYIICVLSIAGLFARFSTKHERQERFTLGVTAILSMAVLSLV 282
Query: 314 XAEIIPPTSLTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKP--WVHKVFI 371
E +P +S VPLL Y+ F +++VT++ ++T V+ V+ + TH + P W+ KV +
Sbjct: 283 VTEKVPHSSENVPLLIVYMHFIIVMVTIATILTSTVMRVHAKGFRTHFLSPPNWIRKVLL 342
Query: 372 EVLPKILFIQR 382
F Q+
Sbjct: 343 IARKHANFFQQ 353
>WB|WBGene00013534 [details] [associations]
symbol:acr-24 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PROSITE:PS00236
GO:GO:0016021 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
GeneTree:ENSGT00570000078866 EMBL:AL132862 RefSeq:NP_001255865.1
ProteinModelPortal:H2KML8 SMR:H2KML8 EnsemblMetazoa:Y73F8A.30b
GeneID:190686 KEGG:cel:CELE_Y73F8A.30 CTD:190686
WormBase:Y73F8A.30b OMA:FLPHIRL Uniprot:H2KML8
Length = 578
Score = 373 (136.4 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 103/361 (28%), Positives = 174/361 (48%)
Query: 37 RLYDDLLS--NYNRLIRPVGNNSDKLTVKMGLKLSQLIEVNLKNQIMTTNVWVNQNLKNQ 94
RL DL Y+ +RPV N+S TV + L Q++ +N K Q N +L
Sbjct: 34 RLAKDLTDPRRYDSRVRPVMNHSKPTTVSFSMSLYQILSINEKQQ--------NVDL--- 82
Query: 95 IMTTNVWVNQEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVT---IM 151
NVW Q+W D L W+P YG ++T +P + IWLPD LYN+ N E T I
Sbjct: 83 ----NVWAIQKWNDDFLGWNPYLYGMINTTILPFDAIWLPDTYLYNSVVMNREETERYIN 138
Query: 152 TKAILHY-----DGKVVWNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKH 206
+Y +V + PA+Y++ C +D+ +FP+D Q C + SWT ++ +
Sbjct: 139 VVVTTNYWKGETGAEVKFMYPALYRTSCLLDIRFFPYDQQACKLTISSWTSSKSDINYE- 197
Query: 207 ILQGPDSDKIDIGIDLQDYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTL 266
P+ + ++ + ++ + EW ++ R E+ + CC EP+ + + +RRK L
Sbjct: 198 ----PEHESVN----MDNFLPNEEWVVVSFNIKRVEEKFVCCPEPWVLLEAVLVVRRKPL 249
Query: 267 FYTVNLIIPCVGISFLSVLVFYLP----SDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTS 322
+Y VNL+IP I+ ++V F+ S+ EK+SL +E +P +S
Sbjct: 250 YYIVNLVIPTSVITLVAVTGFFTAASTSSERREKLSLGIDSLLAMSILMMMVSEQMPTSS 309
Query: 323 LTVPLLGKYLLFTMILVTLSVVVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQR 382
VPL G + L + ++ + + T +LNV+ + + P V +F + + L ++
Sbjct: 310 DFVPLFGIFYLSIIFIIFIGTLFTAFILNVHLQKMYAKPVSPIVSYIFFGRIAQWLRMRP 369
Query: 383 P 383
P
Sbjct: 370 P 370
>ZFIN|ZDB-GENE-071012-5 [details] [associations]
symbol:htr3a "5-hydroxytryptamine (serotonin)
receptor 3A" species:7955 "Danio rerio" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0015276 "ligand-gated ion channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008132 InterPro:IPR008133
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR01708 PRINTS:PR01709 PROSITE:PS00236
ZFIN:ZDB-GENE-071012-5 GO:GO:0016021 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00570000078866
EMBL:CABZ01000799 IPI:IPI00902192 ProteinModelPortal:F1QQX3
Ensembl:ENSDART00000078620 Uniprot:F1QQX3
Length = 391
Score = 354 (129.7 bits), Expect = 3.3e-32, P = 3.3e-32
Identities = 75/278 (26%), Positives = 145/278 (52%)
Query: 104 QEWEDYKLKWSPEEYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHYDGKVV 163
++W D L W PEE+ V + +P+ +IW+PDI++ D I + H DG V
Sbjct: 2 KQWTDEFLMWDPEEFDEVKKISIPTANIWIPDILINEFVDVGKSPDIPYVYVGH-DGLVS 60
Query: 164 WNPPAIYKSFCEIDVEYFPFDVQTCVMKFGSWTYDGYTVDLKHILQGPDSDKIDIGIDLQ 223
P + C +++ FP+DVQ C + F SW + +++ +++ P++ K D + +
Sbjct: 61 NYKPIQVVTACSLNIYNFPYDVQKCSLTFQSWLHTTKDINIT-LMRSPEAVKTDKSVFMN 119
Query: 224 DYYLSVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLIIPCVGISFLS 283
EW+++ V + N F ++ Y ++ F++ +RR+ LFYTVNL++P + + +
Sbjct: 120 QG----EWELLHVLSTYNA-FSIDNDDYYAEMKFHVVIRRRPLFYTVNLLLPSMFLMVMD 174
Query: 284 VLVFYLPSDSGEKVSLCXXXXXXXXXXXXXXAEIIPPTSLTVPLLGKYLLFTMILVTLSV 343
++ FYLP DSGE+VS ++ +P T++ PL+G Y + M L+ +S+
Sbjct: 175 IVGFYLPPDSGERVSFKITLLLGYSVFLIIVSDTLPATAIGTPLIGVYFVVCMALLVISL 234
Query: 344 VVTIAVLNVNFRSPVTHVMKPWVHKVFIEVLPKILFIQ 381
++ ++ + + + + WV + +E +L I+
Sbjct: 235 TESVLIVRLVHKQDLQSRVPQWVKHLVLEKATVLLCIR 272
WARNING: HSPs involving 354 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.140 0.445 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 555 529 0.00092 119 3 11 22 0.38 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 604
No. of states in DFA: 621 (66 KB)
Total size of DFA: 350 KB (2171 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 42.43u 0.09s 42.52t Elapsed: 00:00:15
Total cpu time: 42.52u 0.09s 42.61t Elapsed: 00:00:17
Start: Thu Aug 15 12:42:00 2013 End: Thu Aug 15 12:42:17 2013
WARNINGS ISSUED: 2