BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7433
(213 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8TDJ6|DMXL2_HUMAN DmX-like protein 2 OS=Homo sapiens GN=DMXL2 PE=1 SV=2
Length = 3036
Score = 211 bits (536), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 139/204 (68%), Gaps = 25/204 (12%)
Query: 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASS 60
M++QCH+K TSDF F+ S SLVAT+GHS++++NVCLWD+L+ +L+ F CHD GA+
Sbjct: 2846 MSWQCHSKATSDFAFITSSSLVATSGHSNDNRNVCLWDTLISPGNSLIHGFTCHDHGATV 2905
Query: 61 LVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGD 120
L +AP+ QLLIS G+KG +C+ D+RQR + F AH+S +K LA+DP+EE+F T
Sbjct: 2906 LQYAPKQQLLISGGRKGHVCIFDIRQRQLIHTFQAHDSAIKALALDPYEEYFTT------ 2959
Query: 121 IKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQL 180
G+ +G+IKVW L+G+ L+++F EHA+ S F++IG GV Q+
Sbjct: 2960 -------------------GSAEGNIKVWRLTGHGLIHSFKSEHAKQSIFRNIGAGVMQI 3000
Query: 181 HVDGGSRLFSCGADGSMKVRQLPD 204
+ G+RLFSCGADG++K R LP+
Sbjct: 3001 DIIQGNRLFSCGADGTLKTRVLPN 3024
>sp|Q9Y485|DMXL1_HUMAN DmX-like protein 1 OS=Homo sapiens GN=DMXL1 PE=1 SV=3
Length = 3027
Score = 208 bits (530), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/205 (49%), Positives = 135/205 (65%), Gaps = 25/205 (12%)
Query: 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASS 60
+T+QCHNK +DFVF+ S SL+ATAG S++++NVCLWD+L+ +LV AF CHD GA+
Sbjct: 2832 LTWQCHNKTANDFVFVSSSSLIATAGLSTDNRNVCLWDTLVAPANSLVHAFTCHDSGATV 2891
Query: 61 LVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGD 120
L +AP+HQLLIS G+KG V DL QR R F +H+SPVK +A+DP EE+FVT
Sbjct: 2892 LAYAPKHQLLISGGRKGFTYVFDLCQRQQRQLFQSHDSPVKAVAVDPTEEYFVT------ 2945
Query: 121 IKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQL 180
G+ +G+IK+WSLS LL+ F EHAR S F++IG GV Q+
Sbjct: 2946 -------------------GSAEGNIKIWSLSTFGLLHTFVSEHARQSIFRNIGTGVMQI 2986
Query: 181 HVDGGSRLFSCGADGSMKVRQLPDR 205
+ +FSCGADG+MK+R LPD+
Sbjct: 2987 ETGPANHIFSCGADGTMKMRILPDQ 3011
>sp|Q6PNC0|DMXL1_MOUSE DmX-like protein 1 OS=Mus musculus GN=Dmxl1 PE=1 SV=1
Length = 3013
Score = 206 bits (525), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 102/205 (49%), Positives = 136/205 (66%), Gaps = 25/205 (12%)
Query: 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASS 60
+ +QCHNK +DFVF+ S SL+ATAG SS+++N+CLWD+L+ +LV AF CHD GA+
Sbjct: 2818 LAWQCHNKTANDFVFVSSSSLIATAGLSSDNRNICLWDTLVAPANSLVHAFTCHDSGATV 2877
Query: 61 LVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGD 120
L +AP+HQLLIS G+KG C+ DLRQR R F +H+SPVK +AIDP EE+FVT
Sbjct: 2878 LAYAPKHQLLISGGRKGFTCIFDLRQRQQRQLFQSHDSPVKAIAIDPTEEYFVT------ 2931
Query: 121 IKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQL 180
G+ +G+IK+WSLS LL+ F EHAR S F++IG GV Q+
Sbjct: 2932 -------------------GSAEGNIKIWSLSSFSLLHTFINEHARQSIFRNIGTGVMQI 2972
Query: 181 HVDGGSRLFSCGADGSMKVRQLPDR 205
+ +FSCGADG+MK+R LPD+
Sbjct: 2973 ETGPANHIFSCGADGTMKMRILPDQ 2997
>sp|Q8BPN8|DMXL2_MOUSE DmX-like protein 2 OS=Mus musculus GN=Dmxl2 PE=1 SV=3
Length = 3032
Score = 203 bits (516), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 95/203 (46%), Positives = 135/203 (66%), Gaps = 25/203 (12%)
Query: 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASS 60
M++QCH+K TSDF F+ S SLVAT+GHS++++NVCLWD+L+ +L+ F CHD GA+
Sbjct: 2842 MSWQCHSKATSDFAFITSSSLVATSGHSNDNRNVCLWDTLISPGNSLIHGFTCHDHGATV 2901
Query: 61 LVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGD 120
L +AP+ QLLIS G+KG IC+ D+RQR + F AH+S +K LA+D EE+F T
Sbjct: 2902 LQYAPKQQLLISGGRKGYICIFDIRQRQLIHTFQAHDSAIKALALDSCEEYFTT------ 2955
Query: 121 IKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQL 180
G+ +G+IKVW L+G+ L+++F EHA+ S F++IG GV Q+
Sbjct: 2956 -------------------GSAEGNIKVWRLTGHGLIHSFKSEHAKQSIFRNIGAGVMQI 2996
Query: 181 HVDGGSRLFSCGADGSMKVRQLP 203
+ +RLFSCGADG++K R LP
Sbjct: 2997 AISQDNRLFSCGADGTLKTRVLP 3019
>sp|D3ZW91|POC1B_RAT POC1 centriolar protein homolog B OS=Rattus norvegicus GN=Poc1b
PE=2 SV=1
Length = 477
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 73/175 (41%), Gaps = 23/175 (13%)
Query: 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLV 62
++ H + F +C +ATA S + LW SL P +A +V H +SL
Sbjct: 14 FKGHKAAITSADFSPNCKQIATA---SWDTFLMLW-SLKPHARAY--RYVGHKDVVTSLQ 67
Query: 63 FAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
F+PQ LL SA + + + L ++ S F AH +PV+ + +F VT + D IK
Sbjct: 68 FSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIK 127
Query: 123 -----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNF 160
V+C P V+ + D IK+W + + NF
Sbjct: 128 VWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNF 182
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 59/152 (38%), Gaps = 20/152 (13%)
Query: 29 SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRV 88
SE K + +WD+ K V F A+ + F+P + SAG + + D+R
Sbjct: 163 SEDKTIKIWDT---TSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNR 219
Query: 89 IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAID 131
+ + H V CL+ P VT + DG +K PV ++
Sbjct: 220 LLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSFS 279
Query: 132 PHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGE 163
E F +G D + VW S N + Y P +
Sbjct: 280 KDGELFTSGGADAQVLVWRTSFNQVHYRDPSK 311
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 8/110 (7%)
Query: 12 DFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLI 71
DF G+C A + H+ V +WD + + L+Q + H G + L F P L+
Sbjct: 193 DFSPNGTCIASAGSDHA-----VRIWDIRMNR---LLQHYQVHSCGVNCLSFHPSGNSLV 244
Query: 72 SAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121
+A G + ++DL + + H PV ++ E F +G D +
Sbjct: 245 TASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQV 294
>sp|Q8BHD1|POC1B_MOUSE POC1 centriolar protein homolog B OS=Mus musculus GN=Poc1b PE=1
SV=1
Length = 476
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 73/176 (41%), Gaps = 23/176 (13%)
Query: 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSL 61
+++ H + F +C +ATA S + LW SL P +A +V H +SL
Sbjct: 13 SFKGHKAAITSADFSPNCKQIATA---SWDTFLMLW-SLKPHARAY--RYVGHKDVVTSL 66
Query: 62 VFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121
F+PQ LL SA + + + L ++ S F AH +PV+ + + VT + D I
Sbjct: 67 QFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSI 126
Query: 122 K-----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNF 160
K V+C P V+ + D IK+W + + NF
Sbjct: 127 KVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 182
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 59/160 (36%), Gaps = 20/160 (12%)
Query: 29 SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRV 88
SE K + +WD+ K V F A+ + F P + SAG + + D+R
Sbjct: 163 SEDKTIKIWDT---TNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNK 219
Query: 89 IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAID 131
+ + H V CL+ P VT + DG +K PV ++
Sbjct: 220 LLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFS 279
Query: 132 PHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFK 171
E +G D + +W + HL P + + F+
Sbjct: 280 KDGELLTSGGADAQVLIWRTNFIHLHCKDPKRNLKRLHFE 319
>sp|P87053|POF1_SCHPO F-box/WD repeat-containing protein pof1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=pof1 PE=1 SV=1
Length = 605
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 86/229 (37%), Gaps = 51/229 (22%)
Query: 17 GSCSLVATAGHS----------------SESKNVCLWDSLLPQKKALVQAFVCHDQGASS 60
G C V +GHS S + LW+ Q+ AL++ H G +
Sbjct: 262 GRCRQVVLSGHSDGVMCLQLVRNILASGSYDATIRLWNLATFQQVALLEG---HSSGVTC 318
Query: 61 LVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGD 120
L F LIS I + + R S + H V CL D V+G+ D
Sbjct: 319 LQF--DQCKLISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFD--STLLVSGSADCT 374
Query: 121 IK----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEH 164
+K PV + I ++G+ D IK+WSL N L+ F
Sbjct: 375 VKLWHFSGGKRITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSA-- 432
Query: 165 ARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDAVVHTLY 213
HIG Q SRLFSC DG++K + ++ VHTL+
Sbjct: 433 -------HIGP--VQSLALADSRLFSCSLDGTIKQWDI-EKKKCVHTLF 471
>sp|O13615|PRP46_SCHPO Pre-mRNA-splicing factor prp5 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=prp5 PE=1 SV=1
Length = 473
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 31/185 (16%)
Query: 30 ESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVI 89
E K V WD + +++ + H G +L P +L++AG+ V D+R R
Sbjct: 225 EDKMVKCWDL---ETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMRTRQN 281
Query: 90 RSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI-----------------KSPVKCLAIDP 132
+ H+S V LA+ + VTG+ D I K V+ L++ P
Sbjct: 282 VHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKTLTTLTHHKKTVRALSLHP 341
Query: 133 HEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCG 192
E F +G+ D +IK W + NF G +A V L ++ + +FS
Sbjct: 342 DEFTFASGSSD-NIKHWKFPEGAFMGNFEGHNAI----------VNTLSINSDNVMFSGA 390
Query: 193 ADGSM 197
+GSM
Sbjct: 391 DNGSM 395
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG 184
V+C+ ++P ++F TGAGD IK+W L+ L G A G V+ H
Sbjct: 166 VRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVR-----GLAVSPRH--- 217
Query: 185 GSRLFSCGADGSMKVRQLPDRDAVVH 210
LFSCG D +K L + H
Sbjct: 218 -PYLFSCGEDKMVKCWDLETNKVIRH 242
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 17/87 (19%)
Query: 93 FNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEE 135
+ H V+C+ ++P ++F TGAGD IK + V+ LA+ P
Sbjct: 159 ISGHLGWVRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRHP 218
Query: 136 FFVTGAGDGDIKVWSLSGNHLLYNFPG 162
+ + D +K W L N ++ ++ G
Sbjct: 219 YLFSCGEDKMVKCWDLETNKVIRHYHG 245
>sp|Q7ZUV2|KTNB1_DANRE Katanin p80 WD40 repeat-containing subunit B1 OS=Danio rerio
GN=katnb1 PE=2 SV=1
Length = 694
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 84/197 (42%), Gaps = 35/197 (17%)
Query: 29 SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRV 88
S S ++ LWD + +++ + H SSL F P + L S +I + D+R++
Sbjct: 82 SLSGSLRLWDL---EAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKG 138
Query: 89 IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAID 131
R+ H V+CLA P ++ + + D +K S V +
Sbjct: 139 CVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFH 198
Query: 132 PHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEH--ARSSFFKHIGQGVTQLHVDGGSRLF 189
P+E +G+ D +K+W L +++ + GE RS F GS L+
Sbjct: 199 PNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFN-----------PDGSCLY 247
Query: 190 SCGADGSMKVRQL-PDR 205
S G++ +++V PDR
Sbjct: 248 S-GSENTLRVYGWEPDR 263
Score = 34.7 bits (78), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 56/150 (37%), Gaps = 26/150 (17%)
Query: 48 VQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDP 107
+Q V H SSLV L++ G G+ C +++ A P +++
Sbjct: 13 LQEIVAHSSNVSSLVLGKSSGRLLATG--GEDCRVNIW---------AVSKPNCIMSLTG 61
Query: 108 HEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARS 167
H S V C+ + EE V G+ G +++W L +L G A
Sbjct: 62 H-------------TSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASI 108
Query: 168 SF--FKHIGQGVTQLHVDGGSRLFSCGADG 195
S F +G+ + VD +L+ G
Sbjct: 109 SSLDFHPMGEYLASGSVDSNIKLWDVRRKG 138
>sp|Q12417|PRP46_YEAST Pre-mRNA-splicing factor PRP46 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PRP46 PE=1 SV=1
Length = 451
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 27/155 (17%)
Query: 29 SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRV 88
SE K V WD +K +++ + H G ++ P L+ +AG+ I + D+R R+
Sbjct: 201 SEDKTVKCWDL---EKNQIIRDYYGHLSGVRTVSIHPTLDLIATAGRDSVIKLWDMRTRI 257
Query: 89 IRSRFNAHESP---VKCLAIDPHEEFFVTGAGDGDI-----------------KSPVKCL 128
H+ P V+C +DP V+ + D + K V+
Sbjct: 258 PVITLVGHKGPINQVQCTPVDPQ---VVSSSTDATVRLWDVVAGKTMKVLTHHKRSVRAT 314
Query: 129 AIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGE 163
A+ P +EF V A DI+ W L+ LL NF E
Sbjct: 315 ALHP-KEFSVASACTDDIRSWGLAEGSLLTNFESE 348
Score = 38.9 bits (89), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 18/88 (20%)
Query: 93 FNAHESPVKCLAIDP-HEEFFVTGAGDGDIK-----------------SPVKCLAIDPHE 134
N H V+C+AIDP E+F+TG+ D +K V+ +A+
Sbjct: 135 INGHLGWVRCVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDVAVSDRH 194
Query: 135 EFFVTGAGDGDIKVWSLSGNHLLYNFPG 162
+ + + D +K W L N ++ ++ G
Sbjct: 195 PYLFSVSEDKTVKCWDLEKNQIIRDYYG 222
>sp|Q6P5M2|WDR61_DANRE WD repeat-containing protein 61 OS=Danio rerio GN=wdr61 PE=2 SV=1
Length = 305
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 64/161 (39%), Gaps = 26/161 (16%)
Query: 60 SLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDG 119
S+ ++P + L S G I + D+ + H P++ L P + VT + DG
Sbjct: 153 SIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDG 212
Query: 120 DIK-----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPG 162
IK S V +A P + FV+ + D IKVW S +
Sbjct: 213 YIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCV----- 267
Query: 163 EHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLP 203
++FF H Q + + GS++ S G D ++ + P
Sbjct: 268 ----NTFFDHQDQVWSVKYNPTGSKIVSAGDDRAIHIYDCP 304
>sp|Q4WT34|PRP46_ASPFU Pre-mRNA-splicing factor prp46 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=prp46
PE=3 SV=1
Length = 453
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 75/188 (39%), Gaps = 37/188 (19%)
Query: 30 ESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVI 89
E K V WD + +++ + H G +L P+ LL++ G+ G V D+R R
Sbjct: 206 EDKMVKCWDL---ETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARVWDMRTRSN 262
Query: 90 RSRFNAHESPV---KCLAIDPHEEFFVTGAGDGDI-----------------KSPVKCLA 129
+ H+ V KC DP +TG+ D + K V+ LA
Sbjct: 263 IHVLSGHKGTVADLKCQEADPQ---IITGSLDATVRLWDLAAGKTMGVLTHHKKGVRNLA 319
Query: 130 IDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLF 189
I P EF A G IK W + NF G +A + L V+ + LF
Sbjct: 320 IHP-REFTFASASTGSIKQWKCPEGDFMQNFEGHNAV----------INSLAVNEDNVLF 368
Query: 190 SCGADGSM 197
S G +GSM
Sbjct: 369 SGGDNGSM 376
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 17/90 (18%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHI----GQGVTQL 180
V+ LA++P+ E+F +GAGD IK+W+L+ L G HI G V+
Sbjct: 147 VRSLAVEPNNEWFASGAGDRTIKIWNLATGALRLTLTG---------HISTVRGLAVSPR 197
Query: 181 HVDGGSRLFSCGADGSMKVRQLPDRDAVVH 210
H LFSCG D +K L + H
Sbjct: 198 H----PYLFSCGEDKMVKCWDLETNKVIRH 223
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 17/87 (19%)
Query: 93 FNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEE 135
+ H V+ LA++P+ E+F +GAGD IK S V+ LA+ P
Sbjct: 140 ISGHLGWVRSLAVEPNNEWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAVSPRHP 199
Query: 136 FFVTGAGDGDIKVWSLSGNHLLYNFPG 162
+ + D +K W L N ++ ++ G
Sbjct: 200 YLFSCGEDKMVKCWDLETNKVIRHYHG 226
>sp|Q5BE22|PRP46_EMENI Pre-mRNA-splicing factor prp46 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=prp46
PE=3 SV=1
Length = 452
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 75/188 (39%), Gaps = 37/188 (19%)
Query: 30 ESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVI 89
E K V WD + +++ + H G +L P+ LL++ G+ G V D+R R
Sbjct: 205 EDKMVKCWDL---ETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARVWDMRTRSN 261
Query: 90 RSRFNAHE---SPVKCLAIDPHEEFFVTGAGDGDI-----------------KSPVKCLA 129
+ H + V+C DP +TG+ D + K ++ LA
Sbjct: 262 IHVLSGHTGTVADVQCQEADPQ---VITGSLDATVRLWDLAAGKTMGVLTHHKKGIRSLA 318
Query: 130 IDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLF 189
P EF A G IK W G + NF G +A + L V+ + LF
Sbjct: 319 THP-REFTFASASTGSIKQWKCPGGEFMQNFEGHNAI----------INTLSVNEDNVLF 367
Query: 190 SCGADGSM 197
S G +GSM
Sbjct: 368 SGGDNGSM 375
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 17/90 (18%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHI----GQGVTQL 180
V+ LA++P+ E+F +GAGD IK+W+L+ L G HI G V+
Sbjct: 146 VRSLAVEPNNEWFASGAGDRTIKIWNLATGALRLTLTG---------HISTVRGLAVSPR 196
Query: 181 HVDGGSRLFSCGADGSMKVRQLPDRDAVVH 210
H LFSCG D +K L + H
Sbjct: 197 H----PYLFSCGEDKMVKCWDLETNKVIRH 222
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 17/87 (19%)
Query: 93 FNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEE 135
+ H V+ LA++P+ E+F +GAGD IK S V+ LA+ P
Sbjct: 139 ISGHLGWVRSLAVEPNNEWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAVSPRHP 198
Query: 136 FFVTGAGDGDIKVWSLSGNHLLYNFPG 162
+ + D +K W L N ++ ++ G
Sbjct: 199 YLFSCGEDKMVKCWDLETNKVIRHYHG 225
>sp|Q09715|TUP11_SCHPO Transcriptional repressor tup11 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tup11 PE=1 SV=1
Length = 614
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 16/110 (14%)
Query: 60 SLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDG 119
++ F+P + L++ + I + DL + +R F+ HE + L + F V+G+GD
Sbjct: 365 TIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDR 424
Query: 120 ----------------DIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSG 153
+I++ V +AI P+++F G+ D I+VWS+SG
Sbjct: 425 TARLWDVETGQCILKLEIENGVTAIAISPNDQFIAVGSLDQIIRVWSVSG 474
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 24/141 (17%)
Query: 29 SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG--KKGDICVIDLRQ 86
+E + + LWD L QK V F H+Q SL F+ + ++S + + ++ Q
Sbjct: 379 TEDRQIKLWD-LSTQKVRYV--FSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQ 435
Query: 87 RVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI----------------KSPVKCLAI 130
+++ E+ V +AI P+++F G+ D I K V +A
Sbjct: 436 CILKLEI---ENGVTAIAISPNDQFIAVGSLDQIIRVWSVSGTLVERLEGHKESVYSIAF 492
Query: 131 DPHEEFFVTGAGDGDIKVWSL 151
P ++G+ D IKVW L
Sbjct: 493 SPDSSILLSGSLDKTIKVWEL 513
Score = 37.7 bits (86), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSF---FKHIGQGVTQLH 181
V+ +A P ++ VTG D IK+W LS + Y F G H + + F H G+ +
Sbjct: 363 VRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSG-HEQDIYSLDFSHNGRFIVSGS 421
Query: 182 VDGGSRLF 189
D +RL+
Sbjct: 422 GDRTARLW 429
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/134 (19%), Positives = 53/134 (39%), Gaps = 29/134 (21%)
Query: 47 LVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLR------------QRVIRSRFN 94
LV+ H + S+ F+P +L+S I V +L+ + + ++ +
Sbjct: 476 LVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYT 535
Query: 95 AHESPVKCLAIDPHEEFFVTGAGDGDI-----------------KSPVKCLAIDPHEEFF 137
H V +A+ P + ++G+ D + K+ V + P F
Sbjct: 536 GHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQF 595
Query: 138 VTGAGDGDIKVWSL 151
+G+GD ++WS+
Sbjct: 596 ASGSGDLRARIWSI 609
>sp|Q5ZIU8|KTNB1_CHICK Katanin p80 WD40 repeat-containing subunit B1 OS=Gallus gallus
GN=KATNB1 PE=2 SV=2
Length = 657
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 56/137 (40%), Gaps = 17/137 (12%)
Query: 43 QKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKC 102
K V + H SL + + +L+++ + G I V DL I H++ +
Sbjct: 51 NKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICS 110
Query: 103 LAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGD 145
L P+ F +G+ D DIK V+CL P ++ + A D
Sbjct: 111 LDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHT 170
Query: 146 IKVWSLSGNHLLYNFPG 162
+K+W L+ +++ F G
Sbjct: 171 VKLWDLTAGKVMFEFTG 187
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 60/146 (41%), Gaps = 20/146 (13%)
Query: 29 SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRV 88
S+S ++ +WD + +++ + H SL F P + S DI + D+R++
Sbjct: 82 SQSGSIRVWDL---EAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKG 138
Query: 89 IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAID 131
++ +H V+CL P ++ + A D +K PV +
Sbjct: 139 CIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFH 198
Query: 132 PHEEFFVTGAGDGDIKVWSLSGNHLL 157
P E +G+ D I+ W L H++
Sbjct: 199 PSEYLLASGSSDRTIRFWDLEKFHVV 224
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 46/117 (39%), Gaps = 20/117 (17%)
Query: 33 NVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSR 92
++ LWD ++K + + H Q L F+P + L SA + + DL +
Sbjct: 128 DIKLWDV---RRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFE 184
Query: 93 FNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDP 132
F H PV + P E +G+ D I+ +PV+C+ +P
Sbjct: 185 FTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNP 241
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 45/118 (38%), Gaps = 24/118 (20%)
Query: 48 VQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDP 107
+Q V H SSLV L++ G GD C +++ + P +++
Sbjct: 13 LQEIVAHSSNVSSLVLGKSTGRLLATG--GDDCRVNVW---------SVNKPNCVMSLTG 61
Query: 108 HEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHA 165
H +P++ L I EE V G+ G I+VW L +L G A
Sbjct: 62 H-------------TTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKA 106
>sp|Q8BG40|KTNB1_MOUSE Katanin p80 WD40 repeat-containing subunit B1 OS=Mus musculus
GN=Katnb1 PE=1 SV=1
Length = 658
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 67/165 (40%), Gaps = 22/165 (13%)
Query: 29 SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRV 88
S+S ++ +WD + +++ + H SL F P + + S + +I + D+R++
Sbjct: 82 SQSGSIRVWDL---EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG 138
Query: 89 IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAID 131
R+ H V+CL P ++ + A D +K PV +
Sbjct: 139 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 198
Query: 132 PHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGE--HARSSFFKHIG 174
P+E +G+ D I+ W L ++ GE RS F G
Sbjct: 199 PNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDG 243
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 46/118 (38%), Gaps = 24/118 (20%)
Query: 48 VQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDP 107
+Q V H SSLV L++ G GD C ++L + P +++
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATG--GDDCRVNLW---------SINKPNCIMSLTG 61
Query: 108 HEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHA 165
H SPV+ + ++ EE V G+ G I+VW L +L G A
Sbjct: 62 H-------------TSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKA 106
>sp|Q8H0T9|KTNB1_ARATH Katanin p80 WD40 repeat-containing subunit B1 homolog
OS=Arabidopsis thaliana GN=At5g23430 PE=2 SV=3
Length = 837
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 33 NVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSR 92
N+ +WD +KK + + H +G + L F P + ++S G+ + V DL + +
Sbjct: 124 NLKIWDI---RKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTE 180
Query: 93 FNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
F +HE ++ L PHE TG+ D +K
Sbjct: 181 FKSHEGQIQSLDFHPHEFLLATGSADRTVK 210
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 62/162 (38%), Gaps = 27/162 (16%)
Query: 18 SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKG 77
S ++ T G E V LW P + + H G S+ F L+ + G
Sbjct: 28 SSRVLVTGG---EDHKVNLWAIGKPNA---ILSLYGHSSGIDSVTFDASEVLVAAGAASG 81
Query: 78 DICVIDLRQRVIRSRFNAHESPVKCLAID--PHEEFFVTGAGDGDIK------------- 122
I + DL + I H S C+++D P EFF +G+ D ++K
Sbjct: 82 TIKLWDLEEAKIVRTLTGHRS--NCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTY 139
Query: 123 ----SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNF 160
V L P + V+G D +KVW L+ LL F
Sbjct: 140 KGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEF 181
>sp|Q9BVA0|KTNB1_HUMAN Katanin p80 WD40 repeat-containing subunit B1 OS=Homo sapiens
GN=KATNB1 PE=1 SV=1
Length = 655
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 67/165 (40%), Gaps = 22/165 (13%)
Query: 29 SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRV 88
S+S ++ +WD + +++ + H SL F P + + S + +I + D+R++
Sbjct: 82 SQSGSIRVWDL---EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG 138
Query: 89 IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAID 131
R+ H V+CL P ++ + A D +K PV +
Sbjct: 139 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 198
Query: 132 PHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGE--HARSSFFKHIG 174
P+E +G+ D I+ W L ++ GE RS F G
Sbjct: 199 PNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDG 243
Score = 36.6 bits (83), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 46/118 (38%), Gaps = 24/118 (20%)
Query: 48 VQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDP 107
+Q V H SSLV L++ G GD C ++L + P +++
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATG--GDDCRVNLW---------SINKPNCIMSLTG 61
Query: 108 HEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHA 165
H SPV+ + ++ EE V G+ G I+VW L +L G A
Sbjct: 62 H-------------TSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKA 106
>sp|Q75BY3|PRP46_ASHGO Pre-mRNA-splicing factor PRP46 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=PRP46
PE=3 SV=2
Length = 425
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 66/156 (42%), Gaps = 27/156 (17%)
Query: 28 SSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR 87
+S+ K V WD ++ +V+ F G S+ P L++SAG+ + V D+R R
Sbjct: 174 ASQDKLVKCWDL---ERNTVVRDFHGTLSGVHSVDLHPSLDLIVSAGRDSVVRVWDIRSR 230
Query: 88 VIRSRFNAHESP---VKCLAIDPHEEFFVTGAGDGDIK-------SPVKC---------- 127
H P V+CL +DP V+ + D +K P+K
Sbjct: 231 SCVLTLAGHRGPINKVRCLPVDPQ---IVSCSTDATVKLWDLVAGKPMKTLTHHKRNVRD 287
Query: 128 LAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGE 163
LA +P E F + D DI+ W L LL NF E
Sbjct: 288 LAFNPTEFSFASACTD-DIRSWKLVDGQLLTNFNSE 322
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 36/88 (40%), Gaps = 18/88 (20%)
Query: 93 FNAHESPVKCLAIDPHEE-FFVTGAGDGDIK-----------------SPVKCLAIDPHE 134
N H V+C+ +DP + +F TG+ D I+ V+ + I
Sbjct: 109 INGHTGWVRCVCVDPVDNAWFATGSNDSTIRVWDLATGKLKVTLQGHIMTVRDICISARH 168
Query: 135 EFFVTGAGDGDIKVWSLSGNHLLYNFPG 162
+ + + D +K W L N ++ +F G
Sbjct: 169 PYMFSASQDKLVKCWDLERNTVVRDFHG 196
>sp|F6ZT52|POC1B_XENTR POC1 centriolar protein homolog B OS=Xenopus tropicalis GN=poc1b
PE=2 SV=1
Length = 470
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 8/110 (7%)
Query: 12 DFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLI 71
DF +G+C VA+AG S K +WD + L+Q + H+ G +SL F P L+
Sbjct: 193 DFNPMGTC--VASAGVDSTVK---VWDI---RTNKLLQHYQVHNAGVNSLSFHPSGNYLL 244
Query: 72 SAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121
+A G + ++DL + + + H+ PV +A + F +GA D +
Sbjct: 245 TASNDGTVKILDLLEGRLIYTLHGHQGPVLSVAFSKSGDQFASGATDAQV 294
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 55/138 (39%), Gaps = 20/138 (14%)
Query: 29 SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRV 88
S+ K V +WD + + FV + ++ + F P + SAG + V D+R
Sbjct: 163 SDDKTVRIWDI---TNRLCINTFVDYKGHSNYVDFNPMGTCVASAGVDSTVKVWDIRTNK 219
Query: 89 IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAID 131
+ + H + V L+ P + +T + DG +K PV +A
Sbjct: 220 LLQHYQVHNAGVNSLSFHPSGNYLLTASNDGTVKILDLLEGRLIYTLHGHQGPVLSVAFS 279
Query: 132 PHEEFFVTGAGDGDIKVW 149
+ F +GA D + VW
Sbjct: 280 KSGDQFASGATDAQVLVW 297
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/180 (17%), Positives = 65/180 (36%), Gaps = 26/180 (14%)
Query: 43 QKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKC 102
+ AL + F H + + F+P + L S+ + + + + + ++ H+ V C
Sbjct: 6 EDPALQRHFKGHKDAVTYVDFSPDGKQLASSSADACVMIWNFKPQSRAYKYPGHKEAVTC 65
Query: 103 LAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGD 145
+ P + + D ++ + V+C+ F+T + D
Sbjct: 66 VQFSPSGHLVASSSKDRTVRLWAPNIKGESSVLKAHTAVVRCVNFSSDGHTFITASDDKS 125
Query: 146 IKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDR 205
IK W+L LY S +H G + SC D ++++ + +R
Sbjct: 126 IKAWNLHRQRFLY---------SLTEHTNWVRCARFSPDGRLIASCSDDKTVRIWDITNR 176
Score = 34.7 bits (78), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 76/219 (34%), Gaps = 36/219 (16%)
Query: 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLV 62
Y H + + F S LVA+ SS+ + V LW P K H +
Sbjct: 56 YPGHKEAVTCVQFSPSGHLVAS---SSKDRTVRLW---APNIKGESSVLKAHTAVVRCVN 109
Query: 63 FAPQHQLLISAGKKGDICVIDL-RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDG-- 119
F+ I+A I +L RQR + S H + V+C P + + D
Sbjct: 110 FSSDGHTFITASDDKSIKAWNLHRQRFLYS-LTEHTNWVRCARFSPDGRLIASCSDDKTV 168
Query: 120 ---------------DIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEH 164
D K + +P + D +KVW + N LL ++ +
Sbjct: 169 RIWDITNRLCINTFVDYKGHSNYVDFNPMGTCVASAGVDSTVKVWDIRTNKLLQHYQVHN 228
Query: 165 ARSSFFKHIGQGVTQLHV-DGGSRLFSCGADGSMKVRQL 202
A GV L G+ L + DG++K+ L
Sbjct: 229 A----------GVNSLSFHPSGNYLLTASNDGTVKILDL 257
>sp|Q10051|PRP19_CAEEL Pre-mRNA-processing factor 19 homolog OS=Caenorhabditis elegans
GN=T10F2.4 PE=3 SV=2
Length = 492
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 76/180 (42%), Gaps = 25/180 (13%)
Query: 32 KNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRS 91
K V L+D +K+ ++Q F H++ +++V P + ISA I V ++
Sbjct: 231 KTVVLYDY---EKEQVMQTFKGHNKKINAVVLHPDNITAISASADSHIRVWSATDSSSKA 287
Query: 92 RFNAHESPVKCLAIDPHEEFFVTGAGD-----GDIKS---------------PVKCLAID 131
+ H++PV ++++ ++ ++ + D DI+S V +
Sbjct: 288 IIDVHQAPVTDISLNASGDYILSASDDSYWAFSDIRSGKSLCKVSVEPGSQIAVHSIEFH 347
Query: 132 PHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHA--RSSFFKHIGQGVTQLHVDGGSRLF 189
P F TGA D +K+W L + FPG A RS F G + DG +L+
Sbjct: 348 PDGLIFGTGAADAVVKIWDLKNQTVAAAFPGHTAAVRSIAFSENGYYLATGSEDGEVKLW 407
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 68/176 (38%), Gaps = 23/176 (13%)
Query: 4 QCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVF 63
Q H + VF S +A+ S + V LW+ + K L F H +S+VF
Sbjct: 1197 QGHTSWVNSVVFNPDGSTLASG---SSDQTVRLWE--INSSKCLC-TFQGHTSWVNSVVF 1250
Query: 64 APQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK- 122
P +L S + + D+ F H + V +A +P +G+GD ++
Sbjct: 1251 NPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRL 1310
Query: 123 ---SPVKCL-------------AIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPG 162
S KCL P +G+ D +++WS+S LY F G
Sbjct: 1311 WEISSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLG 1366
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 67/178 (37%), Gaps = 23/178 (12%)
Query: 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSL 61
T+Q H + VF S++A+ S K V LWD + K L F H +S+
Sbjct: 1237 TFQGHTSWVNSVVFNPDGSMLASG---SSDKTVRLWD--ISSSKCL-HTFQGHTNWVNSV 1290
Query: 62 VFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121
F P +L S + + ++ F H S V + P +G+ D +
Sbjct: 1291 AFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTV 1350
Query: 122 K----SPVKCL-------------AIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPG 162
+ S +CL P +G+GD +++WS+S LY G
Sbjct: 1351 RLWSISSGECLYTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLWSISSGKCLYTLQG 1408
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 61/157 (38%), Gaps = 20/157 (12%)
Query: 23 ATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVI 82
AT S + V LWD + ++Q H +S+VF P L S + +
Sbjct: 1171 ATLASGSGDQTVRLWDISSSKCLYILQG---HTSWVNSVVFNPDGSTLASGSSDQTVRLW 1227
Query: 83 DLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----SPVKCL---------- 128
++ F H S V + +P +G+ D ++ S KCL
Sbjct: 1228 EINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWV 1287
Query: 129 ---AIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPG 162
A +P +G+GD +++W +S + L+ F G
Sbjct: 1288 NSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQG 1324
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 66/177 (37%), Gaps = 23/177 (12%)
Query: 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLV 62
+Q H VF +++A+ S+ + V LWD + H S+V
Sbjct: 1028 FQGHTSCVRSVVFSSDGAMLASG---SDDQTVRLWD---ISSGNCLYTLQGHTSCVRSVV 1081
Query: 63 FAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
F+P +L S G + + D+ + S V+ L P+ G+ D ++
Sbjct: 1082 FSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVR 1141
Query: 123 ----SPVKCL-------------AIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPG 162
S KCL A P +G+GD +++W +S + LY G
Sbjct: 1142 LWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQG 1198
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 66/178 (37%), Gaps = 23/178 (12%)
Query: 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSL 61
T+Q H + F S++A+ S + V LW+ + K L F H SS+
Sbjct: 1279 TFQGHTNWVNSVAFNPDGSMLASG---SGDQTVRLWE--ISSSKCL-HTFQGHTSWVSSV 1332
Query: 62 VFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121
F+P +L S + + + F H + V + P +G+GD +
Sbjct: 1333 TFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSPDGAILASGSGDQTV 1392
Query: 122 K----SPVKCL-------------AIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPG 162
+ S KCL P +G+ D +++W++S LY G
Sbjct: 1393 RLWSISSGKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSGECLYTLHG 1450
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 67/179 (37%), Gaps = 23/179 (12%)
Query: 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASS 60
+T + HN + F ++A+ S+ + V LWD Q ++ F H S
Sbjct: 900 LTCKGHNSWVNSVGFSQDGKMLASG---SDDQTVRLWDISSGQ---CLKTFKGHTSRVRS 953
Query: 61 LVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGD 120
+VF+P +L S + + D+ F H V +A + TG+GD
Sbjct: 954 VVFSPNSLMLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNLDGSMLATGSGDQT 1013
Query: 121 IK-----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPG 162
++ S V+ + +G+ D +++W +S + LY G
Sbjct: 1014 VRLWDISSSQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQG 1072
Score = 38.1 bits (87), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 57/156 (36%), Gaps = 20/156 (12%)
Query: 24 TAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVID 83
T + S + V LWD + KK L H +++ F+P L S + + D
Sbjct: 1130 TLANGSSDQIVRLWD--ISSKKCLY-TLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWD 1186
Query: 84 LRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVK 126
+ H S V + +P +G+ D ++ S V
Sbjct: 1187 ISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVN 1246
Query: 127 CLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPG 162
+ +P +G+ D +++W +S + L+ F G
Sbjct: 1247 SVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQG 1282
Score = 32.3 bits (72), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 38/194 (19%), Positives = 66/194 (34%), Gaps = 23/194 (11%)
Query: 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSL 61
T++ H VF SL+ +G S ++ V LWD + F H S+
Sbjct: 943 TFKGHTSRVRSVVF-SPNSLMLASGSSDQT--VRLWD---ISSGECLYIFQGHTGWVYSV 996
Query: 62 VFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121
F +L + + + D+ F H S V+ + +G+ D +
Sbjct: 997 AFNLDGSMLATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQTV 1056
Query: 122 K-----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEH 164
+ S V+ + P +G D +++W +S + LY G
Sbjct: 1057 RLWDISSGNCLYTLQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYT 1116
Query: 165 ARSSFFKHIGQGVT 178
+ F GVT
Sbjct: 1117 SWVRFLVFSPNGVT 1130
>sp|Q4V7Z1|POC1B_XENLA POC1 centriolar protein homolog B OS=Xenopus laevis GN=poc1b PE=1
SV=1
Length = 468
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 12 DFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLI 71
DF +G+C VA+AG S K +WD + L+Q + H+ G SSL F P L+
Sbjct: 193 DFNQMGTC--VASAGADSTVK---VWDIRM---NKLLQHYQVHNAGVSSLSFHPSGNYLL 244
Query: 72 SAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121
+A G + ++DL + + + H+ PV + + F +GA D +
Sbjct: 245 TASSDGTLKILDLLEGRLIYTLHGHQGPVLSVTFSKSGDQFASGATDAQV 294
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/177 (17%), Positives = 65/177 (36%), Gaps = 26/177 (14%)
Query: 46 ALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAI 105
AL + F H + + F+P + L S+ + + + + + ++ H+ V C+
Sbjct: 9 ALQRHFKGHKDAVTCVDFSPDSKQLASSSADACVMIWNFKPQSRAYKYPGHKEAVTCVQF 68
Query: 106 DPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGDIKV 148
P + + D ++ + V+C+ + F+T + D IK
Sbjct: 69 SPSGHLVASSSKDRTVRLWAPNIKGESTVLKAHTAVVRCVNFSSDGQTFITASDDKSIKA 128
Query: 149 WSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDR 205
W+L L+ S +H G + SC D ++++ L +R
Sbjct: 129 WNLHRQRFLF---------SLTQHTNWVRCARFSPDGRLIASCSDDKTVRIWDLTNR 176
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 73/191 (38%), Gaps = 33/191 (17%)
Query: 28 SSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR 87
SS V +W+ PQ +A + H + + + F+P L+ S+ K + + +
Sbjct: 36 SSADACVMIWN-FKPQSRAY--KYPGHKEAVTCVQFSPSGHLVASSSKDRTVRLWAPNIK 92
Query: 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSP-----------------VKCLAI 130
+ AH + V+C+ + F+T + D IK+ V+C
Sbjct: 93 GESTVLKAHTAVVRCVNFSSDGQTFITASDDKSIKAWNLHRQRFLFSLTQHTNWVRCARF 152
Query: 131 DPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSF--FKHIGQGVTQLHVDGGSRL 188
P + + D +++W L+ + F S++ F +G V
Sbjct: 153 SPDGRLIASCSDDKTVRIWDLTNRLCINTFVDYKGHSNYVDFNQMGTCVA---------- 202
Query: 189 FSCGADGSMKV 199
S GAD ++KV
Sbjct: 203 -SAGADSTVKV 212
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 53/138 (38%), Gaps = 20/138 (14%)
Query: 29 SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRV 88
S+ K V +WD + + FV + ++ + F + SAG + V D+R
Sbjct: 163 SDDKTVRIWDLT---NRLCINTFVDYKGHSNYVDFNQMGTCVASAGADSTVKVWDIRMNK 219
Query: 89 IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAID 131
+ + H + V L+ P + +T + DG +K PV +
Sbjct: 220 LLQHYQVHNAGVSSLSFHPSGNYLLTASSDGTLKILDLLEGRLIYTLHGHQGPVLSVTFS 279
Query: 132 PHEEFFVTGAGDGDIKVW 149
+ F +GA D + VW
Sbjct: 280 KSGDQFASGATDAQVLVW 297
Score = 36.6 bits (83), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 81/219 (36%), Gaps = 36/219 (16%)
Query: 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLV 62
Y H + + F S LVA+ SS+ + V LW P K H +
Sbjct: 56 YPGHKEAVTCVQFSPSGHLVAS---SSKDRTVRLW---APNIKGESTVLKAHTAVVRCVN 109
Query: 63 FAPQHQLLISAGKKGDICVIDL-RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121
F+ Q I+A I +L RQR + S H + V+C P + + D +
Sbjct: 110 FSSDGQTFITASDDKSIKAWNLHRQRFLFS-LTQHTNWVRCARFSPDGRLIASCSDDKTV 168
Query: 122 K--SPVKCLAIDPHEEF---------------FVTGAGDGDIKVWSLSGNHLLYNFPGEH 164
+ L I+ ++ + D +KVW + N LL ++ +
Sbjct: 169 RIWDLTNRLCINTFVDYKGHSNYVDFNQMGTCVASAGADSTVKVWDIRMNKLLQHYQVHN 228
Query: 165 ARSSFFKHIGQGVTQLHV-DGGSRLFSCGADGSMKVRQL 202
A GV+ L G+ L + +DG++K+ L
Sbjct: 229 A----------GVSSLSFHPSGNYLLTASSDGTLKILDL 257
>sp|Q4V7Y7|KTNB1_XENLA Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus laevis
GN=katnb1 PE=1 SV=1
Length = 655
Score = 50.4 bits (119), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 85/218 (38%), Gaps = 37/218 (16%)
Query: 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASS 60
M+ H F S L+ S+S ++ +WD + +++ + H SS
Sbjct: 57 MSLTGHTTPVESVRFNNSEELIVAG---SQSGSLRIWDL---EAAKILRTLMGHKANVSS 110
Query: 61 LVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGD 120
L F P + + S +I + D+R++ R+ H V+CL P ++ + + D
Sbjct: 111 LDFHPYGEFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHS 170
Query: 121 I-----------------KSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGE 163
+ K PV + P+E +G+ D ++ W L L+ GE
Sbjct: 171 VKLWDLTAGKMMAELSEHKGPVNIIEFHPNEYLLASGSADRTVRFWDLEKFQLVGCTEGE 230
Query: 164 H--ARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKV 199
R+ F + DGG +F CG S++V
Sbjct: 231 TIPVRAILFSN----------DGGC-IF-CGGKDSLRV 256
>sp|Q54PE0|PWP2_DICDI Periodic tryptophan protein 2 homolog OS=Dictyostelium discoideum
GN=pwp2 PE=3 SV=1
Length = 922
Score = 50.1 bits (118), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 30/172 (17%)
Query: 51 FVCHDQGASSLVFAP--QHQLLISAGKKGDICVIDL-RQRVIRSRFNAHESPVKCLAIDP 107
F H+ +++ ++P ++ SAG G I DL R R R+ + +++ CLA+DP
Sbjct: 396 FTEHEGPVTAVKYSPVSSQNVVFSAGVDGTIRAFDLVRYRNFRTFVSPNKTQFSCLAVDP 455
Query: 108 HEEFFVTGAGDG--------------DI----KSPVKCLAIDPHEEFFVTGAGDGDIKVW 149
E G+ D DI +SPV LA DP F + + D K+W
Sbjct: 456 SGEIIAAGSLDSFEIYVWSVRTGRLTDILSGHQSPVCELAFDPINPFLASASWDKSCKIW 515
Query: 150 SLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQ 201
++ F R S +H +T + G + DG++++ +
Sbjct: 516 NI--------FEDREIRES-IQHTSDVLTCAYSQDGKKFIVSCLDGTIQIYE 558
Score = 41.2 bits (95), Expect = 0.006, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 51/124 (41%), Gaps = 21/124 (16%)
Query: 54 HDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDP-HEEFF 112
H +++ ++P Q + + G+ G + + + F HE PV + P +
Sbjct: 357 HSYNMNTVAYSPDGQTIATGGEDGKVKIWNTTSGYCYITFTEHEGPVTAVKYSPVSSQNV 416
Query: 113 VTGAG-DGDIK--------------SPVK----CLAIDPHEEFFVTGAGDG-DIKVWSLS 152
V AG DG I+ SP K CLA+DP E G+ D +I VWS+
Sbjct: 417 VFSAGVDGTIRAFDLVRYRNFRTFVSPNKTQFSCLAVDPSGEIIAAGSLDSFEIYVWSVR 476
Query: 153 GNHL 156
L
Sbjct: 477 TGRL 480
>sp|A0DB19|LIS11_PARTE Lissencephaly-1 homolog 1 OS=Paramecium tetraurelia
GN=GSPATT00015130001 PE=3 SV=1
Length = 403
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 17/116 (14%)
Query: 54 HDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFV 113
H G + + F PQ+Q+L SA G I + D H S V CLA DP ++
Sbjct: 104 HRAGVNCVAFHPQYQILGSASDDGSIKLWDYESGHFEKTLKGHTSNVNCLAFDPTGKYIC 163
Query: 114 TGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLS 152
+ + D IK V + H +F ++ + D +IK+W ++
Sbjct: 164 SASSDLSIKIWELKNHTCVKTLIGHEHSVSTVQFSDHGDFILSASRDKNIKLWEVA 219
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 18/95 (18%)
Query: 92 RFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHE 134
+ H + V C+A P + + + DG IK S V CLA DP
Sbjct: 100 KLEGHRAGVNCVAFHPQYQILGSASDDGSIKLWDYESGHFEKTLKGHTSNVNCLAFDPTG 159
Query: 135 EFFVTGAGDGDIKVWSLSGNHLLYNFPG-EHARSS 168
++ + + D IK+W L + + G EH+ S+
Sbjct: 160 KYICSASSDLSIKIWELKNHTCVKTLIGHEHSVST 194
>sp|Q5A7Q3|PRP46_CANAL Pre-mRNA-splicing factor PRP46 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=PRP46 PE=3 SV=1
Length = 389
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 62/150 (41%), Gaps = 19/150 (12%)
Query: 30 ESKNVCLWDSLLPQKKA--LVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR 87
E K++ WD A ++++ H G S+ P+ +L S GK + V D+R R
Sbjct: 148 EDKSLRCWDLERSNSDAGCQIRSYHGHLGGVYSIGLHPELDVLFSGGKDCVVRVWDIRSR 207
Query: 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAI 130
V H + + + D ++ +T + DG I+ ++ +
Sbjct: 208 VEAMTLLGHTNDITSIETDYNDPQVITSSMDGTIRLWDLRKSKTELLITNHSKSIRSMKS 267
Query: 131 DPHEEFFVTGAGDGDIKVWSLSGNHLLYNF 160
P E FV+G +G+IK W L LL F
Sbjct: 268 HPKEATFVSGDSNGEIKQWLLPKGELLNEF 297
>sp|Q9JMJ4|PRP19_RAT Pre-mRNA-processing factor 19 OS=Rattus norvegicus GN=Prpf19 PE=2
SV=2
Length = 504
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 74/190 (38%), Gaps = 31/190 (16%)
Query: 32 KNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRS 91
KNV ++D Q A ++ H + +S+VF P +L+ SA I + +
Sbjct: 244 KNVVVFDKSTEQILATLKG---HTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQ 300
Query: 92 RFNAHESPVKCLAIDPHEEFFVTGAGD-----GDIKS--------------PVKCLAIDP 132
AHES V L++ ++ ++ + D DI++ + C P
Sbjct: 301 VVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHP 360
Query: 133 HEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCG 192
F TG D IK+W L + NFPG H G + + G L +
Sbjct: 361 DGLIFGTGTMDSQIKIWDLKERTNVANFPG---------HSGPITSIAFSENGYYLATAA 411
Query: 193 ADGSMKVRQL 202
D S+K+ L
Sbjct: 412 DDSSVKLWDL 421
>sp|Q99KP6|PRP19_MOUSE Pre-mRNA-processing factor 19 OS=Mus musculus GN=Prpf19 PE=2 SV=1
Length = 504
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 74/190 (38%), Gaps = 31/190 (16%)
Query: 32 KNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRS 91
KNV ++D Q A ++ H + +S+VF P +L+ SA I + +
Sbjct: 244 KNVVVFDKSTEQILATLKG---HTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQ 300
Query: 92 RFNAHESPVKCLAIDPHEEFFVTGAGD-----GDIKS--------------PVKCLAIDP 132
AHES V L++ ++ ++ + D DI++ + C P
Sbjct: 301 VVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHP 360
Query: 133 HEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCG 192
F TG D IK+W L + NFPG H G + + G L +
Sbjct: 361 DGLIFGTGTMDSQIKIWDLKERTNVANFPG---------HSGPITSIAFSENGYYLATAA 411
Query: 193 ADGSMKVRQL 202
D S+K+ L
Sbjct: 412 DDSSVKLWDL 421
>sp|Q7T0P4|POC1A_XENLA POC1 centriolar protein homolog A OS=Xenopus laevis GN=poc1a PE=1
SV=2
Length = 441
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 53/139 (38%), Gaps = 20/139 (14%)
Query: 28 SSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR 87
+S+ K + LWD + +Q+F H + + F P + +A + V D+R
Sbjct: 162 ASDDKTIKLWDKT---SRECIQSFCEHGGFVNFVDFHPSGTCIAAAATDNTVKVWDIRMN 218
Query: 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAI 130
+ + H V L+ P + +T + D +K PV C+
Sbjct: 219 KLIQHYQVHSGVVNSLSFHPSGNYLITASNDSTLKVLDLLEGRLLYTLHGHQGPVTCVKF 278
Query: 131 DPHEEFFVTGAGDGDIKVW 149
+FF +G D + VW
Sbjct: 279 SREGDFFASGGSDEQVMVW 297
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 8/110 (7%)
Query: 12 DFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLI 71
DF G+C A ++ V +WD + + L+Q + H +SL F P LI
Sbjct: 193 DFHPSGTCIAAAATDNT-----VKVWDIRMNK---LIQHYQVHSGVVNSLSFHPSGNYLI 244
Query: 72 SAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121
+A + V+DL + + + H+ PV C+ +FF +G D +
Sbjct: 245 TASNDSTLKVLDLLEGRLLYTLHGHQGPVTCVKFSREGDFFASGGSDEQV 294
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 62/163 (38%), Gaps = 23/163 (14%)
Query: 15 FLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG 74
F S L+A+A S K V LW +P K AF H S+ F+ Q L++A
Sbjct: 68 FSPSGHLIASA---SRDKTVRLW---VPSVKGESTAFKAHTGTVRSVSFSGDGQSLVTAS 121
Query: 75 KKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI----KSPVKCLA- 129
I V + ++ N H + V+C P V+ + D I K+ +C+
Sbjct: 122 DDKTIKVWTVHRQKFLFSLNQHINWVRCAKFSPDGRLIVSASDDKTIKLWDKTSRECIQS 181
Query: 130 ------------IDPHEEFFVTGAGDGDIKVWSLSGNHLLYNF 160
P A D +KVW + N L+ ++
Sbjct: 182 FCEHGGFVNFVDFHPSGTCIAAAATDNTVKVWDIRMNKLIQHY 224
>sp|Q6ZMW3|EMAL6_HUMAN Echinoderm microtubule-associated protein-like 6 OS=Homo sapiens
GN=EML6 PE=2 SV=2
Length = 1958
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 74/175 (42%), Gaps = 32/175 (18%)
Query: 20 SLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG--KKG 77
+LVAT G + +C+WDS Q +L++ H G + L F Q L S G K
Sbjct: 74 TLVAT-GQVGKEPYICIWDSYNVQTVSLLKD--VHTHGVACLAFDSDGQRLASVGLDAKN 130
Query: 78 DICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAG-------------------- 117
+C+ D R+ + + H + ++ DP++ V G
Sbjct: 131 TVCIWDWRKGKLLASATGHSDRIFDISWDPYQPNRVVSCGVKHIKFWTLCGNALTAKRGI 190
Query: 118 ---DGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSF 169
GD+++ + CLA E+ +GA +GDI VW G +L+ G H+ F
Sbjct: 191 FGKTGDLQT-ILCLAC-AKEDITYSGALNGDIYVW--KGLNLVRTIQGAHSAGIF 241
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 118 DGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHA 165
DG ++ + LA P ++ F++ + DG ++W L+ LL HA
Sbjct: 1683 DGHMEGEIWGLATHPSKDLFISASNDGTARIWDLADKKLLNKVSLGHA 1730
Score = 32.7 bits (73), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 12/93 (12%)
Query: 119 GDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHA-RSSFFKHIGQGV 177
G + + LA+ P + VTG+ D +++WSL+ + L+ E A RS F
Sbjct: 322 GHCEGELWALALHPKKPLAVTGSDDRSVRLWSLADHALIARCNMEEAVRSVAFS------ 375
Query: 178 TQLHVDGGSRLFSCGADGSMKVRQLPDRDAVVH 210
GS+L DGS V ++ D VVH
Sbjct: 376 -----PDGSQLALGMKDGSFIVLRVRDMTEVVH 403
>sp|Q5RD06|POC1B_PONAB POC1 centriolar protein homolog B OS=Pongo abelii GN=POC1B PE=2
SV=1
Length = 451
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 57/145 (39%), Gaps = 20/145 (13%)
Query: 29 SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRV 88
SE K + +WD+ K V F A+ + F P + SAG + V D+R
Sbjct: 163 SEDKTIKIWDT---TNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNK 219
Query: 89 IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAID 131
+ + H V C++ P + + VT + DG +K PV ++
Sbjct: 220 LLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFS 279
Query: 132 PHEEFFVTGAGDGDIKVWSLSGNHL 156
E F +G D + +W + + L
Sbjct: 280 KGGELFASGGADTQVLLWRTNFDEL 304
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 70/186 (37%), Gaps = 34/186 (18%)
Query: 37 WDSLL------PQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIR 90
WD+ L P +A +V H +S+ F+P LL SA + + + +R
Sbjct: 38 WDTFLMLWNFKPHARAY--RYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKF 95
Query: 91 SRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPH 133
S F AH +PV+ + +F T + D IK V+C P
Sbjct: 96 SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPD 155
Query: 134 EEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGA 193
V+ + D IK+W + + NF ++F G + S G+
Sbjct: 156 GRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTC---------IASAGS 206
Query: 194 DGSMKV 199
D ++KV
Sbjct: 207 DQTVKV 212
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 74/209 (35%), Gaps = 32/209 (15%)
Query: 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLV 62
++ H F +ATA SE K++ +W S+ Q+ + + H
Sbjct: 98 FKAHTAPVRSVDFSADGQFLATA---SEDKSIKVW-SMYRQR--FLYSLYRHTHWVRCAK 151
Query: 63 FAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
F+P +L++S + I + D + + F+ + +P + D +K
Sbjct: 152 FSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVK 211
Query: 123 -----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHA 165
V C++ P + + VT + DG +K+ L L+Y G
Sbjct: 212 VWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQG--- 268
Query: 166 RSSFFKHIGQGVTQLHVDGGSRLFSCGAD 194
H G T GG S GAD
Sbjct: 269 ------HTGPVFTVSFSKGGELFASGGAD 291
>sp|A0CH87|LIS12_PARTE Lissencephaly-1 homolog 2 OS=Paramecium tetraurelia
GN=GSPATT00007594001 PE=3 SV=1
Length = 403
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 17/115 (14%)
Query: 54 HDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFV 113
H G + + F PQ+Q+L SA G I + D H S V CLA DP ++
Sbjct: 104 HRAGVNCVAFHPQYQILGSASDDGSIKLWDYESGHFEKTLKGHTSNVNCLAFDPTGKYIC 163
Query: 114 TGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSL 151
+ + D IK V + H +F ++ + D IK+W +
Sbjct: 164 SASSDLSIKLWELKNHTCVKTLIGHEHSVSTVQFSDHGDFILSASRDKSIKLWEV 218
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 51/129 (39%), Gaps = 28/129 (21%)
Query: 92 RFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHE 134
+ H + V C+A P + + + DG IK S V CLA DP
Sbjct: 100 KLEGHRAGVNCVAFHPQYQILGSASDDGSIKLWDYESGHFEKTLKGHTSNVNCLAFDPTG 159
Query: 135 EFFVTGAGDGDIKVWSLSGNHLLYNFPG-EHARSSFFKHIGQGVTQLHVDGGSRLFSCGA 193
++ + + D IK+W L + + G EH+ S T D G + S
Sbjct: 160 KYICSASSDLSIKLWELKNHTCVKTLIGHEHSVS----------TVQFSDHGDFILSASR 209
Query: 194 DGSMKVRQL 202
D S+K+ ++
Sbjct: 210 DKSIKLWEV 218
>sp|Q08E38|PRP19_BOVIN Pre-mRNA-processing factor 19 OS=Bos taurus GN=PRPF19 PE=2 SV=1
Length = 504
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 74/190 (38%), Gaps = 31/190 (16%)
Query: 32 KNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRS 91
KNV ++D Q A ++ H + +S+VF P +L+ SA I + +
Sbjct: 244 KNVVVFDKSSEQILATLKG---HTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASCVQ 300
Query: 92 RFNAHESPVKCLAIDPHEEFFVTGAGD-----GDIKS--------------PVKCLAIDP 132
AHES V L++ ++ ++ + D DI++ + C P
Sbjct: 301 VVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHP 360
Query: 133 HEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCG 192
F TG D IK+W L + NFPG H G + + G L +
Sbjct: 361 DGLIFGTGTMDSQIKIWDLKERTNVANFPG---------HSGPITSIAFSENGYYLATAA 411
Query: 193 ADGSMKVRQL 202
D S+K+ L
Sbjct: 412 DDSSVKLWDL 421
>sp|Q6FJZ9|PRP46_CANGA Pre-mRNA-splicing factor PRP46 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=PRP46 PE=3 SV=1
Length = 427
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 27/152 (17%)
Query: 29 SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRV 88
SE K V WD +K ++ + H G ++ P ++++AG+ + V D+R R+
Sbjct: 177 SEDKTVKCWDL---EKNTAIRNYHGHLSGVHTVDIHPTVDVVVTAGRDSVVKVWDIRTRL 233
Query: 89 IRSRFNAHESP---VKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCL 128
H+ P V+CL +DP ++ + D I+ V+ +
Sbjct: 234 PVMTLPGHKGPITKVRCLPVDPQ---VISSSVDASIRLWDLVAGKSMKVLTHHQRTVRDI 290
Query: 129 AIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNF 160
++ P EF A DI+ W L LL NF
Sbjct: 291 SVHP-SEFSFASACTNDIRSWLLPKGELLTNF 321
Score = 34.3 bits (77), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 18/88 (20%)
Query: 93 FNAHESPVKCLAIDP-HEEFFVTGAGDGDIK-----------------SPVKCLAIDPHE 134
+ H V+C+A+D E+F TG+ D IK V+ LAI
Sbjct: 111 IHGHHGWVRCIAMDKVDNEWFATGSNDKTIKIWNLASGKLKVTLKAHDMTVRDLAISNRH 170
Query: 135 EFFVTGAGDGDIKVWSLSGNHLLYNFPG 162
+ + + D +K W L N + N+ G
Sbjct: 171 PYMFSVSEDKTVKCWDLEKNTAIRNYHG 198
Score = 34.3 bits (77), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 56/154 (36%), Gaps = 22/154 (14%)
Query: 79 ICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------- 122
I + +L ++ AH+ V+ LAI + + + D +K
Sbjct: 140 IKIWNLASGKLKVTLKAHDMTVRDLAISNRHPYMFSVSEDKTVKCWDLEKNTAIRNYHGH 199
Query: 123 -SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFK--HIGQGVTQ 179
S V + I P + VT D +KVW + + PG + + + V
Sbjct: 200 LSGVHTVDIHPTVDVVVTAGRDSVVKVWDIRTRLPVMTLPGHKGPITKVRCLPVDPQVIS 259
Query: 180 LHVDGGSRLFSCGADGSMKV---RQLPDRDAVVH 210
VD RL+ A SMKV Q RD VH
Sbjct: 260 SSVDASIRLWDLVAGKSMKVLTHHQRTVRDISVH 293
>sp|Q6BU94|PRP46_DEBHA Pre-mRNA-splicing factor PRP46 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=PRP46 PE=3 SV=2
Length = 417
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 75/192 (39%), Gaps = 32/192 (16%)
Query: 29 SESKNVCLWDSLLPQKKA--LVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQ 86
SE K V WD + ++ + H G ++ P+ LL + G+ I V DLR
Sbjct: 183 SEDKTVKCWDLERTNSSSGCQIRNYHGHVGGIYAMALHPELDLLFTGGRDSVIRVWDLRS 242
Query: 87 RVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLA 129
R + H S + +A + +T + D I+ ++ +A
Sbjct: 243 RTEIMVLSGHRSDITSIASQIGDPQIITSSMDATIRLWDIRKATTQLALTHHSKSIRSMA 302
Query: 130 IDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQG--VTQLHVD-GGS 186
+ P E +G G++K W L G LL + F H G+ + L ++ +
Sbjct: 303 MHPQEMTMCSGDTSGNLKEWLLPGGELL----------NEFGHSGENKIINTLSINPSNN 352
Query: 187 RLFSCGADGSMK 198
LFS DG M+
Sbjct: 353 TLFSGYDDGRME 364
Score = 37.4 bits (85), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 63/146 (43%), Gaps = 24/146 (16%)
Query: 83 DLRQRVIRSRFNAHESPVKCLAIDP-HEEFFVTGAGDGDIK-----------------SP 124
D R +++R AH+ V+ +DP ++FVTG+ D IK
Sbjct: 107 DSRWKLLRVMAGAHQGWVRSCTVDPVTNKWFVTGSSDSTIKIWDLASSNLKATITGHIMG 166
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG 184
V+ LA+ + +G+ D +K W L + + G R ++ H+G G+ + +
Sbjct: 167 VRSLAVSSRYPYLFSGSEDKTVKCWDLERTN---SSSGCQIR-NYHGHVG-GIYAMALHP 221
Query: 185 G-SRLFSCGADGSMKVRQLPDRDAVV 209
LF+ G D ++V L R ++
Sbjct: 222 ELDLLFTGGRDSVIRVWDLRSRTEIM 247
>sp|Q8TC44|POC1B_HUMAN POC1 centriolar protein homolog B OS=Homo sapiens GN=POC1B PE=1
SV=1
Length = 478
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 70/186 (37%), Gaps = 34/186 (18%)
Query: 37 WDSLL------PQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIR 90
WD+ L P +A +V H +S+ F+P LL SA + + + +R
Sbjct: 38 WDTFLMLWNFKPHARAY--RYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKF 95
Query: 91 SRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPH 133
S F AH +PV+ + +F T + D IK V+C P
Sbjct: 96 SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPD 155
Query: 134 EEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGA 193
V+ + D IK+W + + NF ++F G + S G+
Sbjct: 156 GRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTC---------IASAGS 206
Query: 194 DGSMKV 199
D ++KV
Sbjct: 207 DQTVKV 212
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 56/145 (38%), Gaps = 20/145 (13%)
Query: 29 SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRV 88
SE K + +WD+ K V F A+ + F P + SAG + V D+R
Sbjct: 163 SEDKTIKIWDT---TNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNK 219
Query: 89 IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAID 131
+ + H V C++ P + +T + DG +K PV ++
Sbjct: 220 LLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFS 279
Query: 132 PHEEFFVTGAGDGDIKVWSLSGNHL 156
E F +G D + +W + + L
Sbjct: 280 KGGELFASGGADTQVLLWRTNFDEL 304
>sp|O22466|MSI1_SOLLC WD-40 repeat-containing protein MSI1 OS=Solanum lycopersicum
GN=MSI1 PE=2 SV=1
Length = 424
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 8/102 (7%)
Query: 29 SESKNVCLWD-SLLPQKKAL--VQAFVCHDQGASSLVFAPQHQLLI-SAGKKGDICVIDL 84
S+ ++CLWD + P+ KAL +Q F H+ + + +H+ L S G + V DL
Sbjct: 198 SDDSHICLWDINATPKNKALEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLHVWDL 257
Query: 85 RQRVIRSRFN---AHESPVKCLAIDPHEEFFV-TGAGDGDIK 122
R + AH+S V CLA +P E+ V TG+ D +K
Sbjct: 258 RTPSVTKPIQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVK 299
>sp|Q61011|GBB3_MOUSE Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3
OS=Mus musculus GN=Gnb3 PE=1 SV=2
Length = 340
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 7/108 (6%)
Query: 15 FLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG 74
FL ++V ++G ++ LWD Q+K + FV H SL +P ++L IS
Sbjct: 151 FLDDNNIVTSSGDTT----CALWDIETGQQKTV---FVGHTGDCMSLAVSPDYKLFISGA 203
Query: 75 KKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
+ D+R+ R F HES + + P+ E TG+ D +
Sbjct: 204 CDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCR 251
Score = 35.4 bits (80), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 69/191 (36%), Gaps = 29/191 (15%)
Query: 28 SSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR 87
+S+ + +WD+ K V A + +AP + G + +L+ R
Sbjct: 73 ASQDGKLIVWDTYTTNK---VHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYNLKSR 129
Query: 88 ----VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDG-----DIKS------------PVK 126
+ +AH + C + VT +GD DI++
Sbjct: 130 EGNVKVSRELSAHTGYLSCCRF-LDDNNIVTSSGDTTCALWDIETGQQKTVFVGHTGDCM 188
Query: 127 CLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSS---FFKHIGQGVTQLHVD 183
LA+ P + F++GA D K+W + F G + + FF + G+ + D
Sbjct: 189 SLAVSPDYKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPN-GEAICTGSDD 247
Query: 184 GGSRLFSCGAD 194
RLF AD
Sbjct: 248 ASCRLFDLRAD 258
>sp|P52287|GBB3_RAT Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3
OS=Rattus norvegicus GN=Gnb3 PE=1 SV=1
Length = 340
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 7/108 (6%)
Query: 15 FLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG 74
FL ++V ++G ++ LWD Q+K + FV H SL +P ++L IS
Sbjct: 151 FLDDNNIVTSSGDTT----CALWDIETGQQKTV---FVGHTGDCMSLAVSPDYKLFISGA 203
Query: 75 KKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
+ D+R+ R F HES + + P+ E TG+ D +
Sbjct: 204 CDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCR 251
Score = 34.7 bits (78), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 68/191 (35%), Gaps = 29/191 (15%)
Query: 28 SSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR 87
+S+ + +WD+ K V A + +AP + G + L+ R
Sbjct: 73 ASQDGKLIVWDTYTTNK---VHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYSLKSR 129
Query: 88 ----VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDG-----DIKS------------PVK 126
+ +AH + C + VT +GD DI++
Sbjct: 130 EGNVKVSRELSAHTGYLSCCRF-LDDNNIVTSSGDTTCALWDIETGQQKTVFVGHTGDCM 188
Query: 127 CLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSS---FFKHIGQGVTQLHVD 183
LA+ P + F++GA D K+W + F G + + FF + G+ + D
Sbjct: 189 SLAVSPDYKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPN-GEAICTGSDD 247
Query: 184 GGSRLFSCGAD 194
RLF AD
Sbjct: 248 ASCRLFDLRAD 258
>sp|Q9UMS4|PRP19_HUMAN Pre-mRNA-processing factor 19 OS=Homo sapiens GN=PRPF19 PE=1 SV=1
Length = 504
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 73/190 (38%), Gaps = 31/190 (16%)
Query: 32 KNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRS 91
KNV ++D Q A ++ H + +S+VF P L+ SA I + +
Sbjct: 244 KNVVVFDKSSEQILATLKG---HTKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQ 300
Query: 92 RFNAHESPVKCLAIDPHEEFFVTGAGD-----GDIKS--------------PVKCLAIDP 132
AHES V L++ ++ ++ + D DI++ + C P
Sbjct: 301 VVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHP 360
Query: 133 HEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCG 192
F TG D IK+W L + NFPG H G + + G L +
Sbjct: 361 DGLIFGTGTMDSQIKIWDLKERTNVANFPG---------HSGPITSIAFSENGYYLATAA 411
Query: 193 ADGSMKVRQL 202
D S+K+ L
Sbjct: 412 DDSSVKLWDL 421
>sp|Q2TBP4|POC1A_BOVIN POC1 centriolar protein homolog A OS=Bos taurus GN=POC1A PE=2 SV=1
Length = 407
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 53/139 (38%), Gaps = 20/139 (14%)
Query: 28 SSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR 87
+S+ K V LWD + V ++ H + + F P + +AG + V D+R
Sbjct: 163 ASDDKTVKLWDKT---SRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTH 219
Query: 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAI 130
+ + H + V L+ P + VT + D +K P +A
Sbjct: 220 RLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAF 279
Query: 131 DPHEEFFVTGAGDGDIKVW 149
E+F +G D + VW
Sbjct: 280 SRTGEYFASGGSDEQVMVW 298
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 8/110 (7%)
Query: 12 DFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLI 71
DF G+C +A AG + K +WD + L+Q + H ++L F P L+
Sbjct: 194 DFHPSGTC--IAAAGMDNTVK---VWDV---RTHRLLQHYQLHSAAVNALSFHPSGNYLV 245
Query: 72 SAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121
+A + ++DL + + + H+ P +A E+F +G D +
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQV 295
Score = 35.8 bits (81), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 60/152 (39%), Gaps = 22/152 (14%)
Query: 28 SSESKNVCL--WDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLR 85
+S S + CL W + PQ +A F H + + F+P LL S + + +
Sbjct: 35 ASGSMDSCLMVWH-MKPQTRAY--RFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPN 91
Query: 86 QRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCL 128
+ + F AH + V+ + + FVT + D +K + V+C
Sbjct: 92 VKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCA 151
Query: 129 AIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNF 160
P V+ + D +K+W + ++++
Sbjct: 152 KFSPDGRLIVSASDDKTVKLWDKTSRECVHSY 183
>sp|Q6CKE8|PRP46_KLULA Pre-mRNA-splicing factor PRP46 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=PRP46 PE=3 SV=1
Length = 434
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 65/158 (41%), Gaps = 27/158 (17%)
Query: 28 SSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR 87
+SE K V WD ++ ++ F H G ++ P ++ +AG+ + + D+R R
Sbjct: 183 ASEDKLVKCWDL---ERNTAIRDFHGHLSGVHTVDVHPSLDIIATAGRDAVVRLWDIRSR 239
Query: 88 VIRSRFNAHESP---VKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKC 127
H+SP VKCL +DP ++ +GD ++ ++
Sbjct: 240 SEIMVLPGHKSPINKVKCLPVDPQ---IISCSGDATVRLWDIIAGKASKVLTHHSRNIRD 296
Query: 128 LAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHA 165
L + P EF D++ W L LL NF ++
Sbjct: 297 LTLHP-AEFSFASVSTNDVRSWKLPEGQLLTNFQSQNT 333
Score = 37.0 bits (84), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 18/88 (20%)
Query: 93 FNAHESPVKCLAIDP-HEEFFVTGAGDGDIK-----------------SPVKCLAIDPHE 134
N H V+C+ +DP E+F TG+ D IK V+ +AI
Sbjct: 118 INGHTGWVRCVCVDPVDNEWFATGSNDTTIKIWDLAAGKLKITLIGHVMSVRDIAISKRH 177
Query: 135 EFFVTGAGDGDIKVWSLSGNHLLYNFPG 162
+ + + D +K W L N + +F G
Sbjct: 178 PYMFSASEDKLVKCWDLERNTAIRDFHG 205
>sp|O22468|MSI2_ARATH WD-40 repeat-containing protein MSI2 OS=Arabidopsis thaliana
GN=MSI2 PE=2 SV=1
Length = 415
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 24/148 (16%)
Query: 29 SESKNVCLWD-SLLPQKKALVQAFVC--HDQGASSLVFAPQHQLLI-SAGKKGDICVIDL 84
S+ + +CLWD S PQ K L FV H+ + + + +++ L SAG+ G + + D
Sbjct: 188 SQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFGSAGEDGRLVIWDT 247
Query: 85 RQRVIRSRFNAHESPVKCLAIDPHEEF-FVTGAGDGDI--------KSPVKCLA------ 129
R ++ + HE V L+ +P E+ T + D + +P+ ++
Sbjct: 248 RTNQMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAPLHVMSSHEGEV 307
Query: 130 ----IDP-HEEFFVTGAGDGDIKVWSLS 152
DP HE + D + VW L+
Sbjct: 308 FQVEWDPNHETVLASSGEDRRLMVWDLN 335
>sp|P78706|RCO1_NEUCR Transcriptional repressor rco-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=rco-1 PE=4 SV=2
Length = 604
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 16/110 (14%)
Query: 60 SLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDG 119
S+ F+P + L + + I V D++ R IR+ F+ HE + L +G+GD
Sbjct: 349 SVCFSPDGKYLATGAEDKLIRVWDIQSRTIRNTFHGHEQDIYSLDFSRDGRTIASGSGDR 408
Query: 120 ----------------DIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSG 153
I+ V +AI P ++F G+ D ++VW + G
Sbjct: 409 TVRLWDIETGQNTSVLSIEDGVTTVAISPDKQFVAAGSLDKSVRVWDMRG 458
Score = 35.4 bits (80), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 56/143 (39%), Gaps = 23/143 (16%)
Query: 29 SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRV 88
+E K + +WD Q + + F H+Q SL F+ + + S + + D+
Sbjct: 363 AEDKLIRVWDI---QSRTIRNTFHGHEQDIYSLDFSRDGRTIASGSGDRTVRLWDIETGQ 419
Query: 89 IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI-------------------KSPVKCLA 129
S + E V +AI P ++F G+ D + K V +A
Sbjct: 420 NTSVLSI-EDGVTTVAISPDKQFVAAGSLDKSVRVWDMRGYLAERLEGPDGHKDSVYSVA 478
Query: 130 IDPHEEFFVTGAGDGDIKVWSLS 152
P V+G+ D IK+W LS
Sbjct: 479 FSPDGRNLVSGSLDKTIKMWELS 501
>sp|P25635|PWP2_YEAST Periodic tryptophan protein 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PWP2 PE=1 SV=2
Length = 923
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 66/172 (38%), Gaps = 25/172 (14%)
Query: 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASS 60
+ Q H T+ + S V TA SE + +WD + F H ++
Sbjct: 339 LKQQGHFDSTNSLAYSPDGSRVVTA---SEDGKIKVWD---ITSGFCLATFEEHTSSVTA 392
Query: 61 LVFAPQHQLLISAGKKGDICVIDL-RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDG 119
+ FA + Q++ S+ G + DL R R R+ CLA+DP E G+ D
Sbjct: 393 VQFAKRGQVMFSSSLDGTVRAWDLIRYRNFRTFTGTERIQFNCLAVDPSGEVVCAGSLDN 452
Query: 120 -DI-----------------KSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSG 153
DI + PV CL+ + + D I++WS+ G
Sbjct: 453 FDIHVWSVQTGQLLDALSGHEGPVSCLSFSQENSVLASASWDKTIRIWSIFG 504
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 55/137 (40%), Gaps = 23/137 (16%)
Query: 49 QAFVCHDQG----ASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLA 104
++++ QG +SL ++P +++A + G I V D+ + F H S V +
Sbjct: 335 ESYILKQQGHFDSTNSLAYSPDGSRVVTASEDGKIKVWDITSGFCLATFEEHTSSVTAVQ 394
Query: 105 IDPHEEFFVTGAGDGDIKS------------------PVKCLAIDPHEEFFVTGAGDG-D 145
+ + + DG +++ CLA+DP E G+ D D
Sbjct: 395 FAKRGQVMFSSSLDGTVRAWDLIRYRNFRTFTGTERIQFNCLAVDPSGEVVCAGSLDNFD 454
Query: 146 IKVWSLSGNHLLYNFPG 162
I VWS+ LL G
Sbjct: 455 IHVWSVQTGQLLDALSG 471
Score = 34.3 bits (77), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 62/172 (36%), Gaps = 31/172 (18%)
Query: 51 FVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEE 110
F + + F P +LL G+ + DL + + + ++PV ++++ E
Sbjct: 256 FYANQAKVKCVTFHPATRLLAVGFTSGEFRLYDLPDFTLIQQLSMGQNPVNTVSVNQTGE 315
Query: 111 FFVTGAG-------------------DGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSL 151
+ G+ G S LA P VT + DG IKVW +
Sbjct: 316 WLAFGSSKLGQLLVYEWQSESYILKQQGHFDS-TNSLAYSPDGSRVVTASEDGKIKVWDI 374
Query: 152 SGNHLLYNFPGEHARSSFFKHIGQGVTQLH-VDGGSRLFSCGADGSMKVRQL 202
+ L F EH S VT + G +FS DG+++ L
Sbjct: 375 TSGFCLATFE-EHTSS---------VTAVQFAKRGQVMFSSSLDGTVRAWDL 416
>sp|O61585|KTNB1_STRPU Katanin p80 WD40 repeat-containing subunit B1 OS=Strongylocentrotus
purpuratus GN=KATNB1 PE=1 SV=1
Length = 690
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/147 (19%), Positives = 60/147 (40%), Gaps = 18/147 (12%)
Query: 48 VQAFVCHDQGASSLVFAPQH-QLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAID 106
+Q V H + L P +++++ G+ + + + ++ + H SPV + +
Sbjct: 9 LQELVAHSSNVNCLALGPMSGRVMVTGGEDKKVNLWAVGKQNCIISLSGHTSPVDSVKFN 68
Query: 107 PHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGDIKVW 149
EE V G+ G +K + ++C+ P EF +G+ D ++K+W
Sbjct: 69 SSEELVVAGSQSGTMKIYDLEPAKIVRTLTGHRNSIRCMDFHPFGEFVASGSTDTNVKLW 128
Query: 150 SLSGNHLLYNFPGEHARSSFFKHIGQG 176
+ +Y + G + + K G
Sbjct: 129 DVRRKGCIYTYKGHSDQVNMIKFSPDG 155
Score = 35.0 bits (79), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 68/179 (37%), Gaps = 23/179 (12%)
Query: 12 DFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLI 71
D V S + AG S+S + ++D L P K +V+ H + F P + +
Sbjct: 63 DSVKFNSSEELVVAG--SQSGTMKIYD-LEPAK--IVRTLTGHRNSIRCMDFHPFGEFVA 117
Query: 72 SAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--------- 122
S ++ + D+R++ + H V + P ++ VT + D IK
Sbjct: 118 SGSTDTNVKLWDVRRKGCIYTYKGHSDQVNMIKFSPDGKWLVTASEDTTIKLWDLTMGKL 177
Query: 123 --------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNF-PGEHARSSFFKH 172
V + P+E +G+ D ++ W L L+ + PG A S H
Sbjct: 178 FQEFKNHTGGVTGIEFHPNEFLLASGSSDRTVQFWDLETFQLVSSTSPGASAVRSISFH 236
>sp|P79147|GBB3_CANFA Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3
OS=Canis familiaris GN=GNB3 PE=2 SV=1
Length = 340
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 7/108 (6%)
Query: 15 FLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG 74
FL ++V ++G ++ LWD Q+K + FV H SL +P +L IS
Sbjct: 151 FLDDNNIVTSSGDTT----CALWDIETGQQKTV---FVGHTGDCMSLAVSPDFKLFISGA 203
Query: 75 KKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
+ D+R+ R F HES + + P+ E TG+ D +
Sbjct: 204 CDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCR 251
Score = 33.9 bits (76), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 68/191 (35%), Gaps = 29/191 (15%)
Query: 28 SSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR 87
+S+ + +WD+ K V A + +AP + G + L+ R
Sbjct: 73 ASQDGKLIVWDTYTTNK---VHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYSLKSR 129
Query: 88 ----VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDG-----DIKS------------PVK 126
+ +AH + C + VT +GD DI++
Sbjct: 130 EGNVKVSRELSAHTGYLSCCRF-LDDNNIVTSSGDTTCALWDIETGQQKTVFVGHTGDCM 188
Query: 127 CLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSS---FFKHIGQGVTQLHVD 183
LA+ P + F++GA D K+W + F G + + FF + G+ + D
Sbjct: 189 SLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPN-GEAICTGSDD 247
Query: 184 GGSRLFSCGAD 194
RLF AD
Sbjct: 248 ASCRLFDLRAD 258
>sp|Q54KL5|WDR5_DICDI WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum
GN=wdr5 PE=3 SV=1
Length = 335
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/171 (19%), Positives = 68/171 (39%), Gaps = 24/171 (14%)
Query: 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSL 61
T + H + SD + L+ +A S+ K + +WD + +V+ H + +
Sbjct: 83 TLEGHKEGISDIAWSQDSKLICSA---SDDKTIKIWD---VESGKMVKTLKGHKEYVFGV 136
Query: 62 VFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121
F PQ L++S ++ + D+ +AH PV + + V+G+ DG +
Sbjct: 137 SFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTV 196
Query: 122 K------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGN 154
+ V + P+ +F + G D +++WS + N
Sbjct: 197 RIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNN 247
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 63/157 (40%), Gaps = 20/157 (12%)
Query: 54 HDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFV 113
H +G S + ++ +L+ SA I + D+ + H+ V ++ +P V
Sbjct: 87 HKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIV 146
Query: 114 TGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHL 156
+G+ D +++ PV + + V+G+ DG +++W + L
Sbjct: 147 SGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQL 206
Query: 157 LYNFPGEHARS-SF--FKHIGQGVTQLHVDGGSRLFS 190
L E + SF F G+ V +D RL+S
Sbjct: 207 LNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWS 243
>sp|Q42384|PRL1_ARATH Protein pleiotropic regulatory locus 1 OS=Arabidopsis thaliana
GN=PRL1 PE=1 SV=1
Length = 486
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 22/141 (15%)
Query: 29 SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQ-R 87
S + + +WD L H + L + +H + SAG + DL Q +
Sbjct: 195 SADRTIKIWDVAT---GVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNK 251
Query: 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDG-----DIKSPVKCLAID----------- 131
VIRS ++ H S V CLA+ P + +TG D DI++ ++ A+
Sbjct: 252 VIRS-YHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFT 310
Query: 132 -PHEEFFVTGAGDGDIKVWSL 151
P + VTG+ D IK W L
Sbjct: 311 RPTDPQVVTGSHDTTIKFWDL 331
Score = 39.3 bits (90), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 72/197 (36%), Gaps = 24/197 (12%)
Query: 33 NVC-LWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRS 91
+VC +WD + K + A HD S+ P +++ I DLR S
Sbjct: 282 SVCRVWDI---RTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMS 338
Query: 92 RFNAHESPVKCLAIDPHEEFFVTGAGDG-----------------DIKSPVKCLAIDPHE 134
H+ V+ + + P E F + + D K+ + +A++ +
Sbjct: 339 TLTHHKKSVRAMTLHPKENAFASASADNTKKFSLPKGEFCHNMLSQQKTIINAMAVN-ED 397
Query: 135 EFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGAD 194
VTG +G I W H S G + + GSRL +C AD
Sbjct: 398 GVMVTGGDNGSIWFWDWKSGHSFQQSETIVQPGSLESEAGI-YAACYDNTGSRLVTCEAD 456
Query: 195 GSMKVRQLPDRDAVVHT 211
++K+ + D +A T
Sbjct: 457 KTIKMWKE-DENATPET 472
Score = 37.0 bits (84), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 14/91 (15%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPG--EHARSSFFKHIGQGVTQLHV 182
V+ +A DP E+F TG+ D IK+W ++ L G E R G V+ H
Sbjct: 179 VRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVR-------GLAVSNRH- 230
Query: 183 DGGSRLFSCGADGSMKVRQLPDRDAVVHTLY 213
+ +FS G D +K L +++ V+ + +
Sbjct: 231 ---TYMFSAGDDKQVKCWDL-EQNKVIRSYH 257
Score = 35.4 bits (80), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 17/80 (21%)
Query: 100 VKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAG 142
V+ +A DP E+F TG+ D IK V+ LA+ + +
Sbjct: 179 VRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGD 238
Query: 143 DGDIKVWSLSGNHLLYNFPG 162
D +K W L N ++ ++ G
Sbjct: 239 DKQVKCWDLEQNKVIRSYHG 258
Score = 34.7 bits (78), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/120 (20%), Positives = 44/120 (36%), Gaps = 17/120 (14%)
Query: 60 SLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDG 119
S+ F P ++ + I + D+ V++ H V+ LA+ + + D
Sbjct: 181 SVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDK 240
Query: 120 DIK-----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPG 162
+K S V CLA+ P + +TG D +VW + ++ G
Sbjct: 241 QVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSG 300
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,084,085
Number of Sequences: 539616
Number of extensions: 3635113
Number of successful extensions: 11192
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 272
Number of HSP's successfully gapped in prelim test: 477
Number of HSP's that attempted gapping in prelim test: 8845
Number of HSP's gapped (non-prelim): 2366
length of query: 213
length of database: 191,569,459
effective HSP length: 113
effective length of query: 100
effective length of database: 130,592,851
effective search space: 13059285100
effective search space used: 13059285100
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)