Query psy7433
Match_columns 213
No_of_seqs 358 out of 1398
Neff 11.5
Searched_HMMs 29240
Date Fri Aug 16 18:12:51 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7433.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7433hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 100.0 1.7E-38 5.7E-43 233.2 26.9 200 2-207 8-262 (304)
2 1vyh_C Platelet-activating fac 100.0 8.3E-38 2.8E-42 238.3 25.8 190 2-207 103-330 (410)
3 3ow8_A WD repeat-containing pr 100.0 1.7E-37 5.7E-42 229.6 25.2 191 2-208 75-283 (321)
4 3ow8_A WD repeat-containing pr 100.0 3.2E-37 1.1E-41 228.0 26.4 186 2-203 117-320 (321)
5 3frx_A Guanine nucleotide-bind 100.0 4.8E-37 1.7E-41 226.9 26.8 193 2-207 12-230 (319)
6 1vyh_C Platelet-activating fac 100.0 2.6E-37 8.8E-42 235.6 25.3 190 2-207 145-372 (410)
7 4gqb_B Methylosome protein 50; 100.0 5.7E-37 2E-41 228.6 25.6 188 3-207 123-334 (344)
8 4ery_A WD repeat-containing pr 100.0 1.4E-36 5E-41 223.4 26.9 191 2-207 18-226 (312)
9 4gqb_B Methylosome protein 50; 100.0 9.6E-37 3.3E-41 227.4 25.9 188 6-207 81-292 (344)
10 2pm7_B Protein transport prote 100.0 9.2E-37 3.2E-41 223.3 25.2 190 2-205 4-239 (297)
11 3fm0_A Protein CIAO1; WDR39,SG 100.0 8.9E-37 3.1E-41 227.7 25.2 189 2-203 10-224 (345)
12 2xzm_R RACK1; ribosome, transl 100.0 2.2E-36 7.4E-41 225.4 27.1 190 2-205 16-245 (343)
13 1got_B GT-beta; complex (GTP-b 100.0 1E-36 3.4E-41 227.0 25.2 183 2-201 138-340 (340)
14 1got_B GT-beta; complex (GTP-b 100.0 2.6E-36 9E-41 224.8 26.1 189 2-207 50-260 (340)
15 2pbi_B Guanine nucleotide-bind 100.0 3.4E-36 1.2E-40 225.3 26.4 183 3-201 150-354 (354)
16 3fm0_A Protein CIAO1; WDR39,SG 100.0 9.8E-36 3.4E-40 222.1 25.7 196 2-210 100-341 (345)
17 4g56_B MGC81050 protein; prote 100.0 1.2E-35 4.2E-40 222.5 23.8 188 4-208 136-347 (357)
18 3bg1_A Protein SEC13 homolog; 100.0 4.3E-36 1.5E-40 221.5 20.8 189 2-204 8-247 (316)
19 4h5i_A Guanine nucleotide-exch 100.0 2.5E-35 8.6E-40 221.4 25.0 186 6-207 132-346 (365)
20 2hes_X YDR267CP; beta-propelle 100.0 4E-35 1.4E-39 217.6 25.6 189 5-205 56-281 (330)
21 2pbi_B Guanine nucleotide-bind 100.0 4.3E-35 1.5E-39 219.3 25.6 190 2-207 59-274 (354)
22 4g56_B MGC81050 protein; prote 100.0 3.5E-35 1.2E-39 220.1 24.4 190 4-207 91-304 (357)
23 2hes_X YDR267CP; beta-propelle 100.0 9.3E-35 3.2E-39 215.6 26.2 188 2-205 9-231 (330)
24 4aow_A Guanine nucleotide-bind 100.0 1E-34 3.6E-39 215.3 26.3 191 2-206 33-288 (340)
25 3f3f_A Nucleoporin SEH1; struc 100.0 1.2E-34 3.9E-39 215.0 26.1 194 2-208 6-341 (351)
26 3dm0_A Maltose-binding peripla 100.0 7E-35 2.4E-39 235.4 26.3 194 2-208 377-596 (694)
27 3frx_A Guanine nucleotide-bind 100.0 2.2E-34 7.6E-39 212.6 25.8 186 2-205 60-268 (319)
28 2xzm_R RACK1; ribosome, transl 100.0 1.9E-34 6.4E-39 215.0 25.5 188 2-206 71-287 (343)
29 4ery_A WD repeat-containing pr 100.0 3.7E-34 1.3E-38 210.6 26.7 193 2-207 60-271 (312)
30 3iz6_a 40S ribosomal protein R 100.0 2E-35 6.9E-40 223.1 19.0 190 2-207 61-283 (380)
31 3iz6_a 40S ribosomal protein R 100.0 6.1E-35 2.1E-39 220.5 21.6 191 2-208 152-379 (380)
32 2ymu_A WD-40 repeat protein; u 100.0 2.2E-34 7.7E-39 227.6 25.5 184 2-204 11-252 (577)
33 3jrp_A Fusion protein of prote 100.0 4.7E-34 1.6E-38 214.5 25.7 192 1-206 5-242 (379)
34 1erj_A Transcriptional repress 100.0 5.7E-34 2E-38 216.0 26.1 191 5-205 62-288 (393)
35 1nr0_A Actin interacting prote 100.0 1.4E-34 4.9E-39 230.5 23.8 197 2-207 54-273 (611)
36 3zwl_B Eukaryotic translation 100.0 1E-33 3.4E-38 211.8 26.3 190 2-208 27-253 (369)
37 1erj_A Transcriptional repress 100.0 5.6E-34 1.9E-38 216.1 24.7 187 2-205 160-390 (393)
38 2ymu_A WD-40 repeat protein; u 100.0 5.3E-34 1.8E-38 225.4 24.8 181 2-201 380-577 (577)
39 4e54_B DNA damage-binding prot 100.0 3.5E-34 1.2E-38 219.9 22.0 195 3-208 115-331 (435)
40 1nr0_A Actin interacting prote 100.0 3.6E-33 1.2E-37 222.5 26.5 188 2-205 142-398 (611)
41 3dwl_C Actin-related protein 2 100.0 1.2E-34 4.1E-39 218.2 17.1 188 3-207 7-239 (377)
42 3vl1_A 26S proteasome regulato 100.0 9.4E-34 3.2E-38 216.0 21.5 189 2-205 134-366 (420)
43 1k8k_C P40, ARP2/3 complex 41 100.0 1E-32 3.5E-37 206.9 25.7 190 2-207 3-236 (372)
44 2ynn_A Coatomer subunit beta'; 100.0 1E-32 3.6E-37 202.4 24.9 189 2-205 92-303 (304)
45 2pm7_B Protein transport prote 100.0 1.2E-32 4E-37 201.5 24.8 189 2-204 48-285 (297)
46 3dm0_A Maltose-binding peripla 100.0 1.1E-32 3.7E-37 222.6 25.7 189 2-207 425-635 (694)
47 2aq5_A Coronin-1A; WD40 repeat 100.0 1.6E-32 5.3E-37 208.6 23.5 194 2-207 76-302 (402)
48 3ei3_B DNA damage-binding prot 100.0 2.6E-32 9E-37 205.9 24.6 188 2-207 68-285 (383)
49 3dwl_C Actin-related protein 2 100.0 3.5E-33 1.2E-37 210.2 19.3 190 2-204 50-281 (377)
50 2j04_B YDR362CP, TAU91; beta p 100.0 6.2E-33 2.1E-37 216.6 20.7 189 3-205 203-429 (524)
51 3jro_A Fusion protein of prote 100.0 1.9E-32 6.4E-37 222.9 24.1 192 1-206 3-240 (753)
52 3vl1_A 26S proteasome regulato 100.0 5.3E-32 1.8E-36 206.4 25.1 187 8-209 98-327 (420)
53 1gxr_A ESG1, transducin-like e 100.0 1.9E-31 6.4E-36 197.4 27.4 189 5-208 95-300 (337)
54 3mkq_A Coatomer beta'-subunit; 100.0 6E-32 2E-36 221.3 26.2 200 2-207 8-262 (814)
55 2pm9_A Protein WEB1, protein t 100.0 3.3E-32 1.1E-36 207.1 22.9 193 2-207 108-340 (416)
56 3bg1_A Protein SEC13 homolog; 100.0 2E-32 6.7E-37 202.0 20.8 189 2-204 52-293 (316)
57 1gxr_A ESG1, transducin-like e 100.0 2.5E-31 8.4E-36 196.7 26.8 189 4-207 48-258 (337)
58 3k26_A Polycomb protein EED; W 100.0 7.3E-32 2.5E-36 201.7 22.0 184 6-203 68-365 (366)
59 3mmy_A MRNA export factor; mRN 100.0 1.3E-31 4.6E-36 200.2 23.0 187 2-203 34-345 (368)
60 3odt_A Protein DOA1; ubiquitin 100.0 5.1E-31 1.7E-35 193.3 25.2 189 2-208 54-259 (313)
61 3dw8_B Serine/threonine-protei 100.0 2.3E-31 7.9E-36 204.2 24.4 198 6-208 27-319 (447)
62 4gga_A P55CDC, cell division c 100.0 6.2E-31 2.1E-35 201.0 26.4 186 3-206 143-397 (420)
63 1sq9_A Antiviral protein SKI8; 100.0 2.3E-31 7.7E-36 201.4 23.5 195 7-205 121-396 (397)
64 3jrp_A Fusion protein of prote 100.0 2.8E-31 9.6E-36 199.3 23.7 190 2-205 50-288 (379)
65 1k8k_C P40, ARP2/3 complex 41 100.0 2.9E-31 1E-35 199.0 23.7 187 2-204 47-274 (372)
66 4aow_A Guanine nucleotide-bind 100.0 1.3E-30 4.3E-35 193.3 25.7 200 2-206 81-339 (340)
67 3v7d_B Cell division control p 100.0 1E-30 3.5E-35 201.8 25.9 187 2-208 116-385 (464)
68 4e54_B DNA damage-binding prot 100.0 1.3E-31 4.5E-36 205.5 19.9 198 2-207 159-433 (435)
69 4aez_A CDC20, WD repeat-contai 100.0 9.3E-31 3.2E-35 198.8 24.2 190 2-208 171-384 (401)
70 3gre_A Serine/threonine-protei 100.0 1.5E-31 5.3E-36 205.0 19.9 190 4-207 60-295 (437)
71 3k26_A Polycomb protein EED; W 100.0 2.7E-31 9.2E-36 198.6 20.6 197 4-207 15-263 (366)
72 3i2n_A WD repeat-containing pr 100.0 1E-30 3.5E-35 194.9 22.8 200 2-207 106-356 (357)
73 2oaj_A Protein SNI1; WD40 repe 100.0 8.3E-31 2.8E-35 216.4 24.4 196 3-208 13-246 (902)
74 1r5m_A SIR4-interacting protei 100.0 7.2E-31 2.5E-35 199.8 22.2 185 5-207 106-322 (425)
75 4ggc_A P55CDC, cell division c 100.0 6.7E-30 2.3E-34 187.8 26.6 185 3-205 63-316 (318)
76 3zwl_B Eukaryotic translation 100.0 3E-30 1E-34 193.0 24.7 189 2-206 69-348 (369)
77 1yfq_A Cell cycle arrest prote 100.0 2.5E-30 8.6E-35 192.0 23.9 200 3-208 7-286 (342)
78 3gre_A Serine/threonine-protei 100.0 1.6E-31 5.6E-36 204.9 17.8 201 5-208 109-363 (437)
79 3odt_A Protein DOA1; ubiquitin 100.0 2.9E-30 1E-34 189.2 23.6 187 2-208 13-218 (313)
80 1r5m_A SIR4-interacting protei 100.0 2E-30 6.8E-35 197.3 23.5 190 2-203 144-424 (425)
81 3ei3_B DNA damage-binding prot 100.0 1.5E-30 5.3E-35 196.3 22.4 195 4-207 115-342 (383)
82 2xyi_A Probable histone-bindin 100.0 2.7E-30 9.1E-35 198.0 23.6 191 2-205 176-411 (430)
83 2xyi_A Probable histone-bindin 100.0 1.6E-30 5.4E-35 199.3 22.2 189 3-204 124-353 (430)
84 4a11_B DNA excision repair pro 100.0 8.4E-30 2.9E-34 193.0 25.7 203 2-208 38-280 (408)
85 3sfz_A APAF-1, apoptotic pepti 100.0 3.2E-30 1.1E-34 219.4 25.9 200 2-207 610-874 (1249)
86 1sq9_A Antiviral protein SKI8; 100.0 8.8E-31 3E-35 198.2 20.1 199 2-207 57-325 (397)
87 3i2n_A WD repeat-containing pr 100.0 7.6E-31 2.6E-35 195.6 19.3 186 5-206 63-293 (357)
88 1pgu_A Actin interacting prote 100.0 3.4E-30 1.2E-34 204.7 24.0 188 4-208 15-242 (615)
89 2pm9_A Protein WEB1, protein t 100.0 1.2E-30 4.1E-35 198.5 20.4 191 5-208 65-298 (416)
90 3dw8_B Serine/threonine-protei 100.0 1.2E-30 4.1E-35 200.2 20.5 196 8-208 94-377 (447)
91 4a11_B DNA excision repair pro 100.0 1.7E-29 5.8E-34 191.4 25.6 198 4-208 96-369 (408)
92 2w18_A PALB2, fancn, partner a 100.0 2.6E-30 9E-35 188.6 20.0 185 7-202 111-355 (356)
93 2j04_B YDR362CP, TAU91; beta p 100.0 4.6E-31 1.6E-35 206.1 16.4 198 2-205 261-518 (524)
94 1pgu_A Actin interacting prote 100.0 1.3E-29 4.5E-34 201.4 24.5 191 2-207 58-286 (615)
95 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.2E-29 4.1E-34 195.4 23.2 187 7-207 4-274 (450)
96 4aez_A CDC20, WD repeat-contai 100.0 1.5E-29 5.1E-34 192.2 23.1 182 6-206 133-338 (401)
97 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.8E-29 6.2E-34 194.4 23.2 194 4-202 99-337 (450)
98 3jro_A Fusion protein of prote 100.0 5.7E-30 1.9E-34 208.4 20.7 190 2-205 48-286 (753)
99 3sfz_A APAF-1, apoptotic pepti 100.0 3.7E-29 1.3E-33 212.9 26.3 187 2-204 652-913 (1249)
100 4gq1_A NUP37; propeller, trans 100.0 1.2E-29 4E-34 192.4 19.2 185 2-203 131-388 (393)
101 2aq5_A Coronin-1A; WD40 repeat 100.0 4.8E-29 1.6E-33 189.4 21.5 187 10-207 37-257 (402)
102 3v7d_B Cell division control p 100.0 4.5E-28 1.5E-32 187.1 24.7 186 2-208 157-425 (464)
103 2ovr_B FBW7, F-BOX/WD repeat p 100.0 7E-28 2.4E-32 185.3 24.9 183 2-208 113-312 (445)
104 1p22_A F-BOX/WD-repeat protein 100.0 6.7E-28 2.3E-32 184.9 24.2 179 5-208 131-329 (435)
105 3vu4_A KMHSV2; beta-propeller 100.0 1.3E-27 4.4E-32 178.9 24.7 185 2-206 14-273 (355)
106 4h5i_A Guanine nucleotide-exch 100.0 2.3E-28 7.8E-33 183.6 20.3 194 2-208 68-304 (365)
107 2oaj_A Protein SNI1; WD40 repe 100.0 7.3E-29 2.5E-33 204.9 18.8 195 2-207 430-735 (902)
108 2j04_A TAU60, YPL007P, hypothe 100.0 4.1E-28 1.4E-32 187.4 21.7 174 5-203 83-296 (588)
109 1p22_A F-BOX/WD-repeat protein 100.0 9.9E-28 3.4E-32 184.0 21.8 180 2-206 168-367 (435)
110 3mkq_A Coatomer beta'-subunit; 100.0 1.8E-27 6.1E-32 194.9 24.5 190 2-206 92-304 (814)
111 2ovr_B FBW7, F-BOX/WD repeat p 100.0 4.4E-27 1.5E-31 180.8 25.1 181 2-207 154-351 (445)
112 4gq1_A NUP37; propeller, trans 100.0 5.2E-29 1.8E-33 188.8 13.7 193 13-208 95-352 (393)
113 4gga_A P55CDC, cell division c 100.0 7.6E-27 2.6E-31 178.3 24.2 179 10-208 108-314 (420)
114 3lrv_A PRE-mRNA-splicing facto 100.0 2.5E-28 8.5E-33 181.9 15.2 171 16-208 45-248 (343)
115 2j04_A TAU60, YPL007P, hypothe 100.0 1.9E-28 6.4E-33 189.3 14.4 171 5-206 13-213 (588)
116 4ggc_A P55CDC, cell division c 100.0 2.5E-26 8.5E-31 168.7 23.1 179 10-208 28-234 (318)
117 3lrv_A PRE-mRNA-splicing facto 100.0 1.1E-26 3.6E-31 173.1 20.6 180 5-205 123-334 (343)
118 1yfq_A Cell cycle arrest prote 100.0 2.3E-26 8E-31 170.6 21.5 180 2-202 94-322 (342)
119 1l0q_A Surface layer protein; 99.9 1.1E-24 3.8E-29 164.5 26.2 186 3-207 28-236 (391)
120 1l0q_A Surface layer protein; 99.9 1.3E-24 4.5E-29 164.1 26.4 182 8-207 74-278 (391)
121 3f3f_A Nucleoporin SEH1; struc 99.9 8.7E-26 3E-30 167.2 19.1 155 2-159 52-343 (351)
122 3bws_A Protein LP49; two-domai 99.9 1.2E-24 4.2E-29 166.3 25.2 187 3-207 165-393 (433)
123 3mmy_A MRNA export factor; mRN 99.9 4.6E-25 1.6E-29 164.7 18.2 119 43-161 27-168 (368)
124 3vu4_A KMHSV2; beta-propeller 99.9 2.6E-24 9E-29 161.0 21.9 194 8-207 59-339 (355)
125 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.1E-23 3.9E-28 160.6 24.5 184 2-205 173-388 (415)
126 3bws_A Protein LP49; two-domai 99.9 1.4E-24 4.9E-29 166.0 19.4 183 8-207 123-337 (433)
127 2oit_A Nucleoporin 214KDA; NH2 99.9 1.1E-23 3.8E-28 161.4 16.9 168 6-205 91-279 (434)
128 2w18_A PALB2, fancn, partner a 99.9 1.9E-23 6.7E-28 152.6 17.2 140 4-151 175-355 (356)
129 2ojh_A Uncharacterized protein 99.9 6.5E-22 2.2E-26 143.3 18.4 186 3-207 37-261 (297)
130 2hqs_A Protein TOLB; TOLB, PAL 99.9 5.3E-22 1.8E-26 151.4 18.1 189 3-207 113-347 (415)
131 2oit_A Nucleoporin 214KDA; NH2 99.9 2.4E-21 8.3E-26 148.4 16.4 158 7-203 36-222 (434)
132 3u4y_A Uncharacterized protein 99.9 5.3E-20 1.8E-24 135.9 21.8 185 5-207 38-255 (331)
133 1ri6_A Putative isomerase YBHE 99.9 1E-19 3.6E-24 134.6 21.0 181 9-203 85-307 (343)
134 3vgz_A Uncharacterized protein 99.9 2E-19 6.9E-24 133.7 22.6 183 8-207 89-306 (353)
135 3hfq_A Uncharacterized protein 99.9 8.1E-19 2.8E-23 130.6 25.5 188 4-203 82-316 (347)
136 1pby_B Quinohemoprotein amine 99.9 2.9E-19 1E-23 131.9 22.1 178 9-207 35-313 (337)
137 1ri6_A Putative isomerase YBHE 99.9 3.5E-19 1.2E-23 131.8 21.4 191 5-203 35-261 (343)
138 2ecf_A Dipeptidyl peptidase IV 99.9 3.2E-20 1.1E-24 150.9 17.0 184 7-207 36-324 (741)
139 1xfd_A DIP, dipeptidyl aminope 99.8 1.3E-20 4.5E-25 152.7 14.3 187 8-207 17-292 (723)
140 3vgz_A Uncharacterized protein 99.8 1.6E-18 5.4E-23 128.9 24.0 192 6-207 39-265 (353)
141 1nir_A Nitrite reductase; hemo 99.8 1.4E-18 4.9E-23 136.5 23.8 183 10-204 181-402 (543)
142 1nir_A Nitrite reductase; hemo 99.8 6.1E-19 2.1E-23 138.7 19.7 175 14-207 144-358 (543)
143 2ojh_A Uncharacterized protein 99.8 1.7E-18 5.9E-23 125.3 20.6 160 29-203 19-203 (297)
144 3hfq_A Uncharacterized protein 99.8 6.3E-18 2.1E-22 125.7 22.5 194 5-204 37-271 (347)
145 1jmx_B Amine dehydrogenase; ox 99.8 2.9E-18 9.9E-23 127.2 20.5 177 9-207 44-328 (349)
146 2z3z_A Dipeptidyl aminopeptida 99.8 7.6E-19 2.6E-23 142.1 18.0 187 5-205 118-392 (706)
147 3u4y_A Uncharacterized protein 99.8 8.8E-18 3E-22 124.0 21.6 181 14-207 4-210 (331)
148 2z3z_A Dipeptidyl aminopeptida 99.8 6.2E-19 2.1E-23 142.6 16.6 181 8-203 82-341 (706)
149 2ecf_A Dipeptidyl peptidase IV 99.8 1.4E-18 4.6E-23 141.3 16.2 183 3-204 147-413 (741)
150 1k32_A Tricorn protease; prote 99.8 1.2E-17 4.3E-22 140.4 21.9 181 4-206 375-639 (1045)
151 1xfd_A DIP, dipeptidyl aminope 99.8 1.7E-18 5.8E-23 140.4 15.8 182 9-201 62-341 (723)
152 1z68_A Fibroblast activation p 99.8 5.7E-19 1.9E-23 143.2 12.8 176 11-205 19-292 (719)
153 1k32_A Tricorn protease; prote 99.8 5.6E-18 1.9E-22 142.5 17.7 178 6-204 294-502 (1045)
154 3scy_A Hypothetical bacterial 99.8 4.3E-16 1.5E-20 116.5 26.0 183 6-203 98-336 (361)
155 1jmx_B Amine dehydrogenase; ox 99.8 6E-17 2E-21 120.1 19.6 142 12-162 4-184 (349)
156 3o4h_A Acylamino-acid-releasin 99.8 1.4E-17 4.7E-22 132.1 16.0 181 7-207 21-230 (582)
157 1pby_B Quinohemoprotein amine 99.8 3.5E-16 1.2E-20 115.3 21.4 178 20-207 2-272 (337)
158 3scy_A Hypothetical bacterial 99.8 8.5E-16 2.9E-20 114.9 22.8 189 6-203 48-290 (361)
159 1q7f_A NHL, brain tumor CG1071 99.7 1.9E-15 6.6E-20 109.4 23.2 185 6-206 75-282 (286)
160 1jof_A Carboxy-CIS,CIS-muconat 99.7 2.3E-16 7.8E-21 118.3 16.7 184 10-205 85-342 (365)
161 3o4h_A Acylamino-acid-releasin 99.7 3.5E-17 1.2E-21 129.8 12.5 181 5-202 61-274 (582)
162 4a5s_A Dipeptidyl peptidase 4 99.7 1.9E-16 6.4E-21 129.0 16.8 185 8-206 17-296 (740)
163 3fvz_A Peptidyl-glycine alpha- 99.7 2.8E-14 9.6E-19 105.5 24.8 186 7-207 23-280 (329)
164 1jof_A Carboxy-CIS,CIS-muconat 99.7 3.4E-15 1.1E-19 112.0 20.1 187 8-203 40-290 (365)
165 3pe7_A Oligogalacturonate lyas 99.7 1.7E-15 5.9E-20 114.1 17.9 180 13-206 41-275 (388)
166 3azo_A Aminopeptidase; POP fam 99.7 1.9E-15 6.6E-20 121.4 19.2 185 6-206 128-371 (662)
167 3e5z_A Putative gluconolactona 99.7 1.4E-14 4.8E-19 105.4 21.7 180 5-203 25-245 (296)
168 1q7f_A NHL, brain tumor CG1071 99.7 5.7E-14 2E-18 101.6 24.4 182 5-203 27-237 (286)
169 1z68_A Fibroblast activation p 99.7 5.2E-16 1.8E-20 125.9 14.7 178 9-206 61-348 (719)
170 3fvz_A Peptidyl-glycine alpha- 99.7 1.8E-14 6.2E-19 106.5 20.9 187 6-205 89-323 (329)
171 2oiz_A Aromatic amine dehydrog 99.7 1.1E-14 3.6E-19 109.1 19.8 178 12-205 54-335 (361)
172 2dg1_A DRP35, lactonase; beta 99.7 2.6E-13 8.8E-18 100.2 25.3 192 3-203 40-262 (333)
173 3azo_A Aminopeptidase; POP fam 99.6 4E-15 1.4E-19 119.6 14.9 183 12-202 81-321 (662)
174 3no2_A Uncharacterized protein 99.6 7.8E-14 2.7E-18 100.6 19.5 169 18-207 4-198 (276)
175 2gop_A Trilobed protease; beta 99.6 5.8E-14 2E-18 104.2 19.4 175 9-205 60-292 (347)
176 1rwi_B Serine/threonine-protei 99.6 1.3E-13 4.5E-18 98.8 20.6 182 8-207 67-267 (270)
177 2bkl_A Prolyl endopeptidase; m 99.6 2.4E-14 8.1E-19 115.9 18.1 187 5-203 118-348 (695)
178 1rwi_B Serine/threonine-protei 99.6 5.3E-13 1.8E-17 95.6 21.4 181 9-206 25-224 (270)
179 4a5s_A Dipeptidyl peptidase 4 99.6 2.7E-14 9.4E-19 116.3 16.2 178 11-206 65-355 (740)
180 3pe7_A Oligogalacturonate lyas 99.6 1.4E-14 4.9E-19 109.0 12.8 188 5-206 78-331 (388)
181 3c5m_A Oligogalacturonate lyas 99.6 5.2E-15 1.8E-19 111.5 9.8 184 10-206 38-275 (396)
182 2xdw_A Prolyl endopeptidase; a 99.6 5.3E-13 1.8E-17 108.3 22.0 189 6-206 123-370 (710)
183 1xip_A Nucleoporin NUP159; bet 99.6 2.9E-13 9.8E-18 101.5 18.4 165 9-187 39-226 (388)
184 3no2_A Uncharacterized protein 99.6 7.5E-13 2.6E-17 95.5 18.3 178 2-193 30-231 (276)
185 2dg1_A DRP35, lactonase; beta 99.6 2.9E-13 9.8E-18 100.0 15.8 178 7-204 5-213 (333)
186 3c5m_A Oligogalacturonate lyas 99.5 4.8E-14 1.6E-18 106.3 11.7 175 12-206 85-331 (396)
187 2z2n_A Virginiamycin B lyase; 99.5 2.6E-11 9E-16 87.8 25.2 183 3-205 10-213 (299)
188 3e5z_A Putative gluconolactona 99.5 6.7E-12 2.3E-16 91.2 21.4 179 4-205 65-287 (296)
189 2gop_A Trilobed protease; beta 99.5 3.6E-12 1.2E-16 94.5 18.9 169 10-203 106-330 (347)
190 3dsm_A Uncharacterized protein 99.5 9E-12 3.1E-16 92.1 20.3 180 7-206 83-303 (328)
191 2z2n_A Virginiamycin B lyase; 99.5 1.1E-10 3.8E-15 84.4 25.4 182 6-205 97-296 (299)
192 3dsm_A Uncharacterized protein 99.5 4.3E-11 1.5E-15 88.4 23.0 180 8-207 44-256 (328)
193 2xdw_A Prolyl endopeptidase; a 99.5 6.5E-12 2.2E-16 101.9 19.6 183 10-206 173-416 (710)
194 1qks_A Cytochrome CD1 nitrite 99.4 6.3E-11 2.2E-15 93.5 22.5 185 8-204 197-421 (567)
195 1yr2_A Prolyl oligopeptidase; 99.4 1.9E-11 6.4E-16 99.7 19.9 183 6-203 161-392 (741)
196 2mad_H Methylamine dehydrogena 99.4 2.3E-10 8E-15 85.9 23.6 182 12-208 70-354 (373)
197 2qc5_A Streptogramin B lactona 99.4 1.4E-09 4.9E-14 78.6 26.0 177 7-203 61-259 (300)
198 2qc5_A Streptogramin B lactona 99.4 1.8E-09 6.2E-14 78.1 26.0 180 6-203 18-217 (300)
199 1qks_A Cytochrome CD1 nitrite 99.4 1.7E-10 5.8E-15 91.1 21.5 172 17-207 165-376 (567)
200 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 7.6E-10 2.6E-14 80.8 23.7 182 7-206 17-258 (314)
201 3g4e_A Regucalcin; six bladed 99.4 1.6E-09 5.5E-14 78.8 24.3 181 7-207 12-232 (297)
202 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 5E-10 1.7E-14 81.7 21.6 180 6-205 69-300 (314)
203 3hrp_A Uncharacterized protein 99.4 6.2E-10 2.1E-14 84.6 22.5 189 8-206 131-356 (409)
204 3sjl_D Methylamine dehydrogena 99.4 1.3E-10 4.3E-15 87.0 17.7 137 12-152 82-255 (386)
205 3c75_H MADH, methylamine dehyd 99.3 1.1E-10 3.8E-15 88.7 16.9 183 12-208 122-406 (426)
206 3g4e_A Regucalcin; six bladed 99.3 7.1E-10 2.4E-14 80.7 19.6 159 7-185 53-252 (297)
207 2bkl_A Prolyl endopeptidase; m 99.3 6.3E-11 2.1E-15 96.0 15.1 181 11-206 171-399 (695)
208 2qe8_A Uncharacterized protein 99.3 2.9E-09 1E-13 79.0 22.4 178 5-197 64-314 (343)
209 3hrp_A Uncharacterized protein 99.3 3.6E-09 1.2E-13 80.4 22.3 183 13-202 176-408 (409)
210 3dr2_A Exported gluconolactona 99.3 4.4E-09 1.5E-13 76.7 21.6 179 6-203 43-266 (305)
211 1xip_A Nucleoporin NUP159; bet 99.3 2E-10 6.8E-15 86.2 14.5 117 5-139 86-230 (388)
212 2ghs_A AGR_C_1268P; regucalcin 99.2 1.7E-08 5.7E-13 74.4 23.7 175 10-203 51-259 (326)
213 2oiz_A Aromatic amine dehydrog 99.2 5.5E-10 1.9E-14 83.6 15.8 151 18-204 14-182 (361)
214 3dr2_A Exported gluconolactona 99.2 2.9E-09 9.9E-14 77.7 19.2 167 5-195 83-298 (305)
215 2hz6_A Endoplasmic reticulum t 99.2 1.2E-12 4.1E-17 98.3 1.1 169 18-207 8-195 (369)
216 3iuj_A Prolyl endopeptidase; h 99.2 1.9E-09 6.4E-14 87.4 18.7 183 5-205 126-360 (693)
217 1mda_H Methylamine dehydrogena 99.2 8.5E-10 2.9E-14 82.4 14.8 179 12-208 69-350 (368)
218 1yr2_A Prolyl oligopeptidase; 99.1 3.7E-09 1.3E-13 86.3 17.0 181 11-206 212-443 (741)
219 2iwa_A Glutamine cyclotransfer 99.1 1.6E-07 5.4E-12 66.8 21.6 187 10-205 23-238 (266)
220 1npe_A Nidogen, entactin; glyc 99.1 4.1E-07 1.4E-11 64.9 23.9 183 8-207 36-241 (267)
221 3sjl_D Methylamine dehydrogena 99.1 3.4E-08 1.2E-12 74.0 18.1 155 13-204 38-208 (386)
222 2ghs_A AGR_C_1268P; regucalcin 99.0 1.7E-07 5.8E-12 69.0 20.6 162 7-191 89-289 (326)
223 3hxj_A Pyrrolo-quinoline quino 99.0 3.3E-08 1.1E-12 72.6 15.4 173 9-206 138-326 (330)
224 2qe8_A Uncharacterized protein 98.9 7.1E-08 2.4E-12 71.6 16.0 189 8-205 17-279 (343)
225 1fwx_A Nitrous oxide reductase 98.9 1.7E-07 5.7E-12 73.5 18.2 171 17-204 99-361 (595)
226 2mad_H Methylamine dehydrogena 98.9 2.9E-07 9.9E-12 69.1 18.8 150 15-206 28-197 (373)
227 3qqz_A Putative uncharacterize 98.9 3.3E-06 1.1E-10 59.7 22.9 192 3-202 22-251 (255)
228 3nol_A Glutamine cyclotransfer 98.9 6.4E-07 2.2E-11 63.2 19.0 174 10-193 45-244 (262)
229 2ece_A 462AA long hypothetical 98.9 3.3E-07 1.1E-11 69.6 18.4 179 10-192 140-399 (462)
230 3iuj_A Prolyl endopeptidase; h 98.8 1.9E-07 6.6E-12 75.7 16.4 179 11-206 178-407 (693)
231 3nok_A Glutaminyl cyclase; bet 98.8 3.4E-06 1.2E-10 59.6 20.2 170 10-192 57-253 (268)
232 3c75_H MADH, methylamine dehyd 98.8 1.1E-06 3.9E-11 66.8 17.9 121 17-163 82-219 (426)
233 2ece_A 462AA long hypothetical 98.8 1.7E-06 5.8E-11 65.8 18.3 185 17-204 93-352 (462)
234 3hxj_A Pyrrolo-quinoline quino 98.8 1E-06 3.4E-11 64.5 16.6 160 20-202 108-282 (330)
235 1yiq_A Quinohemoprotein alcoho 98.8 1.6E-06 5.6E-11 70.2 18.7 178 12-208 239-509 (689)
236 3mbr_X Glutamine cyclotransfer 98.7 9.1E-06 3.1E-10 56.8 19.7 175 9-193 22-223 (243)
237 2hz6_A Endoplasmic reticulum t 98.7 1.9E-09 6.5E-14 80.9 1.2 142 10-162 40-201 (369)
238 1kb0_A Quinohemoprotein alcoho 98.7 1.7E-06 5.8E-11 70.0 17.3 139 59-208 246-511 (677)
239 3v64_C Agrin; beta propeller, 98.7 4.3E-05 1.5E-09 56.8 24.5 183 8-205 73-276 (349)
240 1fwx_A Nitrous oxide reductase 98.6 1.8E-05 6E-10 62.3 20.7 152 8-164 134-382 (595)
241 1npe_A Nidogen, entactin; glyc 98.6 4E-05 1.4E-09 54.5 22.3 148 8-162 79-247 (267)
242 3v65_B Low-density lipoprotein 98.6 7.1E-05 2.4E-09 56.4 22.6 183 8-205 116-319 (386)
243 2fp8_A Strictosidine synthase; 98.6 2.7E-05 9.3E-10 57.0 19.8 182 8-206 80-315 (322)
244 1mda_H Methylamine dehydrogena 98.6 2E-06 6.7E-11 64.3 13.3 157 33-204 47-240 (368)
245 1ijq_A LDL receptor, low-densi 98.6 7.7E-05 2.6E-09 54.6 25.2 189 8-206 30-240 (316)
246 2fp8_A Strictosidine synthase; 98.6 3.7E-05 1.3E-09 56.3 20.0 138 8-153 19-216 (322)
247 2xe4_A Oligopeptidase B; hydro 98.5 1.5E-05 5.2E-10 65.2 18.6 103 9-116 175-289 (751)
248 3sov_A LRP-6, low-density lipo 98.5 0.00011 3.8E-09 53.9 23.4 184 9-206 36-240 (318)
249 3q7m_A Lipoprotein YFGL, BAMB; 98.5 2.5E-05 8.4E-10 58.5 17.6 130 67-208 188-341 (376)
250 1kb0_A Quinohemoprotein alcoho 98.5 1.1E-05 3.7E-10 65.3 16.5 148 11-164 246-518 (677)
251 3q7m_A Lipoprotein YFGL, BAMB; 98.5 3.6E-05 1.2E-09 57.6 17.9 133 19-162 53-216 (376)
252 2iwa_A Glutamine cyclotransfer 98.4 3.3E-05 1.1E-09 54.9 16.2 153 46-207 10-184 (266)
253 3p5b_L Low density lipoprotein 98.4 0.00023 7.8E-09 53.9 25.3 189 7-205 111-321 (400)
254 1kv9_A Type II quinohemoprotei 98.4 8.7E-06 3E-10 65.8 14.1 178 11-208 233-492 (668)
255 3nol_A Glutamine cyclotransfer 98.4 3.5E-05 1.2E-09 54.4 14.5 151 47-207 33-204 (262)
256 4a2l_A BT_4663, two-component 98.3 0.00085 2.9E-08 55.3 25.2 182 7-205 356-572 (795)
257 3nok_A Glutaminyl cyclase; bet 98.3 2.7E-05 9.3E-10 55.0 13.2 151 46-207 44-213 (268)
258 1n7d_A LDL receptor, low-densi 98.3 1.4E-05 4.8E-10 64.9 13.4 188 8-205 406-615 (699)
259 4a2l_A BT_4663, two-component 98.3 0.0009 3.1E-08 55.2 24.6 187 7-206 214-438 (795)
260 3v64_C Agrin; beta propeller, 98.2 0.00067 2.3E-08 50.4 22.1 177 10-205 36-235 (349)
261 3mbr_X Glutamine cyclotransfer 98.2 0.00025 8.5E-09 49.6 15.9 153 46-207 10-182 (243)
262 3v9f_A Two-component system se 98.2 0.0013 4.6E-08 54.0 22.8 180 8-205 363-569 (781)
263 3tc9_A Hypothetical hydrolase; 98.2 0.0003 1E-08 53.8 17.3 138 57-204 138-301 (430)
264 3m0c_C LDL receptor, low-densi 98.2 0.0019 6.5E-08 53.2 24.9 189 7-205 423-633 (791)
265 3tc9_A Hypothetical hydrolase; 98.1 0.00015 5E-09 55.5 14.8 136 8-152 137-300 (430)
266 3v9f_A Two-component system se 98.1 0.0011 3.7E-08 54.6 20.7 180 7-205 406-612 (781)
267 3s94_A LRP-6, low-density lipo 98.1 0.0018 6.1E-08 51.9 21.3 185 8-206 40-245 (619)
268 2xe4_A Oligopeptidase B; hydro 98.1 5.6E-05 1.9E-09 61.9 12.8 136 57-204 175-354 (751)
269 3v65_B Low-density lipoprotein 98.1 0.0014 4.9E-08 49.3 22.2 161 30-204 94-277 (386)
270 1k3i_A Galactose oxidase precu 98.1 0.00017 5.7E-09 58.2 15.1 77 10-90 245-327 (656)
271 2ad6_A Methanol dehydrogenase 98.1 0.00025 8.5E-09 56.3 15.7 56 142-208 442-498 (571)
272 2p9w_A MAL S 1 allergenic prot 98.1 0.0002 6.7E-09 52.4 13.9 145 4-153 9-215 (334)
273 1yiq_A Quinohemoprotein alcoho 98.1 0.00027 9.2E-09 57.4 16.1 180 19-208 70-342 (689)
274 1flg_A Protein (quinoprotein e 98.1 0.00065 2.2E-08 54.0 17.5 57 142-208 464-520 (582)
275 1w6s_A Methanol dehydrogenase 98.0 0.00037 1.3E-08 55.6 16.0 163 32-208 278-507 (599)
276 2p4o_A Hypothetical protein; p 98.0 0.0017 5.8E-08 47.1 20.1 175 8-203 32-241 (306)
277 4hw6_A Hypothetical protein, I 98.0 0.0024 8.3E-08 48.9 21.4 188 8-203 182-432 (433)
278 3pbp_A Nucleoporin NUP82; beta 98.0 0.0016 5.5E-08 49.2 17.4 109 9-122 67-206 (452)
279 3qqz_A Putative uncharacterize 97.9 0.0022 7.7E-08 45.3 17.4 138 9-150 71-250 (255)
280 1ijq_A LDL receptor, low-densi 97.9 0.0029 1E-07 46.2 23.3 161 30-204 8-195 (316)
281 4hw6_A Hypothetical protein, I 97.9 0.0022 7.5E-08 49.1 17.5 138 57-203 140-303 (433)
282 2xbg_A YCF48-like protein; pho 97.9 0.0034 1.2E-07 46.1 20.8 175 8-202 122-320 (327)
283 4a0p_A LRP6, LRP-6, low-densit 97.9 0.0061 2.1E-07 49.0 24.0 183 8-206 37-239 (628)
284 3amr_A 3-phytase; beta-propell 97.9 0.0039 1.3E-07 46.0 20.7 172 19-208 40-267 (355)
285 3pbp_A Nucleoporin NUP82; beta 97.8 0.0056 1.9E-07 46.3 17.5 166 15-199 28-207 (452)
286 2p4o_A Hypothetical protein; p 97.8 0.0046 1.6E-07 44.8 20.8 168 8-193 72-277 (306)
287 3p5b_L Low density lipoprotein 97.8 0.0061 2.1E-07 46.1 21.8 162 30-205 90-278 (400)
288 1k3i_A Galactose oxidase precu 97.7 0.0038 1.3E-07 50.4 17.2 104 12-116 190-305 (656)
289 2xbg_A YCF48-like protein; pho 97.7 0.0081 2.8E-07 44.1 22.0 174 7-201 35-231 (327)
290 3m0c_C LDL receptor, low-densi 97.6 0.02 6.8E-07 47.3 21.7 161 30-204 402-589 (791)
291 1kv9_A Type II quinohemoprotei 97.6 0.0069 2.3E-07 49.1 16.1 174 29-208 73-337 (668)
292 4a0p_A LRP6, LRP-6, low-densit 97.5 0.026 8.8E-07 45.4 25.2 184 8-206 340-551 (628)
293 2ism_A Putative oxidoreductase 97.4 0.02 6.8E-07 42.5 18.8 102 8-116 31-153 (352)
294 3s94_A LRP-6, low-density lipo 97.4 0.035 1.2E-06 44.6 22.8 141 8-153 349-510 (619)
295 1n7d_A LDL receptor, low-densi 97.4 0.0017 5.7E-08 52.9 10.5 145 10-162 455-623 (699)
296 2ad6_A Methanol dehydrogenase 97.4 0.0086 2.9E-07 47.6 14.3 32 133-164 474-505 (571)
297 1tl2_A L10, protein (tachylect 97.4 0.0064 2.2E-07 41.8 11.6 103 9-121 42-156 (236)
298 3sov_A LRP-6, low-density lipo 97.3 0.028 9.4E-07 41.1 19.7 145 9-161 80-246 (318)
299 1tl2_A L10, protein (tachylect 97.3 0.01 3.5E-07 40.8 11.6 86 56-147 41-157 (236)
300 3amr_A 3-phytase; beta-propell 97.2 0.034 1.2E-06 41.1 16.2 128 31-161 98-272 (355)
301 3kya_A Putative phosphatase; s 97.2 0.025 8.5E-07 44.0 14.8 158 9-203 140-340 (496)
302 2ism_A Putative oxidoreductase 97.2 0.039 1.3E-06 40.9 15.2 66 7-74 74-153 (352)
303 3kya_A Putative phosphatase; s 97.1 0.068 2.3E-06 41.6 22.4 195 8-207 186-478 (496)
304 3sre_A PON1, serum paraoxonase 97.1 0.053 1.8E-06 40.3 20.9 170 9-190 51-282 (355)
305 1flg_A Protein (quinoprotein e 97.1 0.011 3.8E-07 47.0 12.0 31 134-164 497-527 (582)
306 1w6s_A Methanol dehydrogenase 97.1 0.084 2.9E-06 42.2 17.4 80 128-208 246-346 (599)
307 2xzh_A Clathrin heavy chain 1; 96.9 0.074 2.5E-06 39.0 23.1 173 13-205 72-333 (365)
308 2p9w_A MAL S 1 allergenic prot 96.8 0.097 3.3E-06 38.4 16.3 145 55-204 12-215 (334)
309 3a9g_A Putative uncharacterize 96.7 0.12 4.1E-06 38.3 19.3 102 8-116 29-153 (354)
310 1bpo_A Protein (clathrin); cla 96.6 0.16 5.6E-06 38.8 22.7 173 13-205 71-332 (494)
311 2g8s_A Glucose/sorbosone dehyd 96.5 0.17 5.7E-06 37.5 14.1 104 8-116 18-148 (353)
312 2xn4_A Kelch-like protein 2; s 96.4 0.16 5.5E-06 36.4 16.0 172 18-205 61-277 (302)
313 2vpj_A Kelch-like protein 12; 96.3 0.17 6E-06 36.2 17.5 173 18-205 62-279 (301)
314 1cru_A Protein (soluble quinop 96.2 0.29 9.8E-06 37.7 16.5 105 8-116 27-162 (454)
315 4asc_A Kelch repeat and BTB do 96.0 0.27 9.2E-06 35.5 16.7 100 15-117 42-157 (315)
316 3ii7_A Kelch-like protein 7; p 96.0 0.27 9.1E-06 35.3 16.7 94 19-118 12-111 (306)
317 1cru_A Protein (soluble quinop 95.9 0.4 1.4E-05 36.9 17.6 54 55-108 26-87 (454)
318 3das_A Putative oxidoreductase 95.9 0.35 1.2E-05 35.8 20.9 106 7-116 31-158 (347)
319 2vpj_A Kelch-like protein 12; 95.9 0.3 1E-05 34.9 15.3 172 18-205 14-232 (301)
320 3ii7_A Kelch-like protein 7; p 95.9 0.31 1.1E-05 35.0 16.2 174 18-205 55-273 (306)
321 1xi4_A Clathrin heavy chain; a 95.9 0.61 2.1E-05 41.2 15.5 93 14-116 72-169 (1630)
322 2xn4_A Kelch-like protein 2; s 95.8 0.32 1.1E-05 34.8 16.2 97 18-119 15-119 (302)
323 3a9g_A Putative uncharacterize 95.7 0.43 1.5E-05 35.4 19.2 173 8-192 73-329 (354)
324 3ott_A Two-component system se 95.6 0.75 2.6E-05 37.8 21.2 174 8-205 63-261 (758)
325 3sre_A PON1, serum paraoxonase 95.5 0.22 7.5E-06 37.0 10.5 75 8-85 221-297 (355)
326 1zgk_A Kelch-like ECH-associat 95.4 0.47 1.6E-05 34.1 17.2 173 17-205 23-241 (308)
327 1zgk_A Kelch-like ECH-associat 95.4 0.49 1.7E-05 34.0 16.6 172 18-205 70-288 (308)
328 3sbq_A Nitrous-oxide reductase 95.3 0.32 1.1E-05 38.5 11.1 106 9-117 324-454 (638)
329 3das_A Putative oxidoreductase 95.3 0.58 2E-05 34.6 14.9 55 54-108 30-90 (347)
330 3ei3_A DNA damage-binding prot 95.0 1.7 5.6E-05 37.8 19.0 163 30-200 862-1058(1158)
331 2g8s_A Glucose/sorbosone dehyd 93.9 1.4 4.7E-05 32.6 18.1 71 125-202 273-350 (353)
332 2uvk_A YJHT; unknown function, 93.7 1.5 5.1E-05 32.1 13.1 56 18-76 65-128 (357)
333 2woz_A Kelch repeat and BTB do 93.4 1.6 5.4E-05 31.5 16.2 99 16-117 54-167 (318)
334 2wg3_C Hedgehog-interacting pr 93.3 2.2 7.6E-05 32.9 13.6 108 8-119 14-160 (463)
335 2be1_A Serine/threonine-protei 92.7 1.2 4E-05 32.9 9.2 96 68-163 11-140 (339)
336 3ei3_A DNA damage-binding prot 92.2 5.5 0.00019 34.7 18.6 128 67-204 844-999 (1158)
337 3s25_A Hypothetical 7-bladed b 92.0 2.6 8.8E-05 30.5 15.9 126 13-152 109-254 (302)
338 4gq2_M Nucleoporin NUP120; bet 91.3 2.1 7.1E-05 36.4 10.3 40 123-162 236-275 (950)
339 2xzh_A Clathrin heavy chain 1; 90.3 4.3 0.00015 30.0 10.9 65 131-208 75-139 (365)
340 2uvk_A YJHT; unknown function, 89.1 5.1 0.00018 29.2 15.8 98 18-119 19-129 (357)
341 1bpo_A Protein (clathrin); cla 89.1 6.4 0.00022 30.4 13.9 107 2-108 193-311 (494)
342 2wg3_C Hedgehog-interacting pr 88.7 7 0.00024 30.2 12.0 31 55-85 13-44 (463)
343 3s25_A Hypothetical 7-bladed b 87.6 6.3 0.00021 28.4 16.6 125 14-152 59-215 (302)
344 4fhn_B Nucleoporin NUP120; pro 87.6 1.3 4.6E-05 38.3 6.6 38 124-161 239-276 (1139)
345 4asc_A Kelch repeat and BTB do 86.9 6.8 0.00023 28.0 17.5 56 32-89 13-79 (315)
346 2zwa_A Leucine carboxyl methyl 86.7 12 0.0004 30.6 17.3 70 18-89 451-525 (695)
347 4gq2_M Nucleoporin NUP120; bet 80.3 3.6 0.00012 35.0 6.1 37 57-93 237-273 (950)
348 3zwu_A Alkaline phosphatase PH 78.5 12 0.0004 30.0 8.1 16 59-74 479-494 (592)
349 3sbq_A Nitrous-oxide reductase 77.5 20 0.00069 28.7 8.8 68 98-165 323-430 (638)
350 2zwa_A Leucine carboxyl methyl 77.3 28 0.00096 28.4 10.7 70 17-88 499-579 (695)
351 4a9v_A PHOX; hydrolase, beta-p 77.1 15 0.00053 29.3 8.2 63 8-73 476-548 (592)
352 3f7f_A Nucleoporin NUP120; nuc 76.7 5.3 0.00018 32.7 5.7 37 124-162 223-259 (729)
353 2woz_A Kelch repeat and BTB do 75.8 19 0.00065 25.7 17.1 90 20-118 17-119 (318)
354 3zwu_A Alkaline phosphatase PH 75.5 13 0.00046 29.7 7.7 59 9-73 477-548 (592)
355 4fhn_B Nucleoporin NUP120; pro 75.4 3.6 0.00012 35.7 4.8 38 57-94 239-276 (1139)
356 4a9v_A PHOX; hydrolase, beta-p 74.9 24 0.00082 28.2 8.8 16 58-73 478-493 (592)
357 3ott_A Two-component system se 73.5 36 0.0012 27.9 25.7 180 8-205 324-546 (758)
358 3qhy_B Beta-lactamase inhibito 72.9 22 0.00077 25.2 13.0 68 123-205 180-247 (282)
359 3no0_A DNA gyrase subunit A; D 72.8 23 0.00077 25.2 19.6 137 55-204 67-246 (276)
360 1xi4_A Clathrin heavy chain; a 70.5 34 0.0012 31.0 9.3 103 1-103 192-306 (1630)
361 1suu_A DNA gyrase subunit A; t 66.2 34 0.0012 24.7 19.9 173 16-204 5-231 (312)
362 3f7f_A Nucleoporin NUP120; nuc 64.2 11 0.00038 30.9 5.0 30 66-95 230-259 (729)
363 3uc1_A DNA gyrase subunit A; D 60.7 46 0.0016 24.3 19.9 110 8-122 95-222 (327)
364 2be1_A Serine/threonine-protei 60.1 33 0.0011 25.2 6.6 29 135-163 11-39 (339)
365 1suu_A DNA gyrase subunit A; t 59.8 46 0.0016 24.0 20.4 86 66-152 113-230 (312)
366 3qhy_B Beta-lactamase inhibito 59.4 44 0.0015 23.6 14.0 169 9-205 25-208 (282)
367 1wp5_A Topoisomerase IV; broke 57.9 52 0.0018 24.0 20.7 130 67-204 106-277 (323)
368 1zi0_A DNA gyrase subunit A; b 56.2 53 0.0018 23.6 19.6 96 56-152 95-225 (307)
369 1wp5_A Topoisomerase IV; broke 52.1 66 0.0022 23.4 17.8 181 17-204 3-225 (323)
370 1zvt_A Topoisomerase IV subuni 50.5 61 0.0021 22.6 13.1 62 132-204 93-163 (256)
371 3q6k_A 43.2 kDa salivary prote 45.9 93 0.0032 23.4 21.2 142 9-153 88-306 (381)
372 4gz8_A Semaphorin-3A; multi-do 42.0 47 0.0016 27.1 5.3 26 123-148 470-495 (667)
373 3no0_A DNA gyrase subunit A; D 41.0 93 0.0032 22.0 17.0 111 7-122 67-190 (276)
374 3l6v_A GYRA, DNA gyrase subuni 40.2 1.1E+02 0.0039 22.7 18.2 179 13-204 1-265 (370)
375 1sqj_A OXG-RCBH, oligoxylogluc 38.9 1.7E+02 0.0058 24.4 14.4 63 7-73 14-82 (789)
376 1zi0_A DNA gyrase subunit A; b 37.8 1.1E+02 0.0038 21.9 19.5 179 17-203 1-225 (307)
377 1q47_A Semaphorin 3A; beta pro 36.1 72 0.0025 24.9 5.4 25 123-147 462-486 (495)
378 4h3o_A Lectin; cadmium, plant 30.5 83 0.0028 18.3 10.3 16 102-117 54-69 (105)
379 3al9_A Plexin-A2; beta-propell 27.3 1.6E+02 0.0056 23.2 6.1 70 9-81 401-476 (539)
380 3mwp_A Nucleoprotein; structur 26.0 21 0.00072 27.2 0.9 20 190-209 162-181 (577)
381 1olz_A Semaphorin 4D; developm 25.9 1.2E+02 0.0041 24.8 5.2 38 111-148 417-477 (663)
382 3al9_A Plexin-A2; beta-propell 22.8 2.9E+02 0.0098 21.9 7.8 66 57-122 401-475 (539)
383 3uc1_A DNA gyrase subunit A; D 21.2 2.4E+02 0.0083 20.5 20.9 139 56-203 95-278 (327)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.7e-38 Score=233.25 Aligned_cols=200 Identities=19% Similarity=0.290 Sum_probs=168.3
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
+|++|.+.|++++|+|++++|+++ +.|+.|++||+ .+...+..+..|..+|.+++|+|++++|++|+.|+.|++
T Consensus 8 ~~~~h~~~V~~~~fsp~~~~l~s~---~~dg~v~lWd~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~v 81 (304)
T 2ynn_A 8 TFSNRSDRVKGIDFHPTEPWVLTT---LYSGRVELWNY---ETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRV 81 (304)
T ss_dssp EEEEECSCEEEEEECSSSSEEEEE---ETTSEEEEEET---TTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEE
T ss_pred eecCCCCceEEEEECCCCCEEEEE---cCCCcEEEEEC---CCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEE
Confidence 688999999999999999999999 68999999999 566778888899999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------eceEEEEEcc-CCceEEEecC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPVKCLAIDP-HEEFFVTGAG 142 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v~~~~~~~-~~~~l~~~~~ 142 (213)
||+++++.+..+.+|...|.+++|+|++++|++++.|+.++ ..|.+++|+| ++.+|++|+.
T Consensus 82 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~ 161 (304)
T 2ynn_A 82 FNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCL 161 (304)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEET
T ss_pred EECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeC
Confidence 99999999999999999999999999999999999999886 5688889988 5678888888
Q ss_pred CCcEEEEEccCCeeeeee-------------cC---------------------CC-CceeEEEecCCCeEEEEeCCCC-
Q psy7433 143 DGDIKVWSLSGNHLLYNF-------------PG---------------------EH-ARSSFFKHIGQGVTQLHVDGGS- 186 (213)
Q Consensus 143 dg~i~v~d~~~~~~~~~~-------------~~---------------------~~-~~~~~~~~~~~~v~~~~~~~~~- 186 (213)
|+.|++||+++......+ .. .. .....+..|...|.+++|+|++
T Consensus 162 D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~ 241 (304)
T 2ynn_A 162 DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLP 241 (304)
T ss_dssp TSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSS
T ss_pred CCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCC
Confidence 888888887543211110 00 00 0111234466889999999965
Q ss_pred eEEEEecCCcEEEEeCCCCcc
Q psy7433 187 RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 187 ~l~s~~~d~~i~iw~~~~~~~ 207 (213)
.|++++.||.|++||+.+.+.
T Consensus 242 ~l~s~s~Dg~i~iWd~~~~~~ 262 (304)
T 2ynn_A 242 IIISGSEDGTLKIWNSSTYKV 262 (304)
T ss_dssp EEEEEETTSCEEEEETTTCCE
T ss_pred EEEEEcCCCeEEEEECCCCce
Confidence 699999999999999988753
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=8.3e-38 Score=238.33 Aligned_cols=190 Identities=17% Similarity=0.270 Sum_probs=176.5
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
++.+|.++|++++|+|++.+|+++ +.|+.|++||+ .+++....+.+|...|.+++|+|++++|++|+.|+.|++
T Consensus 103 ~l~gh~~~V~~~~~~p~~~~l~s~---s~Dg~i~vwd~---~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~i 176 (410)
T 1vyh_C 103 ALSGHRSPVTRVIFHPVFSVMVSA---SEDATIKVWDY---ETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL 176 (410)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEE---ESSSCEEEEET---TTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCE
T ss_pred eecccCCcEEEEEEcCCCCEEEEE---eCCCeEEEEEC---CCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 578999999999999999999999 68999999999 567778889999999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDG 144 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg 144 (213)
||+.+++.+..+.+|...|.+++|+|+++++++++.|+.++ ..+.++.|+|+++++++|+.|+
T Consensus 177 wd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~ 256 (410)
T 1vyh_C 177 WDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 256 (410)
T ss_dssp EETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCC
Confidence 99999999999999999999999999999999999999886 5689999999999999999999
Q ss_pred cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC---------------------CeEEEEecCCcEEEEeCC
Q psy7433 145 DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG---------------------SRLFSCGADGSMKVRQLP 203 (213)
Q Consensus 145 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---------------------~~l~s~~~d~~i~iw~~~ 203 (213)
.|++||+++++....+..|. ..|.+++|+|+ .+|++++.|+.|++||+.
T Consensus 257 ~v~vwd~~~~~~~~~~~~h~----------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~ 326 (410)
T 1vyh_C 257 TVRVWVVATKECKAELREHR----------HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326 (410)
T ss_dssp CEEEEETTTCCEEEEECCCS----------SCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETT
T ss_pred eEEEEECCCCceeeEecCCC----------ceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECC
Confidence 99999999999988888876 78999999983 369999999999999999
Q ss_pred CCcc
Q psy7433 204 DRDA 207 (213)
Q Consensus 204 ~~~~ 207 (213)
++..
T Consensus 327 ~~~~ 330 (410)
T 1vyh_C 327 TGMC 330 (410)
T ss_dssp TTEE
T ss_pred CCce
Confidence 8754
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.7e-37 Score=229.55 Aligned_cols=191 Identities=20% Similarity=0.350 Sum_probs=176.2
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
++++|...|.+++|+|++.+++++ +.|+.|++||+ .+.+.+..+..+...+.+++|+|++++|++++.|+.|++
T Consensus 75 ~l~gh~~~v~~~~~~~~~~~l~s~---s~D~~i~lWd~---~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i 148 (321)
T 3ow8_A 75 SLEGHQLGVVSVDISHTLPIAASS---SLDAHIRLWDL---ENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNI 148 (321)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEE---ETTSEEEEEET---TTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEE
T ss_pred eeccCCCCEEEEEECCCCCEEEEE---eCCCcEEEEEC---CCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEE
Confidence 578999999999999999999999 68999999999 566777888888889999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDG 144 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg 144 (213)
||+++++....+..+...+.+++|+|++++|++++.|+.++ .+|.+++|+|++++|++|+.|+
T Consensus 149 ~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg 228 (321)
T 3ow8_A 149 FGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDG 228 (321)
T ss_dssp EETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTS
T ss_pred EEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCC
Confidence 99999988888888889999999999999999999999886 5789999999999999999999
Q ss_pred cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCccc
Q psy7433 145 DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 145 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
.|++||+++++....+.+|. ..|.+++|+|++ +|++++.|+.|++||+.+++.+
T Consensus 229 ~i~iwd~~~~~~~~~~~~h~----------~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~ 283 (321)
T 3ow8_A 229 YIKIYDVQHANLAGTLSGHA----------SWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCV 283 (321)
T ss_dssp CEEEEETTTCCEEEEECCCS----------SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred eEEEEECCCcceeEEEcCCC----------CceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEE
Confidence 99999999999988888876 789999999965 6999999999999999887543
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.2e-37 Score=228.02 Aligned_cols=186 Identities=20% Similarity=0.359 Sum_probs=171.5
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
++.+|...+.+++|+|++++|+++ +.++.|++|++ ...+....+..+...+.+++|+|++++|++++.|+.|++
T Consensus 117 ~~~~~~~~~~~~~~spdg~~l~~g---~~dg~v~i~~~---~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~i 190 (321)
T 3ow8_A 117 SIDAGPVDAWTLAFSPDSQYLATG---THVGKVNIFGV---ESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINI 190 (321)
T ss_dssp EEECCTTCCCCEEECTTSSEEEEE---CTTSEEEEEET---TTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred EEeCCCccEEEEEECCCCCEEEEE---cCCCcEEEEEc---CCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEE
Confidence 356778889999999999999999 78999999999 455666777788889999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDG 144 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg 144 (213)
||+++++.+..+.+|..+|.+++|+|++++|++++.|+.++ ..|.+++|+|++++|++++.|+
T Consensus 191 wd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~ 270 (321)
T 3ow8_A 191 FDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDK 270 (321)
T ss_dssp EETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCC
Confidence 99999999999999999999999999999999999999887 5699999999999999999999
Q ss_pred cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCC
Q psy7433 145 DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLP 203 (213)
Q Consensus 145 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~ 203 (213)
.|++||+++++++..+..|. ..|.+++|+|++ +|++++.|+.|++||.+
T Consensus 271 ~v~iwd~~~~~~~~~~~~h~----------~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 271 SVKVWDVGTRTCVHTFFDHQ----------DQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp CEEEEETTTTEEEEEECCCS----------SCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred cEEEEeCCCCEEEEEEcCCC----------CcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 99999999999999998876 789999999965 69999999999999974
No 5
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=4.8e-37 Score=226.89 Aligned_cols=193 Identities=21% Similarity=0.315 Sum_probs=173.1
Q ss_pred ccccccCceEEEEEeCCC-CeEEEeeccCCCccEEEEeCCCc--ccccceeeeeeecCCceEEEEecCCCEEEEEcCCCc
Q psy7433 2 TYQCHNKITSDFVFLGSC-SLVATAGHSSESKNVCLWDSLLP--QKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGD 78 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~-~~l~~~g~~s~~~~i~iwd~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 78 (213)
+|++|.+.|++++|+|++ ++|+++ +.|++|++|++... .....+..+.+|...|.+++|+|++++|++++.|+.
T Consensus 12 ~l~gH~~~V~~l~~~~~~~~~l~s~---s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~ 88 (319)
T 3frx_A 12 TLEGHNGWVTSLATSAGQPNLLLSA---SRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKT 88 (319)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEE---ETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEccccceEEEEEccCCCccEEEEe---cCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCE
Confidence 688999999999999965 799999 69999999998421 123456788899999999999999999999999999
Q ss_pred EEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------eceEEEEEccC------Cce
Q psy7433 79 ICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------SPVKCLAIDPH------EEF 136 (213)
Q Consensus 79 v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------~~v~~~~~~~~------~~~ 136 (213)
|++||+++++.+..+.+|...|.+++|+|++..+++++.|+.++ ..+.++.|+|. +.+
T Consensus 89 v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 168 (319)
T 3frx_A 89 LRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVT 168 (319)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCE
T ss_pred EEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccE
Confidence 99999999999999999999999999999999999999999887 56889999985 448
Q ss_pred EEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 137 FVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 137 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
+++++.|+.|++||+++.+....+.+|. ..|.+++|+|++ +|++++.||.|++||+.+++.
T Consensus 169 l~s~~~d~~i~~wd~~~~~~~~~~~~h~----------~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~ 230 (319)
T 3frx_A 169 IISAGNDKMVKAWNLNQFQIEADFIGHN----------SNINTLTASPDGTLIASAGKDGEIMLWNLAAKKA 230 (319)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCC----------SCEEEEEECTTSSEEEEEETTCEEEEEETTTTEE
T ss_pred EEEEeCCCEEEEEECCcchhheeecCCC----------CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 9999999999999999999888888876 789999999965 699999999999999988754
No 6
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.6e-37 Score=235.60 Aligned_cols=190 Identities=22% Similarity=0.412 Sum_probs=176.0
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
++++|.+.|.+++|+|++++|+++ +.|++|++||+ ...+++..+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 145 ~l~~h~~~V~~v~~~~~~~~l~sg---s~D~~i~iwd~---~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~ 218 (410)
T 1vyh_C 145 TLKGHTDSVQDISFDHSGKLLASC---SADMTIKLWDF---QGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKM 218 (410)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEE---ETTSCCCEEET---TSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEE
T ss_pred EEeccCCcEEEEEEcCCCCEEEEE---eCCCeEEEEeC---CCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEE
Confidence 578999999999999999999999 68999999999 566788888999999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccC-----------
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPH----------- 133 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~----------- 133 (213)
||++++..+..+.+|...+.++.++|++.++++++.|+.++ ..|.+++|+|+
T Consensus 219 wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~ 298 (410)
T 1vyh_C 219 WEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATG 298 (410)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCS
T ss_pred EECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhcc
Confidence 99999999999999999999999999999999999999887 56899999996
Q ss_pred ---------CceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCC
Q psy7433 134 ---------EEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLP 203 (213)
Q Consensus 134 ---------~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~ 203 (213)
+.+|++|+.|+.|++||++++.++..+.+|. ..|.+++|+|++ +|++++.|+.|++||+.
T Consensus 299 ~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~----------~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~ 368 (410)
T 1vyh_C 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD----------NWVRGVLFHSGGKFILSCADDKTLRVWDYK 368 (410)
T ss_dssp CC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCS----------SCEEEEEECSSSSCEEEEETTTEEEEECCT
T ss_pred ccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCC----------CcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 6689999999999999999999999998876 789999999965 69999999999999998
Q ss_pred CCcc
Q psy7433 204 DRDA 207 (213)
Q Consensus 204 ~~~~ 207 (213)
+++.
T Consensus 369 ~~~~ 372 (410)
T 1vyh_C 369 NKRC 372 (410)
T ss_dssp TSCC
T ss_pred CCce
Confidence 7654
No 7
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=5.7e-37 Score=228.56 Aligned_cols=188 Identities=20% Similarity=0.278 Sum_probs=162.1
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCC-CEEEEEcCCCcEEE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQH-QLLISAGKKGDICV 81 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~i 81 (213)
+.+|.+.|++++|+|++++|+++ +.|++|++||+ .+++.+..+.+|...|.+++|+|++ .+|++++.|+.|++
T Consensus 123 ~~~H~~~V~~v~~spdg~~l~sg---s~d~~i~iwd~---~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~i 196 (344)
T 4gqb_B 123 KYEHDDIVSTVSVLSSGTQAVSG---SKDICIKVWDL---AQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILL 196 (344)
T ss_dssp EECCSSCEEEEEECTTSSEEEEE---ETTSCEEEEET---TTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred ccCCCCCEEEEEECCCCCEEEEE---eCCCeEEEEEC---CCCcEEEEEcCcCCceEEEEecCCCCCceeeecccccccc
Confidence 45899999999999999999999 68999999999 5778888999999999999999987 57899999999999
Q ss_pred EeccCceEEEecc--cCCCCeeEEEecCC-CCEEEEecCCCcee-----------------eceEEEEEccCC-ceEEEe
Q psy7433 82 IDLRQRVIRSRFN--AHESPVKCLAIDPH-EEFFVTGAGDGDIK-----------------SPVKCLAIDPHE-EFFVTG 140 (213)
Q Consensus 82 wd~~~~~~~~~~~--~~~~~i~~~~~~~~-~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~-~~l~~~ 140 (213)
||+++++....+. .+...+.+++|+|+ +++|++++.|+.++ ..|++++|+|++ ++|++|
T Consensus 197 wd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasg 276 (344)
T 4gqb_B 197 WDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASL 276 (344)
T ss_dssp EETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEE
T ss_pred ccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEE
Confidence 9999998877764 34567899999995 56889999999886 789999999998 589999
Q ss_pred cCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC--eEEEEecCCcEEEEeCCCCcc
Q psy7433 141 AGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS--RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 141 ~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~d~~i~iw~~~~~~~ 207 (213)
+.|+.|++||+++++.. .+.+|. ..|++++|+|++ .|++++.|+.|++|++.++..
T Consensus 277 s~D~~i~vwd~~~~~~~-~~~~H~----------~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 277 SEDCSLAVLDSSLSELF-RSQAHR----------DFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp ETTSCEEEECTTCCEEE-EECCCS----------SCEEEEEECSSSTTEEEEEETTSCEEEEECCC---
T ss_pred eCCCeEEEEECCCCcEE-EEcCCC----------CCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCC
Confidence 99999999999988765 456665 789999999964 377999999999999987643
No 8
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.4e-36 Score=223.43 Aligned_cols=191 Identities=18% Similarity=0.351 Sum_probs=174.0
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
++++|.+.|++++|+|++++|+++ +.|+.|++|++ ...+....+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 18 ~~~gh~~~v~~~~~s~~~~~l~s~---~~dg~i~iw~~---~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~v 91 (312)
T 4ery_A 18 TLAGHTKAVSSVKFSPNGEWLASS---SADKLIKIWGA---YDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKI 91 (312)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEE---ETTSCEEEEET---TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EEcccCCcEEEEEECCCCCEEEEe---eCCCeEEEEeC---CCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEE
Confidence 578999999999999999999999 68999999998 456677788899999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDG 144 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg 144 (213)
||+++++.+..+..|...+.+++|+|+++++++++.|+.++ .++.+++|+|+++++++++.||
T Consensus 92 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 171 (312)
T 4ery_A 92 WDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 171 (312)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC
Confidence 99999999999999999999999999999999999999886 6799999999999999999999
Q ss_pred cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 145 DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 145 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
.|++||+++++.+..+..+. ...+..++|+|++ +|++++.|+.|++||+.+++.
T Consensus 172 ~i~~wd~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 226 (312)
T 4ery_A 172 LCRIWDTASGQCLKTLIDDD---------NPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC 226 (312)
T ss_dssp CEEEEETTTCCEEEEECCSS---------CCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEE
T ss_pred cEEEEECCCCceeeEEeccC---------CCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcE
Confidence 99999999988877765443 2579999999965 689999999999999988753
No 9
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=9.6e-37 Score=227.36 Aligned_cols=188 Identities=26% Similarity=0.289 Sum_probs=160.8
Q ss_pred ccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccce-eeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEec
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALV-QAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL 84 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~ 84 (213)
|...|.+++|+|++ .|+++ +.||+|+|||++..+..... ....+|...|++++|+|++++|++|+.|+.|++||+
T Consensus 81 ~~~~v~~~~~s~d~-~l~~~---s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~ 156 (344)
T 4gqb_B 81 TEAGVADLTWVGER-GILVA---SDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDL 156 (344)
T ss_dssp ESSCEEEEEEETTT-EEEEE---ETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred cCCCEEEEEEeCCC-eEEEE---ECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 56789999999986 56676 58999999999533222221 234579999999999999999999999999999999
Q ss_pred cCceEEEecccCCCCeeEEEecCCCC-EEEEecCCCcee-------------------eceEEEEEccC-CceEEEecCC
Q psy7433 85 RQRVIRSRFNAHESPVKCLAIDPHEE-FFVTGAGDGDIK-------------------SPVKCLAIDPH-EEFFVTGAGD 143 (213)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~~i~-------------------~~v~~~~~~~~-~~~l~~~~~d 143 (213)
++++.+..+.+|...|.+++|+|++. .|++++.|+.++ ..+.+++|+|+ ++++++|+.|
T Consensus 157 ~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~d 236 (344)
T 4gqb_B 157 AQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDEN 236 (344)
T ss_dssp TTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETT
T ss_pred CCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccC
Confidence 99999999999999999999999875 789999999886 45889999995 5688999999
Q ss_pred CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC--eEEEEecCCcEEEEeCCCCcc
Q psy7433 144 GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS--RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 144 g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~d~~i~iw~~~~~~~ 207 (213)
|.|++||+++++++..+.+|. ..|++++|+|++ +|++++.|+.|+|||+.+++.
T Consensus 237 g~v~~wd~~~~~~~~~~~~h~----------~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~ 292 (344)
T 4gqb_B 237 GTVSLVDTKSTSCVLSSAVHS----------QCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSEL 292 (344)
T ss_dssp SEEEEEESCC--CCEEEECCS----------SCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEE
T ss_pred CcEEEEECCCCcEEEEEcCCC----------CCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcE
Confidence 999999999999999998886 789999999964 589999999999999988753
No 10
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=9.2e-37 Score=223.26 Aligned_cols=190 Identities=18% Similarity=0.266 Sum_probs=165.0
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec--CCCEEEEEcCCCcE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP--QHQLLISAGKKGDI 79 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~v 79 (213)
++.+|.+.|++++|+|+|++||++ +.|++|+|||++. ...+.+..+.+|...|.+++|++ ++++|++++.|+.|
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~---s~D~~v~iw~~~~-~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v 79 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATC---SSDKTIKIFEVEG-ETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 79 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEE---ETTSCEEEEEBCS-SCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEE
T ss_pred eccCCcCceEEEEECCCCCEEEEE---eCCCEEEEEecCC-CCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEE
Confidence 578999999999999999999999 6899999999842 23467788899999999999986 48999999999999
Q ss_pred EEEeccCce--EEEecccCCCCeeEEEecCC--CCEEEEecCCCcee-------------------eceEEEEEccC---
Q psy7433 80 CVIDLRQRV--IRSRFNAHESPVKCLAIDPH--EEFFVTGAGDGDIK-------------------SPVKCLAIDPH--- 133 (213)
Q Consensus 80 ~iwd~~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~~~~i~-------------------~~v~~~~~~~~--- 133 (213)
++||+++++ .+..+..|...|.+++|+|+ +..|++++.|+.++ ..|.+++|+|+
T Consensus 80 ~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 159 (297)
T 2pm7_B 80 MIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 159 (297)
T ss_dssp EEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC--
T ss_pred EEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccc
Confidence 999998873 45567778999999999997 88999999999875 35789999997
Q ss_pred ----------CceEEEecCCCcEEEEEccCCe----eeeeecCCCCceeEEEecCCCeEEEEeCCC----CeEEEEecCC
Q psy7433 134 ----------EEFFVTGAGDGDIKVWSLSGNH----LLYNFPGEHARSSFFKHIGQGVTQLHVDGG----SRLFSCGADG 195 (213)
Q Consensus 134 ----------~~~l~~~~~dg~i~v~d~~~~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~l~s~~~d~ 195 (213)
+++|++|+.|+.|++||+++++ ....+.+|. ..|.+++|+|+ .+|++++.|+
T Consensus 160 ~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~----------~~V~~v~~sp~~~~~~~las~s~D~ 229 (297)
T 2pm7_B 160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS----------DWVRDVAWSPTVLLRSYMASVSQDR 229 (297)
T ss_dssp ----------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCS----------SCEEEEEECCCCSSSEEEEEEETTS
T ss_pred ccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCC----------CceEEEEECCCCCCceEEEEEECCC
Confidence 5699999999999999998755 556677775 78999999996 3699999999
Q ss_pred cEEEEeCCCC
Q psy7433 196 SMKVRQLPDR 205 (213)
Q Consensus 196 ~i~iw~~~~~ 205 (213)
.|++||+.+.
T Consensus 230 ~v~iWd~~~~ 239 (297)
T 2pm7_B 230 TCIIWTQDNE 239 (297)
T ss_dssp CEEEEEESST
T ss_pred cEEEEEeCCC
Confidence 9999999764
No 11
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=8.9e-37 Score=227.73 Aligned_cols=189 Identities=18% Similarity=0.268 Sum_probs=163.2
Q ss_pred ccccccC-ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEE
Q psy7433 2 TYQCHNK-ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDIC 80 (213)
Q Consensus 2 ~l~~h~~-~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 80 (213)
+|++|.. .|++++|+|+|++||++ +.|+.|+|||++............+|...|.+++|+|++++|++++.|+.++
T Consensus 10 ~~~~h~~~~v~~l~~sp~g~~las~---~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~ 86 (345)
T 3fm0_A 10 RVPAHPDSRCWFLAWNPAGTLLASC---GGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTC 86 (345)
T ss_dssp EECCSTTSCEEEEEECTTSSCEEEE---ETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eecCCCCCcEEEEEECCCCCEEEEE---cCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEE
Confidence 5788988 99999999999999999 6899999999842211111222357899999999999999999999999999
Q ss_pred EEeccCc--eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee--------------------eceEEEEEccCCceEE
Q psy7433 81 VIDLRQR--VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--------------------SPVKCLAIDPHEEFFV 138 (213)
Q Consensus 81 iwd~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------~~v~~~~~~~~~~~l~ 138 (213)
+||+.++ +.+..+.+|...|.+++|+|++++|++++.|+.++ ..|.+++|+|++++|+
T Consensus 87 iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~ 166 (345)
T 3fm0_A 87 IWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLA 166 (345)
T ss_dssp EEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEE
T ss_pred EEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEE
Confidence 9999876 45778889999999999999999999999999886 4688999999999999
Q ss_pred EecCCCcEEEEEccCCe--eeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCC
Q psy7433 139 TGAGDGDIKVWSLSGNH--LLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLP 203 (213)
Q Consensus 139 ~~~~dg~i~v~d~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~ 203 (213)
+++.|+.|++||++.++ +...+.+|. ..|.+++|+|++ +|++++.|+.|++|+..
T Consensus 167 s~s~d~~i~~w~~~~~~~~~~~~~~~h~----------~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 167 SASYDDTVKLYREEEDDWVCCATLEGHE----------STVWSLAFDPSGQRLASCSDDRTVRIWRQY 224 (345)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECCCS----------SCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred EEeCCCcEEEEEecCCCEEEEEEecCCC----------CceEEEEECCCCCEEEEEeCCCeEEEeccc
Confidence 99999999999998775 446677775 789999999965 69999999999999963
No 12
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.2e-36 Score=225.45 Aligned_cols=190 Identities=21% Similarity=0.365 Sum_probs=168.1
Q ss_pred ccccccCceEEEEE-----eC-CCCeEEEeeccCCCccEEEEeCCCcc----cccceeeeeeecCCceEEEEecCCCEEE
Q psy7433 2 TYQCHNKITSDFVF-----LG-SCSLVATAGHSSESKNVCLWDSLLPQ----KKALVQAFVCHDQGASSLVFAPQHQLLI 71 (213)
Q Consensus 2 ~l~~h~~~v~~~~~-----~~-~~~~l~~~g~~s~~~~i~iwd~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 71 (213)
+|++|.+.|++++| ++ ++++|+++ +.|++|++||+.... .......+.+|...|.+++|+|++.+++
T Consensus 16 ~l~gH~~~V~~~~~~~s~~~~~d~~~l~sg---s~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~ 92 (343)
T 2xzm_R 16 ILEGHSDWVTSIVAGFSQKENEDSPVLISG---SRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAI 92 (343)
T ss_dssp EEECCSSCEEEEEECCCSSTTCCCCEEEEE---ETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEE
T ss_pred eeccchhhhhheeeEEEeecCCCCCEEEEE---cCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEE
Confidence 58899999999999 76 89999999 689999999985322 2345667889999999999999999999
Q ss_pred EEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-------------------eceEEEEEcc
Q psy7433 72 SAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-------------------SPVKCLAIDP 132 (213)
Q Consensus 72 ~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-------------------~~v~~~~~~~ 132 (213)
+++.|+.|++||+++++.+..+.+|...|.+++|+|++++|++++.|+.++ ..+.+++|+|
T Consensus 93 s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~ 172 (343)
T 2xzm_R 93 SSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSP 172 (343)
T ss_dssp EEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECC
T ss_pred EEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeecc
Confidence 999999999999999999999999999999999999999999999999886 3589999999
Q ss_pred CC----------ceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEe
Q psy7433 133 HE----------EFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQ 201 (213)
Q Consensus 133 ~~----------~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~ 201 (213)
++ .++++++.|+.|++|| ...+....+..|. ..|.+++|+|++ +|++++.|+.|++||
T Consensus 173 ~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~----------~~v~~~~~s~~g~~l~sgs~dg~v~iwd 241 (343)
T 2xzm_R 173 IMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHE----------SNVNHLSISPNGKYIATGGKDKKLLIWD 241 (343)
T ss_dssp CCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCS----------SCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred ccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCcc----------ccceEEEECCCCCEEEEEcCCCeEEEEE
Confidence 87 7899999999999999 4556666777765 789999999975 699999999999999
Q ss_pred CCCC
Q psy7433 202 LPDR 205 (213)
Q Consensus 202 ~~~~ 205 (213)
+.+.
T Consensus 242 ~~~~ 245 (343)
T 2xzm_R 242 ILNL 245 (343)
T ss_dssp SSCC
T ss_pred CCCC
Confidence 9544
No 13
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1e-36 Score=227.05 Aligned_cols=183 Identities=21% Similarity=0.348 Sum_probs=168.5
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
.+.+|.+.|.++.|+|++. ++++ +.|+.|++||+ .+.+.+..+.+|...|.+++|+|+++++++|+.|+.|++
T Consensus 138 ~~~~h~~~v~~~~~~~~~~-l~s~---s~d~~i~~wd~---~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~ 210 (340)
T 1got_B 138 ELAGHTGYLSCCRFLDDNQ-IVTS---SGDTTCALWDI---ETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKL 210 (340)
T ss_dssp EEECCSSCEEEEEEEETTE-EEEE---ETTSCEEEEET---TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred EecCCCccEEEEEECCCCc-EEEE---ECCCcEEEEEC---CCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEE
Confidence 3568999999999998876 6666 58999999999 566778888899999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-------------------eceEEEEEccCCceEEEecC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-------------------SPVKCLAIDPHEEFFVTGAG 142 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-------------------~~v~~~~~~~~~~~l~~~~~ 142 (213)
||+++++....+.+|...|.+++|+|+++.|++++.|+.++ ..|.+++|+|++++|++|+.
T Consensus 211 wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~ 290 (340)
T 1got_B 211 WDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYD 290 (340)
T ss_dssp EETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEET
T ss_pred EECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECC
Confidence 99999999999999999999999999999999999999886 36899999999999999999
Q ss_pred CCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEe
Q psy7433 143 DGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQ 201 (213)
Q Consensus 143 dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~ 201 (213)
|+.|++||+++++.+..+.+|. ..|.+++|+|++ +|++++.|+.|++||
T Consensus 291 d~~i~vwd~~~~~~~~~~~~h~----------~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 291 DFNCNVWDALKADRAGVLAGHD----------NRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp TSEEEEEETTTCCEEEEEECCS----------SCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCeEEEEEcccCcEeeEeecCC----------CcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 9999999999999988888886 789999999976 599999999999997
No 14
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.6e-36 Score=224.77 Aligned_cols=189 Identities=19% Similarity=0.322 Sum_probs=171.1
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
+|++|.+.|++++|+|++++|+++ +.|+.|++||+ .+...+..+..|...|.+++|+|++++|++++.|+.+++
T Consensus 50 ~l~gH~~~v~~~~~s~d~~~l~s~---s~Dg~v~iWd~---~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~i 123 (340)
T 1got_B 50 TLRGHLAKIYAMHWGTDSRLLLSA---SQDGKLIIWDS---YTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSI 123 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEE---ETTTEEEEEET---TTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEE
T ss_pred eecCCCCceEEEEECCCCCEEEEE---eCCCcEEEEEC---CCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEE
Confidence 578999999999999999999999 68999999998 566677888889999999999999999999999999999
Q ss_pred EeccCc----eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEe
Q psy7433 82 IDLRQR----VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTG 140 (213)
Q Consensus 82 wd~~~~----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~ 140 (213)
||+.+. .....+.+|...+.++.|++++. +++++.|+.++ ..|.+++|+|+++++++|
T Consensus 124 w~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg 202 (340)
T 1got_B 124 YNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSG 202 (340)
T ss_dssp EETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEE
Confidence 999865 45567788999999999998765 88999999886 579999999999999999
Q ss_pred cCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 141 AGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 141 ~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
+.|+.|++||++++.....+..|. ..|.+++|+|++ .|++++.|+.|++||+++++.
T Consensus 203 ~~d~~v~~wd~~~~~~~~~~~~h~----------~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~ 260 (340)
T 1got_B 203 ACDASAKLWDVREGMCRQTFTGHE----------SDINAICFFPNGNAFATGSDDATCRLFDLRADQE 260 (340)
T ss_dssp ETTSCEEEEETTTCSEEEEECCCS----------SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred eCCCcEEEEECCCCeeEEEEcCCc----------CCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcE
Confidence 999999999999999998888876 789999999965 699999999999999987654
No 15
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.4e-36 Score=225.35 Aligned_cols=183 Identities=23% Similarity=0.336 Sum_probs=169.4
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec--CCCEEEEEcCCCcEE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP--QHQLLISAGKKGDIC 80 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~v~ 80 (213)
+.+|.+.|.+++|+|++..|+++ +.|++|++||+ .+.+.+..+.+|...|.+++|+| ++++|++|+.||.|+
T Consensus 150 ~~~h~~~v~~~~~~~~~~~l~t~---s~D~~v~lwd~---~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~ 223 (354)
T 2pbi_B 150 VAMHTNYLSACSFTNSDMQILTA---SGDGTCALWDV---ESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAM 223 (354)
T ss_dssp EEECSSCEEEEEECSSSSEEEEE---ETTSEEEEEET---TTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEE
T ss_pred eeccCCcEEEEEEeCCCCEEEEE---eCCCcEEEEeC---CCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEE
Confidence 56799999999999999999999 68999999999 56778888999999999999987 568999999999999
Q ss_pred EEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-------------------eceEEEEEccCCceEEEec
Q psy7433 81 VIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-------------------SPVKCLAIDPHEEFFVTGA 141 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-------------------~~v~~~~~~~~~~~l~~~~ 141 (213)
+||+++++.+..+..|...|.+++|+|++..|++++.|+.++ ..+.+++|+|++++|++|+
T Consensus 224 ~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~ 303 (354)
T 2pbi_B 224 VWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGY 303 (354)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEE
T ss_pred EEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEE
Confidence 999999999999999999999999999999999999999887 2578999999999999999
Q ss_pred CCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEe
Q psy7433 142 GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQ 201 (213)
Q Consensus 142 ~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~ 201 (213)
.|+.|++||+++++.+..+.+|. ..|.+++|+|++ +|++++.|+.|++|+
T Consensus 304 ~d~~i~vwd~~~~~~~~~l~~h~----------~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 304 NDYTINVWDVLKGSRVSILFGHE----------NRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp TTSCEEEEETTTCSEEEEECCCS----------SCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred CCCcEEEEECCCCceEEEEECCC----------CcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 99999999999999888888876 789999999975 699999999999996
No 16
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=9.8e-36 Score=222.11 Aligned_cols=196 Identities=22% Similarity=0.292 Sum_probs=164.6
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
++++|.+.|.+++|+|++++|+++ +.|+.|++||++.......+..+..|...|.+++|+|++++|++++.|+.|++
T Consensus 100 ~~~~h~~~v~~v~~sp~~~~l~s~---s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~ 176 (345)
T 3fm0_A 100 TLEGHENEVKSVAWAPSGNLLATC---SRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKL 176 (345)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEE---ETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEE
T ss_pred EccCCCCCceEEEEeCCCCEEEEE---ECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEE
Confidence 477999999999999999999999 68999999999654445567778889999999999999999999999999999
Q ss_pred EeccCce--EEEecccCCCCeeEEEecCCCCEEEEecCCCcee---------------------------------eceE
Q psy7433 82 IDLRQRV--IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------------------------SPVK 126 (213)
Q Consensus 82 wd~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------------------------~~v~ 126 (213)
||.++++ ....+.+|...|.+++|+|++++|++++.|+.++ ..|.
T Consensus 177 w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 256 (345)
T 3fm0_A 177 YREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIY 256 (345)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEE
T ss_pred EEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEE
Confidence 9998875 4467888999999999999999999999999886 2478
Q ss_pred EEEEccCCceEEEecCCCcEEEEEccCCee---------eeeecCCCCceeEEEecCCCeEEEEeCCCC--eEEEEecCC
Q psy7433 127 CLAIDPHEEFFVTGAGDGDIKVWSLSGNHL---------LYNFPGEHARSSFFKHIGQGVTQLHVDGGS--RLFSCGADG 195 (213)
Q Consensus 127 ~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~---------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~d~ 195 (213)
+++|+|++..|++++.|+.|++|+...... .....+| ...|++++|+|++ .|++++.||
T Consensus 257 ~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h----------~~~V~~v~~~p~~~~~laS~s~Dg 326 (345)
T 3fm0_A 257 DIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAH----------SQDVNCVAWNPKEPGLLASCSDDG 326 (345)
T ss_dssp EEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSS----------SSCEEEEEECSSSTTEEEEEETTS
T ss_pred EEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccc----------cCcEeEeEEeCCCceEEEEcCCCC
Confidence 899999999999999999999999865421 1112233 3789999999963 699999999
Q ss_pred cEEEEeCCCCccccc
Q psy7433 196 SMKVRQLPDRDAVVH 210 (213)
Q Consensus 196 ~i~iw~~~~~~~~~~ 210 (213)
.|++|++.+++.+.+
T Consensus 327 ~v~~W~~~~~~~~~~ 341 (345)
T 3fm0_A 327 EVAFWKYQRPEGLHH 341 (345)
T ss_dssp CEEEEEECC------
T ss_pred cEEEEEecCCCCccc
Confidence 999999998876543
No 17
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.2e-35 Score=222.55 Aligned_cols=188 Identities=18% Similarity=0.341 Sum_probs=161.1
Q ss_pred ccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCC-EEEEEcCCCcEEEE
Q psy7433 4 QCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQ-LLISAGKKGDICVI 82 (213)
Q Consensus 4 ~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~iw 82 (213)
.+|.+.|++++|+|++++|+++ +.|+.|++||+ .+.+.+..+.+|...|.+++|+|++. ++++++.|+.|++|
T Consensus 136 ~~h~~~V~~v~~spdg~~l~sg---s~dg~v~iwd~---~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~w 209 (357)
T 4g56_B 136 YEHDDIVKTLSVFSDGTQAVSG---GKDFSVKVWDL---SQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLW 209 (357)
T ss_dssp CCCSSCEEEEEECSSSSEEEEE---ETTSCEEEEET---TTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEEC
T ss_pred CCCCCCEEEEEECCCCCEEEEE---eCCCeEEEEEC---CCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEE
Confidence 4799999999999999999999 68999999999 56778888899999999999999874 78999999999999
Q ss_pred eccCceEEEecc--cCCCCeeEEEecCC-CCEEEEecCCCcee-----------------eceEEEEEccCC-ceEEEec
Q psy7433 83 DLRQRVIRSRFN--AHESPVKCLAIDPH-EEFFVTGAGDGDIK-----------------SPVKCLAIDPHE-EFFVTGA 141 (213)
Q Consensus 83 d~~~~~~~~~~~--~~~~~i~~~~~~~~-~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~-~~l~~~~ 141 (213)
|+++++....+. .+...+.+++|+|+ +.+|++++.|+.++ ..|.+++|+|++ ++|++|+
T Consensus 210 d~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs 289 (357)
T 4g56_B 210 DTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASIS 289 (357)
T ss_dssp CTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEE
T ss_pred ECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEe
Confidence 999987665543 46678999999997 46888999999886 789999999987 5899999
Q ss_pred CCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC-C-CeEEEEecCCcEEEEeCCCCccc
Q psy7433 142 GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG-G-SRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 142 ~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~-~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
.|+.|+|||+++++.+..+ +|. ..|++++|+| + .+|++++.||.|++|++.+..+.
T Consensus 290 ~D~~i~iwd~~~~~~~~~~-~H~----------~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~~ 347 (357)
T 4g56_B 290 EDCTVAVLDADFSEVFRDL-SHR----------DFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGRT 347 (357)
T ss_dssp TTSCEEEECTTSCEEEEEC-CCS----------SCEEEEEECSSSTTEEEEEETTSCEEEEECC-----
T ss_pred CCCEEEEEECCCCcEeEEC-CCC----------CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcc
Confidence 9999999999998887655 554 7899999998 4 46999999999999999865443
No 18
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=4.3e-36 Score=221.51 Aligned_cols=189 Identities=19% Similarity=0.253 Sum_probs=158.1
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec--CCCEEEEEcCCCcE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP--QHQLLISAGKKGDI 79 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~v 79 (213)
++.+|.+.|++++|+|+|++||++ +.|++|++||++.. ....+..+.+|...|.+++|+| ++++|++++.|+.|
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasg---s~D~~v~lwd~~~~-~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v 83 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATC---SSDRSVKIFDVRNG-GQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKV 83 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEE---ETTTEEEEEEEETT-EEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCE
T ss_pred ecccccCeEEEeeEcCCCCEEEEE---eCCCeEEEEEecCC-CcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEE
Confidence 567999999999999999999999 68999999998421 1235677889999999999986 48999999999999
Q ss_pred EEEeccCc--eEEEecccCCCCeeEEEecCC--CCEEEEecCCCcee--------------------eceEEEEEccC--
Q psy7433 80 CVIDLRQR--VIRSRFNAHESPVKCLAIDPH--EEFFVTGAGDGDIK--------------------SPVKCLAIDPH-- 133 (213)
Q Consensus 80 ~iwd~~~~--~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~~~~i~--------------------~~v~~~~~~~~-- 133 (213)
++||++++ +....+.+|...|.+++|+|+ +.+|++++.|+.++ ..+.+++|+|+
T Consensus 84 ~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 163 (316)
T 3bg1_A 84 IIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVV 163 (316)
T ss_dssp EEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCC
T ss_pred EEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccC
Confidence 99999987 456677889999999999997 78999999999776 34678899997
Q ss_pred ---------------CceEEEecCCCcEEEEEccCC---eeeeeecCCCCceeEEEecCCCeEEEEeCCC-----CeEEE
Q psy7433 134 ---------------EEFFVTGAGDGDIKVWSLSGN---HLLYNFPGEHARSSFFKHIGQGVTQLHVDGG-----SRLFS 190 (213)
Q Consensus 134 ---------------~~~l~~~~~dg~i~v~d~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~l~s 190 (213)
+++|++|+.|+.|++||++.. +++..+.+|. ..|.+++|+|+ ..|++
T Consensus 164 ~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~----------~~V~~v~~sp~~~~~~~~las 233 (316)
T 3bg1_A 164 PGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHS----------DWVRDVAWAPSIGLPTSTIAS 233 (316)
T ss_dssp C------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCS----------SCEEEEECCCCSSCSCCEEEE
T ss_pred CccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCC----------CceEEEEecCCCCCCCceEEE
Confidence 468999999999999999754 4666777776 78999999996 46999
Q ss_pred EecCCcEEEEeCCC
Q psy7433 191 CGADGSMKVRQLPD 204 (213)
Q Consensus 191 ~~~d~~i~iw~~~~ 204 (213)
++.|+.|++|++.+
T Consensus 234 ~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 234 CSQDGRVFIWTCDD 247 (316)
T ss_dssp EETTCEEEEEECSS
T ss_pred EcCCCeEEEEEccC
Confidence 99999999999876
No 19
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=2.5e-35 Score=221.45 Aligned_cols=186 Identities=12% Similarity=0.107 Sum_probs=153.9
Q ss_pred ccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEecc
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLR 85 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~ 85 (213)
+...+++++|+|||+++++++. +.|++|+|||+ .+.+.+..+. |...|.+++|+|++++|++++.+ .+.+|+..
T Consensus 132 ~~~~~~~v~fSpDg~~la~as~-~~d~~i~iwd~---~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~ 205 (365)
T 4h5i_A 132 ADDYTKLVYISREGTVAAIASS-KVPAIMRIIDP---SDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTV 205 (365)
T ss_dssp TTCCEEEEEECTTSSCEEEEES-CSSCEEEEEET---TTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETT
T ss_pred cccCEEEEEEcCCCCEEEEEEC-CCCCEEEEeEC---CCCcEEEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEec
Confidence 4456899999999999875531 57999999999 4556666654 77889999999999999999865 56667666
Q ss_pred CceEEE--ecccCCCCeeEEEecCCCCEEEEecCCCc----ee---------------------eceEEEEEccCCceEE
Q psy7433 86 QRVIRS--RFNAHESPVKCLAIDPHEEFFVTGAGDGD----IK---------------------SPVKCLAIDPHEEFFV 138 (213)
Q Consensus 86 ~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~~~~----i~---------------------~~v~~~~~~~~~~~l~ 138 (213)
+++.+. ....|...+.+++|+|+++.+++++.++. +. ..|++++|+|+|++|+
T Consensus 206 ~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~la 285 (365)
T 4h5i_A 206 TGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAV 285 (365)
T ss_dssp TCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEE
T ss_pred cCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceE
Confidence 665443 33457788999999999999999988763 21 5689999999999999
Q ss_pred EecCCCcEEEEEccCCeeeeee-cCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 139 TGAGDGDIKVWSLSGNHLLYNF-PGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 139 ~~~~dg~i~v~d~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
+|+.|+.|+|||+++++++..+ .+|. ..|++++|+|++ +|+|++.|++|+||+++....
T Consensus 286 sgs~D~~V~iwd~~~~~~~~~~~~gH~----------~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~~~ 346 (365)
T 4h5i_A 286 LASNDNSIALVKLKDLSMSKIFKQAHS----------FAITEVTISPDSTYVASVSAANTIHIIKLPLNYA 346 (365)
T ss_dssp EEETTSCEEEEETTTTEEEEEETTSSS----------SCEEEEEECTTSCEEEEEETTSEEEEEECCTTTT
T ss_pred EEcCCCEEEEEECCCCcEEEEecCccc----------CCEEEEEECCCCCEEEEEeCCCeEEEEEcCCCCc
Confidence 9999999999999999999875 5665 789999999976 599999999999999976543
No 20
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4e-35 Score=217.60 Aligned_cols=189 Identities=18% Similarity=0.266 Sum_probs=156.8
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcc----cccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEE
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQ----KKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDIC 80 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 80 (213)
+|.+.|++++|+|++++|+++ +.|++|++||++... ....+..+.+|...|.+++|+|++++|++++.|+.|+
T Consensus 56 ~h~~~v~~v~~sp~~~~las~---s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~ 132 (330)
T 2hes_X 56 AHKKAIRSVAWRPHTSLLAAG---SFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVW 132 (330)
T ss_dssp CCCSCEEEEEECTTSSEEEEE---ETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEE
T ss_pred CccCCEEEEEECCCCCEEEEE---eCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEE
Confidence 399999999999999999999 689999999984321 2345667889999999999999999999999999999
Q ss_pred EEeccC----ceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-------------------eceEEEEEccC--Cc
Q psy7433 81 VIDLRQ----RVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-------------------SPVKCLAIDPH--EE 135 (213)
Q Consensus 81 iwd~~~----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-------------------~~v~~~~~~~~--~~ 135 (213)
+||++. .+.+..+.+|...|.+++|+|++.+|++++.|+.++ ..|.+++|+|+ +.
T Consensus 133 iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 212 (330)
T 2hes_X 133 IWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVF 212 (330)
T ss_dssp EEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSC
T ss_pred EEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCee
Confidence 999953 256677888999999999999999999999999886 56889999998 66
Q ss_pred eEEEecCCCcEEEEEccCC--------eeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCC
Q psy7433 136 FFVTGAGDGDIKVWSLSGN--------HLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 136 ~l~~~~~dg~i~v~d~~~~--------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 205 (213)
+|++++.|+.|++||++.+ .....+... +...|.+++|++++.|++++.||.|++|+..++
T Consensus 213 ~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~---------h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~ 281 (330)
T 2hes_X 213 RLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDV---------HKRQVYNVAWGFNGLIASVGADGVLAVYEEVDG 281 (330)
T ss_dssp EEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSC---------CSSCEEEEEECTTSCEEEEETTSCEEEEEEETT
T ss_pred EEEEEeCCCeEEEEEecCCCccccceeEEeeecccc---------cccceEEEEEcCCCEEEEEeCCCEEEEEEcCCC
Confidence 8999999999999999754 233334331 237899999999889999999999999998765
No 21
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=4.3e-35 Score=219.34 Aligned_cols=190 Identities=17% Similarity=0.264 Sum_probs=168.7
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
+|++|.+.|++++|+|++++|+++ +.|++|++||. .+.+....+..|...|.+++|+|++++|++++.|+.+++
T Consensus 59 ~l~gH~~~V~~~~~s~d~~~l~s~---s~Dg~v~vWd~---~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v 132 (354)
T 2pbi_B 59 TLKGHGNKVLCMDWCKDKRRIVSS---SQDGKVIVWDS---FTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSV 132 (354)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEE---ETTSEEEEEET---TTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEE
T ss_pred EecCCCCeEEEEEECCCCCEEEEE---eCCCeEEEEEC---CCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEE
Confidence 578999999999999999999999 68999999998 456666777788899999999999999999999999999
Q ss_pred EeccCc------eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEcc--CCce
Q psy7433 82 IDLRQR------VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDP--HEEF 136 (213)
Q Consensus 82 wd~~~~------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~--~~~~ 136 (213)
|++... .....+..|...+.+++|+|++..|++++.|+.++ ..|.+++|+| ++++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~ 212 (354)
T 2pbi_B 133 YPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNT 212 (354)
T ss_dssp EECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCE
T ss_pred EEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCE
Confidence 998643 23445667999999999999999999999999886 5688899987 4689
Q ss_pred EEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 137 FVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 137 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
|++|+.||.|++||+++++++..+..|. ..|++++|+|++ .|++++.|+.|++||++....
T Consensus 213 l~sgs~Dg~v~~wd~~~~~~~~~~~~h~----------~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~ 274 (354)
T 2pbi_B 213 FVSGGCDKKAMVWDMRSGQCVQAFETHE----------SDVNSVRYYPSGDAFASGSDDATCRLYDLRADRE 274 (354)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCS----------SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEecCCC----------CCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 9999999999999999999999988876 789999999964 699999999999999987643
No 22
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3.5e-35 Score=220.05 Aligned_cols=190 Identities=22% Similarity=0.283 Sum_probs=160.1
Q ss_pred ccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccc-eeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEE
Q psy7433 4 QCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKAL-VQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVI 82 (213)
Q Consensus 4 ~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iw 82 (213)
.+|...|.+++|+|++.+++++ .|++|+|||+...+.... .....+|...|.+++|+|++++|++++.|+.|++|
T Consensus 91 ~~~~~~V~~~~~s~d~~~l~~s----~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iw 166 (357)
T 4g56_B 91 VQTEAGVTDVAWVSEKGILVAS----DSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVW 166 (357)
T ss_dssp EECSSCEEEEEEETTTEEEEEE----TTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEE
T ss_pred CCCCCCEEEEEEcCCCCEEEEE----CCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 4688899999999998777654 799999999953322211 12344788999999999999999999999999999
Q ss_pred eccCceEEEecccCCCCeeEEEecCCCC-EEEEecCCCcee-------------------eceEEEEEccCC-ceEEEec
Q psy7433 83 DLRQRVIRSRFNAHESPVKCLAIDPHEE-FFVTGAGDGDIK-------------------SPVKCLAIDPHE-EFFVTGA 141 (213)
Q Consensus 83 d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~~i~-------------------~~v~~~~~~~~~-~~l~~~~ 141 (213)
|+++++.+..+..|...|.+++|+|++. .+++++.|+.++ ..+.+++|+|++ .+|++|+
T Consensus 167 d~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~ 246 (357)
T 4g56_B 167 DLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGD 246 (357)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEE
T ss_pred ECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEee
Confidence 9999999999999999999999999875 789999999886 568999999985 5889999
Q ss_pred CCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC--eEEEEecCCcEEEEeCCCCcc
Q psy7433 142 GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS--RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 142 ~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~d~~i~iw~~~~~~~ 207 (213)
.|+.|++||+++++.+..+..+. ..|++++|+|++ +|++++.|+.|+|||+.+++.
T Consensus 247 ~d~~i~~wd~~~~~~~~~~~~~~----------~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~ 304 (357)
T 4g56_B 247 ETGNVSLVNIKNPDSAQTSAVHS----------QNITGLAYSYHSSPFLASISEDCTVAVLDADFSEV 304 (357)
T ss_dssp SSSCEEEEESSCGGGCEEECCCS----------SCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEE
T ss_pred cccceeEEECCCCcEeEEEeccc----------eeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcE
Confidence 99999999999999998888876 789999999854 589999999999999988754
No 23
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.3e-35 Score=215.60 Aligned_cols=188 Identities=18% Similarity=0.261 Sum_probs=157.7
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeee-ee-ecCCceEEEEecCCCEEEEEcCCCcE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAF-VC-HDQGASSLVFAPQHQLLISAGKKGDI 79 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~~d~~v 79 (213)
+|++|.++|++++|+|+ +||++ +.|+.|++||++.. ....+..+ .. |...|.+++|+|++++|++++.|+.|
T Consensus 9 ~~~~h~~~v~~~~~s~~--~las~---~~D~~i~lw~~~~~-~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v 82 (330)
T 2hes_X 9 SLKLYKEKIWSFDFSQG--ILATG---STDRKIKLVSVKYD-DFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTV 82 (330)
T ss_dssp EEECCSSCEEEEEEETT--EEEEE---ESSSCEEEEECSSS-CCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCE
T ss_pred eeccCCCceeeeccCCC--EEEEE---cCCCEEEEEEecCC-CeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcE
Confidence 57899999999999987 89998 68999999998532 12334444 33 88999999999999999999999999
Q ss_pred EEEeccC-------ceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee---------------------eceEEEEEc
Q psy7433 80 CVIDLRQ-------RVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------------SPVKCLAID 131 (213)
Q Consensus 80 ~iwd~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------------~~v~~~~~~ 131 (213)
++||++. .+.+..+.+|...|.+++|+|++++|++++.|+.++ ..|.+++|+
T Consensus 83 ~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~ 162 (330)
T 2hes_X 83 SIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWH 162 (330)
T ss_dssp EEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEEC
T ss_pred EEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEEC
Confidence 9999853 356677888999999999999999999999999876 468899999
Q ss_pred cCCceEEEecCCCcEEEEEccCC--eeeeeecCCCCceeEEEecCCCeEEEEeCCC--C-eEEEEecCCcEEEEeCCCC
Q psy7433 132 PHEEFFVTGAGDGDIKVWSLSGN--HLLYNFPGEHARSSFFKHIGQGVTQLHVDGG--S-RLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 132 ~~~~~l~~~~~dg~i~v~d~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~-~l~s~~~d~~i~iw~~~~~ 205 (213)
|++++|++++.|+.|++||.+.+ +++..+.+|. ..|.+++|+|+ + +|++++.|+.|++||+..+
T Consensus 163 p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~----------~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~ 231 (330)
T 2hes_X 163 PSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHE----------GTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGD 231 (330)
T ss_dssp SSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCS----------SCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCC----------CcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCC
Confidence 99999999999999999999866 5777788776 78999999986 3 5899999999999998653
No 24
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1e-34 Score=215.31 Aligned_cols=191 Identities=19% Similarity=0.311 Sum_probs=155.7
Q ss_pred ccccccCceEEEEEeCC-CCeEEEeeccCCCccEEEEeCCCccc--ccceeeeeeecCCceEEEEecCCCEEEEEcCCCc
Q psy7433 2 TYQCHNKITSDFVFLGS-CSLVATAGHSSESKNVCLWDSLLPQK--KALVQAFVCHDQGASSLVFAPQHQLLISAGKKGD 78 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~-~~~l~~~g~~s~~~~i~iwd~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 78 (213)
+|+||.+.|++++|+|+ +++||++ +.|++|+|||++.... ..+...+.+|...|.+++|+|++++|++++.|+.
T Consensus 33 tL~GH~~~V~~v~~sp~~~~~l~S~---s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~ 109 (340)
T 4aow_A 33 TLKGHNGWVTQIATTPQFPDMILSA---SRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGT 109 (340)
T ss_dssp EECCCSSCEEEEEECTTCTTEEEEE---ETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EECCccCCEEEEEEeCCCCCEEEEE---cCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEccccc
Confidence 68999999999999997 6899999 6899999999854322 2356678889999999999999999999999999
Q ss_pred EEEEeccCceEEEecccCCCCeeEEEecCCCCEEE---------------------------------------------
Q psy7433 79 ICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFV--------------------------------------------- 113 (213)
Q Consensus 79 v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~--------------------------------------------- 113 (213)
|++|+............+...+....+++++..|+
T Consensus 110 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 189 (340)
T 4aow_A 110 LRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIV 189 (340)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEE
T ss_pred ceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEE
Confidence 99999987655444444444444444444444444
Q ss_pred EecCCCcee-----------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCC
Q psy7433 114 TGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQG 176 (213)
Q Consensus 114 ~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (213)
+++.|+.++ ..|.+++|+|++++|++|+.|+.|++||+++.+.+..+..+ ..
T Consensus 190 s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-----------~~ 258 (340)
T 4aow_A 190 SCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-----------DI 258 (340)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS-----------SC
T ss_pred EEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC-----------ce
Confidence 444444443 57899999999999999999999999999999998888765 57
Q ss_pred eEEEEeCCCCeEEEEecCCcEEEEeCCCCc
Q psy7433 177 VTQLHVDGGSRLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 177 v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 206 (213)
|.++.|+|++.+++++.|+.|++||+.+..
T Consensus 259 v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~ 288 (340)
T 4aow_A 259 INALCFSPNRYWLCAATGPSIKIWDLEGKI 288 (340)
T ss_dssp EEEEEECSSSSEEEEEETTEEEEEETTTTE
T ss_pred EEeeecCCCCceeeccCCCEEEEEECCCCe
Confidence 999999999999999999999999998764
No 25
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.2e-34 Score=215.02 Aligned_cols=194 Identities=16% Similarity=0.232 Sum_probs=165.4
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcc-cccceeeeeeecCCceEEEEec--CCCEEEEEcCCCc
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQ-KKALVQAFVCHDQGASSLVFAP--QHQLLISAGKKGD 78 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~-~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~ 78 (213)
.+++|.+.|++++|+|++++|+++ +.|+.|++||++... .......+.+|...|.+++|+| ++++|++++.||.
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~---~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~ 82 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATC---SSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKT 82 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEE---ETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred cCcccccceeEEEEcCCCCEEEEe---eCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCe
Confidence 467999999999999999999999 689999999985321 1246677788999999999999 6999999999999
Q ss_pred EEEEeccCc---------eEEEecccCCCCeeEEEecCC--CCEEEEecCCCcee-------------------------
Q psy7433 79 ICVIDLRQR---------VIRSRFNAHESPVKCLAIDPH--EEFFVTGAGDGDIK------------------------- 122 (213)
Q Consensus 79 v~iwd~~~~---------~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~~~~i~------------------------- 122 (213)
|++||++++ +.+..+..|...+.+++|+|+ +.++++++.|+.++
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 162 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIP 162 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCC
T ss_pred EEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccc
Confidence 999999886 567788889999999999999 99999999988654
Q ss_pred ----------------------------------------------------eceEEEEEccCC----ceEEEecCCCcE
Q psy7433 123 ----------------------------------------------------SPVKCLAIDPHE----EFFVTGAGDGDI 146 (213)
Q Consensus 123 ----------------------------------------------------~~v~~~~~~~~~----~~l~~~~~dg~i 146 (213)
..|.+++|+|++ ++|++++.||.|
T Consensus 163 ~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i 242 (351)
T 3f3f_A 163 PANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRI 242 (351)
T ss_dssp CSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCE
T ss_pred cCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeE
Confidence 357899999998 899999999999
Q ss_pred EEEEccCC----------------------------------------------eeeeeecCCCCceeEEEecCCCeEEE
Q psy7433 147 KVWSLSGN----------------------------------------------HLLYNFPGEHARSSFFKHIGQGVTQL 180 (213)
Q Consensus 147 ~v~d~~~~----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~v~~~ 180 (213)
++||++.+ +.+..+.+| ...|+++
T Consensus 243 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h----------~~~v~~~ 312 (351)
T 3f3f_A 243 RIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDH----------NGEVWSV 312 (351)
T ss_dssp EEEEEEECC---------------------------------------CCSEEEEEEEEECTT----------SSCEEEE
T ss_pred EEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecc----------cccEEEE
Confidence 99999864 333334443 4789999
Q ss_pred EeCCCC-eEEEEecCCcEEEEeCCCCccc
Q psy7433 181 HVDGGS-RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 181 ~~~~~~-~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
+|+|++ +|++++.||.|++|++.+++..
T Consensus 313 ~~s~~~~~l~s~~~dg~v~iw~~~~~~~~ 341 (351)
T 3f3f_A 313 SWNLTGTILSSAGDDGKVRLWKATYSNEF 341 (351)
T ss_dssp EECSSSCCEEEEETTSCEEEEEECTTSCE
T ss_pred EEcCCCCEEEEecCCCcEEEEecCcCcch
Confidence 999965 6999999999999999987543
No 26
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=7e-35 Score=235.38 Aligned_cols=194 Identities=23% Similarity=0.346 Sum_probs=173.3
Q ss_pred ccccccCceEEEEEeCCC-CeEEEeeccCCCccEEEEeCCCccc--ccceeeeeeecCCceEEEEecCCCEEEEEcCCCc
Q psy7433 2 TYQCHNKITSDFVFLGSC-SLVATAGHSSESKNVCLWDSLLPQK--KALVQAFVCHDQGASSLVFAPQHQLLISAGKKGD 78 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~-~~l~~~g~~s~~~~i~iwd~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 78 (213)
.|++|.+.|++++|+|++ ++|+++ +.|++|++|++..... ......+.+|...|.+++|+|++++|++|+.|+.
T Consensus 377 ~l~~H~~~V~~v~~~~~~~~~l~s~---s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~ 453 (694)
T 3dm0_A 377 TMRAHTDMVTAIATPIDNADIIVSA---SRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGE 453 (694)
T ss_dssp EEECCSSCEEEEECCTTCCSEEEEE---ETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred hcccCCceeEEEEecCCCCCEEEEE---eCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCc
Confidence 478999999999999864 789998 6899999999853221 2345678899999999999999999999999999
Q ss_pred EEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee--------------------eceEEEEEccCC--ce
Q psy7433 79 ICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--------------------SPVKCLAIDPHE--EF 136 (213)
Q Consensus 79 v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------~~v~~~~~~~~~--~~ 136 (213)
|++||+.+++....+.+|...|.+++|+|+++.|++++.|+.++ ..|.+++|+|++ .+
T Consensus 454 v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 533 (694)
T 3dm0_A 454 LRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPT 533 (694)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCE
T ss_pred EEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcce
Confidence 99999999999999999999999999999999999999999886 348999999987 58
Q ss_pred EEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCccc
Q psy7433 137 FVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 137 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
+++++.|+.|++||+++++....+.+|. ..|++++|+|++ +|++++.||.|++||+.+++.+
T Consensus 534 l~s~s~d~~v~vwd~~~~~~~~~~~~h~----------~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~ 596 (694)
T 3dm0_A 534 IVSASWDKTVKVWNLSNCKLRSTLAGHT----------GYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKL 596 (694)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCS----------SCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEcCCC----------CCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceE
Confidence 9999999999999999999988888876 789999999965 6899999999999999987543
No 27
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.2e-34 Score=212.65 Aligned_cols=186 Identities=20% Similarity=0.352 Sum_probs=166.3
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
+|++|...|.+++|+|++++|+++ +.|++|++||+ .+++.+..+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 60 ~~~~h~~~v~~~~~s~dg~~l~s~---s~D~~v~~wd~---~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~v 133 (319)
T 3frx_A 60 SFKGHSHIVQDCTLTADGAYALSA---SWDKTLRLWDV---ATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKV 133 (319)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEE---ETTSEEEEEET---TTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEE
T ss_pred EEeCCcccEEEEEECCCCCEEEEE---eCCCEEEEEEC---CCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 478999999999999999999999 68999999999 567788889999999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCC------CCEEEEecCCCcee-----------------eceEEEEEccCCceEE
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPH------EEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFV 138 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~------~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~ 138 (213)
||++ ++.+..+.+|...+.++++.|. +..+++++.|+.++ ..|.+++|+|++++|+
T Consensus 134 wd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~ 212 (319)
T 3frx_A 134 WTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIA 212 (319)
T ss_dssp EETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEE
T ss_pred EECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEE
Confidence 9997 4566777889999999999985 44899999999886 6799999999999999
Q ss_pred EecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCC
Q psy7433 139 TGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 139 ~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 205 (213)
+++.||.|++||+++++.+..+..+ ..|.+++|+|++.+++++.++.+++|++...
T Consensus 213 s~~~dg~i~iwd~~~~~~~~~~~~~-----------~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~ 268 (319)
T 3frx_A 213 SAGKDGEIMLWNLAAKKAMYTLSAQ-----------DEVFSLAFSPNRYWLAAATATGIKVFSLDPQ 268 (319)
T ss_dssp EEETTCEEEEEETTTTEEEEEEECC-----------SCEEEEEECSSSSEEEEEETTEEEEEEETTE
T ss_pred EEeCCCeEEEEECCCCcEEEEecCC-----------CcEEEEEEcCCCCEEEEEcCCCcEEEEeCcC
Confidence 9999999999999999998888764 5799999999887555566677999998765
No 28
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.9e-34 Score=214.98 Aligned_cols=188 Identities=23% Similarity=0.417 Sum_probs=160.2
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
++.+|...|.+++|+|++.+++++ +.|++|++||+ .+.+.+..+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 71 ~l~~h~~~V~~~~~~~~~~~l~s~---s~D~~v~lwd~---~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~ 144 (343)
T 2xzm_R 71 ALTGHNHFVSDLALSQENCFAISS---SWDKTLRLWDL---RTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKL 144 (343)
T ss_dssp EECCCSSCEEEEEECSSTTEEEEE---ETTSEEEEEET---TSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEE
T ss_pred hhccCCCceEEEEECCCCCEEEEE---cCCCcEEEEEC---CCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEE
Confidence 467899999999999999999999 68999999999 566778888999999999999999999999999999999
Q ss_pred EeccCceEEEec--ccCCCCeeEEEecCCC----------CEEEEecCCCcee----------------eceEEEEEccC
Q psy7433 82 IDLRQRVIRSRF--NAHESPVKCLAIDPHE----------EFFVTGAGDGDIK----------------SPVKCLAIDPH 133 (213)
Q Consensus 82 wd~~~~~~~~~~--~~~~~~i~~~~~~~~~----------~~l~~~~~~~~i~----------------~~v~~~~~~~~ 133 (213)
||+......... ..|...+.+++|+|++ .+|++++.|+.++ ..|.+++|+|+
T Consensus 145 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~ 224 (343)
T 2xzm_R 145 WNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPN 224 (343)
T ss_dssp EESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEECCSSCEEEEEECTT
T ss_pred EeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCccccceEEEECCC
Confidence 999854333222 2678899999999986 7899999999876 57999999999
Q ss_pred CceEEEecCCCcEEEEEccC-CeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCc
Q psy7433 134 EEFFVTGAGDGDIKVWSLSG-NHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 134 ~~~l~~~~~dg~i~v~d~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 206 (213)
+++|++|+.||.|++||++. ......+.. +..|.+++|+|++.+++++.|+.|++|++.+.+
T Consensus 225 g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~-----------~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~ 287 (343)
T 2xzm_R 225 GKYIATGGKDKKLLIWDILNLTYPQREFDA-----------GSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQS 287 (343)
T ss_dssp SSEEEEEETTCEEEEEESSCCSSCSEEEEC-----------SSCEEEEEECSSSCEEEEEESSCEEEEESSSCC
T ss_pred CCEEEEEcCCCeEEEEECCCCcccceeecC-----------CCcEEEEEECCCCCEEEEECCCCEEEEEeCCCC
Confidence 99999999999999999943 333333322 257999999998887778889999999998654
No 29
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3.7e-34 Score=210.61 Aligned_cols=193 Identities=19% Similarity=0.345 Sum_probs=169.2
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
++.+|...|.+++|+|++++|+++ +.|+.|++||+ .+.+.+..+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 60 ~~~~h~~~v~~~~~~~~~~~l~s~---~~d~~i~vwd~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~i 133 (312)
T 4ery_A 60 TISGHKLGISDVAWSSDSNLLVSA---SDDKTLKIWDV---SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 133 (312)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEE---ETTSEEEEEET---TTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEE
T ss_pred hhccCCCceEEEEEcCCCCEEEEE---CCCCEEEEEEC---CCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEE
Confidence 467899999999999999999999 68999999999 566778888999999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------eceEEEEEccCCceEEEecCC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPVKCLAIDPHEEFFVTGAGD 143 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v~~~~~~~~~~~l~~~~~d 143 (213)
||+++++.+..+..|..++.+++|+|+++.|++++.|+.++ ..+..++|+|++++|++++.|
T Consensus 134 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 213 (312)
T 4ery_A 134 WDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 213 (312)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETT
T ss_pred EECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCC
Confidence 99999999999999999999999999999999999999886 468889999999999999999
Q ss_pred CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC-CCeEEEEecCCcEEEEeCCCCcc
Q psy7433 144 GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG-GSRLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 144 g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s~~~d~~i~iw~~~~~~~ 207 (213)
+.|++||+++++.+..+..|.... ..+......+ +.+|++++.||.|++||+.+++.
T Consensus 214 ~~i~iwd~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~ 271 (312)
T 4ery_A 214 NTLKLWDYSKGKCLKTYTGHKNEK-------YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEI 271 (312)
T ss_dssp TEEEEEETTTTEEEEEECSSCCSS-------SCCCEEEECSSSCEEEECCTTSCEEEEETTTCCE
T ss_pred CeEEEEECCCCcEEEEEEecCCce-------EEEEEEEEeCCCcEEEEECCCCEEEEEECCCchh
Confidence 999999999999998888765321 1122222223 45699999999999999988754
No 30
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2e-35 Score=223.09 Aligned_cols=190 Identities=17% Similarity=0.331 Sum_probs=166.5
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
+|++|.+.|++++|+|++++|+++ +.|++|++||+ .+.+....+..|...|.+++|+|++++|++|+.|+.+++
T Consensus 61 ~l~gH~~~V~~~~~sp~~~~l~s~---s~D~~v~iWd~---~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~i 134 (380)
T 3iz6_a 61 TLQGHSGKVYSLDWTPEKNWIVSA---SQDGRLIVWNA---LTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSI 134 (380)
T ss_dssp EECCCSSCEEEEEECTTSSCEEEE---ETTSEEEEEET---TTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEE
T ss_pred cccccccEEEEEEEcCCCCEEEEE---eCCCeEEEEEC---CCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEE
Confidence 588999999999999999999999 78999999998 566777888899999999999999999999999999999
Q ss_pred EeccCce-------EEEecccCCCCeeEEEecCC-CCEEEEecCCCcee----------------------eceEEEEEc
Q psy7433 82 IDLRQRV-------IRSRFNAHESPVKCLAIDPH-EEFFVTGAGDGDIK----------------------SPVKCLAID 131 (213)
Q Consensus 82 wd~~~~~-------~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~~~~i~----------------------~~v~~~~~~ 131 (213)
||+.+.. ....+.+|...+.++.|.|+ +..|++++.|+.++ ..+.+++|+
T Consensus 135 w~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 214 (380)
T 3iz6_a 135 FNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSIN 214 (380)
T ss_dssp EECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEEC
T ss_pred EECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEee
Confidence 9997532 23456789999999999996 45799999999886 357889997
Q ss_pred c-CCceEEEecCCCcEEEEEcc-CCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 132 P-HEEFFVTGAGDGDIKVWSLS-GNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 132 ~-~~~~l~~~~~dg~i~v~d~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
| +++++++|+.|+.|++||++ ..+.+..+.+|. ..|.+++|+|++ +|++++.|+.|++||+.++..
T Consensus 215 ~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~----------~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~ 283 (380)
T 3iz6_a 215 SLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHE----------GDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQ 283 (380)
T ss_dssp SSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCS----------SCCCEEEECTTSSEEEEECSSSCEEEEETTTTEE
T ss_pred cCCCCEEEEEECCCeEEEEECCCCCcceEEECCcC----------CCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcE
Confidence 7 78899999999999999998 456777777776 789999999965 699999999999999998754
No 31
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=6.1e-35 Score=220.46 Aligned_cols=191 Identities=19% Similarity=0.322 Sum_probs=165.8
Q ss_pred ccccccCceEEEEEeCC-CCeEEEeeccCCCccEEEEeCCCcccccceeee-----eeecCCceEEEEec-CCCEEEEEc
Q psy7433 2 TYQCHNKITSDFVFLGS-CSLVATAGHSSESKNVCLWDSLLPQKKALVQAF-----VCHDQGASSLVFAP-QHQLLISAG 74 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~-~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~-----~~~~~~v~~~~~~~-~~~~l~~~~ 74 (213)
++.+|.+.|.++.|.|+ +..|+++ +.|++|++||++ +++.+..+ .+|...|.+++|++ ++++|++|+
T Consensus 152 ~~~gh~~~v~~~~~~~~~~~~l~s~---s~D~~i~~wd~~---~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs 225 (380)
T 3iz6_a 152 VLTGHKGYASSCQYVPDQETRLITG---SGDQTCVLWDVT---TGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGS 225 (380)
T ss_dssp BCCCCSSCCCCCBCCSSSSSCEEEE---CTTSCEEEECTT---TCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEE
T ss_pred eccCCCcceEEEEEecCCCCEEEEE---CCCCcEEEEEcC---CCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEE
Confidence 46799999999999996 4568888 799999999994 45555544 56888999999987 889999999
Q ss_pred CCCcEEEEecc-CceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------------eceEEEE
Q psy7433 75 KKGDICVIDLR-QRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------------SPVKCLA 129 (213)
Q Consensus 75 ~d~~v~iwd~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------------~~v~~~~ 129 (213)
.|+.|++||++ .++.+..+.+|...|.+++|+|++++|++++.|+.++ ..+.+++
T Consensus 226 ~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 305 (380)
T 3iz6_a 226 CDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVA 305 (380)
T ss_dssp TTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEE
T ss_pred CCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEE
Confidence 99999999998 4577788889999999999999999999999999987 1378999
Q ss_pred EccCCceEEEecCCCcEEEEEccCCeeeeee----cCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCC
Q psy7433 130 IDPHEEFFVTGAGDGDIKVWSLSGNHLLYNF----PGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 130 ~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~ 204 (213)
|+|+|++|++|+.||.|++||+..++....+ .+|. ..|.+++|+|++ .|++++.|+.|++|++..
T Consensus 306 ~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~----------~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 306 FSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHE----------GRISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp ECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCC----------CCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred ECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCC----------CceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 9999999999999999999999988877766 3343 789999999975 699999999999999987
Q ss_pred Cccc
Q psy7433 205 RDAV 208 (213)
Q Consensus 205 ~~~~ 208 (213)
.+++
T Consensus 376 ~~~i 379 (380)
T 3iz6_a 376 HRKI 379 (380)
T ss_dssp SSSC
T ss_pred Cccc
Confidence 7554
No 32
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.2e-34 Score=227.59 Aligned_cols=184 Identities=21% Similarity=0.365 Sum_probs=166.3
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
.|+||++.|++++|+|+|++||++ +.|+.|+|||. +.+.+..+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 11 ~L~GH~~~V~~~a~spdg~~las~---~~d~~v~iWd~----~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~v 83 (577)
T 2ymu_A 11 RLEAHSSSVRGVAFSPDGQTIASA---SDDKTVKLWNR----NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKL 83 (577)
T ss_dssp EECCCSSCEEEEEECTTSSCEEEE---ETTSEEEEECT----TSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred EECCCCCcEEEEEECCCCCEEEEE---eCCCEEEEEEC----CCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEE
Confidence 488999999999999999999999 68999999995 45678889999999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee---------------------------------------
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--------------------------------------- 122 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------------------------- 122 (213)
||+ +++.+..+.+|...|.+++|+|+++++++++.|+.++
T Consensus 84 Wd~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 162 (577)
T 2ymu_A 84 WNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKT 162 (577)
T ss_dssp EET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSE
T ss_pred EEC-CCCEEEEEECCCCCEEEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceecccccc
Confidence 995 5778888999999999999999999999999998764
Q ss_pred ------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC
Q psy7433 123 ------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG 184 (213)
Q Consensus 123 ------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 184 (213)
..+.++.++|+++++++++.|+.|++||. +++.+..+..|. ..|.+++|+|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~----------~~v~~~~~s~ 231 (577)
T 2ymu_A 163 VKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHS----------SSVRGVAFSP 231 (577)
T ss_dssp EEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCS----------SCEEEEEECT
T ss_pred eeccccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeC-CCcEEEEEecCC----------CCEEEEEECC
Confidence 56788999999999999999999999995 567777777775 7899999999
Q ss_pred CC-eEEEEecCCcEEEEeCCC
Q psy7433 185 GS-RLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 185 ~~-~l~s~~~d~~i~iw~~~~ 204 (213)
++ +|++++.|+.|++||...
T Consensus 232 dg~~l~~~~~d~~i~~w~~~~ 252 (577)
T 2ymu_A 232 DGQTIASASDDKTVKLWNRNG 252 (577)
T ss_dssp TSSCEEEEETTSCEEEECTTS
T ss_pred CCCEEEEEeCCCEEEEEeCCC
Confidence 75 699999999999999754
No 33
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.7e-34 Score=214.49 Aligned_cols=192 Identities=18% Similarity=0.272 Sum_probs=169.2
Q ss_pred CccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecC--CCEEEEEcCCCc
Q psy7433 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQ--HQLLISAGKKGD 78 (213)
Q Consensus 1 ~~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~ 78 (213)
.++++|.+.|++++|+|++++|+++ +.|+.|++||++. .....+..+.+|...|.+++|+++ +++|++++.||.
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~---~~dg~i~iw~~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 5 VIANAHNELIHDAVLDYYGKRLATC---SSDKTIKIFEVEG-ETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 80 (379)
T ss_dssp CCEEECCCCEEEEEECSSSSEEEEE---ETTSCEEEEEEET-TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred EEecCCcccEEEEEEcCCCCEEEEE---ECCCcEEEEecCC-CcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCE
Confidence 3688999999999999999999999 6899999999842 255677788899999999999976 899999999999
Q ss_pred EEEEeccCce--EEEecccCCCCeeEEEecCC--CCEEEEecCCCcee-------------------eceEEEEEcc---
Q psy7433 79 ICVIDLRQRV--IRSRFNAHESPVKCLAIDPH--EEFFVTGAGDGDIK-------------------SPVKCLAIDP--- 132 (213)
Q Consensus 79 v~iwd~~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~~~~i~-------------------~~v~~~~~~~--- 132 (213)
|++||+++++ .+..+..|...+.+++|+|+ +..+++++.|+.++ ..|.+++|+|
T Consensus 81 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 160 (379)
T 3jrp_A 81 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 160 (379)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-
T ss_pred EEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccc
Confidence 9999999986 67777889999999999999 99999999999886 5789999999
Q ss_pred ----------CCceEEEecCCCcEEEEEccCCe----eeeeecCCCCceeEEEecCCCeEEEEeCCC---C-eEEEEecC
Q psy7433 133 ----------HEEFFVTGAGDGDIKVWSLSGNH----LLYNFPGEHARSSFFKHIGQGVTQLHVDGG---S-RLFSCGAD 194 (213)
Q Consensus 133 ----------~~~~l~~~~~dg~i~v~d~~~~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~-~l~s~~~d 194 (213)
+++++++++.|+.|++||++++. ....+..|. ..|.+++|+|+ + +|++++.|
T Consensus 161 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~----------~~v~~~~~sp~~~~~~~l~s~~~d 230 (379)
T 3jrp_A 161 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS----------DWVRDVAWSPTVLLRSYLASVSQD 230 (379)
T ss_dssp ---------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCS----------SCEEEEEECCCCSSSEEEEEEETT
T ss_pred cccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEeccc----------CcEeEEEECCCCCCCCeEEEEeCC
Confidence 68999999999999999998653 445566655 78999999997 4 58999999
Q ss_pred CcEEEEeCCCCc
Q psy7433 195 GSMKVRQLPDRD 206 (213)
Q Consensus 195 ~~i~iw~~~~~~ 206 (213)
|.|++||+.++.
T Consensus 231 g~i~iwd~~~~~ 242 (379)
T 3jrp_A 231 RTCIIWTQDNEQ 242 (379)
T ss_dssp SCEEEEEESSTT
T ss_pred CEEEEEeCCCCC
Confidence 999999998763
No 34
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5.7e-34 Score=216.04 Aligned_cols=191 Identities=20% Similarity=0.300 Sum_probs=159.0
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeec------------------CCceEEEEecC
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHD------------------QGASSLVFAPQ 66 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~------------------~~v~~~~~~~~ 66 (213)
+|.+.|.+++|+|+|++||++ .++.+++|++. .+..+..+..+. ..|.+++|+|+
T Consensus 62 ~h~~~V~~v~fspdg~~la~g----~~~~v~i~~~~---~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~d 134 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATG----CNKTTQVYRVS---DGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPD 134 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEE----CBSCEEEEETT---TCCEEEEECC-----------------CCCCBEEEEEECTT
T ss_pred CCCCEEEEEEECCCCCEEEEE----cCCcEEEEEec---CCCEEEEecCccccccccccccccccCCCceeEEEEEECCC
Confidence 699999999999999999998 47899999984 444554444332 24899999999
Q ss_pred CCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------eceEEEEE
Q psy7433 67 HQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------SPVKCLAI 130 (213)
Q Consensus 67 ~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------~~v~~~~~ 130 (213)
+++|++|+.|+.|++||+++++.+..+.+|...|.+++|+|+++.|++++.|+.++ ..+.+++|
T Consensus 135 g~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~ 214 (393)
T 1erj_A 135 GKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAV 214 (393)
T ss_dssp SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEE
Confidence 99999999999999999999999999999999999999999999999999999887 56889999
Q ss_pred cc-CCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCC
Q psy7433 131 DP-HEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 131 ~~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~ 205 (213)
+| +++++++|+.|+.|++||+++++.+..+..... ....|...|.+++|+|++ +|++++.|+.|++||+.+.
T Consensus 215 ~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~---~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~ 288 (393)
T 1erj_A 215 SPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENE---SGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNA 288 (393)
T ss_dssp CSTTCCEEEEEETTSCEEEEETTTCCEEEEEC---------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---
T ss_pred ECCCCCEEEEEcCCCcEEEEECCCCcEEEeeccccc---CCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 99 899999999999999999999887776632110 011223789999999965 6999999999999999764
No 35
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.4e-34 Score=230.54 Aligned_cols=197 Identities=15% Similarity=0.248 Sum_probs=164.2
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC----C
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK----G 77 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~ 77 (213)
+|.+|...|++++|+|+|++||++ +.|++|+|||+... .......+..|...|.+++|+|++++|++++.+ +
T Consensus 54 ~~~~h~~~v~~~~~spdg~~lasg---~~d~~v~lWd~~~~-~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~ 129 (611)
T 1nr0_A 54 IYTEHSHQTTVAKTSPSGYYCASG---DVHGNVRIWDTTQT-THILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFG 129 (611)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEE---ETTSEEEEEESSST-TCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSE
T ss_pred EecCCCCceEEEEECCCCcEEEEE---eCCCCEEEeECCCC-cceeeEeecccCCceEEEEECCCCCEEEEEECCCCcee
Confidence 578999999999999999999999 68999999998421 233455678899999999999999999988765 4
Q ss_pred cEEEEeccCceEEEecccCCCCeeEEEecCCCC-EEEEecCCCcee-----------------eceEEEEEccCCceEEE
Q psy7433 78 DICVIDLRQRVIRSRFNAHESPVKCLAIDPHEE-FFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVT 139 (213)
Q Consensus 78 ~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~ 139 (213)
.|++|| +++....+.+|...|.+++|+|++. .|++++.|+.++ ..|.+++|+|++++|++
T Consensus 130 ~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las 207 (611)
T 1nr0_A 130 HVFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFAS 207 (611)
T ss_dssp EEEETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EEEEee--CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEE
Confidence 677777 4556677889999999999999987 699999999886 57999999999999999
Q ss_pred ecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 140 GAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 140 ~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
++.|+.|++||+++++.+..+..... ....|...|.+++|+|++ +|++++.|+.|++||+.+++.
T Consensus 208 ~s~D~~i~lwd~~~g~~~~~~~~~~~---~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~ 273 (611)
T 1nr0_A 208 TGGDGTIVLYNGVDGTKTGVFEDDSL---KNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKV 273 (611)
T ss_dssp EETTSCEEEEETTTCCEEEECBCTTS---SSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred EECCCcEEEEECCCCcEeeeeccccc---cccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCce
Confidence 99999999999999888877742000 000123789999999975 699999999999999987654
No 36
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-33 Score=211.84 Aligned_cols=190 Identities=12% Similarity=0.214 Sum_probs=172.9
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
+|.+|.+.|++++|+|++++|+++ +.|+.|++||+ ...+.+..+..|...|.+++|+|++++|++++.||.|++
T Consensus 27 ~l~~h~~~v~~~~~s~~~~~l~~~---~~dg~i~vwd~---~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~i 100 (369)
T 3zwl_B 27 KLTGHERPLTQVKYNKEGDLLFSC---SKDSSASVWYS---LNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKL 100 (369)
T ss_dssp EEECCSSCEEEEEECTTSCEEEEE---ESSSCEEEEET---TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEE
T ss_pred EEEEeeceEEEEEEcCCCCEEEEE---eCCCEEEEEeC---CCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 578999999999999999999999 68999999998 567788888899999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCC-----Ccee------------------------------eceE
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD-----GDIK------------------------------SPVK 126 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~-----~~i~------------------------------~~v~ 126 (213)
||+++++.+..+. +...+.+++|+|+++.+++++.+ +.+. ..+.
T Consensus 101 wd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (369)
T 3zwl_B 101 WDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAAT 179 (369)
T ss_dssp EETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEE
T ss_pred EECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCcccee
Confidence 9999999888887 88899999999999999999988 7665 1899
Q ss_pred EEEEccCCceEEEecCCCcEEEEEccC-CeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCC
Q psy7433 127 CLAIDPHEEFFVTGAGDGDIKVWSLSG-NHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 127 ~~~~~~~~~~l~~~~~dg~i~v~d~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~ 204 (213)
+++|+|+++++++++.||.|++||+++ .+.+..+..|. ..|.+++|+|++ +|++++.|+.|++||+.+
T Consensus 180 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~----------~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~ 249 (369)
T 3zwl_B 180 VAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHE----------KSISDMQFSPDLTYFITSSRDTNSFLVDVST 249 (369)
T ss_dssp EEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCS----------SCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCC----------CceeEEEECCCCCEEEEecCCceEEEEECCC
Confidence 999999999999999999999999998 78888888775 789999999965 589999999999999988
Q ss_pred Cccc
Q psy7433 205 RDAV 208 (213)
Q Consensus 205 ~~~~ 208 (213)
.+..
T Consensus 250 ~~~~ 253 (369)
T 3zwl_B 250 LQVL 253 (369)
T ss_dssp CCEE
T ss_pred Ccee
Confidence 7543
No 37
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5.6e-34 Score=216.09 Aligned_cols=187 Identities=16% Similarity=0.289 Sum_probs=164.9
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec-CCCEEEEEcCCCcEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP-QHQLLISAGKKGDIC 80 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~ 80 (213)
++++|...|.+++|+|++++|+++ +.|++|++||++ +.+....+. +...+.+++|+| ++++|++++.|+.|+
T Consensus 160 ~~~~h~~~v~~~~~~p~~~~l~s~---s~d~~v~iwd~~---~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~ 232 (393)
T 1erj_A 160 ILQGHEQDIYSLDYFPSGDKLVSG---SGDRTVRIWDLR---TGQCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVR 232 (393)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEE---ETTSEEEEEETT---TTEEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEE
T ss_pred EEccCCCCEEEEEEcCCCCEEEEe---cCCCcEEEEECC---CCeeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEE
Confidence 467899999999999999999999 689999999994 455555544 567799999999 899999999999999
Q ss_pred EEeccCceEEEec-------ccCCCCeeEEEecCCCCEEEEecCCCcee-----------------------------ec
Q psy7433 81 VIDLRQRVIRSRF-------NAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------------------SP 124 (213)
Q Consensus 81 iwd~~~~~~~~~~-------~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------------------~~ 124 (213)
+||+++++.+..+ .+|...|.+++|+|++++|++++.|+.++ ..
T Consensus 233 iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 312 (393)
T 1erj_A 233 VWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDF 312 (393)
T ss_dssp EEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSC
T ss_pred EEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCc
Confidence 9999998877666 46888999999999999999999999876 24
Q ss_pred eEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC------C-CeEEEEecCCcE
Q psy7433 125 VKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG------G-SRLFSCGADGSM 197 (213)
Q Consensus 125 v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------~-~~l~s~~~d~~i 197 (213)
|.+++|+|++++|++|+.|+.|++||+++++++..+.+|. ..|.+++|++ + +.|++++.||.|
T Consensus 313 v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~----------~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i 382 (393)
T 1erj_A 313 VLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHR----------NSVISVAVANGSSLGPEYNVFATGSGDCKA 382 (393)
T ss_dssp EEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCS----------SCEEEEEECSSCTTCTTCEEEEEEETTSEE
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCC----------CCEEEEEecCCcCcCCCCCEEEEECCCCcE
Confidence 7889999999999999999999999999999999998886 7899999986 2 369999999999
Q ss_pred EEEeCCCC
Q psy7433 198 KVRQLPDR 205 (213)
Q Consensus 198 ~iw~~~~~ 205 (213)
++|++...
T Consensus 383 ~iW~~~~~ 390 (393)
T 1erj_A 383 RIWKYKKI 390 (393)
T ss_dssp EEEEEEEC
T ss_pred EECccccc
Confidence 99998653
No 38
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=5.3e-34 Score=225.43 Aligned_cols=181 Identities=22% Similarity=0.385 Sum_probs=165.5
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
++.+|...|++++|+|++++|+++ +.|+.|++||. ..+.+..+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 380 ~~~~~~~~v~~~~~s~dg~~l~~~---~~d~~v~~~~~----~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~ 452 (577)
T 2ymu_A 380 TLTGHSSSVRGVAFSPDGQTIASA---SDDKTVKLWNR----NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKL 452 (577)
T ss_dssp EEECCSSCEEEEEECTTSSCEEEE---ETTSEEEEECT----TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EecCCCCCeEEEEECCCCCEEEEE---eCCCEEEEEeC----CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEE
Confidence 467899999999999999999999 68999999995 45677888899999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------eceEEEEEccCCceEEEecCCCc
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------SPVKCLAIDPHEEFFVTGAGDGD 145 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------~~v~~~~~~~~~~~l~~~~~dg~ 145 (213)
||. +++.+..+.+|...+.+++|+|++++|++++.|+.++ ..|++++|+|++++|++++.||.
T Consensus 453 w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~ 531 (577)
T 2ymu_A 453 WNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKT 531 (577)
T ss_dssp EET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSE
T ss_pred EEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCE
Confidence 996 5677788888999999999999999999999999886 67999999999999999999999
Q ss_pred EEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEe
Q psy7433 146 IKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQ 201 (213)
Q Consensus 146 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~ 201 (213)
|++||. +++.+..+.+|. ..|++++|+|++ +|+|++.|+.|++||
T Consensus 532 v~lwd~-~~~~~~~~~~h~----------~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 532 VKLWNR-NGQLLQTLTGHS----------SSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEEECT-TSCEEEEEECCS----------SCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEeC-CCCEEEEEcCCC----------CCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 999995 678888888876 789999999975 599999999999997
No 39
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=3.5e-34 Score=219.88 Aligned_cols=195 Identities=17% Similarity=0.250 Sum_probs=157.4
Q ss_pred cccccCceEEEEEeC-CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec-CCCEEEEEcCCCcEE
Q psy7433 3 YQCHNKITSDFVFLG-SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP-QHQLLISAGKKGDIC 80 (213)
Q Consensus 3 l~~h~~~v~~~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~ 80 (213)
..+|...|++++|+| ++++||+| +.||.|+|||+... .......+.+|...|++++|+| ++++|++++.||+|+
T Consensus 115 ~~~~~~~V~~l~~~P~~~~~lasG---s~dg~i~lWd~~~~-~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~ 190 (435)
T 4e54_B 115 AAPFDRRATSLAWHPTHPSTVAVG---SKGGDIMLWNFGIK-DKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTR 190 (435)
T ss_dssp EEECSSCEEEEEECSSCTTCEEEE---ETTSCEEEECSSCC-SCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEE
T ss_pred CCCCCCCEEEEEEeCCCCCEEEEE---eCCCEEEEEECCCC-CceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEE
Confidence 457889999999999 56789998 69999999998532 2234445668999999999998 689999999999999
Q ss_pred EEeccCceEEEecc--cCCCCeeEEEecCCCCEEEEecCCCcee----------------eceEEEEEccCCc-eEEEec
Q psy7433 81 VIDLRQRVIRSRFN--AHESPVKCLAIDPHEEFFVTGAGDGDIK----------------SPVKCLAIDPHEE-FFVTGA 141 (213)
Q Consensus 81 iwd~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------~~v~~~~~~~~~~-~l~~~~ 141 (213)
+||++++....... .+...+.+++|+|++.+|++++.|+.++ ..|.+++|+|+++ ++++++
T Consensus 191 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s 270 (435)
T 4e54_B 191 LQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATAS 270 (435)
T ss_dssp EEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEE
T ss_pred EeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEec
Confidence 99998765433332 2345678999999999999999999886 6799999999987 788999
Q ss_pred CCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCccc
Q psy7433 142 GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 142 ~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
.|+.|++||+++.+....+... ..|...|++++|+|++ +|++++.||.|++||+.+....
T Consensus 271 ~d~~v~iwd~~~~~~~~~~~~~-------~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~ 331 (435)
T 4e54_B 271 VDQTVKIWDLRQVRGKASFLYS-------LPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCP 331 (435)
T ss_dssp TTSBCCEEETTTCCSSSCCSBC-------CBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSE
T ss_pred CcceeeEEecccccccceEEEe-------eeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccc
Confidence 9999999999876654433211 0123789999999965 6999999999999999886543
No 40
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.6e-33 Score=222.48 Aligned_cols=188 Identities=19% Similarity=0.285 Sum_probs=168.3
Q ss_pred ccccccCceEEEEEeCCCC-eEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEE
Q psy7433 2 TYQCHNKITSDFVFLGSCS-LVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDIC 80 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~-~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 80 (213)
++.+|.+.|++++|+|++. .|+++ +.|++|++||. ...+....+.+|...|.+++|+|++++|++++.|+.|+
T Consensus 142 ~l~gh~~~v~~v~f~p~~~~~l~s~---s~D~~v~lwd~---~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~ 215 (611)
T 1nr0_A 142 NLTGQARAMNSVDFKPSRPFRIISG---SDDNTVAIFEG---PPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIV 215 (611)
T ss_dssp CCCCCSSCEEEEEECSSSSCEEEEE---ETTSCEEEEET---TTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eecCCCCCceEEEECCCCCeEEEEE---eCCCeEEEEEC---CCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEE
Confidence 4789999999999999987 58888 68999999998 55677788899999999999999999999999999999
Q ss_pred EEeccCceEEEecc-------cCCCCeeEEEecCCCCEEEEecCCCcee-------------------------------
Q psy7433 81 VIDLRQRVIRSRFN-------AHESPVKCLAIDPHEEFFVTGAGDGDIK------------------------------- 122 (213)
Q Consensus 81 iwd~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------------------- 122 (213)
+||+.+++....+. +|...|.+++|+|++++|++++.|+.++
T Consensus 216 lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (611)
T 1nr0_A 216 LYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQ 295 (611)
T ss_dssp EEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSS
T ss_pred EEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCC
Confidence 99999998887774 6899999999999999999999999776
Q ss_pred -----------------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeec-CCCCceeEEEe
Q psy7433 123 -----------------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFP-GEHARSSFFKH 172 (213)
Q Consensus 123 -----------------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~-~~~~~~~~~~~ 172 (213)
..|.+++|+|++++|++++.|+.|++||+++++....+. .|.
T Consensus 296 ~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~-------- 367 (611)
T 1nr0_A 296 ALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHA-------- 367 (611)
T ss_dssp CEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCS--------
T ss_pred EEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCc--------
Confidence 136789999999999999999999999999888766553 333
Q ss_pred cCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCC
Q psy7433 173 IGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 173 ~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 205 (213)
..|.+++|++++.+++++.|+.+++|++...
T Consensus 368 --~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~ 398 (611)
T 1nr0_A 368 --TMITGIKTTSKGDLFTVSWDDHLKVVPAGGS 398 (611)
T ss_dssp --SCEEEEEECTTSCEEEEETTTEEEEECSSSS
T ss_pred --ceEEEEEECCCCcEEEEEcCCceEEeecCCc
Confidence 6899999999889999999999999998764
No 41
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.2e-34 Score=218.17 Aligned_cols=188 Identities=17% Similarity=0.232 Sum_probs=158.5
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccc--cceeeeeeecCCceEEEEecCCCEEEEEcCCCcEE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKK--ALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDIC 80 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 80 (213)
++.|.++|++++|+|++++|+++ +.|+.|++||+. .. +.+..+.+|...|.+++|+|++++|++++.|+.|+
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~---~~d~~i~iw~~~---~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~ 80 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTT---TATNQVELYEQD---GNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAY 80 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECC---CSSSCBCEEEEE---TTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEE
T ss_pred EecCCCcEEEEEECCCCCEEEEe---cCCCEEEEEEcc---CCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEE
Confidence 34567899999999999999999 789999999983 33 67777888999999999999999999999999999
Q ss_pred EEeccCce---EEEecccCCCCeeEEEecCCCCEEEEecCCCcee---------------------eceEEEEEccCCce
Q psy7433 81 VIDLRQRV---IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------------SPVKCLAIDPHEEF 136 (213)
Q Consensus 81 iwd~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------------~~v~~~~~~~~~~~ 136 (213)
+||+++++ ....+..|...|.+++|+|+++.|++++.|+.++ ..|.+++|+|++++
T Consensus 81 vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 160 (377)
T 3dwl_C 81 VYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVL 160 (377)
T ss_dssp EC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSE
T ss_pred EEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCE
Confidence 99999876 6677778999999999999999999999999875 46899999999999
Q ss_pred EEEecCCCcEEEEEccC------------------CeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcE
Q psy7433 137 FVTGAGDGDIKVWSLSG------------------NHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSM 197 (213)
Q Consensus 137 l~~~~~dg~i~v~d~~~------------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i 197 (213)
|++++.|+.|++||++. ++++..+ .| ...|.+++|+|++ +|++++.|+.|
T Consensus 161 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----------~~~v~~~~~sp~~~~l~~~~~d~~i 229 (377)
T 3dwl_C 161 LAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PS----------GGWVHAVGFSPSGNALAYAGHDSSV 229 (377)
T ss_dssp EEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CC----------SSSEEEEEECTTSSCEEEEETTTEE
T ss_pred EEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cC----------CceEEEEEECCCCCEEEEEeCCCcE
Confidence 99999999999999953 3344444 33 3789999999965 59999999999
Q ss_pred EEEeCCCCcc
Q psy7433 198 KVRQLPDRDA 207 (213)
Q Consensus 198 ~iw~~~~~~~ 207 (213)
++||+.+++.
T Consensus 230 ~iwd~~~~~~ 239 (377)
T 3dwl_C 230 TIAYPSAPEQ 239 (377)
T ss_dssp C-CEECSTTS
T ss_pred EEEECCCCCC
Confidence 9999998765
No 42
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=9.4e-34 Score=216.02 Aligned_cols=189 Identities=17% Similarity=0.311 Sum_probs=164.5
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
.+.+|.+.|.+++|+|++++|+++ +.|+.|++||+ ...+.+..+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 134 ~~~~h~~~v~~~~~~~~~~~l~s~---s~d~~i~iwd~---~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~i 207 (420)
T 3vl1_A 134 IDQAHVSEITKLKFFPSGEALISS---SQDMQLKIWSV---KDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRL 207 (420)
T ss_dssp ETTSSSSCEEEEEECTTSSEEEEE---ETTSEEEEEET---TTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred ecccccCccEEEEECCCCCEEEEE---eCCCeEEEEeC---CCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEE
Confidence 357899999999999999999999 68999999999 566677888899999999999999999999999999999
Q ss_pred EeccCceEEEecccC------------------------CCCeeEEEecCCCCEEEEecCCCcee---------------
Q psy7433 82 IDLRQRVIRSRFNAH------------------------ESPVKCLAIDPHEEFFVTGAGDGDIK--------------- 122 (213)
Q Consensus 82 wd~~~~~~~~~~~~~------------------------~~~i~~~~~~~~~~~l~~~~~~~~i~--------------- 122 (213)
||+++++.+..+..+ ...+.+++|+|+++++++++.|+.++
T Consensus 208 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 287 (420)
T 3vl1_A 208 WECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPS 287 (420)
T ss_dssp EETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred eECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEccc
Confidence 999999888877642 24556667789999999999999886
Q ss_pred ---eceEEEEEccCCc-eEEEecCCCcEEEEEccCCee-eeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcE
Q psy7433 123 ---SPVKCLAIDPHEE-FFVTGAGDGDIKVWSLSGNHL-LYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSM 197 (213)
Q Consensus 123 ---~~v~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i 197 (213)
..+.+++|+|+++ +|++|+.||.|++||+++++. +..+..++ ...|.++.+.++..|++++.|+.|
T Consensus 288 ~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~---------~~~v~~~~~~~~~~l~s~~~d~~v 358 (420)
T 3vl1_A 288 KFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINE---------GTPINNVYFAAGALFVSSGFDTSI 358 (420)
T ss_dssp TTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEEST---------TSCEEEEEEETTEEEEEETTTEEE
T ss_pred ccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccC---------CCCceEEEeCCCCEEEEecCCccE
Confidence 5799999999999 999999999999999987643 55665543 368999988777789999999999
Q ss_pred EEEeCCCC
Q psy7433 198 KVRQLPDR 205 (213)
Q Consensus 198 ~iw~~~~~ 205 (213)
++|++...
T Consensus 359 ~iw~~~~~ 366 (420)
T 3vl1_A 359 KLDIISDP 366 (420)
T ss_dssp EEEEECCT
T ss_pred EEEeccCC
Confidence 99999874
No 43
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1e-32 Score=206.92 Aligned_cols=190 Identities=16% Similarity=0.249 Sum_probs=166.2
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccccc--ceeeeeeecCCceEEEEecCCCEEEEEcCCCcE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKA--LVQAFVCHDQGASSLVFAPQHQLLISAGKKGDI 79 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v 79 (213)
.+..|.++|++++|+|++++|+++ +.|+.|++||+ ...+ .+..+.+|...|.+++|+|++++|++++.|+.|
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~---~~d~~v~i~~~---~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i 76 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAIC---PNNHEVHIYEK---SGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNA 76 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEE---CSSSEEEEEEE---ETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred eecccCCCeEEEEECCCCCEEEEE---eCCCEEEEEeC---CCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeE
Confidence 356799999999999999999999 68999999998 3443 778888999999999999999999999999999
Q ss_pred EEEeccCceEEEe--cccCCCCeeEEEecCCCCEEEEecCCCcee---------------------eceEEEEEccCCce
Q psy7433 80 CVIDLRQRVIRSR--FNAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------------SPVKCLAIDPHEEF 136 (213)
Q Consensus 80 ~iwd~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------------~~v~~~~~~~~~~~ 136 (213)
++||+++++.... +..+...+.+++|+|++++|++++.++.++ ..|.+++|+|++++
T Consensus 77 ~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 156 (372)
T 1k8k_C 77 YVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVL 156 (372)
T ss_dssp EEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSE
T ss_pred EEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCE
Confidence 9999998865443 456888999999999999999999999875 56899999999999
Q ss_pred EEEecCCCcEEEEEcc------------------CCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcE
Q psy7433 137 FVTGAGDGDIKVWSLS------------------GNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSM 197 (213)
Q Consensus 137 l~~~~~dg~i~v~d~~------------------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i 197 (213)
|++++.||.|++||++ .++.+..+..|. ..|.+++|+|++ .|++++.|+.|
T Consensus 157 l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~v~~~~~~~~~~~l~~~~~d~~i 226 (372)
T 1k8k_C 157 LAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSC----------GWVHGVCFSANGSRVAWVSHDSTV 226 (372)
T ss_dssp EEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCS----------SCEEEEEECSSSSEEEEEETTTEE
T ss_pred EEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCC----------CeEEEEEECCCCCEEEEEeCCCEE
Confidence 9999999999999964 556666666654 789999999965 69999999999
Q ss_pred EEEeCCCCcc
Q psy7433 198 KVRQLPDRDA 207 (213)
Q Consensus 198 ~iw~~~~~~~ 207 (213)
++||+.+++.
T Consensus 227 ~i~d~~~~~~ 236 (372)
T 1k8k_C 227 CLADADKKMA 236 (372)
T ss_dssp EEEEGGGTTE
T ss_pred EEEECCCCce
Confidence 9999987654
No 44
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1e-32 Score=202.39 Aligned_cols=189 Identities=20% Similarity=0.284 Sum_probs=159.5
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec-CCCEEEEEcCCCcEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP-QHQLLISAGKKGDIC 80 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~ 80 (213)
++++|.+.|++++|+|++++|+++ +.|++|++||++ ........+.+|...|.+++|+| ++.+|++|+.|+.|+
T Consensus 92 ~~~~h~~~v~~~~~~~~~~~l~sg---s~D~~v~lWd~~--~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~ 166 (304)
T 2ynn_A 92 DFEAHPDYIRSIAVHPTKPYVLSG---SDDLTVKLWNWE--NNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVK 166 (304)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEE---ETTSCEEEEEGG--GTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEE
T ss_pred EEeCCCCcEEEEEEcCCCCEEEEE---CCCCeEEEEECC--CCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEE
Confidence 477899999999999999999999 799999999984 22245567888999999999999 678999999999999
Q ss_pred EEeccCceEEEecc-cCCCCeeEEEecC--CCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEe
Q psy7433 81 VIDLRQRVIRSRFN-AHESPVKCLAIDP--HEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTG 140 (213)
Q Consensus 81 iwd~~~~~~~~~~~-~~~~~i~~~~~~~--~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~ 140 (213)
+||++++.....+. .+...+..+.++| ++.+|++++.|+.++ ..|.+++|+|++++|++|
T Consensus 167 iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~ 246 (304)
T 2ynn_A 167 VWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISG 246 (304)
T ss_dssp EEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEE
T ss_pred EEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEE
Confidence 99998876555443 4557889999987 678999999999887 678999999999999999
Q ss_pred cCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC--eEEEEecCCcEEEEeCCCC
Q psy7433 141 AGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS--RLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 141 ~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~d~~i~iw~~~~~ 205 (213)
+.||.|++||+++++.+..+..+. ..+.+++++|++ .+++++.++.+.+|++.++
T Consensus 247 s~Dg~i~iWd~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~asg~~~g~~~~~~~~~ 303 (304)
T 2ynn_A 247 SEDGTLKIWNSSTYKVEKTLNVGL----------ERSWCIATHPTGRKNYIASGFDNGFTVLSLGND 303 (304)
T ss_dssp ETTSCEEEEETTTCCEEEEECCSS----------SSEEEEEECTTCGGGCEEEEETTEEEEEECC--
T ss_pred cCCCeEEEEECCCCceeeeccCCC----------ccEEEEEECCCCCceEEEEecCCceEEEEeccC
Confidence 999999999999999999998876 689999999854 2344445666888888764
No 45
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.2e-32 Score=201.50 Aligned_cols=189 Identities=17% Similarity=0.230 Sum_probs=156.1
Q ss_pred ccccccCceEEEEEeCC--CCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecC--CCEEEEEcCCC
Q psy7433 2 TYQCHNKITSDFVFLGS--CSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQ--HQLLISAGKKG 77 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~--~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~ 77 (213)
+|++|.++|++++|+|+ +++|+++ +.|++|++||++.. ....+..+..|...|.+++|+|+ +++|++++.|+
T Consensus 48 ~l~gH~~~V~~v~~s~~~~g~~l~s~---s~D~~v~iWd~~~~-~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~ 123 (297)
T 2pm7_B 48 TLTGHEGPVWRVDWAHPKFGTILASC---SYDGKVMIWKEENG-RWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDG 123 (297)
T ss_dssp EECCCSSCEEEEEECCGGGCSEEEEE---ETTTEEEEEEBSSS-CBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred EEccccCCeEEEEecCCCcCCEEEEE---cCCCEEEEEEcCCC-ceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCC
Confidence 57899999999999863 8999999 68999999998532 22355667789999999999997 88999999999
Q ss_pred cEEEEeccCce--EEEecccCCCCeeEEEecCC-------------CCEEEEecCCCcee--------------------
Q psy7433 78 DICVIDLRQRV--IRSRFNAHESPVKCLAIDPH-------------EEFFVTGAGDGDIK-------------------- 122 (213)
Q Consensus 78 ~v~iwd~~~~~--~~~~~~~~~~~i~~~~~~~~-------------~~~l~~~~~~~~i~-------------------- 122 (213)
.|++||++++. ....+.+|...+.+++|+|+ ++.|++++.|+.++
T Consensus 124 ~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H 203 (297)
T 2pm7_B 124 KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH 203 (297)
T ss_dssp EEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC
T ss_pred cEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCC
Confidence 99999998763 23456789999999999997 46899999999876
Q ss_pred -eceEEEEEccCC---ceEEEecCCCcEEEEEccCCe---eeeee--cCCCCceeEEEecCCCeEEEEeCCCC-eEEEEe
Q psy7433 123 -SPVKCLAIDPHE---EFFVTGAGDGDIKVWSLSGNH---LLYNF--PGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCG 192 (213)
Q Consensus 123 -~~v~~~~~~~~~---~~l~~~~~dg~i~v~d~~~~~---~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~ 192 (213)
..|.+++|+|++ ++|++++.|+.|++||++... ....+ ..+ ...|.+++|+|++ +|++++
T Consensus 204 ~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~----------~~~v~~~~~s~~g~~las~~ 273 (297)
T 2pm7_B 204 SDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKF----------PDVLWRASWSLSGNVLALSG 273 (297)
T ss_dssp SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCC----------SSCEEEEEECSSSCCEEEEE
T ss_pred CCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccC----------CCcEEEEEECCCCCEEEEEc
Confidence 458999999985 799999999999999997642 11122 222 2689999999965 699999
Q ss_pred cCCcEEEEeCCC
Q psy7433 193 ADGSMKVRQLPD 204 (213)
Q Consensus 193 ~d~~i~iw~~~~ 204 (213)
.|+.|++|+...
T Consensus 274 ~D~~v~lw~~~~ 285 (297)
T 2pm7_B 274 GDNKVTLWKENL 285 (297)
T ss_dssp TTSCEEEEEECT
T ss_pred CCCcEEEEEECC
Confidence 999999999874
No 46
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.1e-32 Score=222.60 Aligned_cols=189 Identities=19% Similarity=0.339 Sum_probs=167.2
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
++.+|...|.+++|+|++++|+++ +.|+.|++||+ .....+..+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 425 ~~~~h~~~v~~v~~s~~g~~l~sg---s~Dg~v~vwd~---~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~i 498 (694)
T 3dm0_A 425 RLTGHSHFVEDVVLSSDGQFALSG---SWDGELRLWDL---AAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKL 498 (694)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEE---ETTSEEEEEET---TTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEE
T ss_pred eecCCCCcEEEEEECCCCCEEEEE---eCCCcEEEEEC---CCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEE
Confidence 467899999999999999999999 68999999999 566778888999999999999999999999999999999
Q ss_pred EeccCceEEEec---ccCCCCeeEEEecCCC--CEEEEecCCCcee-----------------eceEEEEEccCCceEEE
Q psy7433 82 IDLRQRVIRSRF---NAHESPVKCLAIDPHE--EFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVT 139 (213)
Q Consensus 82 wd~~~~~~~~~~---~~~~~~i~~~~~~~~~--~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~ 139 (213)
||.......... .+|...|.+++|+|++ ..+++++.|+.++ ..|.+++|+|++++|++
T Consensus 499 wd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s 578 (694)
T 3dm0_A 499 WNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCAS 578 (694)
T ss_dssp ECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEE
Confidence 998765443332 4578889999999986 5799999999886 67999999999999999
Q ss_pred ecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCcc
Q psy7433 140 GAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 140 ~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 207 (213)
++.||.|++||+++++.+..+..+ ..|.+++|+|++.+++++.++.|++||+.++..
T Consensus 579 g~~Dg~i~iwd~~~~~~~~~~~~~-----------~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~ 635 (694)
T 3dm0_A 579 GGKDGVVLLWDLAEGKKLYSLEAN-----------SVIHALCFSPNRYWLCAATEHGIKIWDLESKSI 635 (694)
T ss_dssp EETTSBCEEEETTTTEEEECCBCS-----------SCEEEEEECSSSSEEEEEETTEEEEEETTTTEE
T ss_pred EeCCCeEEEEECCCCceEEEecCC-----------CcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCC
Confidence 999999999999999988887654 579999999998877778888899999988753
No 47
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.6e-32 Score=208.59 Aligned_cols=194 Identities=15% Similarity=0.212 Sum_probs=164.3
Q ss_pred ccccccCceEEEEEeC-CCCeEEEeeccCCCccEEEEeCCCccc----ccceeeeeeecCCceEEEEecCC-CEEEEEcC
Q psy7433 2 TYQCHNKITSDFVFLG-SCSLVATAGHSSESKNVCLWDSLLPQK----KALVQAFVCHDQGASSLVFAPQH-QLLISAGK 75 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~ 75 (213)
++.+|.+.|.+++|+| ++++|+++ +.|+.|++||+..... ...+..+.+|...|.+++|+|++ ++|++++.
T Consensus 76 ~~~~h~~~V~~~~~~p~~~~~l~s~---s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~ 152 (402)
T 2aq5_A 76 LVCGHTAPVLDIAWCPHNDNVIASG---SEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGC 152 (402)
T ss_dssp CBCCCSSCEEEEEECTTCTTEEEEE---ETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEET
T ss_pred eEecCCCCEEEEEeCCCCCCEEEEE---eCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcC
Confidence 4678999999999999 99999999 6899999999953211 15677888999999999999998 69999999
Q ss_pred CCcEEEEeccCceEEEec--ccCCCCeeEEEecCCCCEEEEecCCCcee-------------------eceEEEEEccCC
Q psy7433 76 KGDICVIDLRQRVIRSRF--NAHESPVKCLAIDPHEEFFVTGAGDGDIK-------------------SPVKCLAIDPHE 134 (213)
Q Consensus 76 d~~v~iwd~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-------------------~~v~~~~~~~~~ 134 (213)
|+.|++||+++++.+..+ ..|...|.+++|+|+++.|++++.|+.++ ..+.++.|+|++
T Consensus 153 dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (402)
T 2aq5_A 153 DNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEG 232 (402)
T ss_dssp TSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTT
T ss_pred CCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCC
Confidence 999999999999999888 78999999999999999999999999886 237889999999
Q ss_pred ceEEEe---cCCCcEEEEEccCCee-eeeecCCCCceeEEEecCCCeEEEEeCCCC-eEE-EEecCCcEEEEeCCCCcc
Q psy7433 135 EFFVTG---AGDGDIKVWSLSGNHL-LYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLF-SCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 135 ~~l~~~---~~dg~i~v~d~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~-s~~~d~~i~iw~~~~~~~ 207 (213)
+++++| +.|+.|++||+++.+. +....... ...+.+++|+|++ .|+ +++.|+.|++||+.+++.
T Consensus 233 ~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~---------~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~ 302 (402)
T 2aq5_A 233 KILTTGFSRMSERQVALWDTKHLEEPLSLQELDT---------SSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP 302 (402)
T ss_dssp EEEEEEECTTCCEEEEEEETTBCSSCSEEEECCC---------CSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTT
T ss_pred cEEEEeccCCCCceEEEEcCccccCCceEEeccC---------CCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc
Confidence 999999 8999999999987654 22222211 2679999999965 454 555799999999998764
No 48
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.6e-32 Score=205.93 Aligned_cols=188 Identities=15% Similarity=0.278 Sum_probs=159.5
Q ss_pred ccccccCceEEEEEeCCC-CeEEEeeccCCCccEEEEeCCCcccccceeeee--eecCCceEEEEec-CCCEEEEEcCCC
Q psy7433 2 TYQCHNKITSDFVFLGSC-SLVATAGHSSESKNVCLWDSLLPQKKALVQAFV--CHDQGASSLVFAP-QHQLLISAGKKG 77 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~-~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~l~~~~~d~ 77 (213)
++.+|.+.|++++|+|++ ++|+++ +.|+.|++||+. .......+. +|...|.+++|+| ++++|++++.|+
T Consensus 68 ~~~~h~~~v~~~~~~~~~~~~l~s~---~~dg~i~iwd~~---~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~ 141 (383)
T 3ei3_B 68 TASPFDRRVTSLEWHPTHPTTVAVG---SKGGDIILWDYD---VQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRG 141 (383)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEE---EBTSCEEEEETT---STTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTT
T ss_pred eccCCCCCEEEEEECCCCCCEEEEE---cCCCeEEEEeCC---CcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCC
Confidence 467899999999999999 899999 689999999994 344444443 6899999999999 789999999999
Q ss_pred cEEEEeccCceEEEeccc---CCCCeeEEEecCCCCEEEEecCCCcee----------------eceEEEEEccCCc-eE
Q psy7433 78 DICVIDLRQRVIRSRFNA---HESPVKCLAIDPHEEFFVTGAGDGDIK----------------SPVKCLAIDPHEE-FF 137 (213)
Q Consensus 78 ~v~iwd~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------~~v~~~~~~~~~~-~l 137 (213)
.|++||+++. .+..+.. +...+.+++|+|+++.|++++.|+.++ ..|.+++|+|+++ ++
T Consensus 142 ~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 220 (383)
T 3ei3_B 142 ATTLRDFSGS-VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLM 220 (383)
T ss_dssp EEEEEETTSC-EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECSSSCEEEEEECSSCTTEE
T ss_pred EEEEEECCCC-ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccCCCcEEEEEECCCCCCEE
Confidence 9999999864 3444433 347899999999999999999999885 6799999999999 99
Q ss_pred EEecCCCcEEEEEccC----CeeeeeecCCCCceeEEEecCCCeEEEEeCC-CC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 138 VTGAGDGDIKVWSLSG----NHLLYNFPGEHARSSFFKHIGQGVTQLHVDG-GS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 138 ~~~~~dg~i~v~d~~~----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
++++.|+.|++||+++ +..+..+ .|. ..|.+++|+| ++ +|++++.|+.|++||+.+...
T Consensus 221 ~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~----------~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 221 ATSSVDATVKLWDLRNIKDKNSYIAEM-PHE----------KPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSK 285 (383)
T ss_dssp EEEETTSEEEEEEGGGCCSTTCEEEEE-ECS----------SCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTS
T ss_pred EEEeCCCEEEEEeCCCCCcccceEEEe-cCC----------CceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 9999999999999987 4555555 333 7899999999 65 689999999999999987654
No 49
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.5e-33 Score=210.15 Aligned_cols=190 Identities=14% Similarity=0.170 Sum_probs=154.5
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
++++|.+.|.+++|+|++++|+++ +.|+.|++||++..........+..|...|.+++|+|++++|++++.|+.|++
T Consensus 50 ~~~~h~~~v~~~~~s~~~~~l~s~---s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 126 (377)
T 3dwl_C 50 TFSDHDKIVTCVDWAPKSNRIVTC---SQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISV 126 (377)
T ss_dssp CBCCCSSCEEEEEECTTTCCEEEE---ETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEE
T ss_pred EEecCCceEEEEEEeCCCCEEEEE---eCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEE
Confidence 578999999999999999999999 68999999999543323356667789999999999999999999999999999
Q ss_pred EeccCce---EEEeccc-CCCCeeEEEecCCCCEEEEecCCCcee----------------------------------e
Q psy7433 82 IDLRQRV---IRSRFNA-HESPVKCLAIDPHEEFFVTGAGDGDIK----------------------------------S 123 (213)
Q Consensus 82 wd~~~~~---~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------------------------~ 123 (213)
||+++++ ....+.. |...|.+++|+|++++|++++.|+.++ .
T Consensus 127 wd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (377)
T 3dwl_C 127 CYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGG 206 (377)
T ss_dssp CCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSS
T ss_pred EEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCc
Confidence 9999876 3666776 899999999999999999999999875 1
Q ss_pred ceEEEEEccCCceEEEecCCCcEEEEEccCCee----eeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEE
Q psy7433 124 PVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHL----LYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKV 199 (213)
Q Consensus 124 ~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~i 199 (213)
.|.+++|+|++++|++++.||.|++||+++++. +..+..|. ..|.+++|+|++.+++++.++.+.+
T Consensus 207 ~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~----------~~v~~~~~s~~~~~l~~~~~~~~~~ 276 (377)
T 3dwl_C 207 WVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQ----------LPLRSLLWANESAIVAAGYNYSPIL 276 (377)
T ss_dssp SEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSS----------SCEEEEEEEETTEEEEEESSSSEEE
T ss_pred eEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCC----------CceEEEEEcCCCCEEEEEcCCcEEE
Confidence 288999999999999999999999999998876 67777765 7899999999876444445555667
Q ss_pred EeCCC
Q psy7433 200 RQLPD 204 (213)
Q Consensus 200 w~~~~ 204 (213)
|+...
T Consensus 277 ~~~~~ 281 (377)
T 3dwl_C 277 LQGNE 281 (377)
T ss_dssp ECCCC
T ss_pred EEeCC
Confidence 77763
No 50
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.2e-33 Score=216.63 Aligned_cols=189 Identities=14% Similarity=0.122 Sum_probs=159.7
Q ss_pred cccccCceEEEEEeCC------CCeEEEeeccCCCccEEEEeCCCcccc--------cceeeeeeecCCceEEEEecCCC
Q psy7433 3 YQCHNKITSDFVFLGS------CSLVATAGHSSESKNVCLWDSLLPQKK--------ALVQAFVCHDQGASSLVFAPQHQ 68 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~------~~~l~~~g~~s~~~~i~iwd~~~~~~~--------~~~~~~~~~~~~v~~~~~~~~~~ 68 (213)
+.+|.+.|++++|+|+ +.+||++ +.|++|++||+...... .....+.+|...|++++|++++
T Consensus 203 l~~~~~~V~~v~wsp~~~~~~~~~~LAs~---s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~- 278 (524)
T 2j04_B 203 IVHSFGEVWDLKWHEGCHAPHLVGCLSFV---SQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT- 278 (524)
T ss_dssp EEECCCSEEEEEECSSCCCSSSSCEEEEE---ETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-
T ss_pred EEecCCcEEEEEECCCCCCCCCCceEEEE---ecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-
Confidence 5577889999999996 5799999 68999999999543211 1234677889999999999864
Q ss_pred EEEEEcCCCcEEEEeccCc-eEEEecccCCCCeeEE--EecCCC-CEEEEecCCCcee-------------------ece
Q psy7433 69 LLISAGKKGDICVIDLRQR-VIRSRFNAHESPVKCL--AIDPHE-EFFVTGAGDGDIK-------------------SPV 125 (213)
Q Consensus 69 ~l~~~~~d~~v~iwd~~~~-~~~~~~~~~~~~i~~~--~~~~~~-~~l~~~~~~~~i~-------------------~~v 125 (213)
.|++|+.||+|++||++++ .+...+..|...|.++ +|+|++ .+|++++.|++++ ..+
T Consensus 279 ~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v 358 (524)
T 2j04_B 279 TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNL 358 (524)
T ss_dssp EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSC
T ss_pred eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcc
Confidence 8999999999999999976 3445678899999999 578887 8999999999987 136
Q ss_pred EEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCC
Q psy7433 126 KCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 126 ~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~ 204 (213)
.+++|+|+++.+++++.|+.|++||++++.++..+.+|. ..|++++|+|++ .|++|+.|+.|++||+..
T Consensus 359 ~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~----------~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 359 VPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRE----------TTITAIGVSRLHPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp CCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECS----------SCEEEEECCSSCCBCEEEETTTEEECCBSCS
T ss_pred cceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCC----------CceEEEEeCCCCCeEEEEECCCEEEEEechH
Confidence 789999999999999999999999999988777777765 789999999965 599999999999999865
Q ss_pred C
Q psy7433 205 R 205 (213)
Q Consensus 205 ~ 205 (213)
.
T Consensus 429 ~ 429 (524)
T 2j04_B 429 R 429 (524)
T ss_dssp S
T ss_pred h
Confidence 3
No 51
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-32 Score=222.93 Aligned_cols=192 Identities=18% Similarity=0.270 Sum_probs=166.9
Q ss_pred CccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecC--CCEEEEEcCCCc
Q psy7433 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQ--HQLLISAGKKGD 78 (213)
Q Consensus 1 ~~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~ 78 (213)
.++++|.++|++++|+|++++|+++ +.||.|++||+.. .+...+..+.+|...|.+++|+|+ +++|++|+.||.
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg---~~dg~I~vwd~~~-~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~ 78 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATC---SSDKTIKIFEVEG-ETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 78 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEE---ETTTEEEEEEEET-TEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSC
T ss_pred eecccCcceeEEEEECCCCCeEEEE---ECCCcEEEEecCC-CCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCe
Confidence 3688999999999999999999999 6899999999842 255677788899999999999987 999999999999
Q ss_pred EEEEeccCce--EEEecccCCCCeeEEEecCC--CCEEEEecCCCcee-------------------eceEEEEEcc---
Q psy7433 79 ICVIDLRQRV--IRSRFNAHESPVKCLAIDPH--EEFFVTGAGDGDIK-------------------SPVKCLAIDP--- 132 (213)
Q Consensus 79 v~iwd~~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~~~~i~-------------------~~v~~~~~~~--- 132 (213)
|++||+++++ ....+..|...|.+++|+|+ ++.+++++.|+.++ ..|.+++|+|
T Consensus 79 I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~ 158 (753)
T 3jro_A 79 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 158 (753)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-
T ss_pred EEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccc
Confidence 9999999986 67777889999999999999 99999999999886 6789999999
Q ss_pred ----------CCceEEEecCCCcEEEEEccCC----eeeeeecCCCCceeEEEecCCCeEEEEeCCC---C-eEEEEecC
Q psy7433 133 ----------HEEFFVTGAGDGDIKVWSLSGN----HLLYNFPGEHARSSFFKHIGQGVTQLHVDGG---S-RLFSCGAD 194 (213)
Q Consensus 133 ----------~~~~l~~~~~dg~i~v~d~~~~----~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~-~l~s~~~d 194 (213)
+++++++|+.||.|++||++++ .....+..|. ..|.+++|+|+ + .|++++.|
T Consensus 159 ~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~----------~~V~~l~~sp~~~~~~~l~s~s~D 228 (753)
T 3jro_A 159 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS----------DWVRDVAWSPTVLLRSYLASVSQD 228 (753)
T ss_dssp --------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCS----------SCEEEEEECCCCSSSEEEEEEESS
T ss_pred ccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCC----------CcEEEEEeccCCCCCCEEEEEecC
Confidence 5889999999999999999876 5556666665 78999999997 5 58999999
Q ss_pred CcEEEEeCCCCc
Q psy7433 195 GSMKVRQLPDRD 206 (213)
Q Consensus 195 ~~i~iw~~~~~~ 206 (213)
|.|++||+.++.
T Consensus 229 g~I~iwd~~~~~ 240 (753)
T 3jro_A 229 RTCIIWTQDNEQ 240 (753)
T ss_dssp SCEEEEEESSSS
T ss_pred CEEEEecCCCCC
Confidence 999999998863
No 52
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=5.3e-32 Score=206.38 Aligned_cols=187 Identities=17% Similarity=0.198 Sum_probs=161.9
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCc
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR 87 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~ 87 (213)
..+....|+|++++|+++ +.|+.|++||+ ........+..|...|.+++|+|++++|++++.|+.|++||++++
T Consensus 98 ~~~~~~~~~~~~~~l~~~---~~dg~i~iwd~---~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~ 171 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILG---TTEGDIKVLDS---NFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDG 171 (420)
T ss_dssp CEEEEEEECSSSCEEEEE---ETTSCEEEECT---TSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred CceEEEEEecCCCEEEEE---ECCCCEEEEeC---CCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCC
Confidence 445555789999999999 68999999998 456666677789999999999999999999999999999999999
Q ss_pred eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee--------------------ece---------------------E
Q psy7433 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--------------------SPV---------------------K 126 (213)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------~~v---------------------~ 126 (213)
+.+..+.+|...|.+++|+|+++.|++++.|+.++ ..+ .
T Consensus 172 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~ 251 (420)
T 3vl1_A 172 SNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKN 251 (420)
T ss_dssp CCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCC
T ss_pred cCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCccc
Confidence 98889999999999999999999999999999886 223 3
Q ss_pred EEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC--eEEEEecCCcEEEEeCCC
Q psy7433 127 CLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS--RLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 127 ~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~d~~i~iw~~~~ 204 (213)
+++|+|++++|++++.||.|++||+++++....+...+ ...|.+++|+|++ +|++++.||.|++||+.+
T Consensus 252 ~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---------~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~ 322 (420)
T 3vl1_A 252 NLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKF---------TCSCNSLTVDGNNANYIYAGYENGMLAQWDLRS 322 (420)
T ss_dssp TTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTT---------SSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred ceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEccccc---------CCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCC
Confidence 35567899999999999999999999988877776533 2689999999964 699999999999999998
Q ss_pred Ccccc
Q psy7433 205 RDAVV 209 (213)
Q Consensus 205 ~~~~~ 209 (213)
++.++
T Consensus 323 ~~~~~ 327 (420)
T 3vl1_A 323 PECPV 327 (420)
T ss_dssp TTSCS
T ss_pred CcCch
Confidence 76543
No 53
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.9e-31 Score=197.36 Aligned_cols=189 Identities=17% Similarity=0.312 Sum_probs=167.3
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEec
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL 84 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~ 84 (213)
+|...|.+++|+|++++|+++ +.|+.|++||++.. .......+..|...+.+++|+|++++|++++.|+.|++||+
T Consensus 95 ~~~~~v~~~~~~~~~~~l~~~---~~d~~i~~~d~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~ 170 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDGCTLIVG---GEASTLSIWDLAAP-TPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL 170 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEE---ESSSEEEEEECCCC---EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CCCCcEEEEEEcCCCCEEEEE---cCCCcEEEEECCCC-CcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeC
Confidence 789999999999999999999 68999999999532 22355667788899999999999999999999999999999
Q ss_pred cCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------eceEEEEEccCCceEEEecCCCcEEE
Q psy7433 85 RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------SPVKCLAIDPHEEFFVTGAGDGDIKV 148 (213)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------~~v~~~~~~~~~~~l~~~~~dg~i~v 148 (213)
++++.+..+..|...+.+++|+|+++.+++++.++.++ ..+.+++|+|+++++++++.++.|++
T Consensus 171 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~ 250 (337)
T 1gxr_A 171 HNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEV 250 (337)
T ss_dssp TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEE
Confidence 99999999999999999999999999999999999886 67899999999999999999999999
Q ss_pred EEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCccc
Q psy7433 149 WSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 149 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
||+++++.. .+..|. ..|.+++|+|++ +|++++.||.|++||+.+++..
T Consensus 251 ~~~~~~~~~-~~~~~~----------~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 251 LHVNKPDKY-QLHLHE----------SCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI 300 (337)
T ss_dssp EETTSSCEE-EECCCS----------SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred EECCCCCeE-EEcCCc----------cceeEEEECCCCCEEEEecCCCcEEEEECCCCeEE
Confidence 999887654 444544 789999999965 6999999999999999987654
No 54
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=6e-32 Score=221.31 Aligned_cols=200 Identities=19% Similarity=0.294 Sum_probs=165.8
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
+|++|.+.|.+++|+|++++||++ +.+|.|++||+ .++..+..+..|...|.+++|+|++++|++++.||.|++
T Consensus 8 ~~~~h~~~v~~i~~sp~~~~la~~---~~~g~v~iwd~---~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v 81 (814)
T 3mkq_A 8 TFSNRSDRVKGIDFHPTEPWVLTT---LYSGRVEIWNY---ETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRV 81 (814)
T ss_dssp EEEEECSCEEEEEECSSSSEEEEE---ETTSEEEEEET---TTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEE
T ss_pred eeecCCCceEEEEECCCCCEEEEE---eCCCEEEEEEC---CCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEE
Confidence 578999999999999999999999 68999999998 567788888899999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------eceEEEEEcc-CCceEEEecC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPVKCLAIDP-HEEFFVTGAG 142 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v~~~~~~~-~~~~l~~~~~ 142 (213)
||+.+++.+..+..|...|.+++|+|+++.+++++.|+.++ ..+.+++|+| +++++++++.
T Consensus 82 w~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~ 161 (814)
T 3mkq_A 82 FNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCL 161 (814)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEET
T ss_pred EECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeC
Confidence 99999999999999999999999999999999999999876 5677888888 6778888888
Q ss_pred CCcEEEEEccCCeeeeeec-----------------C-----------------CC-CceeEEEecCCCeEEEEeCCCC-
Q psy7433 143 DGDIKVWSLSGNHLLYNFP-----------------G-----------------EH-ARSSFFKHIGQGVTQLHVDGGS- 186 (213)
Q Consensus 143 dg~i~v~d~~~~~~~~~~~-----------------~-----------------~~-~~~~~~~~~~~~v~~~~~~~~~- 186 (213)
||.|++||++++.....+. + .. ........+...|.+++|+|++
T Consensus 162 dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~ 241 (814)
T 3mkq_A 162 DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLP 241 (814)
T ss_dssp TSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSS
T ss_pred CCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCC
Confidence 8888888875432211110 0 00 0011123355789999999965
Q ss_pred eEEEEecCCcEEEEeCCCCcc
Q psy7433 187 RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 187 ~l~s~~~d~~i~iw~~~~~~~ 207 (213)
.+++++.||.|++||+.+++.
T Consensus 242 ~l~~~~~dg~v~vwd~~~~~~ 262 (814)
T 3mkq_A 242 IIISGSEDGTLKIWNSSTYKV 262 (814)
T ss_dssp EEEEEETTSCEEEEETTTCSE
T ss_pred EEEEEeCCCeEEEEECCCCcE
Confidence 699999999999999987643
No 55
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-32 Score=207.07 Aligned_cols=193 Identities=13% Similarity=0.218 Sum_probs=167.5
Q ss_pred ccccccCceEEEEEeCC-CCeEEEeeccCCCccEEEEeCCCcc------cccceeeeeeecCCceEEEEecC-CCEEEEE
Q psy7433 2 TYQCHNKITSDFVFLGS-CSLVATAGHSSESKNVCLWDSLLPQ------KKALVQAFVCHDQGASSLVFAPQ-HQLLISA 73 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~-~~~l~~~g~~s~~~~i~iwd~~~~~------~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~ 73 (213)
++.+|.+.|.+++|+|+ +++|+++ +.|+.|++||++... ..........|...+.+++|+|+ +.+|+++
T Consensus 108 ~~~~h~~~v~~~~~~~~~~~~l~s~---~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 184 (416)
T 2pm9_A 108 RFSNHSSSVKTVKFNAKQDNVLASG---GNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASA 184 (416)
T ss_dssp ECCCSSSCCCEEEECSSSTTBEEEE---CSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEE
T ss_pred hccCCccceEEEEEcCCCCCEEEEE---cCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEE
Confidence 46789999999999998 8999999 789999999996433 12223334678899999999998 7899999
Q ss_pred cCCCcEEEEeccCceEEEecccC------CCCeeEEEecCCC-CEEEEecCCC---cee-------------------ec
Q psy7433 74 GKKGDICVIDLRQRVIRSRFNAH------ESPVKCLAIDPHE-EFFVTGAGDG---DIK-------------------SP 124 (213)
Q Consensus 74 ~~d~~v~iwd~~~~~~~~~~~~~------~~~i~~~~~~~~~-~~l~~~~~~~---~i~-------------------~~ 124 (213)
+.|+.|++||+++++.+..+..+ ...+.+++|+|++ ..+++++.++ .++ ..
T Consensus 185 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 264 (416)
T 2pm9_A 185 GSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKG 264 (416)
T ss_dssp SSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSC
T ss_pred cCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCc
Confidence 99999999999999988888766 7889999999987 6899999887 654 56
Q ss_pred eEEEEEcc-CCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC--eEEEEecCCcEEEEe
Q psy7433 125 VKCLAIDP-HEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS--RLFSCGADGSMKVRQ 201 (213)
Q Consensus 125 v~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~d~~i~iw~ 201 (213)
|.+++|+| ++++|++++.|+.|++||+++++.+..+..|. ..|.+++|+|++ +|++++.|+.|++|+
T Consensus 265 v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~----------~~v~~~~~s~~~~~~l~s~~~d~~i~iw~ 334 (416)
T 2pm9_A 265 ILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARG----------NWCFKTKFAPEAPDLFACASFDNKIEVQT 334 (416)
T ss_dssp EEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSS----------SCCCCEEECTTCTTEEEECCSSSEEEEEE
T ss_pred eeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCC----------CceEEEEECCCCCCEEEEEecCCcEEEEE
Confidence 89999999 89999999999999999999999999988876 789999999964 699999999999999
Q ss_pred CCCCcc
Q psy7433 202 LPDRDA 207 (213)
Q Consensus 202 ~~~~~~ 207 (213)
+.+...
T Consensus 335 ~~~~~~ 340 (416)
T 2pm9_A 335 LQNLTN 340 (416)
T ss_dssp SCCCCC
T ss_pred ccCCCC
Confidence 987654
No 56
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2e-32 Score=201.98 Aligned_cols=189 Identities=17% Similarity=0.211 Sum_probs=155.1
Q ss_pred ccccccCceEEEEEeC--CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecC--CCEEEEEcCCC
Q psy7433 2 TYQCHNKITSDFVFLG--SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQ--HQLLISAGKKG 77 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~--~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~ 77 (213)
+|++|.++|++++|+| ++++|+++ +.|++|++||++.. .......+.+|...|.+++|+|+ +.+|++++.|+
T Consensus 52 ~l~gH~~~V~~v~~~~~~~~~~l~s~---s~D~~v~iWd~~~~-~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~ 127 (316)
T 3bg1_A 52 DLRGHEGPVWQVAWAHPMYGNILASC---SYDRKVIIWREENG-TWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDG 127 (316)
T ss_dssp EEECCSSCEEEEEECCGGGSSCEEEE---ETTSCEEEECCSSS-CCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSS
T ss_pred EEcCCCccEEEEEeCCCCCCCEEEEE---ECCCEEEEEECCCC-cceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCC
Confidence 4789999999999986 48999999 68999999998532 12355667789999999999997 78999999999
Q ss_pred cEEEEeccCce---EEEecccCCCCeeEEEecCC-----------------CCEEEEecCCCcee---------------
Q psy7433 78 DICVIDLRQRV---IRSRFNAHESPVKCLAIDPH-----------------EEFFVTGAGDGDIK--------------- 122 (213)
Q Consensus 78 ~v~iwd~~~~~---~~~~~~~~~~~i~~~~~~~~-----------------~~~l~~~~~~~~i~--------------- 122 (213)
.|++||++++. ....+..|...+.+++|+|+ +++|++++.|+.++
T Consensus 128 ~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~ 207 (316)
T 3bg1_A 128 AISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQK 207 (316)
T ss_dssp CEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEEC
T ss_pred CEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeee
Confidence 99999998753 23456678889999999997 46899999998775
Q ss_pred -----eceEEEEEccCC----ceEEEecCCCcEEEEEccCCe----eeeeecCCCCceeEEEecCCCeEEEEeCCCC-eE
Q psy7433 123 -----SPVKCLAIDPHE----EFFVTGAGDGDIKVWSLSGNH----LLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RL 188 (213)
Q Consensus 123 -----~~v~~~~~~~~~----~~l~~~~~dg~i~v~d~~~~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l 188 (213)
..|.+++|+|++ ++|++++.|+.|++||+++.. ....+..| ...|.+++|+|++ +|
T Consensus 208 l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~----------~~~v~~v~~sp~g~~l 277 (316)
T 3bg1_A 208 LEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKF----------NDVVWHVSWSITANIL 277 (316)
T ss_dssp CBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEEC----------SSCEEEEEECTTTCCE
T ss_pred cccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcC----------CCcEEEEEEcCCCCEE
Confidence 458999999986 789999999999999987521 11122222 3789999999965 69
Q ss_pred EEEecCCcEEEEeCCC
Q psy7433 189 FSCGADGSMKVRQLPD 204 (213)
Q Consensus 189 ~s~~~d~~i~iw~~~~ 204 (213)
++++.|+.|++|+...
T Consensus 278 as~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 278 AVSGGDNKVTLWKESV 293 (316)
T ss_dssp EEEESSSCEEEEEECT
T ss_pred EEEcCCCeEEEEEECC
Confidence 9999999999999863
No 57
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.5e-31 Score=196.71 Aligned_cols=189 Identities=20% Similarity=0.272 Sum_probs=165.2
Q ss_pred ccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee--eecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 4 QCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV--CHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 4 ~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
.+|.+.|.+++|+|++++|+++ + |+.|++||++.......+..+. .|...+.+++|+|++++|++++.|+.|++
T Consensus 48 ~~h~~~v~~~~~~~~~~~l~~~---~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 123 (337)
T 1gxr_A 48 LNHGEVVCAVTISNPTRHVYTG---G-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSI 123 (337)
T ss_dssp ECCSSCCCEEEECSSSSEEEEE---C-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEE
T ss_pred ccCCCceEEEEEecCCcEEEEc---C-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEE
Confidence 4799999999999999999999 6 9999999996544444444444 68889999999999999999999999999
Q ss_pred EeccCce--EEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecC
Q psy7433 82 IDLRQRV--IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAG 142 (213)
Q Consensus 82 wd~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~ 142 (213)
||+++++ ....+..+...+.+++|+|+++.+++++.++.++ ..+.+++|+|+++++++++.
T Consensus 124 ~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 203 (337)
T 1gxr_A 124 WDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGL 203 (337)
T ss_dssp EECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEec
Confidence 9999876 5667778889999999999999999999999886 67999999999999999999
Q ss_pred CCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 143 DGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 143 dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
||.|++||+++++.+..+... ..+.+++|+|++ .|++++.|+.|++||+.+.+.
T Consensus 204 dg~i~~~d~~~~~~~~~~~~~-----------~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~ 258 (337)
T 1gxr_A 204 DNTVRSWDLREGRQLQQHDFT-----------SQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK 258 (337)
T ss_dssp TSEEEEEETTTTEEEEEEECS-----------SCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE
T ss_pred CCcEEEEECCCCceEeeecCC-----------CceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe
Confidence 999999999999888777542 679999999965 689999999999999987653
No 58
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=7.3e-32 Score=201.65 Aligned_cols=184 Identities=16% Similarity=0.230 Sum_probs=149.3
Q ss_pred ccCceEEEEEeCC----CCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec-CCCEEEEEcCCCcEE
Q psy7433 6 HNKITSDFVFLGS----CSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP-QHQLLISAGKKGDIC 80 (213)
Q Consensus 6 h~~~v~~~~~~~~----~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~ 80 (213)
|.+.|.+++|+|+ +++|+++ +.|+.|++||+ .+.+.+..+.+|...|.+++|+| ++++|++++.||.|+
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~---~~dg~i~v~d~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~ 141 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVA---GSRGIIRIINP---ITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALR 141 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEE---ETTCEEEEECT---TTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEE
T ss_pred CCCcEEEEEeccCCCCCCCEEEEe---cCCCEEEEEEc---hhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEE
Confidence 6688999999998 6789998 68999999999 56677888888999999999999 899999999999999
Q ss_pred EEeccCceEEEec---ccCCCCeeEEEecCCCCEEEEecCCCcee-----------------------------------
Q psy7433 81 VIDLRQRVIRSRF---NAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------------------------- 122 (213)
Q Consensus 81 iwd~~~~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------------------------- 122 (213)
+||+++++.+..+ ..|...|.+++|+|+++.|++++.|+.++
T Consensus 142 iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (366)
T 3k26_A 142 LWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHF 221 (366)
T ss_dssp EEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECC
T ss_pred EEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeecc
Confidence 9999999888887 67999999999999999999999998775
Q ss_pred ----------e------------------------------------------------------ceEEEEEccC--Cce
Q psy7433 123 ----------S------------------------------------------------------PVKCLAIDPH--EEF 136 (213)
Q Consensus 123 ----------~------------------------------------------------------~v~~~~~~~~--~~~ 136 (213)
. .|.+++|+|+ +++
T Consensus 222 ~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~ 301 (366)
T 3k26_A 222 PDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKM 301 (366)
T ss_dssp CSEEECSSCSSCCCEEEEETTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSE
T ss_pred CccccccCCcceEEEEEEcCCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcE
Confidence 1 2334555565 666
Q ss_pred EEEecCCCcEEEEEccCCee----eeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCC
Q psy7433 137 FVTGAGDGDIKVWSLSGNHL----LYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLP 203 (213)
Q Consensus 137 l~~~~~dg~i~v~d~~~~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~ 203 (213)
|++++.||.|++||+++++. ...+..|.. ...|.+++|+|++ +|++++.||.|++||+.
T Consensus 302 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~--------~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 302 LALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKC--------GAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp EEEECTTSCEEEEECCSSSGGGCEEEEECCTTC--------CSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EEEEecCCcEEEEECCCCCCccccceEEccccc--------CCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 66666666666666655432 223444310 3789999999965 69999999999999985
No 59
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.3e-31 Score=200.24 Aligned_cols=187 Identities=16% Similarity=0.187 Sum_probs=162.2
Q ss_pred ccccccCceEEEEEeCC---CCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCc
Q psy7433 2 TYQCHNKITSDFVFLGS---CSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGD 78 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~---~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 78 (213)
.+++|.+.|++++|+|+ |++|+++ +.|+.|++||++.. .......+.+|...|.+++|+|++++|++++.||.
T Consensus 34 ~~~~h~~~v~~~~~~~~~~~g~~l~~~---~~dg~i~iw~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~ 109 (368)
T 3mmy_A 34 VTSSPDDSIGCLSFSPPTLPGNFLIAG---SWANDVRCWEVQDS-GQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKT 109 (368)
T ss_dssp CSSCCSSCEEEEEECCTTSSSEEEEEE---ETTSEEEEEEECTT-SCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSE
T ss_pred eccCCCCceEEEEEcCCCCCceEEEEE---CCCCcEEEEEcCCC-CceeEEEeccccCCEEEEEECcCCCEEEEEcCCCc
Confidence 46899999999999998 5999999 68999999999421 22333678889999999999999999999999999
Q ss_pred EEEEeccCceEEEecccCCCCeeEEEe--cCCCCEEEEecCCCcee----------------------------------
Q psy7433 79 ICVIDLRQRVIRSRFNAHESPVKCLAI--DPHEEFFVTGAGDGDIK---------------------------------- 122 (213)
Q Consensus 79 v~iwd~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~~~~~i~---------------------------------- 122 (213)
|++||+++++.+. +..|...|.+++| +|++++|++++.|+.++
T Consensus 110 v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (368)
T 3mmy_A 110 AKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATA 188 (368)
T ss_dssp EEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEG
T ss_pred EEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeC
Confidence 9999999998776 4558999999999 88999999999888654
Q ss_pred -------------------------------------------------------------------------e------
Q psy7433 123 -------------------------------------------------------------------------S------ 123 (213)
Q Consensus 123 -------------------------------------------------------------------------~------ 123 (213)
.
T Consensus 189 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (368)
T 3mmy_A 189 ERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTS 268 (368)
T ss_dssp GGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----C
T ss_pred CCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeeccccccc
Confidence 1
Q ss_pred ------ceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCc
Q psy7433 124 ------PVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGS 196 (213)
Q Consensus 124 ------~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~ 196 (213)
.|.+++|+|++++|++++.||.|++||+++++++..+..|. ..|.+++|+|++ +|++++.|+.
T Consensus 269 ~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----------~~v~~~~~s~~g~~l~~~s~d~~ 338 (368)
T 3mmy_A 269 APQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLD----------QPISACCFNHNGNIFAYASSYDW 338 (368)
T ss_dssp CCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCS----------SCEEEEEECTTSSCEEEEECCCS
T ss_pred ccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCC----------CCceEEEECCCCCeEEEEecccc
Confidence 59999999999999999999999999999999999998876 789999999965 5999998886
Q ss_pred EEEEeCC
Q psy7433 197 MKVRQLP 203 (213)
Q Consensus 197 i~iw~~~ 203 (213)
.+.|++.
T Consensus 339 ~~~~~~~ 345 (368)
T 3mmy_A 339 SKGHEFY 345 (368)
T ss_dssp TTCGGGC
T ss_pred ccccccc
Confidence 6655544
No 60
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.1e-31 Score=193.27 Aligned_cols=189 Identities=17% Similarity=0.230 Sum_probs=170.0
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
.+..|...|.+++|+|++++|+++ +.|+.|++|++......+.+..+..|...+.++.| +++++++++.|+.|++
T Consensus 54 ~~~~~~~~v~~~~~~~~~~~l~~~---~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~ 128 (313)
T 3odt_A 54 VVYTGQGFLNSVCYDSEKELLLFG---GKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKV 128 (313)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEE---ETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEE
T ss_pred EeecCCccEEEEEECCCCCEEEEe---cCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEE
Confidence 356789999999999999999999 68999999999765566778888899999999999 5779999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecC-CCCEEEEecCCCcee----------------eceEEEEEccCCceEEEecCCC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDP-HEEFFVTGAGDGDIK----------------SPVKCLAIDPHEEFFVTGAGDG 144 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~i~----------------~~v~~~~~~~~~~~l~~~~~dg 144 (213)
|| .++....+..|...+.++++.| +++.+++++.++.++ ..+.+++|+|++. +++++.||
T Consensus 129 ~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg 205 (313)
T 3odt_A 129 WK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDG 205 (313)
T ss_dssp EE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTS
T ss_pred Ec--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCceEEEEeccCcccEEEEEEcCCCe-EEEccCCC
Confidence 99 6777888888999999999998 899999999999876 6799999999998 99999999
Q ss_pred cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCccc
Q psy7433 145 DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 145 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
.|++||+++++.+..+..|. ..|.+++|+|+++|++++.||.|++||+.+++..
T Consensus 206 ~i~i~d~~~~~~~~~~~~~~----------~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~ 259 (313)
T 3odt_A 206 LIKLVDMHTGDVLRTYEGHE----------SFVYCIKLLPNGDIVSCGEDRTVRIWSKENGSLK 259 (313)
T ss_dssp EEEEEETTTCCEEEEEECCS----------SCEEEEEECTTSCEEEEETTSEEEEECTTTCCEE
T ss_pred eEEEEECCchhhhhhhhcCC----------ceEEEEEEecCCCEEEEecCCEEEEEECCCCcee
Confidence 99999999999999988876 7899999999889999999999999999887543
No 61
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.3e-31 Score=204.25 Aligned_cols=198 Identities=19% Similarity=0.290 Sum_probs=157.0
Q ss_pred ccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcc--------cccceeeeeeec------------CCceEEEEec
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQ--------KKALVQAFVCHD------------QGASSLVFAP 65 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~--------~~~~~~~~~~~~------------~~v~~~~~~~ 65 (213)
|.+.|.+++|+|++++||++ +.||.|++||+.... ..+....+.+|. ..|.+++|+|
T Consensus 27 ~~~~V~~v~~s~~g~~la~g---~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~ 103 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATG---DKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLP 103 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEE---ETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECC
T ss_pred ccCcEEEEEECCCCCEEEEE---cCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcC
Confidence 57899999999999999999 689999999985322 112467788887 8899999999
Q ss_pred CC--CEEEEEcCCCcEEEEeccCceEE---------------------------------------Ee-cccCCCCeeEE
Q psy7433 66 QH--QLLISAGKKGDICVIDLRQRVIR---------------------------------------SR-FNAHESPVKCL 103 (213)
Q Consensus 66 ~~--~~l~~~~~d~~v~iwd~~~~~~~---------------------------------------~~-~~~~~~~i~~~ 103 (213)
++ .+|++++.|+.|++||+.+++.. .. ..+|...|.++
T Consensus 104 ~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 183 (447)
T 3dw8_B 104 QKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSI 183 (447)
T ss_dssp CCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEE
T ss_pred CCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEE
Confidence 88 79999999999999999875432 12 35788999999
Q ss_pred EecCCCCEEEEecCCCcee-------------------------eceEEEEEccCC-ceEEEecCCCcEEEEEccCCee-
Q psy7433 104 AIDPHEEFFVTGAGDGDIK-------------------------SPVKCLAIDPHE-EFFVTGAGDGDIKVWSLSGNHL- 156 (213)
Q Consensus 104 ~~~~~~~~l~~~~~~~~i~-------------------------~~v~~~~~~~~~-~~l~~~~~dg~i~v~d~~~~~~- 156 (213)
+|+|+++.|+++ .|+.++ ..|.+++|+|++ ++|++|+.||.|++||+++++.
T Consensus 184 ~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 262 (447)
T 3dw8_B 184 SINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALC 262 (447)
T ss_dssp EECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSS
T ss_pred EEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccc
Confidence 999999999998 788776 348999999998 8999999999999999998876
Q ss_pred ---eeeecCCCCce--eEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCccc
Q psy7433 157 ---LYNFPGEHARS--SFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 157 ---~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
...+..+.... ..+..+...|.+++|+|++ +|++++. +.|++||+......
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~ 319 (447)
T 3dw8_B 263 DRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRP 319 (447)
T ss_dssp CTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSC
T ss_pred cceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccc
Confidence 56666654210 0011122389999999976 5777777 99999999873333
No 62
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=6.2e-31 Score=200.96 Aligned_cols=186 Identities=20% Similarity=0.333 Sum_probs=143.0
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVI 82 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iw 82 (213)
+.+|...|++++|+|+|++||+| +.|+.|++||+ .+.+.+..+.+|...+.++.++ +.+|++|+.|+.+++|
T Consensus 143 ~~~~~~~V~sv~fspdg~~lasg---s~Dg~v~iWd~---~~~~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~ 214 (420)
T 4gga_A 143 MEQPGEYISSVAWIKEGNYLAVG---TSSAEVQLWDV---QQQKRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHH 214 (420)
T ss_dssp CCSTTCCEEEEEECTTSSEEEEE---ETTSCEEEEET---TTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEE
T ss_pred ecCCCCcEEEEEECCCCCEEEEE---ECCCeEEEEEc---CCCcEEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEe
Confidence 45788899999999999999999 68999999999 5677888899999999888774 6799999999999999
Q ss_pred eccCc-eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee---------------------eceEEEEEcc--------
Q psy7433 83 DLRQR-VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------------SPVKCLAIDP-------- 132 (213)
Q Consensus 83 d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------------~~v~~~~~~~-------- 132 (213)
|.... ..+..+.+|...+..+.++|+++.+++++.|+.++ ..|.+++|+|
T Consensus 215 d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~ 294 (420)
T 4gga_A 215 DVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLAT 294 (420)
T ss_dssp ETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEE
T ss_pred eecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEE
Confidence 98764 45566677788888888888888888888877664 3344444544
Q ss_pred ------------------------------------CCceEEEec--CCCcEEEEEccCCeeeeeecCCCCceeEEEecC
Q psy7433 133 ------------------------------------HEEFFVTGA--GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIG 174 (213)
Q Consensus 133 ------------------------------------~~~~l~~~~--~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~ 174 (213)
+++.+++++ .|+.|++||+++++++..+.+| .
T Consensus 295 ~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH----------~ 364 (420)
T 4gga_A 295 GGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGH----------T 364 (420)
T ss_dssp EECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCC----------S
T ss_pred EeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCC----------C
Confidence 444433322 3455555555555555555544 4
Q ss_pred CCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCc
Q psy7433 175 QGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 175 ~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~ 206 (213)
..|++++|+|++ +|+|++.|++|+|||+.+..
T Consensus 365 ~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~ 397 (420)
T 4gga_A 365 SRVLSLTMSPDGATVASAAADETLRLWRCFELD 397 (420)
T ss_dssp SCEEEEEECTTSSCEEEEETTTEEEEECCSCSS
T ss_pred CCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 789999999975 69999999999999997653
No 63
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.3e-31 Score=201.41 Aligned_cols=195 Identities=12% Similarity=0.130 Sum_probs=159.4
Q ss_pred cCceEEEEEe----CCCCe-EEEeeccCCCccEEEEeCCCcc---ccccee-----eeee-------ecCCceEEEEecC
Q psy7433 7 NKITSDFVFL----GSCSL-VATAGHSSESKNVCLWDSLLPQ---KKALVQ-----AFVC-------HDQGASSLVFAPQ 66 (213)
Q Consensus 7 ~~~v~~~~~~----~~~~~-l~~~g~~s~~~~i~iwd~~~~~---~~~~~~-----~~~~-------~~~~v~~~~~~~~ 66 (213)
...|.+++|+ |++++ |+++ +.|+.|++||++... ....+. .+.+ |...+.+++|+|+
T Consensus 121 ~~~v~~~~~~~~~~~~~~~~l~~~---~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 197 (397)
T 1sq9_A 121 KHSFWALKWGASNDRLLSHRLVAT---DVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISER 197 (397)
T ss_dssp GSCEEEEEEECCC----CEEEEEE---ETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTT
T ss_pred CCcEEEEEEeeccCCCCceEEEEE---eCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCC
Confidence 5899999999 99999 9998 689999999984300 034444 5543 7889999999999
Q ss_pred CCEEEEEcCCCcEEEEeccCceEEEeccc---C---CCCeeEEEecCCCCEEEEecCC---Ccee--------------e
Q psy7433 67 HQLLISAGKKGDICVIDLRQRVIRSRFNA---H---ESPVKCLAIDPHEEFFVTGAGD---GDIK--------------S 123 (213)
Q Consensus 67 ~~~l~~~~~d~~v~iwd~~~~~~~~~~~~---~---~~~i~~~~~~~~~~~l~~~~~~---~~i~--------------~ 123 (213)
+ +|++++.|+.|++||+++++.+..+.. | ...+.+++|+|++++|++++.+ +.++ .
T Consensus 198 ~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~ 276 (397)
T 1sq9_A 198 G-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSV 276 (397)
T ss_dssp S-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECB
T ss_pred c-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceecc
Confidence 9 999999999999999999999999988 8 8999999999999999999999 7765 2
Q ss_pred ----------------ceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeec------CCCCce-----eEEEecCCC
Q psy7433 124 ----------------PVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFP------GEHARS-----SFFKHIGQG 176 (213)
Q Consensus 124 ----------------~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~------~~~~~~-----~~~~~~~~~ 176 (213)
.|.+++|+|++++|++++.||.|++||+++++.+..+. .|.... .....+...
T Consensus 277 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 356 (397)
T 1sq9_A 277 PTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPG 356 (397)
T ss_dssp C--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCC
T ss_pred CcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCc
Confidence 47899999999999999999999999999999999888 540000 000111378
Q ss_pred eEEEEeCCCC-----------eEEEEecCCcEEEEeCCCC
Q psy7433 177 VTQLHVDGGS-----------RLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 177 v~~~~~~~~~-----------~l~s~~~d~~i~iw~~~~~ 205 (213)
|.+++|+|++ .|++++.||.|++|++.++
T Consensus 357 v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 357 VFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp EEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred eeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 9999999974 7999999999999999875
No 64
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-31 Score=199.34 Aligned_cols=190 Identities=18% Similarity=0.256 Sum_probs=160.1
Q ss_pred ccccccCceEEEEEeCC--CCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecC--CCEEEEEcCCC
Q psy7433 2 TYQCHNKITSDFVFLGS--CSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQ--HQLLISAGKKG 77 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~--~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~ 77 (213)
++.+|.+.|++++|+|+ +++|+++ +.|+.|++||++.. ....+..+..|...|.+++|+|+ +++|++++.|+
T Consensus 50 ~~~~h~~~v~~~~~~~~~~~~~l~s~---~~dg~v~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~ 125 (379)
T 3jrp_A 50 TLTGHEGPVWRVDWAHPKFGTILASC---SYDGKVLIWKEENG-RWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG 125 (379)
T ss_dssp EECCCSSCEEEEEECCGGGCSEEEEE---ETTSCEEEEEEETT-EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred EecCCCCcEEEEEeCCCCCCCEEEEe---ccCCEEEEEEcCCC-ceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCC
Confidence 46789999999999987 9999999 68999999998421 12266677789999999999998 99999999999
Q ss_pred cEEEEeccCc--eEEEecccCCCCeeEEEecC-------------CCCEEEEecCCCcee--------------------
Q psy7433 78 DICVIDLRQR--VIRSRFNAHESPVKCLAIDP-------------HEEFFVTGAGDGDIK-------------------- 122 (213)
Q Consensus 78 ~v~iwd~~~~--~~~~~~~~~~~~i~~~~~~~-------------~~~~l~~~~~~~~i~-------------------- 122 (213)
.|++||++++ .....+..|...+.+++|+| ++..+++++.|+.++
T Consensus 126 ~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h 205 (379)
T 3jrp_A 126 KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH 205 (379)
T ss_dssp EEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC
T ss_pred cEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecc
Confidence 9999999887 34445667899999999999 689999999999886
Q ss_pred -eceEEEEEccC---CceEEEecCCCcEEEEEccCCe-----eeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEe
Q psy7433 123 -SPVKCLAIDPH---EEFFVTGAGDGDIKVWSLSGNH-----LLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCG 192 (213)
Q Consensus 123 -~~v~~~~~~~~---~~~l~~~~~dg~i~v~d~~~~~-----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~ 192 (213)
..|.+++|+|+ +++|++++.||.|++||++++. .......+. ..|.+++|+|++ +|++++
T Consensus 206 ~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~----------~~v~~~~~s~~g~~l~~~~ 275 (379)
T 3jrp_A 206 SDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFP----------DVLWRASWSLSGNVLALSG 275 (379)
T ss_dssp SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCS----------SCEEEEEECSSSCCEEEEE
T ss_pred cCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCC----------CcEEEEEEcCCCCEEEEec
Confidence 56889999999 8999999999999999998753 222222232 689999999965 589999
Q ss_pred cCCcEEEEeCCCC
Q psy7433 193 ADGSMKVRQLPDR 205 (213)
Q Consensus 193 ~d~~i~iw~~~~~ 205 (213)
.||.|++|++...
T Consensus 276 ~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 276 GDNKVTLWKENLE 288 (379)
T ss_dssp SSSSEEEEEEEET
T ss_pred CCCcEEEEeCCCC
Confidence 9999999999743
No 65
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.9e-31 Score=198.98 Aligned_cols=187 Identities=12% Similarity=0.127 Sum_probs=162.2
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccc--eeeeeeecCCceEEEEecCCCEEEEEcCCCcE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKAL--VQAFVCHDQGASSLVFAPQHQLLISAGKKGDI 79 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v 79 (213)
++.+|...|.+++|+|++++|+++ +.|+.|++||++ ..+. ...+..|...+.+++|+|++++|++++.|+.|
T Consensus 47 ~~~~h~~~v~~~~~~~~~~~l~~~---~~dg~i~vwd~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v 120 (372)
T 1k8k_C 47 ELKEHNGQVTGVDWAPDSNRIVTC---GTDRNAYVWTLK---GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVI 120 (372)
T ss_dssp EEECCSSCEEEEEEETTTTEEEEE---ETTSCEEEEEEE---TTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSE
T ss_pred eecCCCCcccEEEEeCCCCEEEEE---cCCCeEEEEECC---CCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEE
Confidence 467899999999999999999999 689999999984 3332 33345688899999999999999999999999
Q ss_pred EEEeccCce----EEEecccCCCCeeEEEecCCCCEEEEecCCCcee---------------------------------
Q psy7433 80 CVIDLRQRV----IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--------------------------------- 122 (213)
Q Consensus 80 ~iwd~~~~~----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------------------- 122 (213)
++||++.++ .......|...+.+++|+|++++|++++.|+.++
T Consensus 121 ~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (372)
T 1k8k_C 121 SICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSS 200 (372)
T ss_dssp EEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCC
T ss_pred EEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCC
Confidence 999998875 2233356788999999999999999999988663
Q ss_pred --eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEE
Q psy7433 123 --SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVR 200 (213)
Q Consensus 123 --~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw 200 (213)
..+.+++|+|++++|++++.|+.|++||+++++.+..+..+. .+|.+++|+|++.+++++.|+.|++|
T Consensus 201 ~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~----------~~v~~~~~~~~~~~l~~~~d~~i~i~ 270 (372)
T 1k8k_C 201 SCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASET----------LPLLAVTFITESSLVAAGHDCFPVLF 270 (372)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSS----------CCEEEEEEEETTEEEEEETTSSCEEE
T ss_pred CCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCC----------CCeEEEEEecCCCEEEEEeCCeEEEE
Confidence 468999999999999999999999999999999998888775 68999999998876666699999999
Q ss_pred eCCC
Q psy7433 201 QLPD 204 (213)
Q Consensus 201 ~~~~ 204 (213)
++.+
T Consensus 271 ~~~~ 274 (372)
T 1k8k_C 271 TYDS 274 (372)
T ss_dssp EEET
T ss_pred EccC
Confidence 9987
No 66
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.3e-30 Score=193.33 Aligned_cols=200 Identities=20% Similarity=0.295 Sum_probs=159.5
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccc-------------------------------------
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQK------------------------------------- 44 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~------------------------------------- 44 (213)
++++|...|.+++|+|++++|+++ +.|+.|++|+......
T Consensus 81 ~l~~h~~~V~~~~~s~dg~~l~s~---~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~ 157 (340)
T 4aow_A 81 ALRGHSHFVSDVVISSDGQFALSG---SWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT 157 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEE---ETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred EEeCCCCCEEEEEECCCCCEEEEE---cccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEe
Confidence 467899999999999999999999 6888898888743110
Q ss_pred ---ccceeeeeeecCCceEEEEecCC--CEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCC
Q psy7433 45 ---KALVQAFVCHDQGASSLVFAPQH--QLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDG 119 (213)
Q Consensus 45 ---~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~ 119 (213)
........+|...+..++|++++ .++++++.|+.|++||+++++.+..+.+|..+|.+++|+|++++|++++.|+
T Consensus 158 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg 237 (340)
T 4aow_A 158 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDG 237 (340)
T ss_dssp TSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTC
T ss_pred CCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCC
Confidence 00111123466788899998754 5788999999999999999999999999999999999999999999999999
Q ss_pred cee----------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeC
Q psy7433 120 DIK----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVD 183 (213)
Q Consensus 120 ~i~----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 183 (213)
.++ ..+.++.|+|++. +++++.|+.|++||++.+..+..+..+.. ......+...|++++|+
T Consensus 238 ~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~~~h~~~v~~l~~s 315 (340)
T 4aow_A 238 QAMLWDLNEGKHLYTLDGGDIINALCFSPNRY-WLCAATGPSIKIWDLEGKIIVDELKQEVI-STSSKAEPPQCTSLAWS 315 (340)
T ss_dssp EEEEEETTTTEEEEEEECSSCEEEEEECSSSS-EEEEEETTEEEEEETTTTEEEEEECCC--------CCCCCEEEEEEC
T ss_pred eEEEEEeccCceeeeecCCceEEeeecCCCCc-eeeccCCCEEEEEECCCCeEEEeccccce-eeeccCCCCCEEEEEEC
Confidence 886 6789999999876 55566799999999999888877765321 12233445789999999
Q ss_pred CCC-eEEEEecCCcEEEEeCCCCc
Q psy7433 184 GGS-RLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 184 ~~~-~l~s~~~d~~i~iw~~~~~~ 206 (213)
|++ +|++++.||.|+|||+.++.
T Consensus 316 ~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 316 ADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp TTSSEEEEEETTSCEEEEEEEC--
T ss_pred CCCCEEEEEeCCCEEEEEeCCCcC
Confidence 975 69999999999999999875
No 67
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1e-30 Score=201.84 Aligned_cols=187 Identities=25% Similarity=0.406 Sum_probs=163.2
Q ss_pred ccccccCce-EEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEE
Q psy7433 2 TYQCHNKIT-SDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDIC 80 (213)
Q Consensus 2 ~l~~h~~~v-~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 80 (213)
+|++|...| .++.+ ++++|+++ +.|+.|++||+ .+.+.+..+.+|...|.+++|+|++ +|++|+.||.|+
T Consensus 116 ~l~~h~~~v~~~~~~--~~~~l~sg---s~dg~i~vwd~---~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~ 186 (464)
T 3v7d_B 116 TLRGHMTSVITCLQF--EDNYVITG---ADDKMIRVYDS---INKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVR 186 (464)
T ss_dssp EEECCSSSCEEEEEE--ETTEEEEE---ETTSCEEEEET---TTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEE
T ss_pred EEcCCCCCcEEEEEE--CCCEEEEE---cCCCcEEEEEC---CCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEE
Confidence 578898885 55555 56799999 68999999999 5677888889999999999999988 999999999999
Q ss_pred EEeccCceEEEecccCCCCeeEEEec--CCCCEEEEecCCCcee------------------------------------
Q psy7433 81 VIDLRQRVIRSRFNAHESPVKCLAID--PHEEFFVTGAGDGDIK------------------------------------ 122 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~~~i~~~~~~--~~~~~l~~~~~~~~i~------------------------------------ 122 (213)
+||+++++.+..+.+|...|.+++++ +++..+++++.|+.++
T Consensus 187 vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (464)
T 3v7d_B 187 VWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVL 266 (464)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEE
T ss_pred EEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEc
Confidence 99999999999999999999999998 4667777777776442
Q ss_pred --------------------------------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeee
Q psy7433 123 --------------------------------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLY 158 (213)
Q Consensus 123 --------------------------------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~ 158 (213)
..|.+++|+|+++++++|+.||.|++||+++++++.
T Consensus 267 ~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~ 346 (464)
T 3v7d_B 267 RGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMY 346 (464)
T ss_dssp CCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEE
T ss_pred cCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEE
Confidence 568899999999999999999999999999999999
Q ss_pred eecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCccc
Q psy7433 159 NFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
.+..|. ..|.++.++ +.+|++++.||.|++||+.+....
T Consensus 347 ~~~~h~----------~~v~~~~~~-~~~l~s~s~dg~v~vwd~~~~~~~ 385 (464)
T 3v7d_B 347 TLQGHT----------ALVGLLRLS-DKFLVSAAADGSIRGWDANDYSRK 385 (464)
T ss_dssp EECCCS----------SCEEEEEEC-SSEEEEEETTSEEEEEETTTCCEE
T ss_pred EEeCCC----------CcEEEEEEc-CCEEEEEeCCCcEEEEECCCCcee
Confidence 998876 789999998 468999999999999999876543
No 68
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.3e-31 Score=205.55 Aligned_cols=198 Identities=13% Similarity=0.196 Sum_probs=150.2
Q ss_pred ccccccCceEEEEEeC-CCCeEEEeeccCCCccEEEEeCCCcccccceeeee---eecCCceEEEEecCCCEEEEEcCCC
Q psy7433 2 TYQCHNKITSDFVFLG-SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV---CHDQGASSLVFAPQHQLLISAGKKG 77 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~ 77 (213)
.+.+|.+.|++++|+| ++++|+++ +.|++|++||++ .. ....+. .+...+.+++|+|++++|++|+.||
T Consensus 159 ~~~gH~~~V~~l~f~p~~~~~l~s~---s~D~~v~iwd~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg 231 (435)
T 4e54_B 159 KGIGAGGSITGLKFNPLNTNQFYAS---SMEGTTRLQDFK---GN-ILRVFASSDTINIWFCSLDVSASSRMVVTGDNVG 231 (435)
T ss_dssp CCCSSSCCCCEEEECSSCTTEEEEE---CSSSCEEEEETT---SC-EEEEEECCSSCSCCCCCEEEETTTTEEEEECSSS
T ss_pred EccCCCCCEEEEEEeCCCCCEEEEE---eCCCEEEEeecc---CC-ceeEEeccCCCCccEEEEEECCCCCEEEEEeCCC
Confidence 3568999999999998 68899999 799999999984 22 222222 2344678999999999999999999
Q ss_pred cEEEEeccCceEEEecccCCCCeeEEEecCCCC-EEEEecCCCcee--------------------eceEEEEEccCCce
Q psy7433 78 DICVIDLRQRVIRSRFNAHESPVKCLAIDPHEE-FFVTGAGDGDIK--------------------SPVKCLAIDPHEEF 136 (213)
Q Consensus 78 ~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~~i~--------------------~~v~~~~~~~~~~~ 136 (213)
.|++||++. +.+..+..|...|.+++|+|++. ++++++.|+.++ ..|.+++|+|++++
T Consensus 232 ~i~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~ 310 (435)
T 4e54_B 232 NVILLNMDG-KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGAR 310 (435)
T ss_dssp BEEEEESSS-CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSE
T ss_pred cEeeeccCc-ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCe
Confidence 999999864 55667888999999999999876 688899999875 57999999999999
Q ss_pred EEEecCCCcEEEEEccCCeeeeeecCCCC-------------------------------------------------ce
Q psy7433 137 FVTGAGDGDIKVWSLSGNHLLYNFPGEHA-------------------------------------------------RS 167 (213)
Q Consensus 137 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~-------------------------------------------------~~ 167 (213)
|++++.||.|++||+++++....+..|.. ..
T Consensus 311 l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~ 390 (435)
T 4e54_B 311 LLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKM 390 (435)
T ss_dssp EEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCE
T ss_pred eEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcE
Confidence 99999999999999987654333221110 00
Q ss_pred --eEEEecCCCeEEE-EeCCCCeEEEEecCCcEEEEeCCCCcc
Q psy7433 168 --SFFKHIGQGVTQL-HVDGGSRLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 168 --~~~~~~~~~v~~~-~~~~~~~l~s~~~d~~i~iw~~~~~~~ 207 (213)
.....+...|.++ +|+|++.+++++.|+.|+||++.+++.
T Consensus 391 ~~~l~~~~~~~v~s~~~fspdg~~lasg~d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 391 MCQLYDPESSGISSLNEFNPMGDTLASAMGYHILIWSQQEART 433 (435)
T ss_dssp EEEECCSSCCCCCCEEEECTTSSCEEEECSSEEEECCCC----
T ss_pred EEEEeCCCCCcEEEEEEECCCCCEEEEEcCCcEEEEECCcCee
Confidence 0012344566676 689977644445688999999988753
No 69
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=9.3e-31 Score=198.83 Aligned_cols=190 Identities=21% Similarity=0.305 Sum_probs=160.7
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
++.+|...|.+++| ++++|+++ +.|+.|++||++ .....+..+..|...|.+++|+|++++|++++.|+.|++
T Consensus 171 ~~~~~~~~v~~~~~--~~~~l~~~---~~dg~i~i~d~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~i 243 (401)
T 4aez_A 171 TMAGHQARVGCLSW--NRHVLSSG---SRSGAIHHHDVR--IANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQI 243 (401)
T ss_dssp EECCCSSCEEEEEE--ETTEEEEE---ETTSEEEEEETT--SSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred EecCCCCceEEEEE--CCCEEEEE---cCCCCEEEEecc--cCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEE
Confidence 46789999999999 45799998 689999999995 245567778889999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCC-EEEEec--CCCcee----------------eceEEEEEccCCceEEE--e
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEE-FFVTGA--GDGDIK----------------SPVKCLAIDPHEEFFVT--G 140 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~--~~~~i~----------------~~v~~~~~~~~~~~l~~--~ 140 (213)
||+++++.+..+..|...+.+++|+|++. .+++++ .|+.++ ..+.+++|+|+++++++ |
T Consensus 244 wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g 323 (401)
T 4aez_A 244 WDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHG 323 (401)
T ss_dssp EETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEEC
T ss_pred ccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEee
Confidence 99999999988988999999999999765 555544 688776 67999999999999998 5
Q ss_pred cCCCcEEEEEccCCeeeee--ecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCccc
Q psy7433 141 AGDGDIKVWSLSGNHLLYN--FPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 141 ~~dg~i~v~d~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
+.||.|++||+++++.... +..|. ..|.+++|+|++ +|++++.||.|++|++.+++.+
T Consensus 324 ~~dg~i~v~~~~~~~~~~~~~~~~h~----------~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~ 384 (401)
T 4aez_A 324 FPDNNLSIWSYSSSGLTKQVDIPAHD----------TRVLYSALSPDGRILSTAASDENLKFWRVYDGDHV 384 (401)
T ss_dssp TTTCEEEEEEEETTEEEEEEEEECCS----------SCCCEEEECTTSSEEEEECTTSEEEEEECCC----
T ss_pred cCCCcEEEEecCCccceeEEEecCCC----------CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccc
Confidence 5899999999998655443 55554 789999999965 6999999999999999987654
No 70
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-31 Score=204.98 Aligned_cols=190 Identities=13% Similarity=0.219 Sum_probs=155.3
Q ss_pred ccccCceEEEEEeC-CCCeEEEeeccCCCccEEEEeCCCccccc---ceeeeeeecCCceEEEEecCCCEEEEEcCCCcE
Q psy7433 4 QCHNKITSDFVFLG-SCSLVATAGHSSESKNVCLWDSLLPQKKA---LVQAFVCHDQGASSLVFAPQHQLLISAGKKGDI 79 (213)
Q Consensus 4 ~~h~~~v~~~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v 79 (213)
++|.+.|++++|+| ++++|+++ +.|+.|++||+....... ....+ .|...|.+++|+|++++|++++.||.|
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~---s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i 135 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITG---SDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQI 135 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEE---ETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred cCCCCceEEEEECCCCCCEEEEe---cCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEE
Confidence 78999999999999 99999999 689999999984311122 22222 589999999999999999999999999
Q ss_pred EEEecc---CceEEEecc----------c--CCCCeeEEE--ecCCCCEEEEecCCCcee-------------------e
Q psy7433 80 CVIDLR---QRVIRSRFN----------A--HESPVKCLA--IDPHEEFFVTGAGDGDIK-------------------S 123 (213)
Q Consensus 80 ~iwd~~---~~~~~~~~~----------~--~~~~i~~~~--~~~~~~~l~~~~~~~~i~-------------------~ 123 (213)
++||++ +++....+. . +...+.++. ++|++..+++++.|+.++ .
T Consensus 136 ~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~ 215 (437)
T 3gre_A 136 IVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHG 215 (437)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGC
T ss_pred EEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCC
Confidence 999995 443332221 1 455666776 567899999999999886 5
Q ss_pred ceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeec-CCCCceeEEEecCCCeEEEEeCC----CC-eEEEEecCCcE
Q psy7433 124 PVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFP-GEHARSSFFKHIGQGVTQLHVDG----GS-RLFSCGADGSM 197 (213)
Q Consensus 124 ~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~----~~-~l~s~~~d~~i 197 (213)
.|.+++|+|++++|++|+.||.|++||+++++++..+. .+. ..|.+++|+| ++ +|++++.||.|
T Consensus 216 ~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~----------~~v~~~~~~~~~s~~~~~l~s~~~dg~i 285 (437)
T 3gre_A 216 AVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDH----------APITHVEVCQFYGKNSVIVVGGSSKTFL 285 (437)
T ss_dssp CEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTC----------EEEEEEEECTTTCTTEEEEEEESTTEEE
T ss_pred ceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCC----------CceEEEEeccccCCCccEEEEEcCCCcE
Confidence 79999999999999999999999999999999988876 443 5799997765 44 68999999999
Q ss_pred EEEeCCCCcc
Q psy7433 198 KVRQLPDRDA 207 (213)
Q Consensus 198 ~iw~~~~~~~ 207 (213)
++||+.+++.
T Consensus 286 ~iwd~~~~~~ 295 (437)
T 3gre_A 286 TIWNFVKGHC 295 (437)
T ss_dssp EEEETTTTEE
T ss_pred EEEEcCCCcE
Confidence 9999987753
No 71
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.7e-31 Score=198.57 Aligned_cols=197 Identities=16% Similarity=0.206 Sum_probs=159.3
Q ss_pred ccccCceEEEEEeCC----CCeEEEeeccCCCccEEEEeCCCcccccceeeeee-----ecCCceEEEEecC----CCEE
Q psy7433 4 QCHNKITSDFVFLGS----CSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVC-----HDQGASSLVFAPQ----HQLL 70 (213)
Q Consensus 4 ~~h~~~v~~~~~~~~----~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~----~~~l 70 (213)
++|.++|++++|+|+ ...++++ ..++.|++||+ .....+..+.. |...|.+++|+|+ +++|
T Consensus 15 ~~h~~~v~~i~~~p~~~~~~~~~~~~---~~~~~v~vw~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l 88 (366)
T 3k26_A 15 EDHNQPLFGVQFNWHSKEGDPLVFAT---VGSNRVTLYEC---HSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLL 88 (366)
T ss_dssp CTTCSCEEEEEECTTCCTTSCEEEEE---EETTEEEEEEE---CGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEE
T ss_pred cCCCCceEEEEEecccCCCCceEEEE---CCCCEEEEEEc---CCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEE
Confidence 479999999999984 3344444 35779999998 44555555554 4467999999998 6799
Q ss_pred EEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecC-CCCEEEEecCCCcee--------------------eceEEEE
Q psy7433 71 ISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDP-HEEFFVTGAGDGDIK--------------------SPVKCLA 129 (213)
Q Consensus 71 ~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~i~--------------------~~v~~~~ 129 (213)
++++.||.|++||+.+++.+..+..|...|.+++|+| ++..|++++.|+.++ ..|.+++
T Consensus 89 ~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~ 168 (366)
T 3k26_A 89 AVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSAD 168 (366)
T ss_dssp EEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEE
T ss_pred EEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEE
Confidence 9999999999999999999999999999999999999 899999999999886 5789999
Q ss_pred EccCCceEEEecCCCcEEEEEccCCeeeeeecC------------------CCCceeEEEecCCCeEEEEeCCCCeEEEE
Q psy7433 130 IDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPG------------------EHARSSFFKHIGQGVTQLHVDGGSRLFSC 191 (213)
Q Consensus 130 ~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~------------------~~~~~~~~~~~~~~v~~~~~~~~~~l~s~ 191 (213)
|+|++++|++++.||.|++||+++++....+.. ..........+...|.+++|+ +++++++
T Consensus 169 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~ 247 (366)
T 3k26_A 169 YDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-GDLILSK 247 (366)
T ss_dssp ECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-TTEEEEE
T ss_pred ECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc-CCEEEEE
Confidence 999999999999999999999987765443332 000000111134789999999 6689999
Q ss_pred ecCCcEEEEeCCCCcc
Q psy7433 192 GADGSMKVRQLPDRDA 207 (213)
Q Consensus 192 ~~d~~i~iw~~~~~~~ 207 (213)
+.|+.|++||+.+...
T Consensus 248 ~~d~~i~~wd~~~~~~ 263 (366)
T 3k26_A 248 SCENAIVCWKPGKMED 263 (366)
T ss_dssp CSSSEEEEEEESSTTC
T ss_pred ecCCEEEEEeCCCccc
Confidence 9999999999987654
No 72
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1e-30 Score=194.94 Aligned_cols=200 Identities=17% Similarity=0.209 Sum_probs=154.3
Q ss_pred ccccccCceEEEEE------eCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecC----CceEEE----EecCC
Q psy7433 2 TYQCHNKITSDFVF------LGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQ----GASSLV----FAPQH 67 (213)
Q Consensus 2 ~l~~h~~~v~~~~~------~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~----~v~~~~----~~~~~ 67 (213)
++.+|...|.+++| +|++++|+++ +.|+.|++||++.. ...+..+..|.. .+.+++ |+|++
T Consensus 106 ~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~---~~d~~i~vwd~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 180 (357)
T 3i2n_A 106 SVKGHKEIINAIDGIGGLGIGEGAPEIVTG---SRDGTVKVWDPRQK--DDPVANMEPVQGENKRDCWTVAFGNAYNQEE 180 (357)
T ss_dssp EECCCSSCEEEEEEESGGGCC-CCCEEEEE---ETTSCEEEECTTSC--SSCSEEECCCTTSCCCCEEEEEEECCCC-CC
T ss_pred EEEecccceEEEeeccccccCCCccEEEEE---eCCCeEEEEeCCCC--CCcceeccccCCCCCCceEEEEEEeccCCCC
Confidence 46789999999965 6789999999 68999999999532 225556655544 788888 67899
Q ss_pred CEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecC---CCCEEEEecCCCcee----------------------
Q psy7433 68 QLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDP---HEEFFVTGAGDGDIK---------------------- 122 (213)
Q Consensus 68 ~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~---~~~~l~~~~~~~~i~---------------------- 122 (213)
++|++++.|+.|++||+++++.... ..+...+.+++|+| ++..+++++.++.++
T Consensus 181 ~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 259 (357)
T 3i2n_A 181 RVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHK 259 (357)
T ss_dssp CEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCS
T ss_pred CEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCc
Confidence 9999999999999999999887554 45788999999999 899999999999886
Q ss_pred eceEEEEEccCCc-eEEEecCCCcEEEEEccCCeeeeeecCCC---------CceeEEEecCCCeEEEEeCCCC-eEE-E
Q psy7433 123 SPVKCLAIDPHEE-FFVTGAGDGDIKVWSLSGNHLLYNFPGEH---------ARSSFFKHIGQGVTQLHVDGGS-RLF-S 190 (213)
Q Consensus 123 ~~v~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~~~~~~~~~~~---------~~~~~~~~~~~~v~~~~~~~~~-~l~-s 190 (213)
..|.+++|+|+++ ++++++.||.|++||++.+.......... ........+...|.+++|+|++ .|+ +
T Consensus 260 ~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s 339 (357)
T 3i2n_A 260 STVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVC 339 (357)
T ss_dssp SCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEE
T ss_pred CCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEE
Confidence 5689999999998 89999999999999998643221111100 0111123334789999999965 476 8
Q ss_pred EecCCcEEEEeCCCCcc
Q psy7433 191 CGADGSMKVRQLPDRDA 207 (213)
Q Consensus 191 ~~~d~~i~iw~~~~~~~ 207 (213)
++.|+.|++||+.+...
T Consensus 340 ~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 340 SSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp EETTSEEEEEEECC---
T ss_pred ecCCCcEEEEECCCccc
Confidence 99999999999987643
No 73
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.3e-31 Score=216.45 Aligned_cols=196 Identities=14% Similarity=0.147 Sum_probs=162.9
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVI 82 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iw 82 (213)
..+|.+.|++++|+|++++||++ +.|+.|+||+.. ..+....+ .|...|.+++|+| +++|++++.|+.|++|
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsg---s~Dg~I~lw~~~---~~~~~~~~-~~~~~V~~l~fsp-g~~L~S~s~D~~v~lW 84 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIA---TVTGEVHIYGQQ---QVEVVIKL-EDRSAIKEMRFVK-GIYLVVINAKDTVYVL 84 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEE---ETTSEEEEECST---TCEEEEEC-SSCCCEEEEEEET-TTEEEEEETTCEEEEE
T ss_pred ccCCCCCcEEEEECCCCCEEEEE---eCCCEEEEEeCC---CcEEEEEc-CCCCCEEEEEEcC-CCEEEEEECcCeEEEE
Confidence 35899999999999999999999 689999999973 33333333 3678899999999 8899999999999999
Q ss_pred eccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------------------eceEEEEEccC-
Q psy7433 83 DLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------------------SPVKCLAIDPH- 133 (213)
Q Consensus 83 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------------------~~v~~~~~~~~- 133 (213)
|+++++.+..+. +...|++++|+|+++++++|+.|+.++ ..|.+++|+|+
T Consensus 85 d~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~ 163 (902)
T 2oaj_A 85 SLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRD 163 (902)
T ss_dssp ETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTE
T ss_pred ECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCC
Confidence 999998888876 678899999999999999999999876 15789999996
Q ss_pred CceEEEecCCCcEEEEEccCCeeeeeecCCCCce--------eEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCC
Q psy7433 134 EEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARS--------SFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 134 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~--------~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~ 204 (213)
+..+++|+.||.| +||+++++.+..+..+.... .....+...|.+++|+|++ +|++++.||.|++||+.+
T Consensus 164 ~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~ 242 (902)
T 2oaj_A 164 IGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANS 242 (902)
T ss_dssp EEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTT
T ss_pred CCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCC
Confidence 4689999999999 99999999888887651100 0001223679999999975 599999999999999988
Q ss_pred Cccc
Q psy7433 205 RDAV 208 (213)
Q Consensus 205 ~~~~ 208 (213)
++.+
T Consensus 243 g~~~ 246 (902)
T 2oaj_A 243 GHMI 246 (902)
T ss_dssp CCEE
T ss_pred CcEE
Confidence 7543
No 74
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.2e-31 Score=199.76 Aligned_cols=185 Identities=17% Similarity=0.302 Sum_probs=163.1
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEec
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL 84 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~ 84 (213)
+|.+.|.+++|+|++++|+++ +.|+.|++||. ....+..+..|...|.+++|+|++++|++++.|+.|++||+
T Consensus 106 ~~~~~v~~~~~s~~~~~l~~~---~~dg~i~i~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 178 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNSIVTG---VENGELRLWNK----TGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNV 178 (425)
T ss_dssp --CBCEEEEEECTTSSEEEEE---ETTSCEEEEET----TSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEET
T ss_pred CCCCceEEEEEcCCCCEEEEE---eCCCeEEEEeC----CCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEEC
Confidence 478899999999999999999 68999999994 56677788889999999999999999999999999999999
Q ss_pred cCceEEEecccCCCC---------------eeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEcc
Q psy7433 85 RQRVIRSRFNAHESP---------------VKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDP 132 (213)
Q Consensus 85 ~~~~~~~~~~~~~~~---------------i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~ 132 (213)
++++.+..+..+... +.+++|+|++ .+++++.++.+. ..+.+++|+|
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~ 257 (425)
T 1r5m_A 179 ISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFND 257 (425)
T ss_dssp TTTEEEEEECCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEET
T ss_pred CCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECC
Confidence 999988888777666 9999999975 578888888775 6789999999
Q ss_pred CCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCcc
Q psy7433 133 HEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 133 ~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 207 (213)
++++|++++.|+.|++||+++++....+..|. ..|.+++|+|++.+++++.|+.|++||+.+++.
T Consensus 258 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~----------~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 322 (425)
T 1r5m_A 258 TNKLLLSASDDGTLRIWHGGNGNSQNCFYGHS----------QSIVSASWVGDDKVISCSMDGSVRLWSLKQNTL 322 (425)
T ss_dssp TTTEEEEEETTSCEEEECSSSBSCSEEECCCS----------SCEEEEEEETTTEEEEEETTSEEEEEETTTTEE
T ss_pred CCCEEEEEcCCCEEEEEECCCCccceEecCCC----------ccEEEEEECCCCEEEEEeCCCcEEEEECCCCcE
Confidence 99999999999999999999988888887765 789999999988999999999999999987754
No 75
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=6.7e-30 Score=187.81 Aligned_cols=185 Identities=19% Similarity=0.305 Sum_probs=159.8
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVI 82 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iw 82 (213)
+.+|...|++++|+|++++|+++ +.|+.|++||+ .+++.+..+.+|...+.++. +++..+++++.++.+++|
T Consensus 63 ~~~~~~~V~~v~~~~~~~~l~sg---s~Dg~v~iw~~---~~~~~~~~~~~h~~~~~~~~--~~~~~l~s~~~~~~~~~~ 134 (318)
T 4ggc_A 63 MEQPGEYISSVAWIKEGNYLAVG---TSSAEVQLWDV---QQQKRLRNMTSHSARVGSLS--WNSYILSSGSRSGHIHHH 134 (318)
T ss_dssp CCSTTCCEEEEEECTTSSEEEEE---ETTSEEEEEET---TTTEEEEEEECCSSCEEEEE--EETTEEEEEETTSEEEEE
T ss_pred ecCCCCeEEEEEECCCCCEEEEE---ECCCcEEEeec---CCceeEEEecCccceEEEee--cCCCEEEEEecCCceEee
Confidence 45788899999999999999999 68999999999 56778888888888776554 567799999999999999
Q ss_pred eccCc-eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee---------------------------------------
Q psy7433 83 DLRQR-VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--------------------------------------- 122 (213)
Q Consensus 83 d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------------------------- 122 (213)
+.... ..+..+.+|...+..+.+.++++.+++++.|+.++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 214 (318)
T 4ggc_A 135 DVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLAT 214 (318)
T ss_dssp ETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEE
T ss_pred ecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEE
Confidence 99875 55667778999999999999999999999999775
Q ss_pred --------------------------eceEEEEEccCCceEEEe--cCCCcEEEEEccCCeeeeeecCCCCceeEEEecC
Q psy7433 123 --------------------------SPVKCLAIDPHEEFFVTG--AGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIG 174 (213)
Q Consensus 123 --------------------------~~v~~~~~~~~~~~l~~~--~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~ 174 (213)
..+..+.|+|+++.++++ +.|+.|++||+++++++..+.+|.
T Consensus 215 ~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~---------- 284 (318)
T 4ggc_A 215 GGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHT---------- 284 (318)
T ss_dssp EECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCS----------
T ss_pred EecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCC----------
Confidence 456778888888866654 478999999999999999999886
Q ss_pred CCeEEEEeCCCC-eEEEEecCCcEEEEeCCCC
Q psy7433 175 QGVTQLHVDGGS-RLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 175 ~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~ 205 (213)
+.|++++|+|++ +|+|++.||.|+|||+.+.
T Consensus 285 ~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 285 SRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp SCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred CCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 789999999965 6999999999999999765
No 76
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-30 Score=192.96 Aligned_cols=189 Identities=17% Similarity=0.296 Sum_probs=163.3
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeee------------------------------
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAF------------------------------ 51 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~------------------------------ 51 (213)
++++|...|.+++|+|++++|+++ +.|+.|++||++.. +.+..+
T Consensus 69 ~~~~h~~~v~~~~~~~~~~~l~s~---~~dg~i~iwd~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g 142 (369)
T 3zwl_B 69 TLDGHTGTIWSIDVDCFTKYCVTG---SADYSIKLWDVSNG---QCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPG 142 (369)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEE---ETTTEEEEEETTTC---CEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCC
T ss_pred hhhhcCCcEEEEEEcCCCCEEEEE---eCCCeEEEEECCCC---cEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCC
Confidence 467899999999999999999999 68999999998532 111111
Q ss_pred ---------------------------eeecC--CceEEEEecCCCEEEEEcCCCcEEEEeccC-ceEEEecccCCCCee
Q psy7433 52 ---------------------------VCHDQ--GASSLVFAPQHQLLISAGKKGDICVIDLRQ-RVIRSRFNAHESPVK 101 (213)
Q Consensus 52 ---------------------------~~~~~--~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~-~~~~~~~~~~~~~i~ 101 (213)
..|.. .+.+++|+|++++|++++.||.|++||+++ .+.+..+..|...+.
T Consensus 143 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~ 222 (369)
T 3zwl_B 143 SINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSIS 222 (369)
T ss_dssp EEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEE
T ss_pred EEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCcee
Confidence 11112 788888999999999999999999999998 788888888999999
Q ss_pred EEEecCCCCEEEEecCCCcee----------------eceEEEEEccCCceEEEecCCC--------------cEEEEEc
Q psy7433 102 CLAIDPHEEFFVTGAGDGDIK----------------SPVKCLAIDPHEEFFVTGAGDG--------------DIKVWSL 151 (213)
Q Consensus 102 ~~~~~~~~~~l~~~~~~~~i~----------------~~v~~~~~~~~~~~l~~~~~dg--------------~i~v~d~ 151 (213)
+++|+|++++|++++.|+.++ ..+.+++|+|+++++++++.++ .+++||+
T Consensus 223 ~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~ 302 (369)
T 3zwl_B 223 DMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHK 302 (369)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEET
T ss_pred EEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEec
Confidence 999999999999999999886 6789999999999999999888 8999999
Q ss_pred cCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCc
Q psy7433 152 SGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~ 206 (213)
++++.+..+..|. ..|.+++|+|++ +|++++.||.|++|++.++.
T Consensus 303 ~~~~~~~~~~~~~----------~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~ 348 (369)
T 3zwl_B 303 IFEEEIGRVQGHF----------GPLNTVAISPQGTSYASGGEDGFIRLHHFEKSY 348 (369)
T ss_dssp TTCCEEEEEECCS----------SCEEEEEECTTSSEEEEEETTSEEEEEEECHHH
T ss_pred CCCcchhheeccc----------CcEEEEEECCCCCEEEEEcCCCeEEEEECcccc
Confidence 9999999998876 789999999965 69999999999999998653
No 77
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.98 E-value=2.5e-30 Score=191.96 Aligned_cols=200 Identities=15% Similarity=0.185 Sum_probs=148.7
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCC-EEEEEcCCCcEEE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQ-LLISAGKKGDICV 81 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~i 81 (213)
.++|.+.|++++|+|++++|+++ +.|+.|++|++...........+..|...|.+++|+|+++ +|++++.||.|++
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~---~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~ 83 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLIT---SWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILK 83 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEE---ETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred ccCCCCcEEEEEEcCCCCEEEEE---cCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEE
Confidence 46899999999999999999999 6899999999853332234556668999999999999999 9999999999999
Q ss_pred Eec-cCceEEEeccc--CCCCeeEEEecCCCCEEEEecCCCcee------------------------------------
Q psy7433 82 IDL-RQRVIRSRFNA--HESPVKCLAIDPHEEFFVTGAGDGDIK------------------------------------ 122 (213)
Q Consensus 82 wd~-~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------------------------ 122 (213)
||+ .+++. ..+.. |...|.+++|+| +..+++++.|+.++
T Consensus 84 wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 161 (342)
T 1yfq_A 84 VDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSS 161 (342)
T ss_dssp ECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSS
T ss_pred EEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCC
Confidence 999 77754 66777 999999999999 99999999987653
Q ss_pred --------------------------------eceEEEEEcc-CCceEEEecCCCcEEEEEccCC------eeeeeecCC
Q psy7433 123 --------------------------------SPVKCLAIDP-HEEFFVTGAGDGDIKVWSLSGN------HLLYNFPGE 163 (213)
Q Consensus 123 --------------------------------~~v~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~------~~~~~~~~~ 163 (213)
..+.+++|+| +++++++++.||.|++||++.. +....+..|
T Consensus 162 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~ 241 (342)
T 1yfq_A 162 RLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCH 241 (342)
T ss_dssp EEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECC
T ss_pred cEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecc
Confidence 1344455555 5555555555555555555443 333334333
Q ss_pred CCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCccc
Q psy7433 164 HARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 164 ~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
..... ...+...|.+++|+|++ +|++++.||.|++||+.+++.+
T Consensus 242 ~~~~~-~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~ 286 (342)
T 1yfq_A 242 RLNLK-DTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKI 286 (342)
T ss_dssp CCCTT-CCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEE
T ss_pred ccccc-ccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHh
Confidence 21000 00012389999999965 6999999999999999987543
No 78
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.6e-31 Score=204.86 Aligned_cols=201 Identities=15% Similarity=0.253 Sum_probs=162.9
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeee------------ecCCceEEE--EecCCCEE
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVC------------HDQGASSLV--FAPQHQLL 70 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~------------~~~~v~~~~--~~~~~~~l 70 (213)
+|.+.|.+++|+|++++|+++ +.|+.|++||++.....+....+.. +...+.++. +++++++|
T Consensus 109 ~h~~~v~~~~~~~~~~~l~s~---s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l 185 (437)
T 3gre_A 109 DCSSTVTQITMIPNFDAFAVS---SKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLL 185 (437)
T ss_dssp ECSSCEEEEEECTTSSEEEEE---ETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEE
T ss_pred cCCCCEEEEEEeCCCCEEEEE---eCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEE
Confidence 589999999999999999999 6899999999842223333333322 334566666 45789999
Q ss_pred EEEcCCCcEEEEeccCceEEEeccc--CCCCeeEEEecCCCCEEEEecCCCcee------------------eceEEEEE
Q psy7433 71 ISAGKKGDICVIDLRQRVIRSRFNA--HESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPVKCLAI 130 (213)
Q Consensus 71 ~~~~~d~~v~iwd~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v~~~~~ 130 (213)
++++.|+.|++||+++++.+..+.. |...|.+++|+|++++|++++.|+.++ ..|.+++|
T Consensus 186 ~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~ 265 (437)
T 3gre_A 186 VALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEV 265 (437)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEE
T ss_pred EEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEe
Confidence 9999999999999999999988887 789999999999999999999999886 57889966
Q ss_pred c----cCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeE--------------EE--ecCCCeEEEEeCCCCeEEE
Q psy7433 131 D----PHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSF--------------FK--HIGQGVTQLHVDGGSRLFS 190 (213)
Q Consensus 131 ~----~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~--------------~~--~~~~~v~~~~~~~~~~l~s 190 (213)
+ |++++|++++.||.|++||+++++.+..+..+...... +. .+...|.+++|+++.+|++
T Consensus 266 ~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s 345 (437)
T 3gre_A 266 CQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLT 345 (437)
T ss_dssp CTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEE
T ss_pred ccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceEEEe
Confidence 5 46779999999999999999999998888866422110 11 1456799999996667999
Q ss_pred EecCCcEEEEeCCCCccc
Q psy7433 191 CGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 191 ~~~d~~i~iw~~~~~~~~ 208 (213)
++.|+.|++||+.+++..
T Consensus 346 ~~~d~~i~~wd~~~~~~~ 363 (437)
T 3gre_A 346 DEATSSIVMFSLNELSSS 363 (437)
T ss_dssp EGGGTEEEEEETTCGGGC
T ss_pred cCCCCeEEEEECCCcccc
Confidence 999999999999987543
No 79
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.98 E-value=2.9e-30 Score=189.22 Aligned_cols=187 Identities=24% Similarity=0.339 Sum_probs=162.9
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
+|++|.+.|++++| |++++|+++ +.|+.|++||+ ........+..|...|.+++|+|++++|++++.|+.+++
T Consensus 13 ~l~~h~~~v~~~~~-~~~~~l~s~---~~dg~v~vw~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~ 85 (313)
T 3odt_A 13 TLKGHDQDVRDVVA-VDDSKVASV---SRDGTVRLWSK---DDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMING 85 (313)
T ss_dssp EECCCSSCEEEEEE-EETTEEEEE---ETTSEEEEEEE---SSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred HhhCCCCCcEEEEe-cCCCEEEEE---EcCCcEEEEEC---CCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEE
Confidence 57899999999999 999999999 68999999998 566677778889999999999999999999999999999
Q ss_pred EeccCc---eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee---------------eceEEEEEcc-CCceEEEecC
Q psy7433 82 IDLRQR---VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------SPVKCLAIDP-HEEFFVTGAG 142 (213)
Q Consensus 82 wd~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------~~v~~~~~~~-~~~~l~~~~~ 142 (213)
|++... +....+..|...+.+++| +++.+++++.|+.++ ..+.++.|+| +++++++++.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 163 (313)
T 3odt_A 86 VPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWKEGSLVYNLQAHNASVWDAKVVSFSENKFLTASA 163 (313)
T ss_dssp EETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTEEEEEEECCSSCEEEEEEEETTTTEEEEEET
T ss_pred EEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEcCCcEEEecccCCCceeEEEEccCCCCEEEEEEC
Confidence 998754 566777889999999999 577999999999886 7789999988 8999999999
Q ss_pred CCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCccc
Q psy7433 143 DGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 143 dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
||.|++|| ..+....+...+ ...+.+++|+|++.+++++.||.|++||+.+++.+
T Consensus 164 d~~i~i~d--~~~~~~~~~~~~---------~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~ 218 (313)
T 3odt_A 164 DKTIKLWQ--NDKVIKTFSGIH---------NDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVL 218 (313)
T ss_dssp TSCEEEEE--TTEEEEEECSSC---------SSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEE
T ss_pred CCCEEEEe--cCceEEEEeccC---------cccEEEEEEcCCCeEEEccCCCeEEEEECCchhhh
Confidence 99999999 445555665522 27899999999888999999999999999987543
No 80
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.98 E-value=2e-30 Score=197.33 Aligned_cols=190 Identities=14% Similarity=0.207 Sum_probs=163.8
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccc-------------------------------------
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQK------------------------------------- 44 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~------------------------------------- 44 (213)
.+.+|...|.+++|+|++++|+++ +.|+.|++||++....
T Consensus 144 ~~~~~~~~v~~~~~~~~~~~l~~~---~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (425)
T 1r5m_A 144 VLNFHRAPIVSVKWNKDGTHIISM---DVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKF 220 (425)
T ss_dssp EECCCCSCEEEEEECTTSSEEEEE---ETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEE
T ss_pred eccCCCccEEEEEECCCCCEEEEE---ecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEE
Confidence 467899999999999999999999 6899999999853211
Q ss_pred ----------------ccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCC
Q psy7433 45 ----------------KALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPH 108 (213)
Q Consensus 45 ----------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (213)
.+.+..+..|...+.+++|+|++++|++++.|+.|++||+++++.+..+..|...+.+++|+|+
T Consensus 221 ~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~ 300 (425)
T 1r5m_A 221 VIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGD 300 (425)
T ss_dssp EEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETT
T ss_pred EEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCC
Confidence 0122344567888999999999999999999999999999999888888889999999999999
Q ss_pred CCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCCcEEEEEccCCe----------------
Q psy7433 109 EEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNH---------------- 155 (213)
Q Consensus 109 ~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~---------------- 155 (213)
+ .+++++.++.++ ..+.+++|+|++++|++++.||.|++||+++++
T Consensus 301 ~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~ 379 (425)
T 1r5m_A 301 D-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNP 379 (425)
T ss_dssp T-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------C
T ss_pred C-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCc
Confidence 9 999999999886 689999999999999999999999999998777
Q ss_pred ----eeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCC
Q psy7433 156 ----LLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLP 203 (213)
Q Consensus 156 ----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~ 203 (213)
.+..+..+.. +..|.+++|+|++ +|++++.||.|++|+++
T Consensus 380 ~~~~~~~~~~~~~~--------~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 380 LPIPLYASYQSSQD--------NDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp EECCEEEEECCTTC--------CCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred ccchhhhhhcCccc--------CCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 6666666541 0189999999965 68899999999999986
No 81
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.98 E-value=1.5e-30 Score=196.27 Aligned_cols=195 Identities=14% Similarity=0.115 Sum_probs=161.1
Q ss_pred ccccCceEEEEEeC-CCCeEEEeeccCCCccEEEEeCCCcccccceeeeee---ecCCceEEEEecCCCEEEEEcCCCcE
Q psy7433 4 QCHNKITSDFVFLG-SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVC---HDQGASSLVFAPQHQLLISAGKKGDI 79 (213)
Q Consensus 4 ~~h~~~v~~~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~v 79 (213)
.+|...|.+++|+| ++++|+++ +.|+.|++||++ ...+..+.. +...|.+++|+|++++|++++.|+.|
T Consensus 115 ~~h~~~v~~~~~~~~~~~~l~s~---~~d~~i~iwd~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 187 (383)
T 3ei3_B 115 MGPGDAITGMKFNQFNTNQLFVS---SIRGATTLRDFS----GSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRL 187 (383)
T ss_dssp CSTTCBEEEEEEETTEEEEEEEE---ETTTEEEEEETT----SCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEE
T ss_pred CCcCCceeEEEeCCCCCCEEEEE---eCCCEEEEEECC----CCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCE
Confidence 47999999999999 78999999 689999999984 234444443 34789999999999999999999999
Q ss_pred EEEeccCceEEEecccCCCCeeEEEecCCCC-EEEEecCCCcee--------------------eceEEEEEcc-CCceE
Q psy7433 80 CVIDLRQRVIRSRFNAHESPVKCLAIDPHEE-FFVTGAGDGDIK--------------------SPVKCLAIDP-HEEFF 137 (213)
Q Consensus 80 ~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~~i~--------------------~~v~~~~~~~-~~~~l 137 (213)
++||+ +++.+..+..|...|.+++|+|+++ .+++++.|+.++ ..|.+++|+| ++++|
T Consensus 188 ~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l 266 (383)
T 3ei3_B 188 LLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKL 266 (383)
T ss_dssp EEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEE
T ss_pred EEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEE
Confidence 99999 5777888888999999999999998 999999999876 6789999999 99999
Q ss_pred EEecCCCcEEEEEccCCeeeeeecCCCCc-------eeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCcc
Q psy7433 138 VTGAGDGDIKVWSLSGNHLLYNFPGEHAR-------SSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 138 ~~~~~dg~i~v~d~~~~~~~~~~~~~~~~-------~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 207 (213)
++++.|+.|++||+++++....+..+... ..........+..++++|++.+ +++.|+.|++||+.+++.
T Consensus 267 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~-s~s~d~~i~iwd~~~~~~ 342 (383)
T 3ei3_B 267 LTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL-LLNDKRTIDIYDANSGGL 342 (383)
T ss_dssp EEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT-CTTCCCCEEEEETTTCCE
T ss_pred EEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc-ccCCCCeEEEEecCCCce
Confidence 99999999999999988776666543211 1111112245667888887777 889999999999988754
No 82
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.98 E-value=2.7e-30 Score=198.04 Aligned_cols=191 Identities=21% Similarity=0.399 Sum_probs=161.1
Q ss_pred ccccccCceEEEEEeCCCC-eEEEeeccCCCccEEEEeCCCcccc----cceeeeeeecCCceEEEEec-CCCEEEEEcC
Q psy7433 2 TYQCHNKITSDFVFLGSCS-LVATAGHSSESKNVCLWDSLLPQKK----ALVQAFVCHDQGASSLVFAP-QHQLLISAGK 75 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~-~l~~~g~~s~~~~i~iwd~~~~~~~----~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~ 75 (213)
++.+|...|.+++|+|++. +|+++ +.||.|++|+++..... .....+..|...|.+++|+| ++.+|++++.
T Consensus 176 ~~~~h~~~v~~l~~~~~~~~~l~s~---~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~ 252 (430)
T 2xyi_A 176 RLRGHQKEGYGLSWNPNLNGYLLSA---SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVAD 252 (430)
T ss_dssp EEECCSSCCCCEEECTTSTTEEEEE---CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEET
T ss_pred EecCCCCCeEEEEeCCCCCCeEEEE---eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeC
Confidence 4678999999999999988 89998 78999999999642211 12455668999999999999 6789999999
Q ss_pred CCcEEEEeccCc---eEEEecccCCCCeeEEEecCCCC-EEEEecCCCcee------------------eceEEEEEccC
Q psy7433 76 KGDICVIDLRQR---VIRSRFNAHESPVKCLAIDPHEE-FFVTGAGDGDIK------------------SPVKCLAIDPH 133 (213)
Q Consensus 76 d~~v~iwd~~~~---~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~~i~------------------~~v~~~~~~~~ 133 (213)
|+.|++||++++ +.+..+..|...+.+++|+|++. .+++++.|+.++ ..|.+++|+|+
T Consensus 253 dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~ 332 (430)
T 2xyi_A 253 DQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPH 332 (430)
T ss_dssp TSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSS
T ss_pred CCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCC
Confidence 999999999987 56677778999999999999887 688999999886 68999999999
Q ss_pred Cc-eEEEecCCCcEEEEEccC--------------CeeeeeecCCCCceeEEEecCCCeEEEEeCCCC--eEEEEecCCc
Q psy7433 134 EE-FFVTGAGDGDIKVWSLSG--------------NHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS--RLFSCGADGS 196 (213)
Q Consensus 134 ~~-~l~~~~~dg~i~v~d~~~--------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~d~~ 196 (213)
++ +|++++.|+.|++||++. .+.+..+.+|. ..|.+++|+|++ .|++++.||.
T Consensus 333 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~----------~~v~~~~~~p~~~~~l~s~s~dg~ 402 (430)
T 2xyi_A 333 NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT----------AKISDFSWNPNEPWIICSVSEDNI 402 (430)
T ss_dssp CTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCS----------SCEEEEEECSSSTTEEEEEETTSE
T ss_pred CCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCC----------CCceEEEECCCCCCEEEEEECCCC
Confidence 86 699999999999999976 24445555554 789999999964 5899999999
Q ss_pred EEEEeCCCC
Q psy7433 197 MKVRQLPDR 205 (213)
Q Consensus 197 i~iw~~~~~ 205 (213)
|++|++.+.
T Consensus 403 i~iw~~~~~ 411 (430)
T 2xyi_A 403 MQVWQMAEN 411 (430)
T ss_dssp EEEEEECHH
T ss_pred EEEeEcccc
Confidence 999998753
No 83
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.98 E-value=1.6e-30 Score=199.30 Aligned_cols=189 Identities=23% Similarity=0.366 Sum_probs=161.6
Q ss_pred cccccCceEEEEEeCC-CCeEEEeeccCCCccEEEEeCCCc-------ccccceeeeeeecCCceEEEEecCCC-EEEEE
Q psy7433 3 YQCHNKITSDFVFLGS-CSLVATAGHSSESKNVCLWDSLLP-------QKKALVQAFVCHDQGASSLVFAPQHQ-LLISA 73 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~-~~~l~~~g~~s~~~~i~iwd~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~ 73 (213)
+.+|.+.|++++|+|+ +.+||++ +.+|.|++||+... .....+..+.+|...+.+++|+|++. +|+++
T Consensus 124 ~~~h~~~v~~l~~~p~~~~~lat~---~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 200 (430)
T 2xyi_A 124 KINHEGEVNRARYMPQNACVIATK---TPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSA 200 (430)
T ss_dssp EEEESSCCSEEEEETTEEEEEEEE---CSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEE
T ss_pred EEcCCCcEEEEEECCCCCcEEEEE---CCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEE
Confidence 3578999999999997 6788888 78999999998421 11567778889999999999999888 99999
Q ss_pred cCCCcEEEEeccCce-------EEEecccCCCCeeEEEecC-CCCEEEEecCCCcee--------------------ece
Q psy7433 74 GKKGDICVIDLRQRV-------IRSRFNAHESPVKCLAIDP-HEEFFVTGAGDGDIK--------------------SPV 125 (213)
Q Consensus 74 ~~d~~v~iwd~~~~~-------~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~i~--------------------~~v 125 (213)
+.||.|++||+.++. ....+..|...|.+++|+| ++..|++++.++.++ ..|
T Consensus 201 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v 280 (430)
T 2xyi_A 201 SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEV 280 (430)
T ss_dssp CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCE
T ss_pred eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCe
Confidence 999999999998732 1355667899999999999 678999999999876 678
Q ss_pred EEEEEccCCc-eEEEecCCCcEEEEEccC-CeeeeeecCCCCceeEEEecCCCeEEEEeCCCC--eEEEEecCCcEEEEe
Q psy7433 126 KCLAIDPHEE-FFVTGAGDGDIKVWSLSG-NHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS--RLFSCGADGSMKVRQ 201 (213)
Q Consensus 126 ~~~~~~~~~~-~l~~~~~dg~i~v~d~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~d~~i~iw~ 201 (213)
++++|+|+++ ++++|+.||.|++||+++ ..++..+..|. ..|.+++|+|++ .|++++.|+.|++||
T Consensus 281 ~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~----------~~v~~i~~sp~~~~~l~s~~~d~~i~iwd 350 (430)
T 2xyi_A 281 NCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK----------DEIFQVQWSPHNETILASSGTDRRLHVWD 350 (430)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCS----------SCEEEEEECSSCTTEEEEEETTSCCEEEE
T ss_pred EEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCC----------CCEEEEEECCCCCCEEEEEeCCCcEEEEe
Confidence 9999999987 688999999999999987 55677777665 789999999965 489999999999999
Q ss_pred CCC
Q psy7433 202 LPD 204 (213)
Q Consensus 202 ~~~ 204 (213)
+..
T Consensus 351 ~~~ 353 (430)
T 2xyi_A 351 LSK 353 (430)
T ss_dssp GGG
T ss_pred CCC
Confidence 986
No 84
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.98 E-value=8.4e-30 Score=193.03 Aligned_cols=203 Identities=13% Similarity=0.218 Sum_probs=161.7
Q ss_pred ccccccCceEEEEEeC-CCCeEEEeeccCCCccEEEEeCCCcccccceeee----------eeecCCceEEEEec-CCCE
Q psy7433 2 TYQCHNKITSDFVFLG-SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAF----------VCHDQGASSLVFAP-QHQL 69 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~----------~~~~~~v~~~~~~~-~~~~ 69 (213)
.+++|.+.|++++|+| ++++|+++ +.|+.|++||++........... .+|...|.+++|+| ++++
T Consensus 38 ~~~~h~~~v~~~~~s~~~~~~l~~~---~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 114 (408)
T 4a11_B 38 VERIHGGGINTLDIEPVEGRYMLSG---GSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGM 114 (408)
T ss_dssp ECCCCSSCEEEEEECTTTCCEEEEE---ETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTC
T ss_pred eeeccCCcEEEEEEecCCCCEEEEE---cCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcE
Confidence 4678999999999999 99999999 68999999999533222221111 24889999999999 7789
Q ss_pred EEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCC---CEEEEecCCCcee-----------------eceEEEE
Q psy7433 70 LISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHE---EFFVTGAGDGDIK-----------------SPVKCLA 129 (213)
Q Consensus 70 l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~~~~~~~~i~-----------------~~v~~~~ 129 (213)
|++++.|+.|++||+++++....+. +...+.++.++|.+ ..+++++.++.+. ..|.+++
T Consensus 115 l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~ 193 (408)
T 4a11_B 115 FTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVS 193 (408)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEE
T ss_pred EEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEE
Confidence 9999999999999999998887776 67889999999844 4999999999876 6899999
Q ss_pred EccCCc-eEEEecCCCcEEEEEccCCe-eeeeecCCCCc-----eeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEe
Q psy7433 130 IDPHEE-FFVTGAGDGDIKVWSLSGNH-LLYNFPGEHAR-----SSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQ 201 (213)
Q Consensus 130 ~~~~~~-~l~~~~~dg~i~v~d~~~~~-~~~~~~~~~~~-----~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~ 201 (213)
|+|+++ ++++++.||.|++||++++. .+..+..+... ......+...|.+++|+|++ +|++++.||.|++||
T Consensus 194 ~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd 273 (408)
T 4a11_B 194 WSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWN 273 (408)
T ss_dssp ECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEE
Confidence 999998 58899999999999998765 34443221110 01112334789999999965 699999999999999
Q ss_pred CCCCccc
Q psy7433 202 LPDRDAV 208 (213)
Q Consensus 202 ~~~~~~~ 208 (213)
+.+++..
T Consensus 274 ~~~~~~~ 280 (408)
T 4a11_B 274 SSNGENT 280 (408)
T ss_dssp TTTCCBC
T ss_pred CCCCccc
Confidence 9987543
No 85
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.98 E-value=3.2e-30 Score=219.44 Aligned_cols=200 Identities=11% Similarity=0.192 Sum_probs=172.6
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
++.+|.+.|++++|+|++++++++ +.|+.|++||+ .+.+.+..+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 610 ~~~~h~~~v~~~~~s~~~~~l~s~---~~d~~i~vw~~---~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~v 683 (1249)
T 3sfz_A 610 VVRPHTDAVYHACFSQDGQRIASC---GADKTLQVFKA---ETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKI 683 (1249)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEE---ETTSCEEEEET---TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EEecccccEEEEEECCCCCEEEEE---eCCCeEEEEEC---CCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEE
Confidence 467899999999999999999999 68999999999 567788888999999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecC--CCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDP--HEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAG 142 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~ 142 (213)
||+.+++.+..+..|...+.+++|+| ++..+++++.|+.++ ..|.+++|+|+++++++++.
T Consensus 684 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~ 763 (1249)
T 3sfz_A 684 WDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSA 763 (1249)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEES
T ss_pred EECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEEC
Confidence 99999999999999999999999999 556899999999876 67999999999999999999
Q ss_pred CCcEEEEEccCCeeeeeecCCCC---------------------------------------------ceeEEEecCCCe
Q psy7433 143 DGDIKVWSLSGNHLLYNFPGEHA---------------------------------------------RSSFFKHIGQGV 177 (213)
Q Consensus 143 dg~i~v~d~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~v 177 (213)
||.|++||+++++....+..... .......+...|
T Consensus 764 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v 843 (1249)
T 3sfz_A 764 DGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTI 843 (1249)
T ss_dssp SSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCC
T ss_pred CCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCce
Confidence 99999999988776555432110 000111455789
Q ss_pred EEEEeCCCC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 178 TQLHVDGGS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 178 ~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
.+++|+|++ .+++++.|+.|++||+.++..
T Consensus 844 ~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~ 874 (1249)
T 3sfz_A 844 QYCDFSPYDHLAVIALSQYCVELWNIDSRLK 874 (1249)
T ss_dssp CEEEECSSTTEEEEECSSSCEEEEETTTTEE
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEEcCCCce
Confidence 999999965 689999999999999987654
No 86
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.98 E-value=8.8e-31 Score=198.18 Aligned_cols=199 Identities=14% Similarity=0.194 Sum_probs=162.2
Q ss_pred ccccccCceEEEEEeCC----C---CeEEEeeccCCCccEEEEeCCCcccccc-----eeeeeee-----cCCceEEEEe
Q psy7433 2 TYQCHNKITSDFVFLGS----C---SLVATAGHSSESKNVCLWDSLLPQKKAL-----VQAFVCH-----DQGASSLVFA 64 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~----~---~~l~~~g~~s~~~~i~iwd~~~~~~~~~-----~~~~~~~-----~~~v~~~~~~ 64 (213)
++.+|...|.+++|+|+ + ++|+++ +.|+.|++||+ ..... +..+..| ...|.+++|+
T Consensus 57 ~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~---~~dg~i~iw~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 130 (397)
T 1sq9_A 57 SHFVHKSGLHHVDVLQAIERDAFELCLVATT---SFSGDLLFYRI---TREDETKKVIFEKLDLLDSDMKKHSFWALKWG 130 (397)
T ss_dssp EEECCTTCEEEEEEEEEEETTTEEEEEEEEE---ETTSCEEEEEE---EECTTTCCEEEEEECCSCTTGGGSCEEEEEEE
T ss_pred EEecCCCcEEEEEEecccccCCccccEEEEE---cCCCCEEEEEc---cCCcccccccceeecccccccCCCcEEEEEEe
Confidence 46789999999999999 9 999999 68999999998 44444 6777778 5899999999
Q ss_pred ----cCCCE-EEEEcCCCcEEEEeccC------ceEEE-----ec-------ccCCCCeeEEEecCCCCEEEEecCCCce
Q psy7433 65 ----PQHQL-LISAGKKGDICVIDLRQ------RVIRS-----RF-------NAHESPVKCLAIDPHEEFFVTGAGDGDI 121 (213)
Q Consensus 65 ----~~~~~-l~~~~~d~~v~iwd~~~------~~~~~-----~~-------~~~~~~i~~~~~~~~~~~l~~~~~~~~i 121 (213)
|++++ |++++.||.|++||+++ ++.+. .+ ..+...+.+++|+|++ .+++++.++.+
T Consensus 131 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i 209 (397)
T 1sq9_A 131 ASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTV 209 (397)
T ss_dssp CCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEE
T ss_pred eccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcE
Confidence 99999 99999999999999998 65544 55 4478899999999999 99999999987
Q ss_pred e--------------e---------ceEEEEEccCCceEEEecCC---CcEEEEEccCCeeeeeecCCCCceeEE---Ee
Q psy7433 122 K--------------S---------PVKCLAIDPHEEFFVTGAGD---GDIKVWSLSGNHLLYNFPGEHARSSFF---KH 172 (213)
Q Consensus 122 ~--------------~---------~v~~~~~~~~~~~l~~~~~d---g~i~v~d~~~~~~~~~~~~~~~~~~~~---~~ 172 (213)
+ . .+.+++|+|++++|++++.| +.|++||+++++.+..+.......... ..
T Consensus 210 ~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (397)
T 1sq9_A 210 QISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFA 289 (397)
T ss_dssp EEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBS
T ss_pred EEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccc
Confidence 5 3 37899999999999999999 999999999999888887611000000 00
Q ss_pred cCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 173 IGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 173 ~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
+...|.+++|+|++ +|++++.||.|++||+.+.+.
T Consensus 290 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 325 (397)
T 1sq9_A 290 HSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKER 325 (397)
T ss_dssp BSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE
T ss_pred cCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCce
Confidence 23789999999864 699999999999999988754
No 87
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.98 E-value=7.6e-31 Score=195.61 Aligned_cols=186 Identities=17% Similarity=0.202 Sum_probs=158.4
Q ss_pred cccCceEEEEEeCC---CCeEEEeeccCCCccEEEEeCCCccccc-ceeeeeeecCCceEEEE------ecCCCEEEEEc
Q psy7433 5 CHNKITSDFVFLGS---CSLVATAGHSSESKNVCLWDSLLPQKKA-LVQAFVCHDQGASSLVF------APQHQLLISAG 74 (213)
Q Consensus 5 ~h~~~v~~~~~~~~---~~~l~~~g~~s~~~~i~iwd~~~~~~~~-~~~~~~~~~~~v~~~~~------~~~~~~l~~~~ 74 (213)
+|..+|.+++|+|+ +++|+++ +.|+.|++||++ ... .+..+.+|...|.+++| +|++++|++++
T Consensus 63 ~~~~~v~~~~~~~~~~~~~~l~~~---~~dg~i~iwd~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~ 136 (357)
T 3i2n_A 63 EKAKPIKCGTFGATSLQQRYLATG---DFGGNLHIWNLE---APEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGS 136 (357)
T ss_dssp EESSCEEEEECTTCCTTTCCEEEE---ETTSCEEEECTT---SCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEE
T ss_pred cccCcEEEEEEcCCCCCCceEEEe---cCCCeEEEEeCC---CCCccEEEEEecccceEEEeeccccccCCCccEEEEEe
Confidence 68999999999998 6999999 689999999994 344 67788899999999965 67899999999
Q ss_pred CCCcEEEEeccCce-EEEecccCCC----CeeEEE----ecCCCCEEEEecCCCcee----------------eceEEEE
Q psy7433 75 KKGDICVIDLRQRV-IRSRFNAHES----PVKCLA----IDPHEEFFVTGAGDGDIK----------------SPVKCLA 129 (213)
Q Consensus 75 ~d~~v~iwd~~~~~-~~~~~~~~~~----~i~~~~----~~~~~~~l~~~~~~~~i~----------------~~v~~~~ 129 (213)
.|+.|++||+++++ .+..+..+.. .+.+++ |+|+++.+++++.++.++ ..+.+++
T Consensus 137 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~ 216 (357)
T 3i2n_A 137 RDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLE 216 (357)
T ss_dssp TTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEE
T ss_pred CCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEE
Confidence 99999999999876 6666655444 788888 788999999999999886 7899999
Q ss_pred Ecc---CCceEEEecCCCcEEEEEccCCeeeeeec-----CCCCceeEEEecCCCeEEEEeCCCC--eEEEEecCCcEEE
Q psy7433 130 IDP---HEEFFVTGAGDGDIKVWSLSGNHLLYNFP-----GEHARSSFFKHIGQGVTQLHVDGGS--RLFSCGADGSMKV 199 (213)
Q Consensus 130 ~~~---~~~~l~~~~~dg~i~v~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~d~~i~i 199 (213)
|+| +++++++++.||.|++||+++++....+. .|. ..|.+++|+|++ .|++++.||.|++
T Consensus 217 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~----------~~v~~~~~~~~~~~~l~~~~~dg~i~i 286 (357)
T 3i2n_A 217 FDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHK----------STVWQVRHLPQNRELFLTAGGAGGLHL 286 (357)
T ss_dssp ESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCS----------SCEEEEEEETTEEEEEEEEETTSEEEE
T ss_pred cCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCc----------CCEEEEEECCCCCcEEEEEeCCCcEEE
Confidence 999 89999999999999999998876655544 444 789999999965 5899999999999
Q ss_pred EeCCCCc
Q psy7433 200 RQLPDRD 206 (213)
Q Consensus 200 w~~~~~~ 206 (213)
||+....
T Consensus 287 wd~~~~~ 293 (357)
T 3i2n_A 287 WKYEYPI 293 (357)
T ss_dssp EEEECCS
T ss_pred eecCCCc
Confidence 9998654
No 88
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.98 E-value=3.4e-30 Score=204.73 Aligned_cols=188 Identities=13% Similarity=0.167 Sum_probs=167.1
Q ss_pred ccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccc----cceeeeeeecCC-ceEEEEec--CCCEEEEEcCC
Q psy7433 4 QCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKK----ALVQAFVCHDQG-ASSLVFAP--QHQLLISAGKK 76 (213)
Q Consensus 4 ~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~----~~~~~~~~~~~~-v~~~~~~~--~~~~l~~~~~d 76 (213)
..|.+.|.+++|+|++++|+++ + ++.|++||+. +. +....+.+|... |.+++|+| ++++|++++.|
T Consensus 15 ~~~~~~v~~~~~spdg~~l~~~---~-~~~v~v~~~~---~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~d 87 (615)
T 1pgu_A 15 STQRNFTTHLSYDPTTNAIAYP---C-GKSAFVRCLD---DGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDES 87 (615)
T ss_dssp CCCTTCCCCCEEETTTTEEEEE---E-TTEEEEEECC---SSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETT
T ss_pred CCccCceeEEEECCCCCEEEEe---c-CCeEEEEECC---CCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCC
Confidence 3588999999999999999999 3 7899999994 44 678888899999 99999999 99999999999
Q ss_pred CcEEEEeccCc--------eEEEecccCCCCeeEEEecCCCCEEEEecCC----Ccee---------------eceEEEE
Q psy7433 77 GDICVIDLRQR--------VIRSRFNAHESPVKCLAIDPHEEFFVTGAGD----GDIK---------------SPVKCLA 129 (213)
Q Consensus 77 ~~v~iwd~~~~--------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~----~~i~---------------~~v~~~~ 129 (213)
|.|++||+.++ +....+..|..++.+++|+|+++++++++.+ +.+. ..|.+++
T Consensus 88 g~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~ 167 (615)
T 1pgu_A 88 GKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACH 167 (615)
T ss_dssp SEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEE
T ss_pred CEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCCcceeeecCCccEEEEE
Confidence 99999999754 6777788899999999999999999999987 3333 6799999
Q ss_pred EccCCc-eEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCC---CeEEEEeCCC-C-eEEEEecCCcEEEEeCC
Q psy7433 130 IDPHEE-FFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQ---GVTQLHVDGG-S-RLFSCGADGSMKVRQLP 203 (213)
Q Consensus 130 ~~~~~~-~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~-~-~l~s~~~d~~i~iw~~~ 203 (213)
|+|+++ ++++++.|+.|++||+++++.+..+..|. . .|.+++|+|+ + +|++++.|+.|++||+.
T Consensus 168 ~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 237 (615)
T 1pgu_A 168 LKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHH----------KQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGK 237 (615)
T ss_dssp ECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSS----------CTTCCEEEEEECSTTCCEEEEEETTCCEEEEETT
T ss_pred ECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccC----------CCCceEEEEEECCCCCCEEEEEeCCCeEEEEECC
Confidence 999998 89999999999999999999999998875 5 7999999987 5 58999999999999998
Q ss_pred CCccc
Q psy7433 204 DRDAV 208 (213)
Q Consensus 204 ~~~~~ 208 (213)
+++.+
T Consensus 238 ~~~~~ 242 (615)
T 1pgu_A 238 SGEFL 242 (615)
T ss_dssp TCCEE
T ss_pred CCCEe
Confidence 87543
No 89
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.2e-30 Score=198.45 Aligned_cols=191 Identities=16% Similarity=0.271 Sum_probs=162.3
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccc-ccceeeeeeecCCceEEEEecC-CCEEEEEcCCCcEEEE
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQK-KALVQAFVCHDQGASSLVFAPQ-HQLLISAGKKGDICVI 82 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~-~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~v~iw 82 (213)
.|...|.+++|+|++++|+++ +.|+.|++||+..... ...+..+..|...|.+++|+|+ +++|++++.|+.|++|
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~---~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iw 141 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGA---LDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIW 141 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEE---ESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBC
T ss_pred ecCCceEEEEECCCCCeEEEE---ccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEE
Confidence 588899999999999999999 6899999999953212 3477778889999999999998 8999999999999999
Q ss_pred eccCce------EEEe---cccCCCCeeEEEecCC-CCEEEEecCCCcee-----------------------eceEEEE
Q psy7433 83 DLRQRV------IRSR---FNAHESPVKCLAIDPH-EEFFVTGAGDGDIK-----------------------SPVKCLA 129 (213)
Q Consensus 83 d~~~~~------~~~~---~~~~~~~i~~~~~~~~-~~~l~~~~~~~~i~-----------------------~~v~~~~ 129 (213)
|+++++ .... ...|...+.+++|+|+ +..+++++.|+.++ ..+.+++
T Consensus 142 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~ 221 (416)
T 2pm9_A 142 DMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVE 221 (416)
T ss_dssp BTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEE
T ss_pred ECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEE
Confidence 998876 3322 3568889999999998 78999999999876 2489999
Q ss_pred EccCC-ceEEEecCCC---cEEEEEccCC-eeeeeec-CCCCceeEEEecCCCeEEEEeCC-CC-eEEEEecCCcEEEEe
Q psy7433 130 IDPHE-EFFVTGAGDG---DIKVWSLSGN-HLLYNFP-GEHARSSFFKHIGQGVTQLHVDG-GS-RLFSCGADGSMKVRQ 201 (213)
Q Consensus 130 ~~~~~-~~l~~~~~dg---~i~v~d~~~~-~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~-~~-~l~s~~~d~~i~iw~ 201 (213)
|+|++ .++++++.|+ .|++||++++ .+...+. .|. ..|.+++|+| ++ +|++++.|+.|++||
T Consensus 222 ~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~----------~~v~~~~~s~~~~~~l~s~~~dg~v~~wd 291 (416)
T 2pm9_A 222 WHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQ----------KGILSLDWCHQDEHLLLSSGRDNTVLLWN 291 (416)
T ss_dssp ECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCS----------SCEEEEEECSSCSSCEEEEESSSEEEEEC
T ss_pred ECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCcc----------CceeEEEeCCCCCCeEEEEeCCCCEEEee
Confidence 99997 5899999998 9999999886 5666666 555 7899999998 54 699999999999999
Q ss_pred CCCCccc
Q psy7433 202 LPDRDAV 208 (213)
Q Consensus 202 ~~~~~~~ 208 (213)
+.+++.+
T Consensus 292 ~~~~~~~ 298 (416)
T 2pm9_A 292 PESAEQL 298 (416)
T ss_dssp SSSCCEE
T ss_pred CCCCccc
Confidence 9887543
No 90
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.98 E-value=1.2e-30 Score=200.24 Aligned_cols=196 Identities=12% Similarity=0.157 Sum_probs=153.9
Q ss_pred CceEEEEEeCCC--CeEEEeeccCCCccEEEEeCCCcccc------------------------------------ccee
Q psy7433 8 KITSDFVFLGSC--SLVATAGHSSESKNVCLWDSLLPQKK------------------------------------ALVQ 49 (213)
Q Consensus 8 ~~v~~~~~~~~~--~~l~~~g~~s~~~~i~iwd~~~~~~~------------------------------------~~~~ 49 (213)
+.|.+++|+|++ .+|+++ +.|+.|++||+...... ...+
T Consensus 94 ~~V~~l~~~~~~~~~~l~s~---s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (447)
T 3dw8_B 94 EKINKIRWLPQKNAAQFLLS---TNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRR 170 (447)
T ss_dssp CCCCEEEECCCCSSSEEEEE---ECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEE
T ss_pred CceEEEEEcCCCCcceEEEe---CCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceE
Confidence 889999999998 789998 68999999998421110 0011
Q ss_pred e-eeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCc-eEEE-------ecccCCCCeeEEEecCCC-CEEEEecCCC
Q psy7433 50 A-FVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR-VIRS-------RFNAHESPVKCLAIDPHE-EFFVTGAGDG 119 (213)
Q Consensus 50 ~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~-~~~~-------~~~~~~~~i~~~~~~~~~-~~l~~~~~~~ 119 (213)
. ..+|...|.+++|+|++++|+++ .|+.|++||+++. +... .+..|...|.+++|+|++ +.|++++.|+
T Consensus 171 ~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg 249 (447)
T 3dw8_B 171 IFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKG 249 (447)
T ss_dssp EECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTS
T ss_pred EeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCC
Confidence 2 35688999999999999999999 7999999999844 4443 356789999999999998 9999999999
Q ss_pred cee---------------------e------------ceEEEEEccCCceEEEecCCCcEEEEEccC-CeeeeeecCCCC
Q psy7433 120 DIK---------------------S------------PVKCLAIDPHEEFFVTGAGDGDIKVWSLSG-NHLLYNFPGEHA 165 (213)
Q Consensus 120 ~i~---------------------~------------~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~-~~~~~~~~~~~~ 165 (213)
.++ . .|.+++|+|++++|++++. +.|++||+++ ++++..+..|..
T Consensus 250 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~ 328 (447)
T 3dw8_B 250 TIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEY 328 (447)
T ss_dssp CEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGG
T ss_pred eEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccc
Confidence 876 1 7999999999999999999 9999999987 888888877642
Q ss_pred ceeEE--EecC---CCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCccc
Q psy7433 166 RSSFF--KHIG---QGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 166 ~~~~~--~~~~---~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
..... .... ..+..++|+|++ +|++++.||.|++||+.+++.+
T Consensus 329 ~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 329 LRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI 377 (447)
T ss_dssp GTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEE
T ss_pred ccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcce
Confidence 10000 0000 013458999965 5999999999999999987543
No 91
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=1.7e-29 Score=191.35 Aligned_cols=198 Identities=15% Similarity=0.230 Sum_probs=161.5
Q ss_pred ccccCceEEEEEeC-CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecC---CCEEEEEcCCCcE
Q psy7433 4 QCHNKITSDFVFLG-SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQ---HQLLISAGKKGDI 79 (213)
Q Consensus 4 ~~h~~~v~~~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~v 79 (213)
.+|...|.+++|+| ++.+|+++ +.|+.|++||+ ...+.+..+. +...+.++.|+|. +.++++++.|+.|
T Consensus 96 ~~~~~~v~~~~~~~~~~~~l~s~---~~d~~i~iwd~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 168 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDTGMFTSS---SFDKTLKVWDT---NTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKV 168 (408)
T ss_dssp TCCSSCEEEEEECTTCTTCEEEE---ETTSEEEEEET---TTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSE
T ss_pred ccCCCcEEEEEEccCCCcEEEEE---eCCCeEEEeeC---CCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeE
Confidence 46999999999999 77899998 68999999999 4455555554 6788999999984 4599999999999
Q ss_pred EEEeccCceEEEecccCCCCeeEEEecCCCC-EEEEecCCCcee---------------------------------ece
Q psy7433 80 CVIDLRQRVIRSRFNAHESPVKCLAIDPHEE-FFVTGAGDGDIK---------------------------------SPV 125 (213)
Q Consensus 80 ~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~~i~---------------------------------~~v 125 (213)
++||+++++.+..+..|...|.+++|+|+++ .+++++.|+.++ ..|
T Consensus 169 ~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 248 (408)
T 4a11_B 169 QLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKV 248 (408)
T ss_dssp EEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCE
T ss_pred EEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCce
Confidence 9999999998899999999999999999998 588999999876 458
Q ss_pred EEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCC-------------------------------------CCcee
Q psy7433 126 KCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGE-------------------------------------HARSS 168 (213)
Q Consensus 126 ~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~-------------------------------------~~~~~ 168 (213)
.+++|+|++++|++++.||.|++||+++++.......+ .....
T Consensus 249 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~ 328 (408)
T 4a11_B 249 NGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQIT 328 (408)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEE
T ss_pred eEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCccee
Confidence 99999999999999999999999999876544332211 01112
Q ss_pred EEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCccc
Q psy7433 169 FFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 169 ~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
.+..+...|++++|+|++ +|++++.||.|++||+.+.+.+
T Consensus 329 ~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~ 369 (408)
T 4a11_B 329 MLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPV 369 (408)
T ss_dssp EECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC----
T ss_pred eeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCcc
Confidence 234466899999999964 6999999999999999987654
No 92
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=2.6e-30 Score=188.61 Aligned_cols=185 Identities=13% Similarity=0.139 Sum_probs=139.6
Q ss_pred cCceEEEEEeCC----CCeEEEeec-----------------cCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec
Q psy7433 7 NKITSDFVFLGS----CSLVATAGH-----------------SSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP 65 (213)
Q Consensus 7 ~~~v~~~~~~~~----~~~l~~~g~-----------------~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 65 (213)
.+.|++++++|+ +..++++|. ...|+.|++|++. ..++.+..+..|...++.++|++
T Consensus 111 ~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s--~dG~~~~s~~~~~~~v~~l~fs~ 188 (356)
T 2w18_A 111 IREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFA--EDGGGKENQFLMPPEETILTFAE 188 (356)
T ss_dssp EEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEEC--TTSCEEEEEEECCCSSCEEEEEE
T ss_pred ccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEEC--CCCceeeeeccCCCceeeEEeec
Confidence 346788888888 777777542 1248999999984 34667778889999999999999
Q ss_pred ---CCCEEEEEcCCCcEEEEeccCceEEEecccCC---CCeeEEEecCCCCEEE------------EecCCCcee-----
Q psy7433 66 ---QHQLLISAGKKGDICVIDLRQRVIRSRFNAHE---SPVKCLAIDPHEEFFV------------TGAGDGDIK----- 122 (213)
Q Consensus 66 ---~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~---~~i~~~~~~~~~~~l~------------~~~~~~~i~----- 122 (213)
++.+|++++.|++|++||+++++.++.+.++. ..+.+++|+|++.+++ +|+.|++++
T Consensus 189 ~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~ 268 (356)
T 2w18_A 189 VQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPK 268 (356)
T ss_dssp EETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETT
T ss_pred cCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECC
Confidence 77999999999999999999999999997644 3577789999998874 455666665
Q ss_pred --eceEEEEEc-cCCc------------eEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-
Q psy7433 123 --SPVKCLAID-PHEE------------FFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS- 186 (213)
Q Consensus 123 --~~v~~~~~~-~~~~------------~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~- 186 (213)
..+..+.+. |+|+ ++++++.|++|+|||+++++++.++.+|.. ..+..++|+|++
T Consensus 269 tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~---------~vvs~vafSPDG~ 339 (356)
T 2w18_A 269 TTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSD---------QHWSFVKWSGTDS 339 (356)
T ss_dssp TTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC-----------CCCCEEEECSSSS
T ss_pred CCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCC---------CeEEEEEECCCCC
Confidence 111112221 4443 578999999999999999999999988762 234568999975
Q ss_pred eEEEEecCCcEEEEeC
Q psy7433 187 RLFSCGADGSMKVRQL 202 (213)
Q Consensus 187 ~l~s~~~d~~i~iw~~ 202 (213)
+|++|+.|++|+|||+
T Consensus 340 ~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 340 HLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEEECTTSCEEEEEE
T ss_pred EEEEEECCCcEEEecC
Confidence 5999999999999996
No 93
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.6e-31 Score=206.14 Aligned_cols=198 Identities=12% Similarity=0.158 Sum_probs=153.5
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEE--EEecCC-CEEEEEcCCCc
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSL--VFAPQH-QLLISAGKKGD 78 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~d~~ 78 (213)
++.+|...|++++|+|++ .|+++ +.||+|++||++.+ ......+.+|...|.++ +|+|++ ++|++++.|++
T Consensus 261 ~l~~h~~~v~sv~~s~~~-~lasg---s~DgtV~lWD~~~~--~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~t 334 (524)
T 2j04_B 261 TLSLADSLITTFDFLSPT-TVVCG---FKNGFVAEFDLTDP--EVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGY 334 (524)
T ss_dssp EECCTTTCEEEEEESSSS-EEEEE---ETTSEEEEEETTBC--SSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSE
T ss_pred EEEcCCCCEEEEEecCCC-eEEEE---eCCCEEEEEECCCC--CCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCe
Confidence 467899999999999864 78888 79999999999422 23455678899999999 567887 89999999999
Q ss_pred EEEEeccCceEEEecccCC--CCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEE
Q psy7433 79 ICVIDLRQRVIRSRFNAHE--SPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVT 139 (213)
Q Consensus 79 v~iwd~~~~~~~~~~~~~~--~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~ 139 (213)
|++||+++++....+.+|. ..+.+++|+|++..+++++.|+.++ ..|.+++|+|++++|++
T Consensus 335 vklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~S 414 (524)
T 2j04_B 335 FYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLA 414 (524)
T ss_dssp EEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEE
T ss_pred EEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEE
Confidence 9999999887655555543 3578999999999999999998776 57999999999999999
Q ss_pred ecCCCcEEEEEccCC-----e---------eeeeecCCC--------------------CceeEEEecCCCeEEEEeCCC
Q psy7433 140 GAGDGDIKVWSLSGN-----H---------LLYNFPGEH--------------------ARSSFFKHIGQGVTQLHVDGG 185 (213)
Q Consensus 140 ~~~dg~i~v~d~~~~-----~---------~~~~~~~~~--------------------~~~~~~~~~~~~v~~~~~~~~ 185 (213)
|+.||+|++||+... + .+..+.... ........+...|.+++|+|+
T Consensus 415 gs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~ 494 (524)
T 2j04_B 415 GSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNET 494 (524)
T ss_dssp EETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCS
T ss_pred EECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCC
Confidence 999999999997421 0 111111100 011123456789999999996
Q ss_pred C----eEEEEecCCcEEEEeCCCC
Q psy7433 186 S----RLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 186 ~----~l~s~~~d~~i~iw~~~~~ 205 (213)
+ .+++|+.||.|+||++...
T Consensus 495 ~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 495 SAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp TTTTTEEEEECTTSEEEEEECSCC
T ss_pred CCccHHHHhhccCceEEEEEcccc
Confidence 4 5899999999999999764
No 94
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=1.3e-29 Score=201.36 Aligned_cols=191 Identities=16% Similarity=0.242 Sum_probs=167.0
Q ss_pred ccccccCc-eEEEEEeC--CCCeEEEeeccCCCccEEEEeCCCcc-----cccceeeeeeecCCceEEEEecCCCEEEEE
Q psy7433 2 TYQCHNKI-TSDFVFLG--SCSLVATAGHSSESKNVCLWDSLLPQ-----KKALVQAFVCHDQGASSLVFAPQHQLLISA 73 (213)
Q Consensus 2 ~l~~h~~~-v~~~~~~~--~~~~l~~~g~~s~~~~i~iwd~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 73 (213)
.+.+|.+. |.+++|+| ++++|+++ +.|+.|++||+.... ....+..+..|...|.+++|+|++++|+++
T Consensus 58 ~~~~h~~~~v~~~~~sp~~~~~~l~s~---~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 134 (615)
T 1pgu_A 58 QFTGHGSSVVTTVKFSPIKGSQYLCSG---DESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVV 134 (615)
T ss_dssp EECTTTTSCEEEEEECSSTTCCEEEEE---ETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred EEecCCCceEEEEEECcCCCCCEEEEe---cCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEe
Confidence 46789999 99999999 99999999 689999999983210 346667788899999999999999999999
Q ss_pred cCC----CcEEEEeccCceEEEecccCCCCeeEEEecCCCC-EEEEecCCCcee-----------------e---ceEEE
Q psy7433 74 GKK----GDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEE-FFVTGAGDGDIK-----------------S---PVKCL 128 (213)
Q Consensus 74 ~~d----~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~~i~-----------------~---~v~~~ 128 (213)
+.+ +.|.+|| .++.+..+..|...|.+++|+|+++ .+++++.|+.++ . .|.++
T Consensus 135 ~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~ 212 (615)
T 1pgu_A 135 GEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDV 212 (615)
T ss_dssp ECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEE
T ss_pred ccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEE
Confidence 887 6888888 5677888899999999999999998 899999999876 4 79999
Q ss_pred EEccC-CceEEEecCCCcEEEEEccCCeeeeee-c---CCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCC
Q psy7433 129 AIDPH-EEFFVTGAGDGDIKVWSLSGNHLLYNF-P---GEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLP 203 (213)
Q Consensus 129 ~~~~~-~~~l~~~~~dg~i~v~d~~~~~~~~~~-~---~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~ 203 (213)
+|+|+ +++|++++.||.|++||+++++.+..+ . .|. ..|.+++|+.+.+|++++.|+.|++||+.
T Consensus 213 ~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~----------~~v~~~~~~~~~~l~~~~~d~~i~~wd~~ 282 (615)
T 1pgu_A 213 EFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQ----------GGIFALSWLDSQKFATVGADATIRVWDVT 282 (615)
T ss_dssp EECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCC----------SCEEEEEESSSSEEEEEETTSEEEEEETT
T ss_pred EECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccC----------CceEEEEEcCCCEEEEEcCCCcEEEEECC
Confidence 99999 999999999999999999999998888 4 554 78999999933469999999999999999
Q ss_pred CCcc
Q psy7433 204 DRDA 207 (213)
Q Consensus 204 ~~~~ 207 (213)
+++.
T Consensus 283 ~~~~ 286 (615)
T 1pgu_A 283 TSKC 286 (615)
T ss_dssp TTEE
T ss_pred CCcE
Confidence 7654
No 95
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.2e-29 Score=195.42 Aligned_cols=187 Identities=13% Similarity=0.131 Sum_probs=154.0
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee----------------------------------
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV---------------------------------- 52 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~---------------------------------- 52 (213)
..++.+++|+|+|++|+++ .++.|++||+.++.....+..+.
T Consensus 4 ~~p~~~v~~s~dg~~l~~~----~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI----IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSN 79 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE----ETTEEEEEEEETTTEEEEEEEEECCC-------------------------------
T ss_pred cccEEEEEecCCCCEEEEE----eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccC
Confidence 4688999999999987776 57899999984333111333333
Q ss_pred --------------------eecCCceEEEEecCCCEE-EEEcCCCcEEEEecc--CceEEEecc--cCCCCeeEEEecC
Q psy7433 53 --------------------CHDQGASSLVFAPQHQLL-ISAGKKGDICVIDLR--QRVIRSRFN--AHESPVKCLAIDP 107 (213)
Q Consensus 53 --------------------~~~~~v~~~~~~~~~~~l-~~~~~d~~v~iwd~~--~~~~~~~~~--~~~~~i~~~~~~~ 107 (213)
.|...|.+++|+|++++| ++++.||.|++||+. +++.+..+. .+...+.+++|+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp 159 (450)
T 2vdu_B 80 KGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAE 159 (450)
T ss_dssp --------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECT
T ss_pred cCccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcC
Confidence 233369999999999996 899999999999999 787777775 5678899999999
Q ss_pred CCCEEEEecCCCcee---------------------eceEEEEEccC---CceEEEecCCCcEEEEEccCCeeeee-ecC
Q psy7433 108 HEEFFVTGAGDGDIK---------------------SPVKCLAIDPH---EEFFVTGAGDGDIKVWSLSGNHLLYN-FPG 162 (213)
Q Consensus 108 ~~~~l~~~~~~~~i~---------------------~~v~~~~~~~~---~~~l~~~~~dg~i~v~d~~~~~~~~~-~~~ 162 (213)
++++|++++.++.+. ..|.+++|+|+ +++|++++.|+.|++||+++++.+.. +.+
T Consensus 160 ~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~ 239 (450)
T 2vdu_B 160 DDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFG 239 (450)
T ss_dssp TSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCC
T ss_pred CCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecC
Confidence 999999999988764 56899999999 99999999999999999998887776 445
Q ss_pred CCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCcc
Q psy7433 163 EHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 163 ~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 207 (213)
|. ..|.+++|+.+.+|++++.|+.|++||+.+++.
T Consensus 240 h~----------~~v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~~ 274 (450)
T 2vdu_B 240 HK----------HFVSSICCGKDYLLLSAGGDDKIFAWDWKTGKN 274 (450)
T ss_dssp CS----------SCEEEEEECSTTEEEEEESSSEEEEEETTTCCE
T ss_pred CC----------CceEEEEECCCCEEEEEeCCCeEEEEECCCCcE
Confidence 54 789999999334699999999999999998754
No 96
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.97 E-value=1.5e-29 Score=192.20 Aligned_cols=182 Identities=18% Similarity=0.261 Sum_probs=159.2
Q ss_pred ccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEecc
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLR 85 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~ 85 (213)
|...|.+++|+|++++|+++ +.||.|++||+ ...+.+..+..|...|.+++| ++++|++++.||.|++||++
T Consensus 133 ~~~~v~~v~~s~~~~~l~~~---~~dg~i~iwd~---~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~ 204 (401)
T 4aez_A 133 ESTYVASVKWSHDGSFLSVG---LGNGLVDIYDV---ESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVR 204 (401)
T ss_dssp TTCCEEEEEECTTSSEEEEE---ETTSCEEEEET---TTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETT
T ss_pred CCCCEEEEEECCCCCEEEEE---CCCCeEEEEEC---cCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecc
Confidence 78899999999999999999 68999999999 566778888899999999999 45799999999999999998
Q ss_pred -CceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCc-eEEEec--CCC
Q psy7433 86 -QRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEE-FFVTGA--GDG 144 (213)
Q Consensus 86 -~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~-~l~~~~--~dg 144 (213)
.......+..|...|.+++|+|++++|++++.|+.++ ..|.+++|+|++. ++++++ .|+
T Consensus 205 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~ 284 (401)
T 4aez_A 205 IANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDK 284 (401)
T ss_dssp SSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTC
T ss_pred cCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCC
Confidence 4567778888999999999999999999999999886 6789999999876 556654 799
Q ss_pred cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEE--EecCCcEEEEeCCCCc
Q psy7433 145 DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFS--CGADGSMKVRQLPDRD 206 (213)
Q Consensus 145 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s--~~~d~~i~iw~~~~~~ 206 (213)
.|++||+++++.+..+..+ ..|.+++|+|++ .+++ |+.||.|++||+.++.
T Consensus 285 ~i~i~d~~~~~~~~~~~~~-----------~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~ 338 (401)
T 4aez_A 285 QIHFWNAATGARVNTVDAG-----------SQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSG 338 (401)
T ss_dssp EEEEEETTTCCEEEEEECS-----------SCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTE
T ss_pred EEEEEECCCCCEEEEEeCC-----------CcEEEEEECCCCCeEEEEeecCCCcEEEEecCCcc
Confidence 9999999999888888643 579999999965 4666 4489999999998753
No 97
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.8e-29 Score=194.42 Aligned_cols=194 Identities=16% Similarity=0.190 Sum_probs=158.5
Q ss_pred ccccCceEEEEEeCCCCeE-EEeeccCCCccEEEEeCCCcccccceeeee--eecCCceEEEEecCCCEEEEEcCCCcEE
Q psy7433 4 QCHNKITSDFVFLGSCSLV-ATAGHSSESKNVCLWDSLLPQKKALVQAFV--CHDQGASSLVFAPQHQLLISAGKKGDIC 80 (213)
Q Consensus 4 ~~h~~~v~~~~~~~~~~~l-~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 80 (213)
++|.+.|++++|+|++++| +++ +.|+.|++||+.. ..+..+..+. .|...|.+++|+|++++|++++.+|.++
T Consensus 99 ~~~~~~v~~~~~s~d~~~l~~~~---~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~ 174 (450)
T 2vdu_B 99 PPIYSYIRNLRLTSDESRLIACA---DSDKSLLVFDVDK-TSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVY 174 (450)
T ss_dssp -CCCCCEEEEEECTTSSEEEEEE---GGGTEEEEEEECS-SSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred CccCCceEEEEEcCCCCEEEEEE---CCCCeEEEEECcC-CCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEE
Confidence 4677789999999999996 777 6899999999841 0455666665 4568899999999999999999999999
Q ss_pred EEeccCceEEE----ecccCCCCeeEEEecCC---CCEEEEecCCCcee------------------eceEEEEEccCCc
Q psy7433 81 VIDLRQRVIRS----RFNAHESPVKCLAIDPH---EEFFVTGAGDGDIK------------------SPVKCLAIDPHEE 135 (213)
Q Consensus 81 iwd~~~~~~~~----~~~~~~~~i~~~~~~~~---~~~l~~~~~~~~i~------------------~~v~~~~~~~~~~ 135 (213)
+|++.+++... .+.+|...|.+++|+|+ +++|++++.|+.++ ..|.+++|+ +++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~ 253 (450)
T 2vdu_B 175 SIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDY 253 (450)
T ss_dssp EEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STT
T ss_pred EEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCC
Confidence 99998876443 67789999999999999 99999999999886 678999999 999
Q ss_pred eEEEecCCCcEEEEEccCCeeeeeecCCCCce---------------eEEEecCCCeEEEEeCCCC-eEEEEe-cCCcEE
Q psy7433 136 FFVTGAGDGDIKVWSLSGNHLLYNFPGEHARS---------------SFFKHIGQGVTQLHVDGGS-RLFSCG-ADGSMK 198 (213)
Q Consensus 136 ~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~---------------~~~~~~~~~v~~~~~~~~~-~l~s~~-~d~~i~ 198 (213)
+|++++.|+.|++||+++++.+..+..+.... .........|.+++|+|++ +|++++ .|+.|+
T Consensus 254 ~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~ 333 (450)
T 2vdu_B 254 LLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCII 333 (450)
T ss_dssp EEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEE
T ss_pred EEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEE
Confidence 99999999999999999998887776431000 0000123579999999965 577777 899999
Q ss_pred EEeC
Q psy7433 199 VRQL 202 (213)
Q Consensus 199 iw~~ 202 (213)
+|++
T Consensus 334 iw~~ 337 (450)
T 2vdu_B 334 ILEM 337 (450)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9999
No 98
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.7e-30 Score=208.37 Aligned_cols=190 Identities=18% Similarity=0.255 Sum_probs=160.8
Q ss_pred ccccccCceEEEEEeCC--CCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecC--CCEEEEEcCCC
Q psy7433 2 TYQCHNKITSDFVFLGS--CSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQ--HQLLISAGKKG 77 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~--~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~ 77 (213)
++.+|.++|++++|+|+ +++|+++ +.||.|++||++.. ....+..+..|...|.+++|+|+ ++++++|+.||
T Consensus 48 ~l~~h~~~V~~l~~s~~~~~~~l~s~---s~Dg~I~vwd~~~~-~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg 123 (753)
T 3jro_A 48 TLTGHEGPVWRVDWAHPKFGTILASC---SYDGKVLIWKEENG-RWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG 123 (753)
T ss_dssp EECCCSSCEEEEEECCTTSCSEEEEE---ETTSCEEEEEEETT-EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred eccCCcCceEEEEecCCCCCCEEEEE---eCCCeEEEEECCCC-cccccccccCCCCCeEEEEECCCCCCCEEEEEeCCC
Confidence 46789999999999987 9999999 68999999998431 12366777789999999999998 99999999999
Q ss_pred cEEEEeccCc--eEEEecccCCCCeeEEEecC-------------CCCEEEEecCCCcee--------------------
Q psy7433 78 DICVIDLRQR--VIRSRFNAHESPVKCLAIDP-------------HEEFFVTGAGDGDIK-------------------- 122 (213)
Q Consensus 78 ~v~iwd~~~~--~~~~~~~~~~~~i~~~~~~~-------------~~~~l~~~~~~~~i~-------------------- 122 (213)
.|++||++++ .....+..|...+.+++|+| ++..+++++.|+.++
T Consensus 124 ~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h 203 (753)
T 3jro_A 124 KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH 203 (753)
T ss_dssp EEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCC
T ss_pred cEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCC
Confidence 9999999887 33445667899999999999 589999999999876
Q ss_pred -eceEEEEEccC---CceEEEecCCCcEEEEEccCCe-----eeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEe
Q psy7433 123 -SPVKCLAIDPH---EEFFVTGAGDGDIKVWSLSGNH-----LLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCG 192 (213)
Q Consensus 123 -~~v~~~~~~~~---~~~l~~~~~dg~i~v~d~~~~~-----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~ 192 (213)
..|.+++|+|+ ++++++++.||.|++||++++. .......+ ...|++++|+|++ ++++++
T Consensus 204 ~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~----------~~~v~~l~~spdg~~l~s~s 273 (753)
T 3jro_A 204 SDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKF----------PDVLWRASWSLSGNVLALSG 273 (753)
T ss_dssp SSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCC----------SSCCCCEEECTTTCCEEEEC
T ss_pred CCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCC----------CCceEEEEEcCCCCEEEEEc
Confidence 56899999999 8999999999999999998764 22222223 2789999999965 599999
Q ss_pred cCCcEEEEeCCCC
Q psy7433 193 ADGSMKVRQLPDR 205 (213)
Q Consensus 193 ~d~~i~iw~~~~~ 205 (213)
.||.|++|++..+
T Consensus 274 ~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 274 GDNKVTLWKENLE 286 (753)
T ss_dssp SSSCEECCBCCSS
T ss_pred CCCEEEEEecCCC
Confidence 9999999999854
No 99
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.97 E-value=3.7e-29 Score=212.89 Aligned_cols=187 Identities=19% Similarity=0.330 Sum_probs=168.7
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec--CCCEEEEEcCCCcE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP--QHQLLISAGKKGDI 79 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~v 79 (213)
++++|.+.|.+++|+|++++|+++ +.|+.|++||+ .+++.+..+.+|...|.+++|+| ++.++++++.|+.|
T Consensus 652 ~~~~h~~~v~~~~~s~~~~~l~s~---~~d~~v~vwd~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v 725 (1249)
T 3sfz_A 652 DIKAHEDEVLCCAFSSDDSYIATC---SADKKVKIWDS---ATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFL 725 (1249)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEE---ETTSEEEEEET---TTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCE
T ss_pred EeccCCCCEEEEEEecCCCEEEEE---eCCCeEEEEEC---CCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeE
Confidence 467899999999999999999999 68999999999 56778888999999999999999 55689999999999
Q ss_pred EEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-------------------------------------
Q psy7433 80 CVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------------------------- 122 (213)
Q Consensus 80 ~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------------------------- 122 (213)
++||+++++....+.+|...|.+++|+|+++.+++++.|+.++
T Consensus 726 ~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 805 (1249)
T 3sfz_A 726 KLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCS 805 (1249)
T ss_dssp EEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCC
T ss_pred EEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEE
Confidence 9999999999999999999999999999999999999999775
Q ss_pred -----------------------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCce
Q psy7433 123 -----------------------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARS 167 (213)
Q Consensus 123 -----------------------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~ 167 (213)
..+.+++|+|+++++++++.||.|++||+.++..+..+.+|.
T Consensus 806 ~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~--- 882 (1249)
T 3sfz_A 806 WSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHL--- 882 (1249)
T ss_dssp BCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCS---
T ss_pred ECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCc---
Confidence 235677888888889999999999999999888888888876
Q ss_pred eEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCC
Q psy7433 168 SFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 168 ~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~ 204 (213)
..|.+++|+|++ .|++++.|+.|++|++.+
T Consensus 883 -------~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~ 913 (1249)
T 3sfz_A 883 -------SWVHGVMFSPDGSSFLTASDDQTIRVWETKK 913 (1249)
T ss_dssp -------SCEEEEEECTTSSEEEEEETTSCEEEEEHHH
T ss_pred -------cceEEEEECCCCCEEEEEeCCCeEEEEEccc
Confidence 789999999965 699999999999999764
No 100
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=1.2e-29 Score=192.41 Aligned_cols=185 Identities=12% Similarity=0.110 Sum_probs=144.5
Q ss_pred ccccccCceEEEEEeC--------CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCC-CEEEE
Q psy7433 2 TYQCHNKITSDFVFLG--------SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQH-QLLIS 72 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~--------~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~ 72 (213)
++++|.+.|++++|+| ++++||++ +.|++|+|||+ .....+..+..|...+.+++|+|++ ++|++
T Consensus 131 ~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~---s~D~tv~~Wd~---~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~ 204 (393)
T 4gq1_A 131 GKSGHHNFVNDIDIADVYSADNRLAEQVIASV---GDDCTLIIWRL---TDEGPILAGYPLSSPGISVQFRPSNPNQLIV 204 (393)
T ss_dssp TTTSCSSCEEEEEEEEEECTTCSEEEEEEEEE---ETTSEEEEEEE---ETTEEEEEEEECSSCEEEEEEETTEEEEEEE
T ss_pred ccCCCCCceEEEEEccccccccCCCCCEEEEE---ECCCeEEEEEC---CCCceeeeecCCCCCcEEEEECCCCCceEEe
Confidence 4789999999999998 78999999 68999999998 4556666777889999999999976 58999
Q ss_pred EcCCCcEEEEeccCceEEEe-------------------------cccCCCCeeEEEec-CCCCEEEEecCCCcee----
Q psy7433 73 AGKKGDICVIDLRQRVIRSR-------------------------FNAHESPVKCLAID-PHEEFFVTGAGDGDIK---- 122 (213)
Q Consensus 73 ~~~d~~v~iwd~~~~~~~~~-------------------------~~~~~~~i~~~~~~-~~~~~l~~~~~~~~i~---- 122 (213)
++.|+.|++||+++++.... ..+|...+.++.|. |+++.+++++.|+.++
T Consensus 205 ~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~ 284 (393)
T 4gq1_A 205 GERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNL 284 (393)
T ss_dssp EETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC
T ss_pred cCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEEC
Confidence 99999999999987654322 12456678889886 7999999999999876
Q ss_pred -------------------------------eceEEEEEcc--CCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeE
Q psy7433 123 -------------------------------SPVKCLAIDP--HEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSF 169 (213)
Q Consensus 123 -------------------------------~~v~~~~~~~--~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~ 169 (213)
.......|+| ++.++++|+.||.|++||+.+++....+..+.
T Consensus 285 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~----- 359 (393)
T 4gq1_A 285 FANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLG----- 359 (393)
T ss_dssp -------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECS-----
T ss_pred ccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCC-----
Confidence 1111223433 34477888999999999999888777766665
Q ss_pred EEecCCCeEEEEeCCCCe-EEEEecCCcEEEEeCC
Q psy7433 170 FKHIGQGVTQLHVDGGSR-LFSCGADGSMKVRQLP 203 (213)
Q Consensus 170 ~~~~~~~v~~~~~~~~~~-l~s~~~d~~i~iw~~~ 203 (213)
.+|.+++|+|++. ||+++. +.+.+|.+.
T Consensus 360 -----~~V~svafspdG~~LA~as~-~Gv~lvrL~ 388 (393)
T 4gq1_A 360 -----MPIVDFCWHQDGSHLAIATE-GSVLLTRLM 388 (393)
T ss_dssp -----SCEEEEEECTTSSEEEEEES-SEEEEEEEG
T ss_pred -----CcEEEEEEcCCCCEEEEEeC-CCeEEEEEe
Confidence 6899999999775 666655 457777654
No 101
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=4.8e-29 Score=189.41 Aligned_cols=187 Identities=9% Similarity=0.079 Sum_probs=156.3
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccc-ccceeeeeeecCCceEEEEec-CCCEEEEEcCCCcEEEEeccCc
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQK-KALVQAFVCHDQGASSLVFAP-QHQLLISAGKKGDICVIDLRQR 87 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~-~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~iwd~~~~ 87 (213)
...++++|+...++..+ +.+|.|++|+++.... ...+..+.+|...|.+++|+| ++++|++++.||.|++||+.++
T Consensus 37 ~~~~~~~~~~~~~~~~~--~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~ 114 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEA--SGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDG 114 (402)
T ss_dssp SCSEEECSSEEEEEBCC--SSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTT
T ss_pred CCcEEECCCeEEEEEEE--cCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCC
Confidence 44578888776555433 6899999999853221 135556778999999999999 8999999999999999999987
Q ss_pred -------eEEEecccCCCCeeEEEecCCC-CEEEEecCCCcee-------------------eceEEEEEccCCceEEEe
Q psy7433 88 -------VIRSRFNAHESPVKCLAIDPHE-EFFVTGAGDGDIK-------------------SPVKCLAIDPHEEFFVTG 140 (213)
Q Consensus 88 -------~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~~~~i~-------------------~~v~~~~~~~~~~~l~~~ 140 (213)
+++..+.+|...|.+++|+|++ ..|++++.|+.++ ..|.+++|+|++++|+++
T Consensus 115 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 194 (402)
T 2aq5_A 115 GLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTS 194 (402)
T ss_dssp CCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEE
T ss_pred CCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEE
Confidence 5677888899999999999998 6999999999876 468999999999999999
Q ss_pred cCCCcEEEEEccCCeeeeee-cCCCCceeEEEecCCCeEEEEeCCCCe-EEEE---ecCCcEEEEeCCCCcc
Q psy7433 141 AGDGDIKVWSLSGNHLLYNF-PGEHARSSFFKHIGQGVTQLHVDGGSR-LFSC---GADGSMKVRQLPDRDA 207 (213)
Q Consensus 141 ~~dg~i~v~d~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~---~~d~~i~iw~~~~~~~ 207 (213)
+.|+.|++||+++++.+..+ ..|.. ..+.++.|+|++. |+++ +.|+.|++||+.+...
T Consensus 195 ~~d~~i~iwd~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~ 257 (402)
T 2aq5_A 195 CRDKRVRVIEPRKGTVVAEKDRPHEG---------TRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEE 257 (402)
T ss_dssp ETTSEEEEEETTTTEEEEEEECSSCS---------SSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSS
T ss_pred ecCCcEEEEeCCCCceeeeeccCCCC---------CcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccC
Confidence 99999999999999998888 55541 3489999999776 5666 5899999999988654
No 102
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.97 E-value=4.5e-28 Score=187.06 Aligned_cols=186 Identities=16% Similarity=0.264 Sum_probs=148.8
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec--CCCEEEEEcCCCcE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP--QHQLLISAGKKGDI 79 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~v 79 (213)
++.+|.+.|.+++|+|++ +|+++ +.|++|++||+ .+.+.+..+.+|...|.+++|++ +++++++++.|+.|
T Consensus 157 ~~~~h~~~V~~l~~~~~~-~l~s~---s~dg~i~vwd~---~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i 229 (464)
T 3v7d_B 157 QLSGHDGGVWALKYAHGG-ILVSG---STDRTVRVWDI---KKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTL 229 (464)
T ss_dssp EECCCSSCEEEEEECSTT-EEEEE---ETTSCEEEEET---TTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCE
T ss_pred EEeCCCcCEEEEEEcCCC-EEEEE---eCCCCEEEEEC---CCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcE
Confidence 467899999999999988 88888 68999999999 45667777888888888888874 54555555555555
Q ss_pred EEE---------------------------------------------------------------eccCceEEEecccC
Q psy7433 80 CVI---------------------------------------------------------------DLRQRVIRSRFNAH 96 (213)
Q Consensus 80 ~iw---------------------------------------------------------------d~~~~~~~~~~~~~ 96 (213)
++| |+++++.+..+.+|
T Consensus 230 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~ 309 (464)
T 3v7d_B 230 HVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGH 309 (464)
T ss_dssp EEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred EEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC
Confidence 555 44455556667778
Q ss_pred CCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeee
Q psy7433 97 ESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYN 159 (213)
Q Consensus 97 ~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~ 159 (213)
...+.+++|+|+++.+++++.|+.++ ..|.++.|+ ++++++++.||.|++||++++.....
T Consensus 310 ~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~ 387 (464)
T 3v7d_B 310 TDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFS 387 (464)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeee
Confidence 89999999999999999999999887 678889987 57999999999999999998776665
Q ss_pred ecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEecCCcEEEEeCCCCccc
Q psy7433 160 FPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 160 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d~~i~iw~~~~~~~~ 208 (213)
.... ..+..+++++++. +++++ ||.|++||+.+++.+
T Consensus 388 ~~~~-----------~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~ 425 (464)
T 3v7d_B 388 YHHT-----------NLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLV 425 (464)
T ss_dssp EECT-----------TCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEE
T ss_pred ecCC-----------CCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEE
Confidence 5432 4677788888665 55655 999999999998654
No 103
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=7e-28 Score=185.25 Aligned_cols=183 Identities=20% Similarity=0.345 Sum_probs=159.4
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
.+++|.+.|.. ++.+++++|+++ +.|+.|++||+ .+++.+..+.+|...|.+++|+ ++++++++.||.|++
T Consensus 113 ~l~~h~~~v~~-~~~~~g~~l~sg---~~dg~i~vwd~---~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~v 183 (445)
T 2ovr_B 113 VLKGHDDHVIT-CLQFCGNRIVSG---SDDNTLKVWSA---VTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKV 183 (445)
T ss_dssp EEECSTTSCEE-EEEEETTEEEEE---ETTSCEEEEET---TTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEE
T ss_pred EecccCCCcEE-EEEEcCCEEEEE---ECCCcEEEEEC---CCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEE
Confidence 46789887543 355678999999 68999999999 5677888889999999999997 569999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDG 144 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg 144 (213)
||+.+++.+..+..|...|.+++++ ++.+++++.|+.++ ..+.+++| +++++++++.||
T Consensus 184 wd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg 259 (445)
T 2ovr_B 184 WNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDF 259 (445)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTS
T ss_pred EECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCC
Confidence 9999999999999999999999996 56899999999886 57888888 688999999999
Q ss_pred cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCccc
Q psy7433 145 DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 145 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
.|++||+++++.+..+..|. ..|.++.+ .+..+++++.|+.|++||+.+++.+
T Consensus 260 ~i~iwd~~~~~~~~~~~~~~----------~~v~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~ 312 (445)
T 2ovr_B 260 MVKVWDPETETCLHTLQGHT----------NRVYSLQF-DGIHVVSGSLDTSIRVWDVETGNCI 312 (445)
T ss_dssp CEEEEEGGGTEEEEEECCCS----------SCEEEEEE-CSSEEEEEETTSCEEEEETTTCCEE
T ss_pred EEEEEECCCCcEeEEecCCC----------CceEEEEE-CCCEEEEEeCCCeEEEEECCCCCEE
Confidence 99999999999999998776 67999998 4567999999999999999877543
No 104
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=6.7e-28 Score=184.93 Aligned_cols=179 Identities=16% Similarity=0.316 Sum_probs=157.9
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEec
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL 84 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~ 84 (213)
+|...|.++.+ ++++|+++ +.|+.|++||+ .+.+.+..+.+|...|.+++| ++++|++|+.||.|++||+
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g---~~dg~i~iwd~---~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~ 200 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSG---LRDNTIKIWDK---NTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDV 200 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEE---ESSSCEEEEES---SSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEES
T ss_pred CCCCcEEEEEE--CCCEEEEE---eCCCeEEEEeC---CCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEEC
Confidence 45667888776 78999999 68999999998 567788888899999999998 7889999999999999999
Q ss_pred cCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee--------------------eceEEEEEccCCceEEEecCCC
Q psy7433 85 RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--------------------SPVKCLAIDPHEEFFVTGAGDG 144 (213)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------~~v~~~~~~~~~~~l~~~~~dg 144 (213)
++++.+..+..|...|.+++|++ ..+++++.|+.++ ..|.+++| +++++++|+.||
T Consensus 201 ~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg 276 (435)
T 1p22_A 201 NTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDR 276 (435)
T ss_dssp SSCCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTS
T ss_pred CCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCC
Confidence 99999999999999999999974 5899999999886 46778888 678999999999
Q ss_pred cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCccc
Q psy7433 145 DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 145 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
.|++||+++++.+..+..|. ..|.++.++ +..+++++.||.|++||+.+++.+
T Consensus 277 ~i~vwd~~~~~~~~~~~~~~----------~~v~~~~~~-~~~l~~g~~dg~i~iwd~~~~~~~ 329 (435)
T 1p22_A 277 TIKVWNTSTCEFVRTLNGHK----------RGIACLQYR-DRLVVSGSSDNTIRLWDIECGACL 329 (435)
T ss_dssp EEEEEETTTCCEEEEEECCS----------SCEEEEEEE-TTEEEEEETTSCEEEEETTTCCEE
T ss_pred eEEEEECCcCcEEEEEcCCC----------CcEEEEEeC-CCEEEEEeCCCeEEEEECCCCCEE
Confidence 99999999999999988876 679999985 468999999999999999887543
No 105
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=1.3e-27 Score=178.89 Aligned_cols=185 Identities=16% Similarity=0.231 Sum_probs=144.5
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEE-EEEcCCCcEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLL-ISAGKKGDIC 80 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v~ 80 (213)
++++|...|++++|+|+|++||++ +.+ .+++|+++ ........ +...+..+++.++++.+ ++++.|+.|+
T Consensus 14 ~~~~h~~~V~~v~fs~dg~~la~g---~~~-~~~iw~~~---~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~v~ 84 (355)
T 3vu4_A 14 PENHVSNPVTDYEFNQDQSCLILS---TLK-SFEIYNVH---PVAHIMSQ--EMRHLSKVRMLHRTNYVAFVTGVKEVVH 84 (355)
T ss_dssp -----CCCCCEEEECTTSSEEEEE---CSS-EEEEEEET---TEEEEEEE--ECSCCCEEEECTTSSEEEEECSSTTEEE
T ss_pred ccccCCCceEEEEECCCCCEEEEE---cCC-EEEEEecC---Ccceeeee--ecCCeEEEEEcCCCCEEEEEECCccEEE
Confidence 357899999999999999999998 445 58899983 33333322 33458889999988877 5677889999
Q ss_pred EEeccCceEEEecccCCCCeeEEEecCCC-----------------------------------CEEEE--ecCCCcee-
Q psy7433 81 VIDLRQRVIRSRFNAHESPVKCLAIDPHE-----------------------------------EFFVT--GAGDGDIK- 122 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~~~i~~~~~~~~~-----------------------------------~~l~~--~~~~~~i~- 122 (213)
+||+.+++.+..+. +...+.+++++++. ..+++ ++.++.++
T Consensus 85 iWd~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~i 163 (355)
T 3vu4_A 85 IWDDVKKQDVSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHI 163 (355)
T ss_dssp EEETTTTEEEEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEE
T ss_pred EEECCCCcEEEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEE
Confidence 99999998888776 56678888887642 22333 45555442
Q ss_pred --------------------------------eceEEEEEccCCceEEEecCCCc-EEEEEccCCeeeeeec-C-CCCce
Q psy7433 123 --------------------------------SPVKCLAIDPHEEFFVTGAGDGD-IKVWSLSGNHLLYNFP-G-EHARS 167 (213)
Q Consensus 123 --------------------------------~~v~~~~~~~~~~~l~~~~~dg~-i~v~d~~~~~~~~~~~-~-~~~~~ 167 (213)
..|.+++|+|++++|++|+.|++ |++||+++++++..+. + |.
T Consensus 164 wd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~--- 240 (355)
T 3vu4_A 164 TKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDR--- 240 (355)
T ss_dssp EECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCC---
T ss_pred EECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCC---
Confidence 46899999999999999999998 9999999999999987 4 54
Q ss_pred eEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCc
Q psy7433 168 SFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 168 ~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~ 206 (213)
..|.+++|+|++ +|++++.|+.|++||+....
T Consensus 241 -------~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 241 -------ADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp -------SCEEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred -------CcEEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 789999999965 69999999999999998653
No 106
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.96 E-value=2.3e-28 Score=183.62 Aligned_cols=194 Identities=9% Similarity=0.068 Sum_probs=147.2
Q ss_pred ccccccCceEEEEEeCCCCeEEEeec--------cCCCccEEEEeCCCcccc-cceeee-----eeecCCceEEEEecCC
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGH--------SSESKNVCLWDSLLPQKK-ALVQAF-----VCHDQGASSLVFAPQH 67 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~--------~s~~~~i~iwd~~~~~~~-~~~~~~-----~~~~~~v~~~~~~~~~ 67 (213)
+|.+|...|.+++++ ++.++++.. ++.|+.+++|++...... +..... ..+...+.+++|+|||
T Consensus 68 ~l~~~~~~v~s~~~~--~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg 145 (365)
T 4h5i_A 68 ALEDNDDSPTAIDAS--KGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREG 145 (365)
T ss_dssp ECCTTSCCCCEEEEE--TTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTS
T ss_pred EccCCCCceEEEEeC--CCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCC
Confidence 366788888888765 456665421 145788999997422111 111111 1234568899999999
Q ss_pred CEEEE--EcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------eceEE
Q psy7433 68 QLLIS--AGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPVKC 127 (213)
Q Consensus 68 ~~l~~--~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v~~ 127 (213)
+++++ ++.|+.|++||+++++.+..+. |...|.+++|+|+++++++++.++... ..+.+
T Consensus 146 ~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 224 (365)
T 4h5i_A 146 TVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLSK 224 (365)
T ss_dssp SCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEEE
T ss_pred CEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEEE
Confidence 98764 4578999999999999888876 778899999999999999998776543 57899
Q ss_pred EEEccCCceEEEecCCC----cEEEEEccCCee----eeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEE
Q psy7433 128 LAIDPHEEFFVTGAGDG----DIKVWSLSGNHL----LYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMK 198 (213)
Q Consensus 128 ~~~~~~~~~l~~~~~dg----~i~v~d~~~~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~ 198 (213)
++|+|+++++++++.|+ .+++||+..... ...+..|. ..|++++|+|++ +||+|+.|+.|+
T Consensus 225 v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~----------~~V~~~~~Spdg~~lasgs~D~~V~ 294 (365)
T 4h5i_A 225 INFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRF----------KGITSMDVDMKGELAVLASNDNSIA 294 (365)
T ss_dssp EEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSC----------SCEEEEEECTTSCEEEEEETTSCEE
T ss_pred EEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCC----------CCeEeEEECCCCCceEEEcCCCEEE
Confidence 99999999999998887 688899876543 23444544 789999999976 589999999999
Q ss_pred EEeCCCCccc
Q psy7433 199 VRQLPDRDAV 208 (213)
Q Consensus 199 iw~~~~~~~~ 208 (213)
|||+.+++.+
T Consensus 295 iwd~~~~~~~ 304 (365)
T 4h5i_A 295 LVKLKDLSMS 304 (365)
T ss_dssp EEETTTTEEE
T ss_pred EEECCCCcEE
Confidence 9999987654
No 107
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=7.3e-29 Score=204.92 Aligned_cols=195 Identities=11% Similarity=0.148 Sum_probs=152.6
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee---------eecCCceEEEEecCCCEEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV---------CHDQGASSLVFAPQHQLLIS 72 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~~ 72 (213)
.|++|...+.+++|+|++++||++ +.|++|++||+..... .....+. +|...|.+++|+|++++||+
T Consensus 430 ~l~G~~~~v~sv~~spdg~~laSg---s~DgtVrlWd~~~g~~-~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAs 505 (902)
T 2oaj_A 430 LLKGGVRTKRQKLPAEYGTAFITG---HSNGSVRIYDASHGDI-QDNASFEVNLSRTLNKAKELAVDKISFAAETLELAV 505 (902)
T ss_dssp SCCCSBCCCCCCCCCSEEEEEEEE---ETTSEEEEEESSCCTT-TTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEE
T ss_pred cccCCcCCCCcccccccCcEEEEe---cCCCcEEEEECCCccc-cCCceEEeechhhcCCCCCCceeEEEecCCCCeEEE
Confidence 467888888888999999999999 7999999999954321 1111111 67889999999999999999
Q ss_pred EcCCCcEEEEeccCc---------------------------------------------eEEEecccCCCCeeEEEecC
Q psy7433 73 AGKKGDICVIDLRQR---------------------------------------------VIRSRFNAHESPVKCLAIDP 107 (213)
Q Consensus 73 ~~~d~~v~iwd~~~~---------------------------------------------~~~~~~~~~~~~i~~~~~~~ 107 (213)
|+.||+|++||+.++ +++..+.+|.+.|++++|+|
T Consensus 506 gs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSp 585 (902)
T 2oaj_A 506 SIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSN 585 (902)
T ss_dssp EETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECB
T ss_pred EecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecC
Confidence 999999999999865 23567788999999999999
Q ss_pred CCCEEEEecCCCcee-----------------------eceEEEEEc-----cCC---ceEEEecCCCcEEEEEc---cC
Q psy7433 108 HEEFFVTGAGDGDIK-----------------------SPVKCLAID-----PHE---EFFVTGAGDGDIKVWSL---SG 153 (213)
Q Consensus 108 ~~~~l~~~~~~~~i~-----------------------~~v~~~~~~-----~~~---~~l~~~~~dg~i~v~d~---~~ 153 (213)
+| +|++|+.|+.++ ..|++++|+ ||| ++|++|+.|++|++||+ .+
T Consensus 586 dG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~ 664 (902)
T 2oaj_A 586 IG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASG 664 (902)
T ss_dssp TS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGG
T ss_pred Cc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCC
Confidence 99 999999999875 128999999 885 79999999999999999 77
Q ss_pred CeeeeeecCCCCceeEEEecCCCeEEEE-eC----------------------CCCeEEEEecCCcEEEEeCCCCcc
Q psy7433 154 NHLLYNFPGEHARSSFFKHIGQGVTQLH-VD----------------------GGSRLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~----------------------~~~~l~s~~~d~~i~iw~~~~~~~ 207 (213)
++....+.+|... .+.++|..+. ++ +++++++++ +..||||++.+++.
T Consensus 665 g~~~~~~~~~~~~-----~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~-~~~ir~~~~~~~k~ 735 (902)
T 2oaj_A 665 GKFDVQLMDITNV-----TSKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLITG-FDDIRLITLGKSKS 735 (902)
T ss_dssp GCEEEEEEEEEEC-----CSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEEC-SSEEEEECTTCCCE
T ss_pred CcEEEEecCceec-----CCCCceEEEEeEecCCCCcccCCHHHHhccCCCCCCCeEEEEEe-ccceEEEeCccccc
Confidence 7777777665311 0113444444 33 344555554 77999999998754
No 108
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4.1e-28 Score=187.42 Aligned_cols=174 Identities=12% Similarity=0.104 Sum_probs=144.3
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecC-----CceEEEEecCCCEEEEEcCCCcE
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQ-----GASSLVFAPQHQLLISAGKKGDI 79 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d~~v 79 (213)
.|...|.+++|+|+|.+||++ +.||.|++||. .. ++..+. |.. .+.+++|||+|++|++|+.||+|
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~---s~dg~V~iwd~---~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtV 153 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVL---SNNGNVSVFKD---NK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGEL 153 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEE---ETTSCEEEEET---TE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEE
T ss_pred CCCCcEEEEEECCCCCEEEEE---eCCCcEEEEeC---Cc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEE
Confidence 567889999999999999999 79999999996 22 555555 554 49999999999999999999999
Q ss_pred EEEeccCce-------EEEec----ccCCCCeeEEEecCCCCEEEEecCCCcee---------------------eceEE
Q psy7433 80 CVIDLRQRV-------IRSRF----NAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------------SPVKC 127 (213)
Q Consensus 80 ~iwd~~~~~-------~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------------~~v~~ 127 (213)
++||+.++. .+..+ .+|...|.+++|+|++ +++++.|+.++ ..|.+
T Consensus 154 kIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~s 231 (588)
T 2j04_A 154 QFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITD 231 (588)
T ss_dssp EEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCC
T ss_pred EEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEE
Confidence 999999874 35565 5677899999999999 78888888664 34778
Q ss_pred EEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEe--CCCCe-EEEEecCCcEEEEeCC
Q psy7433 128 LAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHV--DGGSR-LFSCGADGSMKVRQLP 203 (213)
Q Consensus 128 ~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~-l~s~~~d~~i~iw~~~ 203 (213)
++|+ ++++++++ ++.|++||+.+++......+|. ..+..+++ +|++. +++++.||. ++|...
T Consensus 232 vaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~----------~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 232 LKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSL----------ENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp EEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCC----------SCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred EEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCC----------ceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 8898 68888887 6999999999887744443565 78999999 88874 788888999 999975
No 109
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.96 E-value=9.9e-28 Score=183.98 Aligned_cols=180 Identities=21% Similarity=0.393 Sum_probs=157.9
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
++.+|.+.|.+++| ++++|+++ +.||.|++||+ .+++.+..+..|...|.+++|++ +.+++++.||.|++
T Consensus 168 ~~~~h~~~v~~l~~--~~~~l~sg---~~dg~i~vwd~---~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~v 237 (435)
T 1p22_A 168 ILTGHTGSVLCLQY--DERVIITG---SSDSTVRVWDV---NTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAV 237 (435)
T ss_dssp EECCCSSCEEEEEC--CSSEEEEE---ETTSCEEEEES---SSCCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEE
T ss_pred EEcCCCCcEEEEEE--CCCEEEEE---cCCCeEEEEEC---CCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEE
Confidence 46789999999998 78899999 68999999999 56677888889999999999974 59999999999999
Q ss_pred EeccCceEE---EecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEec
Q psy7433 82 IDLRQRVIR---SRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGA 141 (213)
Q Consensus 82 wd~~~~~~~---~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~ 141 (213)
||+++++.. ..+.+|...+.++++ +++.+++++.|+.++ ..+.++.|+ ++++++|+
T Consensus 238 wd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~ 313 (435)
T 1p22_A 238 WDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGS 313 (435)
T ss_dssp EECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEE
T ss_pred EeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEe
Confidence 999887544 567789999999999 688999999999886 567888884 68999999
Q ss_pred CCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCc
Q psy7433 142 GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 142 ~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 206 (213)
.||.|++||+++++++..+.+|. ..|.++++ .+.+|++++.||.|++||+.++.
T Consensus 314 ~dg~i~iwd~~~~~~~~~~~~h~----------~~v~~~~~-~~~~l~sg~~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 314 SDNTIRLWDIECGACLRVLEGHE----------ELVRCIRF-DNKRIVSGAYDGKIKVWDLVAAL 367 (435)
T ss_dssp TTSCEEEEETTTCCEEEEECCCS----------SCEEEEEC-CSSEEEEEETTSCEEEEEHHHHT
T ss_pred CCCeEEEEECCCCCEEEEEeCCc----------CcEEEEEe-cCCEEEEEeCCCcEEEEECCCCC
Confidence 99999999999999999998876 78999999 45689999999999999986543
No 110
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.96 E-value=1.8e-27 Score=194.91 Aligned_cols=190 Identities=19% Similarity=0.288 Sum_probs=166.3
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec-CCCEEEEEcCCCcEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP-QHQLLISAGKKGDIC 80 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~ 80 (213)
++.+|.+.|++++|+|++++|+++ +.|+.|++||++ ........+.+|...|.+++|+| +++.|++++.||.|+
T Consensus 92 ~~~~~~~~v~~~~~s~~~~~l~~~---~~dg~i~vw~~~--~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~ 166 (814)
T 3mkq_A 92 DFEAHPDYIRSIAVHPTKPYVLSG---SDDLTVKLWNWE--NNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVK 166 (814)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEE---ETTSEEEEEEGG--GTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEE
T ss_pred EEecCCCCEEEEEEeCCCCEEEEE---cCCCEEEEEECC--CCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEE
Confidence 467899999999999999999999 689999999984 22356677888999999999999 889999999999999
Q ss_pred EEeccCceEEEecccCC-CCeeEEEecC--CCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEe
Q psy7433 81 VIDLRQRVIRSRFNAHE-SPVKCLAIDP--HEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTG 140 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~-~~i~~~~~~~--~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~ 140 (213)
+||+++++....+..+. ..+.+++|+| ++..+++++.++.++ ..|.+++|+|++++++++
T Consensus 167 vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 246 (814)
T 3mkq_A 167 VWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISG 246 (814)
T ss_dssp EEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEE
T ss_pred EEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEE
Confidence 99998887766665544 8899999999 999999999999886 579999999999999999
Q ss_pred cCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe--EEEEecCCcEEEEeCCCCc
Q psy7433 141 AGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR--LFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 141 ~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~s~~~d~~i~iw~~~~~~ 206 (213)
+.||.|++||+.+++....+..+. ..+.+++|+|++. +++.+.++.+.+|++....
T Consensus 247 ~~dg~v~vwd~~~~~~~~~~~~~~----------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (814)
T 3mkq_A 247 SEDGTLKIWNSSTYKVEKTLNVGL----------ERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDE 304 (814)
T ss_dssp ETTSCEEEEETTTCSEEEEECCSS----------SSEEEEEECTTCGGGEEEEEETTEEEEEECSCCS
T ss_pred eCCCeEEEEECCCCcEEEEeecCC----------CcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCC
Confidence 999999999999999988888775 6899999999764 5667778889999987653
No 111
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.96 E-value=4.4e-27 Score=180.82 Aligned_cols=181 Identities=17% Similarity=0.287 Sum_probs=161.3
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
++++|.+.|.+++|+ +++++++ +.|+.|++||+ .+.+.+..+.+|...|.++.|+ ++.+++++.||.|++
T Consensus 154 ~~~~h~~~v~~~~~~--~~~l~s~---~~dg~i~vwd~---~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~ 223 (445)
T 2ovr_B 154 TLVGHTGGVWSSQMR--DNIIISG---STDRTLKVWNA---ETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRV 223 (445)
T ss_dssp ECCCCSSCEEEEEEE--TTEEEEE---ETTSCEEEEET---TTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEE
T ss_pred EEcCCCCCEEEEEec--CCEEEEE---eCCCeEEEEEC---CcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEE
Confidence 567899999999997 5689998 68999999999 5667788888999999999995 568999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDG 144 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg 144 (213)
||+++++.+..+..|...+.++++ +++.+++++.|+.++ ..+.++.| +++++++++.|+
T Consensus 224 wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~ 299 (445)
T 2ovr_B 224 WDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDT 299 (445)
T ss_dssp EESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTS
T ss_pred EECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCC
Confidence 999999999999999999999999 688999999999886 56888888 788999999999
Q ss_pred cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCcc
Q psy7433 145 DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 145 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 207 (213)
.|++||+++++.+..+..|. ..+.++.++ ++.+++++.||.|++||+.+++.
T Consensus 300 ~i~i~d~~~~~~~~~~~~~~----------~~v~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~ 351 (445)
T 2ovr_B 300 SIRVWDVETGNCIHTLTGHQ----------SLTSGMELK-DNILVSGNADSTVKIWDIKTGQC 351 (445)
T ss_dssp CEEEEETTTCCEEEEECCCC----------SCEEEEEEE-TTEEEEEETTSCEEEEETTTCCE
T ss_pred eEEEEECCCCCEEEEEcCCc----------ccEEEEEEe-CCEEEEEeCCCeEEEEECCCCcE
Confidence 99999999999999988876 678888886 45899999999999999987754
No 112
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=5.2e-29 Score=188.83 Aligned_cols=193 Identities=11% Similarity=0.059 Sum_probs=135.9
Q ss_pred EEEeCCCCeEEEeeccCCCccEEEEeCCCccc--ccceeeeeeecCCceEEEEec--------CCCEEEEEcCCCcEEEE
Q psy7433 13 FVFLGSCSLVATAGHSSESKNVCLWDSLLPQK--KALVQAFVCHDQGASSLVFAP--------QHQLLISAGKKGDICVI 82 (213)
Q Consensus 13 ~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~--~~~~~~~~~~~~~v~~~~~~~--------~~~~l~~~~~d~~v~iw 82 (213)
..+.+++.+||++ +.|++|+|||.+.... ...+..+.+|.+.|++++|+| ++++|++++.|++|++|
T Consensus 95 ~~~~~~~~~las~---~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~W 171 (393)
T 4gq1_A 95 NSSPVYSLFLACV---CQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIW 171 (393)
T ss_dssp --CCEEEEEEEEE---ETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEE
T ss_pred eecCCCCCEEEEE---eCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEE
Confidence 3344466688998 7899999999843221 123445678999999999998 78899999999999999
Q ss_pred eccCceEEEecccCCCCeeEEEecCCCC-EEEEecCCCcee---------------------------------------
Q psy7433 83 DLRQRVIRSRFNAHESPVKCLAIDPHEE-FFVTGAGDGDIK--------------------------------------- 122 (213)
Q Consensus 83 d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~~i~--------------------------------------- 122 (213)
|++++..+..+..|..++.+++|+|++. +|++++.|+.++
T Consensus 172 d~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 251 (393)
T 4gq1_A 172 RLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSS 251 (393)
T ss_dssp EEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------
T ss_pred ECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecc
Confidence 9999888888888999999999999875 799999999886
Q ss_pred ---eceEEEEEc-cCCceEEEecCCCcEEEEEccCCeeeeeecCCCCcee--------EEEecCCCeEEEEeCC--CCe-
Q psy7433 123 ---SPVKCLAID-PHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSS--------FFKHIGQGVTQLHVDG--GSR- 187 (213)
Q Consensus 123 ---~~v~~~~~~-~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~--------~~~~~~~~v~~~~~~~--~~~- 187 (213)
..+.++.|+ |+++.+++++.|+.+++||+..+.....+..+..... .............++| ++.
T Consensus 252 ~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (393)
T 4gq1_A 252 GIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYF 331 (393)
T ss_dssp CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEE
T ss_pred cccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEE
Confidence 346678876 7999999999999999999987776655554331110 0001111222233443 344
Q ss_pred EEEEecCCcEEEEeCCCCccc
Q psy7433 188 LFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 188 l~s~~~d~~i~iw~~~~~~~~ 208 (213)
+++++.||.|++||+.+++..
T Consensus 332 ~~sgs~Dg~V~lwd~~~~~~~ 352 (393)
T 4gq1_A 332 ATAHSQHGLIQLINTYEKDSN 352 (393)
T ss_dssp EEEETTTTEEEEEETTCTTCC
T ss_pred EEEECCCCEEEEEECCCCcEE
Confidence 677888999999999987654
No 113
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.96 E-value=7.6e-27 Score=178.34 Aligned_cols=179 Identities=16% Similarity=0.248 Sum_probs=148.5
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee--eecCCceEEEEecCCCEEEEEcCCCcEEEEeccCc
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV--CHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR 87 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~ 87 (213)
++.|+|+++ ++||++ .|++|+|||. .+++....+. .|...|++++|+|+|++|++|+.||.|++||++++
T Consensus 108 ~~~l~wS~~-n~lAvg----ld~tV~lWd~---~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~ 179 (420)
T 4gga_A 108 LNLVDWSSG-NVLAVA----LDNSVYLWSA---SSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ 179 (420)
T ss_dssp CBCEEECTT-SEEEEE----ETTEEEEEET---TTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred ceeEEECCC-CEEEEE----eCCEEEEEEC---CCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCC
Confidence 567999975 588877 5999999998 4555555544 56778999999999999999999999999999999
Q ss_pred eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------eceEEEEEccCCceEEEecCCCcEEEE
Q psy7433 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPVKCLAIDPHEEFFVTGAGDGDIKVW 149 (213)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~ 149 (213)
+.+..+.+|...+.+++++ +..+++++.|+.+. ..+..+.|+|+++++++++.|+.+++|
T Consensus 180 ~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~ 257 (420)
T 4gga_A 180 KRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVW 257 (420)
T ss_dssp EEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred cEEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEE
Confidence 9999999999999988876 67899999999876 678899999999999999999999999
Q ss_pred EccCCee----eeeecCCCCceeEEEecCCCeEEEEeCCCC--eEEE--EecCCcEEEEeCCCCccc
Q psy7433 150 SLSGNHL----LYNFPGEHARSSFFKHIGQGVTQLHVDGGS--RLFS--CGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 150 d~~~~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s--~~~d~~i~iw~~~~~~~~ 208 (213)
|..+++. +.....+. ..|.+++|+|.+ .+++ |+.|+.|++||+.++...
T Consensus 258 ~~~~~~~~~~~~~~~~~~~----------~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~ 314 (420)
T 4gga_A 258 PSAPGEGGWVPLQTFTQHQ----------GAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACL 314 (420)
T ss_dssp ESSCCSSCSCCSEEECCCS----------SCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEE
T ss_pred eeccccccceeeeeecccC----------CceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccc
Confidence 9976543 33344443 789999999843 4544 457999999999987543
No 114
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.5e-28 Score=181.88 Aligned_cols=171 Identities=11% Similarity=0.123 Sum_probs=140.7
Q ss_pred eCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEecc---------C
Q psy7433 16 LGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLR---------Q 86 (213)
Q Consensus 16 ~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~---------~ 86 (213)
.+++.+|+++ +.|+.|++||+ .+++.+..+. ...|.++.|+|+ +++++.|+.|++|+.. +
T Consensus 45 ~~d~~~l~sg---~~Dg~v~iwd~---~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~ 113 (343)
T 3lrv_A 45 YYDKWVCMCR---CEDGALHFTQL---KDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKT 113 (343)
T ss_dssp SEEEEEEEEE---EETTEEEEEEE---SSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTT
T ss_pred cCCCCEEEEE---CCCCcEEEEEC---CCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCC
Confidence 3577889999 68999999999 4555665554 456888889888 9999999999999765 4
Q ss_pred ceEEEecc-cCCCCeeEEEecC--CCCEEEEecCCCcee------------------eceEEEEEccCCceEEEecCCCc
Q psy7433 87 RVIRSRFN-AHESPVKCLAIDP--HEEFFVTGAGDGDIK------------------SPVKCLAIDPHEEFFVTGAGDGD 145 (213)
Q Consensus 87 ~~~~~~~~-~~~~~i~~~~~~~--~~~~l~~~~~~~~i~------------------~~v~~~~~~~~~~~l~~~~~dg~ 145 (213)
++.+..+. .|..+|.+++|+| +++++++++.|+.++ ..+.+++|+|++++|++|+.||.
T Consensus 114 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~ 193 (343)
T 3lrv_A 114 NKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGI 193 (343)
T ss_dssp CCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSC
T ss_pred cceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCE
Confidence 44344443 5667899999999 999999999999886 46899999999999999999999
Q ss_pred EEEEEccCCeee-eeecC-CCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCccc
Q psy7433 146 IKVWSLSGNHLL-YNFPG-EHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 146 i~v~d~~~~~~~-~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
|++||+++++.. ..+.. |. .+|++++|+|++ +|++++ |+.|++||+++.+.+
T Consensus 194 i~iwd~~~~~~~~~~~~~~h~----------~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~ 248 (343)
T 3lrv_A 194 LDVYNLSSPDQASSRFPVDEE----------AKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGT 248 (343)
T ss_dssp EEEEESSCTTSCCEECCCCTT----------SCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTC
T ss_pred EEEEECCCCCCCccEEeccCC----------CCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcc
Confidence 999999988877 67776 54 789999999976 477777 559999999987543
No 115
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.9e-28 Score=189.35 Aligned_cols=171 Identities=12% Similarity=0.167 Sum_probs=139.4
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEec
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL 84 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~ 84 (213)
+-...|.+++|+|||+++|++ +.|++|+ |. ...+.+ .+|...|.+++|+|+| .++.+.+|+.
T Consensus 13 ~~~~~v~sv~~SpDG~~iASa---s~D~TV~--d~---~~~~~l---~gh~~~v~~V~FsPdg-------~~~~~~~~~~ 74 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTT---FPDISIG--QP---KYAKDI---NCNSKNLFHVKEFPLE-------FENKLDFELA 74 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEEC---SSSEEEE--EE---CCCSCC---SSBGGGTEEEEEECCC-------CCCTTTTSCC
T ss_pred HhhccEEEEEECCCCCEEEEE---cCCceee--cc---ccccee---cCCCccEEEEEECCCC-------CcceEEEEeC
Confidence 345789999999999999999 7999999 64 344333 6899999999999998 4555555554
Q ss_pred cCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-------------e------ceEEEEEccCCceEEEecCCCc
Q psy7433 85 RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-------------S------PVKCLAIDPHEEFFVTGAGDGD 145 (213)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-------------~------~v~~~~~~~~~~~l~~~~~dg~ 145 (213)
+... ...+ .+...|.+++|+|+|..|++++.|+.++ . .+.+++|||+|++|++|+.||+
T Consensus 75 ~~~~-~~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGt 152 (588)
T 2j04_A 75 QQNG-LLNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNKMLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGE 152 (588)
T ss_dssp CSSC-SSTT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTEEEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSE
T ss_pred CCce-Eeec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCceeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCE
Confidence 3222 2222 3578899999999999999999999875 1 3999999999999999999999
Q ss_pred EEEEEccCCe-------eeeee----cCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCc
Q psy7433 146 IKVWSLSGNH-------LLYNF----PGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 146 i~v~d~~~~~-------~~~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 206 (213)
|++||++.+. .+.++ .+|. ..|.+++|+|++ +++++.|+.|++|++.++.
T Consensus 153 VkIWd~~~~~l~~~~~i~l~ti~~~~~gh~----------~~V~sVawSPdg-Laass~D~tVrlWd~~~~~ 213 (588)
T 2j04_A 153 LQFFSIRKNSENTPEFYFESSIRLSDAGSK----------DWVTHIVWYEDV-LVAALSNNSVFSMTVSASS 213 (588)
T ss_dssp EEEEECCCCTTTCCCCEEEEEEECSCTTCC----------CCEEEEEEETTE-EEEEETTCCEEEECCCSSS
T ss_pred EEEEECCCCccccccceeeeeeeccccccc----------ccEEEEEEcCCc-EEEEeCCCeEEEEECCCCc
Confidence 9999998764 24555 3333 689999999999 9999999999999998776
No 116
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.96 E-value=2.5e-26 Score=168.72 Aligned_cols=179 Identities=15% Similarity=0.206 Sum_probs=146.3
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee--eecCCceEEEEecCCCEEEEEcCCCcEEEEeccCc
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV--CHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR 87 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~ 87 (213)
.++|+||+++ +||++ .|++|+|||+ .+++++..+. .|...|++++|+|++++|++|+.||.|++||++++
T Consensus 28 ~~~l~WS~~~-~lAvg----~D~tV~iWd~---~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~ 99 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA----LDNSVYLWSA---SSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ 99 (318)
T ss_dssp CBCEEECTTS-EEEEE----ETTEEEEEET---TTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred ceEEEECCCC-EEEEE----eCCEEEEEEC---CCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCc
Confidence 4679999876 77776 5999999998 4566666554 56778999999999999999999999999999999
Q ss_pred eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------eceEEEEEccCCceEEEecCCCcEEEE
Q psy7433 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPVKCLAIDPHEEFFVTGAGDGDIKVW 149 (213)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~ 149 (213)
+.+..+.+|...+.++.+. +..+++++.++.+. ..+..+.++++++++++++.|+.|++|
T Consensus 100 ~~~~~~~~h~~~~~~~~~~--~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iw 177 (318)
T 4ggc_A 100 KRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVW 177 (318)
T ss_dssp EEEEEEECCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eeEEEecCccceEEEeecC--CCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEE
Confidence 9999999998888776654 67899999998775 678899999999999999999999999
Q ss_pred EccCCeee----eeecCCCCceeEEEecCCCeEEEEeCCCC--e--EEEEecCCcEEEEeCCCCccc
Q psy7433 150 SLSGNHLL----YNFPGEHARSSFFKHIGQGVTQLHVDGGS--R--LFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 150 d~~~~~~~----~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~--l~s~~~d~~i~iw~~~~~~~~ 208 (213)
|+++++.. .....+ ...|.++.+.|.+ . +++++.++.|++||.......
T Consensus 178 d~~~~~~~~~~~~~~~~~----------~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~ 234 (318)
T 4ggc_A 178 PSAPGEGGWVPLQTFTQH----------QGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACL 234 (318)
T ss_dssp ESSCBTTBSCCSEEECCC----------CSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEE
T ss_pred ECCCCcccccceeeeccc----------CCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccc
Confidence 99876532 222222 2689999999843 2 356778999999999876543
No 117
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.1e-26 Score=173.07 Aligned_cols=180 Identities=12% Similarity=0.073 Sum_probs=142.2
Q ss_pred cccCceEEEEEeC--CCCeEEEeeccCCCccEEEEeCCCcccccceeeee-eecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 5 CHNKITSDFVFLG--SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV-CHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 5 ~h~~~v~~~~~~~--~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
+|.++|.+++|+| ++++|+++ +.|+.|++||++ ..+.+.... .+...+.+++|+|++.+|++|+.||.|++
T Consensus 123 ~~~~~v~~~~~~~~~~~~~l~s~---s~dg~i~~wd~~---~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~i 196 (343)
T 3lrv_A 123 DSANEIIYMYGHNEVNTEYFIWA---DNRGTIGFQSYE---DDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDV 196 (343)
T ss_dssp CCSSCEEEEECCC---CCEEEEE---ETTCCEEEEESS---SSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEE
T ss_pred CCCCCEEEEEcCCCCCCCEEEEE---eCCCcEEEEECC---CCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEE
Confidence 4558899999999 99999999 689999999994 444444442 34557999999999999999999999999
Q ss_pred EeccCceEE-Eeccc-CCCCeeEEEecCCCCEEEEecCCCcee--------------------ece--EEEEEccCCceE
Q psy7433 82 IDLRQRVIR-SRFNA-HESPVKCLAIDPHEEFFVTGAGDGDIK--------------------SPV--KCLAIDPHEEFF 137 (213)
Q Consensus 82 wd~~~~~~~-~~~~~-~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------~~v--~~~~~~~~~~~l 137 (213)
||+++++.+ ..+.. |..+|.+++|+|++.+|++++.+ .++ ..+ .+++|+|++++|
T Consensus 197 wd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l 275 (343)
T 3lrv_A 197 YNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQ-TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNM 275 (343)
T ss_dssp EESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESS-BEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEE
T ss_pred EECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCC-eEEEEEcCCCCcceeecccccccccccceEEEECCCCCEE
Confidence 999999877 77887 89999999999999999999954 665 111 259999999999
Q ss_pred EEecC-CCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC---C-CeEEEEecCCcEEEEeCCCC
Q psy7433 138 VTGAG-DGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG---G-SRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 138 ~~~~~-dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~-~~l~s~~~d~~i~iw~~~~~ 205 (213)
++++. |+.+++|++.+....... .++..+.|.+ + ..+++++.|+.++++-....
T Consensus 276 ~~~s~~d~~i~v~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~ 334 (343)
T 3lrv_A 276 IAYSNESNSLTIYKFDKKTKNWTK--------------DEESALCLQSDTADFTDMDVVCGDGGIAAILKTND 334 (343)
T ss_dssp EEEETTTTEEEEEEECTTTCSEEE--------------EEEEECCC----CCCCEEEEEEETTEEEEEEECSS
T ss_pred EEecCCCCcEEEEEEcccccceEe--------------cCceeEecCccccccceeEEEecCCceEEEEecCC
Confidence 99988 999999999654332222 2466777776 3 35888889999888765544
No 118
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.95 E-value=2.3e-26 Score=170.57 Aligned_cols=180 Identities=16% Similarity=0.174 Sum_probs=152.4
Q ss_pred cccc--ccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccc---------ccceeeeeeecCCceEEEEecCCCEE
Q psy7433 2 TYQC--HNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQK---------KALVQAFVCHDQGASSLVFAPQHQLL 70 (213)
Q Consensus 2 ~l~~--h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~l 70 (213)
++.+ |...|.+++|+| +++|+++ +.|+.|++||+ .. .+.+..+. |...+.+++|+|++ +
T Consensus 94 ~~~~~~~~~~v~~l~~~~-~~~l~s~---~~d~~i~iwd~---~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l 163 (342)
T 1yfq_A 94 ALTNNEANLGICRICKYG-DDKLIAA---SWDGLIEVIDP---RNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--L 163 (342)
T ss_dssp ECBSCCCCSCEEEEEEET-TTEEEEE---ETTSEEEEECH---HHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--E
T ss_pred eccccCCCCceEEEEeCC-CCEEEEE---cCCCeEEEEcc---cccccccccccCCeeeEEe-eCCceEEEEecCCc--E
Confidence 3566 999999999999 9999999 68999999998 34 55555555 88899999999887 9
Q ss_pred EEEcCCCcEEEEeccC-ce--EEEecccCCCCeeEEEecC-CCCEEEEecCCCcee------e-----------------
Q psy7433 71 ISAGKKGDICVIDLRQ-RV--IRSRFNAHESPVKCLAIDP-HEEFFVTGAGDGDIK------S----------------- 123 (213)
Q Consensus 71 ~~~~~d~~v~iwd~~~-~~--~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~i~------~----------------- 123 (213)
++++.|+.|++||+++ +. .......+...+.+++|+| +++.+++++.++.++ .
T Consensus 164 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~ 243 (342)
T 1yfq_A 164 IVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRL 243 (342)
T ss_dssp EEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCC
T ss_pred EEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccc
Confidence 9999999999999988 43 3334445788999999999 999999999998664 1
Q ss_pred ---------ceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCC-CCceeEEEecCCCeEEEEeCCCCeEEEEec
Q psy7433 124 ---------PVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGE-HARSSFFKHIGQGVTQLHVDGGSRLFSCGA 193 (213)
Q Consensus 124 ---------~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~ 193 (213)
.|.+++|+|++++|++++.||.|++||+++++.+..+..| . ..|.+++ ..+.+|++++.
T Consensus 244 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~----------~~v~~~~-~~~~~l~s~s~ 312 (342)
T 1yfq_A 244 NLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNE----------DSVVKIA-CSDNILCLATS 312 (342)
T ss_dssp CTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSS----------SEEEEEE-ECSSEEEEEEE
T ss_pred cccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccC----------CCceEec-CCCCeEEEEec
Confidence 8999999999999999999999999999999999999887 5 6899999 33457999999
Q ss_pred CCc-EEEEeC
Q psy7433 194 DGS-MKVRQL 202 (213)
Q Consensus 194 d~~-i~iw~~ 202 (213)
||. .+.|..
T Consensus 313 Dg~~~~~~~~ 322 (342)
T 1yfq_A 313 DDTFKTNAAI 322 (342)
T ss_dssp CTHHHHCSSS
T ss_pred CCcccccccc
Confidence 998 555553
No 119
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=1.1e-24 Score=164.51 Aligned_cols=186 Identities=14% Similarity=0.177 Sum_probs=149.7
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEE-EEcCCCcEEE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLI-SAGKKGDICV 81 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~i 81 (213)
+.+| ..+.+++|+|++++++.++ +.++.|++||+ .+++.+..+..+. .+.+++|+|++++|+ +++.++.|++
T Consensus 28 ~~~~-~~~~~~~~s~dg~~l~~~~--~~d~~i~v~d~---~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v 100 (391)
T 1l0q_A 28 IPVG-SNPMGAVISPDGTKVYVAN--AHSNDVSIIDT---ATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSV 100 (391)
T ss_dssp EECS-SSEEEEEECTTSSEEEEEE--GGGTEEEEEET---TTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred eecC-CCcceEEECCCCCEEEEEC--CCCCeEEEEEC---CCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEE
Confidence 3444 4589999999999874433 58999999998 4566666666444 899999999999775 5556799999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEE-EEecCCCcee----------------eceEEEEEccCCceE-EEecCC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFF-VTGAGDGDIK----------------SPVKCLAIDPHEEFF-VTGAGD 143 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~~~~i~----------------~~v~~~~~~~~~~~l-~~~~~d 143 (213)
||+.+++.+..+.. ...+.+++|+|+++.+ ++++.++.+. ..+.+++|+|+++++ ++++.+
T Consensus 101 ~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~ 179 (391)
T 1l0q_A 101 IDTTSNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDS 179 (391)
T ss_dssp EETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTT
T ss_pred EECCCCeEEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCC
Confidence 99999988877764 4578999999999977 6777788776 567899999999877 677889
Q ss_pred CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEe---cCCcEEEEeCCCCcc
Q psy7433 144 GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCG---ADGSMKVRQLPDRDA 207 (213)
Q Consensus 144 g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~---~d~~i~iw~~~~~~~ 207 (213)
+.|++||+++++....+..+ ..+.+++|+|++ +|++++ .++.|++||+.+++.
T Consensus 180 ~~v~~~d~~~~~~~~~~~~~-----------~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~ 236 (391)
T 1l0q_A 180 MSISVIDTVTNSVIDTVKVE-----------AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKI 236 (391)
T ss_dssp TEEEEEETTTTEEEEEEECS-----------SEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEE
T ss_pred CEEEEEECCCCeEEEEEecC-----------CCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeE
Confidence 99999999998888777643 568999999965 577666 689999999987643
No 120
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=1.3e-24 Score=164.11 Aligned_cols=182 Identities=10% Similarity=0.136 Sum_probs=150.6
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEE-EEEcCCCcEEEEeccC
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLL-ISAGKKGDICVIDLRQ 86 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v~iwd~~~ 86 (213)
..+.+++|+|++++|+.++ +.++.|++||+ ...+.+..+.. ...+.+++|+|+++.| ++++.++.|++||+++
T Consensus 74 ~~v~~~~~spdg~~l~~~~--~~~~~v~v~d~---~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 147 (391)
T 1l0q_A 74 SSPQGVAVSPDGKQVYVTN--MASSTLSVIDT---TSNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVT 147 (391)
T ss_dssp SSEEEEEECTTSSEEEEEE--TTTTEEEEEET---TTTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred CCccceEECCCCCEEEEEE--CCCCEEEEEEC---CCCeEEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 4899999999999886664 57899999998 45555555553 4568999999999977 6888899999999999
Q ss_pred ceEEEecccCCCCeeEEEecCCCCEE-EEecCCCcee----------------eceEEEEEccCCceEEEec---CCCcE
Q psy7433 87 RVIRSRFNAHESPVKCLAIDPHEEFF-VTGAGDGDIK----------------SPVKCLAIDPHEEFFVTGA---GDGDI 146 (213)
Q Consensus 87 ~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~~~~i~----------------~~v~~~~~~~~~~~l~~~~---~dg~i 146 (213)
++.+..+..+ ..+.+++|+|+++.+ ++++.++.+. ..+.+++|+|+++++++++ .++.|
T Consensus 148 ~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v 226 (391)
T 1l0q_A 148 KAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTV 226 (391)
T ss_dssp TEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEE
T ss_pred CcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcE
Confidence 9888877754 557999999999887 5667777765 5678999999999888887 68999
Q ss_pred EEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eE-EEEecCCcEEEEeCCCCcc
Q psy7433 147 KVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RL-FSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 147 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l-~s~~~d~~i~iw~~~~~~~ 207 (213)
++||+++++.+..+..+ ..+.+++|+|++ ++ ++++.|+.|++||+.+++.
T Consensus 227 ~~~d~~~~~~~~~~~~~-----------~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~ 278 (391)
T 1l0q_A 227 SMIDTGTNKITARIPVG-----------PDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTI 278 (391)
T ss_dssp EEEETTTTEEEEEEECC-----------SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred EEEECCCCeEEEEEecC-----------CCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcE
Confidence 99999999988888775 357899999976 45 6778899999999987643
No 121
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.94 E-value=8.7e-26 Score=167.21 Aligned_cols=155 Identities=19% Similarity=0.325 Sum_probs=131.2
Q ss_pred ccccccCceEEEEEeC--CCCeEEEeeccCCCccEEEEeCCCccc------ccceeeeeeecCCceEEEEecC--CCEEE
Q psy7433 2 TYQCHNKITSDFVFLG--SCSLVATAGHSSESKNVCLWDSLLPQK------KALVQAFVCHDQGASSLVFAPQ--HQLLI 71 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~--~~~~l~~~g~~s~~~~i~iwd~~~~~~------~~~~~~~~~~~~~v~~~~~~~~--~~~l~ 71 (213)
++++|...|.+++|+| ++++|+++ +.|+.|++||++.... .+.+..+..|...|.+++|+|+ +++|+
T Consensus 52 ~~~~~~~~v~~~~~~~~~d~~~l~s~---~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~ 128 (351)
T 3f3f_A 52 SWRAHDSSIVAIDWASPEYGRIIASA---SYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLA 128 (351)
T ss_dssp EEECCSSCEEEEEECCGGGCSEEEEE---ETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEE
T ss_pred eeccCCCcEEEEEEcCCCCCCEEEEE---cCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEE
Confidence 3578999999999999 69999999 6899999999953211 1456777789999999999999 99999
Q ss_pred EEcCCCcEEEEeccCce------------------------------------------------------------EEE
Q psy7433 72 SAGKKGDICVIDLRQRV------------------------------------------------------------IRS 91 (213)
Q Consensus 72 ~~~~d~~v~iwd~~~~~------------------------------------------------------------~~~ 91 (213)
+++.|+.|++||+++++ .+.
T Consensus 129 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 208 (351)
T 3f3f_A 129 CLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAA 208 (351)
T ss_dssp EEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEE
T ss_pred EecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeee
Confidence 99999999999986542 144
Q ss_pred ecccCCCCeeEEEecCCC----CEEEEecCCCcee---------------------------------------------
Q psy7433 92 RFNAHESPVKCLAIDPHE----EFFVTGAGDGDIK--------------------------------------------- 122 (213)
Q Consensus 92 ~~~~~~~~i~~~~~~~~~----~~l~~~~~~~~i~--------------------------------------------- 122 (213)
.+.+|...|.+++|+|++ ++|++++.|+.++
T Consensus 209 ~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (351)
T 3f3f_A 209 KLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKA 288 (351)
T ss_dssp ECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-------------------------------------
T ss_pred ecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceee
Confidence 456688899999999998 8999999999775
Q ss_pred ------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeee
Q psy7433 123 ------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYN 159 (213)
Q Consensus 123 ------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~ 159 (213)
..|.+++|+|++++|++++.||.|++||+.+++....
T Consensus 289 ~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~ 343 (351)
T 3f3f_A 289 ELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKC 343 (351)
T ss_dssp --CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEE
T ss_pred eecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhh
Confidence 3689999999999999999999999999987654433
No 122
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.94 E-value=1.2e-24 Score=166.33 Aligned_cols=187 Identities=14% Similarity=0.175 Sum_probs=155.8
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEE-EEcCCCcEEE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLI-SAGKKGDICV 81 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~i 81 (213)
+.+|.+.|.+++|+|++++++++ +.++.|++||+ ...+.+..+..|...+.+++|+|++++++ +++.++.|++
T Consensus 165 ~~~~~~~v~~~~~~~~~~~~~s~---~~d~~v~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~ 238 (433)
T 3bws_A 165 YKKKLGFVETISIPEHNELWVSQ---MQANAVHVFDL---KTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISV 238 (433)
T ss_dssp HHTTCCEEEEEEEGGGTEEEEEE---GGGTEEEEEET---TTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred ccccCCceeEEEEcCCCEEEEEE---CCCCEEEEEEC---CCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEE
Confidence 45788999999999999999999 68999999998 45667777778888999999999998875 5558999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEec--------CCCcee----------------eceEEEEEccCCc-e
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGA--------GDGDIK----------------SPVKCLAIDPHEE-F 136 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--------~~~~i~----------------~~v~~~~~~~~~~-~ 136 (213)
||+++++.+..+.. ...+.+++|+|+++.+++++ .|+.++ ..+.+++|+|+++ +
T Consensus 239 ~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l 317 (433)
T 3bws_A 239 IDRKTKLEIRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKI 317 (433)
T ss_dssp EETTTTEEEEECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEE
T ss_pred EECCCCcEEEEecC-CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEE
Confidence 99999988888765 45689999999999998887 355554 5678899999997 4
Q ss_pred EEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEec---------------CCcEEEE
Q psy7433 137 FVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGA---------------DGSMKVR 200 (213)
Q Consensus 137 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~---------------d~~i~iw 200 (213)
+++++.++.|++||+++++....+... ..+.+++|+|++ ++++++. ||.|++|
T Consensus 318 ~~~~~~~~~v~v~d~~~~~~~~~~~~~-----------~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~ 386 (433)
T 3bws_A 318 YVSDMCCSKIEVYDLKEKKVQKSIPVF-----------DKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVI 386 (433)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECS-----------SSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEE
T ss_pred EEEecCCCEEEEEECCCCcEEEEecCC-----------CCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEE
Confidence 566789999999999998888777632 578999999976 4666665 5799999
Q ss_pred eCCCCcc
Q psy7433 201 QLPDRDA 207 (213)
Q Consensus 201 ~~~~~~~ 207 (213)
|+.+++.
T Consensus 387 d~~~~~~ 393 (433)
T 3bws_A 387 DTTTDTV 393 (433)
T ss_dssp ETTTTEE
T ss_pred ECCCCcE
Confidence 9987653
No 123
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.94 E-value=4.6e-25 Score=164.74 Aligned_cols=119 Identities=18% Similarity=0.281 Sum_probs=104.3
Q ss_pred ccccceeeeeeecCCceEEEEecC---CCEEEEEcCCCcEEEEeccC-ceEE-EecccCCCCeeEEEecCCCCEEEEecC
Q psy7433 43 QKKALVQAFVCHDQGASSLVFAPQ---HQLLISAGKKGDICVIDLRQ-RVIR-SRFNAHESPVKCLAIDPHEEFFVTGAG 117 (213)
Q Consensus 43 ~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~v~iwd~~~-~~~~-~~~~~~~~~i~~~~~~~~~~~l~~~~~ 117 (213)
...+.+..+.+|...|++++|+|+ +++|++++.||.|++||+++ +..+ ..+..|...|.+++|+|++++|++++.
T Consensus 27 ~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 106 (368)
T 3mmy_A 27 NPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASC 106 (368)
T ss_dssp CTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEET
T ss_pred CCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcC
Confidence 455667778899999999999998 69999999999999999987 5444 677889999999999999999999999
Q ss_pred CCcee----------------eceEEEEE--ccCCceEEEecCCCcEEEEEccCCeeeeeec
Q psy7433 118 DGDIK----------------SPVKCLAI--DPHEEFFVTGAGDGDIKVWSLSGNHLLYNFP 161 (213)
Q Consensus 118 ~~~i~----------------~~v~~~~~--~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~ 161 (213)
|+.++ ..|.+++| +|++++|++++.||.|++||+++++.+..+.
T Consensus 107 dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 168 (368)
T 3mmy_A 107 DKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQ 168 (368)
T ss_dssp TSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEE
T ss_pred CCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEe
Confidence 99886 78999999 8999999999999999999998776554443
No 124
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.94 E-value=2.6e-24 Score=160.96 Aligned_cols=194 Identities=16% Similarity=0.167 Sum_probs=141.4
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCC--------------------
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQH-------------------- 67 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-------------------- 67 (213)
..+..+++.++++.++..| +.++.|++||. .+++.+..+. +...|.+++|+++.
T Consensus 59 ~~~~~~~~~~~~~~~~~~~--~~d~~v~iWd~---~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~ 132 (355)
T 3vu4_A 59 RHLSKVRMLHRTNYVAFVT--GVKEVVHIWDD---VKKQDVSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKR 132 (355)
T ss_dssp SCCCEEEECTTSSEEEEEC--SSTTEEEEEET---TTTEEEEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCB
T ss_pred CCeEEEEEcCCCCEEEEEE--CCccEEEEEEC---CCCcEEEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCcee
Confidence 3577889999888886554 57889999998 4555665554 55677777776542
Q ss_pred ---------------CEEEE--EcCCCcEEEEeccCce---------------E-EEecccCCCCeeEEEecCCCCEEEE
Q psy7433 68 ---------------QLLIS--AGKKGDICVIDLRQRV---------------I-RSRFNAHESPVKCLAIDPHEEFFVT 114 (213)
Q Consensus 68 ---------------~~l~~--~~~d~~v~iwd~~~~~---------------~-~~~~~~~~~~i~~~~~~~~~~~l~~ 114 (213)
.+++. |+.||.|++||+++++ + +..+.+|...|.+++|+|++++|++
T Consensus 133 ~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s 212 (355)
T 3vu4_A 133 ITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVAT 212 (355)
T ss_dssp SSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEE
T ss_pred eEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEE
Confidence 23443 5788999999998765 2 6678889999999999999999999
Q ss_pred ecCCCc-ee-------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCee--eeeecC--------CC
Q psy7433 115 GAGDGD-IK-------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHL--LYNFPG--------EH 164 (213)
Q Consensus 115 ~~~~~~-i~-------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~--~~~~~~--------~~ 164 (213)
++.|+. ++ ..|.+++|+|++++|++++.|+.|++||++.... ...+.. ..
T Consensus 213 ~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (355)
T 3vu4_A 213 CSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSE 292 (355)
T ss_dssp EETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCS
T ss_pred EeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccc
Confidence 999998 76 4689999999999999999999999999975431 111111 00
Q ss_pred CceeEEE---ecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 165 ARSSFFK---HIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 165 ~~~~~~~---~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
.....+. ........++|++++ .+++++.||.+++|++..+..
T Consensus 293 ~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~~ 339 (355)
T 3vu4_A 293 WSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDDE 339 (355)
T ss_dssp SCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEETT
T ss_pred cceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCCC
Confidence 0000000 011234678999976 689999999999999876543
No 125
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=1.1e-23 Score=160.63 Aligned_cols=184 Identities=12% Similarity=0.105 Sum_probs=144.7
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCC---ccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEE-EEcCCC
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSES---KNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLI-SAGKKG 77 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~---~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~ 77 (213)
.+.+|...|.+++|+|+|+.|++++ .+ ..|++||++ +++. ..+..+...+.+++|+|+|++|+ +++.++
T Consensus 173 ~l~~~~~~v~~~~~Spdg~~la~~s---~~~~~~~i~~~d~~---tg~~-~~l~~~~~~~~~~~~spdg~~la~~~~~~g 245 (415)
T 2hqs_A 173 VVHRSPQPLMSPAWSPDGSKLAYVT---FESGRSALVIQTLA---NGAV-RQVASFPRHNGAPAFSPDGSKLAFALSKTG 245 (415)
T ss_dssp EEEEESSCEEEEEECTTSSEEEEEE---CTTSSCEEEEEETT---TCCE-EEEECCSSCEEEEEECTTSSEEEEEECTTS
T ss_pred EEeCCCCcceeeEEcCCCCEEEEEE---ecCCCcEEEEEECC---CCcE-EEeecCCCcccCEEEcCCCCEEEEEEecCC
Confidence 4567899999999999999999984 45 499999994 3333 34566778899999999999887 666655
Q ss_pred c--EEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecC-CC--cee----------------eceEEEEEccCCce
Q psy7433 78 D--ICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAG-DG--DIK----------------SPVKCLAIDPHEEF 136 (213)
Q Consensus 78 ~--v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-~~--~i~----------------~~v~~~~~~~~~~~ 136 (213)
. |++||+++++. ..+..+...+.+++|+|+++.|++++. ++ .+. ..+.+++|+|+|++
T Consensus 246 ~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~ 324 (415)
T 2hqs_A 246 SLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKF 324 (415)
T ss_dssp SCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSE
T ss_pred CceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCE
Confidence 4 99999998875 456677888999999999999888876 34 232 45778999999999
Q ss_pred EEEecCC---CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEecCC---cEEEEeCCCC
Q psy7433 137 FVTGAGD---GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGADG---SMKVRQLPDR 205 (213)
Q Consensus 137 l~~~~~d---g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d~---~i~iw~~~~~ 205 (213)
|+.++.+ ..|.+||+.+++.. .+..+ ..+.+++|+|++. |++++.++ .|++||+..+
T Consensus 325 l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~-----------~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~ 388 (415)
T 2hqs_A 325 MVMVSSNGGQQHIAKQDLATGGVQ-VLSST-----------FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR 388 (415)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEE-ECCCS-----------SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSC
T ss_pred EEEEECcCCceEEEEEECCCCCEE-EecCC-----------CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCC
Confidence 9888764 58999999887663 34332 3688999999764 77777766 7999998754
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.93 E-value=1.4e-24 Score=165.96 Aligned_cols=183 Identities=13% Similarity=0.164 Sum_probs=150.4
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccccccee-----eeeeecCCceEEEEecCCCEEEEEcCCCcEEEE
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQ-----AFVCHDQGASSLVFAPQHQLLISAGKKGDICVI 82 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iw 82 (213)
..+.+++|+|++.+++++ +.++.|++||++ +++... .+.+|...+.+++|+++++++++++.|+.|++|
T Consensus 123 ~~~~~~~~s~~~~~~~~~---~~~~~i~~~d~~---~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~ 196 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPL---LEDEGMDVLDIN---SGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVF 196 (433)
T ss_dssp SCBCCCEESSSSEEEEEB---TTSSSEEEEETT---TCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEE
T ss_pred CCceEEEEeCCCeEEEEe---CCCCeEEEEECC---CCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEE
Confidence 446689999977777777 688999999984 444444 334677789999999999999999999999999
Q ss_pred eccCceEEEecccCCCCeeEEEecCCCCEEE-EecCCCcee----------------eceEEEEEccCCceEEEec----
Q psy7433 83 DLRQRVIRSRFNAHESPVKCLAIDPHEEFFV-TGAGDGDIK----------------SPVKCLAIDPHEEFFVTGA---- 141 (213)
Q Consensus 83 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~~~~i~----------------~~v~~~~~~~~~~~l~~~~---- 141 (213)
|+++++.+..+..+...+.+++|+|+++.++ +++.++.+. ..+.+++|+|+++++++++
T Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~ 276 (433)
T 3bws_A 197 DLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSAS 276 (433)
T ss_dssp ETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESC
T ss_pred ECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCC
Confidence 9999998888888888999999999999875 444778775 5688999999999988887
Q ss_pred ----CCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-e-EEEEecCCcEEEEeCCCCcc
Q psy7433 142 ----GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-R-LFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 142 ----~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~-l~s~~~d~~i~iw~~~~~~~ 207 (213)
.|+.|++||+++++....+... ..+.+++|+|++ . +++++.|+.|++||+.+++.
T Consensus 277 ~~~~~dg~i~~~d~~~~~~~~~~~~~-----------~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~ 337 (433)
T 3bws_A 277 NQESGGGRLGIYSMDKEKLIDTIGPP-----------GNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKV 337 (433)
T ss_dssp TTCSCCEEEEEEETTTTEEEEEEEEE-----------ECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEE
T ss_pred ccccCCCeEEEEECCCCcEEeeccCC-----------CCcceEEECCCCCEEEEEecCCCEEEEEECCCCcE
Confidence 5889999999988776665321 468899999976 4 56778999999999987643
No 127
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.92 E-value=1.1e-23 Score=161.43 Aligned_cols=168 Identities=11% Similarity=0.102 Sum_probs=121.2
Q ss_pred ccCceEEEEEeCCCCeEE----EeeccCCCccEEEEeCCCcc-----ccc---ceeeeeeecCCceEEEEecC-CCEEEE
Q psy7433 6 HNKITSDFVFLGSCSLVA----TAGHSSESKNVCLWDSLLPQ-----KKA---LVQAFVCHDQGASSLVFAPQ-HQLLIS 72 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~----~~g~~s~~~~i~iwd~~~~~-----~~~---~~~~~~~~~~~v~~~~~~~~-~~~l~~ 72 (213)
|...|.+++|+|++++|+ ++ +.|+.|++||++... ..+ .+..+.+|...|.+++|+|+ +++|++
T Consensus 91 ~~~~v~~l~~spdg~~lav~~~sg---s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las 167 (434)
T 2oit_A 91 MKFPIHHLALSCDNLTLSACMMSS---EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAV 167 (434)
T ss_dssp CSSCEEEEEECTTSCEEEEEEEET---TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEE
T ss_pred CCCcccEEEEcCCCCEEEEEEecc---CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEE
Confidence 456799999999999999 66 789999999984220 001 24455678999999999997 789999
Q ss_pred EcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEecCCCcEEEEEcc
Q psy7433 73 AGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLS 152 (213)
Q Consensus 73 ~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~ 152 (213)
++.||.|++||++++........|... +.+++|+|+|++|++|+.||.|++||++
T Consensus 168 ~s~Dg~v~iwD~~~~~~~~~~~~~~~~-------------------------v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 168 CLADGSIAVLQVTETVKVCATLPSTVA-------------------------VTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp EETTSCEEEEEESSSEEEEEEECGGGC-------------------------EEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred EECCCeEEEEEcCCCcceeeccCCCCc-------------------------eeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 999999999999987554433333333 4556666677899999999999999998
Q ss_pred CCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEE--EEecCC------cEEEEeCCCC
Q psy7433 153 GNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLF--SCGADG------SMKVRQLPDR 205 (213)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~--s~~~d~------~i~iw~~~~~ 205 (213)
++....+..+.... ..+...|.++.|+++..++ ....|| .+++|++.+.
T Consensus 223 -~~~~~~~~~~~~~~---~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 223 -LQEKKVIPCPPFYE---SDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp -CCEEEEECCCTTCC---TTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred -CcccccccCCcccC---CCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 55555554432110 0011379999999876643 233443 3899999865
No 128
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.92 E-value=1.9e-23 Score=152.57 Aligned_cols=140 Identities=11% Similarity=0.133 Sum_probs=106.0
Q ss_pred ccccCceEEEEEeC---CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeec---CCceEEEEecCCCEE-------
Q psy7433 4 QCHNKITSDFVFLG---SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHD---QGASSLVFAPQHQLL------- 70 (213)
Q Consensus 4 ~~h~~~v~~~~~~~---~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l------- 70 (213)
.+|...++.++|+| ++.+||++ +.|++|+|||+ .++++++++.+|. ..+.+++|+|++.++
T Consensus 175 ~~~~~~v~~l~fs~~~g~~~~LaSg---S~D~TIkIWDl---~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~ 248 (356)
T 2w18_A 175 FLMPPEETILTFAEVQGMQEALLGT---TIMNNIVIWNL---KTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPC 248 (356)
T ss_dssp EECCCSSCEEEEEEEETSTTEEEEE---ETTSEEEEEET---TTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC---
T ss_pred ccCCCceeeEEeeccCCCCceEEEe---cCCCcEEEEEC---CCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCC
Confidence 35555666666666 55778888 79999999999 6778888887654 357788999999876
Q ss_pred -----EEEcCCCcEEEEeccCceEEEec-----ccCCCCeeEEEecCCCCEEEEecCCCcee-----------------e
Q psy7433 71 -----ISAGKKGDICVIDLRQRVIRSRF-----NAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------S 123 (213)
Q Consensus 71 -----~~~~~d~~v~iwd~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~ 123 (213)
++|+.|++|++||..+++.+..+ .+|...+.+..++ +..+++++.|++++ .
T Consensus 249 ~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~ 326 (356)
T 2w18_A 249 AKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVSD 326 (356)
T ss_dssp ---------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC--
T ss_pred CcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCCC
Confidence 56788999999999999877654 2454444433333 77899999999987 2
Q ss_pred -ceEEEEEccCCceEEEecCCCcEEEEEc
Q psy7433 124 -PVKCLAIDPHEEFFVTGAGDGDIKVWSL 151 (213)
Q Consensus 124 -~v~~~~~~~~~~~l~~~~~dg~i~v~d~ 151 (213)
.+.+++|+|+|++|++|+.|++|+|||+
T Consensus 327 ~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 327 QHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 2446899999999999999999999996
No 129
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.90 E-value=6.5e-22 Score=143.33 Aligned_cols=186 Identities=8% Similarity=0.056 Sum_probs=137.0
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccc-ccceeeeeee-cCCceEEEEecCCCEEEEEc--CCCc
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQK-KALVQAFVCH-DQGASSLVFAPQHQLLISAG--KKGD 78 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~-~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~--~d~~ 78 (213)
+..|...|.+++|+|++++|+++ .++.|++||++ . .+.......+ ...+.+++|+|++++|++++ .++.
T Consensus 37 ~~~~~~~v~~~~~spdg~~l~~~----~~~~i~~~d~~---~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~ 109 (297)
T 2ojh_A 37 VWQTPELFEAPNWSPDGKYLLLN----SEGLLYRLSLA---GDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGK 109 (297)
T ss_dssp EEEESSCCEEEEECTTSSEEEEE----ETTEEEEEESS---SCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSS
T ss_pred eccCCcceEeeEECCCCCEEEEE----cCCeEEEEeCC---CCCCceEeccccccccccceEECCCCCEEEEEEeCCCCc
Confidence 45688899999999999999998 47899999984 3 3344433334 36788999999999999988 3345
Q ss_pred EEEEec--cCceEEEecccCCCCeeEEEecCCCCEEE-EecCCCcee------------------eceEEEEEccCCceE
Q psy7433 79 ICVIDL--RQRVIRSRFNAHESPVKCLAIDPHEEFFV-TGAGDGDIK------------------SPVKCLAIDPHEEFF 137 (213)
Q Consensus 79 v~iwd~--~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~~~~i~------------------~~v~~~~~~~~~~~l 137 (213)
..+|.+ .+++ ...+.. ...+..++|+|+++.++ ++..++.+. ..+.+++|+|+++++
T Consensus 110 ~~l~~~~~~~~~-~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l 187 (297)
T 2ojh_A 110 SAIYLLPSTGGT-PRLMTK-NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWI 187 (297)
T ss_dssp CEEEEEETTCCC-CEECCS-SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEE
T ss_pred ceEEEEECCCCc-eEEeec-CCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEE
Confidence 555554 4444 334443 33488999999999877 566666443 568899999999987
Q ss_pred EEec-CCCcEEEEEcc-CCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecC-----------CcEEEEeCC
Q psy7433 138 VTGA-GDGDIKVWSLS-GNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGAD-----------GSMKVRQLP 203 (213)
Q Consensus 138 ~~~~-~dg~i~v~d~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d-----------~~i~iw~~~ 203 (213)
+.++ .++.+++|++. .+.....+..+. ..+..+.|+|++ +|++++.+ +.|++||+.
T Consensus 188 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----------~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~ 257 (297)
T 2ojh_A 188 YFNSSRTGQMQIWRVRVDGSSVERITDSA----------YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMD 257 (297)
T ss_dssp EEEECTTSSCEEEEEETTSSCEEECCCCS----------EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETT
T ss_pred EEEecCCCCccEEEECCCCCCcEEEecCC----------cccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecC
Confidence 7665 58899999986 455555565543 568899999976 46666655 569999998
Q ss_pred CCcc
Q psy7433 204 DRDA 207 (213)
Q Consensus 204 ~~~~ 207 (213)
+++.
T Consensus 258 ~~~~ 261 (297)
T 2ojh_A 258 GGNV 261 (297)
T ss_dssp SCSC
T ss_pred CCCc
Confidence 7643
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.89 E-value=5.3e-22 Score=151.38 Aligned_cols=189 Identities=10% Similarity=0.045 Sum_probs=139.2
Q ss_pred cccccCceEEEEEeC--------------CCCeEEEeeccCCC---ccEEEEeCCCcccccceeeeeeecCCceEEEEec
Q psy7433 3 YQCHNKITSDFVFLG--------------SCSLVATAGHSSES---KNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP 65 (213)
Q Consensus 3 l~~h~~~v~~~~~~~--------------~~~~l~~~g~~s~~---~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 65 (213)
+.+|...++.+++++ .+..++.++....+ +.|++||++ ....+.+..|...+.+++|+|
T Consensus 113 ~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~----g~~~~~l~~~~~~v~~~~~Sp 188 (415)
T 2hqs_A 113 YKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYD----GYNQFVVHRSPQPLMSPAWSP 188 (415)
T ss_dssp EEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETT----SCSCEEEEEESSCEEEEEECT
T ss_pred EEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCC----CCCCEEEeCCCCcceeeEEcC
Confidence 455666666665554 15566655321112 799999983 345667778999999999999
Q ss_pred CCCEEEEEcCCC---cEEEEeccCceEEEecccCCCCeeEEEecCCCCEEE-EecCCCc--ee----------------e
Q psy7433 66 QHQLLISAGKKG---DICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFV-TGAGDGD--IK----------------S 123 (213)
Q Consensus 66 ~~~~l~~~~~d~---~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~~~~--i~----------------~ 123 (213)
+|++|++++.++ .|++||+++++.. .+..+...+.+++|+|+++.|+ +++.++. +. .
T Consensus 189 dg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~ 267 (415)
T 2hqs_A 189 DGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRS 267 (415)
T ss_dssp TSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSS
T ss_pred CCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCC
Confidence 999999998875 9999999998765 4556778899999999999888 5665554 33 5
Q ss_pred ceEEEEEccCCceEEEecC-CC--cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecC---Cc
Q psy7433 124 PVKCLAIDPHEEFFVTGAG-DG--DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGAD---GS 196 (213)
Q Consensus 124 ~v~~~~~~~~~~~l~~~~~-dg--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d---~~ 196 (213)
.+.+++|+|+|++|+.++. ++ .|.+||+.+++.. .+..+. ..+.+++|+|++ +|++++.+ ..
T Consensus 268 ~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~-~l~~~~----------~~~~~~~~spdG~~l~~~~~~~g~~~ 336 (415)
T 2hqs_A 268 NNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ-RITWEG----------SQNQDADVSSDGKFMVMVSSNGGQQH 336 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE-ECCCSS----------SEEEEEEECTTSSEEEEEEECSSCEE
T ss_pred cccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEE-EEecCC----------CcccCeEECCCCCEEEEEECcCCceE
Confidence 6889999999998888776 44 6777788776533 333332 568899999976 46666654 58
Q ss_pred EEEEeCCCCcc
Q psy7433 197 MKVRQLPDRDA 207 (213)
Q Consensus 197 i~iw~~~~~~~ 207 (213)
|++||+.+++.
T Consensus 337 i~~~d~~~~~~ 347 (415)
T 2hqs_A 337 IAKQDLATGGV 347 (415)
T ss_dssp EEEEETTTCCE
T ss_pred EEEEECCCCCE
Confidence 99999987653
No 131
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.88 E-value=2.4e-21 Score=148.45 Aligned_cols=158 Identities=13% Similarity=0.063 Sum_probs=115.9
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccc-----c--ccee-----eeeeecCCceEEEEecCCCEEE---
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQK-----K--ALVQ-----AFVCHDQGASSLVFAPQHQLLI--- 71 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~-----~--~~~~-----~~~~~~~~v~~~~~~~~~~~l~--- 71 (213)
...++.+++++++.+++++ +.++ +++|+...... . ..+. ....+...|.+++|+|++++|+
T Consensus 36 ~~~~n~lavs~~~~~l~~~---~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~ 111 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAG---GASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACM 111 (434)
T ss_dssp CSCCBCEEEETTTTEEEEE---ETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEE
T ss_pred CCCccEEEEecCCCEEEEE---CCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEE
Confidence 3468899999999999998 4566 89987521000 0 0111 1112456799999999999999
Q ss_pred -EEcCCCcEEEEeccCce--------E---EEecccCCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccC-CceEE
Q psy7433 72 -SAGKKGDICVIDLRQRV--------I---RSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPH-EEFFV 138 (213)
Q Consensus 72 -~~~~d~~v~iwd~~~~~--------~---~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~-~~~l~ 138 (213)
+++.|+.|++||++++. . ...+.+|.. .|.+++|+|+ +.+|+
T Consensus 112 ~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~-------------------------~V~~v~~~p~~~~~la 166 (434)
T 2oit_A 112 MSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGG-------------------------MVIDMKWNPTVPSMVA 166 (434)
T ss_dssp EETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGG-------------------------SEEEEEECSSCTTEEE
T ss_pred eccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCC-------------------------ceEEEEECCCCCCEEE
Confidence 78899999999997651 1 122222333 4555666665 67899
Q ss_pred EecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCC
Q psy7433 139 TGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLP 203 (213)
Q Consensus 139 ~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~ 203 (213)
+++.||.|++||++++........|. ..|.+++|+|++ +|++++.||.|++||++
T Consensus 167 s~s~Dg~v~iwD~~~~~~~~~~~~~~----------~~v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 167 VCLADGSIAVLQVTETVKVCATLPST----------VAVTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp EEETTSCEEEEEESSSEEEEEEECGG----------GCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred EEECCCeEEEEEcCCCcceeeccCCC----------CceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 99999999999999887665555544 689999999965 69999999999999998
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.87 E-value=5.3e-20 Score=135.94 Aligned_cols=185 Identities=9% Similarity=0.076 Sum_probs=137.9
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccc-eeeeeeecCCceEEEEecCCCEEEEEcCCC---cEE
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKAL-VQAFVCHDQGASSLVFAPQHQLLISAGKKG---DIC 80 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~v~ 80 (213)
.+...+ .++|+|+++++++++ ..++.|.+||.. ..+. ...+..+..+..+++|+|++++++++..++ .|.
T Consensus 38 ~~~~~~-~~~~s~dg~~l~~~~--~~~~~i~~~d~~---~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~ 111 (331)
T 3u4y_A 38 LGYDFV-DTAITSDCSNVVVTS--DFCQTLVQIETQ---LEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQ 111 (331)
T ss_dssp CCCCEE-EEEECSSSCEEEEEE--STTCEEEEEECS---SSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEE
T ss_pred ccCCcc-eEEEcCCCCEEEEEe--CCCCeEEEEECC---CCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEE
Confidence 345566 999999999776664 458899999984 4444 555665655555599999999999655553 899
Q ss_pred EEeccCceEEEecccCCCCeeEEEecCCCCEEEEe-cCCCc-ee---------------------eceEEEEEccCCceE
Q psy7433 81 VIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTG-AGDGD-IK---------------------SPVKCLAIDPHEEFF 137 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~~~~-i~---------------------~~v~~~~~~~~~~~l 137 (213)
+||+.+++.+..+.. .....+++|+|++++++++ ..++. +. ..+..++|+|+|+++
T Consensus 112 v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l 190 (331)
T 3u4y_A 112 SYSFLKNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFA 190 (331)
T ss_dssp EEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEE
T ss_pred EEECCCCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEE
Confidence 999999988877764 4456899999999865555 44455 43 346789999999955
Q ss_pred E-EecCCCcEEEEEccCCee---eeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEE-EecCCcEEEEeCCCCcc
Q psy7433 138 V-TGAGDGDIKVWSLSGNHL---LYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFS-CGADGSMKVRQLPDRDA 207 (213)
Q Consensus 138 ~-~~~~dg~i~v~d~~~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s-~~~d~~i~iw~~~~~~~ 207 (213)
+ ++..++.|.+||+++++. +..+... ..+..++|+|++. +++ ...++.|.+||+.+++.
T Consensus 191 ~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-----------~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 191 FVANLIGNSIGILETQNPENITLLNAVGTN-----------NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp EEEETTTTEEEEEECSSTTSCEEEEEEECS-----------SCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEE
T ss_pred EEEeCCCCeEEEEECCCCcccceeeeccCC-----------CCCceEEECCCCCEEEEEEcCCCEEEEEECCCCce
Confidence 4 555689999999988777 6666543 4678899999775 544 44578899999987654
No 133
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.86 E-value=1e-19 Score=134.61 Aligned_cols=181 Identities=14% Similarity=0.149 Sum_probs=129.3
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEc-CCCcEEEEeccC-
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG-KKGDICVIDLRQ- 86 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~iwd~~~- 86 (213)
.+..++|+|++++|++++ ..++.|.+||++.......+..+.. ...+.+++|+|+++++++++ .++.|.+||+.+
T Consensus 85 ~~~~~~~s~dg~~l~~~~--~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~ 161 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGS--YNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDD 161 (343)
T ss_dssp CCSEEEECTTSSEEEEEE--TTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred CCcEEEEcCCCCEEEEEe--cCCCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCC
Confidence 788999999999887764 4588999999842223334444433 34588999999999888776 889999999987
Q ss_pred ceEEE----eccc-CCCCeeEEEecCCCCEEEEec-CCCcee---------------------------eceEEEEEccC
Q psy7433 87 RVIRS----RFNA-HESPVKCLAIDPHEEFFVTGA-GDGDIK---------------------------SPVKCLAIDPH 133 (213)
Q Consensus 87 ~~~~~----~~~~-~~~~i~~~~~~~~~~~l~~~~-~~~~i~---------------------------~~v~~~~~~~~ 133 (213)
++... .+.. ....+..++|+|+++++++++ .++.+. ..+..++|+|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~d 241 (343)
T 1ri6_A 162 GHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPD 241 (343)
T ss_dssp SCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTT
T ss_pred CceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCC
Confidence 54322 2222 345788999999999776554 556543 12336999999
Q ss_pred CceEE-EecCCCcEEEEEcc----CCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEe-cCCcEEEEeCC
Q psy7433 134 EEFFV-TGAGDGDIKVWSLS----GNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCG-ADGSMKVRQLP 203 (213)
Q Consensus 134 ~~~l~-~~~~dg~i~v~d~~----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~-~d~~i~iw~~~ 203 (213)
+++|+ +...++.|.+||+. ..+.+..+..+ ..+..++|+|++. |++++ .++.+.+|++.
T Consensus 242 g~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~-----------~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 242 GRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTE-----------TQPRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp SSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECS-----------SSCCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred CCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCC-----------CccceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 98776 55578999999997 23444444443 3478899999764 66666 68999999654
No 134
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.86 E-value=2e-19 Score=133.72 Aligned_cols=183 Identities=12% Similarity=0.126 Sum_probs=141.6
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecC---------CceEEEEecCCCEEEEEc--CC
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQ---------GASSLVFAPQHQLLISAG--KK 76 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~~~~--~d 76 (213)
..+..++|+|+++.++.+. ..++.|.+||. .+.+.+..+..+.. .+..++|+|+++++++++ .+
T Consensus 89 ~~~~~~~~s~dg~~l~v~~--~~~~~v~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 163 (353)
T 3vgz_A 89 LKPFGATINNTTQTLWFGN--TVNSAVTAIDA---KTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKE 163 (353)
T ss_dssp SCCCSEEEETTTTEEEEEE--TTTTEEEEEET---TTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSS
T ss_pred CCcceEEECCCCCEEEEEe--cCCCEEEEEeC---CCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCC
Confidence 4577899999999665553 56799999998 45555555554332 268899999999877765 47
Q ss_pred CcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee---------------------eceEEEEEccCCc
Q psy7433 77 GDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------------SPVKCLAIDPHEE 135 (213)
Q Consensus 77 ~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------------~~v~~~~~~~~~~ 135 (213)
+.|.+||..+++....+..+...+..++|+|+++.+++++.++.+. ..+..++|+|+++
T Consensus 164 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 243 (353)
T 3vgz_A 164 SVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQ 243 (353)
T ss_dssp CEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTT
T ss_pred ceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCC
Confidence 8899999999998888875666688999999999999998888765 2355689999999
Q ss_pred eEEEecC-CCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EE-EEecCCcEEEEeCCCCcc
Q psy7433 136 FFVTGAG-DGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LF-SCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 136 ~l~~~~~-dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~-s~~~d~~i~iw~~~~~~~ 207 (213)
++++++. ++.|.+||+.+++.+..+.... ...++|+|++. ++ +...++.|.+||..+++.
T Consensus 244 ~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~------------~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~ 306 (353)
T 3vgz_A 244 RAFITDSKAAEVLVVDTRNGNILAKVAAPE------------SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKV 306 (353)
T ss_dssp EEEEEESSSSEEEEEETTTCCEEEEEECSS------------CCCEEEETTTTEEEEEETTTTEEEEEETTTTEE
T ss_pred EEEEEeCCCCEEEEEECCCCcEEEEEEcCC------------CceEEECCCCCEEEEEECCCCeEEEEECCCCeE
Confidence 7666654 5899999999988887776532 24588998753 54 444789999999987754
No 135
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.86 E-value=8.1e-19 Score=130.56 Aligned_cols=188 Identities=10% Similarity=0.102 Sum_probs=130.1
Q ss_pred ccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeee---------cCCceEEEEecCCCEEEEEc
Q psy7433 4 QCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCH---------DQGASSLVFAPQHQLLISAG 74 (213)
Q Consensus 4 ~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~---------~~~v~~~~~~~~~~~l~~~~ 74 (213)
..+...+..++|+|+|++|++++ ..++.|.+|++........+..+... ...+.+++|+|+++++++..
T Consensus 82 ~~~~~~p~~~a~spdg~~l~~~~--~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~ 159 (347)
T 3hfq_A 82 VAPGTPPAYVAVDEARQLVYSAN--YHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDL 159 (347)
T ss_dssp EEESCCCSEEEEETTTTEEEEEE--TTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEET
T ss_pred ecCCCCCEEEEECCCCCEEEEEe--CCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeC
Confidence 34677889999999999888884 37899999998432233333333211 12477899999999666677
Q ss_pred CCCcEEEEecc-CceEE--Eeccc-CCCCeeEEEecCCCCEEEEe-cCCCcee---------------------------
Q psy7433 75 KKGDICVIDLR-QRVIR--SRFNA-HESPVKCLAIDPHEEFFVTG-AGDGDIK--------------------------- 122 (213)
Q Consensus 75 ~d~~v~iwd~~-~~~~~--~~~~~-~~~~i~~~~~~~~~~~l~~~-~~~~~i~--------------------------- 122 (213)
.++.|.+||+. +++.. ..+.. ....+..++|+|++++++++ ..++.+.
T Consensus 160 ~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~ 239 (347)
T 3hfq_A 160 GSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAH 239 (347)
T ss_dssp TTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSC
T ss_pred CCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCC
Confidence 78899999998 45332 22222 23367889999999966664 4444433
Q ss_pred eceEEEEEccCCceE-EEecCCCcEEEEEccC---CeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEec-CCc
Q psy7433 123 SPVKCLAIDPHEEFF-VTGAGDGDIKVWSLSG---NHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGA-DGS 196 (213)
Q Consensus 123 ~~v~~~~~~~~~~~l-~~~~~dg~i~v~d~~~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~-d~~ 196 (213)
..+..++|+|+|++| ++...++.|.+||+.. .+.+..+..+. ..+..++|+|++. |++++. ++.
T Consensus 240 ~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~----------~~~~~~~~spdg~~l~v~~~~~~~ 309 (347)
T 3hfq_A 240 NGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEG----------DFPRDFDLDPTEAFVVVVNQNTDN 309 (347)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSS----------SCCCEEEECTTSSEEEEEETTTTE
T ss_pred CcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCC----------CCcCeEEECCCCCEEEEEEcCCCc
Confidence 126679999999977 4555689999999962 24444444432 4678999999764 766665 589
Q ss_pred EEEEeCC
Q psy7433 197 MKVRQLP 203 (213)
Q Consensus 197 i~iw~~~ 203 (213)
|.+|++.
T Consensus 310 v~v~~~d 316 (347)
T 3hfq_A 310 ATLYARD 316 (347)
T ss_dssp EEEEEEC
T ss_pred EEEEEEe
Confidence 9999554
No 136
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.86 E-value=2.9e-19 Score=131.90 Aligned_cols=178 Identities=12% Similarity=0.081 Sum_probs=137.2
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeee-----ecCCceEEEEecCCCEEEEEc---------
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVC-----HDQGASSLVFAPQHQLLISAG--------- 74 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~--------- 74 (213)
.+..++|+|+++.++.++ ..++.|.+||+ .+.+.+..+.. +...+..++|+|++++|++++
T Consensus 35 ~~~~~~~s~dg~~l~v~~--~~~~~v~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 109 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATV--NKSESLVKIDL---VTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTH 109 (337)
T ss_dssp CCCCEEECTTSSEEEEEE--TTTTEEEEEET---TTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSC
T ss_pred CccceEEcCCCCEEEEEe--CCCCeEEEEEC---CCCCeEeeEEcCCcccccccccceEECCCCCEEEEEeccccccccc
Confidence 478899999998765543 57889999998 44555554442 122678899999999998885
Q ss_pred ---CCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------e------------
Q psy7433 75 ---KKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------S------------ 123 (213)
Q Consensus 75 ---~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------~------------ 123 (213)
.++.|.+||+.+++.+..+.. ...+.+++|+|+++++++++ +.+. .
T Consensus 110 ~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~ 186 (337)
T 1pby_B 110 FEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGLG--RDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVL 186 (337)
T ss_dssp EEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEES--SSEEEEETTTTEEEEEECSTTTTTTTBCCCBCC
T ss_pred ccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEeC--CeEEEEECCCCcEeeeeeccccCCCceeCCCcc
Confidence 579999999999888777764 45678899999999777763 3332 0
Q ss_pred -------------------------------------------------------ceEEEEEccCCceEEEecCCCcEEE
Q psy7433 124 -------------------------------------------------------PVKCLAIDPHEEFFVTGAGDGDIKV 148 (213)
Q Consensus 124 -------------------------------------------------------~v~~~~~~~~~~~l~~~~~dg~i~v 148 (213)
.+.+++|+|++++++++ ++.|.+
T Consensus 187 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~ 264 (337)
T 1pby_B 187 AVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLES 264 (337)
T ss_dssp CCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEE
T ss_pred EEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEE
Confidence 12358999999988888 689999
Q ss_pred EEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 149 WSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 149 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
||+.+++.+..+..+ ..+.+++|+|++ +|++++.++.|++||+.+++.
T Consensus 265 ~d~~~~~~~~~~~~~-----------~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~ 313 (337)
T 1pby_B 265 FDLEKNASIKRVPLP-----------HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEK 313 (337)
T ss_dssp EETTTTEEEEEEECS-----------SCCCEEEECTTSCEEEEESBSSEEEEEETTTCCE
T ss_pred EECCCCcCcceecCC-----------CceeeEEECCCCCEEEEEcCCCcEEEEECcCCcE
Confidence 999988887777654 357889999965 577888899999999988754
No 137
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.85 E-value=3.5e-19 Score=131.79 Aligned_cols=191 Identities=10% Similarity=0.090 Sum_probs=131.4
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCc-ccccceeeeeeecCCceEEEEecCCCEEEEEc-CCCcEEEE
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLP-QKKALVQAFVCHDQGASSLVFAPQHQLLISAG-KKGDICVI 82 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~iw 82 (213)
.|...+.+++|+|++++|++++ ..++.|.+|+++.. .....+..+..+ ..+..++|+|++++|++++ .++.|.+|
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~i~~~ 111 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGV--RPEFRVLAYRIAPDDGALTFAAESALP-GSLTHISTDHQGQFVFVGSYNAGNVSVT 111 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEE--TTTTEEEEEEECTTTCCEEEEEEEECS-SCCSEEEECTTSSEEEEEETTTTEEEEE
T ss_pred ecCCCCceEEECCCCCEEEEee--cCCCeEEEEEecCCCCceeeccccccC-CCCcEEEEcCCCCEEEEEecCCCeEEEE
Confidence 3567788999999999888884 33499999998411 122334444433 3789999999999886665 48889999
Q ss_pred ec---cCceEEEecccCCCCeeEEEecCCCCEEEEec-CCCcee-----------------------eceEEEEEccCCc
Q psy7433 83 DL---RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGA-GDGDIK-----------------------SPVKCLAIDPHEE 135 (213)
Q Consensus 83 d~---~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~~~~i~-----------------------~~v~~~~~~~~~~ 135 (213)
|+ .+.+....+. ....+.+++|+|+++.+++++ .++.+. ..+..++|+|+++
T Consensus 112 d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~ 190 (343)
T 1ri6_A 112 RLEDGLPVGVVDVVE-GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQ 190 (343)
T ss_dssp EEETTEEEEEEEEEC-CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSS
T ss_pred ECCCCcccccccccc-CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCC
Confidence 99 4445555554 344688999999999877776 555543 2456789999999
Q ss_pred eEEEe-cCCCcEEEEEccC--Cee--eeeecCCCCceeEEEecCCCeEEEEeCCCC-eEE-EEecCCcEEEEeCC
Q psy7433 136 FFVTG-AGDGDIKVWSLSG--NHL--LYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLF-SCGADGSMKVRQLP 203 (213)
Q Consensus 136 ~l~~~-~~dg~i~v~d~~~--~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~-s~~~d~~i~iw~~~ 203 (213)
+++++ ..++.|.+||+.. ++. .......... ......+..++|+|++ +|+ +...++.|.+|++.
T Consensus 191 ~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 191 YAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPEN----FSDTRWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp EEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTT----CCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCcc----ccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 66554 5789999999953 322 2222111000 0001357789999976 454 55578999999998
No 138
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.85 E-value=3.2e-20 Score=150.89 Aligned_cols=184 Identities=13% Similarity=0.049 Sum_probs=136.3
Q ss_pred cCceEEEEEeCCCCeEEEeeccCC-Cc-----cEEEEeCCCcccccceeeeeeec------------------------C
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSE-SK-----NVCLWDSLLPQKKALVQAFVCHD------------------------Q 56 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~-~~-----~i~iwd~~~~~~~~~~~~~~~~~------------------------~ 56 (213)
...+.+++|+|||++|+++ +. ++ .|++||+. .++....+..+. .
T Consensus 36 ~~~~~~~~~SpdG~~la~~---~~~d~~~~~~~i~~~d~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFL---RGKDSDRNQLDLWSYDIG---SGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMT 109 (741)
T ss_dssp CCCCEEEEECTTSSEEEEE---ECCSSCTTEEEEEEEETT---TCCEEEEECGGGTC--------------------CCE
T ss_pred CCCCCCceEecCCCEEEEE---eccCCCCcccEEEEEECC---CCceeEccchhhcccccccccchhhhhhhhhhhcccc
Confidence 4569999999999999998 45 77 89999984 343333333322 2
Q ss_pred CceEEEEecCCCEEEEEcCCCcEEEEeccCce--EEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------
Q psy7433 57 GASSLVFAPQHQLLISAGKKGDICVIDLRQRV--IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------ 122 (213)
Q Consensus 57 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------ 122 (213)
.+..++|+|+|++|++++. +.|.+||+.++. ....+..+...+..++|+|+|+.|+.++.+ .+.
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~-~i~~~d~~~g~~~~~ 187 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGR-NLWVIDLASGRQMQL 187 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETT-EEEEEETTTTEEEEC
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCC-cEEEEecCCCCEEEe
Confidence 3789999999999999876 899999999872 344566677889999999999999988754 443
Q ss_pred ----ec-----------------eEEEEEccCCceEEEecCCC---------------------------------cEEE
Q psy7433 123 ----SP-----------------VKCLAIDPHEEFFVTGAGDG---------------------------------DIKV 148 (213)
Q Consensus 123 ----~~-----------------v~~~~~~~~~~~l~~~~~dg---------------------------------~i~v 148 (213)
.. +..+.|+|||++|++++.|+ .|.+
T Consensus 188 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~ 267 (741)
T 2ecf_A 188 TADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGV 267 (741)
T ss_dssp CCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEE
T ss_pred ccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEE
Confidence 10 47799999999999987665 7888
Q ss_pred EEccC-CeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEec-----CCcEEEEeCCCCcc
Q psy7433 149 WSLSG-NHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGA-----DGSMKVRQLPDRDA 207 (213)
Q Consensus 149 ~d~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~-----d~~i~iw~~~~~~~ 207 (213)
||+.+ ++......... +...+..++| |++. |+.++. +..|++||+.+++.
T Consensus 268 ~d~~~~~~~~~~~~~~~--------~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~ 324 (741)
T 2ecf_A 268 ISPAEQAQTQWIDLGKE--------QDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQ 324 (741)
T ss_dssp ECSSTTCCCEEECCCSC--------SSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCE
T ss_pred EECCCCCceEEecCCCC--------cceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCce
Confidence 89877 66543332200 1257899999 9764 665543 56899999987653
No 139
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.85 E-value=1.3e-20 Score=152.69 Aligned_cols=187 Identities=8% Similarity=0.063 Sum_probs=135.2
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecC---CceEEEEecCCCEEEEEcCC--------
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQ---GASSLVFAPQHQLLISAGKK-------- 76 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~d-------- 76 (213)
..+.+++|+|+|++++++ .|+.|++||+ .+++....+..|.. .+.+++|||||++|++++.+
T Consensus 17 ~~~~~~~~spdg~~~~~~----~dg~i~~~d~---~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~ 89 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYRE----QKGTVRLWNV---ETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSY 89 (723)
T ss_dssp CCCCCCCBSSSSCBCCCC----SSSCEEEBCG---GGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCC
T ss_pred ccccccEEcCCCcEEEEe----CCCCEEEEEC---CCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecc
Confidence 347789999999977654 7899999998 45555555555543 48999999999999998764
Q ss_pred -CcEEEEeccCceEEEecc---cCCCCeeEEEecCCCCEEEEecCCCcee-----------------ece----------
Q psy7433 77 -GDICVIDLRQRVIRSRFN---AHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPV---------- 125 (213)
Q Consensus 77 -~~v~iwd~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v---------- 125 (213)
+.+.+||+.+++. ..+. .+...+..++|+|+|+.|+.++. +.+. ..+
T Consensus 90 ~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~ 167 (723)
T 1xfd_A 90 TGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLY 167 (723)
T ss_dssp CSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHH
T ss_pred eeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeE
Confidence 7888999998875 3333 33445889999999999998876 3333 112
Q ss_pred --------EEEEEccCCceEEEecCCC----------------------------------cEEEEEccCCeeeeeecCC
Q psy7433 126 --------KCLAIDPHEEFFVTGAGDG----------------------------------DIKVWSLSGNHLLYNFPGE 163 (213)
Q Consensus 126 --------~~~~~~~~~~~l~~~~~dg----------------------------------~i~v~d~~~~~~~~~~~~~ 163 (213)
.+++|+|||++|+.++.++ .|++||+.+++....+..+
T Consensus 168 ~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~ 247 (723)
T 1xfd_A 168 EEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPP 247 (723)
T ss_dssp HHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCC
T ss_pred EEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCC
Confidence 6899999999999887543 7889998877754555443
Q ss_pred CCceeEEEecCCCeEEEEeCCCCe-EEEEec----CCcEEEEeCCCCcc
Q psy7433 164 HARSSFFKHIGQGVTQLHVDGGSR-LFSCGA----DGSMKVRQLPDRDA 207 (213)
Q Consensus 164 ~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~----d~~i~iw~~~~~~~ 207 (213)
... ..+...+..++|+|++. +++... +..|++||+.+++.
T Consensus 248 ~~~----~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~ 292 (723)
T 1xfd_A 248 DDP----RMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVC 292 (723)
T ss_dssp CCG----GGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCE
T ss_pred ccC----CCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcc
Confidence 100 00125689999999886 445432 35799999987653
No 140
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.85 E-value=1.6e-18 Score=128.91 Aligned_cols=192 Identities=15% Similarity=0.105 Sum_probs=143.9
Q ss_pred ccCceEEEEEeCCCCeEEEeeccC----CCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEE-EEcCCCcEE
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHSS----ESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLI-SAGKKGDIC 80 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~s----~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~ 80 (213)
....+..++|+|+++.++++.... .++.|.+||. .+.+.+..+.. ...+..++|+|++++++ +...++.|.
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~---~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~ 114 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDP---VTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVT 114 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECT---TTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcC---CCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEE
Confidence 345688999999999888874211 1678999998 45556666553 45578899999998555 555679999
Q ss_pred EEeccCceEEEecccCCCC---------eeEEEecCCCCEEEEec--CCCcee-----------------eceEEEEEcc
Q psy7433 81 VIDLRQRVIRSRFNAHESP---------VKCLAIDPHEEFFVTGA--GDGDIK-----------------SPVKCLAIDP 132 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~~~---------i~~~~~~~~~~~l~~~~--~~~~i~-----------------~~v~~~~~~~ 132 (213)
+||..+++.+..+..+... +.+++|+|+++.+++++ .++.+. ..+..++|+|
T Consensus 115 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~ 194 (353)
T 3vgz_A 115 AIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDS 194 (353)
T ss_dssp EEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEET
T ss_pred EEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECC
Confidence 9999999887777654322 68899999999877766 355554 3377899999
Q ss_pred CCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEe-cCCcEEEEeCCCCcc
Q psy7433 133 HEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCG-ADGSMKVRQLPDRDA 207 (213)
Q Consensus 133 ~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~-~d~~i~iw~~~~~~~ 207 (213)
+++++++++.++.|.+||+.+++....+...... ....+..++|+|++ ++++++ .++.|.+||..+++.
T Consensus 195 dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~------~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~ 265 (353)
T 3vgz_A 195 EGKRLYTTNADGELITIDTADNKILSRKKLLDDG------KEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNI 265 (353)
T ss_dssp TTTEEEEECTTSEEEEEETTTTEEEEEEECCCSS------SCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCE
T ss_pred CCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCC------CCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcE
Confidence 9999999999999999999999888777652210 01468889999965 455544 558999999987754
No 141
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.84 E-value=1.4e-18 Score=136.54 Aligned_cols=183 Identities=11% Similarity=0.066 Sum_probs=136.3
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec----CCCEEEEEcC-CCcEEEEec
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP----QHQLLISAGK-KGDICVIDL 84 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~l~~~~~-d~~v~iwd~ 84 (213)
+..++|+|+|++|+++ +.++.|.+||+.. .+.+.+..+. +...+..++|+| +++++++++. ++.|.+||.
T Consensus 181 ~~~v~~spdg~~l~v~---~~d~~V~v~D~~~-~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~ 255 (543)
T 1nir_A 181 VHISRMSASGRYLLVI---GRDARIDMIDLWA-KEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDG 255 (543)
T ss_dssp EEEEEECTTSCEEEEE---ETTSEEEEEETTS-SSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEET
T ss_pred cceEEECCCCCEEEEE---CCCCeEEEEECcC-CCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEec
Confidence 8899999999999999 5789999999821 2345666666 455679999999 9999999884 899999999
Q ss_pred cCceEEEecccC-----------CCCeeEEEecCCCCEE-EEecCCCcee------------------eceEEEEEccCC
Q psy7433 85 RQRVIRSRFNAH-----------ESPVKCLAIDPHEEFF-VTGAGDGDIK------------------SPVKCLAIDPHE 134 (213)
Q Consensus 85 ~~~~~~~~~~~~-----------~~~i~~~~~~~~~~~l-~~~~~~~~i~------------------~~v~~~~~~~~~ 134 (213)
.+++++..+..+ ...+..+.++|++..+ ++...++.+. ..+..+.|+|+|
T Consensus 256 ~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg 335 (543)
T 1nir_A 256 ETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSH 335 (543)
T ss_dssp TTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTS
T ss_pred cccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCC
Confidence 999888877542 2268899999977654 4555566553 235578999999
Q ss_pred ceEEEe-cCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC-Ce-EEEEe-cCCcEEEEeCCC
Q psy7433 135 EFFVTG-AGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG-SR-LFSCG-ADGSMKVRQLPD 204 (213)
Q Consensus 135 ~~l~~~-~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~-l~s~~-~d~~i~iw~~~~ 204 (213)
++++++ ..++.|.+||+++++++..+.....+ |.+....+ ++|+ +. ++++. .|++|.+||+.+
T Consensus 336 ~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~p------h~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 336 RYFMTAANNSNKVAVIDSKDRRLSALVDVGKTP------HPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp CEEEEEEGGGTEEEEEETTTTEEEEEEECSSSB------CCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred CEEEEEecCCCeEEEEECCCCeEEEeeccCCCC------CCCCCccc-CCCCCccEEEeccCCCceEEEEEeCC
Confidence 976655 56889999999999998887753211 01222223 3564 54 56665 589999999987
No 142
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.83 E-value=6.1e-19 Score=138.66 Aligned_cols=175 Identities=13% Similarity=0.155 Sum_probs=138.3
Q ss_pred EEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEec--cCceEEE
Q psy7433 14 VFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL--RQRVIRS 91 (213)
Q Consensus 14 ~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~--~~~~~~~ 91 (213)
.++|++.++++. +.+++|.+||. .+++++..+..+.. +..++|+|++++|++++.|+.|.+||+ .+++.+.
T Consensus 144 ~~~p~~~~~vs~---~~d~~V~v~D~---~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~ 216 (543)
T 1nir_A 144 DLDLPNLFSVTL---RDAGQIALVDG---DSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVA 216 (543)
T ss_dssp CCCGGGEEEEEE---GGGTEEEEEET---TTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEE
T ss_pred ccCCCCEEEEEE---cCCCeEEEEEC---CCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEE
Confidence 378999888887 68999999998 56777777764333 889999999999999999999999999 8888888
Q ss_pred ecccCCCCeeEEEecC----CCCEEEEecC-CCcee----------------e------------ceEEEEEccCCc-eE
Q psy7433 92 RFNAHESPVKCLAIDP----HEEFFVTGAG-DGDIK----------------S------------PVKCLAIDPHEE-FF 137 (213)
Q Consensus 92 ~~~~~~~~i~~~~~~~----~~~~l~~~~~-~~~i~----------------~------------~v~~~~~~~~~~-~l 137 (213)
.+. +...+..++|+| +++++++++. ++.+. . .+..+.++|+++ ++
T Consensus 217 ~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~ 295 (543)
T 1nir_A 217 EIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFI 295 (543)
T ss_dssp EEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEE
T ss_pred EEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEE
Confidence 887 455679999999 9999998874 55553 0 467889999766 66
Q ss_pred EEecCCCcEEEEEccCCeeee--eecCCCCceeEEEecCCCeEEEEeCCCCe-EE-EEecCCcEEEEeCCCCcc
Q psy7433 138 VTGAGDGDIKVWSLSGNHLLY--NFPGEHARSSFFKHIGQGVTQLHVDGGSR-LF-SCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 138 ~~~~~dg~i~v~d~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~-s~~~d~~i~iw~~~~~~~ 207 (213)
++...++.|.+||+.+.+.+. .+.. +..+..+.|+|+++ ++ ++..++.|.+||..+++.
T Consensus 296 vs~~~~g~i~vvd~~~~~~l~~~~i~~-----------~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l 358 (543)
T 1nir_A 296 VNVKETGKVLLVNYKDIDNLTVTSIGA-----------APFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRL 358 (543)
T ss_dssp EEETTTTEEEEEECTTSSSCEEEEEEC-----------CSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEE
T ss_pred EEECCCCeEEEEEecCCCcceeEEecc-----------CcCccCceECCCCCEEEEEecCCCeEEEEECCCCeE
Confidence 677888999999998755433 3322 24677899999765 54 445689999999998754
No 143
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.83 E-value=1.7e-18 Score=125.25 Aligned_cols=160 Identities=11% Similarity=0.135 Sum_probs=122.6
Q ss_pred CCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccC-ceEEEecccC-CCCeeEEEec
Q psy7433 29 SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQ-RVIRSRFNAH-ESPVKCLAID 106 (213)
Q Consensus 29 s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~-~~~~~~~~~~-~~~i~~~~~~ 106 (213)
+.++.|++||++ ..+. ..+..|...+.+++|+|++++|++++ ++.|.+||+.+ ++.......+ ...+.+++|+
T Consensus 19 ~~~~~i~~~d~~---~~~~-~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s 93 (297)
T 2ojh_A 19 SMRSSIEIFNIR---TRKM-RVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGIS 93 (297)
T ss_dssp CCCEEEEEEETT---TTEE-EEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEEC
T ss_pred CcceeEEEEeCC---CCce-eeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEEC
Confidence 578999999983 3333 34556888999999999999999986 78999999999 8776666554 3678999999
Q ss_pred CCCCEEEEecCC--Ccee-----------------eceEEEEEccCCceEE-EecCCCcEEEEEccC-CeeeeeecCCCC
Q psy7433 107 PHEEFFVTGAGD--GDIK-----------------SPVKCLAIDPHEEFFV-TGAGDGDIKVWSLSG-NHLLYNFPGEHA 165 (213)
Q Consensus 107 ~~~~~l~~~~~~--~~i~-----------------~~v~~~~~~~~~~~l~-~~~~dg~i~v~d~~~-~~~~~~~~~~~~ 165 (213)
|+++.+++++.+ +... ..+..++|+|++++|+ +++.++.+++|++.. ......+..+.
T Consensus 94 pdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~- 172 (297)
T 2ojh_A 94 PDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGE- 172 (297)
T ss_dssp TTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSS-
T ss_pred CCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCC-
Confidence 999999998833 2222 4578889999999777 778899999998742 22333443333
Q ss_pred ceeEEEecCCCeEEEEeCCCCe-EEEEe-cCCcEEEEeCC
Q psy7433 166 RSSFFKHIGQGVTQLHVDGGSR-LFSCG-ADGSMKVRQLP 203 (213)
Q Consensus 166 ~~~~~~~~~~~v~~~~~~~~~~-l~s~~-~d~~i~iw~~~ 203 (213)
..+.++.|+|++. |+.++ .++.+++|++.
T Consensus 173 ---------~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~ 203 (297)
T 2ojh_A 173 ---------GRNDGPDYSPDGRWIYFNSSRTGQMQIWRVR 203 (297)
T ss_dssp ---------SCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred ---------CccccceECCCCCEEEEEecCCCCccEEEEC
Confidence 5789999999764 55555 58999999886
No 144
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.82 E-value=6.3e-18 Score=125.74 Aligned_cols=194 Identities=12% Similarity=0.167 Sum_probs=130.6
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEc-CCCcEEEEe
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG-KKGDICVID 83 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~iwd 83 (213)
.+...+..++|+|+|+ |++++....++.|.+|++.. ...+.+..+..+...+..++|+|++++|++++ .++.+.+|+
T Consensus 37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~-g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~ 114 (347)
T 3hfq_A 37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDG-QTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMK 114 (347)
T ss_dssp EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEET-TEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecC-CcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEE
Confidence 3556678899999999 55442101268999999832 22334555556778899999999999888877 678999999
Q ss_pred ccC-c--eEEEecccC---------CCCeeEEEecCCCCEEEEecCCCcee---------------------eceEEEEE
Q psy7433 84 LRQ-R--VIRSRFNAH---------ESPVKCLAIDPHEEFFVTGAGDGDIK---------------------SPVKCLAI 130 (213)
Q Consensus 84 ~~~-~--~~~~~~~~~---------~~~i~~~~~~~~~~~l~~~~~~~~i~---------------------~~v~~~~~ 130 (213)
+.. + +.+..+... ...+.+++|+|+++.+++...++.+. ..+..++|
T Consensus 115 ~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~ 194 (347)
T 3hfq_A 115 IAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVF 194 (347)
T ss_dssp ECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEE
T ss_pred eCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEE
Confidence 963 2 333333211 12478899999999666555565553 24567899
Q ss_pred ccCCceEEE-ecCCCcEEEEEccC--Cee--eeeecCCCCceeEEEecCCCeEEEEeCCCCe-E-EEEecCCcEEEEeCC
Q psy7433 131 DPHEEFFVT-GAGDGDIKVWSLSG--NHL--LYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-L-FSCGADGSMKVRQLP 203 (213)
Q Consensus 131 ~~~~~~l~~-~~~dg~i~v~d~~~--~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l-~s~~~d~~i~iw~~~ 203 (213)
+|+|+++++ ...++.|.+|++.. ++. +..+...... ......+..++|+|++. | ++...++.|.+|++.
T Consensus 195 spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~----~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 195 SPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPAD----YTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVT 270 (347)
T ss_dssp CTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTT----CCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred CCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCC----CCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEEC
Confidence 999996555 56788999999874 432 2222221100 00013588999999874 5 555678999999997
Q ss_pred C
Q psy7433 204 D 204 (213)
Q Consensus 204 ~ 204 (213)
.
T Consensus 271 ~ 271 (347)
T 3hfq_A 271 A 271 (347)
T ss_dssp G
T ss_pred C
Confidence 3
No 145
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.82 E-value=2.9e-18 Score=127.21 Aligned_cols=177 Identities=8% Similarity=-0.008 Sum_probs=130.8
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeee------cCCceEEEEecCCCEEEEEcCC------
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCH------DQGASSLVFAPQHQLLISAGKK------ 76 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~d------ 76 (213)
.+..++|+|+++.++.++ ..++.|.+||+ .+.+.+..+... ...+..++|+|++++|++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~--~~~~~i~~~d~---~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 118 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLN--NHYGDIYGIDL---DTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLND 118 (349)
T ss_dssp SSCEEEECTTSSEEEEEE--TTTTEEEEEET---TTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSS
T ss_pred CCceeEECCCCCEEEEEe--CCCCcEEEEeC---CCCcEEEEEEcccccccccccccceEECCCCCEEEEEccccccccc
Confidence 578899999998665543 57899999998 445555444422 2337899999999999988865
Q ss_pred ------CcEEEEeccCceE---EEecccCCCCeeEEEecCCCCEEEEecCCCcee---------------e---------
Q psy7433 77 ------GDICVIDLRQRVI---RSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------S--------- 123 (213)
Q Consensus 77 ------~~v~iwd~~~~~~---~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------~--------- 123 (213)
+.|.+||+.+++. +..+. +...+.+++|+|+++ +++++.+ +. .
T Consensus 119 ~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~~~--i~~~d~~~~~~~~~~~~~~~~~~~~~~ 194 (349)
T 1jmx_B 119 HYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAGPD--IYKMDVKTGKYTVALPLRNWNRKGYSA 194 (349)
T ss_dssp CEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEESSS--EEEECTTTCCEEEEECSTTCCCTTBCC
T ss_pred ccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEEccCc--EEEEeCCCCceeccccccccCCccccC
Confidence 8999999988533 22333 344688999999998 5544432 21 1
Q ss_pred -------------------------------------------------------------ceEEEEEcc-CCceEEEec
Q psy7433 124 -------------------------------------------------------------PVKCLAIDP-HEEFFVTGA 141 (213)
Q Consensus 124 -------------------------------------------------------------~v~~~~~~~-~~~~l~~~~ 141 (213)
.+..++|+| ++++++++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~- 273 (349)
T 1jmx_B 195 PDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV- 273 (349)
T ss_dssp CBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-
T ss_pred ccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-
Confidence 123556779 99988888
Q ss_pred CCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 142 GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 142 ~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
++.|.+||+++++.+..+... ..+.+++|+|++ +|++++.++.|++||+.+.+.
T Consensus 274 -~~~v~~~d~~~~~~~~~~~~~-----------~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~ 328 (349)
T 1jmx_B 274 -LNRLAKYDLKQRKLIKAANLD-----------HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEK 328 (349)
T ss_dssp -ESEEEEEETTTTEEEEEEECS-----------SCCCEEEECSSSSCEEEESBSSEEEEEETTTTEE
T ss_pred -cCeEEEEECccCeEEEEEcCC-----------CCccceEECCCCCEEEEecCCCeEEEEeccccce
Confidence 889999999999888777653 356789999975 577788899999999988754
No 146
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.82 E-value=7.6e-19 Score=142.13 Aligned_cols=187 Identities=13% Similarity=0.127 Sum_probs=133.4
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCc--ccccceeeeeeecCC--------------ceEEEEecCCC
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLP--QKKALVQAFVCHDQG--------------ASSLVFAPQHQ 68 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~--~~~~~~~~~~~~~~~--------------v~~~~~~~~~~ 68 (213)
.+...+.+++|+|+|+.|+++ .++.|++||+... ..++.......+... +.++.|+|+|+
T Consensus 118 ~~~~~~~~~~~SpdG~~la~~----~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~ 193 (706)
T 2z3z_A 118 DTNEETASLDFSPVGDRVAYV----RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGS 193 (706)
T ss_dssp CCTTCCTTCEECTTSSEEEEE----ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSS
T ss_pred CCcccccCCcCCCCCCEEEEE----ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCC
Confidence 456678889999999999997 5799999998430 003333222222222 48899999999
Q ss_pred EEEEEc---------------------------------CCCcEEEEeccCceEEEecc--cCCCCeeEEEecCCCCEEE
Q psy7433 69 LLISAG---------------------------------KKGDICVIDLRQRVIRSRFN--AHESPVKCLAIDPHEEFFV 113 (213)
Q Consensus 69 ~l~~~~---------------------------------~d~~v~iwd~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~ 113 (213)
+|++++ .+..|.+||+.+++...... .+...+.+++|+|+++.++
T Consensus 194 ~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~ 273 (706)
T 2z3z_A 194 CLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILY 273 (706)
T ss_dssp EEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEE
T ss_pred EEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEE
Confidence 999887 44679999999887654442 3556789999999999988
Q ss_pred EecCCC-----cee----------------------eceEEEEEcc--CCceEEEecCCCcEEEEEcc-CCeeeeeecCC
Q psy7433 114 TGAGDG-----DIK----------------------SPVKCLAIDP--HEEFFVTGAGDGDIKVWSLS-GNHLLYNFPGE 163 (213)
Q Consensus 114 ~~~~~~-----~i~----------------------~~v~~~~~~~--~~~~l~~~~~dg~i~v~d~~-~~~~~~~~~~~ 163 (213)
+++.++ .+. ..+..+.|+| +|+++++++.++.+++|++. ++..+..+..+
T Consensus 274 ~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~ 353 (706)
T 2z3z_A 274 VAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKG 353 (706)
T ss_dssp EEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCS
T ss_pred EEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCC
Confidence 876554 221 0124579999 99999999999999999886 56666666554
Q ss_pred CCceeEEEecCCCeEE-EEeCCCC-eEEE-EecCC----cEEEEeCCCC
Q psy7433 164 HARSSFFKHIGQGVTQ-LHVDGGS-RLFS-CGADG----SMKVRQLPDR 205 (213)
Q Consensus 164 ~~~~~~~~~~~~~v~~-~~~~~~~-~l~s-~~~d~----~i~iw~~~~~ 205 (213)
. ..+.. ++|+|++ .|+. ++.++ .|..||+.++
T Consensus 354 ~----------~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~ 392 (706)
T 2z3z_A 354 E----------WEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGG 392 (706)
T ss_dssp S----------SCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCC
T ss_pred C----------eEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCC
Confidence 3 45766 7999976 4544 44444 5666676654
No 147
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.82 E-value=8.8e-18 Score=124.01 Aligned_cols=181 Identities=9% Similarity=0.175 Sum_probs=126.7
Q ss_pred EEeCCCCe-EEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcC-CCcEEEEeccCceE-E
Q psy7433 14 VFLGSCSL-VATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGK-KGDICVIDLRQRVI-R 90 (213)
Q Consensus 14 ~~~~~~~~-l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~v~iwd~~~~~~-~ 90 (213)
.|.+++.. +++. +.++.|.+||. .+++.+..+..+...+ .++|+|+++++++++. ++.|.+||+.+++. .
T Consensus 4 ~~~~~~~~~~v~~---~~~~~v~~~d~---~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~ 76 (331)
T 3u4y_A 4 MFQTTSNFGIVVE---QHLRRISFFST---DTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKV 76 (331)
T ss_dssp ---CCCCEEEEEE---GGGTEEEEEET---TTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEE
T ss_pred eEcCCCCEEEEEe---cCCCeEEEEeC---cccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeE
Confidence 45565555 5555 68899999998 4555666665555556 9999999997666554 88999999999887 6
Q ss_pred EecccCCCCeeEEEecCCCCEEEEecCCC---cee----------------eceEEEEEccCCceEEEe-cCCCc-EEEE
Q psy7433 91 SRFNAHESPVKCLAIDPHEEFFVTGAGDG---DIK----------------SPVKCLAIDPHEEFFVTG-AGDGD-IKVW 149 (213)
Q Consensus 91 ~~~~~~~~~i~~~~~~~~~~~l~~~~~~~---~i~----------------~~v~~~~~~~~~~~l~~~-~~dg~-i~v~ 149 (213)
..+..+..+..+++|+|++++++++..++ .+. ..+.+++|+|+|++++++ ..++. |.+|
T Consensus 77 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~ 156 (331)
T 3u4y_A 77 VAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRF 156 (331)
T ss_dssp EEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEE
T ss_pred EecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEE
Confidence 66666666665699999999998666553 554 456899999999855554 55578 9999
Q ss_pred EccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-E-EEEecCCcEEEEeCCCCcc
Q psy7433 150 SLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-L-FSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 150 d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l-~s~~~d~~i~iw~~~~~~~ 207 (213)
++.....+..... . ....+..+..++|+|++. + ++...++.|++||+.+++.
T Consensus 157 ~~~~~g~~~~~~~-~-----~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 157 KIDADGVLFDTGQ-E-----FISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN 210 (331)
T ss_dssp EECTTCCEEEEEE-E-----EECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS
T ss_pred EECCCCcEeecCC-c-----cccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc
Confidence 9865333211110 0 001125689999999774 4 4455688999999987754
No 148
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.82 E-value=6.2e-19 Score=142.62 Aligned_cols=181 Identities=10% Similarity=0.082 Sum_probs=130.1
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccC-
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQ- 86 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~- 86 (213)
..|.+++|+|+ ..++.+ .++.|++||+. .++. ..+..+...+..++|+|+|++|+++ .++.|++||+.+
T Consensus 82 ~~v~~~~~spd-~~~~~~----~~~~i~~~d~~---~~~~-~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~ 151 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF----TQGGLVGFDML---ARKV-TYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKL 151 (706)
T ss_dssp CCCEEEEETTT-TEEEEE----ETTEEEEEETT---TTEE-EEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCT
T ss_pred cCceeEEECCC-CeEEEE----ECCEEEEEECC---CCce-EEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcc
Confidence 56999999999 665555 36999999983 3333 3344566778999999999999986 679999999998
Q ss_pred ----ceEEEecccCCCC--------------eeEEEecCCCCEEEEecCC------------------------------
Q psy7433 87 ----RVIRSRFNAHESP--------------VKCLAIDPHEEFFVTGAGD------------------------------ 118 (213)
Q Consensus 87 ----~~~~~~~~~~~~~--------------i~~~~~~~~~~~l~~~~~~------------------------------ 118 (213)
++........... +.+++|+||+++|++++.|
T Consensus 152 ~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~ 231 (706)
T 2z3z_A 152 GEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTP 231 (706)
T ss_dssp TSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSC
T ss_pred cccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCC
Confidence 7766544433332 4899999999999988721
Q ss_pred ---Ccee-------------------eceEEEEEccCCceEEEecCCC-----cEEEEEccCCeeeeeecCCCCceeEEE
Q psy7433 119 ---GDIK-------------------SPVKCLAIDPHEEFFVTGAGDG-----DIKVWSLSGNHLLYNFPGEHARSSFFK 171 (213)
Q Consensus 119 ---~~i~-------------------~~v~~~~~~~~~~~l~~~~~dg-----~i~v~d~~~~~~~~~~~~~~~~~~~~~ 171 (213)
..+. ..+.+++|+|||++|++++.++ .|.+||+.+++....+..+....
T Consensus 232 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~---- 307 (706)
T 2z3z_A 232 SHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKH---- 307 (706)
T ss_dssp CCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSS----
T ss_pred CCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCC----
Confidence 2222 3478899999999999887765 89999998883332222111000
Q ss_pred ecCCCeEEEEeCC--CCe-EEEEecCCcEEEEeCC
Q psy7433 172 HIGQGVTQLHVDG--GSR-LFSCGADGSMKVRQLP 203 (213)
Q Consensus 172 ~~~~~v~~~~~~~--~~~-l~s~~~d~~i~iw~~~ 203 (213)
....+..+.|+| ++. +++++.|+.+++|.+.
T Consensus 308 -~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~ 341 (706)
T 2z3z_A 308 -YVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYD 341 (706)
T ss_dssp -CCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEE
T ss_pred -eECccCCceeecCCCCEEEEEEccCCccEEEEEE
Confidence 001246789999 875 6777788999999876
No 149
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.80 E-value=1.4e-18 Score=141.33 Aligned_cols=183 Identities=11% Similarity=0.084 Sum_probs=131.8
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecC----------------CceEEEEecC
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQ----------------GASSLVFAPQ 66 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~----------------~v~~~~~~~~ 66 (213)
+..|...+.+++|+|||++|+.+ .++.|++||+. .++.......+.. .+..++|+||
T Consensus 147 l~~~~~~~~~~~~SPDG~~la~~----~~~~i~~~d~~---~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpD 219 (741)
T 2ecf_A 147 LTHGEGFATDAKLSPKGGFVSFI----RGRNLWVIDLA---SGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPD 219 (741)
T ss_dssp CCCSSSCEEEEEECTTSSEEEEE----ETTEEEEEETT---TTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTT
T ss_pred cccCCcccccccCCCCCCEEEEE----eCCcEEEEecC---CCCEEEeccCCccceeccccceeeeeccccccceEECCC
Confidence 45677889999999999999998 35699999984 3333222222222 1478999999
Q ss_pred CCEEEEEcCCC---------------------------------cEEEEeccC-ceEEEecc--cCCCCeeEEEecCCCC
Q psy7433 67 HQLLISAGKKG---------------------------------DICVIDLRQ-RVIRSRFN--AHESPVKCLAIDPHEE 110 (213)
Q Consensus 67 ~~~l~~~~~d~---------------------------------~v~iwd~~~-~~~~~~~~--~~~~~i~~~~~~~~~~ 110 (213)
|++|++++.|+ .|.+||+.+ ++...... .+...+..++| |+++
T Consensus 220 g~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~ 298 (741)
T 2ecf_A 220 DSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQ 298 (741)
T ss_dssp SSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETT
T ss_pred CCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCC
Confidence 99999887665 788999988 76554432 35667899999 9999
Q ss_pred EEEEecCC-----Ccee----------------e-----ceEEEEEccCCceEEEecCCCcEEEEEcc-CCeeeeeecCC
Q psy7433 111 FFVTGAGD-----GDIK----------------S-----PVKCLAIDPHEEFFVTGAGDGDIKVWSLS-GNHLLYNFPGE 163 (213)
Q Consensus 111 ~l~~~~~~-----~~i~----------------~-----~v~~~~~~~~~~~l~~~~~dg~i~v~d~~-~~~~~~~~~~~ 163 (213)
.|++++.+ ..+. . .+..++|+|+|+++++++.+|.+++|.+. .++ ...+..+
T Consensus 299 ~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~ 377 (741)
T 2ecf_A 299 HLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHG 377 (741)
T ss_dssp EEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCS
T ss_pred EEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeec
Confidence 98876542 1221 1 34589999999999999999988888775 344 5556554
Q ss_pred CCceeEEEecCCCeEEE-EeCCCC-eE-EEEecCC--cEEEEeCCC
Q psy7433 164 HARSSFFKHIGQGVTQL-HVDGGS-RL-FSCGADG--SMKVRQLPD 204 (213)
Q Consensus 164 ~~~~~~~~~~~~~v~~~-~~~~~~-~l-~s~~~d~--~i~iw~~~~ 204 (213)
. ..+..+ .|+|++ .| ++++.++ .++||++..
T Consensus 378 ~----------~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 378 N----------WSVDELLAVDEKAGLAYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp S----------SCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEET
T ss_pred c----------eEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEc
Confidence 3 567777 599976 45 4555555 899999864
No 150
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.80 E-value=1.2e-17 Score=140.41 Aligned_cols=181 Identities=7% Similarity=-0.027 Sum_probs=140.3
Q ss_pred ccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCC------
Q psy7433 4 QCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKG------ 77 (213)
Q Consensus 4 ~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------ 77 (213)
.+|...+..++|+|+|++|+++ +.++.|++||+ .+++.......|...+..++|+|+|++|++++.++
T Consensus 375 ~~~~~~~~~~~~SpDG~~la~~---~~~~~v~~~d~---~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~ 448 (1045)
T 1k32_A 375 EENLGNVFAMGVDRNGKFAVVA---NDRFEIMTVDL---ETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDG 448 (1045)
T ss_dssp CCCCCSEEEEEECTTSSEEEEE---ETTSEEEEEET---TTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCS
T ss_pred cCCccceeeeEECCCCCEEEEE---CCCCeEEEEEC---CCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccC
Confidence 3677889999999999999998 68899999999 45555555557888899999999999998877644
Q ss_pred ----cEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCce--------------------------------
Q psy7433 78 ----DICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI-------------------------------- 121 (213)
Q Consensus 78 ----~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i-------------------------------- 121 (213)
.|++||+.+++ ...+..+...+..++|+|+++.|+.++.++..
T Consensus 449 ~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (1045)
T 1k32_A 449 YVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTK 527 (1045)
T ss_dssp CCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGG
T ss_pred CCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCccc
Confidence 89999999887 56677778888999999999988877753210
Q ss_pred ----------------------e------eceEEEEEccCCceEEE-------------ecCCCcEEEEEccCCeeeeee
Q psy7433 122 ----------------------K------SPVKCLAIDPHEEFFVT-------------GAGDGDIKVWSLSGNHLLYNF 160 (213)
Q Consensus 122 ----------------------~------~~v~~~~~~~~~~~l~~-------------~~~dg~i~v~d~~~~~~~~~~ 160 (213)
. ..+..++++|+++++++ ......|.+||+.+++.....
T Consensus 528 ~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~~l~ 607 (1045)
T 1k32_A 528 LVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVK 607 (1045)
T ss_dssp CCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEEEE
T ss_pred cCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCcEEEee
Confidence 0 34678899999987775 122457888888876643222
Q ss_pred cCCCCceeEEEecCCCeEEEEeCCCCe-EEEEecCCcEEEEeCCCCc
Q psy7433 161 PGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 161 ~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d~~i~iw~~~~~~ 206 (213)
..+..++++|++. |++++.+ .+++||+.+++
T Consensus 608 --------------~~v~~~~~S~DG~~l~~~~~~-~i~~~d~~~~~ 639 (1045)
T 1k32_A 608 --------------NNLTDLRLSADRKTVMVRKDD-GKIYTFPLEKP 639 (1045)
T ss_dssp --------------EEEEEEEECTTSCEEEEEETT-SCEEEEESSCT
T ss_pred --------------cCcceEEECCCCCEEEEEcCC-cEEEEeCccCc
Confidence 2478899999765 6766655 89999998775
No 151
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.80 E-value=1.7e-18 Score=140.36 Aligned_cols=182 Identities=9% Similarity=-0.022 Sum_probs=125.5
Q ss_pred ceEEEEEeCCCCeEEEeecc------CCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEE
Q psy7433 9 ITSDFVFLGSCSLVATAGHS------SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVI 82 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~------s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iw 82 (213)
.|.+++|+|||++|+++... +.++.+.+||+..... ..+.....+...+..++|||+|+.|+.++. +.|++|
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~ 139 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYC 139 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEE
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEE
Confidence 49999999999999988310 0137899999843221 122222234445889999999999999876 799999
Q ss_pred eccCceEEEecccCCCCe------------------eEEEecCCCCEEEEecCCC-------------------------
Q psy7433 83 DLRQRVIRSRFNAHESPV------------------KCLAIDPHEEFFVTGAGDG------------------------- 119 (213)
Q Consensus 83 d~~~~~~~~~~~~~~~~i------------------~~~~~~~~~~~l~~~~~~~------------------------- 119 (213)
|+.+++.......+...+ .+++|+||++.|++++.++
T Consensus 140 ~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (723)
T 1xfd_A 140 AHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYP 219 (723)
T ss_dssp SSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECC
T ss_pred ECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCC
Confidence 999887665554433333 7899999999999887542
Q ss_pred ---------cee-----------------------eceEEEEEccCCceEEEecC----CCcEEEEEccCCeeeeeecCC
Q psy7433 120 ---------DIK-----------------------SPVKCLAIDPHEEFFVTGAG----DGDIKVWSLSGNHLLYNFPGE 163 (213)
Q Consensus 120 ---------~i~-----------------------~~v~~~~~~~~~~~l~~~~~----dg~i~v~d~~~~~~~~~~~~~ 163 (213)
.+. ..+..++|+|||+++++.+. +..|.+||+.+++....+..+
T Consensus 220 ~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~ 299 (723)
T 1xfd_A 220 KAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDE 299 (723)
T ss_dssp BTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEE
T ss_pred CCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEec
Confidence 221 23567999999998876643 357999999888765554332
Q ss_pred CCceeEEEecCCCe----EEEEeCCCCe-EEE--EecCC------cEEEEe
Q psy7433 164 HARSSFFKHIGQGV----TQLHVDGGSR-LFS--CGADG------SMKVRQ 201 (213)
Q Consensus 164 ~~~~~~~~~~~~~v----~~~~~~~~~~-l~s--~~~d~------~i~iw~ 201 (213)
.. ..+ ..++|+|++. |+. ...++ .|.+||
T Consensus 300 ~~---------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 300 SE---------AWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSS 341 (723)
T ss_dssp CS---------SCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEEC
T ss_pred cC---------CEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEe
Confidence 11 222 3679999764 553 45666 566777
No 152
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.80 E-value=5.7e-19 Score=143.16 Aligned_cols=176 Identities=10% Similarity=0.090 Sum_probs=124.8
Q ss_pred EEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecC---CceEEEEecCCCEEEEEcC---------CCc
Q psy7433 11 SDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQ---GASSLVFAPQHQLLISAGK---------KGD 78 (213)
Q Consensus 11 ~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~---------d~~ 78 (213)
.+++|+|++++++++ .|+.|++||+ ..++....+..+.. .+.+++|||||++|+.++. ++.
T Consensus 19 ~~~~~s~dg~~~~~~----~d~~i~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~ 91 (719)
T 1z68_A 19 FFPNWISGQEYLHQS----ADNNIVLYNI---ETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTAT 91 (719)
T ss_dssp CCCEESSSSEEEEEC----TTSCEEEEES---SSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred CccEECCCCeEEEEc----CCCCEEEEEc---CCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceE
Confidence 368999999766665 6899999998 34444444443333 4899999999999998876 689
Q ss_pred EEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------ece---------------
Q psy7433 79 ICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPV--------------- 125 (213)
Q Consensus 79 v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v--------------- 125 (213)
|++||+.+++.+.... ....+..++|+|||+.|+.+. ++.++ ..+
T Consensus 92 i~~~d~~~g~~~~~~~-l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~ 169 (719)
T 1z68_A 92 YYIYDLSNGEFVRGNE-LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLA 169 (719)
T ss_dssp EEEEETTTTEECCSSC-CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTC
T ss_pred EEEEECCCCcccccee-cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeeccc
Confidence 9999999987631111 235688999999999999876 44443 001
Q ss_pred --EEEEEccCCceEEEecCCC----------------------------------cEEEEEccCCeee--ee------ec
Q psy7433 126 --KCLAIDPHEEFFVTGAGDG----------------------------------DIKVWSLSGNHLL--YN------FP 161 (213)
Q Consensus 126 --~~~~~~~~~~~l~~~~~dg----------------------------------~i~v~d~~~~~~~--~~------~~ 161 (213)
.+++|+|||++|+.++.|. .|++||+.+++.. .. +.
T Consensus 170 ~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 249 (719)
T 1z68_A 170 TKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIA 249 (719)
T ss_dssp SSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHH
T ss_pred CcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCC
Confidence 4899999999999887552 7889998776542 11 12
Q ss_pred CCCCceeEEEecCCCeEEEEeCCCCeEEEE-ecC----CcEEEEe----CCCC
Q psy7433 162 GEHARSSFFKHIGQGVTQLHVDGGSRLFSC-GAD----GSMKVRQ----LPDR 205 (213)
Q Consensus 162 ~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~-~~d----~~i~iw~----~~~~ 205 (213)
.+. ..+..++|+|+++++.. ... ..|.+|| ..++
T Consensus 250 ~~~----------~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g 292 (719)
T 1z68_A 250 SSD----------YYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTW 292 (719)
T ss_dssp TSC----------EEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSE
T ss_pred CCc----------ceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCC
Confidence 222 57899999998875433 222 2488899 6554
No 153
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.79 E-value=5.6e-18 Score=142.51 Aligned_cols=178 Identities=15% Similarity=0.102 Sum_probs=142.6
Q ss_pred ccCceEEEEEe-CCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecC-CceEEEEecCCCEEEEEcCCCcEE-EE
Q psy7433 6 HNKITSDFVFL-GSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQ-GASSLVFAPQHQLLISAGKKGDIC-VI 82 (213)
Q Consensus 6 h~~~v~~~~~~-~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~v~-iw 82 (213)
|...+.+++|+ |+|+.|+++ + ++.|.+|++. ... ...+..|.. .+..++|+ +++.|+.++.+..+. +|
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~---~-~~~i~~~~~~---~~~-~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~ 364 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFV---S-RGQAFIQDVS---GTY-VLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIY 364 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEE---E-TTEEEEECTT---SSB-EEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEE
T ss_pred cccccceeeecCCCCCEEEEE---E-cCEEEEEcCC---CCc-eEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEE
Confidence 55679999999 999999998 3 7899999984 222 233455666 78999999 999999988888888 89
Q ss_pred eccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCC-
Q psy7433 83 DLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDG- 144 (213)
Q Consensus 83 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg- 144 (213)
|+.+++... +..+...+..++|+|+++.|++++.++.+. ..+..++|+|||++|++++.++
T Consensus 365 d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~ 443 (1045)
T 1k32_A 365 DYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKH 443 (1045)
T ss_dssp ETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECS
T ss_pred ECCCCCceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCcc
Confidence 998776544 346778899999999999999999988775 3467899999999998887654
Q ss_pred ---------cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCC
Q psy7433 145 ---------DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 145 ---------~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~ 204 (213)
.|++||+.+++ ...+..+. ..+..++|+|++ +|+.++.++...+|+...
T Consensus 444 ~~~~~~~~~~i~l~d~~~g~-~~~l~~~~----------~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~ 502 (1045)
T 1k32_A 444 GETDGYVMQAIHVYDMEGRK-IFAATTEN----------SHDYAPAFDADSKNLYYLSYRSLDPSPDRVV 502 (1045)
T ss_dssp STTCSCCEEEEEEEETTTTE-EEECSCSS----------SBEEEEEECTTSCEEEEEESCCCCCEECSSS
T ss_pred ccccCCCCCeEEEEECCCCc-EEEeeCCC----------cccCCceEcCCCCEEEEEecccCCcCcchhc
Confidence 89999998877 55555554 568889999976 488888888888887653
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.79 E-value=4.3e-16 Score=116.47 Aligned_cols=183 Identities=7% Similarity=0.065 Sum_probs=121.4
Q ss_pred ccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeee-----------cCCceEEEEecCCCEEEEEc
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCH-----------DQGASSLVFAPQHQLLISAG 74 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~l~~~~ 74 (213)
+...+..+++ ++++|+++. ..++.|.+|++........+.....+ ...+.+++|+|++++|++++
T Consensus 98 ~~~~p~~~~~--dg~~l~~~~--~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 173 (361)
T 3scy_A 98 MGADPCYLTT--NGKNIVTAN--YSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADD 173 (361)
T ss_dssp SSSCEEEEEE--CSSEEEEEE--TTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEE
T ss_pred CCCCcEEEEE--CCCEEEEEE--CCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEe
Confidence 3445666777 788777774 46889999998532222122111111 12347899999999666554
Q ss_pred -CCCcEEEEeccCce-------E------EEecccCCCCeeEEEecCCCCEEEEec-CCCcee-----------------
Q psy7433 75 -KKGDICVIDLRQRV-------I------RSRFNAHESPVKCLAIDPHEEFFVTGA-GDGDIK----------------- 122 (213)
Q Consensus 75 -~d~~v~iwd~~~~~-------~------~~~~~~~~~~i~~~~~~~~~~~l~~~~-~~~~i~----------------- 122 (213)
.++.|.+|++.... . ..........+..++|+|+++++++++ .++.+.
T Consensus 174 ~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~ 253 (361)
T 3scy_A 174 LGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAA 253 (361)
T ss_dssp TTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEES
T ss_pred CCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEec
Confidence 57899999887533 1 111222445678999999999887776 466554
Q ss_pred -----eceEEEEEccCCceEEEecC--CCcEEEEEcc--CCe--eeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEE
Q psy7433 123 -----SPVKCLAIDPHEEFFVTGAG--DGDIKVWSLS--GNH--LLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFS 190 (213)
Q Consensus 123 -----~~v~~~~~~~~~~~l~~~~~--dg~i~v~d~~--~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s 190 (213)
..+..++|+|+|++|+++.. ++.|.+|++. +++ .+..+.. +..+..++|+|++. |++
T Consensus 254 ~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-----------g~~~~~~~~spdg~~l~~ 322 (361)
T 3scy_A 254 DTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-----------GIHPRNFIITPNGKYLLV 322 (361)
T ss_dssp CSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-----------SSCCCEEEECTTSCEEEE
T ss_pred CCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-----------CCCCceEEECCCCCEEEE
Confidence 22458999999998876665 4899999995 333 3333333 14678899999764 666
Q ss_pred Ee-cCCcEEEEeCC
Q psy7433 191 CG-ADGSMKVRQLP 203 (213)
Q Consensus 191 ~~-~d~~i~iw~~~ 203 (213)
++ .++.|.+|++.
T Consensus 323 ~~~~~~~v~v~~~d 336 (361)
T 3scy_A 323 ACRDTNVIQIFERD 336 (361)
T ss_dssp EETTTTEEEEEEEC
T ss_pred EECCCCCEEEEEEE
Confidence 66 67899997665
No 155
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.78 E-value=6e-17 Score=120.12 Aligned_cols=142 Identities=15% Similarity=0.157 Sum_probs=107.1
Q ss_pred EEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeec-CCceEEEEecCCCEEE-EEcCCCcEEEEeccCceE
Q psy7433 12 DFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHD-QGASSLVFAPQHQLLI-SAGKKGDICVIDLRQRVI 89 (213)
Q Consensus 12 ~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~-~~~~d~~v~iwd~~~~~~ 89 (213)
.+++++++.+++++ +.++.|.+||. .+.+.+..+..+. ..+..++|+|++++++ +...++.|.+||+.+++.
T Consensus 4 g~~~~~~~~~~v~~---~~~~~v~~~d~---~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~ 77 (349)
T 1jmx_B 4 GPALKAGHEYMIVT---NYPNNLHVVDV---ASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKN 77 (349)
T ss_dssp CCCCCTTCEEEEEE---ETTTEEEEEET---TTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred cccccCCCEEEEEe---CCCCeEEEEEC---CCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcE
Confidence 34677888889988 68999999998 4555666655433 1578999999998654 556789999999999988
Q ss_pred EEecccCC------CCeeEEEecCCCCEEEEecCC------------Ccee-------------------eceEEEEEcc
Q psy7433 90 RSRFNAHE------SPVKCLAIDPHEEFFVTGAGD------------GDIK-------------------SPVKCLAIDP 132 (213)
Q Consensus 90 ~~~~~~~~------~~i~~~~~~~~~~~l~~~~~~------------~~i~-------------------~~v~~~~~~~ 132 (213)
...+.... ..+..++|+|+++++++++.+ +.+. ..+.+++|+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~ 157 (349)
T 1jmx_B 78 TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAAD 157 (349)
T ss_dssp EEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECT
T ss_pred EEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECC
Confidence 77665332 237899999999999988854 4443 3467888999
Q ss_pred CCceEEEecCCCcEEEEEccCCeeeeeecC
Q psy7433 133 HEEFFVTGAGDGDIKVWSLSGNHLLYNFPG 162 (213)
Q Consensus 133 ~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~ 162 (213)
+++ +++++. .|.+||+.+++....+..
T Consensus 158 dg~-l~~~~~--~i~~~d~~~~~~~~~~~~ 184 (349)
T 1jmx_B 158 DGS-LYVAGP--DIYKMDVKTGKYTVALPL 184 (349)
T ss_dssp TSC-EEEESS--SEEEECTTTCCEEEEECS
T ss_pred CCc-EEEccC--cEEEEeCCCCceeccccc
Confidence 999 555543 499999998887766654
No 156
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.77 E-value=1.4e-17 Score=132.13 Aligned_cols=181 Identities=9% Similarity=0.018 Sum_probs=126.9
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeec-CCceEEEEecCCCEEEEEcC---CCcEEEE
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHD-QGASSLVFAPQHQLLISAGK---KGDICVI 82 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~---d~~v~iw 82 (213)
..+|++++|+|||+.||+++ ..+++++||++ ..+. .+.+..+. ..+..++|+|+ +++++++. +....+|
T Consensus 21 ~~~~~~~~~~~DG~~la~~s--~~~g~~~lw~~---~~g~-~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~ 93 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVG--FSEGSVNAYLY---DGGE-TVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALF 93 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEE--EETTEEEEEEE---ETTE-EEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEE
T ss_pred ccchheeecCCCCCeEEEEE--ccCCceeEEEE---cCCC-cEeeecccccccccccCCCC-eEEEEeccCCCCcceEEE
Confidence 56799999999999999984 24999999997 3333 33444444 57899999999 77777664 4556666
Q ss_pred eccC---ceEEEecccCCCCeeEEEecCCCC--EEEEecCCCcee-------------eceEEEEEccCCceEEEecCC-
Q psy7433 83 DLRQ---RVIRSRFNAHESPVKCLAIDPHEE--FFVTGAGDGDIK-------------SPVKCLAIDPHEEFFVTGAGD- 143 (213)
Q Consensus 83 d~~~---~~~~~~~~~~~~~i~~~~~~~~~~--~l~~~~~~~~i~-------------~~v~~~~~~~~~~~l~~~~~d- 143 (213)
.+.. +... .+... ......+|+|+++ .++++..++... .+..+++|+|||++|+.++.+
T Consensus 94 ~~~~~~~g~~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~~~~~~spDG~~la~~~~~~ 171 (582)
T 3o4h_A 94 KVNTSRPGEEQ-RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFFG 171 (582)
T ss_dssp EEETTSTTCCE-ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEEETTEEEEEEEEE
T ss_pred EEeccCCCccc-cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCCceEEECCCCCEEEEEEEcC
Confidence 5543 2222 33322 2344668888775 344444444322 222688999999999988776
Q ss_pred ---CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEecCC--cEEEEeCCCCcc
Q psy7433 144 ---GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGADG--SMKVRQLPDRDA 207 (213)
Q Consensus 144 ---g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d~--~i~iw~~~~~~~ 207 (213)
+.|++||+.+++.. .+..+. ..+..++|+|++. |+++..++ .|++||+.+++.
T Consensus 172 ~~~~~i~~~d~~~g~~~-~l~~~~----------~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~ 230 (582)
T 3o4h_A 172 GGRVSLFTSNLSSGGLR-VFDSGE----------GSFSSASISPGMKVTAGLETAREARLVTVDPRDGSV 230 (582)
T ss_dssp TTEEEEEEEETTTCCCE-EECCSS----------CEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCE
T ss_pred CCCeEEEEEcCCCCCce-EeecCC----------CccccceECCCCCEEEEccCCCeeEEEEEcCCCCcE
Confidence 78999999877654 454443 5689999999875 77777788 899999987654
No 157
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.76 E-value=3.5e-16 Score=115.35 Aligned_cols=178 Identities=13% Similarity=0.135 Sum_probs=127.7
Q ss_pred CeEEEeeccCCCccEEEEeCCCcccccceeeeeeecC--CceEEEEecCCCEE-EEEcCCCcEEEEeccCceEEEecccC
Q psy7433 20 SLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQ--GASSLVFAPQHQLL-ISAGKKGDICVIDLRQRVIRSRFNAH 96 (213)
Q Consensus 20 ~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l-~~~~~d~~v~iwd~~~~~~~~~~~~~ 96 (213)
++++++ +.++.|.+||. .+.+.+..+..... .+..++|+|+++++ +++..++.|.+||+.+++.+..+...
T Consensus 2 ~~~v~~---~~~~~v~~~d~---~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~ 75 (337)
T 1pby_B 2 DYILAP---ARPDKLVVIDT---EKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLS 75 (337)
T ss_dssp EEEEEE---ETTTEEEEEET---TTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECC
T ss_pred cEEEEc---CCCCeEEEEEC---CCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcC
Confidence 467777 58999999998 45556665543221 47899999999765 55666889999999999877766532
Q ss_pred C-----CCeeEEEecCCCCEEEEec------------CCCcee----------------eceEEEEEccCCceEEEecCC
Q psy7433 97 E-----SPVKCLAIDPHEEFFVTGA------------GDGDIK----------------SPVKCLAIDPHEEFFVTGAGD 143 (213)
Q Consensus 97 ~-----~~i~~~~~~~~~~~l~~~~------------~~~~i~----------------~~v~~~~~~~~~~~l~~~~~d 143 (213)
. ..+..++|+|+++.++++. .++.+. ..+.+++|+|++++++++ +
T Consensus 76 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~ 153 (337)
T 1pby_B 76 TPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--G 153 (337)
T ss_dssp BTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--S
T ss_pred CcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--C
Confidence 1 2577899999999888885 355554 356789999999988887 6
Q ss_pred CcEEEEEccCCeeeeeecCCC--Cce------------------------------------------------------
Q psy7433 144 GDIKVWSLSGNHLLYNFPGEH--ARS------------------------------------------------------ 167 (213)
Q Consensus 144 g~i~v~d~~~~~~~~~~~~~~--~~~------------------------------------------------------ 167 (213)
+.|.+||+.+++....+..+. ...
T Consensus 154 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~ 233 (337)
T 1pby_B 154 RDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAM 233 (337)
T ss_dssp SSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEE
T ss_pred CeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceE
Confidence 889999999888776554332 000
Q ss_pred eEEEecCCCeEEEEeCCCCe-EEEEecCCcEEEEeCCCCcc
Q psy7433 168 SFFKHIGQGVTQLHVDGGSR-LFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 168 ~~~~~~~~~v~~~~~~~~~~-l~s~~~d~~i~iw~~~~~~~ 207 (213)
.....+...+.+++|+|++. ++++ ++.|++||+.+++.
T Consensus 234 ~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~ 272 (337)
T 1pby_B 234 REVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNAS 272 (337)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEE
T ss_pred eecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcC
Confidence 00112223566799999764 5555 79999999987643
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.75 E-value=8.5e-16 Score=114.86 Aligned_cols=189 Identities=13% Similarity=0.174 Sum_probs=123.0
Q ss_pred ccCceEEEEEeCCCCeEEEeeccC-CCccEEEEeCCCc-ccccceeeeeeecCCceEEEEecCCCEEEEEc-CCCcEEEE
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHSS-ESKNVCLWDSLLP-QKKALVQAFVCHDQGASSLVFAPQHQLLISAG-KKGDICVI 82 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~s-~~~~i~iwd~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~iw 82 (213)
+...+..++|+|++++|++++... .++.|.+|+++.. .....+.....+......+++ ++++|++++ .++.+.+|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEE
Confidence 456677899999999998884200 2379999998431 112333333334455667777 777777665 57899999
Q ss_pred eccCceEEEec------cc--------CCCCeeEEEecCCCCEEEEecC-CCcee-------------------------
Q psy7433 83 DLRQRVIRSRF------NA--------HESPVKCLAIDPHEEFFVTGAG-DGDIK------------------------- 122 (213)
Q Consensus 83 d~~~~~~~~~~------~~--------~~~~i~~~~~~~~~~~l~~~~~-~~~i~------------------------- 122 (213)
++.....+..+ .+ +...+.+++|+|+++++++++. ++.+.
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~ 205 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF 205 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce
Confidence 99754322111 11 1223578999999997665543 33322
Q ss_pred -----eceEEEEEccCCceEEEec-CCCcEEEEEccCCee--eeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEec
Q psy7433 123 -----SPVKCLAIDPHEEFFVTGA-GDGDIKVWSLSGNHL--LYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGA 193 (213)
Q Consensus 123 -----~~v~~~~~~~~~~~l~~~~-~dg~i~v~d~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~ 193 (213)
..+..++|+|+|+++++++ .++.|.+||+.+++. +..+..... +......++|+|++. |+++..
T Consensus 206 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~-------~~~~~~~i~~spdg~~l~v~~~ 278 (361)
T 3scy_A 206 KVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTV-------NAQGSGDIHLSPDGKYLYASNR 278 (361)
T ss_dssp ECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSS-------CCCCEEEEEECTTSSEEEEEEC
T ss_pred ecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCC-------CCCCcccEEECCCCCEEEEECC
Confidence 2356789999999777766 689999999987654 222322111 014568999999875 555554
Q ss_pred --CCcEEEEeCC
Q psy7433 194 --DGSMKVRQLP 203 (213)
Q Consensus 194 --d~~i~iw~~~ 203 (213)
++.|.+|++.
T Consensus 279 ~~~~~i~v~~~~ 290 (361)
T 3scy_A 279 LKADGVAIFKVD 290 (361)
T ss_dssp SSSCEEEEEEEC
T ss_pred CCCCEEEEEEEc
Confidence 5899999996
No 159
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.75 E-value=1.9e-15 Score=109.40 Aligned_cols=185 Identities=9% Similarity=0.176 Sum_probs=134.2
Q ss_pred ccCceEEEEEe-CCCCeEEEeeccCCCccEEEEeCCCcccccceeeeee-ecCCceEEEEecCCCEEEEEcCCCcEEEEe
Q psy7433 6 HNKITSDFVFL-GSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVC-HDQGASSLVFAPQHQLLISAGKKGDICVID 83 (213)
Q Consensus 6 h~~~v~~~~~~-~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd 83 (213)
|...+.++++. ++++++++.. ..++.|.+||. ..+.+..+.. +...+..++++|+++++++...++.|.+||
T Consensus 75 ~~~~p~~i~~~~~~g~l~v~~~--~~~~~i~~~d~----~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~ 148 (286)
T 1q7f_A 75 QLLYPNRVAVVRNSGDIIVTER--SPTHQIQIYNQ----YGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFD 148 (286)
T ss_dssp CBSSEEEEEEETTTTEEEEEEC--GGGCEEEEECT----TSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred cccCceEEEEEcCCCeEEEEcC--CCCCEEEEECC----CCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEc
Confidence 44678899994 6777777661 12789999994 3344444432 234678999999999888888889999999
Q ss_pred ccCceEEEecc--cCCCCeeEEEecCCCCEEEEecCCCcee------------------eceEEEEEccCCceEEEecCC
Q psy7433 84 LRQRVIRSRFN--AHESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPVKCLAIDPHEEFFVTGAGD 143 (213)
Q Consensus 84 ~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v~~~~~~~~~~~l~~~~~d 143 (213)
.. ++.+..+. .+...+..++++|+++.+++...++.+. ..+..++++|+|+++++...+
T Consensus 149 ~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~ 227 (286)
T 1q7f_A 149 QN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHN 227 (286)
T ss_dssp TT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSS
T ss_pred CC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCC
Confidence 64 55555543 3345688999999998777766666554 357889999999988888777
Q ss_pred C-cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCc
Q psy7433 144 G-DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 144 g-~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 206 (213)
+ .|.+||. +++.+..+..+.. ...+.+++++|++.|+.++.|+.|++|++....
T Consensus 228 ~~~i~~~~~-~g~~~~~~~~~~~--------~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 228 NFNLTIFTQ-DGQLISALESKVK--------HAQCFDVALMDDGSVVLASKDYRLYIYRYVQLA 282 (286)
T ss_dssp SCEEEEECT-TSCEEEEEEESSC--------CSCEEEEEEETTTEEEEEETTTEEEEEECSCCC
T ss_pred CEEEEEECC-CCCEEEEEcccCC--------CCcceeEEECCCCcEEEECCCCeEEEEEccccc
Confidence 6 9999995 4555555544321 134789999998876666789999999987643
No 160
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.73 E-value=2.3e-16 Score=118.33 Aligned_cols=184 Identities=10% Similarity=0.081 Sum_probs=123.3
Q ss_pred eEEEEEeCCCCe--EEEee------ccC----CCccEEEEeCCCcccccceeeeee----ecCCceEEEEecCCCEEEEE
Q psy7433 10 TSDFVFLGSCSL--VATAG------HSS----ESKNVCLWDSLLPQKKALVQAFVC----HDQGASSLVFAPQHQLLISA 73 (213)
Q Consensus 10 v~~~~~~~~~~~--l~~~g------~~s----~~~~i~iwd~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~ 73 (213)
+..++|+|+|++ ++++. ++. .++.+.+|+++. .++....+.. +...+.+++|+|+|++|+++
T Consensus 85 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~ 162 (365)
T 1jof_A 85 PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSE--TGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSA 162 (365)
T ss_dssp GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECT--TCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEE
T ss_pred CccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCC--CCcCcceEeeEEeCCCCcceEEEECCCCCEEEEE
Confidence 455789999994 44541 001 578999999842 2333323321 34578999999999988876
Q ss_pred c-CCCcEEEEecc-CceEE--Eecc--cCCCCeeEEEecCCCCEEEEecC-CCcee------------------------
Q psy7433 74 G-KKGDICVIDLR-QRVIR--SRFN--AHESPVKCLAIDPHEEFFVTGAG-DGDIK------------------------ 122 (213)
Q Consensus 74 ~-~d~~v~iwd~~-~~~~~--~~~~--~~~~~i~~~~~~~~~~~l~~~~~-~~~i~------------------------ 122 (213)
+ .++.|.+||+. +++.. ..+. .+...+..++|+|+++++++++. ++.+.
T Consensus 163 ~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~ 242 (365)
T 1jof_A 163 DLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPG 242 (365)
T ss_dssp ETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTT
T ss_pred cCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCC
Confidence 5 36799999998 66542 2333 23566899999999998877664 33221
Q ss_pred ----e-------ceEEEE-EccCCceEEEecCCC------cEEEEEcc-CCeeee---eecCCCCceeEEEecCCCeEEE
Q psy7433 123 ----S-------PVKCLA-IDPHEEFFVTGAGDG------DIKVWSLS-GNHLLY---NFPGEHARSSFFKHIGQGVTQL 180 (213)
Q Consensus 123 ----~-------~v~~~~-~~~~~~~l~~~~~dg------~i~v~d~~-~~~~~~---~~~~~~~~~~~~~~~~~~v~~~ 180 (213)
. .+..++ |+|+|++|++++.+. .|.+|++. +++... ....+. ..+..+
T Consensus 243 ~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~----------~~~~~~ 312 (365)
T 1jof_A 243 IPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPT----------SGGHSN 312 (365)
T ss_dssp CCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSS----------CCTTCC
T ss_pred cCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCC----------CCcccc
Confidence 0 366789 999999887765432 89999996 454432 122221 345667
Q ss_pred EeCC---C-CeEEEEec-CCcEEEEeCCCC
Q psy7433 181 HVDG---G-SRLFSCGA-DGSMKVRQLPDR 205 (213)
Q Consensus 181 ~~~~---~-~~l~s~~~-d~~i~iw~~~~~ 205 (213)
+|+| + ++|++++. ++.|++|++...
T Consensus 313 a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 313 AVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp CEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred eecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 8888 4 46777765 489999998765
No 161
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.73 E-value=3.5e-17 Score=129.79 Aligned_cols=181 Identities=7% Similarity=-0.044 Sum_probs=123.0
Q ss_pred ccc-CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCE-EEEEcCCCcEEEE
Q psy7433 5 CHN-KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQL-LISAGKKGDICVI 82 (213)
Q Consensus 5 ~h~-~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~v~iw 82 (213)
.|. ..+.+++|+|+ ++++++.....+....+|.++....+... .+. ........+|+|+++. +++.+.++.+.+|
T Consensus 61 ~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~-~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~ 137 (582)
T 3o4h_A 61 REPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLE-AVKPMRILSGVDTGEAVVFTGATEDRVALY 137 (582)
T ss_dssp SSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECT-TSCSBEEEEEEECSSCEEEEEECSSCEEEE
T ss_pred cccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc-ccc-CCCCceeeeeCCCCCeEEEEecCCCCceEE
Confidence 344 68999999999 77776621012455677665320012221 222 1223456788888853 3333344455699
Q ss_pred eccCceEEEecccCCCCeeEEEecCCCCEEEEecCC----Ccee----------------eceEEEEEccCCceEEEecC
Q psy7433 83 DLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD----GDIK----------------SPVKCLAIDPHEEFFVTGAG 142 (213)
Q Consensus 83 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~----~~i~----------------~~v~~~~~~~~~~~l~~~~~ 142 (213)
|+.+++.......+ . .+++|+|||+.++.++.+ ..+. ..+..++|+|||++|+++..
T Consensus 138 d~~~g~~~~l~~~~-~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~ 214 (582)
T 3o4h_A 138 ALDGGGLRELARLP-G--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLET 214 (582)
T ss_dssp EEETTEEEEEEEES-S--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEEC
T ss_pred EccCCcEEEeecCC-C--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccC
Confidence 99988765544432 2 889999999999977765 3343 56789999999999998888
Q ss_pred CC--cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEE--------eCCCCe-EEEEecCCcEEEEeC
Q psy7433 143 DG--DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLH--------VDGGSR-LFSCGADGSMKVRQL 202 (213)
Q Consensus 143 dg--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--------~~~~~~-l~s~~~d~~i~iw~~ 202 (213)
++ .|++||+.+++.. .+..+. ..+..+. |+|++. +++++.|+.+++|++
T Consensus 215 ~~~~~i~~~d~~~~~~~-~~~~~~----------~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 215 AREARLVTVDPRDGSVE-DLELPS----------KDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp SSCEEEEEECTTTCCEE-ECCCSC----------SHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred CCeeEEEEEcCCCCcEE-EccCCC----------cChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 88 8999999888776 555543 2344444 999765 678889999999999
No 162
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.73 E-value=1.9e-16 Score=128.95 Aligned_cols=185 Identities=8% Similarity=0.040 Sum_probs=125.2
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCC-----ceEEEEecCCCEEEEEcCC------
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQG-----ASSLVFAPQHQLLISAGKK------ 76 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~~~d------ 76 (213)
....++.|+|++++++++ |+.|++||+. +++....+..|... ...+.|||||++|+.++.+
T Consensus 17 ~~~~~~~w~~dg~~~~~~-----~~~i~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~ 88 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ-----ENNILVFNAE---YGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRH 88 (740)
T ss_dssp CCCCCEEECSSSEEEEEE-----TTEEEEEETT---TCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSS
T ss_pred ccccccEECCCCcEEEEc-----CCcEEEEECC---CCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEE
Confidence 346689999999888875 7899999984 44444445554432 2448899999999988765
Q ss_pred ---CcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------ece----------
Q psy7433 77 ---GDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPV---------- 125 (213)
Q Consensus 77 ---~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v---------- 125 (213)
+.+.+||+.+++.. .+..+...+...+|+|||+.|+.+.. +.+. ..+
T Consensus 89 ~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ 166 (740)
T 4a5s_A 89 SYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVWN-NDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYE 166 (740)
T ss_dssp CEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEET-TEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHH
T ss_pred ccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEEC-CeEEEEECCCCceEEEcCCCCccceecCccccccc
Confidence 56779999998754 45667788999999999999988753 3333 011
Q ss_pred -------EEEEEccCCceEEEecCCC------------------------------------cEEEEEccC---Ce--ee
Q psy7433 126 -------KCLAIDPHEEFFVTGAGDG------------------------------------DIKVWSLSG---NH--LL 157 (213)
Q Consensus 126 -------~~~~~~~~~~~l~~~~~dg------------------------------------~i~v~d~~~---~~--~~ 157 (213)
..+.|||||++|+.++.|. .|++||+.+ ++ ..
T Consensus 167 ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~ 246 (740)
T 4a5s_A 167 EEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATS 246 (740)
T ss_dssp HHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCE
T ss_pred chhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceE
Confidence 2488999999988875332 356666665 42 11
Q ss_pred eeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEec----CCcEEEEeCCCCc
Q psy7433 158 YNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGA----DGSMKVRQLPDRD 206 (213)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~----d~~i~iw~~~~~~ 206 (213)
..+..... ...+...+..++|+|++. ++.... +..|++||+.+++
T Consensus 247 ~~l~~~~~----~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 247 IQITAPAS----MLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp EEECCCHH----HHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred EEecCCcc----CCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 12221000 000225689999999886 443322 3379999998875
No 163
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.71 E-value=2.8e-14 Score=105.51 Aligned_cols=186 Identities=13% Similarity=0.119 Sum_probs=135.7
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCC------------------------ccEEEEeCCCcccccceeeee-eecCCceEE
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSES------------------------KNVCLWDSLLPQKKALVQAFV-CHDQGASSL 61 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~------------------------~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~ 61 (213)
-+.+.+++++|+|+++++. ..+ +.|.+||. .+++.+..+. .+......+
T Consensus 23 l~~v~~va~d~~G~l~v~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~---~~g~~~~~~~~~~~~~p~gi 96 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFH---RGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDP---NNAEILQSSGKNLFYLPHGL 96 (329)
T ss_dssp CSCEEEEEECTTCCEEEEE---CTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECT---TTCCEEEEECTTTCSSEEEE
T ss_pred cCCceEEEECCCCCEEEEe---CCCCeEEeeccCcceeecccccccccCCcEEEEEC---CCCeEEeccCCCccCCceEE
Confidence 4679999999999999887 445 47999997 3444444432 233467899
Q ss_pred EEecCCCEEEEEcCCCcEEEEeccCce-EEEec---------ccCCCCeeEEEecC-CCCEEEEec-CCCcee-------
Q psy7433 62 VFAPQHQLLISAGKKGDICVIDLRQRV-IRSRF---------NAHESPVKCLAIDP-HEEFFVTGA-GDGDIK------- 122 (213)
Q Consensus 62 ~~~~~~~~l~~~~~d~~v~iwd~~~~~-~~~~~---------~~~~~~i~~~~~~~-~~~~l~~~~-~~~~i~------- 122 (213)
+++|+++++++...++.|++||..... .+..+ ..+......++++| ++..+++.+ .++.+.
T Consensus 97 a~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~ 176 (329)
T 3fvz_A 97 SIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGK 176 (329)
T ss_dssp EECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSC
T ss_pred EECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCC
Confidence 999999988888889999999986542 34444 22334688999999 788777775 566664
Q ss_pred ---------e----------ceEEEEEccC-CceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEe
Q psy7433 123 ---------S----------PVKCLAIDPH-EEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHV 182 (213)
Q Consensus 123 ---------~----------~v~~~~~~~~-~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 182 (213)
. .+..++++|+ +.++++...++.|++||..+++.+..+..... +..+..+++
T Consensus 177 ~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~--------~~~~~~~~~ 248 (329)
T 3fvz_A 177 FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASF--------GRNVFAISY 248 (329)
T ss_dssp EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTT--------TTCEEEEEE
T ss_pred EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEecccc--------CCCcceeee
Confidence 1 1789999998 77888888899999999988888887754321 256778888
Q ss_pred CCCCe-EEEE-------ecCCcEEEEeCCCCcc
Q psy7433 183 DGGSR-LFSC-------GADGSMKVRQLPDRDA 207 (213)
Q Consensus 183 ~~~~~-l~s~-------~~d~~i~iw~~~~~~~ 207 (213)
+| +. +.+. ..+..|++|+..+++.
T Consensus 249 ~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~ 280 (329)
T 3fvz_A 249 IP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEI 280 (329)
T ss_dssp ET-TEEEEEECCCCTTCSCCCCEEEEETTTCCE
T ss_pred cC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeE
Confidence 88 33 2222 2345899999887753
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.71 E-value=3.4e-15 Score=111.96 Aligned_cols=187 Identities=10% Similarity=0.088 Sum_probs=121.1
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeee-cCCceEEEEecCCCE--EEEEc----------
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCH-DQGASSLVFAPQHQL--LISAG---------- 74 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~--l~~~~---------- 74 (213)
..+..++|+|++++|+++ +.+ .|.+|++. ..++........ .+....++|+|++++ +++++
T Consensus 40 ~~~~~~a~spdg~~l~~~---~~~-~v~~~~~~--~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~ 113 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGA---AMK-KWSSFAVK--SPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANP 113 (365)
T ss_dssp CCCSEEEECTTSSEEEEE---EBT-EEEEEEEE--ETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEE
T ss_pred CCCcEEEECCCCCEEEEE---ccc-eEEEEEEC--CCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccce
Confidence 467889999999999888 345 89999983 133333222211 134667899999984 45553
Q ss_pred ---CCCcEEEEecc-CceEEEecc----cCCCCeeEEEecCCCCEEEEecC-CCcee----------------------e
Q psy7433 75 ---KKGDICVIDLR-QRVIRSRFN----AHESPVKCLAIDPHEEFFVTGAG-DGDIK----------------------S 123 (213)
Q Consensus 75 ---~d~~v~iwd~~-~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~-~~~i~----------------------~ 123 (213)
.++.+.+|++. +++....+. .+...+.+++|+|++++++++.. ++.+. .
T Consensus 114 ~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~ 193 (365)
T 1jof_A 114 FYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGD 193 (365)
T ss_dssp ESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTC
T ss_pred eecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCC
Confidence 68899999997 455443332 24567899999999998877643 22222 1
Q ss_pred ceEEEEEccCCceEEEecC-CCcEEEEEcc--CCeee---eeecCCCCceeEEEecCC------CeEEEE-eCCCCe-EE
Q psy7433 124 PVKCLAIDPHEEFFVTGAG-DGDIKVWSLS--GNHLL---YNFPGEHARSSFFKHIGQ------GVTQLH-VDGGSR-LF 189 (213)
Q Consensus 124 ~v~~~~~~~~~~~l~~~~~-dg~i~v~d~~--~~~~~---~~~~~~~~~~~~~~~~~~------~v~~~~-~~~~~~-l~ 189 (213)
.+..++|+|+|+++++++. ++.|.+|++. +++.. ..+...... +..+.. .+..++ |+|++. |+
T Consensus 194 ~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~i~~~spdG~~l~ 270 (365)
T 1jof_A 194 HPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPG---IPDRDPETGKGLYRADVCALTFSGKYMF 270 (365)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTT---CCCBCTTTSSBSEEEEEEEECTTSSEEE
T ss_pred CCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCC---cCCcccccccccccccEEEECCCCCEEE
Confidence 2677899999998877765 6899999875 44432 112111000 000001 478899 999874 55
Q ss_pred EEec-CC-----cEEEEeCC
Q psy7433 190 SCGA-DG-----SMKVRQLP 203 (213)
Q Consensus 190 s~~~-d~-----~i~iw~~~ 203 (213)
++.. ++ .|.+|++.
T Consensus 271 v~~~~~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 271 ASSRANKFELQGYIAGFKLR 290 (365)
T ss_dssp EEEEESSTTSCCEEEEEEEC
T ss_pred EECCCCCCCCCCeEEEEEEC
Confidence 5543 23 89999996
No 165
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.70 E-value=1.7e-15 Score=114.05 Aligned_cols=180 Identities=11% Similarity=0.021 Sum_probs=119.5
Q ss_pred EEEeCCCCeEEEeeccCCCc--cEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEE
Q psy7433 13 FVFLGSCSLVATAGHSSESK--NVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIR 90 (213)
Q Consensus 13 ~~~~~~~~~l~~~g~~s~~~--~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~ 90 (213)
.+|+|||+.|+.+. ..++ .|.+||+ ..++.......+...+..+.|+|+++.|+.++.++.|++||+.+++..
T Consensus 41 ~~~SpDg~~l~~~~--~~~g~~~l~~~d~---~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~ 115 (388)
T 3pe7_A 41 KCFTRDGSKLLFGG--AFDGPWNYYLLDL---NTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEEN 115 (388)
T ss_dssp CCBCTTSCEEEEEE--CTTSSCEEEEEET---TTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEE
T ss_pred ccCCCCCCEEEEEE--cCCCCceEEEEeC---CCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcce
Confidence 78999999999884 2356 4888887 344444444445445556789999999999998999999999998766
Q ss_pred EecccCCCCeeEE--EecCCCCEEEEec----------------------CCCcee----------------eceEEEEE
Q psy7433 91 SRFNAHESPVKCL--AIDPHEEFFVTGA----------------------GDGDIK----------------SPVKCLAI 130 (213)
Q Consensus 91 ~~~~~~~~~i~~~--~~~~~~~~l~~~~----------------------~~~~i~----------------~~v~~~~~ 130 (213)
..+..+...+... .++|+++.++... .+..+. ..+..+.|
T Consensus 116 ~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~ 195 (388)
T 3pe7_A 116 VVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIY 195 (388)
T ss_dssp EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEE
T ss_pred eeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEE
Confidence 6555444444333 3478888776321 112221 45788999
Q ss_pred cc-CCceEEEecCC------CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEec-CC----cE
Q psy7433 131 DP-HEEFFVTGAGD------GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGA-DG----SM 197 (213)
Q Consensus 131 ~~-~~~~l~~~~~d------g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~-d~----~i 197 (213)
+| +|+.|+....+ ..|.++|+..++.. .+..+.. +..+....|+|++. |+..+. ++ .|
T Consensus 196 sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~--------~~~~~~~~~spdg~~l~~~~~~~~~~~~~l 266 (388)
T 3pe7_A 196 RPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR-KVKTHAE--------GESCTHEFWVPDGSALVYVSYLKGSPDRFI 266 (388)
T ss_dssp ETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCE-ESCCCCT--------TEEEEEEEECTTSSCEEEEEEETTCCCEEE
T ss_pred CCCCCCEEEEEEecCCCCCcceEEEEeCCCCceE-EeeeCCC--------CcccccceECCCCCEEEEEecCCCCCcceE
Confidence 99 99988776653 36777787654432 3322221 02477889999764 544433 22 39
Q ss_pred EEEeCCCCc
Q psy7433 198 KVRQLPDRD 206 (213)
Q Consensus 198 ~iw~~~~~~ 206 (213)
++||+.+++
T Consensus 267 ~~~d~~~g~ 275 (388)
T 3pe7_A 267 YSADPETLE 275 (388)
T ss_dssp EEECTTTCC
T ss_pred EEEecCCCc
Confidence 999998775
No 166
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.70 E-value=1.9e-15 Score=121.41 Aligned_cols=185 Identities=10% Similarity=0.032 Sum_probs=127.0
Q ss_pred ccCceEEEEEeCCCCeEEEeeccCCC----------ccEEEEeCCCcc--c-ccceeeee-eecCCceEEEEecCCCEEE
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHSSES----------KNVCLWDSLLPQ--K-KALVQAFV-CHDQGASSLVFAPQHQLLI 71 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~s~~----------~~i~iwd~~~~~--~-~~~~~~~~-~~~~~v~~~~~~~~~~~l~ 71 (213)
|...+.+++|+|||+.|+++ +.+ ..|++||+.... . . ....+. .+...+..++|+|||++|+
T Consensus 128 ~~~~~~~~~~spDg~~l~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~SpDG~~la 203 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCM---AEEFTGEGPSDVRRFLAAVPLDGSAAADRS-AVRELSDDAHRFVTGPRLSPDGRQAV 203 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEE---EEEECSSSTTCEEEEEEEEETTSTTTTCGG-GSEESSCSCSSEECCCEECTTSSEEE
T ss_pred CCccccCcEECCCCCEEEEE---EecccCCCCCCceeEEEEEECCCCccccCC-ceeEEEecCCCcccCceECCCCCEEE
Confidence 56788999999999999988 444 589999984210 0 2 233444 4456678899999999998
Q ss_pred EEcCC--------CcEEEEecc-Cc---eEEEecccCCCCeeEEEecCCCCEEEEecCCCc--ee---------------
Q psy7433 72 SAGKK--------GDICVIDLR-QR---VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGD--IK--------------- 122 (213)
Q Consensus 72 ~~~~d--------~~v~iwd~~-~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~--i~--------------- 122 (213)
.++.+ ..|.+||+. ++ +.......+...+..++|+|++++++++..++. +.
T Consensus 204 ~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~ 283 (662)
T 3azo_A 204 WLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRR 283 (662)
T ss_dssp EEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCC
T ss_pred EEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccc
Confidence 77754 479999998 56 444444445678999999999997777777763 32
Q ss_pred --e--------ceEEEEEccCCceEEEecCCCcEEEE--EccCCeeeeeecCCCCceeEEEecCCCeEEE-EeCCCCeE-
Q psy7433 123 --S--------PVKCLAIDPHEEFFVTGAGDGDIKVW--SLSGNHLLYNFPGEHARSSFFKHIGQGVTQL-HVDGGSRL- 188 (213)
Q Consensus 123 --~--------~v~~~~~~~~~~~l~~~~~dg~i~v~--d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~l- 188 (213)
. .+..++|+|+++++++++. +.+++| |+..++ +..+..+. ..+..+ +++++..+
T Consensus 284 ~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~----------~~~~~~~s~~~~~~~~ 351 (662)
T 3azo_A 284 EEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPW----------TEWAATLTVSGTRAVG 351 (662)
T ss_dssp SSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSC----------CEEEEEEEEETTEEEE
T ss_pred cccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCC----------CeEEEEEecCCCEEEE
Confidence 0 1467888999999999998 999999 544444 55555543 456666 55544443
Q ss_pred EEEecCC--cEEEEeCCCCc
Q psy7433 189 FSCGADG--SMKVRQLPDRD 206 (213)
Q Consensus 189 ~s~~~d~--~i~iw~~~~~~ 206 (213)
++.+.+. .|.++|+.+++
T Consensus 352 ~~~~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 352 VAASPRTAYEVVELDTVTGR 371 (662)
T ss_dssp EEEETTEEEEEEEEETTTCC
T ss_pred EEcCCCCCCEEEEEECCCCc
Confidence 4444454 45555665543
No 167
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.70 E-value=1.4e-14 Score=105.43 Aligned_cols=180 Identities=13% Similarity=0.141 Sum_probs=130.4
Q ss_pred cccCceEEEEEeCCCC-eEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEe
Q psy7433 5 CHNKITSDFVFLGSCS-LVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVID 83 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~-~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd 83 (213)
.+.....+++|+|+++ ++++. ..++.|..|+.. .. ...+..+...+.+++++++++++++...++.|.+||
T Consensus 25 ~~~~~~eg~~~d~~g~~l~~~~---~~~~~i~~~~~~---~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d 96 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARSAVIFSD---VRQNRTWAWSDD---GQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQR 96 (296)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEE---GGGTEEEEEETT---SC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEEC
T ss_pred cCCccccCCeEeCCCCEEEEEe---CCCCEEEEEECC---CC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEc
Confidence 4556678999999998 66666 578999999973 33 455555667789999999999888877778999999
Q ss_pred ccCceEEEeccc----CCCCeeEEEecCCCCEEEE----ecC-------------CCcee---------------eceEE
Q psy7433 84 LRQRVIRSRFNA----HESPVKCLAIDPHEEFFVT----GAG-------------DGDIK---------------SPVKC 127 (213)
Q Consensus 84 ~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~----~~~-------------~~~i~---------------~~v~~ 127 (213)
..+++....... ....+..++++|+++.+++ +.. .+.+. ..+..
T Consensus 97 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~g 176 (296)
T 3e5z_A 97 EPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTLSAPIRDRVKPNG 176 (296)
T ss_dssp STTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCEEEEECCCSSEEE
T ss_pred CCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCCCEEEeecCCCCCcc
Confidence 988765433221 1234678999999998886 321 12222 45688
Q ss_pred EEEccCCceEEEecCCCcEEEEEcc-CCee---eeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCC
Q psy7433 128 LAIDPHEEFFVTGAGDGDIKVWSLS-GNHL---LYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLP 203 (213)
Q Consensus 128 ~~~~~~~~~l~~~~~dg~i~v~d~~-~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~ 203 (213)
++|+|+++.+++.+.++.|.+||+. ++.. ...+..+ ...+.++++++++.|..+. ++.|.+|+..
T Consensus 177 i~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~----------~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~ 245 (296)
T 3e5z_A 177 LAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVE----------PGKTDGLRVDAGGLIWASA-GDGVHVLTPD 245 (296)
T ss_dssp EEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCS----------SSCCCSEEEBTTSCEEEEE-TTEEEEECTT
T ss_pred EEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCC----------CCCCCeEEECCCCCEEEEc-CCeEEEECCC
Confidence 9999999988777888999999996 4433 2223111 1456778999887766666 8889999976
No 168
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.69 E-value=5.7e-14 Score=101.63 Aligned_cols=182 Identities=8% Similarity=0.131 Sum_probs=131.8
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeee------ecCCceEEEEe-cCCCEEEEEcC-C
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVC------HDQGASSLVFA-PQHQLLISAGK-K 76 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~------~~~~v~~~~~~-~~~~~l~~~~~-d 76 (213)
++-..+.+++++|+++++++. ..++.|.+||.+ ...+..+.. +...+..++++ ++++++++... +
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~---~~~~~i~~~d~~----g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~ 99 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVAD---TNNHRIQIFDKE----GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPT 99 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEE---GGGTEEEEECTT----SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGG
T ss_pred CccCCCceEEECCCCCEEEEE---CCCCEEEEECCC----CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCC
Confidence 456779999999999988887 578999999973 334444432 33567899995 67766666543 7
Q ss_pred CcEEEEeccCceEEEeccc-CCCCeeEEEecCCCCEEEEecCCCcee------------------eceEEEEEccCCceE
Q psy7433 77 GDICVIDLRQRVIRSRFNA-HESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPVKCLAIDPHEEFF 137 (213)
Q Consensus 77 ~~v~iwd~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v~~~~~~~~~~~l 137 (213)
+.|.+|| .+++.+..+.. ....+..++++|+++.+++...++.+. ..+..++++|+++++
T Consensus 100 ~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~ 178 (286)
T 1q7f_A 100 HQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIF 178 (286)
T ss_dssp CEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEE
T ss_pred CEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEE
Confidence 8999999 56666665543 345688999999998777766666554 347889999999988
Q ss_pred EEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeE-EEEecCC-cEEEEeCC
Q psy7433 138 VTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRL-FSCGADG-SMKVRQLP 203 (213)
Q Consensus 138 ~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l-~s~~~d~-~i~iw~~~ 203 (213)
++...++.|++||.. ++.+..+..+.. ...+..+++++++.+ ++...++ .|.+|+..
T Consensus 179 v~~~~~~~i~~~~~~-g~~~~~~~~~g~--------~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 179 ISDNRAHCVKVFNYE-GQYLRQIGGEGI--------TNYPIGVGINSNGEILIADNHNNFNLTIFTQD 237 (286)
T ss_dssp EEEGGGTEEEEEETT-CCEEEEESCTTT--------SCSEEEEEECTTCCEEEEECSSSCEEEEECTT
T ss_pred EEECCCCEEEEEcCC-CCEEEEEccCCc--------cCCCcEEEECCCCCEEEEeCCCCEEEEEECCC
Confidence 888889999999974 455555543211 146889999987664 4555565 99999964
No 169
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.69 E-value=5.2e-16 Score=125.86 Aligned_cols=178 Identities=10% Similarity=0.023 Sum_probs=122.1
Q ss_pred ceEEEEEeCCCCeEEEeeccCC---------CccEEEEeCCCcccccce--eeeeeecCCceEEEEecCCCEEEEEcCCC
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSE---------SKNVCLWDSLLPQKKALV--QAFVCHDQGASSLVFAPQHQLLISAGKKG 77 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~---------~~~i~iwd~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 77 (213)
.+.+++|+|||++|+++ +. ++.|++||+. .++.+ ..+ ...+..++|||+|+.|+.+. ++
T Consensus 61 ~~~~~~~SpDg~~la~~---~~~~~~~~~s~~~~i~~~d~~---~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~ 130 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLE---SDYSKLWRYSYTATYYIYDLS---NGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QN 130 (719)
T ss_dssp TCSEEEECTTSSEEEEE---EEEEECSSSCEEEEEEEEETT---TTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TT
T ss_pred ceeeEEECCCCCeEEEE---ecCceeEEeecceEEEEEECC---CCccccceec---CcccccceECCCCCEEEEEE-CC
Confidence 38899999999999988 33 6899999984 33321 122 24688999999999999885 68
Q ss_pred cEEEEeccCceEEEecc-cCCCC-----------------eeEEEecCCCCEEEEecCCC--------------------
Q psy7433 78 DICVIDLRQRVIRSRFN-AHESP-----------------VKCLAIDPHEEFFVTGAGDG-------------------- 119 (213)
Q Consensus 78 ~v~iwd~~~~~~~~~~~-~~~~~-----------------i~~~~~~~~~~~l~~~~~~~-------------------- 119 (213)
.|++||+.+++..+... ++... ..+++|+|||+.|++++.+.
T Consensus 131 ~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~ 210 (719)
T 1z68_A 131 NIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTI 210 (719)
T ss_dssp EEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEE
T ss_pred eEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccce
Confidence 99999998887654332 22221 25899999999999887542
Q ss_pred --------------cee-------------------------eceEEEEEccCCceEEEecCC----CcEEEEE----cc
Q psy7433 120 --------------DIK-------------------------SPVKCLAIDPHEEFFVTGAGD----GDIKVWS----LS 152 (213)
Q Consensus 120 --------------~i~-------------------------~~v~~~~~~~~~~~l~~~~~d----g~i~v~d----~~ 152 (213)
.+. ..+..++|+||++++++.... ..|.+|| +.
T Consensus 211 ~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~ 290 (719)
T 1z68_A 211 NIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQ 290 (719)
T ss_dssp EEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSS
T ss_pred eecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCC
Confidence 111 135889999998877764332 2488899 77
Q ss_pred CCeeeeee----cCCCCceeEEEecCCCeE-----EEEeCCCCe-EE--EEecCC--cEEEEeCCCCc
Q psy7433 153 GNHLLYNF----PGEHARSSFFKHIGQGVT-----QLHVDGGSR-LF--SCGADG--SMKVRQLPDRD 206 (213)
Q Consensus 153 ~~~~~~~~----~~~~~~~~~~~~~~~~v~-----~~~~~~~~~-l~--s~~~d~--~i~iw~~~~~~ 206 (213)
+++....+ ..+. ..+. .+.|+|++. ++ +...+| .|.+|++.+++
T Consensus 291 ~g~~~~~~~~~~~~~~----------~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~ 348 (719)
T 1z68_A 291 TWDCPKTQEHIEESRT----------GWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN 348 (719)
T ss_dssp SEECCGGGEEEEECSS----------SCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT
T ss_pred CCceEEEEecccccCC----------ceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc
Confidence 77665544 2332 3344 678999764 33 344555 56667776543
No 170
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.68 E-value=1.8e-14 Score=106.51 Aligned_cols=187 Identities=12% Similarity=0.115 Sum_probs=132.7
Q ss_pred ccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeee---------eeecCCceEEEEec-CCCEEEEEc-
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAF---------VCHDQGASSLVFAP-QHQLLISAG- 74 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~---------~~~~~~v~~~~~~~-~~~~l~~~~- 74 (213)
+-..+..++++|+|+++++. ..++.|++||.+. ....+..+ ..+......++++| +++++++.+
T Consensus 89 ~~~~p~gia~d~~g~l~v~d---~~~~~v~~~~~~g--~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~ 163 (329)
T 3fvz_A 89 LFYLPHGLSIDTDGNYWVTD---VALHQVFKLDPHS--KEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGY 163 (329)
T ss_dssp TCSSEEEEEECTTSCEEEEE---TTTTEEEEECTTC--SSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECS
T ss_pred ccCCceEEEECCCCCEEEEE---CCCCEEEEEeCCC--CeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCC
Confidence 33568899999999988887 6789999999731 11133333 22334678999999 788888876
Q ss_pred CCCcEEEEeccCceEEEecccCC----------CCeeEEEecCC-CCEEEEecCCCcee-------------------ec
Q psy7433 75 KKGDICVIDLRQRVIRSRFNAHE----------SPVKCLAIDPH-EEFFVTGAGDGDIK-------------------SP 124 (213)
Q Consensus 75 ~d~~v~iwd~~~~~~~~~~~~~~----------~~i~~~~~~~~-~~~l~~~~~~~~i~-------------------~~ 124 (213)
.++.|++|| .+++.+..+.... .....++++|+ +..+++...++.+. ..
T Consensus 164 ~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~ 242 (329)
T 3fvz_A 164 CNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRN 242 (329)
T ss_dssp SCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTC
T ss_pred CCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCC
Confidence 689999999 5566666553221 23789999998 66666666666554 24
Q ss_pred eEEEEEcc------CCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEecCCcE
Q psy7433 125 VKCLAIDP------HEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGADGSM 197 (213)
Q Consensus 125 v~~~~~~~------~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d~~i 197 (213)
+..++|+| +++.+++...+..|++||+.+++.+..+..... +...+..++++|++. +++...++.|
T Consensus 243 ~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~-------~~~~p~~ia~~~dG~lyvad~~~~~I 315 (329)
T 3fvz_A 243 VFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRK-------HFDMPHDIVASEDGTVYIGDAHTNTV 315 (329)
T ss_dssp EEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSS-------CCSSEEEEEECTTSEEEEEESSSCCE
T ss_pred cceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCC-------ccCCeeEEEECCCCCEEEEECCCCEE
Confidence 67788888 444344444556899999999998888742111 015689999999875 5666778999
Q ss_pred EEEeCCCC
Q psy7433 198 KVRQLPDR 205 (213)
Q Consensus 198 ~iw~~~~~ 205 (213)
++|++...
T Consensus 316 ~~~~~~~~ 323 (329)
T 3fvz_A 316 WKFTLTEK 323 (329)
T ss_dssp EEEEEEEC
T ss_pred EEEeCCcc
Confidence 99998653
No 171
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.68 E-value=1.1e-14 Score=109.15 Aligned_cols=178 Identities=11% Similarity=0.150 Sum_probs=120.5
Q ss_pred EEEEeCCCCeEEEeec-------cCCCccEEEEeCCCcccccceeeeeee------cCCceEEEEecCCCEEEEEcC--C
Q psy7433 12 DFVFLGSCSLVATAGH-------SSESKNVCLWDSLLPQKKALVQAFVCH------DQGASSLVFAPQHQLLISAGK--K 76 (213)
Q Consensus 12 ~~~~~~~~~~l~~~g~-------~s~~~~i~iwd~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~--d 76 (213)
.++|+|++++++++.+ +..++.|.+||. .+.+.+..+... ......++++|+|++|++++. +
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~---~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~ 130 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDA---DKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPA 130 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEET---TTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSS
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEEC---cCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCC
Confidence 8999999999998731 013678999998 455666665532 245678999999999998864 5
Q ss_pred CcEEEEeccCceEEEe-cccCCC---------CeeEEEecCCCCEEEEe-------------------------------
Q psy7433 77 GDICVIDLRQRVIRSR-FNAHES---------PVKCLAIDPHEEFFVTG------------------------------- 115 (213)
Q Consensus 77 ~~v~iwd~~~~~~~~~-~~~~~~---------~i~~~~~~~~~~~l~~~------------------------------- 115 (213)
+.|.+||+.+++.+.. +..... ...-++++++++.++..
T Consensus 131 ~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (361)
T 2oiz_A 131 TSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALD 210 (361)
T ss_dssp EEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEEC
T ss_pred CeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEeccc
Confidence 7899999999988777 542110 01123333333332222
Q ss_pred -------cCCCcee------------ec--------------eE---EEEEccCCceEEEecC-----------CCcEEE
Q psy7433 116 -------AGDGDIK------------SP--------------VK---CLAIDPHEEFFVTGAG-----------DGDIKV 148 (213)
Q Consensus 116 -------~~~~~i~------------~~--------------v~---~~~~~~~~~~l~~~~~-----------dg~i~v 148 (213)
+.++.+. .. .. .++|+|+++.++++.. .+.|.+
T Consensus 211 g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~v 290 (361)
T 2oiz_A 211 KDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWV 290 (361)
T ss_dssp SSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEE
T ss_pred CCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEE
Confidence 1112111 00 01 1788999886666533 347999
Q ss_pred EEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCC
Q psy7433 149 WSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 149 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~ 205 (213)
||+.+.+.+..+..+ . +.+++++|++ +|++++. +.|.+||..++
T Consensus 291 iD~~t~~~v~~i~~~-----------~-p~~ia~spdg~~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 291 MDTKTKQRVARIPGR-----------D-ALSMTIDQQRNLMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp EETTTTEEEEEEECT-----------T-CCEEEEETTTTEEEEECS-SCEEEEECSSS
T ss_pred EECCCCcEEEEEecC-----------C-eeEEEECCCCCEEEEeCC-CeEEEEECCCC
Confidence 999999999988775 4 8889999976 4666665 99999999987
No 172
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.66 E-value=2.6e-13 Score=100.23 Aligned_cols=192 Identities=14% Similarity=0.168 Sum_probs=128.6
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC----Cc
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK----GD 78 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~ 78 (213)
+.++...+.+++|+|++++++++ ..++.|.+||.+ ..+.......+...+.+++++|+++++++...+ +.
T Consensus 40 ~~~~~~~~~~~~~~~~g~l~~~~---~~~~~i~~~d~~---~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~ 113 (333)
T 2dg1_A 40 ISKKGLQLEGLNFDRQGQLFLLD---VFEGNIFKINPE---TKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGG 113 (333)
T ss_dssp EESSCCCEEEEEECTTSCEEEEE---TTTCEEEEECTT---TCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCE
T ss_pred EeccCccccCcEECCCCCEEEEE---CCCCEEEEEeCC---CCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCce
Confidence 34556678899999999988777 678999999973 333333222455779999999999888877666 68
Q ss_pred EEEEeccCceEEEecc--cCCCCeeEEEecCCCCEEEEecC------CCcee----------------eceEEEEEccCC
Q psy7433 79 ICVIDLRQRVIRSRFN--AHESPVKCLAIDPHEEFFVTGAG------DGDIK----------------SPVKCLAIDPHE 134 (213)
Q Consensus 79 v~iwd~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~------~~~i~----------------~~v~~~~~~~~~ 134 (213)
|.+||..+++....+. .....+..++++|+++.+++... .+.+. ..+..++|+|++
T Consensus 114 i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg 193 (333)
T 2dg1_A 114 IFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDE 193 (333)
T ss_dssp EEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTS
T ss_pred EEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCC
Confidence 9999998776543332 23456889999999987776653 12222 246789999999
Q ss_pred ceE-EEecCCCcEEEEEccC-CeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeE-EEEecCCcEEEEeCC
Q psy7433 135 EFF-VTGAGDGDIKVWSLSG-NHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRL-FSCGADGSMKVRQLP 203 (213)
Q Consensus 135 ~~l-~~~~~dg~i~v~d~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l-~s~~~d~~i~iw~~~ 203 (213)
+++ ++.+.++.|.+||+.+ +.....+.... ..... ....+..+++++++.+ ++...++.|.+||..
T Consensus 194 ~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~--~~~~~-~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 194 KVLWVTETTANRLHRIALEDDGVTIQPFGATI--PYYFT-GHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp SEEEEEEGGGTEEEEEEECTTSSSEEEEEEEE--EEECC-SSSEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred CEEEEEeCCCCeEEEEEecCCCcCcccccceE--EEecC-CCCCCCceEECCCCCEEEEEcCCCEEEEECCC
Confidence 855 4556678999999863 33222111000 00000 0035778999987765 444567899999984
No 173
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.65 E-value=4e-15 Score=119.59 Aligned_cols=183 Identities=11% Similarity=0.073 Sum_probs=119.5
Q ss_pred EEEEe--CCCCe-EEEeeccCCCccEEEEeCCCcccc-cceeeeee-----ecCCceEEEEecCCCEEEEEcCC------
Q psy7433 12 DFVFL--GSCSL-VATAGHSSESKNVCLWDSLLPQKK-ALVQAFVC-----HDQGASSLVFAPQHQLLISAGKK------ 76 (213)
Q Consensus 12 ~~~~~--~~~~~-l~~~g~~s~~~~i~iwd~~~~~~~-~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d------ 76 (213)
...|+ |||+. |+.+. ..+..|.++++.. .+ .....+.. |...+..++|+|+|+.|++++.+
T Consensus 81 ~~~~~~SPDg~~~la~~~--~~~~~l~~~~~~~--~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~ 156 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTH--FGDQRLYAFEPDA--PGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGP 156 (662)
T ss_dssp CEEEECCSSSSCEEEEEB--TTTCCEEEECTTS--TTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSST
T ss_pred cceeeeecCCCeEEEEEE--CCCCeEEEEcCCC--CCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCC
Confidence 56666 99998 88763 2356666666520 01 22333433 45567899999999999988876
Q ss_pred ----CcEEEEeccC------ceEEEecc-cCCCCeeEEEecCCCCEEEEecCC-------------------C---cee-
Q psy7433 77 ----GDICVIDLRQ------RVIRSRFN-AHESPVKCLAIDPHEEFFVTGAGD-------------------G---DIK- 122 (213)
Q Consensus 77 ----~~v~iwd~~~------~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~~-------------------~---~i~- 122 (213)
..|.+||+.+ ++.. .+. .+...+..++|+|||++|+.++.+ + ...
T Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~ 235 (662)
T 3azo_A 157 SDVRRFLAAVPLDGSAAADRSAVR-ELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRT 235 (662)
T ss_dssp TCEEEEEEEEETTSTTTTCGGGSE-ESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEE
T ss_pred CCceeEEEEEECCCCccccCCcee-EEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEE
Confidence 5899999988 5543 444 555678889999999999876633 2 111
Q ss_pred ------eceEEEEEccCCceEEEecCCC--cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEec
Q psy7433 123 ------SPVKCLAIDPHEEFFVTGAGDG--DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGA 193 (213)
Q Consensus 123 ------~~v~~~~~~~~~~~l~~~~~dg--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~ 193 (213)
..+..+.|+|||+++++++.++ .|.+||+.+++.......+..... ......+..++++|++. +++++.
T Consensus 236 l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~--p~w~~~~~~~~~~~~~~~~~~~~~ 313 (662)
T 3azo_A 236 LLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAG--PLWTPGMRWFAPLANGLIAVVHGK 313 (662)
T ss_dssp EEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSC--CCCSTTCCSEEECTTSCEEEEEBS
T ss_pred eCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccC--ccccccCceEeEeCCCEEEEEEEc
Confidence 4567889999999888888888 566666656655433332211000 00001155688888655 667777
Q ss_pred CCcEEEEeC
Q psy7433 194 DGSMKVRQL 202 (213)
Q Consensus 194 d~~i~iw~~ 202 (213)
+.++||.+
T Consensus 314 -~~~~l~~~ 321 (662)
T 3azo_A 314 -GAAVLGIL 321 (662)
T ss_dssp -SSCEEEEE
T ss_pred -CccEEEEE
Confidence 99999944
No 174
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.64 E-value=7.8e-14 Score=100.63 Aligned_cols=169 Identities=12% Similarity=0.120 Sum_probs=130.4
Q ss_pred CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeec-CCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccC
Q psy7433 18 SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHD-QGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAH 96 (213)
Q Consensus 18 ~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~ 96 (213)
.+++|+++ +.++.|.+||. ++++.+..+..+. ..+.++.++|+|+++++ .++.|..||. +++.+..+...
T Consensus 4 ~~~~lv~~---~~~~~v~~~d~---~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~-~G~~~W~~~~~ 74 (276)
T 3no2_A 4 PQHLLVGG---SGWNKIAIINK---DTKEIVWEYPLEKGWECNSVAATKAGEILFS--YSKGAKMITR-DGRELWNIAAP 74 (276)
T ss_dssp CCEEEEEC---TTCSEEEEEET---TTTEEEEEEECCTTCCCCEEEECTTSCEEEE--CBSEEEEECT-TSCEEEEEECC
T ss_pred CCcEEEee---CCCCEEEEEEC---CCCeEEEEeCCCccCCCcCeEECCCCCEEEe--CCCCEEEECC-CCCEEEEEcCC
Confidence 46788887 79999999997 5778888887665 47899999999998883 4678999998 88888888764
Q ss_pred -CCCeeEEEecCCCCEEEEecC-CCcee----------------------eceEEEEEccCCceEEEecCCCcEEEEEcc
Q psy7433 97 -ESPVKCLAIDPHEEFFVTGAG-DGDIK----------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLS 152 (213)
Q Consensus 97 -~~~i~~~~~~~~~~~l~~~~~-~~~i~----------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~ 152 (213)
...+.++.+.|+++.+++.+. ++.+. .....+++.++|+++++...++.|..||..
T Consensus 75 ~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~ 154 (276)
T 3no2_A 75 AGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN 154 (276)
T ss_dssp TTCEEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT
T ss_pred CCccccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC
Confidence 346888999999999888766 44443 123345678899999999999999999987
Q ss_pred CCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 153 GNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
++.+.++.... .+.++...+++ .++++..++.|..+|..+++.
T Consensus 155 -G~~~w~~~~~~-----------~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 155 -GQLLNSVKLSG-----------TPFSSAFLDNGDCLVACGDAHCFVQLNLESNRI 198 (276)
T ss_dssp -SCEEEEEECSS-----------CCCEEEECTTSCEEEECBTTSEEEEECTTTCCE
T ss_pred -CCEEEEEECCC-----------CccceeEcCCCCEEEEeCCCCeEEEEeCcCCcE
Confidence 89888887642 34455666654 566677777899999886654
No 175
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.64 E-value=5.8e-14 Score=104.20 Aligned_cols=175 Identities=15% Similarity=0.140 Sum_probs=116.0
Q ss_pred ceEEEEEeCCCCeEEEeeccC--CCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC----------
Q psy7433 9 ITSDFVFLGSCSLVATAGHSS--ESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK---------- 76 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s--~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------- 76 (213)
.+..++|+|+|+.||...... ....|.+|++. .++... +..+.. +..++|+|+++.|+.++.+
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~---~g~~~~-l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~ 134 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLE---TLSSKK-ILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFE 134 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETT---TTEEEE-EEEESE-EEEEEECTTSSEEEEEEECCCC-------
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECC---CCceEE-EEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEE
Confidence 467799999999999873211 12247777873 333332 222334 8999999999988887632
Q ss_pred -----------------CcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCC---------cee--------
Q psy7433 77 -----------------GDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDG---------DIK-------- 122 (213)
Q Consensus 77 -----------------~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~---------~i~-------- 122 (213)
..|.+||+.+++.+..+.. . .+..++|+|++ .++++..+. .+.
T Consensus 135 ~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~ 211 (347)
T 2gop_A 135 DDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEE 211 (347)
T ss_dssp --CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEE
T ss_pred cccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCceE
Confidence 5799999998876445544 3 78899999999 777665432 111
Q ss_pred ---eceEEEEEccCCceEEEecCC--------CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEE-EEeCCCCeEEE
Q psy7433 123 ---SPVKCLAIDPHEEFFVTGAGD--------GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQ-LHVDGGSRLFS 190 (213)
Q Consensus 123 ---~~v~~~~~~~~~~~l~~~~~d--------g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~l~s 190 (213)
.......++|+|++|+.++.+ ..|.+|| +++.......+. ..+.. +.|+ ++.+++
T Consensus 212 ~l~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~----------~~~~~~~~~s-dg~~~~ 278 (347)
T 2gop_A 212 KMFEKVSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVD----------RGVGQAKIKD-GKVYFT 278 (347)
T ss_dssp EEEEEESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCC----------SEEEEEEEET-TEEEEE
T ss_pred EeccCcceeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCC----------cccCCccEEc-CcEEEE
Confidence 101123348999988776643 3678888 554443333332 45775 8898 667788
Q ss_pred EecCCcEEEEeCCCC
Q psy7433 191 CGADGSMKVRQLPDR 205 (213)
Q Consensus 191 ~~~d~~i~iw~~~~~ 205 (213)
++.++.++|| +.++
T Consensus 279 ~~~~~~~~l~-~~~g 292 (347)
T 2gop_A 279 LFEEGSVNLY-IWDG 292 (347)
T ss_dssp EEETTEEEEE-EESS
T ss_pred EecCCcEEEE-EcCC
Confidence 8899999999 8743
No 176
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.64 E-value=1.3e-13 Score=98.78 Aligned_cols=182 Identities=8% Similarity=0.004 Sum_probs=129.3
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee-eecCCceEEEEecCCCEEEEEcCCCcEEEEeccC
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV-CHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQ 86 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~ 86 (213)
..+.+++++++++++++. . ++.|.+||.+ .. ....+. .....+..++++++++++++...++.|.+|+..+
T Consensus 67 ~~p~~i~~~~~g~l~v~~---~-~~~i~~~d~~---~~-~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~ 138 (270)
T 1rwi_B 67 YQPQGLAVDGAGTVYVTD---F-NNRVVTLAAG---SN-NQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGS 138 (270)
T ss_dssp CSCCCEEECTTCCEEEEE---T-TTEEEEECTT---CS-CCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTC
T ss_pred CCcceeEECCCCCEEEEc---C-CCEEEEEeCC---Cc-eEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCC
Confidence 467889999999977776 4 8899999973 22 222222 2235688999999998777777788999998665
Q ss_pred ceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCCcEEEE
Q psy7433 87 RVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGDIKVW 149 (213)
Q Consensus 87 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~ 149 (213)
.............+..++++|+++.+++...++.+. ..+..++++++|.++++...++.|.+|
T Consensus 139 ~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~ 218 (270)
T 1rwi_B 139 KTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKL 218 (270)
T ss_dssp CSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEE
T ss_pred ceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEE
Confidence 543332222334678999999998777666555543 457889999999877777778899999
Q ss_pred EccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEecCCcEEEEeCCCCcc
Q psy7433 150 SLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 150 d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d~~i~iw~~~~~~~ 207 (213)
|............+ ...+.++++++++. +++...++.|+++++...+.
T Consensus 219 ~~~~~~~~~~~~~~----------~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 219 LAGSTTSTVLPFTG----------LNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp CTTCSCCEECCCCS----------CSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred cCCCCcceeeccCC----------CCCceeEEECCCCCEEEEECCCCEEEEEcCCCccc
Confidence 98654332211111 14688999998665 56667889999999987643
No 177
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.63 E-value=2.4e-14 Score=115.88 Aligned_cols=187 Identities=10% Similarity=0.024 Sum_probs=122.4
Q ss_pred cccCceEEEEEeCCCCeEEEeec--cCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCc----
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGH--SSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGD---- 78 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~--~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~---- 78 (213)
+|...+.+++|||||++||.+.. ++.+..|++||+. +++.+............++|+|+|+.|+.++.+..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~---tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~ 194 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD---SGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIK 194 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT---TCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSC
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC---CCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCc
Confidence 45557899999999999994321 1455789999994 33332010111112268999999999999888765
Q ss_pred ---------EEEEeccCce----EEEecccCCCCeeEEEecCCCCEEEEecCCC----cee----------------ece
Q psy7433 79 ---------ICVIDLRQRV----IRSRFNAHESPVKCLAIDPHEEFFVTGAGDG----DIK----------------SPV 125 (213)
Q Consensus 79 ---------v~iwd~~~~~----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~----~i~----------------~~v 125 (213)
|++|++.+++ .+.....+...+..+.|+|++++++..+.++ .+. ..+
T Consensus 195 ~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~ 274 (695)
T 2bkl_A 195 VDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAK 274 (695)
T ss_dssp GGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCC
T ss_pred cccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCce
Confidence 9999998765 3333344556788999999999888776554 222 233
Q ss_pred EEEEEccCCceEEEec---CCCcEEEEEccCCee--eeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEE
Q psy7433 126 KCLAIDPHEEFFVTGA---GDGDIKVWSLSGNHL--LYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVR 200 (213)
Q Consensus 126 ~~~~~~~~~~~l~~~~---~dg~i~v~d~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw 200 (213)
....+ +++++++.+. .++.|.+||+.++.. ...+..+.. ...+..++++.+..+++...|+..++|
T Consensus 275 ~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~--------~~~l~~~~~~~~~lv~~~~~dg~~~l~ 345 (695)
T 2bkl_A 275 YEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDS--------SASLLSVSIVGGHLSLEYLKDATSEVR 345 (695)
T ss_dssp EEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCS--------SCEEEEEEEETTEEEEEEEETTEEEEE
T ss_pred EEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCC--------CCeEEEEEEECCEEEEEEEECCEEEEE
Confidence 44445 5666444443 257899999876542 122222221 145778888855567888899988888
Q ss_pred eCC
Q psy7433 201 QLP 203 (213)
Q Consensus 201 ~~~ 203 (213)
.+.
T Consensus 346 ~~~ 348 (695)
T 2bkl_A 346 VAT 348 (695)
T ss_dssp EEE
T ss_pred EEe
Confidence 654
No 178
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.61 E-value=5.3e-13 Score=95.57 Aligned_cols=181 Identities=8% Similarity=0.016 Sum_probs=125.3
Q ss_pred ceEEEEEeCCCCeEE-EeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCc
Q psy7433 9 ITSDFVFLGSCSLVA-TAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR 87 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~-~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~ 87 (213)
...+++++|+|++++ +. ..++.|.+|+.. ..............+..++++++++++++.. ++.|..||....
T Consensus 25 ~p~~i~~~~~g~l~v~~~---~~~~~i~~~~~~---~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~ 97 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSE---GMYGRVVKLATG---STGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSN 97 (270)
T ss_dssp CEEEEEECTTCCEEEEEC---SSSCEEEEECC--------EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCS
T ss_pred CccceEECCCCCEEEEcc---CCCCcEEEecCC---CcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCc
Confidence 678999999999777 54 467899999963 2221111112334678899999998666665 889999998765
Q ss_pred eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCCcEEEEE
Q psy7433 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWS 150 (213)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d 150 (213)
............+..++++|+++.+++...++.+. ..+..++++|+++++++...++.|.+||
T Consensus 98 ~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~ 177 (270)
T 1rwi_B 98 NQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLE 177 (270)
T ss_dssp CCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEEC
T ss_pred eEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEe
Confidence 43322122335688999999998777765555543 3568899999999777777788999999
Q ss_pred ccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEE-EEecCCcEEEEeCCCCc
Q psy7433 151 LSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLF-SCGADGSMKVRQLPDRD 206 (213)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~-s~~~d~~i~iw~~~~~~ 206 (213)
.............. ..+.++++++++.+. +...++.|.+|+.....
T Consensus 178 ~~~~~~~~~~~~~~----------~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~ 224 (270)
T 1rwi_B 178 AESNNQVVLPFTDI----------TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT 224 (270)
T ss_dssp TTTCCEEECCCSSC----------CSEEEEEECTTCCEEEEETTTSCEEEECTTCSC
T ss_pred cCCCceEeecccCC----------CCceEEEECCCCCEEEEECCCCcEEEEcCCCCc
Confidence 87655433222211 468899999876654 44457899999987643
No 179
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.61 E-value=2.7e-14 Score=116.29 Aligned_cols=178 Identities=11% Similarity=0.051 Sum_probs=118.3
Q ss_pred EEEEEeCCCCeEEEeeccCCC---------ccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 11 SDFVFLGSCSLVATAGHSSES---------KNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 11 ~~~~~~~~~~~l~~~g~~s~~---------~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
.++.|||||++|+.+ +.+ +.+.+||+. +++ ...+..+...+...+|||||+.|+.+. ++.|++
T Consensus 65 ~~~~~Spdg~~l~~~---~~~~~~~r~~~~~~~~~~d~~---~~~-~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~ 136 (740)
T 4a5s_A 65 NDYSISPDGQFILLE---YNYVKQWRHSYTASYDIYDLN---KRQ-LITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYV 136 (740)
T ss_dssp CEEEECTTSSEEEEE---EEEEECSSSCEEEEEEEEETT---TTE-ECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEE
T ss_pred cceEECCCCCEEEEE---ECCeeeEEEccceEEEEEECC---CCc-EEEcccCCCcceeeEECCCCCEEEEEE-CCeEEE
Confidence 458899999999988 343 677899984 333 233555677899999999999999884 689999
Q ss_pred EeccCceEEEecc-cCCCC-----------------eeEEEecCCCCEEEEecCCCc-----------------------
Q psy7433 82 IDLRQRVIRSRFN-AHESP-----------------VKCLAIDPHEEFFVTGAGDGD----------------------- 120 (213)
Q Consensus 82 wd~~~~~~~~~~~-~~~~~-----------------i~~~~~~~~~~~l~~~~~~~~----------------------- 120 (213)
||+.+++..+... ++... ...+.|+|||+.|+..+.|..
T Consensus 137 ~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~ 216 (740)
T 4a5s_A 137 KIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRV 216 (740)
T ss_dssp ESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEE
T ss_pred EECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceee
Confidence 9998876544221 22211 235899999999887642211
Q ss_pred -------------e----------------e------------eceEEEEEccCCceEEEecC----CCcEEEEEccCCe
Q psy7433 121 -------------I----------------K------------SPVKCLAIDPHEEFFVTGAG----DGDIKVWSLSGNH 155 (213)
Q Consensus 121 -------------i----------------~------------~~v~~~~~~~~~~~l~~~~~----dg~i~v~d~~~~~ 155 (213)
+ . ..+..++|+|||+.++.... +..|.+||+.+++
T Consensus 217 ~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 217 PYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp ECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred cCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 0 0 12567899999996655432 3479999998876
Q ss_pred ----eee--ee--cCCCCceeEEEecCCCe-----EEEEeCCCCe-EE-EEe-cCC--cEEEEeCCCCc
Q psy7433 156 ----LLY--NF--PGEHARSSFFKHIGQGV-----TQLHVDGGSR-LF-SCG-ADG--SMKVRQLPDRD 206 (213)
Q Consensus 156 ----~~~--~~--~~~~~~~~~~~~~~~~v-----~~~~~~~~~~-l~-s~~-~d~--~i~iw~~~~~~ 206 (213)
+.. .+ ..+. ..+ ....|+|++. |+ ..+ .+| .|++||+..+.
T Consensus 297 ~~~~~~~~~~l~~~~~~----------~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~ 355 (740)
T 4a5s_A 297 GRWNCLVARQHIEMSTT----------GWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKD 355 (740)
T ss_dssp TEEEECGGGCEEEECSS----------SCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSS
T ss_pred cccceeEEEEeeeccCC----------ceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCc
Confidence 221 11 2222 222 3678999764 44 454 344 68888887653
No 180
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.60 E-value=1.4e-14 Score=109.02 Aligned_cols=188 Identities=8% Similarity=-0.082 Sum_probs=120.0
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEE--EecCCCEEEEE---------
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLV--FAPQHQLLISA--------- 73 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~l~~~--------- 73 (213)
+|...+....|+|+|+.|+.+ +.++.|++||+. .++.......+...+.... ++|++++++..
T Consensus 78 ~~~~~~~~~~~spdg~~l~~~---~~~~~l~~~d~~---~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~ 151 (388)
T 3pe7_A 78 GRGDNTFGGFLSPDDDALFYV---KDGRNLMRVDLA---TLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVP 151 (388)
T ss_dssp SSCBCSSSCEECTTSSEEEEE---ETTTEEEEEETT---TCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCC
T ss_pred CCCCCccceEEcCCCCEEEEE---eCCCeEEEEECC---CCcceeeeechhhcccccceeECCCCCeeccccccCccccc
Confidence 444455567899999999998 578899999984 3433333443444443343 48899888742
Q ss_pred -------------cCCCcEEEEeccCceEEEecccCCCCeeEEEecC-CCCEEEEecCCC------cee-----------
Q psy7433 74 -------------GKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDP-HEEFFVTGAGDG------DIK----------- 122 (213)
Q Consensus 74 -------------~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~------~i~----------- 122 (213)
..+..|.+||+.+++.... ..+...+..++|+| +++.++.....+ .+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l-~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~ 230 (388)
T 3pe7_A 152 LTDWKKFHEFYFTKPCCRLMRVDLKTGESTVI-LQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRK 230 (388)
T ss_dssp CCSHHHHHHHGGGCCCEEEEEEETTTCCEEEE-EEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEE
T ss_pred ccccchhhhhhccCCcceEEEEECCCCceEEe-ecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEE
Confidence 2447899999998865443 34566789999999 999888766532 222
Q ss_pred -------eceEEEEEccCCceEEEecC-CC----cEEEEEccCCeee--eeecCCCCceeEEEecCCCeEEEEeCCCCe-
Q psy7433 123 -------SPVKCLAIDPHEEFFVTGAG-DG----DIKVWSLSGNHLL--YNFPGEHARSSFFKHIGQGVTQLHVDGGSR- 187 (213)
Q Consensus 123 -------~~v~~~~~~~~~~~l~~~~~-dg----~i~v~d~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~- 187 (213)
..+..+.|+|+|+.|+..+. ++ .|.+||+.+++.. ..+..+. .... ....+.|+|++.
T Consensus 231 l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~---~~~~----~~~~~~~spdg~~ 303 (388)
T 3pe7_A 231 VKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACS---HLMS----NYDGSLMVGDGSD 303 (388)
T ss_dssp SCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEE---EEEE----CTTSSEEEEEECC
T ss_pred eeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCce---eeee----cCCCCeEccCCCc
Confidence 24677899999997755433 22 3999999877643 2332200 0000 011125787653
Q ss_pred EEEE---------ecCCcEEEEeCCCCc
Q psy7433 188 LFSC---------GADGSMKVRQLPDRD 206 (213)
Q Consensus 188 l~s~---------~~d~~i~iw~~~~~~ 206 (213)
|+.. ..+..|++||+.+++
T Consensus 304 l~~~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (388)
T 3pe7_A 304 APVDVQDDSGYKIENDPFLYVFNMKNGT 331 (388)
T ss_dssp C------------CCCCEEEEEETTTTE
T ss_pred ceeEeeeccccccCCCCEEEEEeccCCc
Confidence 4432 456689999998764
No 181
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.59 E-value=5.2e-15 Score=111.52 Aligned_cols=184 Identities=8% Similarity=-0.032 Sum_probs=112.9
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCC-ceEEEEecCCCEEEEEcCCCcEEEEeccCce
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQG-ASSLVFAPQHQLLISAGKKGDICVIDLRQRV 88 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~ 88 (213)
+.+++|+|+|++|+.......+..|.+||+. .++.. .+..+... ...+.|+|++++|+.++.++.|.+||+.+++
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~---~~~~~-~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~ 113 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLE---TQQAV-QLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLE 113 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETT---TTEEE-ECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCC
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECC---CCcEE-EeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCC
Confidence 6778999999998877321123468888873 33322 22222222 3347899999999999888899999998886
Q ss_pred EEEecccCCCCeeE-------------------EEecCCCCEEEEec-----CCCcee----------------eceEEE
Q psy7433 89 IRSRFNAHESPVKC-------------------LAIDPHEEFFVTGA-----GDGDIK----------------SPVKCL 128 (213)
Q Consensus 89 ~~~~~~~~~~~i~~-------------------~~~~~~~~~l~~~~-----~~~~i~----------------~~v~~~ 128 (213)
.......+...... ..++|+++.++... .+..+. ..+..+
T Consensus 114 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~ 193 (396)
T 3c5m_A 114 EQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHP 193 (396)
T ss_dssp EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEE
T ss_pred cEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccc
Confidence 55444433322212 34566554433221 111121 457788
Q ss_pred EEcc-CCceEEEecCC------CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEecC-----C
Q psy7433 129 AIDP-HEEFFVTGAGD------GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGAD-----G 195 (213)
Q Consensus 129 ~~~~-~~~~l~~~~~d------g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d-----~ 195 (213)
.|+| +++.|+..+.+ ..|.+||+..++...... +.. ...+..+.|+|++. |+..+.+ +
T Consensus 194 ~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~~~--------~~~~~~~~~spdg~~l~~~~~~~~~~~~ 264 (396)
T 3c5m_A 194 IYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE-HAE--------GESCTHEFWIPDGSAMAYVSYFKGQTDR 264 (396)
T ss_dssp EEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC-CCT--------TEEEEEEEECTTSSCEEEEEEETTTCCE
T ss_pred eECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec-cCC--------CccccceEECCCCCEEEEEecCCCCccc
Confidence 9999 78866655443 368888886554322222 210 13578899999764 6666543 4
Q ss_pred cEEEEeCCCCc
Q psy7433 196 SMKVRQLPDRD 206 (213)
Q Consensus 196 ~i~iw~~~~~~ 206 (213)
.|++||+.+++
T Consensus 265 ~l~~~d~~~g~ 275 (396)
T 3c5m_A 265 VIYKANPETLE 275 (396)
T ss_dssp EEEEECTTTCC
T ss_pred eEEEEECCCCC
Confidence 49999998764
No 182
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.59 E-value=5.3e-13 Score=108.30 Aligned_cols=189 Identities=6% Similarity=-0.017 Sum_probs=120.7
Q ss_pred ccCceEEEEEeCCCCeEEEeec--cCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCc-----
Q psy7433 6 HNKITSDFVFLGSCSLVATAGH--SSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGD----- 78 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~--~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~----- 78 (213)
|...+..++|||||++||.+.. ++....|++||+. +++.+.... ....+..++|+|||+.|+.++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~---tg~~~~~~~-~~~~~~~~~wspDg~~l~~~~~~~~~~~~~ 198 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVD---GAKELPDVL-ERVKFSCMAWTHDGKGMFYNAYPQQDGKSD 198 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETT---TTEEEEEEE-EEECSCCEEECTTSSEEEEEECCCCSSCCS
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECC---CCCCCcccc-cCcccceEEEEeCCCEEEEEEECCcccccc
Confidence 4446889999999999997731 0111289999994 444333222 2233678999999999998887765
Q ss_pred -----------EEEEeccCce----EEEecccCCCCeeEEEecCCCCEEEEecC-----CCcee-----e------c---
Q psy7433 79 -----------ICVIDLRQRV----IRSRFNAHESPVKCLAIDPHEEFFVTGAG-----DGDIK-----S------P--- 124 (213)
Q Consensus 79 -----------v~iwd~~~~~----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-----~~~i~-----~------~--- 124 (213)
|++|++.+++ .+.....+...+..+.|+|++++|+..+. +..+. . .
T Consensus 199 ~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 278 (710)
T 2xdw_A 199 GTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILK 278 (710)
T ss_dssp SSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCC
T ss_pred ccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccc
Confidence 9999998764 22222334556789999999998887654 22222 1 1
Q ss_pred eEE---------EEEccCCceEEEecCC----CcEEEEEccCCee--eeeecCCCCceeEEEecCCCeEEEEeCCCCe-E
Q psy7433 125 VKC---------LAIDPHEEFFVTGAGD----GDIKVWSLSGNHL--LYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-L 188 (213)
Q Consensus 125 v~~---------~~~~~~~~~l~~~~~d----g~i~v~d~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l 188 (213)
+.. -.|+|+|+.|+..+.. +.|.+||+.++.. ...+..+... ..+..+.|++++. +
T Consensus 279 ~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~--------~~~~~~~~~~~~~lv 350 (710)
T 2xdw_A 279 WVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEK--------DVLEWVACVRSNFLV 350 (710)
T ss_dssp CEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSS--------CEEEEEEEETTTEEE
T ss_pred eEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCC--------CeEEEEEEEcCCEEE
Confidence 111 2477888866655442 3699999876631 2333333210 2577888886554 6
Q ss_pred EEEecCCc--EEEEeCCCCc
Q psy7433 189 FSCGADGS--MKVRQLPDRD 206 (213)
Q Consensus 189 ~s~~~d~~--i~iw~~~~~~ 206 (213)
++...|+. |.+|++.+++
T Consensus 351 ~~~~~~g~~~l~~~~~~~g~ 370 (710)
T 2xdw_A 351 LCYLHDVKNTLQLHDLATGA 370 (710)
T ss_dssp EEEEETTEEEEEEEETTTCC
T ss_pred EEEEECCEEEEEEEECCCCC
Confidence 77777874 5566764543
No 183
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.58 E-value=2.9e-13 Score=101.50 Aligned_cols=165 Identities=11% Similarity=0.077 Sum_probs=117.9
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccc--------ccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEE
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQK--------KALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDIC 80 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 80 (213)
+++.+++++...+++++| .+ .+++|++....+ .+... ...+.. |+.++| ++++|+++ .++.|+
T Consensus 39 ~~nlLais~~~gll~a~~---~~-~l~v~~~~~l~~~~~~~~~~~~~~~-~~~lp~-V~~l~f--d~~~L~v~-~~~~l~ 109 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAAS---GS-KAVVGELQLLRDHITSDSTPLTFKW-EKEIPD-VIFVCF--HGDQVLVS-TRNALY 109 (388)
T ss_dssp CCBCEEEETTTTEEEEEE---TT-EEEEEEHHHHHHHHHSSSCCCCCSE-EEECTT-EEEEEE--ETTEEEEE-ESSEEE
T ss_pred cccEEEEcCCCCEEEEeC---CC-EEEEEEhhHhhhhhccccccccceE-EeeCCC-eeEEEE--CCCEEEEE-cCCcEE
Confidence 689999999999999984 44 667798732210 11112 223556 999999 88999999 889999
Q ss_pred EEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-------------eceEEEEEccCCceEEEecCCCcEE
Q psy7433 81 VIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-------------SPVKCLAIDPHEEFFVTGAGDGDIK 147 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-------------~~v~~~~~~~~~~~l~~~~~dg~i~ 147 (213)
+||+++.........+..++.++.+.+. .++++..||.+. ..|+|++|+|+| ++.|..||.++
T Consensus 110 v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~~~~~Vs~v~WSpkG--~~vg~~dg~i~ 185 (388)
T 1xip_A 110 SLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQLAQNVTSFDVTNSQ--LAVLLKDRSFQ 185 (388)
T ss_dssp EEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEEEESEEEEEECSSE--EEEEETTSCEE
T ss_pred EEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccccccCCceEEEEcCCc--eEEEEcCCcEE
Confidence 9999876544445556677888777654 388888898876 689999999999 67888999999
Q ss_pred EEEccCCee--eeeecCCCCceeEEEecCCCeEEEEeCCCCe
Q psy7433 148 VWSLSGNHL--LYNFPGEHARSSFFKHIGQGVTQLHVDGGSR 187 (213)
Q Consensus 148 v~d~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 187 (213)
+|+....+. ..++..+..... ...+...|.++.|.+++.
T Consensus 186 ~~~~~~~~~~~k~~I~~Pp~~~~-~~~~~~~V~sI~wl~~~~ 226 (388)
T 1xip_A 186 SFAWRNGEMEKQFEFSLPSELEE-LPVEEYSPLSVTILSPQD 226 (388)
T ss_dssp EEEEETTEEEEEEEECCCHHHHT-SCTTTSEEEEEEESSSSE
T ss_pred EEcCCCccccccceecCCccccc-ccCCCeeEEEEEEecCCe
Confidence 999887775 555532110000 000126799999998765
No 184
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.56 E-value=7.5e-13 Score=95.50 Aligned_cols=178 Identities=10% Similarity=0.068 Sum_probs=127.7
Q ss_pred cccccc-CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeec-CCceEEEEecCCCEEEEEcC-CCc
Q psy7433 2 TYQCHN-KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHD-QGASSLVFAPQHQLLISAGK-KGD 78 (213)
Q Consensus 2 ~l~~h~-~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~-d~~ 78 (213)
++..+. ..+.++.+.|+|+++++. ++.|..||. +++.+..+..+. ..+.++.+.++|+++++.+. ++.
T Consensus 30 ~~~~~~~~~~~~~~~~pdG~ilvs~-----~~~V~~~d~----~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~ 100 (276)
T 3no2_A 30 EYPLEKGWECNSVAATKAGEILFSY-----SKGAKMITR----DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPST 100 (276)
T ss_dssp EEECCTTCCCCEEEECTTSCEEEEC-----BSEEEEECT----TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEE
T ss_pred EeCCCccCCCcCeEECCCCCEEEeC-----CCCEEEECC----CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCE
Confidence 344444 468899999999999943 677999995 466777776542 46788999999999998876 778
Q ss_pred EEEEeccCceEEEeccc------CCCCeeEEEecCCCCEEEEecCCCcee---------------eceEEEEEccCCceE
Q psy7433 79 ICVIDLRQRVIRSRFNA------HESPVKCLAIDPHEEFFVTGAGDGDIK---------------SPVKCLAIDPHEEFF 137 (213)
Q Consensus 79 v~iwd~~~~~~~~~~~~------~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------~~v~~~~~~~~~~~l 137 (213)
+..+|. +++.+..+.. +......++..++++++++...++.+. ..+.++...++++++
T Consensus 101 v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G~~~w~~~~~~~~~~~~~~~~g~~~ 179 (276)
T 3no2_A 101 ILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQLLNSVKLSGTPFSSAFLDNGDCL 179 (276)
T ss_dssp EEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTTSCEEEEEECSSCCCEEEECTTSCEE
T ss_pred EEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCCCCEEEEEECCCCccceeEcCCCCEE
Confidence 888885 6766655542 112355677889999999888887775 356678888999999
Q ss_pred EEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEec
Q psy7433 138 VTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGA 193 (213)
Q Consensus 138 ~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~ 193 (213)
+++..++.|..+|..+++.+.++........ .-..+..+...+++.++.++.
T Consensus 180 v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~----~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 180 VACGDAHCFVQLNLESNRIVRRVNANDIEGV----QLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EECBTTSEEEEECTTTCCEEEEEEGGGSBSC----CCSEEEEEEECTTSCEEEEEE
T ss_pred EEeCCCCeEEEEeCcCCcEEEEecCCCCCCc----cccccccceEcCCCCEEEEec
Confidence 9998888999999999999888764321100 002366777777666544443
No 185
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.55 E-value=2.9e-13 Score=99.99 Aligned_cols=178 Identities=15% Similarity=0.157 Sum_probs=126.3
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccC
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQ 86 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~ 86 (213)
...|.++.|+|++..++.. +.++.++.|.- .....+..+...+.+++|++++++++++..++.|.+||..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~ 75 (333)
T 2dg1_A 5 QQDLPTLFYSGKSNSAVPI---ISESELQTITA------EPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPET 75 (333)
T ss_dssp -CCCCBCCSCGGGGCSSCC---CCGGGSCEEEC------EEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTT
T ss_pred ccccceeeecCCccceeEE---eecccCccccc------ceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCC
Confidence 4568889999988888777 57889999942 23344555566778999999999888888899999999988
Q ss_pred ceEEEecccCCCCeeEEEecCCCCEEEEecCC----Ccee-------------------eceEEEEEccCCceEEEecC-
Q psy7433 87 RVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD----GDIK-------------------SPVKCLAIDPHEEFFVTGAG- 142 (213)
Q Consensus 87 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~----~~i~-------------------~~v~~~~~~~~~~~l~~~~~- 142 (213)
++.......+...+.+++++|+++.+++...+ +.+. ..+..++++|+|+++++...
T Consensus 76 ~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~ 155 (333)
T 2dg1_A 76 KEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRG 155 (333)
T ss_dssp CCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCC
T ss_pred CcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccc
Confidence 87655443456779999999999887776655 3332 24778999999987776653
Q ss_pred -----CCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-E-EEEecCCcEEEEeCCC
Q psy7433 143 -----DGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-L-FSCGADGSMKVRQLPD 204 (213)
Q Consensus 143 -----dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l-~s~~~d~~i~iw~~~~ 204 (213)
.+.|..+|..+++....... ...+..++|+|++. | ++.+.++.|.+|++.+
T Consensus 156 ~~~~~~~~l~~~~~~~~~~~~~~~~-----------~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 156 YSTNPLGGVYYVSPDFRTVTPIIQN-----------ISVANGIALSTDEKVLWVTETTANRLHRIALED 213 (333)
T ss_dssp BTTBCCEEEEEECTTSCCEEEEEEE-----------ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred cccCCCceEEEEeCCCCEEEEeecC-----------CCcccceEECCCCCEEEEEeCCCCeEEEEEecC
Confidence 24566666554333222111 13578899999763 5 4445678999999964
No 186
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.55 E-value=4.8e-14 Score=106.26 Aligned_cols=175 Identities=6% Similarity=-0.119 Sum_probs=113.8
Q ss_pred EEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceE-------------------EEEecCCCEEEE
Q psy7433 12 DFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASS-------------------LVFAPQHQLLIS 72 (213)
Q Consensus 12 ~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~l~~ 72 (213)
.+.|+|+|+.|+.+ +.++.|.+||+. ..+.......+...... +.|+|+++.++.
T Consensus 85 ~~~~spdg~~l~~~---~~~~~l~~~d~~---~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~ 158 (396)
T 3c5m_A 85 GGFISTDERAFFYV---KNELNLMKVDLE---TLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKF 158 (396)
T ss_dssp TCEECTTSSEEEEE---ETTTEEEEEETT---TCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHH
T ss_pred cceECCCCCEEEEE---EcCCcEEEEECC---CCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceee
Confidence 37899999999888 577789999984 33322222222221111 345667766554
Q ss_pred E-----cCCCcEEEEeccCceEEEecccCCCCeeEEEecC-CCCEEEEecCCC------cee------------------
Q psy7433 73 A-----GKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDP-HEEFFVTGAGDG------DIK------------------ 122 (213)
Q Consensus 73 ~-----~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~------~i~------------------ 122 (213)
. ..+..|.+||+.+++..... .+...+..+.|+| ++..++..+.+. .+.
T Consensus 159 ~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~ 237 (396)
T 3c5m_A 159 AEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEG 237 (396)
T ss_dssp HHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTT
T ss_pred eeeccCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCC
Confidence 3 35678999999888765444 3566788999999 788776655432 222
Q ss_pred eceEEEEEccCCceEEEecCC-----CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC-CCe-EEEEe---
Q psy7433 123 SPVKCLAIDPHEEFFVTGAGD-----GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG-GSR-LFSCG--- 192 (213)
Q Consensus 123 ~~v~~~~~~~~~~~l~~~~~d-----g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~-l~s~~--- 192 (213)
..+..+.|+|+|++|+.++.+ +.|++||+.+++........ ... +.|+| ++. +++.+
T Consensus 238 ~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~------------~~~-~~~s~~dg~~l~~~~~~~ 304 (396)
T 3c5m_A 238 ESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP------------PCS-HLMSNFDGSLMVGDGCDA 304 (396)
T ss_dssp EEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC------------SEE-EEEECSSSSEEEEEECCC
T ss_pred ccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC------------CCC-CCccCCCCceEEEecCCc
Confidence 136678999999987776543 34999999877654322221 123 78888 765 44433
Q ss_pred -------------cCCcEEEEeCCCCc
Q psy7433 193 -------------ADGSMKVRQLPDRD 206 (213)
Q Consensus 193 -------------~d~~i~iw~~~~~~ 206 (213)
.+..|++||+.+++
T Consensus 305 p~~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (396)
T 3c5m_A 305 PVDVADADSYNIENDPFLYVLNTKAKS 331 (396)
T ss_dssp ----------CCCCCCEEEEEETTTTB
T ss_pred ceeeccccccccCCCCcEEEEecccCc
Confidence 34789999997664
No 187
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.54 E-value=2.6e-11 Score=87.78 Aligned_cols=183 Identities=8% Similarity=0.088 Sum_probs=129.5
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee--eecCCceEEEEecCCCEEEEEcCCCcEE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV--CHDQGASSLVFAPQHQLLISAGKKGDIC 80 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 80 (213)
+..+...+.++++.++|+++++. ..++.|.+||.. .. ...+. .....+..++++++++++++...++.|.
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~---~~~~~v~~~d~~----~~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~ 81 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQ---HKANMISCINLD----GK-ITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIG 81 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEE---TTTTEEEEECTT----CC-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEE
T ss_pred CCCcCCCccceEECCCCCEEEEe---cCCCcEEEEcCC----CC-eEEecCCcccCceeeEEECCCCCEEEeCCCCCeEE
Confidence 34556789999999999988877 457899999973 22 22222 2346788999999999888877788999
Q ss_pred EEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCC
Q psy7433 81 VIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGD 143 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~d 143 (213)
.||.........+......+..+++.|++..+++...++.+. ..+..++++++++++++...+
T Consensus 82 ~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~ 161 (299)
T 2z2n_A 82 RITKKGIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDDGKIREYELPNKGSYPSFITLGSDNALWFTENQN 161 (299)
T ss_dssp EECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSCEEEEETTT
T ss_pred EECCCCcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECCCCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCC
Confidence 999863222222223455788999999998777765554442 347889999999888777777
Q ss_pred CcEEEEEccCCeeeee-ecCCCCceeEEEecCCCeEEEEeCCCCeEEEEe-cCCcEEEEeCCCC
Q psy7433 144 GDIKVWSLSGNHLLYN-FPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCG-ADGSMKVRQLPDR 205 (213)
Q Consensus 144 g~i~v~d~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~-~d~~i~iw~~~~~ 205 (213)
+.|..||. +++.... .... ...+..+++++++.+..+. .++.|.+|+. ++
T Consensus 162 ~~i~~~~~-~g~~~~~~~~~~----------~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g 213 (299)
T 2z2n_A 162 NAIGRITE-SGDITEFKIPTP----------ASGPVGITKGNDDALWFVEIIGNKIGRITT-SG 213 (299)
T ss_dssp TEEEEECT-TCCEEEEECSST----------TCCEEEEEECTTSSEEEEETTTTEEEEECT-TC
T ss_pred CEEEEEcC-CCcEEEeeCCCC----------CCcceeEEECCCCCEEEEccCCceEEEECC-CC
Confidence 89999998 5544332 2211 1468889999876655444 5778999998 44
No 188
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.53 E-value=6.7e-12 Score=91.22 Aligned_cols=179 Identities=11% Similarity=0.065 Sum_probs=120.6
Q ss_pred ccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeee----ecCCceEEEEecCCCEEEE----Ec-
Q psy7433 4 QCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVC----HDQGASSLVFAPQHQLLIS----AG- 74 (213)
Q Consensus 4 ~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~----~~- 74 (213)
..+...+.+++++|+|+++++. ..++.|.+||.. +++....... ....+..++++|+|+++++ +.
T Consensus 65 ~~~~~~~~~l~~~~dg~l~v~~---~~~~~i~~~d~~---~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~ 138 (296)
T 3e5z_A 65 MHPSHHQNGHCLNKQGHLIACS---HGLRRLERQREP---GGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGID 138 (296)
T ss_dssp ESSCSSEEEEEECTTCCEEEEE---TTTTEEEEECST---TCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHH
T ss_pred ECCCCCcceeeECCCCcEEEEe---cCCCeEEEEcCC---CCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccc
Confidence 3456778999999999988887 567899999973 3322222111 1235678999999998887 33
Q ss_pred ------------CCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-------e------------
Q psy7433 75 ------------KKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-------S------------ 123 (213)
Q Consensus 75 ------------~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-------~------------ 123 (213)
..+.|..++.. ++. ..+.........++|+|+++.+++.+.++.+. .
T Consensus 139 ~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~ 216 (296)
T 3e5z_A 139 KPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVE 216 (296)
T ss_dssp CGGGSSCCCCCSSSCEEEEECTT-SCE-EEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCS
T ss_pred cccccccccccCCCcEEEEECCC-CCE-EEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCC
Confidence 13456666654 433 33444556678999999999886666665554 0
Q ss_pred --ceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEe-CCCC-eEEEEecCCcEEE
Q psy7433 124 --PVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHV-DGGS-RLFSCGADGSMKV 199 (213)
Q Consensus 124 --~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~-~l~s~~~d~~i~i 199 (213)
.+..++++++|+++++. ++.|.+||.. ++.+..+..+. . +.+++| .|++ .|++++.+ .+.-
T Consensus 217 ~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~----------~-~~~~~f~~~d~~~L~v~t~~-~l~~ 281 (296)
T 3e5z_A 217 PGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTPQ----------T-TSNLCFGGPEGRTLYMTVST-EFWS 281 (296)
T ss_dssp SSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECSS----------C-CCEEEEESTTSCEEEEEETT-EEEE
T ss_pred CCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECCC----------C-ceeEEEECCCCCEEEEEcCC-eEEE
Confidence 12478899999866665 7889999986 66777776654 4 888888 4654 57776665 4555
Q ss_pred EeCCCC
Q psy7433 200 RQLPDR 205 (213)
Q Consensus 200 w~~~~~ 205 (213)
++..+.
T Consensus 282 ~~~~~~ 287 (296)
T 3e5z_A 282 IETNVR 287 (296)
T ss_dssp EECSCC
T ss_pred EEcccc
Confidence 555554
No 189
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.51 E-value=3.6e-12 Score=94.54 Aligned_cols=169 Identities=8% Similarity=0.088 Sum_probs=112.5
Q ss_pred eEEEEEeCCCCeEEEeecc------------------------CCCccEEEEeCCCcccccceeeeeeecCCceEEEEec
Q psy7433 10 TSDFVFLGSCSLVATAGHS------------------------SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP 65 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~------------------------s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 65 (213)
+..++|+|+|+.|+.+... .....|.+||+. .++.+..+.. . .+..+.|+|
T Consensus 106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~---~~~~~~~l~~-~-~~~~~~~sp 180 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTE---SEEVIEEFEK-P-RFSSGIWHR 180 (347)
T ss_dssp EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETT---TTEEEEEEEE-E-TTCEEEEET
T ss_pred ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECC---CCeEEeeecC-C-CcccccCCC
Confidence 8899999999998887310 003578999984 3333244444 3 789999999
Q ss_pred CCCEEEEEcCCC-------cEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCC--------cee--------
Q psy7433 66 QHQLLISAGKKG-------DICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDG--------DIK-------- 122 (213)
Q Consensus 66 ~~~~l~~~~~d~-------~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~--------~i~-------- 122 (213)
++ +++++..+. ...+|.+.+++.. .+..+ ..+..+ +|+++.++..+.+. .+.
T Consensus 181 dg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~ 255 (347)
T 2gop_A 181 DK-IVVNVPHREIIPQYFKFWDIYIWEDGKEE-KMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYDGKEVM 255 (347)
T ss_dssp TE-EEEEEECCCSSCCSSCCEEEEEEETTEEE-EEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEECSSCEE
T ss_pred Ce-EEEEEecccccccccccccEEEeCCCceE-EeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEECCCceE
Confidence 99 777775542 3455544455443 33323 444443 89999887766432 121
Q ss_pred -------eceEE-EEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecC
Q psy7433 123 -------SPVKC-LAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGAD 194 (213)
Q Consensus 123 -------~~v~~-~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d 194 (213)
..+.. +.|+ ++ ++++++.++.+++| +.+++..... .+. ..|.+++|+| ..+++++.+
T Consensus 256 ~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~-~~~----------~~v~~~~~s~-~~~~~~~~~ 320 (347)
T 2gop_A 256 GILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIA-KGR----------HWIMGFDVDE-IVVYLKETA 320 (347)
T ss_dssp ESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEE-CSS----------SEEEEEEESS-SEEEEEECS
T ss_pred eccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEe-cCC----------CeEEeeeeeC-cEEEEEcCC
Confidence 34565 8899 88 88999999999999 8755443333 222 5789999999 777777777
Q ss_pred CcE-EEEeCC
Q psy7433 195 GSM-KVRQLP 203 (213)
Q Consensus 195 ~~i-~iw~~~ 203 (213)
+.. .+|.+.
T Consensus 321 ~~~~~l~~~~ 330 (347)
T 2gop_A 321 TRLRELFTWD 330 (347)
T ss_dssp SSCCEEEEES
T ss_pred CChHHheEeC
Confidence 665 777765
No 190
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.50 E-value=9e-12 Score=92.05 Aligned_cols=180 Identities=10% Similarity=0.054 Sum_probs=124.7
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeec-----CCceEEEEecCCCEEEEEc--CCCcE
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHD-----QGASSLVFAPQHQLLISAG--KKGDI 79 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~--~d~~v 79 (213)
......++++++++.+++. ..++.|.+||. .+.+....+.... .....+++ . +..|+.+. .++.|
T Consensus 83 ~~~p~~i~~~~~g~lyv~~---~~~~~v~~iD~---~t~~~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v 154 (328)
T 3dsm_A 83 FTSPRYIHFLSDEKAYVTQ---IWDYRIFIINP---KTYEITGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRI 154 (328)
T ss_dssp CSSEEEEEEEETTEEEEEE---BSCSEEEEEET---TTTEEEEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEE
T ss_pred CCCCcEEEEeCCCeEEEEE---CCCCeEEEEEC---CCCeEEEEEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEE
Confidence 3567889999998665555 36899999998 4555555554322 14556777 3 44555544 48899
Q ss_pred EEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCC----------Ccee------------------eceEEEEEc
Q psy7433 80 CVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD----------GDIK------------------SPVKCLAID 131 (213)
Q Consensus 80 ~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~----------~~i~------------------~~v~~~~~~ 131 (213)
.++|+.+++....+.. ......+.++|++++++++..+ +.+. ..+..++|+
T Consensus 155 ~viD~~t~~~~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~ 233 (328)
T 3dsm_A 155 LKIDTETDKVVDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLN 233 (328)
T ss_dssp EEEETTTTEEEEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEEC
T ss_pred EEEECCCCeEEEEEEc-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEe
Confidence 9999999988877764 3445789999999877776654 4443 247889999
Q ss_pred cCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC-CCeEE-EE----ecCCcEEEEeCCCC
Q psy7433 132 PHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG-GSRLF-SC----GADGSMKVRQLPDR 205 (213)
Q Consensus 132 ~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~-s~----~~d~~i~iw~~~~~ 205 (213)
|+++++.++.. .|.+||..+++......... .+.....++++| ++.|+ +. ..++.|.+||.. +
T Consensus 234 ~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~--------~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g 302 (328)
T 3dsm_A 234 GTRDTLYWINN--DIWRMPVEADRVPVRPFLEF--------RDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-G 302 (328)
T ss_dssp TTSCEEEEESS--SEEEEETTCSSCCSSCSBCC--------CSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-C
T ss_pred cCCCEEEEEcc--EEEEEECCCCceeeeeeecC--------CCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-C
Confidence 99998887765 89999998776532111000 025688999998 56554 44 467899999987 5
Q ss_pred c
Q psy7433 206 D 206 (213)
Q Consensus 206 ~ 206 (213)
+
T Consensus 303 ~ 303 (328)
T 3dsm_A 303 K 303 (328)
T ss_dssp C
T ss_pred C
Confidence 3
No 191
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.50 E-value=1.1e-10 Score=84.44 Aligned_cols=182 Identities=9% Similarity=0.029 Sum_probs=124.8
Q ss_pred ccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEecc
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLR 85 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~ 85 (213)
....+.++++.|+++++++. ..++.|.+||.. .... ..........+..++++++++++++...++.|..||.
T Consensus 97 ~~~~~~~i~~~~~g~l~v~~---~~~~~i~~~d~~--g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~- 169 (299)
T 2z2n_A 97 PDSAPYGITEGPNGDIWFTE---MNGNRIGRITDD--GKIR-EYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE- 169 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEE---TTTTEEEEECTT--CCEE-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-
T ss_pred cCCCceeeEECCCCCEEEEe---cCCceEEEECCC--CCEE-EecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-
Confidence 34568899999999888877 567899999962 1111 1111223456889999999988887777789999998
Q ss_pred CceEEEe-cccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCCcEE
Q psy7433 86 QRVIRSR-FNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGDIK 147 (213)
Q Consensus 86 ~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg~i~ 147 (213)
+++.... .......+..++++++++.+++...++.+. ..+.+++++++|+++++...++.|.
T Consensus 170 ~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~ 249 (299)
T 2z2n_A 170 SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITTSGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIG 249 (299)
T ss_dssp TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEE
T ss_pred CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECCCCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEE
Confidence 6654432 333445688999999988766665444433 4578899999998777766788999
Q ss_pred EEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCC
Q psy7433 148 VWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 148 v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 205 (213)
.||. +++. ..+..... ...+.++++ +++.|..+...+.+..++..++
T Consensus 250 ~~d~-~g~~-~~~~~~~~--------~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~~~ 296 (299)
T 2z2n_A 250 RLTS-NNII-EEYPIQIK--------SAEPHGICF-DGETIWFAMECDKIGKLTLIKD 296 (299)
T ss_dssp EEET-TTEE-EEEECSSS--------SCCEEEEEE-CSSCEEEEETTTEEEEEEEC--
T ss_pred EECC-CCce-EEEeCCCC--------CCccceEEe-cCCCEEEEecCCcEEEEEcCcc
Confidence 9998 4432 23321110 146888999 8777766655777888887654
No 192
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.49 E-value=4.3e-11 Score=88.40 Aligned_cols=180 Identities=9% Similarity=0.058 Sum_probs=124.9
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCc
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR 87 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~ 87 (213)
.....+.+. +++++++. ..++.|.+||. .+.+.+..+. .......++++++++..++...++.|.+||..++
T Consensus 44 ~~~~~i~~~-~~~lyv~~---~~~~~v~viD~---~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~ 115 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVV---NNSHVIFAIDI---NTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTY 115 (328)
T ss_dssp SCEEEEEEE-TTEEEEEE---GGGTEEEEEET---TTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTT
T ss_pred ccceEEEEE-CCEEEEEE---cCCCEEEEEEC---cccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCC
Confidence 345677774 34455555 46789999998 5666666664 3466889999999854444447899999999999
Q ss_pred eEEEecccCC-----CCeeEEEecCCCCEEEEec-CCCcee----------------eceEEEEEccCCceEEEecCC--
Q psy7433 88 VIRSRFNAHE-----SPVKCLAIDPHEEFFVTGA-GDGDIK----------------SPVKCLAIDPHEEFFVTGAGD-- 143 (213)
Q Consensus 88 ~~~~~~~~~~-----~~i~~~~~~~~~~~l~~~~-~~~~i~----------------~~v~~~~~~~~~~~l~~~~~d-- 143 (213)
+....+.... .....+++ .+++.+++.. .++.+. ..+..+.++|+|+++++...+
T Consensus 116 ~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~ 194 (328)
T 3dsm_A 116 EITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYE 194 (328)
T ss_dssp EEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCT
T ss_pred eEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCcc
Confidence 8877665332 14567777 3344444433 355554 345778999999977777654
Q ss_pred --------CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC-CeEEEEecCCcEEEEeCCCCcc
Q psy7433 144 --------GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG-SRLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 144 --------g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d~~i~iw~~~~~~~ 207 (213)
+.|.++|..+++....+.... +.....++++|+ ++|+++.. .|.+||..+++.
T Consensus 195 ~~~~~~~~~~v~~id~~t~~v~~~~~~~~---------g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~ 256 (328)
T 3dsm_A 195 GSPYGYEAPSLYRIDAETFTVEKQFKFKL---------GDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRV 256 (328)
T ss_dssp TCSSCBCCCEEEEEETTTTEEEEEEECCT---------TCCCEEEEECTTSCEEEEESS--SEEEEETTCSSC
T ss_pred CCccccCCceEEEEECCCCeEEEEEecCC---------CCCceeEEEecCCCEEEEEcc--EEEEEECCCCce
Confidence 789999999888776665432 136889999985 45665544 899999987654
No 193
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.48 E-value=6.5e-12 Score=101.93 Aligned_cols=183 Identities=11% Similarity=0.051 Sum_probs=122.1
Q ss_pred eEEEEEeCCCCeEEEeeccCCCcc----------------EEEEeCCCcccc-cceeeeeeecCCceEEEEecCCCEEEE
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKN----------------VCLWDSLLPQKK-ALVQAFVCHDQGASSLVFAPQHQLLIS 72 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~----------------i~iwd~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~ 72 (213)
+..++|+|||+.|+.+ +.++. |++|++..+... ..+.....+...+..+.|+|+|++|+.
T Consensus 173 ~~~~~wspDg~~l~~~---~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~ 249 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYN---AYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLL 249 (710)
T ss_dssp SCCEEECTTSSEEEEE---ECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEE
T ss_pred cceEEEEeCCCEEEEE---EECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEE
Confidence 5679999999999988 44444 999998532211 111121223445778999999999887
Q ss_pred EcC-----CCcEEEEeccC------ce-EEEecccCCCCeeEEEecCCCCEEEEecCCC----cee--------------
Q psy7433 73 AGK-----KGDICVIDLRQ------RV-IRSRFNAHESPVKCLAIDPHEEFFVTGAGDG----DIK-------------- 122 (213)
Q Consensus 73 ~~~-----d~~v~iwd~~~------~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~----~i~-------------- 122 (213)
.+. +..|.+||+.+ +. ....+..+...+.. .|+|+++.|+..+..+ .+.
T Consensus 250 ~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~ 328 (710)
T 2xdw_A 250 SIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKV 328 (710)
T ss_dssp EEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEE
T ss_pred EEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccee
Confidence 654 56899999986 42 34445444444443 4778887766554432 121
Q ss_pred -------eceEEEEEccCCceEEEecCCCc--EEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEE-EE
Q psy7433 123 -------SPVKCLAIDPHEEFFVTGAGDGD--IKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLF-SC 191 (213)
Q Consensus 123 -------~~v~~~~~~~~~~~l~~~~~dg~--i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~-s~ 191 (213)
..+..+.|++++.++++...++. |.+||+.+++.+..+..+. ..+..+.++|++ .++ +.
T Consensus 329 l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~----------~~v~~~~~s~d~~~l~~~~ 398 (710)
T 2xdw_A 329 LVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEV----------GSVVGYSGQKKDTEIFYQF 398 (710)
T ss_dssp EECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCS----------SEEEEEECCTTCSEEEEEE
T ss_pred ccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCC----------ceEEEEecCCCCCEEEEEE
Confidence 14677889887888888888885 5666776777666666553 578889998865 433 32
Q ss_pred e---cCCcEEEEeCCCCc
Q psy7433 192 G---ADGSMKVRQLPDRD 206 (213)
Q Consensus 192 ~---~d~~i~iw~~~~~~ 206 (213)
+ ..+.+++||+.+++
T Consensus 399 ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 399 TSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp ECSSCCCEEEEEETTSSS
T ss_pred eCCCCCCEEEEEECCCCc
Confidence 2 45789999998765
No 194
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.45 E-value=6.3e-11 Score=93.48 Aligned_cols=185 Identities=14% Similarity=0.114 Sum_probs=127.1
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEe----cCCCEEEEEcC-CCcEEEE
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFA----PQHQLLISAGK-KGDICVI 82 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~~~-d~~v~iw 82 (213)
..+..+.|+|+|++++++ +.++.|.+||+.. .+.+.+..+.. ......++|+ |+|+++++++. ++.+.++
T Consensus 197 ~~p~~v~~SpDGr~lyv~---~~dg~V~viD~~~-~t~~~v~~i~~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~Vi 271 (567)
T 1qks_A 197 YAVHISRLSASGRYLFVI---GRDGKVNMIDLWM-KEPTTVAEIKI-GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIM 271 (567)
T ss_dssp SCEEEEEECTTSCEEEEE---ETTSEEEEEETTS-SSCCEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEE
T ss_pred CCccceEECCCCCEEEEE---cCCCeEEEEECCC-CCCcEeEEEec-CCCCceeEEccccCCCCCEEEEEEccCCeEEEE
Confidence 346689999999999988 5789999999831 14455566553 3346789999 69998887764 5899999
Q ss_pred eccCceEEEecccC-----------CCCeeEEEecCCCCEEEEe-cCCCcee------------------eceEEEEEcc
Q psy7433 83 DLRQRVIRSRFNAH-----------ESPVKCLAIDPHEEFFVTG-AGDGDIK------------------SPVKCLAIDP 132 (213)
Q Consensus 83 d~~~~~~~~~~~~~-----------~~~i~~~~~~~~~~~l~~~-~~~~~i~------------------~~v~~~~~~~ 132 (213)
|..+.+.+..+... ...+..+..++++..+++. ...+.+. .....+.|+|
T Consensus 272 D~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~p 351 (567)
T 1qks_A 272 DGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDG 351 (567)
T ss_dssp ETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECT
T ss_pred ECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECC
Confidence 99999888766521 1256778888876554443 3344442 2345788999
Q ss_pred CCceEEEec-CCCcEEEEEccCCeeeeeecC-CCCceeEEEecCCCeEEEEeCCC-CeE-EEEe-cCCcEEEEeCCC
Q psy7433 133 HEEFFVTGA-GDGDIKVWSLSGNHLLYNFPG-EHARSSFFKHIGQGVTQLHVDGG-SRL-FSCG-ADGSMKVRQLPD 204 (213)
Q Consensus 133 ~~~~l~~~~-~dg~i~v~d~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~-~~l-~s~~-~d~~i~iw~~~~ 204 (213)
++++++++. .++.|.++|+.+++.+..+.. ...+ +.+..+. + ++|+ +.+ ++.. .++.|.++|..+
T Consensus 352 dgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~P-----hpg~g~~-~-~~p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 352 SHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTP-----HPGRGAN-F-VHPTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp TSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSB-----CCTTCEE-E-EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred CCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCC-----CCcccee-e-ECCCCCcEEEeCCCCCCeEEEecCCC
Confidence 999876654 578999999999988777654 2211 0011222 2 4665 444 4443 468999999886
No 195
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.44 E-value=1.9e-11 Score=99.70 Aligned_cols=183 Identities=13% Similarity=0.068 Sum_probs=114.5
Q ss_pred ccCceEEEEEeCCCCeEEEeecc--CCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCc-----
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHS--SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGD----- 78 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~--s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~----- 78 (213)
|...+..++|+|||++||.+... +....|++||+. .++.+.. ..+...+..++|+|+ +.|+.++.++.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~---tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~ 235 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVA---DGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQA 235 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETT---TCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC-----
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECC---CCCCCCc-cCCCceeccEEEECC-CEEEEEEecCcccccc
Confidence 33468889999999999987310 111469999994 3433322 112223467899999 88888776554
Q ss_pred ---------EEEEeccCce----EEEecccCCCCeeEEEecCCCCEEEEecCCC-----cee------e--c-eEEE---
Q psy7433 79 ---------ICVIDLRQRV----IRSRFNAHESPVKCLAIDPHEEFFVTGAGDG-----DIK------S--P-VKCL--- 128 (213)
Q Consensus 79 ---------v~iwd~~~~~----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~-----~i~------~--~-v~~~--- 128 (213)
|++|++.++. .+.....+...+..+.|+|+|++++..+.++ .+. . . ...+
T Consensus 236 ~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~ 315 (741)
T 1yr2_A 236 FQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPD 315 (741)
T ss_dssp ---CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECS
T ss_pred cccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCC
Confidence 8899987664 2322223334588999999999888776543 222 1 1 2221
Q ss_pred ------EEccCCceEEEecC----CCcEEEEEccCC--eeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCc
Q psy7433 129 ------AIDPHEEFFVTGAG----DGDIKVWSLSGN--HLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGS 196 (213)
Q Consensus 129 ------~~~~~~~~l~~~~~----dg~i~v~d~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~ 196 (213)
.++|+|+.|+..+. ++.|.+||+.++ +....+..+. ..+..+.+..+..+++...|+.
T Consensus 316 ~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~----------~~l~~~~~~~~~lv~~~~~dg~ 385 (741)
T 1yr2_A 316 LKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESK----------DNLESVGIAGNRLFASYIHDAK 385 (741)
T ss_dssp SSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCS----------SEEEEEEEEBTEEEEEEEETTE
T ss_pred CCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCC----------CeEEEEEEECCEEEEEEEECCE
Confidence 23467777766654 345999998764 3333333222 3466777775556788888988
Q ss_pred EEEEeCC
Q psy7433 197 MKVRQLP 203 (213)
Q Consensus 197 i~iw~~~ 203 (213)
.+||.+.
T Consensus 386 ~~l~~~~ 392 (741)
T 1yr2_A 386 SQVLAFD 392 (741)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 7777554
No 196
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.43 E-value=2.3e-10 Score=85.93 Aligned_cols=182 Identities=10% Similarity=-0.002 Sum_probs=117.4
Q ss_pred EEEEeCCCCeEEEeecc-------CCCccEEEEeCCCcccccceeeeeee-------cCCceEEEEecCCCEEEEEcC--
Q psy7433 12 DFVFLGSCSLVATAGHS-------SESKNVCLWDSLLPQKKALVQAFVCH-------DQGASSLVFAPQHQLLISAGK-- 75 (213)
Q Consensus 12 ~~~~~~~~~~l~~~g~~-------s~~~~i~iwd~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~-- 75 (213)
.++++|||++++.+... ..++.|.+||. .+.+.+..+... ......++|+|+|++|+.++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~---~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~ 146 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDP---VTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAA 146 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEEC---CCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCC
Confidence 88999999999887210 03578999998 455555544321 123458899999999998874
Q ss_pred CCcEEEEeccCceEEEe-cccCCC-------CeeEEEecCCCCEEEE---------------------------------
Q psy7433 76 KGDICVIDLRQRVIRSR-FNAHES-------PVKCLAIDPHEEFFVT--------------------------------- 114 (213)
Q Consensus 76 d~~v~iwd~~~~~~~~~-~~~~~~-------~i~~~~~~~~~~~l~~--------------------------------- 114 (213)
++.|.++| .+++.+.. +..... .-.-+.++++++.++.
T Consensus 147 ~~~v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 225 (373)
T 2mad_H 147 GPAVGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSG 225 (373)
T ss_pred CCeEEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccCCcceeecceeEecCC
Confidence 47899999 99888777 542110 0001122222221111
Q ss_pred ----ecCCCcee-----------------------------eceEEEEEccCCceEEEecC----------CCcEEEEEc
Q psy7433 115 ----GAGDGDIK-----------------------------SPVKCLAIDPHEEFFVTGAG----------DGDIKVWSL 151 (213)
Q Consensus 115 ----~~~~~~i~-----------------------------~~v~~~~~~~~~~~l~~~~~----------dg~i~v~d~ 151 (213)
.+..+.+. .....+.++|+++.+.++.. .+.|.++|+
T Consensus 226 ~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~ 305 (373)
T 2mad_H 226 RIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTG 305 (373)
T ss_pred EEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEEC
Confidence 11111111 01122678888886666543 357999999
Q ss_pred cCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe--EEEEe-cCCcEEEEeCCCCccc
Q psy7433 152 SGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR--LFSCG-ADGSMKVRQLPDRDAV 208 (213)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~s~~-~d~~i~iw~~~~~~~~ 208 (213)
.+.+.+..+... ....+++|+|++. ++++. .++.|.++|..+.+..
T Consensus 306 ~t~~vv~~i~~g-----------~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv 354 (373)
T 2mad_H 306 LVGQTSSQISLG-----------HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQD 354 (373)
T ss_pred CCCEEEEEEECC-----------CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEE
Confidence 999998888653 4588999999754 66666 5899999999988654
No 197
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.41 E-value=1.4e-09 Score=78.60 Aligned_cols=177 Identities=6% Similarity=0.042 Sum_probs=124.5
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee--eecCCceEEEEecCCCEEEEEcCCCcEEEEec
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV--CHDQGASSLVFAPQHQLLISAGKKGDICVIDL 84 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~ 84 (213)
...+.++++.++++++++. ..++.|..+|.. .+. ..+. .....+..+++.++++++++...++.|..+|.
T Consensus 61 ~~~~~~i~~~~~g~l~v~~---~~~~~v~~~d~~----g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 132 (300)
T 2qc5_A 61 DAKVMCLIVSSLGDIWFTE---NGANKIGKLSKK----GGF-TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTA 132 (300)
T ss_dssp TCCEEEEEECTTSCEEEEE---TTTTEEEEECTT----SCE-EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred CCcceeEEECCCCCEEEEe---cCCCeEEEECCC----CCe-EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECC
Confidence 3578899999999988877 567889999973 222 2222 12356889999999988888777889999998
Q ss_pred cCceEEE-ecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCCcE
Q psy7433 85 RQRVIRS-RFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGDI 146 (213)
Q Consensus 85 ~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg~i 146 (213)
. ++... .+......+..+++.++++.+++...++.+. ..+..++++++++++++....+.|
T Consensus 133 ~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i 211 (300)
T 2qc5_A 133 D-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITNTGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKI 211 (300)
T ss_dssp T-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEE
T ss_pred C-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECCCCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEE
Confidence 7 54432 2333456788999999998666655454443 347789999999877777777889
Q ss_pred EEEEccCCeeeee-ecCCCCceeEEEecCCCeEEEEeCCCCeEEEEe-cCCcEEEEeCC
Q psy7433 147 KVWSLSGNHLLYN-FPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCG-ADGSMKVRQLP 203 (213)
Q Consensus 147 ~v~d~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~-~d~~i~iw~~~ 203 (213)
.+||. +++.... +... ...+.++++++++.|..+. .++.|..|+..
T Consensus 212 ~~~~~-~g~~~~~~~~~~----------~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 212 GRITT-TGEISEYDIPTP----------NARPHAITAGKNSEIWFTEWGANQIGRITND 259 (300)
T ss_dssp EEECT-TCCEEEEECSST----------TCCEEEEEECSTTCEEEEETTTTEEEEECTT
T ss_pred EEEcC-CCcEEEEECCCC----------CCCceEEEECCCCCEEEeccCCCeEEEECCC
Confidence 99998 4433222 2211 1568899999877655554 46889999873
No 198
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.40 E-value=1.8e-09 Score=78.06 Aligned_cols=180 Identities=8% Similarity=0.052 Sum_probs=125.6
Q ss_pred ccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccccccee-eeeeecCCceEEEEecCCCEEEEEcCCCcEEEEec
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQ-AFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL 84 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~ 84 (213)
....+.++.+.++|+++++. ..++.|.+||.. .+... .+......+..++++++++++++...++.|..||.
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~---~~~~~v~~~~~~----~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~ 90 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQ---HKANKISSLDQS----GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSK 90 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEE---TTTTEEEEECTT----SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred CCCCcceeeECCCCCEEEEc---CCCCeEEEECCC----CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECC
Confidence 45678999999999988877 568899999973 22221 11222356889999999988887777889999998
Q ss_pred cCceEE-EecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCCcE
Q psy7433 85 RQRVIR-SRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGDI 146 (213)
Q Consensus 85 ~~~~~~-~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg~i 146 (213)
. ++.. .........+..+++.++++.+++...++.+. ..+..++++++++++++...++.|
T Consensus 91 ~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i 169 (300)
T 2qc5_A 91 K-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTADGTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSI 169 (300)
T ss_dssp T-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEE
T ss_pred C-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCCCCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeE
Confidence 7 5433 22232346788999999998777765554442 457888999999977777667889
Q ss_pred EEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEe-cCCcEEEEeCC
Q psy7433 147 KVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCG-ADGSMKVRQLP 203 (213)
Q Consensus 147 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~-~d~~i~iw~~~ 203 (213)
..+|. +++... +..... ...+..+++++++.|..+. ..+.|.+|+..
T Consensus 170 ~~~~~-~g~~~~-~~~~~~--------~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~ 217 (300)
T 2qc5_A 170 GRITN-TGKLEE-YPLPTN--------AAAPVGITSGNDGALWFVEIMGNKIGRITTT 217 (300)
T ss_dssp EEECT-TCCEEE-EECSST--------TCCEEEEEECTTSSEEEEETTTTEEEEECTT
T ss_pred EEECC-CCcEEE-eeCCCC--------CCCcceEEECCCCCEEEEccCCCEEEEEcCC
Confidence 99998 444332 222111 1468899999877655554 45679999873
No 199
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.39 E-value=1.7e-10 Score=91.06 Aligned_cols=172 Identities=13% Similarity=0.151 Sum_probs=122.7
Q ss_pred CCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEecc--CceEEEecc
Q psy7433 17 GSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLR--QRVIRSRFN 94 (213)
Q Consensus 17 ~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~--~~~~~~~~~ 94 (213)
|.+.++++. ..++.|.++|. .+.+.+..+.. ...+..+.|+|+++++++++.++.|.+||+. +++.+..+.
T Consensus 165 ~~~~~~V~~---~~~~~V~viD~---~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~ 237 (567)
T 1qks_A 165 LENLFSVTL---RDAGQIALIDG---STYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIK 237 (567)
T ss_dssp GGGEEEEEE---TTTTEEEEEET---TTCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEE
T ss_pred CCceEEEEe---CCCCeEEEEEC---CCCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEe
Confidence 444455665 68999999998 56667766653 3456789999999999999999999999996 777777776
Q ss_pred cCCCCeeEEEec----CCCCEEEEecCC-Ccee----------------e------------ceEEEEEccCCc-eEEEe
Q psy7433 95 AHESPVKCLAID----PHEEFFVTGAGD-GDIK----------------S------------PVKCLAIDPHEE-FFVTG 140 (213)
Q Consensus 95 ~~~~~i~~~~~~----~~~~~l~~~~~~-~~i~----------------~------------~v~~~~~~~~~~-~l~~~ 140 (213)
. ......++++ |++++++++... +.+. . .+..+..++++. +++..
T Consensus 238 ~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~ 316 (567)
T 1qks_A 238 I-GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV 316 (567)
T ss_dssp C-CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE
T ss_pred c-CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEe
Confidence 4 3446799999 699988887654 3332 0 345566677655 45555
Q ss_pred cCCCcEEEEEccCCee--eeeecCCCCceeEEEecCCCeEEEEeCCCCe-E-EEEecCCcEEEEeCCCCcc
Q psy7433 141 AGDGDIKVWSLSGNHL--LYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-L-FSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 141 ~~dg~i~v~d~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l-~s~~~d~~i~iw~~~~~~~ 207 (213)
..+|.|.++|....+. +..+.. +.....+.|+|+++ + ++...++.|.++|+.+++.
T Consensus 317 ~~~g~v~~vd~~~~~~~~v~~i~~-----------~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl 376 (567)
T 1qks_A 317 KETGKILLVDYTDLNNLKTTEISA-----------ERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKL 376 (567)
T ss_dssp TTTTEEEEEETTCSSEEEEEEEEC-----------CSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEE
T ss_pred cCCCeEEEEecCCCccceeeeeec-----------cccccCceECCCCCEEEEEeCCCCeEEEEECCCCcE
Confidence 6678999999865432 222222 14577889999764 4 4455688999999998753
No 200
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.39 E-value=7.6e-10 Score=80.75 Aligned_cols=182 Identities=10% Similarity=0.085 Sum_probs=119.9
Q ss_pred cCceEEEEEeCCCCeEEE-------eeccCCCccEEEEeCCCcccccceeeeee-----ecCCceEEEEecC-CCEEEEE
Q psy7433 7 NKITSDFVFLGSCSLVAT-------AGHSSESKNVCLWDSLLPQKKALVQAFVC-----HDQGASSLVFAPQ-HQLLISA 73 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~-------~g~~s~~~~i~iwd~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~-~~~l~~~ 73 (213)
-....+++|+++++++++ . ..++.|.+||.. .++. ..+.. +...+..++++++ ++++++.
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~---~~~~~i~~~d~~---~g~~-~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~ 89 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNG---KPAGEILRIDLK---TGKK-TVICKPEVNGYGGIPAGCQCDRDANQLFVAD 89 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETT---EECCEEEEECTT---TCCE-EEEECCEETTEECCEEEEEECSSSSEEEEEE
T ss_pred CCCccCceECCCCCEEEEEeccccCC---CCCCEEEEEeCC---CCcE-EEEEecccCCCCCCCceEEEecCCCcEEEEE
Confidence 345678999999998888 4 367899999973 2222 22222 4467899999999 7655555
Q ss_pred cCCCcEEEEeccCceEEEe-ccc----CCCCeeEEEecCCCCEEEEecCC---------------Ccee-----------
Q psy7433 74 GKKGDICVIDLRQRVIRSR-FNA----HESPVKCLAIDPHEEFFVTGAGD---------------GDIK----------- 122 (213)
Q Consensus 74 ~~d~~v~iwd~~~~~~~~~-~~~----~~~~i~~~~~~~~~~~l~~~~~~---------------~~i~----------- 122 (213)
. ...|.+||.. ++.... ... ....+..++++|+++.+++...+ +.+.
T Consensus 90 ~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~ 167 (314)
T 1pjx_A 90 M-RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQV 167 (314)
T ss_dssp T-TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEE
T ss_pred C-CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCCCCEEEe
Confidence 4 4478899988 665433 221 12347899999999877776543 2222
Q ss_pred ----eceEEEEEc----cCCceEE-EecCCCcEEEEEcc-CCee-----eeeecCCCCceeEEEecCCCeEEEEeCCCCe
Q psy7433 123 ----SPVKCLAID----PHEEFFV-TGAGDGDIKVWSLS-GNHL-----LYNFPGEHARSSFFKHIGQGVTQLHVDGGSR 187 (213)
Q Consensus 123 ----~~v~~~~~~----~~~~~l~-~~~~dg~i~v~d~~-~~~~-----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 187 (213)
.....++|+ |+++.+. +...++.|.+||+. +++. ...+..+. ...+..+++++++.
T Consensus 168 ~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~---------~~~p~~i~~d~~G~ 238 (314)
T 1pjx_A 168 DTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTH---------EGGADGMDFDEDNN 238 (314)
T ss_dssp EEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCS---------SCEEEEEEEBTTCC
T ss_pred ccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCC---------CCCCCceEECCCCC
Confidence 245788999 9997554 44567899999986 4432 12222110 03467899998776
Q ss_pred E-EEEecCCcEEEEeCCCCc
Q psy7433 188 L-FSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 188 l-~s~~~d~~i~iw~~~~~~ 206 (213)
+ ++...++.|.+||..+++
T Consensus 239 l~v~~~~~~~i~~~d~~~g~ 258 (314)
T 1pjx_A 239 LLVANWGSSHIEVFGPDGGQ 258 (314)
T ss_dssp EEEEEETTTEEEEECTTCBS
T ss_pred EEEEEcCCCEEEEEcCCCCc
Confidence 5 444567899999987553
No 201
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.37 E-value=1.6e-09 Score=78.80 Aligned_cols=181 Identities=15% Similarity=0.256 Sum_probs=118.0
Q ss_pred cCceEEEEEeCCCC-eEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEecc
Q psy7433 7 NKITSDFVFLGSCS-LVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLR 85 (213)
Q Consensus 7 ~~~v~~~~~~~~~~-~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~ 85 (213)
..-.-+..|+|++. ++++. ..++.|..||.. .... ..+ .....+.+++++++++++++. ++.|.+||..
T Consensus 12 ~~~~Egp~w~~~~~~l~~~d---~~~~~i~~~d~~---~~~~-~~~-~~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~ 81 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSLLFVD---IPAKKVCRWDSF---TKQV-QRV-TMDAPVSSVALRQSGGYVATI--GTKFCALNWK 81 (297)
T ss_dssp CSBEEEEEEETTTTEEEEEE---TTTTEEEEEETT---TCCE-EEE-ECSSCEEEEEEBTTSSEEEEE--TTEEEEEETT
T ss_pred CccccCCeEECCCCEEEEEE---CCCCEEEEEECC---CCcE-EEE-eCCCceEEEEECCCCCEEEEE--CCeEEEEECC
Confidence 34456788999655 55554 578999999973 2222 222 245678999999999955554 5689999998
Q ss_pred CceEEEeccc----CCCCeeEEEecCCCCEEEEecCC-----------Ccee---------------eceEEEEEccCCc
Q psy7433 86 QRVIRSRFNA----HESPVKCLAIDPHEEFFVTGAGD-----------GDIK---------------SPVKCLAIDPHEE 135 (213)
Q Consensus 86 ~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~~-----------~~i~---------------~~v~~~~~~~~~~ 135 (213)
+++....... ....+..++++|+++++++.... +.+. .....++|+|+++
T Consensus 82 ~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~ 161 (297)
T 3g4e_A 82 EQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHK 161 (297)
T ss_dssp TTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSC
T ss_pred CCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCC
Confidence 8765432221 12347889999999966654221 2222 3467899999998
Q ss_pred eE-EEecCCCcEEEEEc--cCCee-----eeeecCCCCceeEEEecCCCeEEEEeCCCCeEEE-EecCCcEEEEeCCCCc
Q psy7433 136 FF-VTGAGDGDIKVWSL--SGNHL-----LYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFS-CGADGSMKVRQLPDRD 206 (213)
Q Consensus 136 ~l-~~~~~dg~i~v~d~--~~~~~-----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s-~~~d~~i~iw~~~~~~ 206 (213)
.| ++.+.++.|.+||+ .++.. ...+... ...+..+++++++.|.. ...++.|..||..+++
T Consensus 162 ~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~----------~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~ 231 (297)
T 3g4e_A 162 IFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKE----------EQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGK 231 (297)
T ss_dssp EEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGG----------GCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCC
T ss_pred EEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCC----------CCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCce
Confidence 65 55566789999997 34432 1111111 14578899998776544 4456789999988664
Q ss_pred c
Q psy7433 207 A 207 (213)
Q Consensus 207 ~ 207 (213)
.
T Consensus 232 ~ 232 (297)
T 3g4e_A 232 R 232 (297)
T ss_dssp E
T ss_pred E
Confidence 3
No 202
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.37 E-value=5e-10 Score=81.75 Aligned_cols=180 Identities=11% Similarity=0.095 Sum_probs=120.9
Q ss_pred ccCceEEEEEeCC-CCeEEEeeccCCCccEEEEeCCCcccccceee-ee----eecCCceEEEEecCCCEEEEEcCC---
Q psy7433 6 HNKITSDFVFLGS-CSLVATAGHSSESKNVCLWDSLLPQKKALVQA-FV----CHDQGASSLVFAPQHQLLISAGKK--- 76 (213)
Q Consensus 6 h~~~v~~~~~~~~-~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~-~~----~~~~~v~~~~~~~~~~~l~~~~~d--- 76 (213)
+...+.+++++++ ++++++. ....|.+||.+ ++.... .. .....+..++++++++++++...+
T Consensus 69 ~~~~~~~i~~~~~~g~l~v~~----~~~~l~~~d~~----g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~ 140 (314)
T 1pjx_A 69 YGGIPAGCQCDRDANQLFVAD----MRLGLLVVQTD----GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVA 140 (314)
T ss_dssp EECCEEEEEECSSSSEEEEEE----TTTEEEEEETT----SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCT
T ss_pred CCCCCceEEEecCCCcEEEEE----CCCCEEEEeCC----CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccc
Confidence 5567899999999 8767665 34478899973 222111 11 112357899999999888777654
Q ss_pred ------------CcEEEEeccCceEEEecccCCCCeeEEEec----CCCCEEEEe-cCCCcee-----------------
Q psy7433 77 ------------GDICVIDLRQRVIRSRFNAHESPVKCLAID----PHEEFFVTG-AGDGDIK----------------- 122 (213)
Q Consensus 77 ------------~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~----~~~~~l~~~-~~~~~i~----------------- 122 (213)
+.|..||.. ++..... ........++++ |+++.++++ ..++.+.
T Consensus 141 ~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~ 218 (314)
T 1pjx_A 141 PADYTRSMQEKFGSIYCFTTD-GQMIQVD-TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWG 218 (314)
T ss_dssp TSCCCBTTSSSCEEEEEECTT-SCEEEEE-EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEE
T ss_pred cccccccccCCCCeEEEECCC-CCEEEec-cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEE
Confidence 567777765 5433222 233446788999 988655444 3334332
Q ss_pred -------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEE-ec
Q psy7433 123 -------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSC-GA 193 (213)
Q Consensus 123 -------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~-~~ 193 (213)
..+..++++++|+++++...++.|.+||.++++.+..+..+. ..+.+++++|++. |+.+ ..
T Consensus 219 ~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~----------~~~~~i~~~~dg~~l~v~~~~ 288 (314)
T 1pjx_A 219 HIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPF----------EKPSNLHFKPQTKTIFVTEHE 288 (314)
T ss_dssp ECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSS----------SCEEEEEECTTSSEEEEEETT
T ss_pred ECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCC----------CCceeEEECCCCCEEEEEeCC
Confidence 125678889999988887778899999988666655555442 5689999988764 5444 45
Q ss_pred CCcEEEEeCCCC
Q psy7433 194 DGSMKVRQLPDR 205 (213)
Q Consensus 194 d~~i~iw~~~~~ 205 (213)
++.|..|++...
T Consensus 289 ~~~l~~~~~~~~ 300 (314)
T 1pjx_A 289 NNAVWKFEWQRN 300 (314)
T ss_dssp TTEEEEEECSSC
T ss_pred CCeEEEEeCCCC
Confidence 679999998754
No 203
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.37 E-value=6.2e-10 Score=84.65 Aligned_cols=189 Identities=13% Similarity=0.130 Sum_probs=121.9
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCC--cEEEEecc
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKG--DICVIDLR 85 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~v~iwd~~ 85 (213)
.....++|+|+++++++. ..++.|++||.. ......... ...... ++|+++++.|+++..++ .|.+++..
T Consensus 131 ~~P~~la~d~~g~lyv~d---~~~~~I~~id~~---~g~~~~~~~-~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~ 202 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQ---RDDPRVRLISVD---DNKVTTVHP-GFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKA 202 (409)
T ss_dssp CCEEEEEECSTTEEEEEE---TTTTEEEEEETT---TTEEEEEEE-TCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGG
T ss_pred CCceEEEEeCCCCEEEEe---cCCCcEEEEECC---CCEEEEeec-cCCCCc-eeEecCCCcEEEEecCCCceEEEEEcC
Confidence 468899999999988877 577999999973 333332222 223334 99999999999888766 78888887
Q ss_pred CceEEEec---cc-CCCCeeEEEecCCCCEEEEecCCCcee---------e-------------ceE-EEEEccC-CceE
Q psy7433 86 QRVIRSRF---NA-HESPVKCLAIDPHEEFFVTGAGDGDIK---------S-------------PVK-CLAIDPH-EEFF 137 (213)
Q Consensus 86 ~~~~~~~~---~~-~~~~i~~~~~~~~~~~l~~~~~~~~i~---------~-------------~v~-~~~~~~~-~~~l 137 (213)
.+.....+ .. ....+.+++++|++..|+++..++.+. . ... .++|+|+ +.++
T Consensus 203 ~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~ly 282 (409)
T 3hrp_A 203 SGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFY 282 (409)
T ss_dssp GTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEE
T ss_pred CCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEE
Confidence 65433333 12 445678999999555555566666554 0 013 8999995 6666
Q ss_pred EEecCCCcEEEEEccCCeeeeeecCCC-Cce-eE---EEecCCCeEEEEeCCCCeE-EEEe-cCCcEEEEeCCCCc
Q psy7433 138 VTGAGDGDIKVWSLSGNHLLYNFPGEH-ARS-SF---FKHIGQGVTQLHVDGGSRL-FSCG-ADGSMKVRQLPDRD 206 (213)
Q Consensus 138 ~~~~~dg~i~v~d~~~~~~~~~~~~~~-~~~-~~---~~~~~~~v~~~~~~~~~~l-~s~~-~d~~i~iw~~~~~~ 206 (213)
++-..++.|+.|+.... ...+.+.. ... .. ....-.....+++++++.| ++-. .++.|+.|++.++.
T Consensus 283 v~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~ 356 (409)
T 3hrp_A 283 MSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY 356 (409)
T ss_dssp EEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE
T ss_pred EEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE
Confidence 67777889999987543 22222211 000 00 0000135789999997654 4555 67899999976653
No 204
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.36 E-value=1.3e-10 Score=87.03 Aligned_cols=137 Identities=15% Similarity=0.125 Sum_probs=86.5
Q ss_pred EEEEeCCCCeEEEeec-------cCCCccEEEEeCCCcccccceeeeeeec-------CCceEEEEecCCCEEEEEcC--
Q psy7433 12 DFVFLGSCSLVATAGH-------SSESKNVCLWDSLLPQKKALVQAFVCHD-------QGASSLVFAPQHQLLISAGK-- 75 (213)
Q Consensus 12 ~~~~~~~~~~l~~~g~-------~s~~~~i~iwd~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~~-- 75 (213)
.++++|+|++++.+.. +..++.|.+||. .+.+.+..+.... .....++|+|+|++++.+..
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~---~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~ 158 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDP---VTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSP 158 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT---TTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSS
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEEC---CCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCC
Confidence 3999999998877620 003578999998 5666666664321 24667999999999988764
Q ss_pred CCcEEEEeccCceEEEecccCCC-------CeeEEEecCCCCEEEEecCC-Ccee-----------ece-EEEEEc-cCC
Q psy7433 76 KGDICVIDLRQRVIRSRFNAHES-------PVKCLAIDPHEEFFVTGAGD-GDIK-----------SPV-KCLAID-PHE 134 (213)
Q Consensus 76 d~~v~iwd~~~~~~~~~~~~~~~-------~i~~~~~~~~~~~l~~~~~~-~~i~-----------~~v-~~~~~~-~~~ 134 (213)
++.|.++|+.+++.+..+..... .-.-++.+++|+++.+.... +.+. .++ ....|. ++|
T Consensus 159 ~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG 238 (386)
T 3sjl_D 159 APAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAG 238 (386)
T ss_dssp SCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTT
T ss_pred CCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCC
Confidence 68999999999988877753211 00113666777766666544 4441 111 112443 455
Q ss_pred ceEEEecCCCcEEEEEcc
Q psy7433 135 EFFVTGAGDGDIKVWSLS 152 (213)
Q Consensus 135 ~~l~~~~~dg~i~v~d~~ 152 (213)
++++ .+.+|.+++.|+.
T Consensus 239 ~~~~-vs~~g~V~v~d~~ 255 (386)
T 3sjl_D 239 RLVW-PTYTGKIHQIDLS 255 (386)
T ss_dssp EEEE-EBTTSEEEEEECT
T ss_pred cEEE-EeCCCEEEEEECC
Confidence 4433 4446777777764
No 205
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.34 E-value=1.1e-10 Score=88.66 Aligned_cols=183 Identities=10% Similarity=0.077 Sum_probs=121.2
Q ss_pred EEEEeCCCCeEEEeecc-------CCCccEEEEeCCCcccccceeeeeee-------cCCceEEEEecCCCEEEEEcC--
Q psy7433 12 DFVFLGSCSLVATAGHS-------SESKNVCLWDSLLPQKKALVQAFVCH-------DQGASSLVFAPQHQLLISAGK-- 75 (213)
Q Consensus 12 ~~~~~~~~~~l~~~g~~-------s~~~~i~iwd~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~-- 75 (213)
.+.++||++.++.+... ..++.|.++|. .+.+.+..+... ......++|+|+|++++.+..
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~---~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~ 198 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDP---VTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSP 198 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT---TTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSS
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEEC---CCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCC
Confidence 79999999988887200 03678999998 566666665432 234567899999999998864
Q ss_pred CCcEEEEeccCceEEEecccCCC-------CeeEEEecCCCCEEEEecCC------------------------------
Q psy7433 76 KGDICVIDLRQRVIRSRFNAHES-------PVKCLAIDPHEEFFVTGAGD------------------------------ 118 (213)
Q Consensus 76 d~~v~iwd~~~~~~~~~~~~~~~-------~i~~~~~~~~~~~l~~~~~~------------------------------ 118 (213)
++.|.+.|+.+++.+..+..... .-.-+.++++++.+++...+
T Consensus 199 ~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~ 278 (426)
T 3c75_H 199 APAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGR 278 (426)
T ss_dssp SCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCE
T ss_pred CCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCE
Confidence 57899999999988776653110 01123445555544333322
Q ss_pred -------Ccee-----------------------------eceEEEEEccCCceEEEecC----------CCcEEEEEcc
Q psy7433 119 -------GDIK-----------------------------SPVKCLAIDPHEEFFVTGAG----------DGDIKVWSLS 152 (213)
Q Consensus 119 -------~~i~-----------------------------~~v~~~~~~~~~~~l~~~~~----------dg~i~v~d~~ 152 (213)
+.+. .....++++|+++.+++... .+.|.++|+.
T Consensus 279 ~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~ 358 (426)
T 3c75_H 279 LVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAE 358 (426)
T ss_dssp EEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETT
T ss_pred EEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECC
Confidence 2111 00111677887775555432 3468888888
Q ss_pred CCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC--eEEEEe-cCCcEEEEeCCCCccc
Q psy7433 153 GNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS--RLFSCG-ADGSMKVRQLPDRDAV 208 (213)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~-~d~~i~iw~~~~~~~~ 208 (213)
+.+.+..+... .....+.++|++ ++++.. .++.|.++|..+.+.+
T Consensus 359 T~kvv~~I~vg-----------~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv 406 (426)
T 3c75_H 359 TGERINKIELG-----------HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEEL 406 (426)
T ss_dssp TCCEEEEEEEE-----------EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEE
T ss_pred CCeEEEEEECC-----------CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEE
Confidence 88888877653 358889999965 466666 5899999999988654
No 206
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.32 E-value=7.1e-10 Score=80.68 Aligned_cols=159 Identities=10% Similarity=0.059 Sum_probs=105.4
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeee-----cCCceEEEEecCCCEEEEEcC------
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCH-----DQGASSLVFAPQHQLLISAGK------ 75 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~------ 75 (213)
...+.+++++|+|+++++. +..|.+||.+ +.+. ..+... ...++.++++|+|+++++...
T Consensus 53 ~~~~~~i~~~~dG~l~v~~-----~~~l~~~d~~---~g~~-~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~ 123 (297)
T 3g4e_A 53 DAPVSSVALRQSGGYVATI-----GTKFCALNWK---EQSA-VVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPA 123 (297)
T ss_dssp SSCEEEEEEBTTSSEEEEE-----TTEEEEEETT---TTEE-EEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTT
T ss_pred CCceEEEEECCCCCEEEEE-----CCeEEEEECC---CCcE-EEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccc
Confidence 4678999999999966654 5679999974 2222 122111 234788999999996665422
Q ss_pred ---CCcEEEEeccC-ceEEEecccCCCCeeEEEecCCCCEEEEe-cCCCcee------------------------eceE
Q psy7433 76 ---KGDICVIDLRQ-RVIRSRFNAHESPVKCLAIDPHEEFFVTG-AGDGDIK------------------------SPVK 126 (213)
Q Consensus 76 ---d~~v~iwd~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~~~~i~------------------------~~v~ 126 (213)
...-.+|.+.. ++... +.........++|+|+++.++.+ +.++.+. ..+.
T Consensus 124 ~~~~~~~~l~~~d~~g~~~~-~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~ 202 (297)
T 3g4e_A 124 VLERHQGALYSLFPDHHVKK-YFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPD 202 (297)
T ss_dssp BCCTTCEEEEEECTTSCEEE-EEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEE
T ss_pred cccCCCcEEEEEECCCCEEE-EeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCC
Confidence 12334555442 33222 22233456789999999866443 3333332 2357
Q ss_pred EEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeC-CC
Q psy7433 127 CLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVD-GG 185 (213)
Q Consensus 127 ~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~ 185 (213)
.++++++|++.++....+.|..||..+++.+..+..+. ..+++++|. |+
T Consensus 203 g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~----------~~~t~~~f~g~d 252 (297)
T 3g4e_A 203 GMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPV----------DKTTSCCFGGKN 252 (297)
T ss_dssp EEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSS----------SBEEEEEEESGG
T ss_pred eeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCC----------CCceEEEEeCCC
Confidence 78999999877777777889999998888888887654 568999997 54
No 207
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.31 E-value=6.3e-11 Score=95.98 Aligned_cols=181 Identities=7% Similarity=-0.048 Sum_probs=113.9
Q ss_pred EEEEEeCCCCeEEEeeccCCCcc-------------EEEEeCCCcccc-cceeeeeeecCCceEEEEecCCCEEEEEcCC
Q psy7433 11 SDFVFLGSCSLVATAGHSSESKN-------------VCLWDSLLPQKK-ALVQAFVCHDQGASSLVFAPQHQLLISAGKK 76 (213)
Q Consensus 11 ~~~~~~~~~~~l~~~g~~s~~~~-------------i~iwd~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 76 (213)
..++|+|||+.|+.+ +.+.. |++|++..+... ..+.....+...+..+.|+|+|++|+..+.+
T Consensus 171 ~~~~wspDg~~l~~~---~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~ 247 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYE---WLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILR 247 (695)
T ss_dssp CCCEECTTSSEEEEE---ECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEE
T ss_pred cceEEecCCCEEEEE---EecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeC
Confidence 678999999999988 45554 999998533221 2232333344578899999999998887765
Q ss_pred C----cEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecC---CCcee---------------------eceEEE
Q psy7433 77 G----DICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAG---DGDIK---------------------SPVKCL 128 (213)
Q Consensus 77 ~----~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---~~~i~---------------------~~v~~~ 128 (213)
+ .|.+|+..+++.. .+..+........+ +++..++.... ++.+. ..+..+
T Consensus 248 ~~~~~~l~~~~~~~~~~~-~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~ 325 (695)
T 2bkl_A 248 GWSENDVYWKRPGEKDFR-LLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSV 325 (695)
T ss_dssp TTTEEEEEEECTTCSSCE-EEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEE
T ss_pred CCCceEEEEEcCCCCceE-EeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEE
Confidence 5 6777776555433 33334444455555 45553333321 22222 235667
Q ss_pred EEccCCceEEEecCCCcEEEEEcc-CCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEE-EE---ecCCcEEEEeC
Q psy7433 129 AIDPHEEFFVTGAGDGDIKVWSLS-GNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLF-SC---GADGSMKVRQL 202 (213)
Q Consensus 129 ~~~~~~~~l~~~~~dg~i~v~d~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~-s~---~~d~~i~iw~~ 202 (213)
+|+ ++.++++...|+..++|.+. .++....+..+.. ..+..+.++|++ .++ +. ...+.|++||+
T Consensus 326 ~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~---------~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~ 395 (695)
T 2bkl_A 326 SIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGV---------GAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSV 395 (695)
T ss_dssp EEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSS---------SEECCCBSCTTCSEEEEEEEETTEEEEEEEEET
T ss_pred EEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCC---------eEEEEeecCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence 777 66788888899988888665 3444555544321 457777888754 443 22 24578999999
Q ss_pred CCCc
Q psy7433 203 PDRD 206 (213)
Q Consensus 203 ~~~~ 206 (213)
.+++
T Consensus 396 ~~g~ 399 (695)
T 2bkl_A 396 STGK 399 (695)
T ss_dssp TTCC
T ss_pred CCCc
Confidence 8764
No 208
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.30 E-value=2.9e-09 Score=79.04 Aligned_cols=178 Identities=12% Similarity=0.155 Sum_probs=119.3
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCC-----CccEEEEeCCCcccccceeeeeee------cCCceEEEEecCCCEE-EE
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSE-----SKNVCLWDSLLPQKKALVQAFVCH------DQGASSLVFAPQHQLL-IS 72 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~-----~~~i~iwd~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l-~~ 72 (213)
+|...+..++++++++++++- .. +..|.+||+ .+.+.++.+... ...+..+++++++..+ ++
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D---~g~~~~~~~~i~~~d~---~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvt 137 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLD---NGNQSKSVPKLVAWDT---LNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYIS 137 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEE---CHHHHTSCCEEEEEET---TTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEE
T ss_pred cceeEeeEEEEcCCCcEEEEc---CCCCcCCCCeEEEEEC---CCCeEEEEEECChhhcccccccceEEEecCCCEEEEE
Confidence 355789999999999877764 22 478999998 344444444322 2346899999865444 44
Q ss_pred Ec---CCCcEEEEeccCceEEEecccCC-----------------------------CCeeEEEecCCCCEEEEecCCC-
Q psy7433 73 AG---KKGDICVIDLRQRVIRSRFNAHE-----------------------------SPVKCLAIDPHEEFFVTGAGDG- 119 (213)
Q Consensus 73 ~~---~d~~v~iwd~~~~~~~~~~~~~~-----------------------------~~i~~~~~~~~~~~l~~~~~~~- 119 (213)
-. .++.|.+||+.+++..+.+..|. ..+..++++|+++.|+++...+
T Consensus 138 d~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~ 217 (343)
T 2qe8_A 138 DPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHST 217 (343)
T ss_dssp ECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCS
T ss_pred cCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCC
Confidence 44 57899999998877655443210 2357899999999888776554
Q ss_pred cee---------------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEe
Q psy7433 120 DIK---------------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKH 172 (213)
Q Consensus 120 ~i~---------------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~ 172 (213)
.+. .....++++++|.++++...++.|.+||..+++.........
T Consensus 218 ~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~-------- 289 (343)
T 2qe8_A 218 SMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEK-------- 289 (343)
T ss_dssp EEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGG--------
T ss_pred eEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCc--------
Confidence 111 134569999999999988889999999985565433222211
Q ss_pred cCCCeEEEEeCCCCe-EEEEecCCcE
Q psy7433 173 IGQGVTQLHVDGGSR-LFSCGADGSM 197 (213)
Q Consensus 173 ~~~~v~~~~~~~~~~-l~s~~~d~~i 197 (213)
...+.++++.+++. +++.+..+.+
T Consensus 290 -~~~p~~va~~~~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 290 -LSWTDSFNFGSDGYLYFDCNQLHHS 314 (343)
T ss_dssp -GSCEEEEEECTTSCEEEEECCGGGS
T ss_pred -eecCCeeEECCCCcEEEEeCccccc
Confidence 14688999988765 4444433333
No 209
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.28 E-value=3.6e-09 Score=80.45 Aligned_cols=183 Identities=6% Similarity=0.025 Sum_probs=115.4
Q ss_pred EEEeCCCCeEEEeeccCCCc--cEEEEeCCCcccccceeee---ee-ecCCceEEEEecCCCEEEEEcCCCcEEEEeccC
Q psy7433 13 FVFLGSCSLVATAGHSSESK--NVCLWDSLLPQKKALVQAF---VC-HDQGASSLVFAPQHQLLISAGKKGDICVIDLRQ 86 (213)
Q Consensus 13 ~~~~~~~~~l~~~g~~s~~~--~i~iwd~~~~~~~~~~~~~---~~-~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~ 86 (213)
++|+|+++.|+.+ ..++ .|.+++.. .......+ .. ....+.+++++|++..|+.+..++.|..||..+
T Consensus 176 ia~~~~g~~l~~~---d~~~~~~I~~~d~~---~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~ 249 (409)
T 3hrp_A 176 PAVTKDKQRVYSI---GWEGTHTVYVYMKA---SGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKT 249 (409)
T ss_dssp CEECTTSSEEEEE---BSSTTCEEEEEEGG---GTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTT
T ss_pred eeEecCCCcEEEE---ecCCCceEEEEEcC---CCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCC
Confidence 8899999988887 4444 78888863 22222222 11 345678899999555566677788999999987
Q ss_pred ceEEEe----cccCCCCe-e-EEEecCC-CCEEEEecCCCcee------------------------------eceEEEE
Q psy7433 87 RVIRSR----FNAHESPV-K-CLAIDPH-EEFFVTGAGDGDIK------------------------------SPVKCLA 129 (213)
Q Consensus 87 ~~~~~~----~~~~~~~i-~-~~~~~~~-~~~l~~~~~~~~i~------------------------------~~v~~~~ 129 (213)
+..... ..+....- . .++++|+ +..+++-..++.|. ..+..++
T Consensus 250 ~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia 329 (409)
T 3hrp_A 250 QEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMT 329 (409)
T ss_dssp CCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEE
T ss_pred CCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEE
Confidence 653222 22222222 3 8999995 55555555555554 1277899
Q ss_pred EccCCceEEEec-CCCcEEEEEccCCeeeeeecCCCCceeEE-----EecCCCeEEEEeCCCCeE-EEEecCCcEEEEeC
Q psy7433 130 IDPHEEFFVTGA-GDGDIKVWSLSGNHLLYNFPGEHARSSFF-----KHIGQGVTQLHVDGGSRL-FSCGADGSMKVRQL 202 (213)
Q Consensus 130 ~~~~~~~l~~~~-~dg~i~v~d~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~l-~s~~~d~~i~iw~~ 202 (213)
++|+|+++++-+ .++.|+.||+.++...... ++....... ...-.....+++++++.| ++-..++.|+.+++
T Consensus 330 ~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~-g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 330 VDEDGNFYIVDGFKGYCLRKLDILDGYVSTVA-GQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp ECTTCCEEEEETTTTCEEEEEETTTTEEEEEE-ECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred EeCCCCEEEEeCCCCCEEEEEECCCCEEEEEe-CCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 999999888877 8899999998777643322 220000000 000145889999997764 55556678887765
No 210
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.27 E-value=4.4e-09 Score=76.74 Aligned_cols=179 Identities=13% Similarity=0.112 Sum_probs=115.9
Q ss_pred ccCceEEEEEeCCCCe-EEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEec
Q psy7433 6 HNKITSDFVFLGSCSL-VATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL 84 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~-l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~ 84 (213)
+........|+|+++. +++. ..++.|..|+.. +. ...+..+...+..++++++|+++++...++.|..|+.
T Consensus 43 ~~~~~egp~~~~~g~~l~~~d---~~~~~i~~~~~~----g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~ 114 (305)
T 3dr2_A 43 QATWSEGPAWWEAQRTLVWSD---LVGRRVLGWRED----GT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDA 114 (305)
T ss_dssp CCSSEEEEEEEGGGTEEEEEE---TTTTEEEEEETT----SC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred CCcCccCCeEeCCCCEEEEEE---CCCCEEEEEeCC----CC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECC
Confidence 3445678899999984 4554 678999999862 22 3444555677899999999997776666688999998
Q ss_pred cCceEEEeccc----CCCCeeEEEecCCCCEEEE----ecC-------------CCcee---------------eceEEE
Q psy7433 85 RQRVIRSRFNA----HESPVKCLAIDPHEEFFVT----GAG-------------DGDIK---------------SPVKCL 128 (213)
Q Consensus 85 ~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~----~~~-------------~~~i~---------------~~v~~~ 128 (213)
. ++....... ....+..++++|+++.+++ +.. .+.+. .....+
T Consensus 115 ~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~p~gl 193 (305)
T 3dr2_A 115 D-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMADLDHPNGL 193 (305)
T ss_dssp T-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEEEESSEEEE
T ss_pred C-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEecCCCCcce
Confidence 6 543222111 1134678999999998776 321 12222 234678
Q ss_pred EEccCCceEEEecCC------CcEEEEEccCCeee--eeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEE
Q psy7433 129 AIDPHEEFFVTGAGD------GDIKVWSLSGNHLL--YNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVR 200 (213)
Q Consensus 129 ~~~~~~~~l~~~~~d------g~i~v~d~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw 200 (213)
+|+|+++.|+.+... +.|.+||+...... ..+.... ......+++++++.|.++..+ .|.+|
T Consensus 194 ~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~---------~~~pdgi~~d~~G~lwv~~~~-gv~~~ 263 (305)
T 3dr2_A 194 AFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVP---------DGLPDGFCVDRGGWLWSSSGT-GVCVF 263 (305)
T ss_dssp EECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCS---------SSCCCSEEECTTSCEEECCSS-EEEEE
T ss_pred EEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECC---------CCCCCeEEECCCCCEEEecCC-cEEEE
Confidence 999999977776554 78999998754310 1111000 134556788887776666644 48888
Q ss_pred eCC
Q psy7433 201 QLP 203 (213)
Q Consensus 201 ~~~ 203 (213)
+..
T Consensus 264 ~~~ 266 (305)
T 3dr2_A 264 DSD 266 (305)
T ss_dssp CTT
T ss_pred CCC
Confidence 874
No 211
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.27 E-value=2e-10 Score=86.18 Aligned_cols=117 Identities=11% Similarity=0.107 Sum_probs=91.3
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEec
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL 84 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~ 84 (213)
.+.+ |+.++| ++++|+++ .++.|++||++. .........+...+.++.+.+. .++++..||.|.+||+
T Consensus 86 ~lp~-V~~l~f--d~~~L~v~----~~~~l~v~dv~s---l~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl 153 (388)
T 1xip_A 86 EIPD-VIFVCF--HGDQVLVS----TRNALYSLDLEE---LSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDL 153 (388)
T ss_dssp ECTT-EEEEEE--ETTEEEEE----ESSEEEEEESSS---TTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEET
T ss_pred eCCC-eeEEEE--CCCEEEEE----cCCcEEEEEchh---hhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEc
Confidence 4556 999999 89999998 679999999953 3344455667778888887654 3888899999999999
Q ss_pred cCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------------------eceEEEEEccCCce
Q psy7433 85 RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------------------SPVKCLAIDPHEEF 136 (213)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------------------~~v~~~~~~~~~~~ 136 (213)
.+++... +...|+|++|+|+| ++.+..|+.++ ..|.++.|.+++.+
T Consensus 154 ~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~f 227 (388)
T 1xip_A 154 RTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDF 227 (388)
T ss_dssp TTCCEEE----EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEE
T ss_pred cCCcccc----ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeE
Confidence 9876543 34579999999999 56777777654 22888999999988
Q ss_pred EEE
Q psy7433 137 FVT 139 (213)
Q Consensus 137 l~~ 139 (213)
+++
T Consensus 228 lv~ 230 (388)
T 1xip_A 228 LAV 230 (388)
T ss_dssp EEE
T ss_pred EEE
Confidence 776
No 212
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.25 E-value=1.7e-08 Score=74.43 Aligned_cols=175 Identities=10% Similarity=0.072 Sum_probs=112.3
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceE
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVI 89 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~ 89 (213)
..+..|+|++..++..+ ..++.|..||.+ ..+ ...+. ....+.+++|+++++++++. .+ .|.+||..+++.
T Consensus 51 ~egp~~~~~~~~l~~~d--~~~~~i~~~d~~---~~~-~~~~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~ 121 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFN--ILERELHELHLA---SGR-KTVHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVL 121 (326)
T ss_dssp EEEEEEETTTTEEEEEE--GGGTEEEEEETT---TTE-EEEEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCE
T ss_pred CcCCeEeCCCCEEEEEE--CCCCEEEEEECC---CCc-EEEEE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcE
Confidence 46788999755444443 467899999973 222 22232 34678999999999877765 33 499999988765
Q ss_pred EEeccc----CCCCeeEEEecCCCCEEEEecC--------------CCcee------eceEEEEEccCCceEE-EecCCC
Q psy7433 90 RSRFNA----HESPVKCLAIDPHEEFFVTGAG--------------DGDIK------SPVKCLAIDPHEEFFV-TGAGDG 144 (213)
Q Consensus 90 ~~~~~~----~~~~i~~~~~~~~~~~l~~~~~--------------~~~i~------~~v~~~~~~~~~~~l~-~~~~dg 144 (213)
...... ....+..+.++|+++.+++... ++.+. .....++|+|+++.++ +.+.++
T Consensus 122 ~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~ 201 (326)
T 2ghs_A 122 TLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFADISIPNSICFSPDGTTGYFVDTKVN 201 (326)
T ss_dssp EEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEEESSEEEEEECTTSCEEEEEETTTC
T ss_pred EEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCC
Confidence 432221 1235789999999987665432 12221 2356889999998654 445678
Q ss_pred cEEEEEcc--CC-ee-----eeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEe-cCCcEEEEeCC
Q psy7433 145 DIKVWSLS--GN-HL-----LYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCG-ADGSMKVRQLP 203 (213)
Q Consensus 145 ~i~v~d~~--~~-~~-----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~-~d~~i~iw~~~ 203 (213)
.|.+||+. ++ .. ...+... ...+..+++++++.|..+. .++.|..|+..
T Consensus 202 ~I~~~d~~~~~Gl~~~~~~~~~~~~~~----------~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~ 259 (326)
T 2ghs_A 202 RLMRVPLDARTGLPTGKAEVFIDSTGI----------KGGMDGSVCDAEGHIWNARWGEGAVDRYDTD 259 (326)
T ss_dssp EEEEEEBCTTTCCBSSCCEEEEECTTS----------SSEEEEEEECTTSCEEEEEETTTEEEEECTT
T ss_pred EEEEEEcccccCCcccCceEEEECCCC----------CCCCCeeEECCCCCEEEEEeCCCEEEEECCC
Confidence 99999985 44 21 1122111 1356788898876654444 56789999874
No 213
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.24 E-value=5.5e-10 Score=83.59 Aligned_cols=151 Identities=9% Similarity=0.086 Sum_probs=100.5
Q ss_pred CCCeEEEeecc---CCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEc----------CCCcEEEEec
Q psy7433 18 SCSLVATAGHS---SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG----------KKGDICVIDL 84 (213)
Q Consensus 18 ~~~~l~~~g~~---s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~v~iwd~ 84 (213)
++++++....+ ..|+.|.+||. .+.+.+..+..+..+ .++|+|+++++++++ .++.|.+||.
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~---~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~ 88 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDY---TNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDA 88 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEET---TTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEET
T ss_pred CCCEEEEECCCCCccccCeEEEEEC---CCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEEC
Confidence 55555554210 13679999998 455666666655544 899999999999886 2567999999
Q ss_pred cCceEEEecccCCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEecC--CCcEEEEEccCCeeeee-ec
Q psy7433 85 RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAG--DGDIKVWSLSGNHLLYN-FP 161 (213)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~~--dg~i~v~d~~~~~~~~~-~~ 161 (213)
.+.+.+..+........ .+ ..+..++++|+|++|++++. ++.|.+||+.+++.+.. +.
T Consensus 89 ~t~~~~~~i~~~~~~~~------~g-------------~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~ 149 (361)
T 2oiz_A 89 DKLTFEKEISLPPKRVQ------GL-------------NYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTA 149 (361)
T ss_dssp TTCCEEEEEEECTTBCC------BC-------------CCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGG
T ss_pred cCCcEEEEEEcCccccc------cC-------------CCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEec
Confidence 98887776653211000 00 12345667777777777753 57899999999988877 65
Q ss_pred CCCCceeEEEecCCCeEEEEeCCCC--eEEEEecCCcEEEEeCCC
Q psy7433 162 GEHARSSFFKHIGQGVTQLHVDGGS--RLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 162 ~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~d~~i~iw~~~~ 204 (213)
.. ....+.+.|++ .+++.+.||.+.+|++..
T Consensus 150 ~~------------~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~ 182 (361)
T 2oiz_A 150 AA------------GCWSVIPQPNRPRSFMTICGDGGLLTINLGE 182 (361)
T ss_dssp GT------------TEEEEEECTTSSSEEEEEETTSSEEEEEECT
T ss_pred CC------------CcceeEEcCCCCeeEEEECCCCcEEEEEECC
Confidence 42 22334455633 577788888888888764
No 214
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.24 E-value=2.9e-09 Score=77.73 Aligned_cols=167 Identities=14% Similarity=0.151 Sum_probs=109.2
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeee-----ecCCceEEEEecCCCEEEE----EcC
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVC-----HDQGASSLVFAPQHQLLIS----AGK 75 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~----~~~ 75 (213)
.+...+..++++++|+++++. ..++.|.+|+.+ ++ ...+.. ....+..++++++|+++++ |..
T Consensus 83 ~~~~~~~gl~~d~dG~l~v~~---~~~~~v~~~~~~----g~-~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~ 154 (305)
T 3dr2_A 83 DATAFTNGNAVDAQQRLVHCE---HGRRAITRSDAD----GQ-AHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLR 154 (305)
T ss_dssp ESCSCEEEEEECTTSCEEEEE---TTTTEEEEECTT----SC-EEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGS
T ss_pred CCCCccceeeECCCCCEEEEE---CCCCEEEEECCC----CC-EEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCcc
Confidence 345668899999999987776 456789999973 22 122211 1234678999999998876 332
Q ss_pred -------------CCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCC------Ccee--------------
Q psy7433 76 -------------KGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD------GDIK-------------- 122 (213)
Q Consensus 76 -------------d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~------~~i~-------------- 122 (213)
.+.|..+|..+++..... .......++|+|+++.|+++... +.+.
T Consensus 155 ~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~ 232 (305)
T 3dr2_A 155 KPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRH 232 (305)
T ss_dssp CGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEE
T ss_pred ccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeE
Confidence 256777887666543332 33456789999999977776554 3443
Q ss_pred ------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCC
Q psy7433 123 ------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADG 195 (213)
Q Consensus 123 ------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~ 195 (213)
..+..++++++|++.+ ++.+ .|.+||. .++.+..+..+ ..+..++|.+++ .|..++.++
T Consensus 233 ~~~~~~~~pdgi~~d~~G~lwv-~~~~-gv~~~~~-~g~~~~~~~~~-----------~~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 233 FASVPDGLPDGFCVDRGGWLWS-SSGT-GVCVFDS-DGQLLGHIPTP-----------GTASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp EECCSSSCCCSEEECTTSCEEE-CCSS-EEEEECT-TSCEEEEEECS-----------SCCCEEEECTTSCEEEEEETTE
T ss_pred EEECCCCCCCeEEECCCCCEEE-ecCC-cEEEECC-CCCEEEEEECC-----------CceeEEEEeCCCCEEEEEcCCe
Confidence 1123578888888444 4444 4889997 56666666554 247788898754 566666554
No 215
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.23 E-value=1.2e-12 Score=98.26 Aligned_cols=169 Identities=8% Similarity=0.065 Sum_probs=93.8
Q ss_pred CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCC
Q psy7433 18 SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHE 97 (213)
Q Consensus 18 ~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~ 97 (213)
++..++++ +.|+.|..||. .+++.+..+.. ..+.+..+..++..+++++.|+.|+.||..+++.+..+..+.
T Consensus 8 ~~~~v~~g---s~dg~v~a~d~---~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~ 79 (369)
T 2hz6_A 8 PETLLFVS---TLDGSLHAVSK---RTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTI 79 (369)
T ss_dssp CTTEEEEE---ETTSEEEEEET---TTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCH
T ss_pred eCCEEEEE---cCCCEEEEEEC---CCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccC
Confidence 46677777 58999999998 56777766654 455555566777788888899999999999887665543221
Q ss_pred C-Cee-EEEecCCCCEEEEecCCCcee-------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecC
Q psy7433 98 S-PVK-CLAIDPHEEFFVTGAGDGDIK-------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPG 162 (213)
Q Consensus 98 ~-~i~-~~~~~~~~~~l~~~~~~~~i~-------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~ 162 (213)
. .+. ...+. .+..+++++.++.+. ..-....++|++..+++++.++.|+.||.++++.+..+..
T Consensus 80 ~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~ 158 (369)
T 2hz6_A 80 PELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATY 158 (369)
T ss_dssp HHHHTTCSCC------CCCCEEEEEEEEECCC----------------------EEEEEEEEEEECCCSSSSSCCCEEEE
T ss_pred ccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCcccccccCCEEEEEecCCEEEEEECCCCCEEEeEec
Confidence 1 000 00011 233444555555443 1111245567788899999999999999998887655542
Q ss_pred CCCceeEEEecCCCeEEEEeCC----CCeEEEEecCCcEEEEeCCCCcc
Q psy7433 163 EHARSSFFKHIGQGVTQLHVDG----GSRLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 163 ~~~~~~~~~~~~~~v~~~~~~~----~~~l~s~~~d~~i~iw~~~~~~~ 207 (213)
.. .....+.+ ++.+++++.||.++.||..+++.
T Consensus 159 ~~------------~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~ 195 (369)
T 2hz6_A 159 FD------------YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDV 195 (369)
T ss_dssp EE------------ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCE
T ss_pred cc------------ccCccccCCccccceEEEECCCCEEEEEECCCCcE
Confidence 11 11122232 25788889999999999988764
No 216
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.21 E-value=1.9e-09 Score=87.38 Aligned_cols=183 Identities=12% Similarity=0.120 Sum_probs=109.0
Q ss_pred cccCceEEEEEeCCCCeEEEeec--cCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCC-----
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGH--SSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKG----- 77 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~--~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----- 77 (213)
+|...+..++|||||++||.+.. ++....|++||+. +++.+.. .........++|+ |++.|+.++.+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~---tg~~~~~-~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~ 200 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVE---SKQPLET-PLKDVKFSGISWL-GNEGFFYSSYDKPDGSE 200 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETT---TCSEEEE-EEEEEESCCCEEE-TTTEEEEEESSCCC---
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECC---CCCCCcc-ccCCceeccEEEe-CCCEEEEEEecCccccc
Confidence 35567889999999999985321 0344689999994 4433322 1111123578899 999998887764
Q ss_pred --------cEEEEeccCce----EEEeccc-CCCCeeEEEecCCCCEEEEecCC----Ccee------------------
Q psy7433 78 --------DICVIDLRQRV----IRSRFNA-HESPVKCLAIDPHEEFFVTGAGD----GDIK------------------ 122 (213)
Q Consensus 78 --------~v~iwd~~~~~----~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~~----~~i~------------------ 122 (213)
.|++|++.++. .+..... +......+.++|++++++..... ..+.
T Consensus 201 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~ 280 (693)
T 3iuj_A 201 LSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDL 280 (693)
T ss_dssp ----CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSS
T ss_pred ccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCC
Confidence 39999987653 3333333 34457789999999987654332 1222
Q ss_pred eceEEEEEccCCce-EEEecCC---CcEEEEEccCCee--eeeecCCCCceeEEEecCCCeEEEEeCCC-CeEEE-EecC
Q psy7433 123 SPVKCLAIDPHEEF-FVTGAGD---GDIKVWSLSGNHL--LYNFPGEHARSSFFKHIGQGVTQLHVDGG-SRLFS-CGAD 194 (213)
Q Consensus 123 ~~v~~~~~~~~~~~-l~~~~~d---g~i~v~d~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s-~~~d 194 (213)
...... |++++.. ++....+ +.|..+|+.++.. ...+..+. ..+. .|+++ +.|+. ...+
T Consensus 281 ~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~----------~~~~--~~s~~g~~lv~~~~~~ 347 (693)
T 3iuj_A 281 DADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPER----------QQVL--TVHSGSGYLFAEYMVD 347 (693)
T ss_dssp SSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCC----------SSCE--EEEEETTEEEEEEEET
T ss_pred CceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCC----------CCEE--EEEEECCEEEEEEEEC
Confidence 111222 5566554 4444433 5788889876543 23333333 2233 56653 44544 4445
Q ss_pred C--cEEEEeCCCC
Q psy7433 195 G--SMKVRQLPDR 205 (213)
Q Consensus 195 ~--~i~iw~~~~~ 205 (213)
+ .|++|++..+
T Consensus 348 g~~~l~~~d~~g~ 360 (693)
T 3iuj_A 348 ATARVEQFDYEGK 360 (693)
T ss_dssp TEEEEEEECTTSC
T ss_pred CeeEEEEEECCCC
Confidence 5 6888888744
No 217
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.20 E-value=8.5e-10 Score=82.44 Aligned_cols=179 Identities=7% Similarity=-0.063 Sum_probs=115.1
Q ss_pred EEEEeCCCCeEEEeec-------cCCCccEEEEeCCCcccccceeeeeee-------cCCceEEEEecCCCEEEEEcC--
Q psy7433 12 DFVFLGSCSLVATAGH-------SSESKNVCLWDSLLPQKKALVQAFVCH-------DQGASSLVFAPQHQLLISAGK-- 75 (213)
Q Consensus 12 ~~~~~~~~~~l~~~g~-------~s~~~~i~iwd~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~-- 75 (213)
.+.++|+++.++.+.. +..++.|.+||. .+.+.+..+... ......++++|+|++++.+..
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~---~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~ 145 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDP---VTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGS 145 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECT---TTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSS
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEEC---CCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCC
Confidence 7999999999888721 013688999999 677777777543 134678999999999998864
Q ss_pred CCcEEE--EeccCceEEEeccc------------------CCCCeeEEEe--------------------------cCCC
Q psy7433 76 KGDICV--IDLRQRVIRSRFNA------------------HESPVKCLAI--------------------------DPHE 109 (213)
Q Consensus 76 d~~v~i--wd~~~~~~~~~~~~------------------~~~~i~~~~~--------------------------~~~~ 109 (213)
+..+.+ +|+.+ +..+.. ..+.+..+.. .+++
T Consensus 146 ~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~ 222 (368)
T 1mda_H 146 SAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYP 222 (368)
T ss_dssp SCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTT
T ss_pred CCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccC
Confidence 456888 88866 122210 0000101111 2222
Q ss_pred CEEEEecCCCcee-----------------------------eceEEEEEccCCceEEEecC---------CCcEEEEEc
Q psy7433 110 EFFVTGAGDGDIK-----------------------------SPVKCLAIDPHEEFFVTGAG---------DGDIKVWSL 151 (213)
Q Consensus 110 ~~l~~~~~~~~i~-----------------------------~~v~~~~~~~~~~~l~~~~~---------dg~i~v~d~ 151 (213)
..++..+. +.+. .....+.++|+++.++++.. ++.+.++|+
T Consensus 223 ~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~ 301 (368)
T 1mda_H 223 GMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTA 301 (368)
T ss_dssp TEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEES
T ss_pred CEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEEC
Confidence 22222222 2221 00112789999987776533 235669999
Q ss_pred cCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe--EEEEe-cCCcEEEEeCCCCccc
Q psy7433 152 SGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR--LFSCG-ADGSMKVRQLPDRDAV 208 (213)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~s~~-~d~~i~iw~~~~~~~~ 208 (213)
.+.+.+..+... .....++++|++. +++.. .++.|.++|+.+.+.+
T Consensus 302 ~t~~vv~~i~vg-----------~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv 350 (368)
T 1mda_H 302 SVGQTSGPISNG-----------HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQ 350 (368)
T ss_dssp SSCCEEECCEEE-----------EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEE
T ss_pred CCCeEEEEEECC-----------CCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEE
Confidence 999988888764 3588899999763 56666 5999999999987543
No 218
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.14 E-value=3.7e-09 Score=86.27 Aligned_cols=181 Identities=12% Similarity=0.080 Sum_probs=111.4
Q ss_pred EEEEEeCCCCeEEEeeccCCCc--------------cEEEEeCCCcccc-cceeeeeeecCCceEEEEecCCCEEEEEcC
Q psy7433 11 SDFVFLGSCSLVATAGHSSESK--------------NVCLWDSLLPQKK-ALVQAFVCHDQGASSLVFAPQHQLLISAGK 75 (213)
Q Consensus 11 ~~~~~~~~~~~l~~~g~~s~~~--------------~i~iwd~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 75 (213)
..++|+|| +.|+.+. .++ .|++|++..+... ..+.....+...+..+.|+|+|++|+..+.
T Consensus 212 ~~~~wspD-~~l~~~~---~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~ 287 (741)
T 1yr2_A 212 SGLAWLGN-DALLYSR---FAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSS 287 (741)
T ss_dssp CCCEESTT-SEEEEEE---CCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred ccEEEECC-CEEEEEE---ecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEE
Confidence 57899999 8888873 333 3889998432211 122111122234789999999998887764
Q ss_pred C-----CcEEEEeccCc--eEEEecccCCCCeeEEEecCCCCEEEEecCCCc----ee-------------------ece
Q psy7433 76 K-----GDICVIDLRQR--VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGD----IK-------------------SPV 125 (213)
Q Consensus 76 d-----~~v~iwd~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~----i~-------------------~~v 125 (213)
+ ..|.+||+.++ +....+..+........ +|+++.|+..+.++. +. ..+
T Consensus 288 ~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l 366 (741)
T 1yr2_A 288 EGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNL 366 (741)
T ss_dssp CTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEE
T ss_pred ccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeE
Confidence 4 38999999876 31344444444444443 477777666554321 21 224
Q ss_pred EEEEEccCCceEEEecCCCcEEEEEcc-CCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEE-EE---ecCCcEEE
Q psy7433 126 KCLAIDPHEEFFVTGAGDGDIKVWSLS-GNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLF-SC---GADGSMKV 199 (213)
Q Consensus 126 ~~~~~~~~~~~l~~~~~dg~i~v~d~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~-s~---~~d~~i~i 199 (213)
..+.|+ ++.++++...++..++|.+. +++....+..+. ...+..+.++|++ .++ +. ...+.+++
T Consensus 367 ~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~---------~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~ 436 (741)
T 1yr2_A 367 ESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPG---------IGSASGLSGRPGDRHAYLSFSSFTQPATVLA 436 (741)
T ss_dssp EEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSS---------SCEEEEEECCBTCSCEEEEEEETTEEEEEEE
T ss_pred EEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCC---------CeEEEEeecCCCCCEEEEEEcCCCCCCEEEE
Confidence 456666 45677888888887777654 455555554322 1568888998854 343 22 34578999
Q ss_pred EeCCCCc
Q psy7433 200 RQLPDRD 206 (213)
Q Consensus 200 w~~~~~~ 206 (213)
||+.+++
T Consensus 437 ~d~~tg~ 443 (741)
T 1yr2_A 437 LDPATAK 443 (741)
T ss_dssp EETTTTE
T ss_pred EECCCCc
Confidence 9998764
No 219
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.09 E-value=1.6e-07 Score=66.84 Aligned_cols=187 Identities=13% Similarity=-0.011 Sum_probs=122.8
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCC-ceEEEEecCCCEEEE-EcCCCcEEEEeccCc
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQG-ASSLVFAPQHQLLIS-AGKKGDICVIDLRQR 87 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~-~~~d~~v~iwd~~~~ 87 (213)
...+.|+|++.++++.|. ..++.|.+.|+ .+++.+..+...... ...+++. ++.|+. .-.++.+.++|..+.
T Consensus 23 ~~Gl~~~~dg~Lyvstg~-~~~s~v~~iD~---~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~ 96 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGL-YGRSSVRQVAL---QTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTL 96 (266)
T ss_dssp EEEEEECSTTEEEEEECS-TTTCEEEEEET---TTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTT
T ss_pred cccEEEeCCCeEEEECCC-CCCCEEEEEEC---CCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCC
Confidence 578999998877776631 13689999999 566676665432221 1234444 545554 446789999999999
Q ss_pred eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------------eceEEEEEccCCceEEEecCCCc
Q psy7433 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------------SPVKCLAIDPHEEFFVTGAGDGD 145 (213)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------------~~v~~~~~~~~~~~l~~~~~dg~ 145 (213)
+.+..++.... ....++++++.++++..++.+. ..++.+.|. +++.++....++.
T Consensus 97 ~v~~~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~ 173 (266)
T 2iwa_A 97 SNIKNFTHQMK--DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDC 173 (266)
T ss_dssp EEEEEEECCSS--SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSE
T ss_pred cEEEEEECCCC--CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCe
Confidence 99888864312 2244556777777766666664 135567777 6766666656789
Q ss_pred EEEEEccCCeeeeeecCCCCcee---EEEecCCCeEEEEeCCCC-e-EEEEecCCcEEEEeCCCC
Q psy7433 146 IKVWSLSGNHLLYNFPGEHARSS---FFKHIGQGVTQLHVDGGS-R-LFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 146 i~v~d~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~-~-l~s~~~d~~i~iw~~~~~ 205 (213)
|.+.|..+++.+..+........ .........+.++++|++ + ++++...+.+.+.++...
T Consensus 174 V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 174 IARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 99999999998888765310000 000001357899999864 4 677778888988887654
No 220
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.08 E-value=4.1e-07 Score=64.93 Aligned_cols=183 Identities=11% Similarity=0.016 Sum_probs=111.9
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEE-EEcCCCcEEEEeccC
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLI-SAGKKGDICVIDLRQ 86 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~iwd~~~ 86 (213)
..+..++|+|++..|..+. ..++.|..++.+ .......+.........+++++++..|+ +-...+.|.++++..
T Consensus 36 ~~~~gi~~d~~~~~ly~~d--~~~~~I~~~~~~---g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g 110 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTD--ISEPSIGRASLH---GGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDG 110 (267)
T ss_dssp EEEEEEEEETTTTEEEEEE--TTTTEEEEEESS---SCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CcEEEEEEecCCCEEEEEE--CCCCEEEEEecC---CCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCC
Confidence 3467899999766555543 467899999984 2222222222224678999999765555 445567899999865
Q ss_pred ceEEEecccCCCCeeEEEecCCCCEEEEecCC---Ccee-----------------eceEEEEEccCCceE-EEecCCCc
Q psy7433 87 RVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD---GDIK-----------------SPVKCLAIDPHEEFF-VTGAGDGD 145 (213)
Q Consensus 87 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~---~~i~-----------------~~v~~~~~~~~~~~l-~~~~~dg~ 145 (213)
................++++|++..+..+... +.+. .....++++|++..| ++-...+.
T Consensus 111 ~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~ 190 (267)
T 1npe_A 111 TQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHR 190 (267)
T ss_dssp CSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCE
Confidence 43222222222457899999965554444332 3332 356789999986654 45556688
Q ss_pred EEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeE-EEEecCCcEEEEeCCCCcc
Q psy7433 146 IKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRL-FSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 146 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l-~s~~~d~~i~iw~~~~~~~ 207 (213)
|.++|+........+... .....++.. ++.| ++....+.|..+|..+++.
T Consensus 191 I~~~~~~g~~~~~~~~~~-----------~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~ 241 (267)
T 1npe_A 191 AECLNPAQPGRRKVLEGL-----------QYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKE 241 (267)
T ss_dssp EEEEETTEEEEEEEEECC-----------CSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEE
T ss_pred EEEEecCCCceEEEecCC-----------CCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCc
Confidence 999998654433333221 234566665 4454 4444568999999887643
No 221
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.06 E-value=3.4e-08 Score=73.99 Aligned_cols=155 Identities=10% Similarity=0.027 Sum_probs=99.8
Q ss_pred EEEeCCCCeEEEeecc--CCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEc----------CCCcEE
Q psy7433 13 FVFLGSCSLVATAGHS--SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG----------KKGDIC 80 (213)
Q Consensus 13 ~~~~~~~~~l~~~g~~--s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~v~ 80 (213)
....|+++.+...... ..++.|.+.|. .+.+.+..+.....+ . ++++|++++++.++ .++.|.
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~---~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~Vs 112 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDG---EAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVE 112 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEET---TTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEEC---CCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEE
Confidence 3456888888777310 01679999998 677777777755454 4 99999999888775 357899
Q ss_pred EEeccCceEEEecccCC-CCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEecC--CCcEEEEEccCCeee
Q psy7433 81 VIDLRQRVIRSRFNAHE-SPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAG--DGDIKVWSLSGNHLL 157 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~~--dg~i~v~d~~~~~~~ 157 (213)
+||..+.+.+..+.-.. .... .-.....+.|+|||+++++++. ++.|.++|+.+.+.+
T Consensus 113 viD~~t~~v~~~I~v~~g~r~~-------------------~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv 173 (386)
T 3sjl_D 113 VFDPVTLLPTADIELPDAPRFL-------------------VGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFK 173 (386)
T ss_dssp EECTTTCCEEEEEEETTCCCCC-------------------BSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEE
T ss_pred EEECCCCeEEEEEECCCccccc-------------------cCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEE
Confidence 99999998877764221 0000 0011234556666676666653 578999999999888
Q ss_pred eeecCCCCceeEEEecCCCeEEEEeCC-CCeEEEEecCCcEEEEeCCC
Q psy7433 158 YNFPGEHARSSFFKHIGQGVTQLHVDG-GSRLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s~~~d~~i~iw~~~~ 204 (213)
.++.... ...+ +.. ...+++.+.||++.+.++.+
T Consensus 174 ~tI~v~g------------~~~~-~P~g~~~~~~~~~DG~~~~v~~~~ 208 (386)
T 3sjl_D 174 RMLDVPD------------CYHI-FPTAPDTFFMHCRDGSLAKVAFGT 208 (386)
T ss_dssp EEEECCS------------EEEE-EEEETTEEEEEETTSCEEEEECCS
T ss_pred EEEECCC------------ccee-ecCCCceeEEECCCCCEEEEECCC
Confidence 8886532 1111 111 23455666677777777655
No 222
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.03 E-value=1.7e-07 Score=69.05 Aligned_cols=162 Identities=12% Similarity=0.100 Sum_probs=102.2
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeee-----cCCceEEEEecCCCEEEEEcC------
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCH-----DQGASSLVFAPQHQLLISAGK------ 75 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~------ 75 (213)
...+.++.++|+|+++++. .+ .|.+||.+ .++. ..+... ...+..++++|+|+++++...
T Consensus 89 ~~~v~~i~~~~dg~l~v~~----~~-gl~~~d~~---~g~~-~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~ 159 (326)
T 2ghs_A 89 PFMGSALAKISDSKQLIAS----DD-GLFLRDTA---TGVL-TLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETG 159 (326)
T ss_dssp SSCEEEEEEEETTEEEEEE----TT-EEEEEETT---TCCE-EEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTT
T ss_pred CCcceEEEEeCCCeEEEEE----CC-CEEEEECC---CCcE-EEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCC
Confidence 3568899999999988876 33 49999973 2222 222111 134788999999987665432
Q ss_pred CCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEec-CCCcee-------------------------eceEEEE
Q psy7433 76 KGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGA-GDGDIK-------------------------SPVKCLA 129 (213)
Q Consensus 76 d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~~~~i~-------------------------~~v~~~~ 129 (213)
.+.|..++ +++... +.........++|+|+++.++.+. .++.+. ..+..++
T Consensus 160 ~~~l~~~~--~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~ 236 (326)
T 2ghs_A 160 AGSIYHVA--KGKVTK-LFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSV 236 (326)
T ss_dssp CEEEEEEE--TTEEEE-EEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEE
T ss_pred ceEEEEEe--CCcEEE-eeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeE
Confidence 24455555 454332 222233567899999998654442 222221 1245678
Q ss_pred EccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeC-CC-CeEEEE
Q psy7433 130 IDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVD-GG-SRLFSC 191 (213)
Q Consensus 130 ~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~-~~l~s~ 191 (213)
++++|.+.++...++.|.+||. +++.+..+..+. ..+++++|. ++ +.|+.+
T Consensus 237 ~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~----------~~~~~~af~g~d~~~L~vt 289 (326)
T 2ghs_A 237 CDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPG----------KQTTCPAFIGPDASRLLVT 289 (326)
T ss_dssp ECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSC----------SBEEEEEEESTTSCEEEEE
T ss_pred ECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCC----------CCcEEEEEecCCCCEEEEE
Confidence 8888887776666788999998 566666665543 468999997 65 445433
No 223
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.99 E-value=3.3e-08 Score=72.56 Aligned_cols=173 Identities=13% Similarity=0.111 Sum_probs=112.2
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCce
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRV 88 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~ 88 (213)
.+.++...+++.+++. +.++.|..+|. . ++.+..+......+.++...+++.+++ ++ +.|..+| .+++
T Consensus 138 ~~~~~~~~~~g~l~vg----t~~~~l~~~d~---~-g~~~~~~~~~~~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~ 205 (330)
T 3hxj_A 138 IYATPIVSEDGTIYVG----SNDNYLYAINP---D-GTEKWRFKTNDAITSAASIGKDGTIYF-GS--DKVYAIN-PDGT 205 (330)
T ss_dssp CCSCCEECTTSCEEEE----CTTSEEEEECT---T-SCEEEEEECSSCCCSCCEECTTCCEEE-ES--SSEEEEC-TTSC
T ss_pred eeeeeEEcCCCEEEEE----cCCCEEEEECC---C-CCEeEEEecCCCceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCc
Confidence 3455566667775554 36789999997 3 445545544455677777777776544 44 7899999 7777
Q ss_pred EEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------eceEEEEEccCCceEEEecCCCcEEEEEcc
Q psy7433 89 IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLS 152 (213)
Q Consensus 89 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~ 152 (213)
....+......+.++...+++...+ ++.++.+. ..+..+.+.+++ .|..++.+|.|..+|.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~g~l~v-~t~~~gl~~~~~~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~- 282 (330)
T 3hxj_A 206 EKWNFYAGYWTVTRPAISEDGTIYV-TSLDGHLYAINPDGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP- 282 (330)
T ss_dssp EEEEECCSSCCCSCCEECTTSCEEE-EETTTEEEEECTTSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-
T ss_pred EEEEEccCCcceeceEECCCCeEEE-EcCCCeEEEECCCCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-
Confidence 6666655556678888888775444 44443332 122334454455 4667777888999995
Q ss_pred CCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCc
Q psy7433 153 GNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 206 (213)
+++....+.... ..+.++...+++.|..++.+|.+++......+
T Consensus 283 ~g~~~~~~~~~~----------~~~~~~~~d~~g~l~~gt~~G~~~~~~~~~~~ 326 (330)
T 3hxj_A 283 DGTEKWNFETGS----------WIIATPVIDENGTIYFGTRNGKFYALFNLEHH 326 (330)
T ss_dssp TSCEEEEEECSS----------CCCSCCEECTTCCEEEECTTSCEEEEEC----
T ss_pred CCcEEEEEEcCC----------ccccceEEcCCCEEEEEcCCCeEEEEeccccc
Confidence 666665554432 45666777778889999999999998876543
No 224
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.95 E-value=7.1e-08 Score=71.57 Aligned_cols=189 Identities=10% Similarity=0.050 Sum_probs=110.8
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeee-------eeecCCceEEEEecCCCEEEEEcC-----
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAF-------VCHDQGASSLVFAPQHQLLISAGK----- 75 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~----- 75 (213)
..+..++++|+|+++++... ..++.++||.+. .++ +..+ ..+...+..++++++++++++-..
T Consensus 17 ~~p~~va~~~~g~~~v~~~~-~~~~~~~l~~~~---~g~-~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~ 91 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQ-FYQPEMQVAELT---QDG-LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKS 91 (343)
T ss_dssp SCEEEEEECTTSCEEEEECG-GGCCSCSEEEEE---TTE-EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTS
T ss_pred CCcceEEECCCCCEEEEeCC-CCCCceEEEEEC---CCC-eecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCC
Confidence 57889999999999998621 122336666653 121 2211 123457899999999876655433
Q ss_pred CCcEEEEeccCceEEEecccC------CCCeeEEEecCCCCEE-EEec---CCCcee-----------------------
Q psy7433 76 KGDICVIDLRQRVIRSRFNAH------ESPVKCLAIDPHEEFF-VTGA---GDGDIK----------------------- 122 (213)
Q Consensus 76 d~~v~iwd~~~~~~~~~~~~~------~~~i~~~~~~~~~~~l-~~~~---~~~~i~----------------------- 122 (213)
+..|.+||+.+++.+..+... ...+..++++|++..+ ++.. .++.+.
T Consensus 92 ~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~ 171 (343)
T 2qe8_A 92 VPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPED 171 (343)
T ss_dssp CCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCS
T ss_pred CCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccc
Confidence 578999999998866655421 2346789999764443 4433 222221
Q ss_pred -----------------------eceEEEEEccCCceEEEecCCC-cEEEEEccC---Ceee-eeecCCCCceeEEEecC
Q psy7433 123 -----------------------SPVKCLAIDPHEEFFVTGAGDG-DIKVWSLSG---NHLL-YNFPGEHARSSFFKHIG 174 (213)
Q Consensus 123 -----------------------~~v~~~~~~~~~~~l~~~~~dg-~i~v~d~~~---~~~~-~~~~~~~~~~~~~~~~~ 174 (213)
..+..++|+|+++.|+.+..++ .+..++... +... ..+... .. .....
T Consensus 172 ~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---~~-~~g~~ 247 (343)
T 2qe8_A 172 IDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSK---IE-RYSEK 247 (343)
T ss_dssp CCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTT---CE-EEEEC
T ss_pred cceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcc---eE-ecccC
Confidence 1257799999998777776655 555555321 1000 000000 00 00011
Q ss_pred CCeEEEEeCCCCe-EEEEecCCcEEEEeCCCC
Q psy7433 175 QGVTQLHVDGGSR-LFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 175 ~~v~~~~~~~~~~-l~s~~~d~~i~iw~~~~~ 205 (213)
.....+++++++. +++...++.|.+||..++
T Consensus 248 g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G 279 (343)
T 2qe8_A 248 PICDGISIDKDHNIYVGDLAHSAIGVITSADR 279 (343)
T ss_dssp CSCSCEEECTTCCEEEEEGGGTEEEEEETTTT
T ss_pred CCCceEEECCCCCEEEEccCCCeEEEEECCCC
Confidence 3456688888765 556667789999998433
No 225
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.94 E-value=1.7e-07 Score=73.49 Aligned_cols=171 Identities=9% Similarity=0.057 Sum_probs=123.8
Q ss_pred CCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeee-cCCceEEEE-e-cCCCEEEEEc------------------C
Q psy7433 17 GSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCH-DQGASSLVF-A-PQHQLLISAG------------------K 75 (213)
Q Consensus 17 ~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~-~~~v~~~~~-~-~~~~~l~~~~------------------~ 75 (213)
+||+++.... ..++.|.+.|+ ...++.+.+.-. ......+++ + |+++++++++ .
T Consensus 99 ~DG~~lfVnd--~~~~rVavIdl---~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~ 173 (595)
T 1fwx_A 99 YDGRFLFMND--KANTRVARVRC---DVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANY 173 (595)
T ss_dssp EEEEEEEEEE--TTTTEEEEEET---TTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGE
T ss_pred cCCCEEEEEc--CCCCEEEEEEC---CCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCccccccccc
Confidence 3888877774 46778999999 555655544322 245778888 4 8999998884 3
Q ss_pred CCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCce---------------e------------------
Q psy7433 76 KGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI---------------K------------------ 122 (213)
Q Consensus 76 d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i---------------~------------------ 122 (213)
++.+.+.|..+.+...++.-.. ....++++|+++++++.+.+..- .
T Consensus 174 ~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~ 252 (595)
T 1fwx_A 174 VNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE 252 (595)
T ss_dssp EEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE
T ss_pred CceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeE
Confidence 4679999999998888876433 45788899999999888866411 0
Q ss_pred ------------------------eceEEEEEccCCceEEEec-CCCcEEEEEccCCe------------eeeeecCCCC
Q psy7433 123 ------------------------SPVKCLAIDPHEEFFVTGA-GDGDIKVWSLSGNH------------LLYNFPGEHA 165 (213)
Q Consensus 123 ------------------------~~v~~~~~~~~~~~l~~~~-~dg~i~v~d~~~~~------------~~~~~~~~~~ 165 (213)
....++.++|||+++++++ .+.+|.++|+.+.+ .......
T Consensus 253 i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v--- 329 (595)
T 1fwx_A 253 LNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL--- 329 (595)
T ss_dssp ETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC---
T ss_pred ECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC---
Confidence 2346689999999766554 67899999998653 1222222
Q ss_pred ceeEEEecCCCeEEEEeCCCCeE-EEEecCCcEEEEeCCC
Q psy7433 166 RSSFFKHIGQGVTQLHVDGGSRL-FSCGADGSMKVRQLPD 204 (213)
Q Consensus 166 ~~~~~~~~~~~v~~~~~~~~~~l-~s~~~d~~i~iw~~~~ 204 (213)
+.....++|+|++.+ ++.-.|+.|.+||+..
T Consensus 330 --------G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 330 --------GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp --------CSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred --------CCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 357899999998764 4556799999999876
No 226
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.93 E-value=2.9e-07 Score=69.12 Aligned_cols=150 Identities=9% Similarity=-0.044 Sum_probs=97.3
Q ss_pred EeCCCCeEEEeeccC-CCc---cEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEc----------CCCcEE
Q psy7433 15 FLGSCSLVATAGHSS-ESK---NVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG----------KKGDIC 80 (213)
Q Consensus 15 ~~~~~~~l~~~g~~s-~~~---~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~v~ 80 (213)
..|+++++.... . ... .|.++|. .+.+.+..+.....+ .++++|++++++.+. .++.|.
T Consensus 28 ~~~~~~~~yv~~--~~~~~~~~~v~v~D~---~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~ 100 (373)
T 2mad_H 28 PGADGRRSYINL--PAHHSAIIQQWVLDA---GSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVE 100 (373)
T ss_pred CCCCCCEEEEeC--CcccCCccEEEEEEC---CCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEE
Confidence 346788777761 1 122 8899998 456666666543333 999999999999885 367899
Q ss_pred EEeccCceEEEecccCC-CCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEecC--CCcEEEEEccCCeee
Q psy7433 81 VIDLRQRVIRSRFNAHE-SPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAG--DGDIKVWSLSGNHLL 157 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~~--dg~i~v~d~~~~~~~ 157 (213)
+||..+.+.+..+.... ... ..+ .....+.|+|||++|++++. ++.|.++| .+++.+
T Consensus 101 viD~~t~~~~~~i~~~~~~~~------------~~g-------~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~ 160 (373)
T 2mad_H 101 VFDPVTFLPIADIELPDAPRF------------DVG-------PYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSD 160 (373)
T ss_pred EEECCCCcEEEEEECCCcccc------------ccC-------CCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEE
Confidence 99999887776654220 000 000 11235678888888887764 47899999 998887
Q ss_pred ee-ecCCCCceeEEEecCCCeEEEEeCC--CCeEEEEecCCcEEEEeCCCCc
Q psy7433 158 YN-FPGEHARSSFFKHIGQGVTQLHVDG--GSRLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 158 ~~-~~~~~~~~~~~~~~~~~v~~~~~~~--~~~l~s~~~d~~i~iw~~~~~~ 206 (213)
.. +.... . +.+.| ...+++.+.||.+.+++. +++
T Consensus 161 ~~~i~~~~-----------~---~~~~~~~~~~~~~~~~dg~~~~vd~-~g~ 197 (373)
T 2mad_H 161 DQLLSSPT-----------C---YHIHPGAPSTFYLLCAQGGLAKTDH-AGG 197 (373)
T ss_pred eEEcCCCc-----------e---EEEEeCCCceEEEEcCCCCEEEEEC-CCc
Confidence 77 65421 1 22333 234666777888888887 543
No 227
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.93 E-value=3.3e-06 Score=59.73 Aligned_cols=192 Identities=10% Similarity=0.118 Sum_probs=124.9
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeee-ecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVC-HDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
+.+-.+.+..++++|++..|.+.. ..++.|...|. . ++.++.+.- -......+++.+++.++++.-.++.+.+
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~--d~~~~I~~ld~---~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~ 95 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTI--NKPAAIVEMTT---N-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYV 95 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEE--ETTEEEEEEET---T-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEE
T ss_pred CCCcccCcceeEEeCCCCEEEEEE--CCCCeEEEEeC---C-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEE
Confidence 344456799999999876555543 46888888887 3 556666542 1246778899988877777667788999
Q ss_pred EeccCce---EEEecc------cCCCCeeEEEecCCCCEEEEecCCCce--e-------------------------ece
Q psy7433 82 IDLRQRV---IRSRFN------AHESPVKCLAIDPHEEFFVTGAGDGDI--K-------------------------SPV 125 (213)
Q Consensus 82 wd~~~~~---~~~~~~------~~~~~i~~~~~~~~~~~l~~~~~~~~i--~-------------------------~~v 125 (213)
+++.... .+.... ........++++|+++.|.++.+.... . ..+
T Consensus 96 ~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~ 175 (255)
T 3qqz_A 96 ISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDV 175 (255)
T ss_dssp EEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCC
T ss_pred EEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCc
Confidence 9876543 122221 123346899999998777766654331 1 356
Q ss_pred EEEEEccC-CceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeC
Q psy7433 126 KCLAIDPH-EEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQL 202 (213)
Q Consensus 126 ~~~~~~~~-~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~ 202 (213)
..++++|. +++++.......+.++|.+ ++.+..+........ ....-.....|++.+++.|+..+..+.++.+.-
T Consensus 176 S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~-l~~~~~qpEGia~d~~G~lyIvsE~n~~y~f~~ 251 (255)
T 3qqz_A 176 SGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRG-LSHNIKQAEGVAMDASGNIYIVSEPNRFYRFTP 251 (255)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGG-CSSCCCSEEEEEECTTCCEEEEETTTEEEEEEC
T ss_pred eeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCC-cccccCCCCeeEECCCCCEEEEcCCceEEEEEe
Confidence 78899986 4567777777889999965 445544443211000 000013678999999888888888887766653
No 228
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.92 E-value=6.4e-07 Score=63.20 Aligned_cols=174 Identities=13% Similarity=0.079 Sum_probs=111.0
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEc-CCCcEEEEeccCce
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG-KKGDICVIDLRQRV 88 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~iwd~~~~~ 88 (213)
...+.|+ ++.++.++|. .....|+++|+ .+++.+..+... .........+.++.|+... .++.+.+||..+.+
T Consensus 45 tqGL~~~-~~~LyestG~-~g~S~v~~vD~---~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~ 118 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGL-NGRSSIRKVDI---ESGKTLQQIELG-KRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLR 118 (262)
T ss_dssp EEEEEEE-TTEEEEEEEE-TTEEEEEEECT---TTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSEEEEEETTTCC
T ss_pred cceEEEE-CCEEEEECCC-CCCceEEEEEC---CCCcEEEEEecC-CccceeEEEEeCCEEEEEEeeCCEEEEEECccCc
Confidence 4778888 6777777742 11348999999 567777666543 3333333344455555544 57899999999999
Q ss_pred EEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------------eceEEEEEccCCceEEEecCCCcE
Q psy7433 89 IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------------SPVKCLAIDPHEEFFVTGAGDGDI 146 (213)
Q Consensus 89 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------------~~v~~~~~~~~~~~l~~~~~dg~i 146 (213)
.+.+++... .-..++ +++..|+.+..++.+. ..++.+.|. +|+..+..-.++.|
T Consensus 119 ~~~ti~~~~-eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I 194 (262)
T 3nol_A 119 QVRSFNYDG-EGWGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKI 194 (262)
T ss_dssp EEEEEECSS-CCCCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEE
T ss_pred EEEEEECCC-CceEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeE
Confidence 998887432 223444 5677777666555554 123346676 67766666568899
Q ss_pred EEEEccCCeeeeeecCCCCceeE--EEecCCCeEEEEeCCC-CeEEEEec
Q psy7433 147 KVWSLSGNHLLYNFPGEHARSSF--FKHIGQGVTQLHVDGG-SRLFSCGA 193 (213)
Q Consensus 147 ~v~d~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~-~~l~s~~~ 193 (213)
.+.|.++++.+..+......... ........+.++++|+ ++|+..+.
T Consensus 195 ~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 195 VRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 99999999998888764211100 0112356799999985 45555544
No 229
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.91 E-value=3.3e-07 Score=69.58 Aligned_cols=179 Identities=13% Similarity=0.077 Sum_probs=113.3
Q ss_pred eEEEEEeCCCCeEEEeec---cCCCccEEEEeCCCcccccceeeeeeecC---CceEEEEecCCCEEEEEc---------
Q psy7433 10 TSDFVFLGSCSLVATAGH---SSESKNVCLWDSLLPQKKALVQAFVCHDQ---GASSLVFAPQHQLLISAG--------- 74 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~---~s~~~~i~iwd~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~--------- 74 (213)
...+...|+| +++++.. +...+.|.+.|. .+.+.+..+..... --..+.|+|+++.+++..
T Consensus 140 Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~---~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~ 215 (462)
T 2ece_A 140 LHTVHCGPDA-IYISALGNEEGEGPGGILMLDH---YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIED 215 (462)
T ss_dssp EEEEEECSSC-EEEEEEEETTSCSCCEEEEECT---TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTT
T ss_pred ccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC---CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCcccccc
Confidence 3456778999 6665521 001268999998 56677777652222 134588899999988884
Q ss_pred ----------CCCcEEEEeccCceEEEecccCC--CCeeEEEe--cCCCCEEEEecC------CCcee------------
Q psy7433 75 ----------KKGDICVIDLRQRVIRSRFNAHE--SPVKCLAI--DPHEEFFVTGAG------DGDIK------------ 122 (213)
Q Consensus 75 ----------~d~~v~iwd~~~~~~~~~~~~~~--~~i~~~~~--~~~~~~l~~~~~------~~~i~------------ 122 (213)
.+..|.+||+.+++.+..+.... .....+.| +|+++++.++++ ++++.
T Consensus 216 g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~ 295 (462)
T 2ece_A 216 GLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAE 295 (462)
T ss_dssp CCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEE
T ss_pred ccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEE
Confidence 36899999999988888776431 23455655 999988777665 22221
Q ss_pred -------------------------eceEEEEEccCCceEEEecC-CCcEEEEEcc---CCeeeeeecCCCCc-eeEE--
Q psy7433 123 -------------------------SPVKCLAIDPHEEFFVTGAG-DGDIKVWSLS---GNHLLYNFPGEHAR-SSFF-- 170 (213)
Q Consensus 123 -------------------------~~v~~~~~~~~~~~l~~~~~-dg~i~v~d~~---~~~~~~~~~~~~~~-~~~~-- 170 (213)
..+..+.++|||++|.++.. .+.|.+||+. +.+.+..+...... ....
T Consensus 296 ~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~ 375 (462)
T 2ece_A 296 KVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPA 375 (462)
T ss_dssp EEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTT
T ss_pred EEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccc
Confidence 22577889999998877765 5799999985 23445444432100 0000
Q ss_pred -EecCCCeEEEEeCCCC-eEEEEe
Q psy7433 171 -KHIGQGVTQLHVDGGS-RLFSCG 192 (213)
Q Consensus 171 -~~~~~~v~~~~~~~~~-~l~s~~ 192 (213)
....+....+.++|++ +|+++.
T Consensus 376 G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 376 GHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp SCCCCSCCCCEEECTTSSEEEEEC
T ss_pred cccCCCCCCEEEEcCCCCEEEEEc
Confidence 0000135778899876 466655
No 230
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.85 E-value=1.9e-07 Score=75.67 Aligned_cols=179 Identities=11% Similarity=0.064 Sum_probs=103.7
Q ss_pred EEEEEeCCCCeEEEeeccCCC-------------ccEEEEeCCCcccc-cceeeeee-ecCCceEEEEecCCCEEEEEc-
Q psy7433 11 SDFVFLGSCSLVATAGHSSES-------------KNVCLWDSLLPQKK-ALVQAFVC-HDQGASSLVFAPQHQLLISAG- 74 (213)
Q Consensus 11 ~~~~~~~~~~~l~~~g~~s~~-------------~~i~iwd~~~~~~~-~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~- 74 (213)
..++|+ |++.|+.+ +.+ ..|++|++.++... ..+..... +......+.|+|+|++|+...
T Consensus 178 ~~~~Ws-Dg~~l~y~---~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~ 253 (693)
T 3iuj_A 178 SGISWL-GNEGFFYS---SYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAA 253 (693)
T ss_dssp CCCEEE-TTTEEEEE---ESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEE
T ss_pred ccEEEe-CCCEEEEE---EecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEc
Confidence 567899 99988887 344 34999998432211 12222222 334567899999999876433
Q ss_pred ---CCCcEEEEeccCce-EEEecccCCCCeeEEEecCCCCEEEEecC-C---Ccee-------------------eceEE
Q psy7433 75 ---KKGDICVIDLRQRV-IRSRFNAHESPVKCLAIDPHEEFFVTGAG-D---GDIK-------------------SPVKC 127 (213)
Q Consensus 75 ---~d~~v~iwd~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-~---~~i~-------------------~~v~~ 127 (213)
.+..|.++|+.++. ....+..+....... +++++..|+..+. + ..+. ..+.
T Consensus 254 ~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~- 331 (693)
T 3iuj_A 254 NSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL- 331 (693)
T ss_dssp SSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE-
T ss_pred cCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE-
Confidence 23589999997762 233444444444333 5555554443332 2 1221 1222
Q ss_pred EEEccCCceEEEecCC-C--cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecC----CcEEE
Q psy7433 128 LAIDPHEEFFVTGAGD-G--DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGAD----GSMKV 199 (213)
Q Consensus 128 ~~~~~~~~~l~~~~~d-g--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d----~~i~i 199 (213)
.|+++++.|+....+ + .|++||+..+. ...+..... ..+..+.+++++ .++....+ +.+..
T Consensus 332 -~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~-~~~l~~p~~---------~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~ 400 (693)
T 3iuj_A 332 -TVHSGSGYLFAEYMVDATARVEQFDYEGKR-VREVALPGL---------GSVSGFNGKHDDPALYFGFENYAQPPTLYR 400 (693)
T ss_dssp -EEEEETTEEEEEEEETTEEEEEEECTTSCE-EEEECCSSS---------SEEEECCCCTTCSCEEEEEECSSSCCEEEE
T ss_pred -EEEEECCEEEEEEEECCeeEEEEEECCCCe-eEEeecCCC---------ceEEeeecCCCCCEEEEEecCCCCCCEEEE
Confidence 788888877666544 3 68888887443 334432221 456667777643 34333332 78999
Q ss_pred EeCCCCc
Q psy7433 200 RQLPDRD 206 (213)
Q Consensus 200 w~~~~~~ 206 (213)
||+.+++
T Consensus 401 ~d~~~g~ 407 (693)
T 3iuj_A 401 FEPKSGA 407 (693)
T ss_dssp ECTTTCC
T ss_pred EECCCCe
Confidence 9987654
No 231
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.84 E-value=3.4e-06 Score=59.61 Aligned_cols=170 Identities=10% Similarity=0.013 Sum_probs=108.5
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEE-EEcCCCcEEEEeccCce
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLI-SAGKKGDICVIDLRQRV 88 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~iwd~~~~~ 88 (213)
...+.|+ ++.++.+. ..++.|+++|+ .+++.+..+ . ..........+.++.|+ ..-.++.+.+||..+.+
T Consensus 57 tqGL~~~-~~~Ly~st---G~~g~v~~iD~---~Tgkv~~~~-l-~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~ 127 (268)
T 3nok_A 57 TQGLVFH-QGHFFEST---GHQGTLRQLSL---ESAQPVWME-R-LGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQ 127 (268)
T ss_dssp EEEEEEE-TTEEEEEE---TTTTEEEECCS---SCSSCSEEE-E-CTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTE
T ss_pred cceEEEE-CCEEEEEc---CCCCEEEEEEC---CCCcEEeEE-C-CCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCc
Confidence 4678887 35666666 47888999999 566666665 2 23333322333444444 44468899999999999
Q ss_pred EEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------------eceEEEEEccCCceEEEecCCCcE
Q psy7433 89 IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------------SPVKCLAIDPHEEFFVTGAGDGDI 146 (213)
Q Consensus 89 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------------~~v~~~~~~~~~~~l~~~~~dg~i 146 (213)
.+.+++.. ..-+.++ ++++.|+.+..++.+. ..++.+.|. +|+..+..-.++.|
T Consensus 128 ~~~ti~~~-~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I 203 (268)
T 3nok_A 128 RERTTRYS-GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDV 203 (268)
T ss_dssp EEEEEECS-SCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEE
T ss_pred EEEEEeCC-CceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeE
Confidence 99988753 3334454 5577777776666554 234556666 67766666567899
Q ss_pred EEEEccCCeeeeeecCCCCceeE---EEecCCCeEEEEeCCC-CeEEEEe
Q psy7433 147 KVWSLSGNHLLYNFPGEHARSSF---FKHIGQGVTQLHVDGG-SRLFSCG 192 (213)
Q Consensus 147 ~v~d~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~-~~l~s~~ 192 (213)
.+.|.++++.+..+......... ........+.|+++|+ ++|+..+
T Consensus 204 ~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 204 LEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 99999999988877653110000 0111257899999984 4554444
No 232
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.79 E-value=1.1e-06 Score=66.82 Aligned_cols=121 Identities=10% Similarity=-0.035 Sum_probs=82.9
Q ss_pred CCCCeEEEeeccCCC----ccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEc----------CCCcEEEE
Q psy7433 17 GSCSLVATAGHSSES----KNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG----------KKGDICVI 82 (213)
Q Consensus 17 ~~~~~l~~~g~~s~~----~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~v~iw 82 (213)
|+++.++... ..+ +.|.++|. .+.+.+..+..-..+ .++++|++++++.+. .++.|.++
T Consensus 82 ~~~~~vyV~n--~~~~~~~~~VsVID~---~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~Vsvi 154 (426)
T 3c75_H 82 PDARRVYIQD--PAHFAAITQQFVIDG---STGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVF 154 (426)
T ss_dssp CCTTEEEEEE--CTTTCSSEEEEEEET---TTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCCEEEEEC--CCcCCCCCeEEEEEC---CCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEE
Confidence 3666555552 222 79999998 677788887755555 899999999888876 36789999
Q ss_pred eccCceEEEecccC-CCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEecC--CCcEEEEEccCCeeeee
Q psy7433 83 DLRQRVIRSRFNAH-ESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAG--DGDIKVWSLSGNHLLYN 159 (213)
Q Consensus 83 d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~~--dg~i~v~d~~~~~~~~~ 159 (213)
|..+++.+..+.-. ...... -.....+.|+|||+++++++. ++.|.+.|+.+.+.+..
T Consensus 155 D~~t~~vv~~I~v~g~~r~~~-------------------g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~ 215 (426)
T 3c75_H 155 DPVTFLPIADIELPDAPRFLV-------------------GTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRM 215 (426)
T ss_dssp CTTTCCEEEEEEETTCCCCCB-------------------SCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEE
T ss_pred ECCCCcEEEEEECCCcccccc-------------------CCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEE
Confidence 99999887776421 000000 001233556666676666653 57899999999998888
Q ss_pred ecCC
Q psy7433 160 FPGE 163 (213)
Q Consensus 160 ~~~~ 163 (213)
+...
T Consensus 216 I~v~ 219 (426)
T 3c75_H 216 LDVP 219 (426)
T ss_dssp EECC
T ss_pred EEcC
Confidence 8763
No 233
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.78 E-value=1.7e-06 Score=65.76 Aligned_cols=185 Identities=14% Similarity=0.134 Sum_probs=114.4
Q ss_pred CCCCeEEEeeccCCCccEEEEeCC-Ccccccceeeee-------eecCCceEEEEecCCCEEEEEcCC------CcEEEE
Q psy7433 17 GSCSLVATAGHSSESKNVCLWDSL-LPQKKALVQAFV-------CHDQGASSLVFAPQHQLLISAGKK------GDICVI 82 (213)
Q Consensus 17 ~~~~~l~~~g~~s~~~~i~iwd~~-~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d------~~v~iw 82 (213)
+++++|+..| -.++.|.++|+. .+...+..+.+. .....-..+...|+| +++++..+ +.|.++
T Consensus 93 ~~r~~l~v~~--l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vl 169 (462)
T 2ece_A 93 IERRFLIVPG--LRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILML 169 (462)
T ss_dssp CCSCEEEEEB--TTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEE
T ss_pred ccCCEEEEcc--CCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEE
Confidence 7788888776 578999999984 223334444442 011134567788999 77766554 789999
Q ss_pred eccCceEEEecccCCC---CeeEEEecCCCCEEEEecC-------------------CCcee------------------
Q psy7433 83 DLRQRVIRSRFNAHES---PVKCLAIDPHEEFFVTGAG-------------------DGDIK------------------ 122 (213)
Q Consensus 83 d~~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~~~~~-------------------~~~i~------------------ 122 (213)
|.++++.+..+..... .-..+.|+|+++.+++... ...+.
T Consensus 170 D~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~ 249 (462)
T 2ece_A 170 DHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE 249 (462)
T ss_dssp CTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT
T ss_pred ECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC
Confidence 9999999988863322 2346888999998888751 22222
Q ss_pred -eceEEEEE--ccCCceEEEecC------CCcEEEEEccCCee--eeeecCCCCce-eE-------EEecCCCeEEEEeC
Q psy7433 123 -SPVKCLAI--DPHEEFFVTGAG------DGDIKVWSLSGNHL--LYNFPGEHARS-SF-------FKHIGQGVTQLHVD 183 (213)
Q Consensus 123 -~~v~~~~~--~~~~~~l~~~~~------dg~i~v~d~~~~~~--~~~~~~~~~~~-~~-------~~~~~~~v~~~~~~ 183 (213)
.....+.| +|+++++.++++ ++.|.+|....++. ...+....... .. +...+.....+.++
T Consensus 250 g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS 329 (462)
T 2ece_A 250 NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDIS 329 (462)
T ss_dssp EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEEC
T ss_pred CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEEC
Confidence 12344545 999998777764 56888777654321 11111000000 00 00002457788999
Q ss_pred CCCe-E-EEEecCCcEEEEeCCC
Q psy7433 184 GGSR-L-FSCGADGSMKVRQLPD 204 (213)
Q Consensus 184 ~~~~-l-~s~~~d~~i~iw~~~~ 204 (213)
++++ | ++.-..+.|.+||+..
T Consensus 330 ~DGrfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 330 LDDKFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp TTSCEEEEEETTTTEEEEEECSS
T ss_pred CCCCEEEEEeCCCCEEEEEEecC
Confidence 9775 3 4445678999999963
No 234
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.76 E-value=1e-06 Score=64.55 Aligned_cols=160 Identities=9% Similarity=0.094 Sum_probs=102.9
Q ss_pred CeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCC
Q psy7433 20 SLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESP 99 (213)
Q Consensus 20 ~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~ 99 (213)
..+..+ +.++.|..+|. . ++...........+.++...+++. ++.++.++.|..+|.. ++....+......
T Consensus 108 ~~l~v~---t~~~~l~~~d~---~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~ 178 (330)
T 3hxj_A 108 DILYVT---SMDGHLYAINT---D-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAI 178 (330)
T ss_dssp TEEEEE---CTTSEEEEECT---T-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCC
T ss_pred CEEEEE---ecCCEEEEEcC---C-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCc
Confidence 344444 46888999997 3 444444444445566677776776 6667778999999998 7766666555556
Q ss_pred eeEEEecCCCCEEEEecCCCcee---------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCC
Q psy7433 100 VKCLAIDPHEEFFVTGAGDGDIK---------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEH 164 (213)
Q Consensus 100 i~~~~~~~~~~~l~~~~~~~~i~---------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~ 164 (213)
+.++...+++..++.. .+... ..+.++..++++. +..++.++.+..+|. +++.+..+....
T Consensus 179 ~~~~~~d~~g~l~v~t--~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~ 254 (330)
T 3hxj_A 179 TSAASIGKDGTIYFGS--DKVYAINPDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKTGK 254 (330)
T ss_dssp CSCCEECTTCCEEEES--SSEEEECTTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEECSS
T ss_pred eeeeEEcCCCEEEEEe--CEEEEECCCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeCCC
Confidence 7777777777655443 32221 3366777777765 555666778888874 555555554332
Q ss_pred CceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeC
Q psy7433 165 ARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQL 202 (213)
Q Consensus 165 ~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~ 202 (213)
..+..+...+++.|..++.+|.+..+|.
T Consensus 255 ----------~~~~~~~~~~~g~l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 255 ----------RIESSPVIGNTDTIYFGSYDGHLYAINP 282 (330)
T ss_dssp ----------CCCSCCEECTTSCEEEECTTCEEEEECT
T ss_pred ----------CccccceEcCCCeEEEecCCCCEEEECC
Confidence 2233345566778888888988999985
No 235
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.75 E-value=1.6e-06 Score=70.20 Aligned_cols=178 Identities=15% Similarity=0.137 Sum_probs=103.0
Q ss_pred EEEEeCCCCeEEEeeccCCCc-------------------cEEEEeCCCcccccceeeeeeec---------CCceEEEE
Q psy7433 12 DFVFLGSCSLVATAGHSSESK-------------------NVCLWDSLLPQKKALVQAFVCHD---------QGASSLVF 63 (213)
Q Consensus 12 ~~~~~~~~~~l~~~g~~s~~~-------------------~i~iwd~~~~~~~~~~~~~~~~~---------~~v~~~~~ 63 (213)
.++++|++.+++.+ +.++ .|..+|. .+++.+..++... .+......
T Consensus 239 ~~~~d~~~~~vy~~---~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~---~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~ 312 (689)
T 1yiq_A 239 SFAYDPELNLLYIG---VGNGSLWDPKWRSQAKGDNLFLSSIVAVNA---DTGEYVWHYQTTPGDAWDYTATQHMILAEL 312 (689)
T ss_dssp CEEEETTTTEEEEE---CCCEESSCHHHHHTTCSCCTTTTEEEEEET---TTCCEEEEEESSTTCCSCCCCCSCEEEEEE
T ss_pred ceeEcCCCCEEEEe---CCCCCccccCCCCCCCCCceeeeeEEEEEc---cCCceeEeeecCCcccccccCCCCcEEEee
Confidence 57888988888877 4555 3999998 5666666655321 11112222
Q ss_pred ecCCC---EEEEEcCCCcEEEEeccCceEEEecccCCC-CeeEEEe--------------cCCCC-EEEEecCCCceeec
Q psy7433 64 APQHQ---LLISAGKKGDICVIDLRQRVIRSRFNAHES-PVKCLAI--------------DPHEE-FFVTGAGDGDIKSP 124 (213)
Q Consensus 64 ~~~~~---~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~-~i~~~~~--------------~~~~~-~l~~~~~~~~i~~~ 124 (213)
..+|+ .++.++.+|.++++|.++++.+...+.... ....+.. -++++ .++.-+..|- ..
T Consensus 313 ~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg--~~ 390 (689)
T 1yiq_A 313 PIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGA--HD 390 (689)
T ss_dssp EETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCS--SC
T ss_pred ccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccc--cC
Confidence 23554 788999999999999999988754432110 0111100 01110 1111110000 01
Q ss_pred eEEEEEccCCceEEEec---------------------------------------------CCCcEEEEEccCCeeeee
Q psy7433 125 VKCLAIDPHEEFFVTGA---------------------------------------------GDGDIKVWSLSGNHLLYN 159 (213)
Q Consensus 125 v~~~~~~~~~~~l~~~~---------------------------------------------~dg~i~v~d~~~~~~~~~ 159 (213)
...++|+|+..++++.. .+|.|..||+++++.+-.
T Consensus 391 w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~ 470 (689)
T 1yiq_A 391 WQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWE 470 (689)
T ss_dssp SSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEE
T ss_pred CCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeE
Confidence 12244444444333321 147899999999998877
Q ss_pred ecCCCCceeEEEecCCCeEEEEe-CCCCeEEEEecCCcEEEEeCCCCccc
Q psy7433 160 FPGEHARSSFFKHIGQGVTQLHV-DGGSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 160 ~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
.+.+. +...-.+ ..++.++.++.||.++.||..+++.+
T Consensus 471 ~~~~~-----------~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~l 509 (689)
T 1yiq_A 471 VPYVT-----------IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKL 509 (689)
T ss_dssp EEESS-----------SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred ccCCC-----------CccCccceECCCEEEEECCCCcEEEEECCCCccc
Confidence 76543 1221122 24678899999999999999998764
No 236
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.74 E-value=9.1e-06 Score=56.84 Aligned_cols=175 Identities=15% Similarity=0.116 Sum_probs=109.6
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEE-EcCCCcEEEEeccCc
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLIS-AGKKGDICVIDLRQR 87 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~v~iwd~~~~ 87 (213)
-...+.|++ +.++.++|. .....|+.+|+ .+++.+..+.... ........+.++.|+. .-.++.+.+||..+.
T Consensus 22 ftqGL~~~~-~~LyestG~-~g~S~v~~vD~---~tgkv~~~~~l~~-~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl 95 (243)
T 3mbr_X 22 FTEGLFYLR-GHLYESTGE-TGRSSVRKVDL---ETGRILQRAEVPP-PYFGAGIVAWRDRLIQLTWRNHEGFVYDLATL 95 (243)
T ss_dssp CEEEEEEET-TEEEEEECC-TTSCEEEEEET---TTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEETTTT
T ss_pred ccccEEEEC-CEEEEECCC-CCCceEEEEEC---CCCCEEEEEeCCC-CcceeEEEEeCCEEEEEEeeCCEEEEEECCcC
Confidence 366889986 666676642 12358999999 5677776665332 2333333333445544 446889999999999
Q ss_pred eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------------eceEEEEEccCCceEEEecCCCc
Q psy7433 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------------SPVKCLAIDPHEEFFVTGAGDGD 145 (213)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------------~~v~~~~~~~~~~~l~~~~~dg~ 145 (213)
+.+.+++... .-+.++ +++..|+++..++.+. ..++.+.|. +|+.++..-.+..
T Consensus 96 ~~~~ti~~~~-~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~ 171 (243)
T 3mbr_X 96 TPRARFRYPG-EGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSR 171 (243)
T ss_dssp EEEEEEECSS-CCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTE
T ss_pred cEEEEEeCCC-CceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCe
Confidence 9999887533 334454 5566666666566654 233445554 6666666656789
Q ss_pred EEEEEccCCeeeeeecCCCCceeE-E--EecCCCeEEEEeCCC-CeEEEEec
Q psy7433 146 IKVWSLSGNHLLYNFPGEHARSSF-F--KHIGQGVTQLHVDGG-SRLFSCGA 193 (213)
Q Consensus 146 i~v~d~~~~~~~~~~~~~~~~~~~-~--~~~~~~v~~~~~~~~-~~l~s~~~ 193 (213)
|.+.|.++++.+..+......... . .......+.++++|+ ++|+..+.
T Consensus 172 I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 172 IARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 999999999988887643211000 0 112357899999984 45554443
No 237
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.74 E-value=1.9e-09 Score=80.89 Aligned_cols=142 Identities=11% Similarity=0.012 Sum_probs=68.5
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecC-Cce-EEEEecCCCEEEEEcCCCcEEEEeccCc
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQ-GAS-SLVFAPQHQLLISAGKKGDICVIDLRQR 87 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~-~v~-~~~~~~~~~~l~~~~~d~~v~iwd~~~~ 87 (213)
+.+..+.+++..++++ +.|+.|+.||. .+++.+..+..+.. .+. +..+. .+..+++++.++.++.||.++|
T Consensus 40 ~~s~p~~~~g~~~v~~---s~dg~l~a~d~---~tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG 112 (369)
T 2hz6_A 40 VLQVPTHVEEPAFLPD---PNDGSLYTLGS---KNNEGLTKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTG 112 (369)
T ss_dssp SCCCC-----CCEEEC---TTTCCEEEC--------CCSEECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC--
T ss_pred ceecceEcCCCEEEEe---CCCCEEEEEEC---CCCceeeeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCCC
Confidence 3333344567777776 68999999998 44544444332211 111 11111 3456788888999999999999
Q ss_pred eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee---------------eceEEEEEccCC---ceEEEecCCCcEEEE
Q psy7433 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------SPVKCLAIDPHE---EFFVTGAGDGDIKVW 149 (213)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------~~v~~~~~~~~~---~~l~~~~~dg~i~v~ 149 (213)
+.+..+..+. ...++|++..+++++.++.+. .......++++. ..+++++.+|.+..|
T Consensus 113 ~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~dg~v~a~ 188 (369)
T 2hz6_A 113 EKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFDYAASLPEDDVDYKMSHFVSNGDGLVVTV 188 (369)
T ss_dssp ------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEEECCBCCCCCTTCCCCEEEEETSCEEEEE
T ss_pred cEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEecccccCccccCCccccceEEEECCCCEEEEE
Confidence 8877765433 234566777888887777665 111222333322 567778899999999
Q ss_pred EccCCeeeeeecC
Q psy7433 150 SLSGNHLLYNFPG 162 (213)
Q Consensus 150 d~~~~~~~~~~~~ 162 (213)
|.++++.+.....
T Consensus 189 d~~tG~~~W~~~~ 201 (369)
T 2hz6_A 189 DSESGDVLWIQNY 201 (369)
T ss_dssp CTTTCCEEEEEEC
T ss_pred ECCCCcEEEEecC
Confidence 9999988777664
No 238
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.70 E-value=1.7e-06 Score=69.96 Aligned_cols=139 Identities=13% Similarity=0.233 Sum_probs=92.1
Q ss_pred eEEEEecCCCEEEEEcCCC-------------------cEEEEeccCceEEEecccCC---------CCeeEEEecCCC-
Q psy7433 59 SSLVFAPQHQLLISAGKKG-------------------DICVIDLRQRVIRSRFNAHE---------SPVKCLAIDPHE- 109 (213)
Q Consensus 59 ~~~~~~~~~~~l~~~~~d~-------------------~v~iwd~~~~~~~~~~~~~~---------~~i~~~~~~~~~- 109 (213)
..++++|++.+++.+..++ .|..+|.++++.+-.++... ....-+....++
T Consensus 246 ~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~ 325 (677)
T 1kb0_A 246 DSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGK 325 (677)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTE
T ss_pred cceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCc
Confidence 3578899888888887664 49999999998887665321 111222222355
Q ss_pred --CEEEEecCCCcee---------------ec-------------e------------------------EEEEEccCCc
Q psy7433 110 --EFFVTGAGDGDIK---------------SP-------------V------------------------KCLAIDPHEE 135 (213)
Q Consensus 110 --~~l~~~~~~~~i~---------------~~-------------v------------------------~~~~~~~~~~ 135 (213)
..++.++.++.+. .+ + ..++++|++.
T Consensus 326 ~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~ 405 (677)
T 1kb0_A 326 PRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTG 405 (677)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTT
T ss_pred EeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCC
Confidence 4666677666554 00 0 1468888888
Q ss_pred eEEEecC-------------------------------------------CCcEEEEEccCCeeeeeecCCCCceeEEEe
Q psy7433 136 FFVTGAG-------------------------------------------DGDIKVWSLSGNHLLYNFPGEHARSSFFKH 172 (213)
Q Consensus 136 ~l~~~~~-------------------------------------------dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~ 172 (213)
++++... .|.|..||+.+++.+-.+....
T Consensus 406 ~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-------- 477 (677)
T 1kb0_A 406 LVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVS-------- 477 (677)
T ss_dssp EEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESS--------
T ss_pred EEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCC--------
Confidence 7766532 2679999999999877765432
Q ss_pred cCCCeEEEEeC-CCCeEEEEecCCcEEEEeCCCCccc
Q psy7433 173 IGQGVTQLHVD-GGSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 173 ~~~~v~~~~~~-~~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
++....+. .++.++.++.||.+++||..+++.+
T Consensus 478 ---~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~l 511 (677)
T 1kb0_A 478 ---PWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKL 511 (677)
T ss_dssp ---SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred ---CCcCcceEeCCCEEEEECCCCcEEEEECCCCcee
Confidence 22222232 4668888899999999999998654
No 239
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.67 E-value=4.3e-05 Score=56.80 Aligned_cols=183 Identities=14% Similarity=0.000 Sum_probs=107.2
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCC-EEEEEcCCCcEEEEeccC
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQ-LLISAGKKGDICVIDLRQ 86 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~ 86 (213)
..+..++|++.+..|..+. ...+.|..++++ .......+.........+++.+.+. +.++-...+.|.+.++..
T Consensus 73 ~~~~~l~~d~~~~~ly~~D--~~~~~I~r~~~~---g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG 147 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSD--VTLDRILRANLN---GSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDG 147 (349)
T ss_dssp SCEEEEEEETTTTEEEEEE--TTTTEEEEEETT---SCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CceEEEEEeccccEEEEEe--ccCCceEEEecC---CCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCC
Confidence 3467889997655555442 467889889873 2222222222224467899998554 445555667899999875
Q ss_pred ceEEEecccCCCCeeEEEecCCCCEEEEec-CC-Ccee-----------------eceEEEEEccCCceEEEe-cCCCcE
Q psy7433 87 RVIRSRFNAHESPVKCLAIDPHEEFFVTGA-GD-GDIK-----------------SPVKCLAIDPHEEFFVTG-AGDGDI 146 (213)
Q Consensus 87 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~~-~~i~-----------------~~v~~~~~~~~~~~l~~~-~~dg~i 146 (213)
......+.........++++|.+..+.... .. +.|. .....++++|++..|..+ ...+.|
T Consensus 148 ~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I 227 (349)
T 3v64_C 148 AHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVI 227 (349)
T ss_dssp CSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEE
Confidence 543333333345678999998555444333 33 3332 457889999866655444 556789
Q ss_pred EEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCC
Q psy7433 147 KVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 147 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 205 (213)
..+|+........+.... .....+++..+..+.+-...+.|..++..++
T Consensus 228 ~~~~~dG~~~~~~~~~~~----------~~P~giav~~~~ly~td~~~~~V~~~~~~~G 276 (349)
T 3v64_C 228 ERANLDGSHRKAVISQGL----------PHPFAITVFEDSLYWTDWHTKSINSANKFTG 276 (349)
T ss_dssp EEEETTSCSCEEEECSSC----------SSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred EEEeCCCCceEEEEeCCC----------CCceEEEEECCEEEEecCCCCeEEEEEccCC
Confidence 999986432222222111 3456677744444555556677777774443
No 240
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.64 E-value=1.8e-05 Score=62.27 Aligned_cols=152 Identities=9% Similarity=0.059 Sum_probs=105.0
Q ss_pred CceEEEEE-e-CCCCeEEEeec---------------cCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEE
Q psy7433 8 KITSDFVF-L-GSCSLVATAGH---------------SSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLL 70 (213)
Q Consensus 8 ~~v~~~~~-~-~~~~~l~~~g~---------------~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 70 (213)
..+..+++ . |++.++.+++. ...++.+.+.|. .+.+.+.++.-.. ....++++|+|+++
T Consensus 134 ~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~---~t~~v~~qI~Vgg-~pd~~~~spdGk~~ 209 (595)
T 1fwx_A 134 KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDA---DKWEVAWQVLVSG-NLDNCDADYEGKWA 209 (595)
T ss_dssp CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEET---TTTEEEEEEEESS-CCCCEEECSSSSEE
T ss_pred CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEEC---CCCeEEEEEEeCC-CccceEECCCCCEE
Confidence 44677887 4 89998887731 023468899998 4566666665322 45678899999999
Q ss_pred EEEcCCC--------------------------------------cEEEEeccC--ceE-EEecccCCCCeeEEEecCCC
Q psy7433 71 ISAGKKG--------------------------------------DICVIDLRQ--RVI-RSRFNAHESPVKCLAIDPHE 109 (213)
Q Consensus 71 ~~~~~d~--------------------------------------~v~iwd~~~--~~~-~~~~~~~~~~i~~~~~~~~~ 109 (213)
++.+.+. .|.+.|.++ ++. +..++. .....++.++|||
T Consensus 210 ~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDG 288 (595)
T 1fwx_A 210 FSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDK 288 (595)
T ss_dssp EEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTS
T ss_pred EEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCC
Confidence 8887543 366677766 433 344432 3456789999999
Q ss_pred CEEEEecC-CCcee----------------------------eceEEEEEccCCceEEEecCCCcEEEEEccC-------
Q psy7433 110 EFFVTGAG-DGDIK----------------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSG------- 153 (213)
Q Consensus 110 ~~l~~~~~-~~~i~----------------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~------- 153 (213)
+++++++. +..+. .....++|+|+|...++.-.|+.|.+||+.+
T Consensus 289 k~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g 368 (595)
T 1fwx_A 289 KHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAG 368 (595)
T ss_dssp SEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHT
T ss_pred CEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcc
Confidence 98877664 33332 4678899999995555666789999999976
Q ss_pred ---CeeeeeecCCC
Q psy7433 154 ---NHLLYNFPGEH 164 (213)
Q Consensus 154 ---~~~~~~~~~~~ 164 (213)
...+.++..+.
T Consensus 369 ~~~~~vi~kidV~y 382 (595)
T 1fwx_A 369 EKVDPIKDKLDVHY 382 (595)
T ss_dssp CSCCCEEEEEECSS
T ss_pred cccceeEEEeeccc
Confidence 45666666654
No 241
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.63 E-value=4e-05 Score=54.55 Aligned_cols=148 Identities=8% Similarity=-0.055 Sum_probs=90.4
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee-eecCCceEEEEecCCCEEEEEcC---CCcEEEEe
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV-CHDQGASSLVFAPQHQLLISAGK---KGDICVID 83 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~---d~~v~iwd 83 (213)
.....++++|++..|..+. ...+.|.+++.+. .....+. ........++++|++..|+.+.. .+.|..++
T Consensus 79 ~~p~~ia~d~~~~~lyv~d--~~~~~I~~~~~~g----~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~ 152 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTD--SQLDRIEVAKMDG----TQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSH 152 (267)
T ss_dssp CCEEEEEEETTTTEEEEEE--TTTTEEEEEETTS----CSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEE
T ss_pred CCccEEEEEecCCeEEEEE--CCCCEEEEEEcCC----CCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEe
Confidence 4678899999755554442 4678899999741 1112221 12245689999997666655543 36788888
Q ss_pred ccCceEEEecccCCCCeeEEEecCCCCEEEEec-CCCcee----------------eceEEEEEccCCceEEEecCCCcE
Q psy7433 84 LRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGA-GDGDIK----------------SPVKCLAIDPHEEFFVTGAGDGDI 146 (213)
Q Consensus 84 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~~~~i~----------------~~v~~~~~~~~~~~l~~~~~dg~i 146 (213)
+..................++++|++..|..+. ..+.+. .....++.. .+.++++....+.|
T Consensus 153 ~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d-~~~lyva~~~~~~v 231 (267)
T 1npe_A 153 MDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSY-GKNLYYTDWKTNSV 231 (267)
T ss_dssp TTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEE-TTEEEEEETTTTEE
T ss_pred cCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEe-CCEEEEEECCCCeE
Confidence 764322111222334578999999876655444 444443 233455544 33444444456899
Q ss_pred EEEEccCCeeeeeecC
Q psy7433 147 KVWSLSGNHLLYNFPG 162 (213)
Q Consensus 147 ~v~d~~~~~~~~~~~~ 162 (213)
.++|..+++.+..+..
T Consensus 232 ~~~d~~~g~~~~~i~~ 247 (267)
T 1npe_A 232 IAMDLAISKEMDTFHP 247 (267)
T ss_dssp EEEETTTTEEEEEECC
T ss_pred EEEeCCCCCceEEEcc
Confidence 9999988888887764
No 242
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.60 E-value=7.1e-05 Score=56.42 Aligned_cols=183 Identities=13% Similarity=-0.011 Sum_probs=107.5
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEE-EEEcCCCcEEEEeccC
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLL-ISAGKKGDICVIDLRQ 86 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v~iwd~~~ 86 (213)
..+..++|.+.+..|..+. ...+.|..++.+ .......+.........+++.+.+..| ++-...+.|.+.++..
T Consensus 116 ~~~~gl~~d~~~~~ly~~D--~~~~~I~r~~~~---g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg 190 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSD--VTLDRILRANLN---GSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDG 190 (386)
T ss_dssp SCEEEEEEETTTTEEEEEE--TTTTEEEEEETT---SCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTS
T ss_pred CccEEEEEecCCCeEEEEe--CCCCcEEEEecC---CCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCC
Confidence 4567899997555554442 467889999873 222212222222345778998755444 4555567888888765
Q ss_pred ceEEEecccCCCCeeEEEecCCCCEEEEecC-C-Ccee-----------------eceEEEEEccCCceEE-EecCCCcE
Q psy7433 87 RVIRSRFNAHESPVKCLAIDPHEEFFVTGAG-D-GDIK-----------------SPVKCLAIDPHEEFFV-TGAGDGDI 146 (213)
Q Consensus 87 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-~-~~i~-----------------~~v~~~~~~~~~~~l~-~~~~dg~i 146 (213)
......+.........++++|.+..|..+.. . +.|. .....++|+|++..|. +-+..+.|
T Consensus 191 ~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I 270 (386)
T 3v65_B 191 AHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVI 270 (386)
T ss_dssp CSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEE
T ss_pred CceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEE
Confidence 4433333333456788999986655444432 2 3332 3468899998666444 44556789
Q ss_pred EEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCC
Q psy7433 147 KVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 147 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 205 (213)
..+|+........+.... .....+++..+..+.+-...+.|..++..++
T Consensus 271 ~~~d~dG~~~~~~~~~~~----------~~P~giav~~~~ly~td~~~~~V~~~~~~~G 319 (386)
T 3v65_B 271 ERANLDGSHRKAVISQGL----------PHPFAITVFEDSLYWTDWHTKSINSANKFTG 319 (386)
T ss_dssp EEECTTSCSCEEEECSSC----------SSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred EEEeCCCCeeEEEEECCC----------CCceEEEEECCEEEEeeCCCCeEEEEECCCC
Confidence 999875432222222111 3566777754544566666778888875444
No 243
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.59 E-value=2.7e-05 Score=57.03 Aligned_cols=182 Identities=10% Similarity=0.035 Sum_probs=106.9
Q ss_pred CceEEEEEeC-CCCeEEEeeccCCCccEEEEeCCCcccccceeeeee-----ecCCceEEEEec-CCCEEEEEcC-----
Q psy7433 8 KITSDFVFLG-SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVC-----HDQGASSLVFAP-QHQLLISAGK----- 75 (213)
Q Consensus 8 ~~v~~~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~l~~~~~----- 75 (213)
..+..+++.+ +++++++. ..+.|..+|.. ... +..+.. .......+++.+ +|++.++-..
T Consensus 80 ~~p~gi~~~~~~g~l~v~d----~~~~i~~~d~~---~g~-~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~ 151 (322)
T 2fp8_A 80 GRTYDISYNLQNNQLYIVD----CYYHLSVVGSE---GGH-ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDD 151 (322)
T ss_dssp CCEEEEEEETTTTEEEEEE----TTTEEEEECTT---CEE-CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCT
T ss_pred CCCceEEEcCCCCcEEEEE----CCCCEEEEeCC---CCE-EEEecccCCCCcccccceEEEecCCCEEEEECCcccccc
Confidence 3578899998 77766664 33448888863 221 112211 123467899999 8986665432
Q ss_pred ------------CCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEe-cCCCcee------------------ec
Q psy7433 76 ------------KGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTG-AGDGDIK------------------SP 124 (213)
Q Consensus 76 ------------d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~~~~i~------------------~~ 124 (213)
++.|..+|..+++...... .......++++|+++.+.++ ..++.|. ..
T Consensus 152 ~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g 230 (322)
T 2fp8_A 152 RGVQQIMDTSDKTGRLIKYDPSTKETTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN 230 (322)
T ss_dssp TCHHHHHHHTCCCEEEEEEETTTTEEEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS
T ss_pred cccceehcccCCCceEEEEeCCCCEEEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC
Confidence 3678888887665432222 12335679999998865554 3334442 01
Q ss_pred eEEEEEccCCceEEEecC----------CCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeE-EEEec
Q psy7433 125 VKCLAIDPHEEFFVTGAG----------DGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRL-FSCGA 193 (213)
Q Consensus 125 v~~~~~~~~~~~l~~~~~----------dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l-~s~~~ 193 (213)
...++++++|++.++... .+.|..+|. .++.+..+....... ...++.+.+. ++.| ++...
T Consensus 231 P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~------~~~~~~~~~~-~g~L~v~~~~ 302 (322)
T 2fp8_A 231 PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFA------GEHFEQIQEH-DGLLYIGTLF 302 (322)
T ss_dssp EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTT------TSCCCEEEEE-TTEEEEECSS
T ss_pred CCCeEECCCCCEEEEecCcccccccCCCccEEEEECC-CCCEEEEEECCCCCc------cccceEEEEe-CCEEEEeecC
Confidence 567888899886665544 456778876 466665555432100 0345666664 4554 45556
Q ss_pred CCcEEEEeCCCCc
Q psy7433 194 DGSMKVRQLPDRD 206 (213)
Q Consensus 194 d~~i~iw~~~~~~ 206 (213)
.+.|..+++....
T Consensus 303 ~~~i~~~~~~~~~ 315 (322)
T 2fp8_A 303 HGSVGILVYDKKG 315 (322)
T ss_dssp CSEEEEEEC----
T ss_pred CCceEEEeccccc
Confidence 7889999987543
No 244
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.57 E-value=2e-06 Score=64.34 Aligned_cols=157 Identities=10% Similarity=-0.046 Sum_probs=103.0
Q ss_pred cEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEc----------CCCcEEEEeccCceEEEecccC------
Q psy7433 33 NVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG----------KKGDICVIDLRQRVIRSRFNAH------ 96 (213)
Q Consensus 33 ~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~v~iwd~~~~~~~~~~~~~------ 96 (213)
.|.+.|. .+.+.+.++.....+ .+.++|++++++.+. .++.|.+||+.+++.+..+...
T Consensus 47 ~vsvID~---~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~ 121 (368)
T 1mda_H 47 ENWVSCA---GCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFS 121 (368)
T ss_dssp EEEEEET---TTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCC
T ss_pred eEEEEEC---CCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccc
Confidence 8889998 677888888766565 799999999998886 3688999999999998887633
Q ss_pred -CCCeeEEEecCCCCEEEEecCC--Cceee------ceEEEE------EccCCc-eEEEecCCCcEEEEEccC-----Ce
Q psy7433 97 -ESPVKCLAIDPHEEFFVTGAGD--GDIKS------PVKCLA------IDPHEE-FFVTGAGDGDIKVWSLSG-----NH 155 (213)
Q Consensus 97 -~~~i~~~~~~~~~~~l~~~~~~--~~i~~------~v~~~~------~~~~~~-~l~~~~~dg~i~v~d~~~-----~~ 155 (213)
......++++|++++++++... ..+.. .+..+. +.|+++ .+++.+.||.+.+.|+.+ ++
T Consensus 122 ~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~ 201 (368)
T 1mda_H 122 VGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGI 201 (368)
T ss_dssp BSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEE
T ss_pred cCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhhceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCe
Confidence 1346789999999999988643 22221 122222 245443 455667788888889876 43
Q ss_pred eeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCC
Q psy7433 156 LLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~ 204 (213)
....... .. .....+. ...+++.++..+. +.+.+.|...
T Consensus 202 v~~~~t~-~i-----~vg~~P~---~~~~~~~~~~vs~-~~V~viD~~~ 240 (368)
T 1mda_H 202 VGAQCTG-AQ-----NCSSQAA---QANYPGMLVWAVA-SSILQGDIPA 240 (368)
T ss_dssp CCCCSCT-TS-----CBCSCCE---EETTTTEEEECBS-SCCEEEECCS
T ss_pred EEEEeee-ee-----eCCCCcc---ccccCCEEEEEcC-CEEEEEECCC
Confidence 3221100 00 0001233 2444556555556 8888888864
No 245
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.57 E-value=7.7e-05 Score=54.62 Aligned_cols=189 Identities=11% Similarity=0.017 Sum_probs=108.2
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceee-eeeecCCceEEEEecCCCEE-EEEcCCCcEEEEecc
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQA-FVCHDQGASSLVFAPQHQLL-ISAGKKGDICVIDLR 85 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v~iwd~~ 85 (213)
..+.+++|++.+..|..+. ..++.|..++++.......... +.........+++++.+..| ++-...+.|.+.++.
T Consensus 30 ~~p~g~~~d~~~~~ly~~D--~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~ 107 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSD--LSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 107 (316)
T ss_dssp SSEEEEEEETTTTEEEEEE--TTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CceEEEEEEeCCCEEEEEE--CCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCC
Confidence 4467899998665555442 4678999999742100111122 22222456789998755444 454667889999987
Q ss_pred CceEEEecccCCCCeeEEEecCCCCEEEEecCC--Ccee-----------------eceEEEEEccCCceEEEe-cCCCc
Q psy7433 86 QRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD--GDIK-----------------SPVKCLAIDPHEEFFVTG-AGDGD 145 (213)
Q Consensus 86 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~--~~i~-----------------~~v~~~~~~~~~~~l~~~-~~dg~ 145 (213)
.......+.........++++|.+..+..+... +.|. .....++++|++..|..+ +..+.
T Consensus 108 g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~ 187 (316)
T 1ijq_A 108 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 187 (316)
T ss_dssp SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCe
Confidence 544333333334567899999865544433322 3342 356789999876655544 45678
Q ss_pred EEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCc
Q psy7433 146 IKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 146 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 206 (213)
|..+|+.............. ......+++..+..+.+-...+.|..++..+++
T Consensus 188 I~~~d~dg~~~~~~~~~~~~--------~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 188 ISSIDVNGGNRKTILEDEKR--------LAHPFSLAVFEDKVFWTDIINEAIFSANRLTGS 240 (316)
T ss_dssp EEEEETTSCSCEEEEECTTT--------TSSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred EEEEecCCCceEEEeecCCc--------cCCcEEEEEECCEEEEEECCCCeEEEEeCCCCc
Confidence 99999863222111111110 134567777644445555566788888865543
No 246
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.57 E-value=3.7e-05 Score=56.29 Aligned_cols=138 Identities=11% Similarity=0.075 Sum_probs=86.3
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeee--------------------ecCCceEEEEec-C
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVC--------------------HDQGASSLVFAP-Q 66 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~--------------------~~~~v~~~~~~~-~ 66 (213)
....+++|.++++++.++ ..++.|..|+.+ .. .+..+.. .......+++.+ +
T Consensus 19 ~~p~~i~~d~~g~~l~v~---~~~~~i~~~~~~---~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~ 91 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTS---VQDGRVIKYEGP---NS-GFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQN 91 (322)
T ss_dssp SCCCCEECCTTCSSEEEE---CTTSEEEEECCT---TT-CEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTT
T ss_pred CCceEEEEcCCCCEEEEE---cCCCeEEEECCC---CC-ceEEEecccccccccccccccchhccccCCCCceEEEcCCC
Confidence 346778899999867776 578999999863 21 1222211 123468899998 6
Q ss_pred CCEEEEEcCCCcEEEEeccCceEEEecc---c-CCCCeeEEEecC-CCCEEEEecC-----------------CCcee--
Q psy7433 67 HQLLISAGKKGDICVIDLRQRVIRSRFN---A-HESPVKCLAIDP-HEEFFVTGAG-----------------DGDIK-- 122 (213)
Q Consensus 67 ~~~l~~~~~d~~v~iwd~~~~~~~~~~~---~-~~~~i~~~~~~~-~~~~l~~~~~-----------------~~~i~-- 122 (213)
++ |+.+...+.+..+|..+++...... + .......+++.+ +++.+++... ++.+.
T Consensus 92 g~-l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~ 170 (322)
T 2fp8_A 92 NQ-LYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKY 170 (322)
T ss_dssp TE-EEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEE
T ss_pred Cc-EEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEE
Confidence 65 5444444558888877653221111 1 113467899999 8887666432 12222
Q ss_pred --------------eceEEEEEccCCceEEEe-cCCCcEEEEEccC
Q psy7433 123 --------------SPVKCLAIDPHEEFFVTG-AGDGDIKVWSLSG 153 (213)
Q Consensus 123 --------------~~v~~~~~~~~~~~l~~~-~~dg~i~v~d~~~ 153 (213)
.....++|+|++++|..+ +.++.|.+|++..
T Consensus 171 d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 171 DPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp ETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred eCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 235678999999855544 5668999999864
No 247
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.53 E-value=1.5e-05 Score=65.24 Aligned_cols=103 Identities=11% Similarity=0.047 Sum_probs=65.2
Q ss_pred ceEEEEEe-CCCCeEEEeec--cCCCccEEEEeCCCcccccce-eeeeeecCCceEEEEecCCCEEEEEcCC-----CcE
Q psy7433 9 ITSDFVFL-GSCSLVATAGH--SSESKNVCLWDSLLPQKKALV-QAFVCHDQGASSLVFAPQHQLLISAGKK-----GDI 79 (213)
Q Consensus 9 ~v~~~~~~-~~~~~l~~~g~--~s~~~~i~iwd~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v 79 (213)
.+...+|| |||++||.+.. ++....|+++|+.... +.+ ..+.. ....+.|+|+++.|+....+ ..|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~--~~l~~~~~~---~~~~~~WspDg~~l~y~~~d~~~~~~~v 249 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPS--QTIADKVSG---TNGEIVWGPDHTSLFYVTKDETLRENKV 249 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTT--CCCCCCEEE---ECSCCEECSSTTEEEEEEECTTCCEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCC--EeCCccccC---ceeeEEEecCCCEEEEEEECCCCCCCEE
Confidence 67889999 99999886531 0122359999995320 221 11221 14568999999888776654 357
Q ss_pred EEEeccCce--EEEecc-cCCCCeeEEEecCCCCEEEEec
Q psy7433 80 CVIDLRQRV--IRSRFN-AHESPVKCLAIDPHEEFFVTGA 116 (213)
Q Consensus 80 ~iwd~~~~~--~~~~~~-~~~~~i~~~~~~~~~~~l~~~~ 116 (213)
..+++.+++ ....+. ........+.|+|++++|+...
T Consensus 250 ~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~ 289 (751)
T 2xe4_A 250 WRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGS 289 (751)
T ss_dssp EEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEE
T ss_pred EEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEe
Confidence 888887653 122222 2233456789999999877655
No 248
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.52 E-value=0.00011 Score=53.88 Aligned_cols=184 Identities=14% Similarity=0.023 Sum_probs=108.7
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCC-CEEEEEcCCCcEEEEeccCc
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQH-QLLISAGKKGDICVIDLRQR 87 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~iwd~~~~ 87 (213)
.+.+++|.+.+..|.-+. ...+.|..++.+.. ......+.........+++.+.+ ++.++-...+.|.++++...
T Consensus 36 ~~~~ld~d~~~~~lyw~D--~~~~~I~r~~~~g~--~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~ 111 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSD--VSEEAIKRTEFNKT--ESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS 111 (318)
T ss_dssp EEEEEEEEGGGTEEEEEE--TTTTEEEEEETTSS--SCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred ccEEEEEEeCCCEEEEEE--CCCCcEEEEEccCC--CceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCC
Confidence 466888998544444442 46788999987422 11111222223456789999744 44455556778999998754
Q ss_pred eEEEecccCCCCeeEEEecCCCCEEEEecC--CCcee-----------------eceEEEEEccCCceEEEe-cCCCcEE
Q psy7433 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAG--DGDIK-----------------SPVKCLAIDPHEEFFVTG-AGDGDIK 147 (213)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--~~~i~-----------------~~v~~~~~~~~~~~l~~~-~~dg~i~ 147 (213)
.....+.........+++.|.+..+..+.. .+.|. .....++++|++..|..+ +..+.|.
T Consensus 112 ~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~ 191 (318)
T 3sov_A 112 LRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIH 191 (318)
T ss_dssp SCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred cEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEE
Confidence 333333334456788889886444444332 23332 456889999966655444 5567899
Q ss_pred EEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCc
Q psy7433 148 VWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 148 v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 206 (213)
.+|+............. .....+++..+..+.+-...+.|..++..+++
T Consensus 192 ~~d~dG~~~~~~~~~~~----------~~P~glav~~~~lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 192 KSNLDGTNRQAVVKGSL----------PHPFALTLFEDILYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp EEETTSCSCEEEECSCC----------SCEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred EEcCCCCceEEEecCCC----------CCceEEEEeCCEEEEEecCCCeEEEEECCCCC
Confidence 99986322221222111 34667777655556666667788888876554
No 249
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.49 E-value=2.5e-05 Score=58.45 Aligned_cols=130 Identities=11% Similarity=0.138 Sum_probs=78.6
Q ss_pred CCEEEEEcCCCcEEEEeccCceEEEecccCCCC-------eeEEEecC--CCCEEEEecCCCcee---------------
Q psy7433 67 HQLLISAGKKGDICVIDLRQRVIRSRFNAHESP-------VKCLAIDP--HEEFFVTGAGDGDIK--------------- 122 (213)
Q Consensus 67 ~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~-------i~~~~~~~--~~~~l~~~~~~~~i~--------------- 122 (213)
+..++.+..++.+..+|..+++.+......... +..+...| .+..+.+++.++.+.
T Consensus 188 ~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~ 267 (376)
T 3q7m_A 188 FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKREL 267 (376)
T ss_dssp TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECC
T ss_pred CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccC
Confidence 446778888999999999999877655422100 00011111 234455555555443
Q ss_pred eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeC
Q psy7433 123 SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQL 202 (213)
Q Consensus 123 ~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~ 202 (213)
.....+.. ++..+..++.++.+..+|.++++.+........ ..+...... ++.|+.++.+|.+..+|.
T Consensus 268 ~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~---------~~~~~~~~~-~~~l~v~~~~g~l~~~d~ 335 (376)
T 3q7m_A 268 GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLH---------RLLTSPVLY-NGNLVVGDSEGYLHWINV 335 (376)
T ss_dssp CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTT---------SCCCCCEEE-TTEEEEECTTSEEEEEET
T ss_pred CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCC---------CcccCCEEE-CCEEEEEeCCCeEEEEEC
Confidence 22223333 356677788899999999999988766652111 111111222 568888999999999999
Q ss_pred CCCccc
Q psy7433 203 PDRDAV 208 (213)
Q Consensus 203 ~~~~~~ 208 (213)
.+++..
T Consensus 336 ~tG~~~ 341 (376)
T 3q7m_A 336 EDGRFV 341 (376)
T ss_dssp TTCCEE
T ss_pred CCCcEE
Confidence 887643
No 250
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.49 E-value=1.1e-05 Score=65.35 Aligned_cols=148 Identities=14% Similarity=0.186 Sum_probs=99.2
Q ss_pred EEEEEeCCCCeEEEeeccCCCc-------------------cEEEEeCCCcccccceeeeeeec---------CCceEEE
Q psy7433 11 SDFVFLGSCSLVATAGHSSESK-------------------NVCLWDSLLPQKKALVQAFVCHD---------QGASSLV 62 (213)
Q Consensus 11 ~~~~~~~~~~~l~~~g~~s~~~-------------------~i~iwd~~~~~~~~~~~~~~~~~---------~~v~~~~ 62 (213)
..++++|++..++.+ ..++ .|..+|. .+++.+..++... .....+.
T Consensus 246 ~~~~~d~~~~~vy~~---~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~---~TG~~~W~~~~~~~d~wd~~~~~~p~l~~ 319 (677)
T 1kb0_A 246 DSMTFDAELNTMYVG---TGNGSPWSHKVRSPKGGDNLYLASIVALDP---DTGKYKWHYQETPGDNWDYTSTQPMILAD 319 (677)
T ss_dssp SCEEEETTTTEEEEE---CCCEESSCHHHHSTTCCCCTTTTEEEEECT---TTCCEEEEEESSTTCCSCCCCCSCCEEEE
T ss_pred cceeEcCCCCEEEEE---CCCCccccCCCCCccCCCCeeeEEEEEEEC---CCCCEEEEEecCCCcccccccCCCcEEEe
Confidence 457888988887776 3443 4889998 5666666655321 1222333
Q ss_pred EecCC---CEEEEEcCCCcEEEEeccCceEEEecccCCC-----------Ce------------------------eEEE
Q psy7433 63 FAPQH---QLLISAGKKGDICVIDLRQRVIRSRFNAHES-----------PV------------------------KCLA 104 (213)
Q Consensus 63 ~~~~~---~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~-----------~i------------------------~~~~ 104 (213)
...+| ..++.++.+|.++++|.++++.+..++.... ++ ..++
T Consensus 320 ~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a 399 (677)
T 1kb0_A 320 IKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMS 399 (677)
T ss_dssp EEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCE
T ss_pred cccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCce
Confidence 33467 6789999999999999999988765542110 01 1568
Q ss_pred ecCCCCEEEEecCC-------------------------------------------Ccee----------------ece
Q psy7433 105 IDPHEEFFVTGAGD-------------------------------------------GDIK----------------SPV 125 (213)
Q Consensus 105 ~~~~~~~l~~~~~~-------------------------------------------~~i~----------------~~v 125 (213)
++|+...+++...+ +.+. .++
T Consensus 400 ~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~ 479 (677)
T 1kb0_A 400 FNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPW 479 (677)
T ss_dssp EETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSC
T ss_pred EcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCC
Confidence 88887777664321 2232 223
Q ss_pred EEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCC
Q psy7433 126 KCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEH 164 (213)
Q Consensus 126 ~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~ 164 (213)
....+...+.+++.++.||.+++||.++++.+..+....
T Consensus 480 ~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~ 518 (677)
T 1kb0_A 480 NGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGT 518 (677)
T ss_dssp CCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred cCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCC
Confidence 334455667788889999999999999999998887653
No 251
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.47 E-value=3.6e-05 Score=57.56 Aligned_cols=133 Identities=8% Similarity=0.089 Sum_probs=78.5
Q ss_pred CCeEEEeeccCCCccEEEEeCCCcccccceeeeeee---------cCCceEEEEecCCCEEEEEcCCCcEEEEeccCceE
Q psy7433 19 CSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCH---------DQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVI 89 (213)
Q Consensus 19 ~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~---------~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~ 89 (213)
+..+.++ +.++.|..+|. .+++.+...... ...+.. ....++..++.++.++.|..+|.++++.
T Consensus 53 ~~~v~~~---~~~g~v~a~d~---~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~~~g~l~a~d~~tG~~ 125 (376)
T 3q7m_A 53 DNVVYAA---DRAGLVKALNA---DDGKEIWSVSLAEKDGWFSKEPALLSG-GVTVSGGHVYIGSEKAQVYALNTSDGTV 125 (376)
T ss_dssp TTEEEEE---CTTSEEEEEET---TTCCEEEEEECCC---CCSCCCCCEEE-EEEEETTEEEEEETTSEEEEEETTTCCE
T ss_pred CCEEEEE---cCCCeEEEEEc---cCCceeeeecCccccccccccCccccc-CceEeCCEEEEEcCCCEEEEEECCCCCE
Confidence 4455555 46889999998 455555444332 112222 1222456788888899999999999987
Q ss_pred EEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------ece------EEEEEccCCceEEEecCCCcEE
Q psy7433 90 RSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------SPV------KCLAIDPHEEFFVTGAGDGDIK 147 (213)
Q Consensus 90 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------~~v------~~~~~~~~~~~l~~~~~dg~i~ 147 (213)
+................ +..+++++.++.+. ..+ ...... +..++.++.++.+.
T Consensus 126 ~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~ 201 (376)
T 3q7m_A 126 AWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVS 201 (376)
T ss_dssp EEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEE
T ss_pred EEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEE
Confidence 76655332221112222 33555566565443 111 111121 34677788899999
Q ss_pred EEEccCCeeeeeecC
Q psy7433 148 VWSLSGNHLLYNFPG 162 (213)
Q Consensus 148 v~d~~~~~~~~~~~~ 162 (213)
.+|.++++.+.....
T Consensus 202 ~~d~~tG~~~w~~~~ 216 (376)
T 3q7m_A 202 AVLMEQGQMIWQQRI 216 (376)
T ss_dssp EEETTTCCEEEEEEC
T ss_pred EEECCCCcEEEEEec
Confidence 999998887766543
No 252
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.44 E-value=3.3e-05 Score=54.93 Aligned_cols=153 Identities=11% Similarity=0.067 Sum_probs=96.1
Q ss_pred cceeeeeeecC--CceEEEEecCCCEEEEEcC--CCcEEEEeccCceEEEecccCCC-CeeEEEecCCCCEEEEec-CCC
Q psy7433 46 ALVQAFVCHDQ--GASSLVFAPQHQLLISAGK--KGDICVIDLRQRVIRSRFNAHES-PVKCLAIDPHEEFFVTGA-GDG 119 (213)
Q Consensus 46 ~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~--d~~v~iwd~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~-~~~ 119 (213)
+.+.++. |.. ....+.|++++.+.++.+. ++.|.++|+.+++.+..+.-... ....+++. +..+..+. .++
T Consensus 10 ~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~ 86 (266)
T 2iwa_A 10 EVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKN 86 (266)
T ss_dssp EEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCS
T ss_pred eEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCC
Confidence 4555553 443 2578999998754444443 57999999999998887653222 22345554 44444444 334
Q ss_pred cee----------e----c-eEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC
Q psy7433 120 DIK----------S----P-VKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG 184 (213)
Q Consensus 120 ~i~----------~----~-v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 184 (213)
.+. . . .....+++|++.++++..++.|.++|..+.+.+..+........ -..++.+.+.
T Consensus 87 ~v~viD~~t~~v~~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p-----~~~~nele~~- 160 (266)
T 2iwa_A 87 IGFIYDRRTLSNIKNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHR-----VIRLNELEYI- 160 (266)
T ss_dssp EEEEEETTTTEEEEEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEE-----CCCEEEEEEE-
T ss_pred EEEEEECCCCcEEEEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcc-----cccceeEEEE-
Confidence 332 1 1 22335677888777777789999999999888777764321000 0236677777
Q ss_pred CCeEE-EEecCCcEEEEeCCCCcc
Q psy7433 185 GSRLF-SCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 185 ~~~l~-s~~~d~~i~iw~~~~~~~ 207 (213)
++++. ....++.|.+.|..+++.
T Consensus 161 dg~lyvn~~~~~~V~vID~~tg~V 184 (266)
T 2iwa_A 161 NGEVWANIWQTDCIARISAKDGTL 184 (266)
T ss_dssp TTEEEEEETTSSEEEEEETTTCCE
T ss_pred CCEEEEecCCCCeEEEEECCCCcE
Confidence 45654 444678999999988754
No 253
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.44 E-value=0.00023 Score=53.93 Aligned_cols=189 Identities=11% Similarity=0.034 Sum_probs=111.3
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccc-ccceeeeeeecCCceEEEEec-CCCEEEEEcCCCcEEEEec
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQK-KALVQAFVCHDQGASSLVFAP-QHQLLISAGKKGDICVIDL 84 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~-~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~iwd~ 84 (213)
.+.+.+++|++.+..|..+. ...+.|+.++++.... ......+.........+++.+ .+++.++-...+.|.+.++
T Consensus 111 ~~~~~~l~~d~~~~~lywsD--~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~ 188 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSD--LSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 188 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEE--TTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred cCcceEEeeeeccCceEEEe--cCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeC
Confidence 35678899998655555442 4678888888742110 112222222334567899998 4445555556788999998
Q ss_pred cCceEEEecccCCCCeeEEEecCCCCEEEEec-C-CCcee-----------------eceEEEEEccCCceEEEe-cCCC
Q psy7433 85 RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGA-G-DGDIK-----------------SPVKCLAIDPHEEFFVTG-AGDG 144 (213)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~-~~~i~-----------------~~v~~~~~~~~~~~l~~~-~~dg 144 (213)
+.......+.........++++|.+..|.... . .+.|. .....+++++++..|..+ ...+
T Consensus 189 ~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~ 268 (400)
T 3p5b_L 189 KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 268 (400)
T ss_dssp TTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred CCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCC
Confidence 76544444443445578999998655444433 2 23332 457889999877655555 4567
Q ss_pred cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCC
Q psy7433 145 DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 145 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 205 (213)
.|..+|+............... ....++++..+..+.+-...+.|..++..++
T Consensus 269 ~I~~~d~dG~~~~~~~~~~~~l--------~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G 321 (400)
T 3p5b_L 269 SISSIDVNGGNRKTILEDEKRL--------AHPFSLAVFEDKVFWTDIINEAIFSANRLTG 321 (400)
T ss_dssp EEEEEETTSCCCEEEEECSSTT--------SSEEEEEEETTEEEEEESSSCSEEEEESSSC
T ss_pred EEEEEeCCCCccEEEEeCCCCC--------CCCEEEEEeCCEEEEecCCCCeEEEEEcCCC
Confidence 8999998643332222221110 3455667654545566666678888875554
No 254
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.41 E-value=8.7e-06 Score=65.77 Aligned_cols=178 Identities=13% Similarity=0.150 Sum_probs=101.2
Q ss_pred EEEEEeCCCCeEEEeeccCCCc-------------------cEEEEeCCCcccccceeeeeee--c-------CCceEEE
Q psy7433 11 SDFVFLGSCSLVATAGHSSESK-------------------NVCLWDSLLPQKKALVQAFVCH--D-------QGASSLV 62 (213)
Q Consensus 11 ~~~~~~~~~~~l~~~g~~s~~~-------------------~i~iwd~~~~~~~~~~~~~~~~--~-------~~v~~~~ 62 (213)
..+++.|+...++.+ +.++ .|..+|. .+++.+..++.. . .+.....
T Consensus 233 ~~~a~d~~~~~vy~~---~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~---~tG~~~W~~~~~~~~~wd~~~~~~~~~~d 306 (668)
T 1kv9_A 233 DSMAYDPELDLLYVG---TGNGSPWNREVRSPGGGDNLYLSSILAIRP---DTGKLAWHYQVTPGDSWDFTATQQITLAE 306 (668)
T ss_dssp SCEEEETTTTEEEEE---CCCEESSCHHHHSTTCCCCTTTTEEEEECT---TTCCEEEEEESSTTCCSCCCCCSCEEEEE
T ss_pred cceEEcCCCCEEEEe---CCCCCccccCCCCCCCCCceeeeeEEEEcC---CCCceeeEeecCCCccccccCCCCcEEEE
Confidence 357888887777776 4454 4889998 566666665532 1 2222223
Q ss_pred EecCCC---EEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecC-CCC-------------EEEEecCCCceeece
Q psy7433 63 FAPQHQ---LLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDP-HEE-------------FFVTGAGDGDIKSPV 125 (213)
Q Consensus 63 ~~~~~~---~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~-~~~-------------~l~~~~~~~~i~~~v 125 (213)
+..+++ .++.++.+|.++++|.++++.+...+..... +...+.+ .+. .++.-+..+. ..-
T Consensus 307 ~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~-w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~--~~w 383 (668)
T 1kv9_A 307 LNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVT-WAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGA--HNW 383 (668)
T ss_dssp EEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCC-SEEEECTTTCCEEECTTTTCSSSCEEESSCTTCS--SCS
T ss_pred eccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccc-cccccccccCCccccccccccCCeeEECCCCccc--cCC
Confidence 334664 6889999999999999999887554322210 1111110 000 0000000000 011
Q ss_pred EEEEEccCCceEEE------------------------------------ecCCCcEEEEEccCCeeeeeecCCCCceeE
Q psy7433 126 KCLAIDPHEEFFVT------------------------------------GAGDGDIKVWSLSGNHLLYNFPGEHARSSF 169 (213)
Q Consensus 126 ~~~~~~~~~~~l~~------------------------------------~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~ 169 (213)
..++++|+..++.+ ...+|.|..||+.+++.+-......
T Consensus 384 ~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~----- 458 (668)
T 1kv9_A 384 HSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT----- 458 (668)
T ss_dssp SCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS-----
T ss_pred CcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCC-----
Confidence 12344444332221 2245889999999999877665432
Q ss_pred EEecCCCeEEEEe-CCCCeEEEEecCCcEEEEeCCCCccc
Q psy7433 170 FKHIGQGVTQLHV-DGGSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 170 ~~~~~~~v~~~~~-~~~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
+.....+ ..++.++.++.|+.++.||..+++.+
T Consensus 459 ------~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l 492 (668)
T 1kv9_A 459 ------HWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEAL 492 (668)
T ss_dssp ------SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred ------CCcCceeEeCCCEEEEECCcccchhhhhhcChhh
Confidence 1211111 24678888999999999999988654
No 255
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.36 E-value=3.5e-05 Score=54.40 Aligned_cols=151 Identities=9% Similarity=0.086 Sum_probs=91.5
Q ss_pred ceeeeeeecCCc--eEEEEecCCCEEEEEcCCC--cEEEEeccCceEEEecccCCCC-eeEEEecCCCCEEEEecC-CCc
Q psy7433 47 LVQAFVCHDQGA--SSLVFAPQHQLLISAGKKG--DICVIDLRQRVIRSRFNAHESP-VKCLAIDPHEEFFVTGAG-DGD 120 (213)
Q Consensus 47 ~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~d~--~v~iwd~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~~~~-~~~ 120 (213)
.++.++ |.... ..+.|+ ++.++.+.+.+| .|+.+|+++++.+..+.-.... -..++.. +..+..... ++.
T Consensus 33 vv~~~p-hd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~~ 108 (262)
T 3nol_A 33 IVHSYP-HDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW--KDKIVGLTWKNGL 108 (262)
T ss_dssp EEEEEE-CCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSE
T ss_pred EEEEec-CCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe--CCEEEEEEeeCCE
Confidence 445553 44433 778888 666666766665 8999999999988877643222 1224443 444444432 333
Q ss_pred ee--------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC
Q psy7433 121 IK--------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS 186 (213)
Q Consensus 121 i~--------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 186 (213)
+. ..-....+.++++.|+.+..++.|.++|..+.+.+..+........ -..++.+.|. ++
T Consensus 109 v~v~D~~t~~~~~ti~~~~eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~-----~~~lNELe~~-~G 182 (262)
T 3nol_A 109 GFVWNIRNLRQVRSFNYDGEGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEE-----LPELNELEWV-DG 182 (262)
T ss_dssp EEEEETTTCCEEEEEECSSCCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEE-----CCCEEEEEEE-TT
T ss_pred EEEEECccCcEEEEEECCCCceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCcc-----ccccceeEEE-CC
Confidence 32 1112244556778777777788999999999888877765321000 0234556676 44
Q ss_pred eEEE-EecCCcEEEEeCCCCcc
Q psy7433 187 RLFS-CGADGSMKVRQLPDRDA 207 (213)
Q Consensus 187 ~l~s-~~~d~~i~iw~~~~~~~ 207 (213)
+|.+ .-.++.|.+.|..+++.
T Consensus 183 ~lyan~w~~~~I~vIDp~tG~V 204 (262)
T 3nol_A 183 EIFANVWQTNKIVRIDPETGKV 204 (262)
T ss_dssp EEEEEETTSSEEEEECTTTCBE
T ss_pred EEEEEEccCCeEEEEECCCCcE
Confidence 5444 44577888888887753
No 256
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.33 E-value=0.00085 Score=55.34 Aligned_cols=182 Identities=9% Similarity=0.134 Sum_probs=114.6
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee---------eecCCceEEEEecCCCEEEEEcCCC
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV---------CHDQGASSLVFAPQHQLLISAGKKG 77 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~~~~~d~ 77 (213)
...|.++...++|.+-+.+ .++-|..|+.. +.. ...+. .....|.+++..++++.|..|+.++
T Consensus 356 ~~~V~~i~~d~~g~lWiGt----~~~Gl~~~~~~---~~~-~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~ 427 (795)
T 4a2l_A 356 DNVVSCIVEDKDKNLWIGT----NDGGLNLYNPI---TQR-FTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAG 427 (795)
T ss_dssp CSSEEEEEECTTSCEEEEE----SSSCEEEECTT---TCC-EEEECCC------CCSCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCeeEEEEECCCCCEEEEE----CCCCeEEEcCC---CCc-EEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcC
Confidence 3469999998888877654 56779999863 222 11211 1135688998888888566677767
Q ss_pred cEEEEeccCceEEEecc----cCCCCeeEEEecCCCCEEEEecCCCcee----------------------eceEEEEEc
Q psy7433 78 DICVIDLRQRVIRSRFN----AHESPVKCLAIDPHEEFFVTGAGDGDIK----------------------SPVKCLAID 131 (213)
Q Consensus 78 ~v~iwd~~~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------------~~v~~~~~~ 131 (213)
-|..||..+++...... .....|.++...+++...+... +|..+ ..|.++..+
T Consensus 428 Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d 506 (795)
T 4a2l_A 428 GLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRD 506 (795)
T ss_dssp EEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEEC
T ss_pred ceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-CceeEEeCCCCeEEEccccccccccCCceEEEEEEC
Confidence 79999988775443221 1235688888888777554433 44222 246778888
Q ss_pred cCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCC
Q psy7433 132 PHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 132 ~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 205 (213)
++|++.+.. . +-+..||..+.+. .+....... ......|.++..++++.|..++.. .+..||..++
T Consensus 507 ~~g~lWigt-~-~Gl~~~~~~~~~~--~~~~~~~~~---~l~~~~i~~i~~d~~g~lWigT~~-Gl~~~d~~~~ 572 (795)
T 4a2l_A 507 SHKRLWIGG-E-EGLSVFKQEGLDI--QKASILPVS---NVTKLFTNCIYEASNGIIWVGTRE-GFYCFNEKDK 572 (795)
T ss_dssp TTCCEEEEE-S-SCEEEEEEETTEE--EECCCSCSC---GGGGSCEEEEEECTTSCEEEEESS-CEEEEETTTT
T ss_pred CCCCEEEEe-C-CceEEEeCCCCeE--EEecCCCCC---CCCCCeeEEEEECCCCCEEEEeCC-CceeECCCCC
Confidence 888755544 3 4588899877655 222100000 001257899998887776666665 5778887654
No 257
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.32 E-value=2.7e-05 Score=55.05 Aligned_cols=151 Identities=13% Similarity=0.099 Sum_probs=92.0
Q ss_pred cceeeeeeecCC--ceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCCe--eEEEecCCCCEEEEec-CCCc
Q psy7433 46 ALVQAFVCHDQG--ASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPV--KCLAIDPHEEFFVTGA-GDGD 120 (213)
Q Consensus 46 ~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i--~~~~~~~~~~~l~~~~-~~~~ 120 (213)
+.++.++ |... ...+.|+ ++.+..+.+.+|.|+.+|+++++.+..+ -. ... ..+++. ++.+.... .++.
T Consensus 44 ~Vv~~~p-hd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~--g~~Ly~ltw~~~~ 117 (268)
T 3nok_A 44 HIIREYP-HATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASD--GERLYQLTWTEGL 117 (268)
T ss_dssp EEEEEEE-CCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEEC--SSCEEEEESSSCE
T ss_pred EEEEEEc-CCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEe--CCEEEEEEccCCE
Confidence 3445553 4433 3678887 4567778888899999999999877776 22 222 234444 33333333 3333
Q ss_pred ee-------ece-------EEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC
Q psy7433 121 IK-------SPV-------KCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS 186 (213)
Q Consensus 121 i~-------~~v-------~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 186 (213)
+. ..+ ....+.++++.|+.+..++.|.++|..+.+.+.++........ -..++.+.|..+.
T Consensus 118 v~V~D~~Tl~~~~ti~~~~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~-----v~~lNeLe~~dG~ 192 (268)
T 3nok_A 118 LFTWSGMPPQRERTTRYSGEGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQP-----VELINELECANGV 192 (268)
T ss_dssp EEEEETTTTEEEEEEECSSCCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEE-----CCCEEEEEEETTE
T ss_pred EEEEECCcCcEEEEEeCCCceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcc-----cccccccEEeCCE
Confidence 32 111 1233345677777777789999999999888877765321110 0245667777443
Q ss_pred eEEEEecCCcEEEEeCCCCcc
Q psy7433 187 RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 187 ~l~s~~~d~~i~iw~~~~~~~ 207 (213)
.++..-.++.|.+.|..+++.
T Consensus 193 lyanvw~s~~I~vIDp~TG~V 213 (268)
T 3nok_A 193 IYANIWHSSDVLEIDPATGTV 213 (268)
T ss_dssp EEEEETTCSEEEEECTTTCBE
T ss_pred EEEEECCCCeEEEEeCCCCcE
Confidence 344444677899999888753
No 258
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.32 E-value=1.4e-05 Score=64.87 Aligned_cols=188 Identities=11% Similarity=0.039 Sum_probs=103.9
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccc-ccceeeeeeecCCceEEEEecCC-CEEEEEcCCCcEEEEecc
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQK-KALVQAFVCHDQGASSLVFAPQH-QLLISAGKKGDICVIDLR 85 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~iwd~~ 85 (213)
..+.+++|.+.+..|..+. ...+.|+.+++..... ......+.........+++.+.+ +++++-...+.|.++++.
T Consensus 406 ~~p~gla~d~~~~~Ly~sD--~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~d 483 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSD--LSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 483 (699)
T ss_dssp TTCCCCEEETTTTEEEECC--TTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSS
T ss_pred cceEEEccccccCeEEEEe--cCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecC
Confidence 3456788998666666552 3567899998742100 11111111112234568888644 444444556889999987
Q ss_pred CceEEEecccCCCCeeEEEecCCCCEEEEecC-C-Ccee-----------------eceEEEEEccCCce-EEEecCCCc
Q psy7433 86 QRVIRSRFNAHESPVKCLAIDPHEEFFVTGAG-D-GDIK-----------------SPVKCLAIDPHEEF-FVTGAGDGD 145 (213)
Q Consensus 86 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-~-~~i~-----------------~~v~~~~~~~~~~~-l~~~~~dg~ 145 (213)
.......+.........++++|.+..|+.+.. . +.|. .....|+|+|++.. +++-+..+.
T Consensus 484 g~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~ 563 (699)
T 1n7d_A 484 GVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 563 (699)
T ss_dssp SCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTE
T ss_pred CCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCe
Confidence 65444334333345678889886554444332 1 2332 34567999987654 444456678
Q ss_pred EEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCC
Q psy7433 146 IKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 146 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 205 (213)
|.++|+........+..... ......+++..+..+++....+.|..++..++
T Consensus 564 I~~~d~dG~~~~~~~~~~~~--------~~~P~glavd~~~lywtd~~~~~V~~~d~~~G 615 (699)
T 1n7d_A 564 ISSIDVNGGNRKTILEDEKR--------LAHPFSLAVFEDKVFWTDIINEAIFSANRLTG 615 (699)
T ss_dssp EEEECSSSSCCEEECCCSSS--------CSSCCCCEEETTEEEEECSTTTCEEEEETTTE
T ss_pred EEEEccCCCceEEEEecCCc--------CCCceEeEEECCEEEEEeCCCCeEEEEEccCC
Confidence 99999864322222211110 02233445555544556556678888876554
No 259
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.31 E-value=0.0009 Score=55.18 Aligned_cols=187 Identities=13% Similarity=0.183 Sum_probs=115.2
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeee--------ecCCceEEEEecCCCEEEEEcCCCc
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVC--------HDQGASSLVFAPQHQLLISAGKKGD 78 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~~~d~~ 78 (213)
...|.++...+++.+.+.+ .++-+.+||.. ..+ ...+.. ....|.++...++|.+.+.. .+ -
T Consensus 214 ~~~i~~i~~d~~g~lwigt----~~~Gl~~~~~~---~~~-~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt-~~-G 283 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWVAT----EGAGLFLINPK---TKE-IKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGT-FN-D 283 (795)
T ss_dssp CCCEEEEEEEETTEEEEEE----BSSCEEEEETT---TTE-EEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEE-SS-C
T ss_pred CCeeEEEEEcCCCCEEEEE----CCCCeEEEeCC---CCe-EEEeecCCCCccccCCCeEEEEEEcCCCCEEEEe-CC-h
Confidence 4568888888888777755 34458889863 222 122211 13568899988888755544 44 5
Q ss_pred EEEEeccCceEEEeccc-------CCCCeeEEEecCCCCEEEEecCCCcee----------------------eceEEEE
Q psy7433 79 ICVIDLRQRVIRSRFNA-------HESPVKCLAIDPHEEFFVTGAGDGDIK----------------------SPVKCLA 129 (213)
Q Consensus 79 v~iwd~~~~~~~~~~~~-------~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------------~~v~~~~ 129 (213)
|.+||..+++....... ....|.++...+++...+.....|..+ ..|.++.
T Consensus 284 l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~ 363 (795)
T 4a2l_A 284 LNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIV 363 (795)
T ss_dssp EEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEE
T ss_pred hheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEE
Confidence 88899877754432211 235688999998887544333233221 3478888
Q ss_pred EccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEecCCcEEEEeCCCCc
Q psy7433 130 IDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 130 ~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d~~i~iw~~~~~~ 206 (213)
.+++|. |-.|+.++-|..||.+++............. .......|.++...+++. |..|+.++.+..||..+++
T Consensus 364 ~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~--~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~ 438 (795)
T 4a2l_A 364 EDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESA--RGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQ 438 (795)
T ss_dssp ECTTSC-EEEEESSSCEEEECTTTCCEEEECCC--------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCC
T ss_pred ECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcc--cCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCc
Confidence 888877 4457777778899987654332211110000 000125789999888777 8888887889999887653
No 260
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.23 E-value=0.00067 Score=50.37 Aligned_cols=177 Identities=16% Similarity=0.135 Sum_probs=101.0
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEE-cCCCcEEEEeccCce
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISA-GKKGDICVIDLRQRV 88 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~v~iwd~~~~~ 88 (213)
..|.+..++ .+|+.+ ....|+..++. .. ....+.........++|++....|+.. ...+.|..+++....
T Consensus 36 ~~C~~~~~~-~~ll~~----~~~~I~~i~~~---g~-~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~ 106 (349)
T 3v64_C 36 RSCKALGPE-PVLLFA----NRIDIRQVLPH---RS-EYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 106 (349)
T ss_dssp SCEEESSSC-CEEEEE----CBSCEEEECTT---SC-CEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CcccccccC-ceeEee----cccceEEEeCC---CC-eeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCC
Confidence 344444453 344443 35668888763 22 222222233457899999866555554 456789899987664
Q ss_pred EEEecccCCCCeeEEEecCCCC-EEEEecCCCcee-----------------eceEEEEEccCCceEE-EecCC-CcEEE
Q psy7433 89 IRSRFNAHESPVKCLAIDPHEE-FFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFV-TGAGD-GDIKV 148 (213)
Q Consensus 89 ~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~-~~~~d-g~i~v 148 (213)
....+.........+++.+.+. .+++-...+.|. .....++++|.+..|. +-..+ +.|..
T Consensus 107 ~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r 186 (349)
T 3v64_C 107 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEA 186 (349)
T ss_dssp CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEE
T ss_pred ceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEE
Confidence 3333332334456788887444 333333333332 4578899998655444 44444 77888
Q ss_pred EEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC-CCeEEE-EecCCcEEEEeCCCC
Q psy7433 149 WSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG-GSRLFS-CGADGSMKVRQLPDR 205 (213)
Q Consensus 149 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s-~~~d~~i~iw~~~~~ 205 (213)
+++..... ..+.... ....+.++++| +++|+. -...+.|..+++...
T Consensus 187 ~~~dG~~~-~~~~~~~---------~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~ 235 (349)
T 3v64_C 187 SSMDGSGR-RIIADTH---------LFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS 235 (349)
T ss_dssp EETTSCSC-EESCCSS---------CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EeCCCCCc-EEEEECC---------CCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 88753322 2221111 14578899996 555544 445678888887643
No 261
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.21 E-value=0.00025 Score=49.62 Aligned_cols=153 Identities=12% Similarity=0.083 Sum_probs=90.1
Q ss_pred cceeeeeeecC--CceEEEEecCCCEEEEEcCC--CcEEEEeccCceEEEecccCCCC-eeEEEecCCCCEEEEec-CCC
Q psy7433 46 ALVQAFVCHDQ--GASSLVFAPQHQLLISAGKK--GDICVIDLRQRVIRSRFNAHESP-VKCLAIDPHEEFFVTGA-GDG 119 (213)
Q Consensus 46 ~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d--~~v~iwd~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~~~-~~~ 119 (213)
+.++.+ .|.. -...+.|+. +.+..+.+.+ +.|+.+|+.+++.+..+.-.... -..++.. +..+.... .++
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~ 85 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNH 85 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSS
T ss_pred EEEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCC
Confidence 344555 3543 355888886 5556666664 48999999999988877533221 1233333 33333333 333
Q ss_pred cee--------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC
Q psy7433 120 DIK--------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG 185 (213)
Q Consensus 120 ~i~--------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 185 (213)
.+. ..-....+.++++.|+++..++.|.++|..+.+.+.++........ -..++.+.+..+
T Consensus 86 ~v~v~D~~tl~~~~ti~~~~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~-----~~~lNeLe~~~G 160 (243)
T 3mbr_X 86 EGFVYDLATLTPRARFRYPGEGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRP-----LDNLNELEWVNG 160 (243)
T ss_dssp EEEEEETTTTEEEEEEECSSCCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEE-----CCCEEEEEEETT
T ss_pred EEEEEECCcCcEEEEEeCCCCceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcc-----cccceeeEEeCC
Confidence 332 1112234446677777777788999999999888777765321100 024566666643
Q ss_pred CeEEEEecCCcEEEEeCCCCcc
Q psy7433 186 SRLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 186 ~~l~s~~~d~~i~iw~~~~~~~ 207 (213)
..++..-.+..|.+.|..+++.
T Consensus 161 ~lyanvw~s~~I~vIDp~tG~V 182 (243)
T 3mbr_X 161 ELLANVWLTSRIARIDPASGKV 182 (243)
T ss_dssp EEEEEETTTTEEEEECTTTCBE
T ss_pred EEEEEECCCCeEEEEECCCCCE
Confidence 3344444577888888887753
No 262
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.20 E-value=0.0013 Score=54.05 Aligned_cols=180 Identities=12% Similarity=0.141 Sum_probs=111.0
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeee----eeecCCceEEEEecCCCEEEEEcCCCcEEEEe
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAF----VCHDQGASSLVFAPQHQLLISAGKKGDICVID 83 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd 83 (213)
..|.++...++|.+.+.+ .++-|..|+.. .... ..+ ......|.++...+++++.+ |+.++-+..+|
T Consensus 363 ~~v~~i~~d~~g~lWigt----~~~Gl~~~~~~---~~~~-~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~ 433 (781)
T 3v9f_A 363 KVVSSVCDDGQGKLWIGT----DGGGINVFENG---KRVA-IYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYN 433 (781)
T ss_dssp SCEEEEEECTTSCEEEEE----BSSCEEEEETT---EEEE-ECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEEC
T ss_pred cceEEEEEcCCCCEEEEe----CCCcEEEEECC---CCeE-EEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEc
Confidence 568999988888776654 45668889863 2211 111 11235688888887776544 66666788999
Q ss_pred ccCceEEEecc--cCCCCeeEEEecCCCCEEEEecCCCcee---------------------eceEEEEEccCCceEEEe
Q psy7433 84 LRQRVIRSRFN--AHESPVKCLAIDPHEEFFVTGAGDGDIK---------------------SPVKCLAIDPHEEFFVTG 140 (213)
Q Consensus 84 ~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------------~~v~~~~~~~~~~~l~~~ 140 (213)
..+++...... .....|.++...+++...+. +..|..+ ..|.++...++|++.+ |
T Consensus 434 ~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwig-t~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-g 511 (781)
T 3v9f_A 434 TRLKKFQIIELEKNELLDVRVFYEDKNKKIWIG-THAGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-G 511 (781)
T ss_dssp SSSCEEEECCSTTTCCCCEEEEEECTTSEEEEE-ETTEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-E
T ss_pred CCCCcEEEeccCCCCCCeEEEEEECCCCCEEEE-ECCceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE-E
Confidence 87775433221 13457888888887764443 3344222 2477888888887554 4
Q ss_pred cCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCC
Q psy7433 141 AGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 141 ~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 205 (213)
+.++-+..||.++.+.. .+...... ....|.++...+++.|..++.+|.+..||..++
T Consensus 512 t~~~Gl~~~~~~~~~~~-~~~~~~~l------~~~~i~~i~~d~~g~lWi~T~~Glv~~~d~~~~ 569 (781)
T 3v9f_A 512 TFGGGVGIYTPDMQLVR-KFNQYEGF------CSNTINQIYRSSKGQMWLATGEGLVCFPSARNF 569 (781)
T ss_dssp ESSSCEEEECTTCCEEE-EECTTTTC------SCSCEEEEEECTTSCEEEEETTEEEEESCTTTC
T ss_pred EcCCCEEEEeCCCCeEE-EccCCCCC------CCCeeEEEEECCCCCEEEEECCCceEEECCCCC
Confidence 44334777887655433 23221110 025789999888777776766665588887654
No 263
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.18 E-value=0.0003 Score=53.81 Aligned_cols=138 Identities=12% Similarity=0.170 Sum_probs=90.9
Q ss_pred CceEEEEec-CCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecC-CCce----e--------
Q psy7433 57 GASSLVFAP-QHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAG-DGDI----K-------- 122 (213)
Q Consensus 57 ~v~~~~~~~-~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-~~~i----~-------- 122 (213)
....++++| ++..|+.+...+.|+.+|+..+....... .......++++++++.|+++.. ++.+ .
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~ 216 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGF 216 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTS
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCce
Confidence 457899998 45566666555889999998766544333 4556789999999995555543 2211 0
Q ss_pred ---------eceEEEEEcc-CCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EE-E
Q psy7433 123 ---------SPVKCLAIDP-HEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LF-S 190 (213)
Q Consensus 123 ---------~~v~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~-s 190 (213)
..+..++++| ++.++++-..++.|..++...+.......... ......++++|++. |+ +
T Consensus 217 ~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~---------~~~P~gia~~pdG~~lyv~ 287 (430)
T 3tc9_A 217 KVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQD---------SGWEFHIQFHPSGNYAYIV 287 (430)
T ss_dssp CSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSS---------SSCCEEEEECTTSSEEEEE
T ss_pred eeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCC---------CCcceeEEEcCCCCEEEEE
Confidence 3356788999 67666666677899999987665422221111 13467899999764 44 4
Q ss_pred EecCCcEEEEeCCC
Q psy7433 191 CGADGSMKVRQLPD 204 (213)
Q Consensus 191 ~~~d~~i~iw~~~~ 204 (213)
-...+.|..++...
T Consensus 288 d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 288 VVNQHYILRSDYDW 301 (430)
T ss_dssp ETTTTEEEEEEEET
T ss_pred ECCCCEEEEEeCCc
Confidence 44667888887653
No 264
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.17 E-value=0.0019 Score=53.18 Aligned_cols=189 Identities=11% Similarity=0.037 Sum_probs=106.7
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccc-ccceeeeeeecCCceEEEEecCCCEEE-EEcCCCcEEEEec
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQK-KALVQAFVCHDQGASSLVFAPQHQLLI-SAGKKGDICVIDL 84 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~iwd~ 84 (213)
.+.+.+|+|.+.+..|..+. ...+.|+.++++.... ......+.........|++.+.+..|+ +-...+.|.+.++
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD--~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~l 500 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSD--LSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 500 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEE--TTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCceEEEeecccCCeeEEee--ccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeC
Confidence 34577889988554444432 4667888888742110 112222222335567899998665554 4456788999998
Q ss_pred cCceEEEecccCCCCeeEEEecCCCCEEEEec-CC-Ccee-----------------eceEEEEEccCCceEEEe-cCCC
Q psy7433 85 RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGA-GD-GDIK-----------------SPVKCLAIDPHEEFFVTG-AGDG 144 (213)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~~-~~i~-----------------~~v~~~~~~~~~~~l~~~-~~dg 144 (213)
........+.........|+++|....|.... .. +.|. ..+..|++++.+..|+.+ ...+
T Consensus 501 dG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~ 580 (791)
T 3m0c_C 501 KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 580 (791)
T ss_dssp TSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred CCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCC
Confidence 76544333333445678999998654444433 22 3332 467889999776655555 4557
Q ss_pred cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCC
Q psy7433 145 DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 145 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 205 (213)
.|..+++........+...... ....+|++..+..+++-...+.|...+..++
T Consensus 581 ~I~~~d~dG~~~~~v~~~~~~l--------~~P~glav~~~~lYwtD~~~~~I~~~dk~tG 633 (791)
T 3m0c_C 581 SISSIDVNGGNRKTILEDEKRL--------AHPFSLAVFEDKVFWTDIINEAIFSANRLTG 633 (791)
T ss_dssp EEEEEETTSCSCEEEEECTTTT--------SSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred cEEEEecCCCceEEEecCCCcc--------CCCCEEEEeCCEEEEEECCCCEEEEEeCCCC
Confidence 8888888543332222221110 2345566654433444445566766665444
No 265
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.13 E-value=0.00015 Score=55.55 Aligned_cols=136 Identities=9% Similarity=0.103 Sum_probs=83.0
Q ss_pred CceEEEEEeC-CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC-C----cEEE
Q psy7433 8 KITSDFVFLG-SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK-G----DICV 81 (213)
Q Consensus 8 ~~v~~~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~----~v~i 81 (213)
.....++++| ++..|..+ ...+.|+.+|++ .. .+..+.........++|++++++|+.+... + .+..
T Consensus 137 ~~P~~lavdp~~~g~Lyv~---d~~~~I~~id~~---~~-~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~ 209 (430)
T 3tc9_A 137 GGAVWLSFDPKNHNHLYLV---GEQHPTRLIDFE---KE-YVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYI 209 (430)
T ss_dssp SCCCEEEEETTEEEEEEEE---EBTEEEEEEETT---TT-EEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEE
T ss_pred CCCCEEEECCCCCCeEEEE---eCCCcEEEEECC---CC-EEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEE
Confidence 3567899998 34455554 233889999973 22 233333344567899999999966666542 1 2333
Q ss_pred EeccCceEE--EecccCCCCeeEEEecC-CCCEEEEecCCCcee------------------eceEEEEEccCCce-EEE
Q psy7433 82 IDLRQRVIR--SRFNAHESPVKCLAIDP-HEEFFVTGAGDGDIK------------------SPVKCLAIDPHEEF-FVT 139 (213)
Q Consensus 82 wd~~~~~~~--~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~i~------------------~~v~~~~~~~~~~~-l~~ 139 (213)
++. .+... ..+.. ......++++| ++..+++-..++.+. .....++|+|++++ +++
T Consensus 210 ~~~-~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~ 287 (430)
T 3tc9_A 210 LTR-ESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIV 287 (430)
T ss_dssp EEG-GGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEE
T ss_pred EeC-CCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEE
Confidence 443 33111 22221 23457788999 666665554555443 23667999999994 555
Q ss_pred ecCCCcEEEEEcc
Q psy7433 140 GAGDGDIKVWSLS 152 (213)
Q Consensus 140 ~~~dg~i~v~d~~ 152 (213)
-...+.|..++..
T Consensus 288 d~~~~~I~~~~~d 300 (430)
T 3tc9_A 288 VVNQHYILRSDYD 300 (430)
T ss_dssp ETTTTEEEEEEEE
T ss_pred ECCCCEEEEEeCC
Confidence 5567889998875
No 266
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.12 E-value=0.0011 Score=54.58 Aligned_cols=180 Identities=12% Similarity=0.154 Sum_probs=108.5
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee---eecCCceEEEEecCCCEEEEEcCCCcEEEEe
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV---CHDQGASSLVFAPQHQLLISAGKKGDICVID 83 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd 83 (213)
...|.++...+++.+.+.. .++-+..++.+ +.+ ...+. .....|.++...+++.+.+. +. +-|..+|
T Consensus 406 ~~~v~~i~~d~~g~lWigt----~~~Gl~~~~~~---~~~-~~~~~~~~~~~~~v~~i~~d~~g~lwig-t~-~Gl~~~~ 475 (781)
T 3v9f_A 406 SNSVLCSLKDSEGNLWFGT----YLGNISYYNTR---LKK-FQIIELEKNELLDVRVFYEDKNKKIWIG-TH-AGVFVID 475 (781)
T ss_dssp CSBEEEEEECTTSCEEEEE----TTEEEEEECSS---SCE-EEECCSTTTCCCCEEEEEECTTSEEEEE-ET-TEEEEEE
T ss_pred CcceEEEEECCCCCEEEEe----ccCCEEEEcCC---CCc-EEEeccCCCCCCeEEEEEECCCCCEEEE-EC-CceEEEe
Confidence 3568899888888877754 56678888863 222 22221 12356888888887765544 44 5688899
Q ss_pred ccCceEEEecccC-----CCCeeEEEecCCCCEEEEecCCCcee-------------------eceEEEEEccCCceEEE
Q psy7433 84 LRQRVIRSRFNAH-----ESPVKCLAIDPHEEFFVTGAGDGDIK-------------------SPVKCLAIDPHEEFFVT 139 (213)
Q Consensus 84 ~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~l~~~~~~~~i~-------------------~~v~~~~~~~~~~~l~~ 139 (213)
..+++........ ...|.++...+++...+.....|..+ ..|.++..+++|.+.++
T Consensus 476 ~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~ 555 (781)
T 3v9f_A 476 LASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLA 555 (781)
T ss_dssp SSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEE
T ss_pred CCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEE
Confidence 8776443222111 35688998888887655443344332 35778888888875554
Q ss_pred ecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCC
Q psy7433 140 GAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 140 ~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 205 (213)
. .+|.+..||.++.+. ..+...... ....|.++..++++.|..++.+| +..++..+.
T Consensus 556 T-~~Glv~~~d~~~~~~-~~~~~~~gl------~~~~i~~i~~d~~g~lW~~t~~G-l~~~~~~~~ 612 (781)
T 3v9f_A 556 T-GEGLVCFPSARNFDY-QVFQRKEGL------PNTHIRAISEDKNGNIWASTNTG-ISCYITSKK 612 (781)
T ss_dssp E-TTEEEEESCTTTCCC-EEECGGGTC------SCCCCCEEEECSSSCEEEECSSC-EEEEETTTT
T ss_pred E-CCCceEEECCCCCcE-EEccccCCC------CCceEEEEEECCCCCEEEEcCCc-eEEEECCCC
Confidence 4 466547888765542 222111100 01457788888777776666655 566665543
No 267
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.12 E-value=0.0018 Score=51.92 Aligned_cols=185 Identities=14% Similarity=0.024 Sum_probs=105.1
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEE-EEcCCCcEEEEeccC
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLI-SAGKKGDICVIDLRQ 86 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~iwd~~~ 86 (213)
+.+.+++|++.+..|..+. ...+.|..++++. .......+.........+++.+.+..|+ +-...+.|.+.++..
T Consensus 40 ~~~~~ld~~~~~~~ly~sD--~~~~~I~r~~~~g--~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG 115 (619)
T 3s94_A 40 EDAAAVDFVFSHGLIYWSD--VSEEAIKRTEFNK--TESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDG 115 (619)
T ss_dssp SCEEEEEEETTTTEEEEEE--TTTTEEEEEEC-------CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CceEEEEEEeCCCEEEEEE--CCCCeEEEEEccC--CCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCC
Confidence 4577889998666555542 4567888888732 1111222222224678899998555454 445678899999876
Q ss_pred ceEEEecccCCCCeeEEEecCCCCEEEEecC--CCcee-----------------eceEEEEEccCCceEEEe-cCCCcE
Q psy7433 87 RVIRSRFNAHESPVKCLAIDPHEEFFVTGAG--DGDIK-----------------SPVKCLAIDPHEEFFVTG-AGDGDI 146 (213)
Q Consensus 87 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--~~~i~-----------------~~v~~~~~~~~~~~l~~~-~~dg~i 146 (213)
......+...-.....+++.|.+..|..... .+.|. ..+..++++++++.|..+ ...+.|
T Consensus 116 ~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I 195 (619)
T 3s94_A 116 SLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFI 195 (619)
T ss_dssp CSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCE
T ss_pred CCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeE
Confidence 5332233233445678999886444433332 22332 457889999876654444 456788
Q ss_pred EEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCc
Q psy7433 147 KVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 147 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 206 (213)
..+|+............. ....++++.++..+.+-...+.|...|..+++
T Consensus 196 ~~~~~dG~~~~~~~~~~~----------~~P~gi~~~~~~ly~td~~~~~V~~~d~~tg~ 245 (619)
T 3s94_A 196 HKSNLDGTNRQAVVKGSL----------PHPFALTLFEDILYWTDWSTHSILACNKYTGE 245 (619)
T ss_dssp EEESSSCCEEC-------------------CCCEEESSSEEEEECTTTCSEEEEESSSCC
T ss_pred EEecCCCCccEEEEeCCC----------CCceEEEEeCCEEEEecCCCCEEEEEECCCCc
Confidence 888886433322222111 22345666655445555566778888776554
No 268
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.11 E-value=5.6e-05 Score=61.94 Aligned_cols=136 Identities=9% Similarity=0.032 Sum_probs=80.9
Q ss_pred CceEEEEe-cCCCEEEEEcC-C----CcEEEEeccCc-eEEEe-cccCCCCeeEEEecCCCCEEEEecCCC-----cee-
Q psy7433 57 GASSLVFA-PQHQLLISAGK-K----GDICVIDLRQR-VIRSR-FNAHESPVKCLAIDPHEEFFVTGAGDG-----DIK- 122 (213)
Q Consensus 57 ~v~~~~~~-~~~~~l~~~~~-d----~~v~iwd~~~~-~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~~~-----~i~- 122 (213)
.+...+|| |||++|+.+.. + ..|+++|+.++ +.+.. +. .....++|+||++.|+....+. .+.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 46788999 99998875432 2 35999999988 63211 11 1235788999998777665542 222
Q ss_pred -------------------eceEEEEEccCCceEEEecC---CCcEEEEEccCCe-ee--eeecCCCCceeEEEecCCCe
Q psy7433 123 -------------------SPVKCLAIDPHEEFFVTGAG---DGDIKVWSLSGNH-LL--YNFPGEHARSSFFKHIGQGV 177 (213)
Q Consensus 123 -------------------~~v~~~~~~~~~~~l~~~~~---dg~i~v~d~~~~~-~~--~~~~~~~~~~~~~~~~~~~v 177 (213)
.....+.|+|||++|+..+. ...|.++|+.++. .. ..+.... ....
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~---------~~~~ 322 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPRE---------KGVR 322 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCC---------TTCC
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCC---------CCce
Confidence 12356789999998776553 3468888887642 11 2222211 1345
Q ss_pred EEEEeCCCCeEEEEe-cC----CcEEEEeCCC
Q psy7433 178 TQLHVDGGSRLFSCG-AD----GSMKVRQLPD 204 (213)
Q Consensus 178 ~~~~~~~~~~l~s~~-~d----~~i~iw~~~~ 204 (213)
..+.|+.++.|+..+ .+ ..|..+++.+
T Consensus 323 ~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 323 YDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp EEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred EEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 666666566544333 32 2566666653
No 269
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.11 E-value=0.0014 Score=49.29 Aligned_cols=161 Identities=15% Similarity=0.128 Sum_probs=94.4
Q ss_pred CCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEE-cCCCcEEEEeccCceEEEecccCCCCeeEEEecCC
Q psy7433 30 ESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISA-GKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPH 108 (213)
Q Consensus 30 ~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (213)
....|+..++. .... ..+.........++|++.+..|+.. ...+.|..+++........+.........+++.+.
T Consensus 94 ~~~~I~~i~~~---~~~~-~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~ 169 (386)
T 3v65_B 94 NRIDIRQVLPH---RSEY-TLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWV 169 (386)
T ss_dssp CBSCEEEECTT---SCCC-EEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETT
T ss_pred cCccceeeccC---CCcE-EEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeC
Confidence 45678888873 2222 2222234557899999865555544 45678999998766543333333334567888875
Q ss_pred CCE-EEEecCCCcee-----------------eceEEEEEccCCceEEEec-CC-CcEEEEEccCCeeeeeecCCCCcee
Q psy7433 109 EEF-FVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGA-GD-GDIKVWSLSGNHLLYNFPGEHARSS 168 (213)
Q Consensus 109 ~~~-l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~-~d-g~i~v~d~~~~~~~~~~~~~~~~~~ 168 (213)
+.. +++-...+.|. .....++++|.+..|.... .+ +.|..+++............
T Consensus 170 ~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~----- 244 (386)
T 3v65_B 170 HDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTH----- 244 (386)
T ss_dssp TTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSS-----
T ss_pred CCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECC-----
Confidence 443 33333333332 4578899998766554443 34 67888887533222222111
Q ss_pred EEEecCCCeEEEEeCC-CCeEE-EEecCCcEEEEeCCC
Q psy7433 169 FFKHIGQGVTQLHVDG-GSRLF-SCGADGSMKVRQLPD 204 (213)
Q Consensus 169 ~~~~~~~~v~~~~~~~-~~~l~-s~~~d~~i~iw~~~~ 204 (213)
....+.++++| +++|+ +-+..+.|..+++..
T Consensus 245 -----~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 245 -----LFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp -----CSCEEEEEEEGGGTEEEEEETTTTEEEEECTTS
T ss_pred -----CCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 14578899986 45554 444567888888764
No 270
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.09 E-value=0.00017 Score=58.22 Aligned_cols=77 Identities=16% Similarity=0.143 Sum_probs=49.9
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEc-CC-----CcEEEEe
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG-KK-----GDICVID 83 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-----~~v~iwd 83 (213)
..++++.+++++++.||. .+..+.+||.... +...+..+... ..-.+++..+++++++.|+ .+ ..+.+||
T Consensus 245 ~~~~~~~~~g~lyv~GG~--~~~~v~~yd~~t~-~W~~~~~~~~~-R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd 320 (656)
T 1k3i_A 245 CPGISMDGNGQIVVTGGN--DAKKTSLYDSSSD-SWIPGPDMQVA-RGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYS 320 (656)
T ss_dssp SCEEEECTTSCEEEECSS--STTCEEEEEGGGT-EEEECCCCSSC-CSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEE
T ss_pred cccccCCCCCCEEEeCCC--CCCceEEecCcCC-ceeECCCCCcc-ccccceEEecCCeEEEEeCcccCCcccccceEeC
Confidence 334677789999999973 5568999997422 22222222211 1224556667899999888 34 4689999
Q ss_pred ccCceEE
Q psy7433 84 LRQRVIR 90 (213)
Q Consensus 84 ~~~~~~~ 90 (213)
..+.+..
T Consensus 321 ~~t~~W~ 327 (656)
T 1k3i_A 321 PSSKTWT 327 (656)
T ss_dssp TTTTEEE
T ss_pred CCCCcce
Confidence 9887543
No 271
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.09 E-value=0.00025 Score=56.28 Aligned_cols=56 Identities=14% Similarity=0.154 Sum_probs=39.0
Q ss_pred CCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEE-eCCCCeEEEEecCCcEEEEeCCCCccc
Q psy7433 142 GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLH-VDGGSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 142 ~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
.+|.|..||+.+++.+-++.... .+.+.. ...++.++.++.|+.++.+|..+++.+
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~~~-----------~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~l 498 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWEKF-----------AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKEL 498 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEESS-----------CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred CCCeEEEEECCCCCEEEEecCCC-----------CccceeEEECCCEEEEEcCCCeEEEEECCCCCEE
Confidence 45789999999888876665432 111111 123677888999999999999988654
No 272
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.09 E-value=0.0002 Score=52.37 Aligned_cols=145 Identities=14% Similarity=0.124 Sum_probs=95.8
Q ss_pred ccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccccccee-eeee----ec--CCceEEEE---ecCCCEEEEE
Q psy7433 4 QCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQ-AFVC----HD--QGASSLVF---APQHQLLISA 73 (213)
Q Consensus 4 ~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~-~~~~----~~--~~v~~~~~---~~~~~~l~~~ 73 (213)
+...-..-+++|.+....|..+. -..++|..|+.. ...... .+.. .+ ..+..+.| .|+++++++.
T Consensus 9 ~~~~~yPE~~~wd~~~g~~~vs~--l~~g~V~~~~~~---~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~ 83 (334)
T 2p9w_A 9 KVKNLTPEDTIYDRTRQVFYQSN--LYKGRIEVYNPK---TQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVM 83 (334)
T ss_dssp CCTTCCCSCEEEETTTTEEEEEE--TTTTEEEEECTT---TCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEE
T ss_pred cCcccCCcCccCcCCCCEEEEEe--ccCCEEEEEcCC---CCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEE
Confidence 33444556789988555444442 478999999973 222211 2221 01 13578999 6887776654
Q ss_pred c-------------CCCcEEEEecc---CceEEEecc--c-----------CCCCeeEEEecCCCCEEEEecCC-Ccee-
Q psy7433 74 G-------------KKGDICVIDLR---QRVIRSRFN--A-----------HESPVKCLAIDPHEEFFVTGAGD-GDIK- 122 (213)
Q Consensus 74 ~-------------~d~~v~iwd~~---~~~~~~~~~--~-----------~~~~i~~~~~~~~~~~l~~~~~~-~~i~- 122 (213)
. .+..|..||+. +++.+.... . .......++..++|+..++++.. +.|.
T Consensus 84 ~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~r 163 (334)
T 2p9w_A 84 KNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIAR 163 (334)
T ss_dssp EETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEE
T ss_pred cccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEE
Confidence 3 25779999998 776554332 1 11247899999999988877766 5543
Q ss_pred ---------------------eceEEEEEccCCceEEEecCCCcEEEEEccC
Q psy7433 123 ---------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSG 153 (213)
Q Consensus 123 ---------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~ 153 (213)
...+.|+++|+++.|++....|.+..+|++.
T Consensus 164 V~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 164 VSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp ECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred EeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 1245899999999888776699999999874
No 273
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.08 E-value=0.00027 Score=57.38 Aligned_cols=180 Identities=13% Similarity=0.163 Sum_probs=103.8
Q ss_pred CCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCC----------c-eEEEEecCCCEEEEEcCCCcEEEEeccCc
Q psy7433 19 CSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQG----------A-SSLVFAPQHQLLISAGKKGDICVIDLRQR 87 (213)
Q Consensus 19 ~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~----------v-~~~~~~~~~~~l~~~~~d~~v~iwd~~~~ 87 (213)
+..++.+ +.++.|..+|. .+++.+..+...... + ..+.. .+..++.++.|+.|..+|.++|
T Consensus 70 ~g~vyv~---~~~~~v~AlD~---~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG 141 (689)
T 1yiq_A 70 DGVMYTT---GPFSVVYALDA---RDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTG 141 (689)
T ss_dssp TTEEEEE---CGGGCEEEEET---TTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEE---cCCCeEEEEEC---CCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCC
Confidence 3345555 46889999998 566666655432110 0 11222 3567888889999999999999
Q ss_pred eEEEecccC--CCCeeEEEecC---CCCEEEEecC------CCcee-------------ec-------------------
Q psy7433 88 VIRSRFNAH--ESPVKCLAIDP---HEEFFVTGAG------DGDIK-------------SP------------------- 124 (213)
Q Consensus 88 ~~~~~~~~~--~~~i~~~~~~~---~~~~l~~~~~------~~~i~-------------~~------------------- 124 (213)
+.+-.+... ......+..+| ++. ++++.. ++.+. ..
T Consensus 142 ~~~W~~~~~~~~~~~~~~~~sP~v~~g~-v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~ 220 (689)
T 1yiq_A 142 QRAWSVDTRADHKRSYTITGAPRVVNGK-VVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAK 220 (689)
T ss_dssp CEEEEEECCSCTTSCCBCCSCCEEETTE-EEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHT
T ss_pred CEeeeecCcCCCCCCccccCCcEEECCE-EEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCccccccccccccccc
Confidence 887665432 11111111122 232 333221 23332 00
Q ss_pred ----------------eEEEEEccCCceEEEecCCCc-------------------EEEEEccCCeeeeeecCCCCceeE
Q psy7433 125 ----------------VKCLAIDPHEEFFVTGAGDGD-------------------IKVWSLSGNHLLYNFPGEHARSSF 169 (213)
Q Consensus 125 ----------------v~~~~~~~~~~~l~~~~~dg~-------------------i~v~d~~~~~~~~~~~~~~~~~~~ 169 (213)
...++++|+..+++.++.++. |..+|.++++.+-.++........
T Consensus 221 ~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd 300 (689)
T 1yiq_A 221 TWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWD 300 (689)
T ss_dssp TCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSC
T ss_pred ccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCccccc
Confidence 014678888888888887763 999999999998777642110000
Q ss_pred EEecCCCeEEEEeCCCC----eEEEEecCCcEEEEeCCCCccc
Q psy7433 170 FKHIGQGVTQLHVDGGS----RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 170 ~~~~~~~v~~~~~~~~~----~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
+.. ..++.......++ .++.++.+|.++++|..+++.+
T Consensus 301 ~~~-~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 342 (689)
T 1yiq_A 301 YTA-TQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELL 342 (689)
T ss_dssp CCC-CSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred ccC-CCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEe
Confidence 000 0112111211122 5888999999999999998765
No 274
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.06 E-value=0.00065 Score=54.03 Aligned_cols=57 Identities=11% Similarity=0.186 Sum_probs=39.2
Q ss_pred CCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCccc
Q psy7433 142 GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 142 ~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
.+|.|..||+.+++.+-+....... .+..+ ...++.++.++.|+.++.||.++++.+
T Consensus 464 ~~G~l~A~D~~tG~~~W~~~~~~~~------~~g~~----~tagglvf~g~~dg~l~A~D~~tG~~l 520 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWEHKEHLPL------WAGVL----ATAGNLVFTGTGDGYFKAFDAKSGKEL 520 (582)
T ss_dssp CSEEEEEECTTTCCEEEEEEESSCC------CSCCE----EETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred CcceEEEEECCCCCEEEEecCCCCC------cccce----EeCCCEEEEECCCCcEEEEECCCCCEE
Confidence 3578999999998887665532210 00111 123678888999999999999998755
No 275
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.05 E-value=0.00037 Score=55.58 Aligned_cols=163 Identities=16% Similarity=0.165 Sum_probs=89.7
Q ss_pred ccEEEEeCCCcccccceeeeeeecCC---------ceEEEEe-cCC---CEEEEEcCCCcEEEEeccCceEEEecccCC-
Q psy7433 32 KNVCLWDSLLPQKKALVQAFVCHDQG---------ASSLVFA-PQH---QLLISAGKKGDICVIDLRQRVIRSRFNAHE- 97 (213)
Q Consensus 32 ~~i~iwd~~~~~~~~~~~~~~~~~~~---------v~~~~~~-~~~---~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~- 97 (213)
+.|..+|. .+++.+..++..... ..-+... .+| ..++.++.+|.+.++|.++++.+...+...
T Consensus 278 ~sv~Ald~---~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~ 354 (599)
T 1w6s_A 278 MTIFGRDA---DTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDT 354 (599)
T ss_dssp SEEEEEET---TTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTT
T ss_pred ceEEEEeC---CCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCC
Confidence 47888898 556666655532211 1112222 467 467778899999999999998876554211
Q ss_pred ------------CCe--------------------------eEEEecCCCCEEEEecCCCceeeceEEEEEccCCc-e--
Q psy7433 98 ------------SPV--------------------------KCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEE-F-- 136 (213)
Q Consensus 98 ------------~~i--------------------------~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~-~-- 136 (213)
.++ ..++++|+...+.+...+.........+.+. .+. +
T Consensus 355 ~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~-~g~~~~g 433 (599)
T 1w6s_A 355 VNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYK-AGQFFVG 433 (599)
T ss_dssp CCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCC-TTSCCCC
T ss_pred cccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeeccccccc-CCcceec
Confidence 111 2345666655555443221110000000000 111 1
Q ss_pred ----EEE--ec------CCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCC
Q psy7433 137 ----FVT--GA------GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 137 ----l~~--~~------~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~ 204 (213)
+.. .+ ..|.|..||+.+++.+-..+... ..........++.++.++.|+.++.||..+
T Consensus 434 ~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~----------~~~~g~~~tagg~vf~gt~dg~l~A~D~~t 503 (599)
T 1w6s_A 434 ATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERF----------AVWGGTMATAGDLVFYGTLDGYLKARDSDT 503 (599)
T ss_dssp EEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESS----------CCCSBCEEETTTEEEEECTTSEEEEEETTT
T ss_pred ccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCC----------CccCcceEecCCEEEEECCCCeEEEEECCC
Confidence 111 01 35789999999988776664321 001111112367888899999999999999
Q ss_pred Cccc
Q psy7433 205 RDAV 208 (213)
Q Consensus 205 ~~~~ 208 (213)
++.+
T Consensus 504 G~~l 507 (599)
T 1w6s_A 504 GDLL 507 (599)
T ss_dssp CCEE
T ss_pred CCEE
Confidence 8754
No 276
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.02 E-value=0.0017 Score=47.13 Aligned_cols=175 Identities=9% Similarity=0.056 Sum_probs=97.1
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC--CcEEEEecc
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK--GDICVIDLR 85 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~v~iwd~~ 85 (213)
.....++|+++++++++- ..++.|..||.+ ......+. .......+++.++++++++.... ..|..+|..
T Consensus 32 ~~pegia~~~~g~lyv~d---~~~~~I~~~d~~----g~~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~ 103 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTN---HEVGEIVSITPD----GNQQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKS 103 (306)
T ss_dssp CCEEEEEECTTSCEEEEE---TTTTEEEEECTT----CCEEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECT
T ss_pred CCcceEEECCCCCEEEEe---CCCCeEEEECCC----CceEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCC
Confidence 456789999999977776 578899999863 22222222 23467889999999866554332 246667777
Q ss_pred CceEEEeccc-CCCCeeEEEecCCCCEEEEecCCCcee---------------------------eceEEEEEccCCceE
Q psy7433 86 QRVIRSRFNA-HESPVKCLAIDPHEEFFVTGAGDGDIK---------------------------SPVKCLAIDPHEEFF 137 (213)
Q Consensus 86 ~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------------------~~v~~~~~~~~~~~l 137 (213)
+++....... .......++..+.+..+++-..++.+. .....+ +|++++|
T Consensus 104 ~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~l 181 (306)
T 2p4o_A 104 DGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFL 181 (306)
T ss_dssp TSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEE
T ss_pred CCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEE
Confidence 7654322211 111223333333333232222233222 122334 7777654
Q ss_pred -EEecCCCcEEEEEccC-Cee--eeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEE-ecCCcEEEEeCC
Q psy7433 138 -VTGAGDGDIKVWSLSG-NHL--LYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSC-GADGSMKVRQLP 203 (213)
Q Consensus 138 -~~~~~dg~i~v~d~~~-~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~-~~d~~i~iw~~~ 203 (213)
++-...+.|..||+.. +.. ...+. . ......+++++++.|..+ ...+.|.+++..
T Consensus 182 yv~d~~~~~I~~~~~~~~g~~~~~~~~~----------~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 182 YVSNTEKMLLLRIPVDSTDKPGEPEIFV----------E-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD 241 (306)
T ss_dssp EEEETTTTEEEEEEBCTTSCBCCCEEEE----------E-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT
T ss_pred EEEeCCCCEEEEEEeCCCCCCCccEEEe----------c-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC
Confidence 4445678899999864 221 00000 0 123456788877665444 456788888865
No 277
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.02 E-value=0.0024 Score=48.86 Aligned_cols=188 Identities=10% Similarity=0.081 Sum_probs=104.5
Q ss_pred CceEEEEEeCCCCeEEEeeccCCC----ccEEEEeCCCcccccceeeeeeecCCceEEEEec-CCCEEEEEcCCCcEEEE
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSES----KNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP-QHQLLISAGKKGDICVI 82 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~----~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~iw 82 (213)
.....++++++|+++++- ..+ ..+...+.. ........+. .......++++| ++.+.++-..++.|..+
T Consensus 182 ~~P~giavd~dG~lyVad---~~~~~~~~gv~~~~~~--~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~ 255 (433)
T 4hw6_A 182 GQCADVNFTLNGDMVVVD---DQSSDTNTGIYLFTRA--SGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSY 255 (433)
T ss_dssp SCEEEEEECTTCCEEEEE---CCSCTTSEEEEEECGG--GTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEE
T ss_pred CCccEEEECCCCCEEEEc---CCCCcccceEEEEECC--CCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEE
Confidence 457899999999955554 211 123333321 1111111222 334567789999 67666566677889999
Q ss_pred eccCceEEEec-cc-CCCCeeEEEecCCCCEEEEec-CCCcee------------------------------------e
Q psy7433 83 DLRQRVIRSRF-NA-HESPVKCLAIDPHEEFFVTGA-GDGDIK------------------------------------S 123 (213)
Q Consensus 83 d~~~~~~~~~~-~~-~~~~i~~~~~~~~~~~l~~~~-~~~~i~------------------------------------~ 123 (213)
|..++.....+ .. .......++++|+++.|..+. ..+.|. .
T Consensus 256 d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~ 335 (433)
T 4hw6_A 256 DPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLW 335 (433)
T ss_dssp CTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCS
T ss_pred ECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEc
Confidence 98877552222 11 122234699999998554443 333332 1
Q ss_pred ceEEEEE---------ccCCceEEEecCCCcEEEEEccCCeeeeeecCCCC---ce-eE----EEecCCCeEEEEeC-CC
Q psy7433 124 PVKCLAI---------DPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHA---RS-SF----FKHIGQGVTQLHVD-GG 185 (213)
Q Consensus 124 ~v~~~~~---------~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~---~~-~~----~~~~~~~v~~~~~~-~~ 185 (213)
....+++ .+++.++++-..++.|+.++. ++... ++.+... .. .. ....-.....++++ ++
T Consensus 336 ~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~-t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~ 413 (433)
T 4hw6_A 336 GPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVT-TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKR 413 (433)
T ss_dssp SEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEE-EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTT
T ss_pred CCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCEE-EEEeCCCCCccccCCCccccccEeCCCcEEEEECCC
Confidence 2445788 667777777777788888884 44333 2222110 00 00 00011357889998 56
Q ss_pred CeEEEEe-cCCcEEEEeCC
Q psy7433 186 SRLFSCG-ADGSMKVRQLP 203 (213)
Q Consensus 186 ~~l~s~~-~d~~i~iw~~~ 203 (213)
+.|+.+. ..+.|+.+++.
T Consensus 414 g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 414 KCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TEEEEEEGGGTEEEEEEEC
T ss_pred CEEEEEeCCCCEEEEEecC
Confidence 6655544 56678877754
No 278
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.99 E-value=0.0016 Score=49.23 Aligned_cols=109 Identities=11% Similarity=0.111 Sum_probs=75.7
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccc---------cceeeeee------ecCCceEEEEec---CCCEE
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKK---------ALVQAFVC------HDQGASSLVFAP---QHQLL 70 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~---------~~~~~~~~------~~~~v~~~~~~~---~~~~l 70 (213)
.|..+..+|+|++||..| +..|.|-.+..+... -..+.++- ...+|..+.|+| ++..|
T Consensus 67 ~i~qlvlSpsG~lLAl~g----~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~L 142 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFN----DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCI 142 (452)
T ss_dssp TTCEEEECTTSSEEEEEC----SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEE
T ss_pred ceeEEEECCCCCEEEEec----CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeE
Confidence 577899999999999994 678999888421100 11122321 246799999999 45678
Q ss_pred EEEcCCCcEEEEeccCc--eEEEec---------ccCCCCeeEEEecCCCCEEEEe--cCCCcee
Q psy7433 71 ISAGKKGDICVIDLRQR--VIRSRF---------NAHESPVKCLAIDPHEEFFVTG--AGDGDIK 122 (213)
Q Consensus 71 ~~~~~d~~v~iwd~~~~--~~~~~~---------~~~~~~i~~~~~~~~~~~l~~~--~~~~~i~ 122 (213)
++-..|+.|++||+... ++. .+ ......+.+++|.+++-.|... .+.|.|.
T Consensus 143 VVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIY 206 (452)
T 3pbp_A 143 VVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIF 206 (452)
T ss_dssp EEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEE
T ss_pred EEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEE
Confidence 88889999999999752 222 22 1223568899999988777774 4778775
No 279
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.93 E-value=0.0022 Score=45.28 Aligned_cols=138 Identities=8% Similarity=0.101 Sum_probs=82.7
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee------eecCCceEEEEecCCCEEEEEcCCCcEEEE
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV------CHDQGASSLVFAPQHQLLISAGKKGDICVI 82 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~d~~v~iw 82 (213)
..-.|++.+++.++++. -.++.+.++++........+.... ..+.....++|+|.++.|+++.......+|
T Consensus 71 D~EGIa~~~~g~~~vs~---E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~ 147 (255)
T 3qqz_A 71 DLETIEYIGDNQFVISD---ERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVY 147 (255)
T ss_dssp SEEEEEECSTTEEEEEE---TTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEE
T ss_pred ChHHeEEeCCCEEEEEE---CCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEE
Confidence 45577888888876665 467889998874322111122221 234557899999998888777766566666
Q ss_pred eccC---ceEEEec-------ccCCCCeeEEEecCCCCEEEEecC-CCcee-------------------------eceE
Q psy7433 83 DLRQ---RVIRSRF-------NAHESPVKCLAIDPHEEFFVTGAG-DGDIK-------------------------SPVK 126 (213)
Q Consensus 83 d~~~---~~~~~~~-------~~~~~~i~~~~~~~~~~~l~~~~~-~~~i~-------------------------~~v~ 126 (213)
.++. ...+..+ ......+..++++|....+++.+. .+.+. ....
T Consensus 148 ~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpE 227 (255)
T 3qqz_A 148 KVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAE 227 (255)
T ss_dssp EEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEE
T ss_pred EEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCC
Confidence 6541 1111111 112335789999996554444443 33332 3678
Q ss_pred EEEEccCCceEEEecCCCcEEEEE
Q psy7433 127 CLAIDPHEEFFVTGAGDGDIKVWS 150 (213)
Q Consensus 127 ~~~~~~~~~~l~~~~~dg~i~v~d 150 (213)
.|+|+++|+++++ ++.+.++.|.
T Consensus 228 Gia~d~~G~lyIv-sE~n~~y~f~ 250 (255)
T 3qqz_A 228 GVAMDASGNIYIV-SEPNRFYRFT 250 (255)
T ss_dssp EEEECTTCCEEEE-ETTTEEEEEE
T ss_pred eeEECCCCCEEEE-cCCceEEEEE
Confidence 8999999985444 6666666554
No 280
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.91 E-value=0.0029 Score=46.19 Aligned_cols=161 Identities=16% Similarity=0.127 Sum_probs=92.1
Q ss_pred CCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEE-cCCCcEEEEeccC----ceEEEecccCCCCeeEEE
Q psy7433 30 ESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISA-GKKGDICVIDLRQ----RVIRSRFNAHESPVKCLA 104 (213)
Q Consensus 30 ~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~v~iwd~~~----~~~~~~~~~~~~~i~~~~ 104 (213)
....|+..|+. .......+. .......++|++.++.|+.+ ..++.|..+++.. ......+.........++
T Consensus 8 ~~~~I~~i~~~---~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~gla 83 (316)
T 1ijq_A 8 NRHEVRKMTLD---RSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLA 83 (316)
T ss_dssp CBSSEEEEETT---SCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEE
T ss_pred CCCeEEEEECC---CcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEE
Confidence 45779999984 222222222 34567899999866555544 4568899999876 222222322223457888
Q ss_pred ecCCCC-EEEEecCCCcee-----------------eceEEEEEccCCceEEEecC-C-CcEEEEEccCCeeeeeecCCC
Q psy7433 105 IDPHEE-FFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAG-D-GDIKVWSLSGNHLLYNFPGEH 164 (213)
Q Consensus 105 ~~~~~~-~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~-d-g~i~v~d~~~~~~~~~~~~~~ 164 (213)
+++.+. .+++-...+.|. ..+..++++|.+..|..+.. . +.|..+++... ....+....
T Consensus 84 vd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~-~~~~~~~~~ 162 (316)
T 1ijq_A 84 VDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTEN 162 (316)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEEECSS
T ss_pred EeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC-CeEEEEECC
Confidence 886444 333433333332 45678899986665544443 2 67888877432 222221111
Q ss_pred CceeEEEecCCCeEEEEeCC-CCeEEEE-ecCCcEEEEeCCC
Q psy7433 165 ARSSFFKHIGQGVTQLHVDG-GSRLFSC-GADGSMKVRQLPD 204 (213)
Q Consensus 165 ~~~~~~~~~~~~v~~~~~~~-~~~l~s~-~~d~~i~iw~~~~ 204 (213)
......+++++ +++|+.+ +..+.|..+|+..
T Consensus 163 ---------~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 163 ---------IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp ---------CSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred ---------CCCceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence 14678899997 4555444 4567888888864
No 281
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.91 E-value=0.0022 Score=49.08 Aligned_cols=138 Identities=9% Similarity=0.065 Sum_probs=88.2
Q ss_pred CceEEEEecC--CCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCC-----cee-------
Q psy7433 57 GASSLVFAPQ--HQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDG-----DIK------- 122 (213)
Q Consensus 57 ~v~~~~~~~~--~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~-----~i~------- 122 (213)
....++|+|+ ...|+.+...+.|+.+|..+++...... .......++++++++.+++..... .+.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCe
Confidence 3568999984 4456666555899999998877654433 445688999999999554443211 111
Q ss_pred ---------eceEEEEEcc-CCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EE-E
Q psy7433 123 ---------SPVKCLAIDP-HEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LF-S 190 (213)
Q Consensus 123 ---------~~v~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~-s 190 (213)
.....++++| ++.++++-..++.|+.+|..++.....+..... ...-..++++|++. |+ +
T Consensus 219 ~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~--------~~~~~~ia~dpdG~~LYva 290 (433)
T 4hw6_A 219 TERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDT--------KGSNFHIVWHPTGDWAYII 290 (433)
T ss_dssp CCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSC--------CSSCEEEEECTTSSEEEEE
T ss_pred eccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCC--------CCCcccEEEeCCCCEEEEE
Confidence 2346688898 666666666778899999876654222211110 02234699999653 54 4
Q ss_pred EecCCcEEEEeCC
Q psy7433 191 CGADGSMKVRQLP 203 (213)
Q Consensus 191 ~~~d~~i~iw~~~ 203 (213)
-...+.|+.+++.
T Consensus 291 d~~~~~I~~~~~d 303 (433)
T 4hw6_A 291 YNGKHCIYRVDYN 303 (433)
T ss_dssp ETTTTEEEEEEBC
T ss_pred eCCCCEEEEEeCC
Confidence 4456789988865
No 282
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.89 E-value=0.0034 Score=46.06 Aligned_cols=175 Identities=11% Similarity=0.061 Sum_probs=98.9
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEE-EEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEec--
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVC-LWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL-- 84 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~-iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~-- 84 (213)
+.+..+.+.++++.++.+ .++.|. -.|- ..+...+. ......+..+.+.+++.+++.+...+..+-.|-
T Consensus 122 ~~~~~i~~~~~~~~~~~~----~~g~v~~S~Dg--G~tW~~~~--~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG 193 (327)
T 2xbg_A 122 GSPRLIKALGNGSAEMIT----NVGAIYRTKDS--GKNWQALV--QEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQ 193 (327)
T ss_dssp SCEEEEEEEETTEEEEEE----TTCCEEEESST--TSSEEEEE--CSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTC
T ss_pred CCeEEEEEECCCCEEEEe----CCccEEEEcCC--CCCCEEee--cCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCC
Confidence 457788887777777776 355442 2221 22222222 123456888999998887777654433434442
Q ss_pred cCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee---------------------eceEEEEEccCCceEEEecCC
Q psy7433 85 RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------------SPVKCLAIDPHEEFFVTGAGD 143 (213)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------------~~v~~~~~~~~~~~l~~~~~d 143 (213)
.+.+.+. ......+..+.+.+++..++++. ++.+. ..+..+.+.+++.+++++. +
T Consensus 194 ~tW~~~~--~~~~~~~~~~~~~~~g~~~~~~~-~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~ 269 (327)
T 2xbg_A 194 TAWEPHN--RTTSRRLHNMGFTPDGRLWMIVN-GGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-A 269 (327)
T ss_dssp SSCEEEE--CCSSSCEEEEEECTTSCEEEEET-TTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-T
T ss_pred CceeECC--CCCCCccceeEECCCCCEEEEeC-CceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-C
Confidence 2334332 22345678888888877655442 22111 1367888888777666654 5
Q ss_pred CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeC
Q psy7433 144 GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQL 202 (213)
Q Consensus 144 g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~ 202 (213)
|.+ .+....++.-..+...... ...+..+.+.+++.+++++.+|.|.-++-
T Consensus 270 g~i-~~S~DgG~tW~~~~~~~~~-------~~~~~~v~~~~~~~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 270 GAL-LCSQDGGQTWQQDVDVKKV-------PSNFYKILFFSPDQGFILGQKGILLRYVT 320 (327)
T ss_dssp TCE-EEESSTTSSCEECGGGTTS-------SSCCCEEEEEETTEEEEECSTTEEEEECC
T ss_pred CeE-EEeCCCCcccEEcCccCCC-------CCCeEEEEEECCCceEEEcCCceEEEEcC
Confidence 655 3333334333322211000 03567788876777888889997776653
No 283
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.88 E-value=0.0061 Score=48.95 Aligned_cols=183 Identities=13% Similarity=-0.026 Sum_probs=108.5
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEE-EEcCCCcEEEEeccC
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLI-SAGKKGDICVIDLRQ 86 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~iwd~~~ 86 (213)
+.+.+++|++.+..|..+. ..++.|..++++ .......+.........+++.+.+..|+ +-...+.|.+.++..
T Consensus 37 ~~~~~l~~d~~~~~lywtD--~~~~~I~r~~~~---g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG 111 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTD--ISLKTISRAFMN---GSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDG 111 (628)
T ss_dssp SCEEEEEEETTTTEEEEEE--TTTTEEEEEETT---SCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CceEEEEEECCCCEEEEEE--CCCCeEEEEECC---CCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCC
Confidence 4577899998665555442 467889988873 1112222222224567899987655554 445567899999875
Q ss_pred ceEEEecccCCCCeeEEEecCCCCEEEEecC--CCcee----------------eceEEEEEccCCceEEEe-cCCCcEE
Q psy7433 87 RVIRSRFNAHESPVKCLAIDPHEEFFVTGAG--DGDIK----------------SPVKCLAIDPHEEFFVTG-AGDGDIK 147 (213)
Q Consensus 87 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--~~~i~----------------~~v~~~~~~~~~~~l~~~-~~dg~i~ 147 (213)
......+...-.....+++.|....|..... .+.|. ..+..++++++++.|..+ ...+.|.
T Consensus 112 ~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~ 191 (628)
T 4a0p_A 112 QHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIE 191 (628)
T ss_dssp TTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEE
T ss_pred CcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEE
Confidence 4322222233455789999985444443331 23332 567889999976655555 4567899
Q ss_pred EEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCc
Q psy7433 148 VWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 148 v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 206 (213)
.+|+..... ..+... .....++++..+..+.+-...+.|...|..++.
T Consensus 192 ~~d~dG~~~-~v~~~~----------l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 192 SSNMLGLNR-EVIADD----------LPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp EEETTSCSC-EEEEEC----------CSCEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred EEcCCCCce-EEeecc----------CCCceEEEEECCEEEEecCCCCEEEEEECCCCC
Confidence 998854322 122111 134557777664445555557788888765543
No 284
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.86 E-value=0.0039 Score=46.01 Aligned_cols=172 Identities=10% Similarity=0.182 Sum_probs=102.0
Q ss_pred CCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec----CCC---EEEEEc-C--CCcEEEEecc--C
Q psy7433 19 CSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP----QHQ---LLISAG-K--KGDICVIDLR--Q 86 (213)
Q Consensus 19 ~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~---~l~~~~-~--d~~v~iwd~~--~ 86 (213)
..+++.. ...+-+.+||+ .++.+..+.. +.++.+..-| .++ ++++.. . +++|.+|++. +
T Consensus 40 ~s~ii~t---~k~~gL~Vydl----~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~ 110 (355)
T 3amr_A 40 NSKLITT---NKKSGLVVYSL----DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKN 110 (355)
T ss_dssp GCEEEEE---ETTTEEEEEET----TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTT
T ss_pred ccEEEEE---cCCCCEEEEcC----CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCC
Confidence 3445544 47789999997 5666666542 4455555544 232 223333 3 5789999773 3
Q ss_pred ceEEEeccc------CC-CCeeEEEe--cCC-CC-EEEEecCCCcee-----------------------eceEEEEEcc
Q psy7433 87 RVIRSRFNA------HE-SPVKCLAI--DPH-EE-FFVTGAGDGDIK-----------------------SPVKCLAIDP 132 (213)
Q Consensus 87 ~~~~~~~~~------~~-~~i~~~~~--~~~-~~-~l~~~~~~~~i~-----------------------~~v~~~~~~~ 132 (213)
++ +..+.. .. ..+..+++ +|. +. ++++...++.+. ..+..+..++
T Consensus 111 ~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd 189 (355)
T 3amr_A 111 GT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADD 189 (355)
T ss_dssp CC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEET
T ss_pred Cc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcC
Confidence 33 444421 11 45666777 664 43 455556666543 6677788888
Q ss_pred CCceEEEecCCCcEEEEEcc-----CCeeeeeecCCCCceeEEEecCCCeEEEEeC--CC--CeEEEEe-cCCcEEEEeC
Q psy7433 133 HEEFFVTGAGDGDIKVWSLS-----GNHLLYNFPGEHARSSFFKHIGQGVTQLHVD--GG--SRLFSCG-ADGSMKVRQL 202 (213)
Q Consensus 133 ~~~~l~~~~~dg~i~v~d~~-----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~--~~l~s~~-~d~~i~iw~~ 202 (213)
....|..+-++.-|..+|.+ +.+.+..+..... ...+..+++. ++ ++|++.+ .++++.+||.
T Consensus 190 ~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l--------~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr 261 (355)
T 3amr_A 190 EYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHL--------TRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDR 261 (355)
T ss_dssp TTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSB--------CSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEES
T ss_pred CCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCcc--------ccCcceEEEEecCCCCEEEEEEcCCCCEEEEEEC
Confidence 88889999888666666654 2345544432211 1367888874 32 3555555 6779999999
Q ss_pred CCCccc
Q psy7433 203 PDRDAV 208 (213)
Q Consensus 203 ~~~~~~ 208 (213)
.....+
T Consensus 262 ~~~~~~ 267 (355)
T 3amr_A 262 QGKNKY 267 (355)
T ss_dssp STTCCE
T ss_pred CCCCcE
Confidence 743333
No 285
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.80 E-value=0.0056 Score=46.35 Aligned_cols=166 Identities=12% Similarity=0.139 Sum_probs=93.5
Q ss_pred EeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeee----cCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEE
Q psy7433 15 FLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCH----DQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIR 90 (213)
Q Consensus 15 ~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~ 90 (213)
...+|.-++.+ .++.||.-++.. ....+.+... ...+..+..+|+|++||..+. ..|.+-.+..+...
T Consensus 28 ~~~n~t~i~~a----~~n~iR~~~i~~---~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~ 99 (452)
T 3pbp_A 28 SSQNGTRIVFI----QDNIIRWYNVLT---DSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSN 99 (452)
T ss_dssp EETTTTEEEEE----ETTEEEEEETTT---CSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSC
T ss_pred EEcCCCEEEEE----ECCEEEEEECCC---CCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCcccc
Confidence 34456666655 567788778742 2233333322 236888999999999998865 58888888743211
Q ss_pred EecccCCCCee--EEEecCCCCEEEEecCCCceeeceEEEEEccC---CceEEEecCCCcEEEEEccCC--eeeeeecCC
Q psy7433 91 SRFNAHESPVK--CLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPH---EEFFVTGAGDGDIKVWSLSGN--HLLYNFPGE 163 (213)
Q Consensus 91 ~~~~~~~~~i~--~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~---~~~l~~~~~dg~i~v~d~~~~--~~~~~~~~~ 163 (213)
..-.....++. .....|. ......+|..+.|||- +..|++-..|+.|++||+... ++. .+...
T Consensus 100 ~~~~~~~~~~q~~ty~l~~~---------~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~ 169 (452)
T 3pbp_A 100 VEDVSIQDAFQIFHYSIDEE---------EVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKP 169 (452)
T ss_dssp CCCHHHHHTTEEEEEEGGGC---------C--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCC
T ss_pred CcccccccccceeEEEcCCc---------ccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhcc
Confidence 00000001122 2222221 1122467888889885 447889999999999999642 222 33211
Q ss_pred CCceeEEEecCCCeEEEEeCCCCe-EEE--EecCCcEEE
Q psy7433 164 HARSSFFKHIGQGVTQLHVDGGSR-LFS--CGADGSMKV 199 (213)
Q Consensus 164 ~~~~~~~~~~~~~v~~~~~~~~~~-l~s--~~~d~~i~i 199 (213)
.. .--.......|.+++|..++. |.. ...+|.|+-
T Consensus 170 ~~-~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 170 NN-SFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp CS-EEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEE
T ss_pred cc-ccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEE
Confidence 10 000111125788999988764 444 446676653
No 286
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.80 E-value=0.0046 Score=44.83 Aligned_cols=168 Identities=13% Similarity=0.053 Sum_probs=91.6
Q ss_pred CceEEEEEeCCCCeEEEeeccCCC-ccEEEEeCCCcccccceeeeee-ecCCceEEEEecCCCEEEEEcCCCcEEEEecc
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSES-KNVCLWDSLLPQKKALVQAFVC-HDQGASSLVFAPQHQLLISAGKKGDICVIDLR 85 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~-~~i~iwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~ 85 (213)
..+..+++.++|+++++.. ..+ ..|..++.. .++....... .......++..+++..+++-..++.|..+|..
T Consensus 72 ~~p~gia~~~dG~l~vad~--~~~~~~v~~~d~~---~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~ 146 (306)
T 2p4o_A 72 GKVSGLAFTSNGDLVATGW--NADSIPVVSLVKS---DGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVV 146 (306)
T ss_dssp SEEEEEEECTTSCEEEEEE--CTTSCEEEEEECT---TSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETT
T ss_pred CCceeEEEcCCCcEEEEec--cCCcceEEEEcCC---CCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCC
Confidence 4577899999999766652 122 246666652 2222111111 11222445555555445555467889999887
Q ss_pred CceE-EEec---------ccCCCCeeEEEecCCCCEEEEec-CCCcee-------------------eceEEEEEccCCc
Q psy7433 86 QRVI-RSRF---------NAHESPVKCLAIDPHEEFFVTGA-GDGDIK-------------------SPVKCLAIDPHEE 135 (213)
Q Consensus 86 ~~~~-~~~~---------~~~~~~i~~~~~~~~~~~l~~~~-~~~~i~-------------------~~v~~~~~~~~~~ 135 (213)
+++. +... ...-.....+ +|+++.+.++. ..+.+. .....++++++|+
T Consensus 147 ~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~ 224 (306)
T 2p4o_A 147 QPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGN 224 (306)
T ss_dssp TTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCC
T ss_pred CCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCC
Confidence 5421 1100 0111223445 67776554443 333332 2356688899998
Q ss_pred eEEEecCCCcEEEEEccCCeee--eeecCCCCceeEEEecCCCeEEEEeC---CC-CeEEEEec
Q psy7433 136 FFVTGAGDGDIKVWSLSGNHLL--YNFPGEHARSSFFKHIGQGVTQLHVD---GG-SRLFSCGA 193 (213)
Q Consensus 136 ~l~~~~~dg~i~v~d~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~---~~-~~l~s~~~ 193 (213)
++++....+.|.++|.. ++.. ..+.... ...++++|. |+ +.|+....
T Consensus 225 l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~----------~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 225 LYGATHIYNSVVRIAPD-RSTTIIAQAEQGV----------IGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp EEEECBTTCCEEEECTT-CCEEEEECGGGTC----------TTEEEEEECCSTTTTTEEEEEEC
T ss_pred EEEEeCCCCeEEEECCC-CCEEEEeeccccc----------CCceEEEEecccCCCCEEEEECC
Confidence 77777778899999875 4432 2232221 458899997 65 45554443
No 287
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.79 E-value=0.0061 Score=46.11 Aligned_cols=162 Identities=14% Similarity=0.118 Sum_probs=94.0
Q ss_pred CCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEE-cCCCcEEEEeccCc----eEEEecccCCCCeeEEE
Q psy7433 30 ESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISA-GKKGDICVIDLRQR----VIRSRFNAHESPVKCLA 104 (213)
Q Consensus 30 ~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~v~iwd~~~~----~~~~~~~~~~~~i~~~~ 104 (213)
....|+..++. .... ..+......+..++|++....|+.. ...+.|..+++... .....+.........++
T Consensus 90 ~~~~I~~i~l~---~~~~-~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~gla 165 (400)
T 3p5b_L 90 NRHEVRKMTLD---RSEY-TSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLA 165 (400)
T ss_dssp ETTEEEEECTT---SCSC-EEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEE
T ss_pred ccceeEEEccC---Ccce-eEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEE
Confidence 35788888873 2222 2222344568899999866656555 45678888888652 22222332344567888
Q ss_pred ecCC-CCEEEEecCCCcee-----------------eceEEEEEccCCceEEEec--CCCcEEEEEccCCeeeeeecCCC
Q psy7433 105 IDPH-EEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGA--GDGDIKVWSLSGNHLLYNFPGEH 164 (213)
Q Consensus 105 ~~~~-~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~--~dg~i~v~d~~~~~~~~~~~~~~ 164 (213)
+.+. ++.+++-...+.|. ..+..++++|.+.+|.... ..+.|...++............-
T Consensus 166 vD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l 245 (400)
T 3p5b_L 166 VDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENI 245 (400)
T ss_dssp EETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSC
T ss_pred EEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCC
Confidence 8874 44444444444443 4477889998766555544 24678888875332222222111
Q ss_pred CceeEEEecCCCeEEEEeCC-CCeEEEE-ecCCcEEEEeCCCC
Q psy7433 165 ARSSFFKHIGQGVTQLHVDG-GSRLFSC-GADGSMKVRQLPDR 205 (213)
Q Consensus 165 ~~~~~~~~~~~~v~~~~~~~-~~~l~s~-~~d~~i~iw~~~~~ 205 (213)
.....+++++ +++|+.+ +..+.|..+|+...
T Consensus 246 ----------~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (400)
T 3p5b_L 246 ----------QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 278 (400)
T ss_dssp ----------SCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred ----------CceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC
Confidence 4578899986 4555444 45567888887643
No 288
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.74 E-value=0.0038 Score=50.35 Aligned_cols=104 Identities=12% Similarity=0.086 Sum_probs=64.9
Q ss_pred EEEEeC-CCCeEEEeeccCC--------CccEEEEeCCCcccccceeeeee-ecCCceEEEEecCCCEEEEEcC-CCcEE
Q psy7433 12 DFVFLG-SCSLVATAGHSSE--------SKNVCLWDSLLPQKKALVQAFVC-HDQGASSLVFAPQHQLLISAGK-KGDIC 80 (213)
Q Consensus 12 ~~~~~~-~~~~l~~~g~~s~--------~~~i~iwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~-d~~v~ 80 (213)
..++.| ++++++.+|.... ...+.+||..+. +...+..... +.....++++..++++++.|+. +..+.
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~-~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~ 268 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTG-IVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTS 268 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTC-CBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCC-cEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceE
Confidence 556777 8889998874111 016889998543 2333333322 2233446778889999999884 45799
Q ss_pred EEeccCceEEEecccCCC-CeeEEEecCCCCEEEEec
Q psy7433 81 VIDLRQRVIRSRFNAHES-PVKCLAIDPHEEFFVTGA 116 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~ 116 (213)
+||..+.+....-..... .-.+++..++++.++.|+
T Consensus 269 ~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG 305 (656)
T 1k3i_A 269 LYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGG 305 (656)
T ss_dssp EEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECC
T ss_pred EecCcCCceeECCCCCccccccceEEecCCeEEEEeC
Confidence 999988754432221112 223456667899999988
No 289
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.67 E-value=0.0081 Score=44.06 Aligned_cols=174 Identities=10% Similarity=0.034 Sum_probs=95.2
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceee-eeeecCCceEEEEecCCCEEEEEcCCCcEEEEecc
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQA-FVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLR 85 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~ 85 (213)
...+.++.|.+++..++++ ..+.|. ...+...+.+.+.. .......+..+.|.+ +..++ ++..+.|.. ..+
T Consensus 35 ~~~~~~v~~~~~~~~~~~G----~~g~i~-~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~-~g~~g~i~~-S~D 106 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLVG----VNATLM-ETRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWI-VGEPPIMLH-TTD 106 (327)
T ss_dssp SSCEEEEEESSSSCEEEEE----TTTEEE-EESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEE-EEETTEEEE-ESS
T ss_pred CCcEEEEEECCCCcEEEEc----CCCeEE-EeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEE-EECCCeEEE-ECC
Confidence 4578999998888888865 466542 33221222233221 111234578888876 44444 455564433 222
Q ss_pred CceEEEecc---cCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCCc
Q psy7433 86 QRVIRSRFN---AHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGD 145 (213)
Q Consensus 86 ~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg~ 145 (213)
.++.-.... .....+..+.+.+++..++++. ++.+. ..+..+.+.|++++++++...+.
T Consensus 107 gG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~ 185 (327)
T 2xbg_A 107 GGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITN-VGAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSF 185 (327)
T ss_dssp TTSSCEECCCCTTCSSCEEEEEEEETTEEEEEET-TCCEEEESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSE
T ss_pred CCCCceECccccCCCCCeEEEEEECCCCEEEEeC-CccEEEEcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcE
Confidence 232222221 1234567777776666665553 44442 35778899998887776654433
Q ss_pred EEEEEc--cCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEe
Q psy7433 146 IKVWSL--SGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQ 201 (213)
Q Consensus 146 i~v~d~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~ 201 (213)
.+-.|- .+-+.+. ... ...+..+.+.+++.+..++.+|.+++.+
T Consensus 186 ~~S~d~gG~tW~~~~---~~~---------~~~~~~~~~~~~g~~~~~~~~G~~~~s~ 231 (327)
T 2xbg_A 186 YSTWEPGQTAWEPHN---RTT---------SRRLHNMGFTPDGRLWMIVNGGKIAFSD 231 (327)
T ss_dssp EEEECTTCSSCEEEE---CCS---------SSCEEEEEECTTSCEEEEETTTEEEEEE
T ss_pred EEEeCCCCCceeECC---CCC---------CCccceeEECCCCCEEEEeCCceEEEec
Confidence 333332 1222221 111 1467888888877777777778777663
No 290
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.62 E-value=0.02 Score=47.28 Aligned_cols=161 Identities=16% Similarity=0.127 Sum_probs=91.3
Q ss_pred CCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEE-EEcCCCcEEEEeccCc----eEEEecccCCCCeeEEE
Q psy7433 30 ESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLI-SAGKKGDICVIDLRQR----VIRSRFNAHESPVKCLA 104 (213)
Q Consensus 30 ~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~iwd~~~~----~~~~~~~~~~~~i~~~~ 104 (213)
....|+..++. .... ..+......+..++|++....|+ +-...+.|+.+++... .....+.........|+
T Consensus 402 n~~~Ir~i~l~---~~~~-~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLA 477 (791)
T 3m0c_C 402 NRHEVRKMTLD---RSEY-TSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLA 477 (791)
T ss_dssp CBSSEEEECTT---SCCC-EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEE
T ss_pred cccceeEeecc---CCcc-eeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceee
Confidence 45678888873 2222 22223345678999998555554 4445678888888652 22223332344567888
Q ss_pred ecCCCCEE-EEecCCCcee-----------------eceEEEEEccCCceEEEec-C-CCcEEEEEccCCeeeeeecCCC
Q psy7433 105 IDPHEEFF-VTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGA-G-DGDIKVWSLSGNHLLYNFPGEH 164 (213)
Q Consensus 105 ~~~~~~~l-~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~-~-dg~i~v~d~~~~~~~~~~~~~~ 164 (213)
+.+.+..| ++-...+.|. ..+..|+++|.+.+|+... . .+.|.+.++........+...-
T Consensus 478 vD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l 557 (791)
T 3m0c_C 478 VDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENI 557 (791)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSC
T ss_pred eeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCC
Confidence 88766443 3333444443 4578899999766555554 2 3678888875433322222111
Q ss_pred CceeEEEecCCCeEEEEeCC-CCeEEEE-ecCCcEEEEeCCC
Q psy7433 165 ARSSFFKHIGQGVTQLHVDG-GSRLFSC-GADGSMKVRQLPD 204 (213)
Q Consensus 165 ~~~~~~~~~~~~v~~~~~~~-~~~l~s~-~~d~~i~iw~~~~ 204 (213)
.....|++++ +++|+.+ ...+.|...++..
T Consensus 558 ----------~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG 589 (791)
T 3m0c_C 558 ----------QWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 589 (791)
T ss_dssp ----------SCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred ----------CCceEEEEecCCCeEEEEeCCCCcEEEEecCC
Confidence 4577888885 4555444 3455777777754
No 291
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.55 E-value=0.0069 Score=49.06 Aligned_cols=174 Identities=13% Similarity=0.146 Sum_probs=97.8
Q ss_pred CCCccEEEEeCCCcccccceeeeeeecCC----------c-eEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCC
Q psy7433 29 SESKNVCLWDSLLPQKKALVQAFVCHDQG----------A-SSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHE 97 (213)
Q Consensus 29 s~~~~i~iwd~~~~~~~~~~~~~~~~~~~----------v-~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~ 97 (213)
+.++.|..+|. .+++.+..+...... + ..+.. .+..++.++.|+.|..+|.++++.+-.+....
T Consensus 73 ~~~~~v~AlD~---~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~ 147 (668)
T 1kv9_A 73 MSWSRVIAVDA---ASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQQTTD 147 (668)
T ss_dssp EGGGEEEEEET---TTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEEECSC
T ss_pred CCCCeEEEEEC---CCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeeeccCC
Confidence 36788999998 456665554322110 0 11222 34578888889999999999998876664321
Q ss_pred C-CeeEEEecC--CCCEEEEecC------CCcee-------------ec-------------------------------
Q psy7433 98 S-PVKCLAIDP--HEEFFVTGAG------DGDIK-------------SP------------------------------- 124 (213)
Q Consensus 98 ~-~i~~~~~~~--~~~~l~~~~~------~~~i~-------------~~------------------------------- 124 (213)
. ....+...| .+..++++.. ++.+. ..
T Consensus 148 ~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~ 227 (668)
T 1kv9_A 148 PAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGG 227 (668)
T ss_dssp TTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCE
T ss_pred CCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCC
Confidence 0 000111111 1223333322 13232 00
Q ss_pred ----eEEEEEccCCceEEEecCCC-------------------cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEE
Q psy7433 125 ----VKCLAIDPHEEFFVTGAGDG-------------------DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLH 181 (213)
Q Consensus 125 ----v~~~~~~~~~~~l~~~~~dg-------------------~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 181 (213)
...++++|+..+++.++.++ .|..+|.++++.+-.++......-.+. ...+.....
T Consensus 228 gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~-~~~~~~~~d 306 (668)
T 1kv9_A 228 GGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFT-ATQQITLAE 306 (668)
T ss_dssp ECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCC-CCSCEEEEE
T ss_pred CCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCcccccc-CCCCcEEEE
Confidence 01367888778888887765 389999999998877765311000000 001222222
Q ss_pred eCCCC----eEEEEecCCcEEEEeCCCCccc
Q psy7433 182 VDGGS----RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 182 ~~~~~----~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
...++ .++.++.+|.++++|..+++.+
T Consensus 307 ~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 307 LNIDGKPRKVLMQAPKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp EEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred eccCCcEEEEEEEECCCCEEEEEECCCCCEe
Confidence 22233 4888899999999999988654
No 292
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.50 E-value=0.026 Score=45.38 Aligned_cols=184 Identities=12% Similarity=0.035 Sum_probs=107.4
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeee------ecCCceEEEEecCCCEEE-EEcCCCcEE
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVC------HDQGASSLVFAPQHQLLI-SAGKKGDIC 80 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~-~~~~d~~v~ 80 (213)
+.+.+++|.+.+..|..+- ...+.|+.++.+. ......+.. ....+..+++...++.|+ +-+..+.|.
T Consensus 340 ~~~~~ld~d~~~~~iy~sD--~~~~~I~r~~~~g---~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~ 414 (628)
T 4a0p_A 340 RNVRAIDYDPLDKQLYWID--SRQNMIRKAQEDG---SQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVIN 414 (628)
T ss_dssp SCEEEEEEETTTTEEEEEE--TTTTEEEEEETTS---CSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCceEEEEecCCCeEEEEe--cCcceEEEEEcCC---CCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEE
Confidence 4578899998666555552 4567888888631 111111211 233578999998766554 555678899
Q ss_pred EEeccCceEEEecccCCCCeeEEEecC-CCCEEEEec-----------CCCcee--------eceEEEEEccCCceEEEe
Q psy7433 81 VIDLRQRVIRSRFNAHESPVKCLAIDP-HEEFFVTGA-----------GDGDIK--------SPVKCLAIDPHEEFFVTG 140 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~-----------~~~~i~--------~~v~~~~~~~~~~~l~~~ 140 (213)
+.+++.......+.........+++.| .+..+.+-. .||..+ ..++.++++++++.|..+
T Consensus 415 v~~~~G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~~~~l~~P~gla~D~~~~~LYw~ 494 (628)
T 4a0p_A 415 VTRLDGRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLFWA 494 (628)
T ss_dssp EEETTSCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred EEECCCCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEEEeccCCCccEEEEeCCCCEEEEE
Confidence 998864322222233445688999999 454444422 222211 467889999987666655
Q ss_pred c-CCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCc
Q psy7433 141 A-GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 141 ~-~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 206 (213)
. ..+.|..+|+... ....+.... .....+++...+..+.+-.....|...|..+++
T Consensus 495 D~~~~~I~~~~~dG~-~r~~~~~~~---------~~~P~glav~~~~ly~tD~~~~~i~~~~k~~G~ 551 (628)
T 4a0p_A 495 DSDLRRIESSDLSGA-NRIVLEDSN---------ILQPVGLTVFENWLYWIDKQQQMIEKIDMTGRE 551 (628)
T ss_dssp ETTTTEEEEEETTSC-SCEEEECSS---------CSCEEEEEEETTEEEEEETTTTEEEEEETTSSS
T ss_pred eCCCCEEEEEeCCCC-ceEEEEcCC---------CCCcEEEEEECCEEEEEECCCCeEEEEECcCCC
Confidence 4 4578988988432 222232111 134566776654444555555677777766543
No 293
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.43 E-value=0.02 Score=42.50 Aligned_cols=102 Identities=10% Similarity=0.158 Sum_probs=62.7
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee---eecCCceEEEEecC---CCEEEEEcC-C----
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV---CHDQGASSLVFAPQ---HQLLISAGK-K---- 76 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~---~~~~~v~~~~~~~~---~~~l~~~~~-d---- 76 (213)
.....++|.|+|+++++- .++.|.+++ . .+...+..+. ........++|+|+ +..|+.+.. .
T Consensus 31 ~~P~~ia~~pdG~l~V~e----~~g~I~~i~-~--g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~ 103 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIAE----RPGRIRLFR-E--GRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGL 103 (352)
T ss_dssp SCEEEEEECTTSCEEEEE----TTTEEEEEE-T--TEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSS
T ss_pred CCceEEEEcCCCeEEEEe----CCCeEEEEE-C--CCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCC
Confidence 457799999999987776 569999998 2 2222222221 12346789999998 555554433 2
Q ss_pred -CcEEEEeccCc-----eE-EEecc---cCCCCeeEEEecCCCCEEEEec
Q psy7433 77 -GDICVIDLRQR-----VI-RSRFN---AHESPVKCLAIDPHEEFFVTGA 116 (213)
Q Consensus 77 -~~v~iwd~~~~-----~~-~~~~~---~~~~~i~~~~~~~~~~~l~~~~ 116 (213)
..|..++...+ +. +..+. ........++|.|++..+++.+
T Consensus 104 ~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 104 RNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred ccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 56777877643 11 12233 1112346899999997666643
No 294
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.40 E-value=0.035 Score=44.57 Aligned_cols=141 Identities=13% Similarity=0.045 Sum_probs=84.3
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCC-EEEEEcCCCcEEEEeccC
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQ-LLISAGKKGDICVIDLRQ 86 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~ 86 (213)
..+.+++|.+.+..|..+. ...+.|..++.+. ......+.........+++.+.+. +.++-...+.|.+.++..
T Consensus 349 ~~~~~ld~d~~~~~ly~sD--~~~~~I~r~~~~g---~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G 423 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTD--DEVRAIRRSFIDG---SGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNG 423 (619)
T ss_dssp SSEEEEEEETTTTEEEEEE--TTTTEEEEEETTS---CSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CccEEEEEEcCCCeEEEEe--CCCCeEEEEEcCC---CccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCC
Confidence 3467889998554444442 4678888888732 112222222234577899987444 444545678899998875
Q ss_pred ceEEEecccCCCCeeEEEecCC-CCEEEEecC-CCcee-----------------eceEEEEEccCCceEEEe-cCCCcE
Q psy7433 87 RVIRSRFNAHESPVKCLAIDPH-EEFFVTGAG-DGDIK-----------------SPVKCLAIDPHEEFFVTG-AGDGDI 146 (213)
Q Consensus 87 ~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~-~~~i~-----------------~~v~~~~~~~~~~~l~~~-~~dg~i 146 (213)
......+...-.....+++.|. +..+++-.. ...|. ..+..++++++++.|..+ +..+.|
T Consensus 424 ~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I 503 (619)
T 3s94_A 424 TMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKI 503 (619)
T ss_dssp CSCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEE
Confidence 5332222333456789999986 444443211 12222 467889999866655555 455778
Q ss_pred EEEEccC
Q psy7433 147 KVWSLSG 153 (213)
Q Consensus 147 ~v~d~~~ 153 (213)
..+++..
T Consensus 504 ~~~~~dG 510 (619)
T 3s94_A 504 EVMNTDG 510 (619)
T ss_dssp EEEESSS
T ss_pred EEEecCC
Confidence 8888753
No 295
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.38 E-value=0.0017 Score=52.88 Aligned_cols=145 Identities=12% Similarity=-0.037 Sum_probs=82.5
Q ss_pred eEEEEEeCC-CCeEEEeeccCCCccEEEEeCCCcccccceeee-eeecCCceEEEEecCCCEEEEEcC--CCcEEEEecc
Q psy7433 10 TSDFVFLGS-CSLVATAGHSSESKNVCLWDSLLPQKKALVQAF-VCHDQGASSLVFAPQHQLLISAGK--KGDICVIDLR 85 (213)
Q Consensus 10 v~~~~~~~~-~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~--d~~v~iwd~~ 85 (213)
...|++.+. ++++++- ...+.|.+.++. +.....+ .........++++|.+.+|+.... .+.|..+++.
T Consensus 455 P~glavD~~~g~LY~tD---~~~~~I~v~d~d----g~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~d 527 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTD---SVLGTVSVADTK----GVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 527 (699)
T ss_dssp CCCEECCCSSSBCEECC---TTTSCEEEEBSS----SCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSS
T ss_pred cceEEEEeeCCcEEEEe---ccCCeEEEEecC----CCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCC
Confidence 456777754 4444443 457889999873 2222222 222244678899997666665543 2677777765
Q ss_pred CceEEEecccCCCCeeEEEecCCCCEEEEe-cCCCcee-------------------eceEEEEEccCCceEEEecCCCc
Q psy7433 86 QRVIRSRFNAHESPVKCLAIDPHEEFFVTG-AGDGDIK-------------------SPVKCLAIDPHEEFFVTGAGDGD 145 (213)
Q Consensus 86 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~~~~i~-------------------~~v~~~~~~~~~~~l~~~~~dg~ 145 (213)
.......+.........|+++|++..|..+ ...+.|. .....|++..+ .++++....+.
T Consensus 528 G~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~ 606 (699)
T 1n7d_A 528 GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEA 606 (699)
T ss_dssp SCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTC
T ss_pred CCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCe
Confidence 432222222223456789999875544443 3344443 12234455433 45555566788
Q ss_pred EEEEEccCCeeeeeecC
Q psy7433 146 IKVWSLSGNHLLYNFPG 162 (213)
Q Consensus 146 i~v~d~~~~~~~~~~~~ 162 (213)
|..+|..+++.+..+..
T Consensus 607 V~~~d~~~G~~~~~i~~ 623 (699)
T 1n7d_A 607 IFSANRLTGSDVNLLAE 623 (699)
T ss_dssp EEEEETTTEEEEECCCT
T ss_pred EEEEEccCCCceEEeec
Confidence 99999877777766643
No 296
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.37 E-value=0.0086 Score=47.56 Aligned_cols=32 Identities=19% Similarity=0.181 Sum_probs=26.4
Q ss_pred CCceEEEecCCCcEEEEEccCCeeeeeecCCC
Q psy7433 133 HEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEH 164 (213)
Q Consensus 133 ~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~ 164 (213)
.+..++.++.||.++.+|.++++.+.++....
T Consensus 474 ~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~ 505 (571)
T 2ad6_A 474 KGGLVWYATLDGYLKALDNKDGKELWNFKMPS 505 (571)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred CCCEEEEEcCCCeEEEEECCCCCEEEEEeCCC
Confidence 35567778999999999999999998887643
No 297
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.37 E-value=0.0064 Score=41.82 Aligned_cols=103 Identities=11% Similarity=0.016 Sum_probs=61.0
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccc---cceeeee--eecCCceEEEEecCCCEEEEEcCCCcEEEEe
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKK---ALVQAFV--CHDQGASSLVFAPQHQLLISAGKKGDICVID 83 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~---~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd 83 (213)
.+.+++|+|+|.+.+.. +|.+.-.+..+.... .....+- +-. ...++.|.|+|.+.++ .||.|.-++
T Consensus 42 ~~~~laf~P~G~LYaV~-----~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~ 113 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGVL-----NDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNGYLYAV--SKDKLYKAS 113 (236)
T ss_dssp TCSEEEECTTSCEEEEE-----TTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTSCEEEE--ETTEEEEES
T ss_pred cceeEEECCCccEEEEe-----CCeEEEECCCCCCcccccccccEecccccc-cceEEEECCCCCEEEe--CCCEEEEeC
Confidence 57799999999977774 565554443211000 1111110 111 2588999999987777 568888777
Q ss_pred ccCceE-------EEecccCCCCeeEEEecCCCCEEEEecCCCce
Q psy7433 84 LRQRVI-------RSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121 (213)
Q Consensus 84 ~~~~~~-------~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i 121 (213)
-.+... ...-...=..+..+.+.|+|.+.++. ++.+
T Consensus 114 pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~l 156 (236)
T 1tl2_A 114 PPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQF 156 (236)
T ss_dssp CCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred CCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcE
Confidence 533110 00001111357899999999988877 6655
No 298
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.29 E-value=0.028 Score=41.12 Aligned_cols=145 Identities=11% Similarity=-0.042 Sum_probs=85.0
Q ss_pred ceEEEEEeCCCC-eEEEeeccCCCccEEEEeCCCcccccceeee-eeecCCceEEEEecCCCEEEEEcC--CCcEEEEec
Q psy7433 9 ITSDFVFLGSCS-LVATAGHSSESKNVCLWDSLLPQKKALVQAF-VCHDQGASSLVFAPQHQLLISAGK--KGDICVIDL 84 (213)
Q Consensus 9 ~v~~~~~~~~~~-~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~--d~~v~iwd~ 84 (213)
....+++.+.+. ++++- ...+.|.+++++ +.....+ .........+++.|.+..|+.... .+.|...++
T Consensus 80 ~p~glavd~~~g~ly~~d---~~~~~I~~~~~d----G~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~ 152 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTD---SETNRIEVSNLD----GSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGM 152 (318)
T ss_dssp CCCEEEEETTTTEEEEEE---TTTTEEEEEETT----SCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEET
T ss_pred CccEEEEEcCCCeEEEEE---CCCCEEEEEECC----CCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEc
Confidence 455688887444 44444 467789999873 2222222 223345689999997666666552 567888887
Q ss_pred cCceEEEecccCCCCeeEEEecCCCCEEEEec-CCCcee-----------------eceEEEEEccCCceEEEecCCCcE
Q psy7433 85 RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGA-GDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGDI 146 (213)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg~i 146 (213)
............-.....++++|++..|..+. ..+.|. ..+..+++.. +.++.+-...+.|
T Consensus 153 dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V 231 (318)
T 3sov_A 153 DGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSI 231 (318)
T ss_dssp TSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEE
T ss_pred CCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeE
Confidence 64332222222334568999998666555443 333332 3445566653 3455555567788
Q ss_pred EEEEccCCeeeeeec
Q psy7433 147 KVWSLSGNHLLYNFP 161 (213)
Q Consensus 147 ~v~d~~~~~~~~~~~ 161 (213)
..+|..+++....+.
T Consensus 232 ~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 232 LACNKYTGEGLREIH 246 (318)
T ss_dssp EEEETTTCCSCEEEE
T ss_pred EEEECCCCCceEEEe
Confidence 888886666544443
No 299
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.25 E-value=0.01 Score=40.83 Aligned_cols=86 Identities=13% Similarity=0.137 Sum_probs=57.0
Q ss_pred CCceEEEEecCCCEEEEEcCCCcEEEEeccCceE------EEecc-cCCCCeeEEEecCCCCEEEEecCCCcee------
Q psy7433 56 QGASSLVFAPQHQLLISAGKKGDICVIDLRQRVI------RSRFN-AHESPVKCLAIDPHEEFFVTGAGDGDIK------ 122 (213)
Q Consensus 56 ~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~------~~~~~-~~~~~i~~~~~~~~~~~l~~~~~~~~i~------ 122 (213)
..+..++|+|++.+.++ .+|.+.-.+..+... -..+- ..-....++.|.|++.+.++ .|+.+.
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 46889999998875555 677776666544211 01110 00111478999999988777 457774
Q ss_pred ------------------eceEEEEEccCCceEEEecCCCcEE
Q psy7433 123 ------------------SPVKCLAIDPHEEFFVTGAGDGDIK 147 (213)
Q Consensus 123 ------------------~~v~~~~~~~~~~~l~~~~~dg~i~ 147 (213)
..+..+.+.|+|.+.++. |+.++
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFY 157 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence 467899999999877766 67643
No 300
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.24 E-value=0.034 Score=41.13 Aligned_cols=128 Identities=13% Similarity=0.239 Sum_probs=83.0
Q ss_pred CccEEEEeCCCcccccceeeeee------ec-CCceEEEE--ecC-CC-EEEEEcCCCcEEEEecc-------CceEEEe
Q psy7433 31 SKNVCLWDSLLPQKKALVQAFVC------HD-QGASSLVF--APQ-HQ-LLISAGKKGDICVIDLR-------QRVIRSR 92 (213)
Q Consensus 31 ~~~i~iwd~~~~~~~~~~~~~~~------~~-~~v~~~~~--~~~-~~-~l~~~~~d~~v~iwd~~-------~~~~~~~ 92 (213)
+++|.+|++.. ....+..+.. .. ..+..+++ +|. +. +++....+|.+..|++. +.+.++.
T Consensus 98 ~n~l~vf~iDp--~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~ 175 (355)
T 3amr_A 98 KNTIEIYAIDG--KNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRA 175 (355)
T ss_dssp CCEEEEEEECT--TTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEE
T ss_pred CCeEEEEEECC--CCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEE
Confidence 68899997631 1112333311 11 45667777 664 43 68888889999999983 3466677
Q ss_pred cccCCCCeeEEEecCCCCEEEEecCCCcee------------------------eceEEEEE--ccCCc-eEEEec-CCC
Q psy7433 93 FNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------------SPVKCLAI--DPHEE-FFVTGA-GDG 144 (213)
Q Consensus 93 ~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------------~~v~~~~~--~~~~~-~l~~~~-~dg 144 (213)
+.. .+.+..+...+....|.++-++.-|. ..+..|++ .++++ +|++++ .++
T Consensus 176 f~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~ 254 (355)
T 3amr_A 176 FKM-NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNS 254 (355)
T ss_dssp EEC-SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGT
T ss_pred ecC-CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCC
Confidence 663 45677788887777777776654442 46777777 45555 666666 567
Q ss_pred cEEEEEcc-CCeeeeeec
Q psy7433 145 DIKVWSLS-GNHLLYNFP 161 (213)
Q Consensus 145 ~i~v~d~~-~~~~~~~~~ 161 (213)
...+||.+ +.+.+..+.
T Consensus 255 s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 255 SYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEEEEESSTTCCEEEEEE
T ss_pred EEEEEECCCCCcEEEEEE
Confidence 99999996 555565553
No 301
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.21 E-value=0.025 Score=43.98 Aligned_cols=158 Identities=12% Similarity=0.120 Sum_probs=86.4
Q ss_pred ceEEEEEeCC--CCeEEEeeccCCCccEEEEeCCCcccccceeeeeee----cCCceEEEE-------ecCCCEEEEEcC
Q psy7433 9 ITSDFVFLGS--CSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCH----DQGASSLVF-------APQHQLLISAGK 75 (213)
Q Consensus 9 ~v~~~~~~~~--~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~----~~~v~~~~~-------~~~~~~l~~~~~ 75 (213)
....|+|.|. ++++++- ...+.|++.|.+ .. .+..+... ......++| +++++.|+.+..
T Consensus 140 ~p~~la~dp~~~~~Lyv~~---~~~~~i~~ID~~---~~-~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~ 212 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICY---DGHKAIQLIDLK---NR-MLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAID 212 (496)
T ss_dssp SEEEEEEETTEEEEEEEEE---ETEEEEEEEETT---TT-EEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEEC
T ss_pred CCCEEEEccCCCCEEEEEE---CCCCeEEEEECC---CC-EEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeC
Confidence 4678999983 4455554 345678888873 32 23332211 224789999 999987776655
Q ss_pred CC-c------EEEEeccC-ceEEEecccCCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccC-CceEEEecCCCcE
Q psy7433 76 KG-D------ICVIDLRQ-RVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPH-EEFFVTGAGDGDI 146 (213)
Q Consensus 76 d~-~------v~iwd~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~-~~~l~~~~~dg~i 146 (213)
.+ . |.+++... +.. .. .++...+.. ......++++|+ +.++++-..++.|
T Consensus 213 ~~~~~~~~~~V~~i~r~~~G~~----~~----------~~~~~~v~~-------~~~p~giavdp~~g~LYvtd~~~g~V 271 (496)
T 3kya_A 213 YDGKGDESPSVYIIKRNADGTF----DD----------RSDIQLIAA-------YKQCNGATIHPINGELYFNSYEKGQV 271 (496)
T ss_dssp CCTTGGGEEEEEEEECCTTSCC----ST----------TSCEEEEEE-------ESCCCCEEECTTTCCEEEEETTTTEE
T ss_pred CCCCcccCceEEEEecCCCCce----ee----------cccceeecc-------CCCceEEEEcCCCCeEEEEECCCCEE
Confidence 43 2 44444222 110 00 000011110 123456777884 4455566677889
Q ss_pred EEEEcc-------CCee-----------eee-ecCCCCceeEEEecCCCeEEEEeCCCCe-E-EEEecCCcEEEEeCC
Q psy7433 147 KVWSLS-------GNHL-----------LYN-FPGEHARSSFFKHIGQGVTQLHVDGGSR-L-FSCGADGSMKVRQLP 203 (213)
Q Consensus 147 ~v~d~~-------~~~~-----------~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l-~s~~~d~~i~iw~~~ 203 (213)
..+|+. ++.. ... +.... ......++++|++. | ++-.....|+.++..
T Consensus 272 ~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~---------~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 272 FRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIAD---------PSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp EEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSS---------SSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EEEecccccccccCceeecccccccccccceeEecCC---------CCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 999987 4443 011 11111 14568899999764 4 444456788886654
No 302
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.17 E-value=0.039 Score=40.93 Aligned_cols=66 Identities=11% Similarity=0.115 Sum_probs=35.6
Q ss_pred cCceEEEEEeCC---CCeEEEeeccCCC-----ccEEEEeCCCcc--ccc-ceeeee---eecCCceEEEEecCCCEEEE
Q psy7433 7 NKITSDFVFLGS---CSLVATAGHSSES-----KNVCLWDSLLPQ--KKA-LVQAFV---CHDQGASSLVFAPQHQLLIS 72 (213)
Q Consensus 7 ~~~v~~~~~~~~---~~~l~~~g~~s~~-----~~i~iwd~~~~~--~~~-~~~~~~---~~~~~v~~~~~~~~~~~l~~ 72 (213)
......|+|+|+ +..|..+- +.. ..|..++..... ..+ .+..+. ........++|.|+|.+.++
T Consensus 74 ~~~p~gia~~pdf~~~g~lYv~~--~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~ 151 (352)
T 2ism_A 74 ESGLLGLALHPRFPQEPYVYAYR--TVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVT 151 (352)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEE--EECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEE
T ss_pred CCCceeEEECCCCCCCCEEEEEE--ecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEE
Confidence 346789999998 44444331 222 677778764210 111 112122 11123468999999976666
Q ss_pred Ec
Q psy7433 73 AG 74 (213)
Q Consensus 73 ~~ 74 (213)
.+
T Consensus 152 ~G 153 (352)
T 2ism_A 152 TG 153 (352)
T ss_dssp CC
T ss_pred EC
Confidence 43
No 303
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.08 E-value=0.068 Score=41.58 Aligned_cols=195 Identities=11% Similarity=0.091 Sum_probs=103.3
Q ss_pred CceEEEEE-------eCCCCeEEEeeccCCC------ccEEEEeCCCccccc--c-eeeeeeecCCceEEEEecC-CCEE
Q psy7433 8 KITSDFVF-------LGSCSLVATAGHSSES------KNVCLWDSLLPQKKA--L-VQAFVCHDQGASSLVFAPQ-HQLL 70 (213)
Q Consensus 8 ~~v~~~~~-------~~~~~~l~~~g~~s~~------~~i~iwd~~~~~~~~--~-~~~~~~~~~~v~~~~~~~~-~~~l 70 (213)
.....++| +++++.|+.+. ..+ ..|.+.+........ . ...+.. -.....++++|+ +.++
T Consensus 186 ~~p~~ia~~~~~~~~d~~G~~lyvad--~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LY 262 (496)
T 3kya_A 186 NRIRSIAFNKKIEGYADEAEYMIVAI--DYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELY 262 (496)
T ss_dssp SBEEEEEECCCBTTTBCTTCEEEEEE--CCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEE
T ss_pred CCCcEEEEeecccccCCCCCEEEEEe--CCCCCcccCceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEE
Confidence 35889999 99998555552 232 136666532100111 0 022222 234567889994 5555
Q ss_pred EEEcCCCcEEEEecc-------CceE-----------EEe-cc-cCCCCeeEEEecCCCCEEEEe-cCCCceee------
Q psy7433 71 ISAGKKGDICVIDLR-------QRVI-----------RSR-FN-AHESPVKCLAIDPHEEFFVTG-AGDGDIKS------ 123 (213)
Q Consensus 71 ~~~~~d~~v~iwd~~-------~~~~-----------~~~-~~-~~~~~i~~~~~~~~~~~l~~~-~~~~~i~~------ 123 (213)
++-..++.|..+|+. ++.. ... +. ........++++|+++.|..+ ...+.|+.
T Consensus 263 vtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~ 342 (496)
T 3kya_A 263 FNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEI 342 (496)
T ss_dssp EEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETT
T ss_pred EEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCC
Confidence 566677889999997 4443 111 11 123446789999999854444 33444430
Q ss_pred ------------------------------ceE-EEEEc-------cCCceEEEecCCCcEEEEEccCCeeeeeecCCCC
Q psy7433 124 ------------------------------PVK-CLAID-------PHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHA 165 (213)
Q Consensus 124 ------------------------------~v~-~~~~~-------~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~ 165 (213)
.+. .+... +++.++++=..+++|+.++ .++. +.++-+...
T Consensus 343 ~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~ 420 (496)
T 3kya_A 343 KKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGRGA 420 (496)
T ss_dssp TTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEESCT
T ss_pred cceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecccc
Confidence 112 22332 3344444445566677766 3342 333322110
Q ss_pred c-------------e-eEEEecCCCeEEEEeCCC-CeEEEEe-cCCcEEEEeCCCCcc
Q psy7433 166 R-------------S-SFFKHIGQGVTQLHVDGG-SRLFSCG-ADGSMKVRQLPDRDA 207 (213)
Q Consensus 166 ~-------------~-~~~~~~~~~v~~~~~~~~-~~l~s~~-~d~~i~iw~~~~~~~ 207 (213)
. . ......-.....|+++++ +.|+.+. ....|+.+++.....
T Consensus 421 ~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~~ 478 (496)
T 3kya_A 421 STSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEEN 478 (496)
T ss_dssp THHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC-
T ss_pred cccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCcc
Confidence 0 0 000001135788999985 6665554 566899999876644
No 304
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.07 E-value=0.053 Score=40.29 Aligned_cols=170 Identities=13% Similarity=0.122 Sum_probs=97.2
Q ss_pred ceEEEEEeCCCCeEEEeec-----c----CCCccEEEEeCCCccc-ccceeeeee-----ecCCceEEEEec--CCC-EE
Q psy7433 9 ITSDFVFLGSCSLVATAGH-----S----SESKNVCLWDSLLPQK-KALVQAFVC-----HDQGASSLVFAP--QHQ-LL 70 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~-----~----s~~~~i~iwd~~~~~~-~~~~~~~~~-----~~~~v~~~~~~~--~~~-~l 70 (213)
..-++...|+|..++++|. . ..+|.|.++|.+.... .+.+ .+.+ ..-....+.+.+ ++. +|
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l-~~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSEL-EIIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEEC-EEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEE-EccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 4556778888877766521 0 1588999999852211 1122 1221 123556777765 343 45
Q ss_pred EEEcC---CCcEEEEeccCc----eEEEecccC-CCCeeEEEecCCCCEEEEecC-----------------CCcee---
Q psy7433 71 ISAGK---KGDICVIDLRQR----VIRSRFNAH-ESPVKCLAIDPHEEFFVTGAG-----------------DGDIK--- 122 (213)
Q Consensus 71 ~~~~~---d~~v~iwd~~~~----~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~-----------------~~~i~--- 122 (213)
+.+.. +..+-+|+++.. ..+..+.+. -...+.+.+.++|.++++... .+.+.
T Consensus 130 ~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d 209 (355)
T 3sre_A 130 LVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYS 209 (355)
T ss_dssp EEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEEC
T ss_pred EEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEE
Confidence 55422 457778777543 223334332 235678999998886666431 12221
Q ss_pred -----------eceEEEEEccCCceEEEe-cCCCcEEEEEccC-Cee--eeeecCCCCceeEEEecCCCeEEEEeCC-CC
Q psy7433 123 -----------SPVKCLAIDPHEEFFVTG-AGDGDIKVWSLSG-NHL--LYNFPGEHARSSFFKHIGQGVTQLHVDG-GS 186 (213)
Q Consensus 123 -----------~~v~~~~~~~~~~~l~~~-~~dg~i~v~d~~~-~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~ 186 (213)
...+.++|+||++.|..+ +..+.|..|++.. +.. ...+.. ......+++++ ++
T Consensus 210 ~~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~-----------~g~PDGi~vD~e~G 278 (355)
T 3sre_A 210 PNDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSF-----------DTLVDNISVDPVTG 278 (355)
T ss_dssp TTCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEC-----------SSEEEEEEECTTTC
T ss_pred CCeEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeC-----------CCCCceEEEeCCCC
Confidence 457889999999866555 5678999999863 221 112211 24577788887 46
Q ss_pred eEEE
Q psy7433 187 RLFS 190 (213)
Q Consensus 187 ~l~s 190 (213)
.|.+
T Consensus 279 ~lwv 282 (355)
T 3sre_A 279 DLWV 282 (355)
T ss_dssp CEEE
T ss_pred cEEE
Confidence 5544
No 305
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.06 E-value=0.011 Score=47.01 Aligned_cols=31 Identities=26% Similarity=0.502 Sum_probs=26.5
Q ss_pred CceEEEecCCCcEEEEEccCCeeeeeecCCC
Q psy7433 134 EEFFVTGAGDGDIKVWSLSGNHLLYNFPGEH 164 (213)
Q Consensus 134 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~ 164 (213)
+.+++.++.||.++.||.++++.+.+++...
T Consensus 497 gglvf~g~~dg~l~A~D~~tG~~lW~~~~~~ 527 (582)
T 1flg_A 497 GNLVFTGTGDGYFKAFDAKSGKELWKFQTGS 527 (582)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred CCEEEEECCCCcEEEEECCCCCEEEEecCCC
Confidence 5677779999999999999999998887643
No 306
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.05 E-value=0.084 Score=42.20 Aligned_cols=80 Identities=13% Similarity=0.087 Sum_probs=47.5
Q ss_pred EEEccCCceEEEecCC----------------CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeC-CCC----
Q psy7433 128 LAIDPHEEFFVTGAGD----------------GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVD-GGS---- 186 (213)
Q Consensus 128 ~~~~~~~~~l~~~~~d----------------g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~---- 186 (213)
+++.++..+++.++.+ +.|..+|.++++.+-.++......-.+.....++. +... .++
T Consensus 246 ~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~ 324 (599)
T 1w6s_A 246 YAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARK 324 (599)
T ss_dssp CEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEE
T ss_pred eeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEE
Confidence 4566666667766655 37889999999988776653211000000012222 2221 233
Q ss_pred eEEEEecCCcEEEEeCCCCccc
Q psy7433 187 RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 187 ~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
.++.++.+|.++++|..+++.+
T Consensus 325 ~v~~~~~~G~l~~lD~~tG~~l 346 (599)
T 1w6s_A 325 LLTHPDRNGIVYTLDRTDGALV 346 (599)
T ss_dssp EEEEECTTSEEEEEETTTCCEE
T ss_pred EEEEECCCcEEEEEECCCCCEe
Confidence 3667888999999999888654
No 307
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.89 E-value=0.074 Score=39.02 Aligned_cols=173 Identities=8% Similarity=0.102 Sum_probs=106.1
Q ss_pred EEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCc-eEEE
Q psy7433 13 FVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR-VIRS 91 (213)
Q Consensus 13 ~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~-~~~~ 91 (213)
.-.+|..+.+|.- ....+.++|+ +....++.+.- ...|.-=+|-.+ +.|+... +..|+-|++... .+.+
T Consensus 72 AIMnP~~~ViALr----ag~~LQiFnl---etK~klks~~~-~e~VvfWkWis~-~~L~lVT-~taVyHWs~~~~s~P~k 141 (365)
T 2xzh_A 72 AIMNPASKVIALK----AGKTLQIFNI---EMKSKMKAHTM-TDDVTFWKWISL-NTVALVT-DNAVYHWSMEGESQPVK 141 (365)
T ss_dssp EEECSSSSEEEEE----ETTEEEEEET---TTTEEEEEEEC-SSCEEEEEECSS-SEEEEEE-SSEEEEEESSTTCCCEE
T ss_pred eeeCCCccEEEEe----cCCeEEEech---HHhhhhcceec-CCccEEEEecCC-CeEEEEc-CCcEEEEcccCCCCCce
Confidence 4467888888876 4788999999 56666666553 345665566544 3455443 358999998743 4444
Q ss_pred ecccC----CCCeeEEEecCCCCEEEEecC---CCcee------------------------------------------
Q psy7433 92 RFNAH----ESPVKCLAIDPHEEFFVTGAG---DGDIK------------------------------------------ 122 (213)
Q Consensus 92 ~~~~~----~~~i~~~~~~~~~~~l~~~~~---~~~i~------------------------------------------ 122 (213)
.+..| ..+|..-..+++.++++..+- ++.+.
T Consensus 142 vFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~ 221 (365)
T 2xzh_A 142 MFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAV 221 (365)
T ss_dssp EEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECCSEEEEEEECCTTCSSCEEEEEEEE
T ss_pred eeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccceeeeeeeeeEEEecCCCCCCceEEEEEE
Confidence 44332 345666777777776655442 33332
Q ss_pred --------------------------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCC
Q psy7433 123 --------------------------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEH 164 (213)
Q Consensus 123 --------------------------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~ 164 (213)
.-..+|..++.-..+..-+.-|.|++||+.++.+++.-+-..
T Consensus 222 r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~ 301 (365)
T 2xzh_A 222 RGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG 301 (365)
T ss_dssp EETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred ecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCC
Confidence 223344444444567777778899999999999988776654
Q ss_pred CceeEEEecCCCeEEEEeCC-CCeEEEEecCCcEEEEeCCCC
Q psy7433 165 ARSSFFKHIGQGVTQLHVDG-GSRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 165 ~~~~~~~~~~~~v~~~~~~~-~~~l~s~~~d~~i~iw~~~~~ 205 (213)
..|-..+-++ .+=++.....|.|.--.+++.
T Consensus 302 ----------d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~ 333 (365)
T 2xzh_A 302 ----------ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE 333 (365)
T ss_dssp ----------SCEEEEEEEGGGTEEEEEETTCEEEEEEECTT
T ss_pred ----------CceEEecccCCCCcEEEEcCCCEEEEEEECcc
Confidence 3444333332 233555556776666665554
No 308
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.75 E-value=0.097 Score=38.39 Aligned_cols=145 Identities=16% Similarity=0.198 Sum_probs=88.1
Q ss_pred cCCceEEEEecCCCEEEEEc-CCCcEEEEeccCceEEE-ecccC----C--CCeeEEEe---cCCCCEEEEecC------
Q psy7433 55 DQGASSLVFAPQHQLLISAG-KKGDICVIDLRQRVIRS-RFNAH----E--SPVKCLAI---DPHEEFFVTGAG------ 117 (213)
Q Consensus 55 ~~~v~~~~~~~~~~~l~~~~-~d~~v~iwd~~~~~~~~-~~~~~----~--~~i~~~~~---~~~~~~l~~~~~------ 117 (213)
...-.+++|++....|+.++ ..+.|..||...+.... .+... . ..+..+.+ .|+++++++...
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNF 91 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCT
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccc
Confidence 34456789988555555555 78999999997553322 33321 1 13578999 688777664331
Q ss_pred -------CCcee-----------------------e----------ceEEEEEccCCceEEEecCC-CcEEEEEccCCee
Q psy7433 118 -------DGDIK-----------------------S----------PVKCLAIDPHEEFFVTGAGD-GDIKVWSLSGNHL 156 (213)
Q Consensus 118 -------~~~i~-----------------------~----------~v~~~~~~~~~~~l~~~~~d-g~i~v~d~~~~~~ 156 (213)
+..+. . ....|+..++|+..++++.. +.|...+.... .
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~ 170 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-T 170 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-C
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-E
Confidence 11111 1 37789999999988888777 77666665422 2
Q ss_pred eeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCC
Q psy7433 157 LYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~ 204 (213)
...+...... .......+.++++|++ .|++...+|.+..+|+..
T Consensus 171 ~~~~~~~~~~----~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 171 VSTFAWESGN----GGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EEEEEECCCC----SSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred EeeeeecCCC----cccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 2222111100 0001347789999976 466655599999999874
No 309
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.66 E-value=0.12 Score=38.32 Aligned_cols=102 Identities=14% Similarity=0.153 Sum_probs=61.7
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee---eecCCceEEEEecC---CCEEEEEcC----C-
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV---CHDQGASSLVFAPQ---HQLLISAGK----K- 76 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~---~~~~~v~~~~~~~~---~~~l~~~~~----d- 76 (213)
.....|+|.|+|+++++- .++.|++++.. .. ..+..+. ........++++|+ +..|+.+.. +
T Consensus 29 ~~P~~ia~~pdG~l~V~e----~~g~I~~~d~~--G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~ 101 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVTE----RPGRLVLISPS--GK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGG 101 (354)
T ss_dssp SCEEEEEEEETTEEEEEE----TTTEEEEECSS--CE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGG
T ss_pred CCCeEEEEcCCCeEEEEe----CCCEEEEEeCC--Cc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCC
Confidence 457899999999988776 56999998731 11 2222211 12345789999997 445554432 2
Q ss_pred ---CcEEEEeccCc-------eEE-Eeccc-CCCCeeEEEecCCCCEEEEec
Q psy7433 77 ---GDICVIDLRQR-------VIR-SRFNA-HESPVKCLAIDPHEEFFVTGA 116 (213)
Q Consensus 77 ---~~v~iwd~~~~-------~~~-~~~~~-~~~~i~~~~~~~~~~~l~~~~ 116 (213)
..|..|+.... +.+ ..+.. .......++|.|++.++++.+
T Consensus 102 ~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 102 HIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp CEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred CcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 56777776543 111 11221 112346799999998776644
No 310
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.59 E-value=0.16 Score=38.81 Aligned_cols=173 Identities=8% Similarity=0.103 Sum_probs=106.6
Q ss_pred EEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCc-eEEE
Q psy7433 13 FVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR-VIRS 91 (213)
Q Consensus 13 ~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~-~~~~ 91 (213)
.-.+|..+.+|.- ...++.|+|+ +....++.+.- ...|.-=+|-.+. .|+..+ +..|+-|++... .+..
T Consensus 71 AIMnP~~~iiALr----ag~~lQiFnl---e~K~klks~~~-~e~VvfWkWis~~-~l~lVT-~taVyHWsi~~~s~P~k 140 (494)
T 1bpo_A 71 AIMNPASKVIALK----AGKTLQIFNI---EMKSKMKAHTM-TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVK 140 (494)
T ss_dssp EEECSSSSCEEEE----ETTEEEEEET---TTTEEEEEEEC-SSCCCEEEEEETT-EEEEEC-SSEEEEEESSSSCCCEE
T ss_pred eeeCCCCcEEEEe----cCCeEEEEch---HHhhhhcceec-CCCceEEEecCCC-eEEEEc-CCeeEEecccCCCCchh
Confidence 4467888888876 4789999999 55666666553 3456666665443 555553 458999999643 4444
Q ss_pred ecccC----CCCeeEEEecCCCCEEEEecC---CCcee------------------------------------------
Q psy7433 92 RFNAH----ESPVKCLAIDPHEEFFVTGAG---DGDIK------------------------------------------ 122 (213)
Q Consensus 92 ~~~~~----~~~i~~~~~~~~~~~l~~~~~---~~~i~------------------------------------------ 122 (213)
.+..| ...|..-..+++.++++..+- ++.+.
T Consensus 141 vFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~ 220 (494)
T 1bpo_A 141 MFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAV 220 (494)
T ss_dssp EEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEEE
T ss_pred heecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchheeeeeeeEEEecCCCCCCceEEEEEE
Confidence 44433 345667777777777664432 33222
Q ss_pred --------------------------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCC
Q psy7433 123 --------------------------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEH 164 (213)
Q Consensus 123 --------------------------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~ 164 (213)
.-..+|..++.-..+..-+.-|.|++||+.++.+++.-+-..
T Consensus 221 r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~ 300 (494)
T 1bpo_A 221 RGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG 300 (494)
T ss_dssp CSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred ecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccC
Confidence 122344444444566677778899999999999888776544
Q ss_pred CceeEEEecCCCeEEEEeCC-CCeEEEEecCCcEEEEeCCCC
Q psy7433 165 ARSSFFKHIGQGVTQLHVDG-GSRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 165 ~~~~~~~~~~~~v~~~~~~~-~~~l~s~~~d~~i~iw~~~~~ 205 (213)
.+|-..+-++ .+=++.....|.|.--.+.+.
T Consensus 301 ----------~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~ 332 (494)
T 1bpo_A 301 ----------ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE 332 (494)
T ss_dssp ----------SCEEEEEEETTTTEEEEEETTCEEEEEEECTT
T ss_pred ----------CceEEecccCCCCcEEEEccCceEEEEEEccc
Confidence 3444433332 233555557777666666554
No 311
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.46 E-value=0.17 Score=37.53 Aligned_cols=104 Identities=13% Similarity=0.099 Sum_probs=58.4
Q ss_pred CceEEEEEeCCCC-eEEEeeccCCCccEEEEeCCCcccccceeee----eeecCCceEEEEecC---CCEEEEEc-C---
Q psy7433 8 KITSDFVFLGSCS-LVATAGHSSESKNVCLWDSLLPQKKALVQAF----VCHDQGASSLVFAPQ---HQLLISAG-K--- 75 (213)
Q Consensus 8 ~~v~~~~~~~~~~-~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~----~~~~~~v~~~~~~~~---~~~l~~~~-~--- 75 (213)
...+.|+|.|+|+ ++++- ..+.|++++... .....+..+ .........++++|+ +..|+... .
T Consensus 18 ~~P~~i~~~pdG~~l~V~e----~~G~i~~~~~~g-~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~ 92 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITL----RGGELRHWQAGK-GLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGD 92 (353)
T ss_dssp SSEEEEEECSTTCCEEEEE----TTTEEEEEETTT-EECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECS
T ss_pred CCcEEEEEcCCCCEEEEEe----CCceEEEEeCCC-ceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCC
Confidence 4568999999999 77765 578999998521 111111111 112345689999995 44554442 2
Q ss_pred ----CCcEEEEeccCc-------eEE-Eeccc---CCCCeeEEEecCCCCEEEEec
Q psy7433 76 ----KGDICVIDLRQR-------VIR-SRFNA---HESPVKCLAIDPHEEFFVTGA 116 (213)
Q Consensus 76 ----d~~v~iwd~~~~-------~~~-~~~~~---~~~~i~~~~~~~~~~~l~~~~ 116 (213)
...|..|++... +.+ ..+.. .......++|.|++.++++.+
T Consensus 93 ~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 148 (353)
T 2g8s_A 93 DGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALG 148 (353)
T ss_dssp SSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEEC
T ss_pred CCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEEC
Confidence 234666665432 111 11221 112246799999997666543
No 312
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.38 E-value=0.16 Score=36.41 Aligned_cols=172 Identities=15% Similarity=0.150 Sum_probs=83.0
Q ss_pred CCCeEEEeeccC--CCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCC-----cEEEEeccCceEE
Q psy7433 18 SCSLVATAGHSS--ESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKG-----DICVIDLRQRVIR 90 (213)
Q Consensus 18 ~~~~l~~~g~~s--~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~v~iwd~~~~~~~ 90 (213)
++.+++.||... .-..+.+||..+. +...+..+.........+. .++.+++.|+.++ .+.+||+.+.+-.
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~ 137 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKD-QWTSVANMRDRRSTLGAAV--LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWF 137 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTT-EEEEECCCSSCCBSCEEEE--ETTEEEEEEEECSSCEEEEEEEEETTTTEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCC-ceeeCCCCCccccceEEEE--ECCEEEEEcCCCCCccCceEEEEeCCCCeEe
Confidence 567777776411 1246888887432 2223322222222222222 2566777776553 4778888776533
Q ss_pred Ee--cccCCCCeeEEEecCCCCEEEEecCCCce---e-----------------------eceEEEEEccCCceEEEecC
Q psy7433 91 SR--FNAHESPVKCLAIDPHEEFFVTGAGDGDI---K-----------------------SPVKCLAIDPHEEFFVTGAG 142 (213)
Q Consensus 91 ~~--~~~~~~~i~~~~~~~~~~~l~~~~~~~~i---~-----------------------~~v~~~~~~~~~~~l~~~~~ 142 (213)
.. ++...... +++. -+++.++.|+.++.- . .....+.+ ++++++.|+.
T Consensus 138 ~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~ 213 (302)
T 2xn4_A 138 HVAPMNTRRSSV-GVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGH 213 (302)
T ss_dssp EECCCSSCCBSC-EEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCB
T ss_pred ecCCCCCcccCc-eEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCC
Confidence 22 22111111 2222 256677777654321 1 11111112 4667777765
Q ss_pred C-----CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCC-----cEEEEeCCCC
Q psy7433 143 D-----GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADG-----SMKVRQLPDR 205 (213)
Q Consensus 143 d-----g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~-----~i~iw~~~~~ 205 (213)
+ ..+.+||+.+.+-...-...... .... +....+..++.|+.++ .+.+||..+.
T Consensus 214 ~~~~~~~~~~~yd~~~~~W~~~~~~~~~r--------~~~~-~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 214 DGPLVRKSVEVYDPTTNAWRQVADMNMCR--------RNAG-VCAVNGLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp SSSSBCCCEEEEETTTTEEEEECCCSSCC--------BSCE-EEEETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCCcccceEEEEeCCCCCEeeCCCCCCcc--------ccCe-EEEECCEEEEECCcCCCcccccEEEEcCCCC
Confidence 4 36888998766543222111110 1112 2222344566666553 4788888754
No 313
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.32 E-value=0.17 Score=36.17 Aligned_cols=173 Identities=12% Similarity=0.062 Sum_probs=85.2
Q ss_pred CCCeEEEeeccC--CCccEEEEeCCCccc--ccceeeeeeecCCceEEEEecCCCEEEEEcCC-----CcEEEEeccCce
Q psy7433 18 SCSLVATAGHSS--ESKNVCLWDSLLPQK--KALVQAFVCHDQGASSLVFAPQHQLLISAGKK-----GDICVIDLRQRV 88 (213)
Q Consensus 18 ~~~~l~~~g~~s--~~~~i~iwd~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~iwd~~~~~ 88 (213)
++.+++.||... ....+.+||..+... ...+..+........++.. ++++++.|+.+ ..+.+||..+.+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 567777776311 124688999853220 2233222222222222222 66677777643 358889987764
Q ss_pred EE--EecccCCCCeeEEEecCCCCEEEEecCCCcee------------------------eceEEEEEccCCceEEEecC
Q psy7433 89 IR--SRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------------SPVKCLAIDPHEEFFVTGAG 142 (213)
Q Consensus 89 ~~--~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------------~~v~~~~~~~~~~~l~~~~~ 142 (213)
-. ..++........+. -+++.++.|+.++.-. .....+. -++++++.|+.
T Consensus 140 W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~ 215 (301)
T 2vpj_A 140 WSMLGDMQTAREGAGLVV--ASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL--LNDHIYVVGGF 215 (301)
T ss_dssp EEEEEECSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCB
T ss_pred EEECCCCCCCcccceEEE--ECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE--ECCEEEEEeCC
Confidence 33 23322111122222 2577777777654311 1111111 24567777765
Q ss_pred C-----CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecC-----CcEEEEeCCCC
Q psy7433 143 D-----GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGAD-----GSMKVRQLPDR 205 (213)
Q Consensus 143 d-----g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d-----~~i~iw~~~~~ 205 (213)
+ ..+.+||+.+.+-...-...... .....+.. .+..++.|+.+ ..+.+||..+.
T Consensus 216 ~~~~~~~~v~~yd~~~~~W~~~~~~p~~r--------~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 216 DGTAHLSSVEAYNIRTDSWTTVTSMTTPR--------CYVGATVL-RGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp CSSSBCCCEEEEETTTTEEEEECCCSSCC--------BSCEEEEE-TTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred CCCcccceEEEEeCCCCcEEECCCCCCcc--------cceeEEEE-CCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 4 46889999776543322111111 11222222 34456666655 35778887754
No 314
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.22 E-value=0.29 Score=37.71 Aligned_cols=105 Identities=11% Similarity=0.102 Sum_probs=60.4
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeee------ecCCceEEEEecC---CCEEEEEcC---
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVC------HDQGASSLVFAPQ---HQLLISAGK--- 75 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~------~~~~v~~~~~~~~---~~~l~~~~~--- 75 (213)
...+.|+|.|+|+++++- ...+.|++++.... ....+..+.. .......++|+|+ +..|+....
T Consensus 27 ~~P~~~a~~pdG~l~V~e---~~gg~I~~~~~~~g-~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~ 102 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTE---RATGKILRVNPESG-SVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKN 102 (454)
T ss_dssp SSEEEEEECTTSCEEEEE---TTTCEEEEECTTTC-CEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEEC
T ss_pred CCceEEEEcCCCcEEEEE---cCCCEEEEEECCCC-cEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccc
Confidence 456799999999999887 34457888875321 1112222211 2345679999995 555554432
Q ss_pred ----------CCcEEEEeccCc-------eEEE-eccc-CCCCeeEEEecCCCCEEEEec
Q psy7433 76 ----------KGDICVIDLRQR-------VIRS-RFNA-HESPVKCLAIDPHEEFFVTGA 116 (213)
Q Consensus 76 ----------d~~v~iwd~~~~-------~~~~-~~~~-~~~~i~~~~~~~~~~~l~~~~ 116 (213)
...|.-++.... +.+. .+.. .......|+|.|++.++++.+
T Consensus 103 ~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 103 PKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp TTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred cCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 134555554321 1111 1221 123468899999998777654
No 315
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.01 E-value=0.27 Score=35.51 Aligned_cols=100 Identities=8% Similarity=-0.030 Sum_probs=47.1
Q ss_pred EeCCCCeEEEeecc----CC----CccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC--------Cc
Q psy7433 15 FLGSCSLVATAGHS----SE----SKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK--------GD 78 (213)
Q Consensus 15 ~~~~~~~l~~~g~~----s~----~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~ 78 (213)
...++.+++.||.. .. ...+.+||..+. +...+..+.........+.+ ++.+++.|+.+ ..
T Consensus 42 ~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~ 118 (315)
T 4asc_A 42 VTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDS-EWLGMPPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDS 118 (315)
T ss_dssp ECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTT-EEEECCCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCC
T ss_pred EEECCEEEEEcCcccCCCCCccccccceEEecCCCC-eEEECCCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccce
Confidence 34577888888730 11 123777887432 22222222211111122222 56666777632 45
Q ss_pred EEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecC
Q psy7433 79 ICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAG 117 (213)
Q Consensus 79 v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 117 (213)
+.+||..+.+-...-..........+..-+++.++.|+.
T Consensus 119 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 157 (315)
T 4asc_A 119 VMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGK 157 (315)
T ss_dssp EEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCB
T ss_pred EEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCC
Confidence 889999876533221111111112222235667777775
No 316
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.99 E-value=0.27 Score=35.31 Aligned_cols=94 Identities=10% Similarity=0.084 Sum_probs=49.0
Q ss_pred CCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC----CcEEEEeccCceEEE--e
Q psy7433 19 CSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK----GDICVIDLRQRVIRS--R 92 (213)
Q Consensus 19 ~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~v~iwd~~~~~~~~--~ 92 (213)
+.+++.||. .....+.+||.... +...+..+......-..+. .++.+++.|+.+ ..+.+||..+.+-.. .
T Consensus 12 ~~l~~~GG~-~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~ 87 (306)
T 3ii7_A 12 DYRIALFGG-SQPQSCRYFNPKDY-SWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLG 87 (306)
T ss_dssp CEEEEEECC-SSTTSEEEEETTTT-EEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEEC
T ss_pred ceEEEEeCC-CCCceEEEecCCCC-CEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCC
Confidence 446666764 33678999998532 2233332222222222222 366677777754 568889988765332 2
Q ss_pred cccCCCCeeEEEecCCCCEEEEecCC
Q psy7433 93 FNAHESPVKCLAIDPHEEFFVTGAGD 118 (213)
Q Consensus 93 ~~~~~~~i~~~~~~~~~~~l~~~~~~ 118 (213)
++........+. -+++.++.|+.+
T Consensus 88 ~p~~r~~~~~~~--~~~~iyv~GG~~ 111 (306)
T 3ii7_A 88 PPTPRDSLAACA--AEGKIYTSGGSE 111 (306)
T ss_dssp CSSCCBSCEEEE--ETTEEEEECCBB
T ss_pred CCccccceeEEE--ECCEEEEECCCC
Confidence 221111122222 256777777755
No 317
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.93 E-value=0.4 Score=36.88 Aligned_cols=54 Identities=13% Similarity=0.270 Sum_probs=35.6
Q ss_pred cCCceEEEEecCCCEEEEEcCCCcEEEEeccCceE--EEeccc------CCCCeeEEEecCC
Q psy7433 55 DQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVI--RSRFNA------HESPVKCLAIDPH 108 (213)
Q Consensus 55 ~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~--~~~~~~------~~~~i~~~~~~~~ 108 (213)
-.....++|.|+|+++++-...+.|.+++..+++. +..+.. .......|+++|+
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd 87 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCC
Confidence 34567999999998777655445788887655532 223321 2345678999995
No 318
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.88 E-value=0.35 Score=35.79 Aligned_cols=106 Identities=8% Similarity=0.108 Sum_probs=62.5
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeee----eeecCCceEEEEecC---CCEEEEE---cCC
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAF----VCHDQGASSLVFAPQ---HQLLISA---GKK 76 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~----~~~~~~v~~~~~~~~---~~~l~~~---~~d 76 (213)
-...+.|+|.|+|+++++- ...|.|++++.... ....+..+ .........++++|+ +..|+.. ..+
T Consensus 31 L~~P~~ia~~pdG~llVte---r~~G~I~~v~~~~g-~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~ 106 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSS---RDEATITRVDAKTG-RKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASD 106 (347)
T ss_dssp CSSEEEEEECTTSCEEEEE---TTTCEEEEECTTTC-CEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSS
T ss_pred CCCceEEEEcCCCcEEEEE---ecCCEEEEEECCCC-cEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCC
Confidence 3467899999999999987 44899999975321 11112111 122456789999995 3444432 234
Q ss_pred CcEEEEeccCc----------eEE-Eeccc-CCCCeeEEEecCCCCEEEEec
Q psy7433 77 GDICVIDLRQR----------VIR-SRFNA-HESPVKCLAIDPHEEFFVTGA 116 (213)
Q Consensus 77 ~~v~iwd~~~~----------~~~-~~~~~-~~~~i~~~~~~~~~~~l~~~~ 116 (213)
+.|.-|.+..+ +.+ ..+.. .......|.|.|++.++++.+
T Consensus 107 ~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 107 NRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred CEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 45655655431 111 12221 112345799999998777754
No 319
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.87 E-value=0.3 Score=34.92 Aligned_cols=172 Identities=13% Similarity=0.164 Sum_probs=83.0
Q ss_pred CCCeEEEee-cc--CCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC-----CcEEEEeccCce-
Q psy7433 18 SCSLVATAG-HS--SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK-----GDICVIDLRQRV- 88 (213)
Q Consensus 18 ~~~~l~~~g-~~--s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~iwd~~~~~- 88 (213)
++.+++.|| .. .....+.+||.... +...+..+.........+ ..++.+++.|+.+ ..+.+||..+.+
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~~~~--~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~ 90 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQ-EWSFLPSITRKRRYVASV--SLHDRIYVIGGYDGRSRLSSVECLDYTADED 90 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTT-EEEECCCCSSCCBSCEEE--EETTEEEEECCBCSSCBCCCEEEEETTCCTT
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCC-eEEeCCCCChhhccccEE--EECCEEEEEcCCCCCccCceEEEEECCCCCC
Confidence 566777775 20 12347888987432 222222222211222222 2356677777754 468899987754
Q ss_pred --E--EEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------------eceEEEEEccCCceEEEe
Q psy7433 89 --I--RSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------------SPVKCLAIDPHEEFFVTG 140 (213)
Q Consensus 89 --~--~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------------~~v~~~~~~~~~~~l~~~ 140 (213)
. +..++........+. .+++.++.|+.++.-. .....+. -++++++.|
T Consensus 91 ~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~G 166 (301)
T 2vpj_A 91 GVWYSVAPMNVRRGLAGATT--LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV--ASGVIYCLG 166 (301)
T ss_dssp CCCEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE--ETTEEEEEC
T ss_pred CeeEECCCCCCCccceeEEE--ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE--ECCEEEEEC
Confidence 2 222221111122222 2567777776554321 1111111 246667777
Q ss_pred cCC-----CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecC-----CcEEEEeCCCC
Q psy7433 141 AGD-----GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGAD-----GSMKVRQLPDR 205 (213)
Q Consensus 141 ~~d-----g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d-----~~i~iw~~~~~ 205 (213)
+.+ ..+.+||+.+.+-...-...... .....+. ..+..++.|+.+ ..+.+||..+.
T Consensus 167 G~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r--------~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 232 (301)
T 2vpj_A 167 GYDGLNILNSVEKYDPHTGHWTNVTPMATKR--------SGAGVAL-LNDHIYVVGGFDGTAHLSSVEAYNIRTD 232 (301)
T ss_dssp CBCSSCBCCCEEEEETTTTEEEEECCCSSCC--------BSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCCCCcccceEEEEeCCCCcEEeCCCCCccc--------ccceEEE-ECCEEEEEeCCCCCcccceEEEEeCCCC
Confidence 654 45888888766443321111110 1112222 233445666653 46788887754
No 320
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.86 E-value=0.31 Score=34.99 Aligned_cols=174 Identities=10% Similarity=0.097 Sum_probs=83.3
Q ss_pred CCCeEEEeecc-CCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC------CcEEEEeccCceEE
Q psy7433 18 SCSLVATAGHS-SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK------GDICVIDLRQRVIR 90 (213)
Q Consensus 18 ~~~~l~~~g~~-s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~v~iwd~~~~~~~ 90 (213)
++.+++.||.. ..-..+.+||.... +...+..+.........+. .++++++.|+.+ ..+.+||..+.+-.
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~ 131 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKD-SWYSKLGPPTPRDSLAACA--AEGKIYTSGGSEVGNSALYLFECYDTRTESWH 131 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTT-EEEEEECCSSCCBSCEEEE--ETTEEEEECCBBTTBSCCCCEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCC-eEEECCCCCccccceeEEE--ECCEEEEECCCCCCCcEeeeEEEEeCCCCceE
Confidence 56677777631 11256788887432 2223322222222222222 266677777754 45889999877543
Q ss_pred EecccCCCCeeEEEecCCCCEEEEecCCCc------ee----------------------eceEEEEEccCCceEEEecC
Q psy7433 91 SRFNAHESPVKCLAIDPHEEFFVTGAGDGD------IK----------------------SPVKCLAIDPHEEFFVTGAG 142 (213)
Q Consensus 91 ~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~------i~----------------------~~v~~~~~~~~~~~l~~~~~ 142 (213)
..-..........+..-+++.++.|+.++. .. .....+.+ ++++++.|+.
T Consensus 132 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~ 209 (306)
T 3ii7_A 132 TKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQ 209 (306)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCE
T ss_pred eCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCC
Confidence 321111111111111225667777764322 11 11111111 4566777765
Q ss_pred C-----CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecC-----CcEEEEeCCCC
Q psy7433 143 D-----GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGAD-----GSMKVRQLPDR 205 (213)
Q Consensus 143 d-----g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d-----~~i~iw~~~~~ 205 (213)
+ ..+.+||+.+.+-...-..+... .....+.+ .+..++.|+.+ ..+.+||..+.
T Consensus 210 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r--------~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 210 NGLGGLDNVEYYDIKLNEWKMVSPMPWKG--------VTVKCAAV-GSIVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp ETTEEBCCEEEEETTTTEEEECCCCSCCB--------SCCEEEEE-TTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred CCCCCCceEEEeeCCCCcEEECCCCCCCc--------cceeEEEE-CCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 3 35788888766433221111110 12222333 34456667644 46788888764
No 321
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.85 E-value=0.61 Score=41.24 Aligned_cols=93 Identities=8% Similarity=0.149 Sum_probs=55.7
Q ss_pred EEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCc-eEEEe
Q psy7433 14 VFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR-VIRSR 92 (213)
Q Consensus 14 ~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~-~~~~~ 92 (213)
-.+|..+.+|.- ...++.|+|+ .+...++.+.- ..+|.-=+|-.+ +.|+..+ +..|.-|++... .+...
T Consensus 72 IMnP~~~iiALr----ag~~lQiFnl---~~k~klks~~~-~e~VvfWkWis~-~~l~lVT-~~aVyHW~~~~~s~P~k~ 141 (1630)
T 1xi4_A 72 IMNPASKVIALK----AGKTLQIFNI---EMKSKMKAHTM-TDDVTFWKWISL-NTVALVT-DNAVYHWSMEGESQPVKM 141 (1630)
T ss_pred ccCCCcceEEEe----cCCeEEEeeh---HHhhhhccccc-CCCceEEEecCC-CeeEEEc-CCeEEEeccCCCCccHHH
Confidence 356777777776 4789999999 55556665543 344555555433 3455443 458999999642 33333
Q ss_pred cccC----CCCeeEEEecCCCCEEEEec
Q psy7433 93 FNAH----ESPVKCLAIDPHEEFFVTGA 116 (213)
Q Consensus 93 ~~~~----~~~i~~~~~~~~~~~l~~~~ 116 (213)
+..| ...|..-..+++.++++..+
T Consensus 142 fdR~~~L~~~QIinY~~d~~~kW~~l~g 169 (1630)
T 1xi4_A 142 FDRHSSLAGCQIINYRTDAKQKWLLLTG 169 (1630)
T ss_pred HhcchhcccCeeEEeeeCCCCCeEEEEe
Confidence 3322 34566666677777655433
No 322
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.80 E-value=0.32 Score=34.78 Aligned_cols=97 Identities=13% Similarity=0.103 Sum_probs=47.1
Q ss_pred CCCeEEEeeccC-CCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC-----CcEEEEeccCceEEE
Q psy7433 18 SCSLVATAGHSS-ESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK-----GDICVIDLRQRVIRS 91 (213)
Q Consensus 18 ~~~~l~~~g~~s-~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~iwd~~~~~~~~ 91 (213)
++.+++.||... .-..+.+||.... ....+..++.....-..+. .++.+++.|+.+ ..+..||..+.+-..
T Consensus 15 ~~~i~v~GG~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~ 91 (302)
T 2xn4_A 15 PKLMVVVGGQAPKAIRSVECYDFKEE-RWHQVAELPSRRCRAGMVY--MAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTS 91 (302)
T ss_dssp CEEEEEECCBSSSBCCCEEEEETTTT-EEEEECCCSSCCBSCEEEE--ETTEEEEESCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CCEEEEECCCCCCCCCcEEEEcCcCC-cEeEcccCCcccccceEEE--ECCEEEEEeCcCCCccccceEEECCCCCceee
Confidence 456777776311 1246888887432 2222222221111112222 266677777754 358889988765332
Q ss_pred e--cccCCCCeeEEEecCCCCEEEEecCCC
Q psy7433 92 R--FNAHESPVKCLAIDPHEEFFVTGAGDG 119 (213)
Q Consensus 92 ~--~~~~~~~i~~~~~~~~~~~l~~~~~~~ 119 (213)
. ++........+. -+++.++.|+.++
T Consensus 92 ~~~~p~~r~~~~~~~--~~~~iyv~GG~~~ 119 (302)
T 2xn4_A 92 VANMRDRRSTLGAAV--LNGLLYAVGGFDG 119 (302)
T ss_dssp ECCCSSCCBSCEEEE--ETTEEEEEEEECS
T ss_pred CCCCCccccceEEEE--ECCEEEEEcCCCC
Confidence 2 221111112222 2567777777554
No 323
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.69 E-value=0.43 Score=35.37 Aligned_cols=173 Identities=10% Similarity=0.030 Sum_probs=89.2
Q ss_pred CceEEEEEeCC----CCeEEEeeccCC---C----ccEEEEeCCCcc----cccc-eeeeee-ecCCceEEEEecCCCEE
Q psy7433 8 KITSDFVFLGS----CSLVATAGHSSE---S----KNVCLWDSLLPQ----KKAL-VQAFVC-HDQGASSLVFAPQHQLL 70 (213)
Q Consensus 8 ~~v~~~~~~~~----~~~l~~~g~~s~---~----~~i~iwd~~~~~----~~~~-~~~~~~-~~~~v~~~~~~~~~~~l 70 (213)
.....|+++|+ +.++++- +. + ..|..|+..... ..+. +..+.. .......++|.|+|.+.
T Consensus 73 ~g~~gia~~pdf~~~g~lyv~~---~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Ly 149 (354)
T 3a9g_A 73 AGLLGLALHPEFPKKSWVYLYA---SYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLY 149 (354)
T ss_dssp CSEEEEEECTTTTTSCEEEEEE---EEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEE
T ss_pred CceeeEEeCCCCCcCCEEEEEE---eccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEE
Confidence 45788999997 4444443 21 2 567777763210 0111 111221 11234679999999876
Q ss_pred EEEcCC-------------CcEEEEeccCce-------EEEecccCCCCeeEEEecC-CCCEEEEecCCCc---ee----
Q psy7433 71 ISAGKK-------------GDICVIDLRQRV-------IRSRFNAHESPVKCLAIDP-HEEFFVTGAGDGD---IK---- 122 (213)
Q Consensus 71 ~~~~~d-------------~~v~iwd~~~~~-------~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~---i~---- 122 (213)
++.+.. |.|.-++....- ....+...-.....++|+| ++..+++-..... +.
T Consensus 150 vt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~ 229 (354)
T 3a9g_A 150 ITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILK 229 (354)
T ss_dssp EECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECT
T ss_pred EEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecC
Confidence 664432 344444443210 0011111112346899999 5665554322110 00
Q ss_pred -----------------------------eceEEEEEc-------cCCceEEEecCCCcEEEEEccCC-eee--eeecCC
Q psy7433 123 -----------------------------SPVKCLAID-------PHEEFFVTGAGDGDIKVWSLSGN-HLL--YNFPGE 163 (213)
Q Consensus 123 -----------------------------~~v~~~~~~-------~~~~~l~~~~~dg~i~v~d~~~~-~~~--~~~~~~ 163 (213)
..+..++|. .+|.++++.-..+.|...++... +.. ..+...
T Consensus 230 G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~ 309 (354)
T 3a9g_A 230 GGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKN 309 (354)
T ss_dssp TCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTT
T ss_pred CCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccC
Confidence 235667773 45666766666677888887642 221 122111
Q ss_pred CCceeEEEecCCCeEEEEeCCCCeEEEEe
Q psy7433 164 HARSSFFKHIGQGVTQLHVDGGSRLFSCG 192 (213)
Q Consensus 164 ~~~~~~~~~~~~~v~~~~~~~~~~l~s~~ 192 (213)
. ...+..+++.|++.|+...
T Consensus 310 ~---------~~rp~~v~~~pDG~lyv~~ 329 (354)
T 3a9g_A 310 V---------FGRLRDVVIDDDGGILIST 329 (354)
T ss_dssp T---------SCCEEEEEECTTSCEEEEE
T ss_pred C---------CCCeeEEEECCCCcEEEEE
Confidence 0 2568899999987655544
No 324
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.63 E-value=0.75 Score=37.75 Aligned_cols=174 Identities=12% Similarity=0.111 Sum_probs=96.8
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCc
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR 87 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~ 87 (213)
..|.++....++.+.+.+ .+| +..||... .............|.++.. .++ .|..++.+ -+..+|..++
T Consensus 63 ~~i~~i~~d~~g~lWigT----~~G-l~~yd~~~---~~f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~ 131 (758)
T 3ott_A 63 TRIYCGVIIDNTYLYMGT----DNG-ILVYNYRA---DRYEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSR 131 (758)
T ss_dssp SCEEEEEEETTTEEEEEE----TTE-EEEEETTT---TEECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTC
T ss_pred ceEEEEEEcCCCcEEEEe----CCC-eEEEeCCC---CEEECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCC
Confidence 468888877777665544 444 78899732 2111111111234666654 355 45555555 5778888765
Q ss_pred eEEEecc----cCCCCeeEEEecCCCCEEEEecCCCcee---------------------eceEEEEEccCCceEEEecC
Q psy7433 88 VIRSRFN----AHESPVKCLAIDPHEEFFVTGAGDGDIK---------------------SPVKCLAIDPHEEFFVTGAG 142 (213)
Q Consensus 88 ~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------------~~v~~~~~~~~~~~l~~~~~ 142 (213)
+...... .....|.++...+++...+ ++.+|..+ ..|.++...+++..|..|+.
T Consensus 132 ~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~ 210 (758)
T 3ott_A 132 KLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYNGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE 210 (758)
T ss_dssp CEEEECHHHHCCSCSCEEEEEECTTCCEEE-EETTEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE
T ss_pred eEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCCCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC
Confidence 4332201 1234577887777776544 33444322 12667777776664445554
Q ss_pred CCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCC
Q psy7433 143 DGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 143 dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 205 (213)
+-+..+|..+++... +... ....|.++...+++.|..|+. +-+.+++..+.
T Consensus 211 -~Gl~~~~~~~~~~~~-~~~l---------~~~~i~~i~~d~~g~lWigT~-~Gl~~~~~~~~ 261 (758)
T 3ott_A 211 -GYLFQYFPSTGQIKQ-TEAF---------HNNSIKSLALDGNGDLLAGTD-NGLYVYHNDTT 261 (758)
T ss_dssp -EEEEEEETTTTEEEE-EEEE---------EEEEEEEEEECTTCCEEEEET-TEEEEECCTTS
T ss_pred -CCCeEEcCCCCeEEe-ccCC---------CCCeEEEEEEcCCCCEEEEeC-CceeEEecCCC
Confidence 457778876654321 1100 014588888887777766764 45777776553
No 325
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.48 E-value=0.22 Score=37.00 Aligned_cols=75 Identities=9% Similarity=0.102 Sum_probs=47.1
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec-CCCEEEEEcCC-CcEEEEecc
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP-QHQLLISAGKK-GDICVIDLR 85 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d-~~v~iwd~~ 85 (213)
...+.++|+||++.|..+. +..+.|..|++.........+.+ ......-.+++.+ +|++.+++..+ +.|..|+..
T Consensus 221 ~~pNGia~spDg~~lYvad--t~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 221 DFANGINISPDGKYVYIAE--LLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp SSEEEEEECTTSSEEEEEE--GGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESCHHHHHSCCTT
T ss_pred cccCcceECCCCCEEEEEe--CCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCCceEEEEECCC
Confidence 3467899999998877764 56788999998522222222233 2234566788888 58877766543 344444443
No 326
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.42 E-value=0.47 Score=34.11 Aligned_cols=173 Identities=10% Similarity=0.072 Sum_probs=83.1
Q ss_pred CCCCeEEEeec-cCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcC----C-----CcEEEEeccC
Q psy7433 17 GSCSLVATAGH-SSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGK----K-----GDICVIDLRQ 86 (213)
Q Consensus 17 ~~~~~l~~~g~-~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d-----~~v~iwd~~~ 86 (213)
-++.+++.||. ...-..+.+||.... +...+..++.....- +++ ..++.+++.|+. + ..+.+||..+
T Consensus 23 ~~~~i~v~GG~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~-~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~ 99 (308)
T 1zgk_A 23 VGRLIYTAGGYFRQSLSYLEAYNPSNG-TWLRLADLQVPRSGL-AGC-VVGGLLYAVGGRNNSPDGNTDSSALDCYNPMT 99 (308)
T ss_dssp CCCCEEEECCBSSSBCCCEEEEETTTT-EEEECCCCSSCCBSC-EEE-EETTEEEEECCEEEETTEEEECCCEEEEETTT
T ss_pred CCCEEEEEeCcCCCCcceEEEEcCCCC-eEeECCCCCcccccc-eEE-EECCEEEEECCCcCCCCCCeecceEEEECCCC
Confidence 36777888863 112246888987432 222222222211222 222 226667777765 2 3588899887
Q ss_pred ceEEEe--cccCCCCeeEEEecCCCCEEEEecCCCcee------------------------eceEEEEEccCCceEEEe
Q psy7433 87 RVIRSR--FNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------------SPVKCLAIDPHEEFFVTG 140 (213)
Q Consensus 87 ~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------------~~v~~~~~~~~~~~l~~~ 140 (213)
.+-... ++........+.+ +++.++.|+.++.-. .....+.+ ++++++.|
T Consensus 100 ~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~G 175 (308)
T 1zgk_A 100 NQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVG 175 (308)
T ss_dssp TEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEC
T ss_pred CeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEe
Confidence 653322 2211111122222 567777776443211 11111222 46667777
Q ss_pred cCC-----CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecC-----CcEEEEeCCCC
Q psy7433 141 AGD-----GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGAD-----GSMKVRQLPDR 205 (213)
Q Consensus 141 ~~d-----g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d-----~~i~iw~~~~~ 205 (213)
+.+ ..+.+||+.+.+-...-...... ..-..+.+ .+..++.|+.+ ..+.+||+.+.
T Consensus 176 G~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r--------~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 176 GFDGTNRLNSAECYYPERNEWRMITAMNTIR--------SGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp CBCSSCBCCCEEEEETTTTEEEECCCCSSCC--------BSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCCCCCcCceEEEEeCCCCeEeeCCCCCCcc--------ccceEEEE-CCEEEEEeCCCCCCccceEEEEeCCCC
Confidence 654 45888888765433221111110 11222222 34445666654 45788887654
No 327
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.39 E-value=0.49 Score=34.04 Aligned_cols=172 Identities=13% Similarity=0.190 Sum_probs=83.4
Q ss_pred CCCeEEEeecc------CCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC-----CcEEEEeccC
Q psy7433 18 SCSLVATAGHS------SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK-----GDICVIDLRQ 86 (213)
Q Consensus 18 ~~~~l~~~g~~------s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~iwd~~~ 86 (213)
++.+++.||.. .....+.+||..+. +...+..+.........+.+ ++++++.|+.+ ..+..||..+
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~ 146 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTN-QWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPER 146 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTT-EEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCC-eEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCC
Confidence 56677777520 01246788887432 22222222222222222222 66677777643 3588899887
Q ss_pred ceEEEe--cccCCCCeeEEEecCCCCEEEEecCCCcee------------------------eceEEEEEccCCceEEEe
Q psy7433 87 RVIRSR--FNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------------SPVKCLAIDPHEEFFVTG 140 (213)
Q Consensus 87 ~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------------~~v~~~~~~~~~~~l~~~ 140 (213)
.+-... ++........+.+ +++.++.|+.++.-. .....+.+ ++++++.|
T Consensus 147 ~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~G 222 (308)
T 1zgk_A 147 DEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAG 222 (308)
T ss_dssp TEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEC
T ss_pred CeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEe
Confidence 654322 2211111122222 567777776554321 11112222 56677777
Q ss_pred cCC-----CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecC-----CcEEEEeCCCC
Q psy7433 141 AGD-----GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGAD-----GSMKVRQLPDR 205 (213)
Q Consensus 141 ~~d-----g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d-----~~i~iw~~~~~ 205 (213)
+.+ ..+.+||+.+.+-...-.....+ .... +....+..++.|+.+ ..+.+||..+.
T Consensus 223 G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r--------~~~~-~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 223 GYDGQDQLNSVERYDVETETWTFVAPMKHRR--------SALG-ITVHQGRIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp CBCSSSBCCCEEEEETTTTEEEECCCCSSCC--------BSCE-EEEETTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred CCCCCCccceEEEEeCCCCcEEECCCCCCCc--------cceE-EEEECCEEEEEcCcCCCcccceEEEEcCCCC
Confidence 654 46889998776543222111110 1122 222234456666643 45778887754
No 328
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.35 E-value=0.32 Score=38.45 Aligned_cols=106 Identities=10% Similarity=0.066 Sum_probs=68.7
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccc---------ccc-eeeeeeecCCceEEEEecCCCEEEEEcCCCc
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQK---------KAL-VQAFVCHDQGASSLVFAPQHQLLISAGKKGD 78 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~---------~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 78 (213)
..-.+.++|||++++.+| -.+.++.++|++.... ... ....+ -.......+|.++|+-..+-..|.+
T Consensus 324 sPHGv~vsPDGkyi~v~G--KLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSq 400 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAG--KLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQ 400 (638)
T ss_dssp SCCCEEECTTSCEEEEEC--TTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTE
T ss_pred CCcceeeCCCCCEEEEcC--CCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecce
Confidence 345678899999999987 5889999999842100 011 11121 2345677899999965566678999
Q ss_pred EEEEeccCc----------eEEEecccCCCCeeEEE-----ecCCCCEEEEecC
Q psy7433 79 ICVIDLRQR----------VIRSRFNAHESPVKCLA-----IDPHEEFFVTGAG 117 (213)
Q Consensus 79 v~iwd~~~~----------~~~~~~~~~~~~i~~~~-----~~~~~~~l~~~~~ 117 (213)
|..|++... ..+.++.-|-.+-.-.+ -.|+|++|++...
T Consensus 401 vvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK 454 (638)
T 3sbq_A 401 VVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSK 454 (638)
T ss_dssp EEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEES
T ss_pred EEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecc
Confidence 999999753 34555554433322221 2568888887654
No 329
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.34 E-value=0.58 Score=34.62 Aligned_cols=55 Identities=18% Similarity=0.206 Sum_probs=38.2
Q ss_pred ecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceE--EEecc----cCCCCeeEEEecCC
Q psy7433 54 HDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVI--RSRFN----AHESPVKCLAIDPH 108 (213)
Q Consensus 54 ~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~--~~~~~----~~~~~i~~~~~~~~ 108 (213)
.-.....++|.|+|.++++--..|.|++++..+++. +..+. ........|+++|+
T Consensus 30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pd 90 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPD 90 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTT
T ss_pred CCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccc
Confidence 345678999999998777765589999998665543 22221 23456788999985
No 330
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=94.97 E-value=1.7 Score=37.84 Aligned_cols=163 Identities=12% Similarity=0.076 Sum_probs=87.1
Q ss_pred CCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEE-ecccCCCCeeEEEecCC
Q psy7433 30 ESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRS-RFNAHESPVKCLAIDPH 108 (213)
Q Consensus 30 ~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~-~~~~~~~~i~~~~~~~~ 108 (213)
..|.|.++++.. .+.+.+.. ...++.+++++-. +|.++++. ...|++|++...+.+. ...... .+..+.....
T Consensus 862 ~~Gri~vf~v~~-~kL~lv~~-~~v~g~v~al~~~-~g~Lla~i--g~~l~vy~l~~~~~L~~~~~~~~-~i~~~~l~~~ 935 (1158)
T 3ei3_A 862 KQGRIVVFQYSD-GKLQTVAE-KEVKGAVYSMVEF-NGKLLASI--NSTVRLYEWTTEKELRTECNHYN-NIMALYLKTK 935 (1158)
T ss_dssp CCEEEEEEEEET-TEEEEEEE-EEESSCEEEEEEE-TTEEEEEE--TTEEEEEEECTTSCEEEEEEECC-CSCEEEEEEE
T ss_pred CceEEEEEEEEC-CEEEEEEE-EEcCCcCEEEeee-CCEEEEEc--CCEEEEEECCCCceEEEEeeccc-cEEEEEEecc
Confidence 458899999841 12222222 2346778887644 45444444 3689999997654333 111111 1222233234
Q ss_pred CCEEEEecCCCcee--------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCcee
Q psy7433 109 EEFFVTGAGDGDIK--------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSS 168 (213)
Q Consensus 109 ~~~l~~~~~~~~i~--------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~ 168 (213)
++++++|..-..+. ..++++.+-.+ ..++.+..+|.+.++...... .....++.....
T Consensus 936 ~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~-~t~l~aD~~gNl~vl~~~~~~-~~~~~~~~L~~~ 1013 (1158)
T 3ei3_A 936 GDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDD-DNFLGAENAFNLFVCQKDSAA-TTDEERQHLQEV 1013 (1158)
T ss_dssp TTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEET-TEEEEEETTSEEEEEEECTTC-CSTTGGGBEEEE
T ss_pred CCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEcc-CcEEEEcCCCcEEEEecCCCC-CCccccceeeeE
Confidence 66777776555443 56667776544 367788899999998764311 000000000011
Q ss_pred EEEecCCCeEEEEe---CCC----------CeEEEEecCCcEEEE
Q psy7433 169 FFKHIGQGVTQLHV---DGG----------SRLFSCGADGSMKVR 200 (213)
Q Consensus 169 ~~~~~~~~v~~~~~---~~~----------~~l~s~~~d~~i~iw 200 (213)
..-+.+..|+++.- .+. ..++-++.+|.|-+.
T Consensus 1014 ~~fhlG~~vt~~~~~sl~~~~~~~~~~~~~~~il~~T~~GsIg~l 1058 (1158)
T 3ei3_A 1014 GLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLV 1058 (1158)
T ss_dssp EEEECSSCEEEEEECCSCCC-------CEEEEEEEEETTSCEEEE
T ss_pred EEEeCCCcEeeEEeeeeecCCCccccccccceEEEEecCCEEEEE
Confidence 12223456776652 222 137778889988765
No 331
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=93.93 E-value=1.4 Score=32.59 Aligned_cols=71 Identities=17% Similarity=0.263 Sum_probs=40.0
Q ss_pred eEEEEEcc-------CCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcE
Q psy7433 125 VKCLAIDP-------HEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSM 197 (213)
Q Consensus 125 v~~~~~~~-------~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i 197 (213)
+..+.|.+ ++.++++.-..+.|...++..++....... +......+..+++.|++.|+.++.+..=
T Consensus 273 p~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~-------~~~~~~rp~~v~~~pdG~lyv~td~~~g 345 (353)
T 2g8s_A 273 VSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRI-------LTDRGQRIRDVRTGPDGYLYVLTDESSG 345 (353)
T ss_dssp EEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEE-------SGGGCCCEEEEEECTTSCEEEEECSTTE
T ss_pred cceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEc-------ccCCCCceeEEEECCCCcEEEEEeCCCC
Confidence 45566653 456666666677777777765433221110 0011247899999998876655443333
Q ss_pred EEEeC
Q psy7433 198 KVRQL 202 (213)
Q Consensus 198 ~iw~~ 202 (213)
+||.+
T Consensus 346 ~I~ri 350 (353)
T 2g8s_A 346 ELLKV 350 (353)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 45544
No 332
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=93.66 E-value=1.5 Score=32.12 Aligned_cols=56 Identities=9% Similarity=0.092 Sum_probs=27.7
Q ss_pred CCCeEEEeeccC-------CCccEEEEeCCCcccccceeeee-eecCCceEEEEecCCCEEEEEcCC
Q psy7433 18 SCSLVATAGHSS-------ESKNVCLWDSLLPQKKALVQAFV-CHDQGASSLVFAPQHQLLISAGKK 76 (213)
Q Consensus 18 ~~~~l~~~g~~s-------~~~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d 76 (213)
++++++.||... .-..+.+||..+. ....+.... .......++ ..++++++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~-~W~~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~ 128 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN-SWVKLMSHAPMGMAGHVTF--VHNGKAYVTGGVN 128 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTT-EEEECSCCCSSCCSSEEEE--EETTEEEEEECCC
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCC-cEEECCCCCCcccccceEE--EECCEEEEEeCcC
Confidence 567777776300 0246888887532 222222222 111111222 2567777888754
No 333
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=93.35 E-value=1.6 Score=31.45 Aligned_cols=99 Identities=10% Similarity=-0.004 Sum_probs=45.6
Q ss_pred eCCCCeEEEeeccC-CC-------ccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC-------CcEE
Q psy7433 16 LGSCSLVATAGHSS-ES-------KNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK-------GDIC 80 (213)
Q Consensus 16 ~~~~~~l~~~g~~s-~~-------~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~v~ 80 (213)
..++.+++.||... .+ ..+.+||..+. +...+..+.........+.+ ++.+++.|+.+ ..+.
T Consensus 54 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~ 130 (318)
T 2woz_A 54 TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSS-EWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVL 130 (318)
T ss_dssp CSSSCEEEEESSCC-------CCCBEEEEEETTTT-EEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEE
T ss_pred EECCEEEEECCcccCccccCCCccccEEEEeCCCC-cEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEE
Confidence 45677888886310 11 12777887432 22222222222222222222 56677777653 3478
Q ss_pred EEeccCceEEEecccCCCCeeEEEecCCCCEEEEecC
Q psy7433 81 VIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAG 117 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 117 (213)
+||..+.+-...-..........+...+++.++.|+.
T Consensus 131 ~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 167 (318)
T 2woz_A 131 CYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGK 167 (318)
T ss_dssp EEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCE
T ss_pred EEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCC
Confidence 8888876543321111111111112245667777764
No 334
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=93.27 E-value=2.2 Score=32.92 Aligned_cols=108 Identities=13% Similarity=0.071 Sum_probs=60.0
Q ss_pred CceEEEEEeCCCC--eEEEeeccCCCccEEEEeCCCcccccceeeee---------eecCCceEEEEecC----CCEEEE
Q psy7433 8 KITSDFVFLGSCS--LVATAGHSSESKNVCLWDSLLPQKKALVQAFV---------CHDQGASSLVFAPQ----HQLLIS 72 (213)
Q Consensus 8 ~~v~~~~~~~~~~--~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~---------~~~~~v~~~~~~~~----~~~l~~ 72 (213)
...+.|+|.|+|. +|++- ..|.|++++.+.......+..+. ........++|+|+ +.+.++
T Consensus 14 ~~P~~~a~~pdG~~rl~V~e----r~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~ 89 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILE----KEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVS 89 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEE----TTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEE
T ss_pred CCceEEEECCCCCeEEEEEe----CCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEE
Confidence 4567899999985 77766 78999999752111111111111 11356788999995 333332
Q ss_pred EcC--C----------CcEEEEeccC----------ceEEEecc--cCCCCeeEEEecCCCCEEEEecCCC
Q psy7433 73 AGK--K----------GDICVIDLRQ----------RVIRSRFN--AHESPVKCLAIDPHEEFFVTGAGDG 119 (213)
Q Consensus 73 ~~~--d----------~~v~iwd~~~----------~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~~~ 119 (213)
-+. + ..|.-|.+.. .+.+..+. ........|+|.||+.++++.+..+
T Consensus 90 yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 90 YTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp EEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred EeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 221 1 1344455432 12333322 1223457899999998777766544
No 335
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=92.69 E-value=1.2 Score=32.91 Aligned_cols=96 Identities=19% Similarity=0.228 Sum_probs=57.5
Q ss_pred CEEEEEcCCCcEEEEeccCceEEEecccC-CCCeeE------------EEec--CCCCEEEEecCCCcee--------ec
Q psy7433 68 QLLISAGKKGDICVIDLRQRVIRSRFNAH-ESPVKC------------LAID--PHEEFFVTGAGDGDIK--------SP 124 (213)
Q Consensus 68 ~~l~~~~~d~~v~iwd~~~~~~~~~~~~~-~~~i~~------------~~~~--~~~~~l~~~~~~~~i~--------~~ 124 (213)
.+++.++.||.|.-+|..+|+.+-+++.. ..++.. +... .+|+..+....+|..+ ..
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 46888889999999999999888777643 122211 1111 1333333333333222 00
Q ss_pred eEEEEEc-------c----CCceEEEecCCCcEEEEEccCCeeeeeecCC
Q psy7433 125 VKCLAID-------P----HEEFFVTGAGDGDIKVWSLSGNHLLYNFPGE 163 (213)
Q Consensus 125 v~~~~~~-------~----~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~ 163 (213)
...+... + .+..+++|+.+|.+...|+++|+.+..+...
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 0001111 0 3557889999999999999999988887653
No 336
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=92.15 E-value=5.5 Score=34.69 Aligned_cols=128 Identities=9% Similarity=0.129 Sum_probs=70.4
Q ss_pred CCEEEEEc----------CCCcEEEEeccCceEEEec-ccCCCCeeEEEecCCCCEEEEecCCCcee-------------
Q psy7433 67 HQLLISAG----------KKGDICVIDLRQRVIRSRF-NAHESPVKCLAIDPHEEFFVTGAGDGDIK------------- 122 (213)
Q Consensus 67 ~~~l~~~~----------~d~~v~iwd~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------- 122 (213)
..+++.|. ..|.|.+|++..++..... ....+++++++-- +|+.++..+..=.++
T Consensus 844 ~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g~Lla~ig~~l~vy~l~~~~~L~~~~~ 922 (1158)
T 3ei3_A 844 NTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF-NGKLLASINSTVRLYEWTTEKELRTECN 922 (1158)
T ss_dssp CCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEEE-TTEEEEEETTEEEEEEECTTSCEEEEEE
T ss_pred CEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEEEeee-CCEEEEEcCCEEEEEECCCCceEEEEee
Confidence 46787775 3578999999754332221 1245677777644 344333332211111
Q ss_pred --eceEEEEEccCCceEEEecCCCcEEEEEcc--CCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEE
Q psy7433 123 --SPVKCLAIDPHEEFFVTGAGDGDIKVWSLS--GNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMK 198 (213)
Q Consensus 123 --~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~ 198 (213)
..+..+.....+.++++|..-..+.++..+ ..+.. .+..... ...++++.+-.++.++.+..+|.+.
T Consensus 923 ~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~-~~a~D~~--------~~~vta~~~ld~~t~l~aD~~gNl~ 993 (1158)
T 3ei3_A 923 HYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFE-EIARDFN--------PNWMSAVEILDDDNFLGAENAFNLF 993 (1158)
T ss_dssp ECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEE-EEEECCS--------CBCEEEEEEEETTEEEEEETTSEEE
T ss_pred ccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEE-EEEeecc--------cccEEEEEEEccCcEEEEcCCCcEE
Confidence 001122222345677777666666655443 22222 2211111 2578888887677888899999999
Q ss_pred EEeCCC
Q psy7433 199 VRQLPD 204 (213)
Q Consensus 199 iw~~~~ 204 (213)
+.....
T Consensus 994 vl~~~~ 999 (1158)
T 3ei3_A 994 VCQKDS 999 (1158)
T ss_dssp EEEECT
T ss_pred EEecCC
Confidence 988765
No 337
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=91.96 E-value=2.6 Score=30.45 Aligned_cols=126 Identities=5% Similarity=-0.070 Sum_probs=65.8
Q ss_pred EEEeCCCCeEEEeec-cCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcC-CCcEEEEeccCceEE
Q psy7433 13 FVFLGSCSLVATAGH-SSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGK-KGDICVIDLRQRVIR 90 (213)
Q Consensus 13 ~~~~~~~~~l~~~g~-~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~v~iwd~~~~~~~ 90 (213)
..|+++++.|+-... ...+..|...+++ +...+.+..+. + .+|+++++.|+-.+. ...|...++..+...
T Consensus 109 ~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~d----Gs~~~~lt~~~--~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~ 180 (302)
T 3s25_A 109 IYASLIGNYIYYLHYDTQTATSLYRIRID----GEEKKKIKNHY--L--FTCNTSDRYFYYNNPKNGQLYRYDTASQSEA 180 (302)
T ss_dssp EEEEEETTEEEEEEESSSSCEEEEEEETT----SCCCEEEESSC--C--CCSEEETTEEEEECTTTCCEEEEETTTTEEE
T ss_pred cEEEEeCCEEEEEeecCCCCceEEEEECC----CCCeEEEeCCC--c--eEeeEECCEEEEEeCCCceEEEEECCCCCEE
Confidence 367788888887610 0123444444542 22233333232 2 456788888876654 577888888766544
Q ss_pred EecccCCCCeeEEEecCCCCEEEEecCCC--cee--------------eceEEEEEccCCceEEEecC--CCcEEEEEcc
Q psy7433 91 SRFNAHESPVKCLAIDPHEEFFVTGAGDG--DIK--------------SPVKCLAIDPHEEFFVTGAG--DGDIKVWSLS 152 (213)
Q Consensus 91 ~~~~~~~~~i~~~~~~~~~~~l~~~~~~~--~i~--------------~~v~~~~~~~~~~~l~~~~~--dg~i~v~d~~ 152 (213)
..+.+ ... ..+.|++..|+-..... .|. ..+ ..|+|++++|..++. .+.|..-++.
T Consensus 181 ~l~~~---~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~D 254 (302)
T 3s25_A 181 LFYDC---NCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLTEANI--EHYNVYGSLIFYQRGGDNPALCVVKND 254 (302)
T ss_dssp EEECS---CEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCCEECSCSCE--EEEEEETTEEEEEECSSSCEEEEEETT
T ss_pred EEeCC---Ccc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEEeCCCc--ceEEECCCEEEEEECCCCcEEEEEECC
Confidence 33332 222 23457666655433221 221 222 347888887765532 3455555553
No 338
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=91.29 E-value=2.1 Score=36.40 Aligned_cols=40 Identities=18% Similarity=0.096 Sum_probs=33.7
Q ss_pred eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecC
Q psy7433 123 SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPG 162 (213)
Q Consensus 123 ~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~ 162 (213)
..+.+++..++..++++-+.|+++++|++.+++++.+...
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL 275 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 275 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecc
Confidence 3567777788888999999999999999999998877543
No 339
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=90.26 E-value=4.3 Score=29.98 Aligned_cols=65 Identities=8% Similarity=0.062 Sum_probs=45.8
Q ss_pred ccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCccc
Q psy7433 131 DPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 131 ~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
+|..+.+|.-. ...+.+||+++...+...... ..|.--.|-.+..|+-.+ +..|+-|++.....+
T Consensus 75 nP~~~ViALra-g~~LQiFnletK~klks~~~~-----------e~VvfWkWis~~~L~lVT-~taVyHWs~~~~s~P 139 (365)
T 2xzh_A 75 NPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-----------DDVTFWKWISLNTVALVT-DNAVYHWSMEGESQP 139 (365)
T ss_dssp CSSSSEEEEEE-TTEEEEEETTTTEEEEEEECS-----------SCEEEEEECSSSEEEEEE-SSEEEEEESSTTCCC
T ss_pred CCCccEEEEec-CCeEEEechHHhhhhcceecC-----------CccEEEEecCCCeEEEEc-CCcEEEEcccCCCCC
Confidence 34444444433 568999999999998888775 468888887776766554 457999999764443
No 340
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=89.15 E-value=5.1 Score=29.24 Aligned_cols=98 Identities=14% Similarity=0.121 Sum_probs=51.4
Q ss_pred CCCeEEEeeccCCCccEEEEeCCC-cccccceeeee-eecCCceEEEEecCCCEEEEEcC-C---------CcEEEEecc
Q psy7433 18 SCSLVATAGHSSESKNVCLWDSLL-PQKKALVQAFV-CHDQGASSLVFAPQHQLLISAGK-K---------GDICVIDLR 85 (213)
Q Consensus 18 ~~~~l~~~g~~s~~~~i~iwd~~~-~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-d---------~~v~iwd~~ 85 (213)
++.+++.||. ....+.++|... ..+...+..+. .....-.++.+ ++++++.|+. + ..+.+||..
T Consensus 19 ~~~iyv~GG~--~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~ 94 (357)
T 2uvk_A 19 NDTVYIGLGS--AGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPK 94 (357)
T ss_dssp TTEEEEECGG--GTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETT
T ss_pred CCEEEEEeCc--CCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCC
Confidence 6778888874 455789999842 12233333322 11122222222 5667777765 2 468899998
Q ss_pred CceEEEecccC-CCCeeEEEecCCCCEEEEecCCC
Q psy7433 86 QRVIRSRFNAH-ESPVKCLAIDPHEEFFVTGAGDG 119 (213)
Q Consensus 86 ~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~~~ 119 (213)
+.+-...-... .......+...+++.++.|+.++
T Consensus 95 ~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 129 (357)
T 2uvk_A 95 TNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQ 129 (357)
T ss_dssp TTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCH
T ss_pred CCcEEECCCCCCcccccceEEEECCEEEEEeCcCC
Confidence 87543322211 11112212225677888887653
No 341
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=89.15 E-value=6.4 Score=30.37 Aligned_cols=107 Identities=12% Similarity=0.120 Sum_probs=62.3
Q ss_pred ccccccCceEEEEEeCC---CCeEEEeeccCCCccEEEEeCCCcccc--cc---eeeee----eecCCceEEEEecCCCE
Q psy7433 2 TYQCHNKITSDFVFLGS---CSLVATAGHSSESKNVCLWDSLLPQKK--AL---VQAFV----CHDQGASSLVFAPQHQL 69 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~---~~~l~~~g~~s~~~~i~iwd~~~~~~~--~~---~~~~~----~~~~~v~~~~~~~~~~~ 69 (213)
.++||.+....+.+..+ ...++.+......+.++|-++..+..+ .. ...+. ...+-..++..++.-..
T Consensus 193 ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygv 272 (494)
T 1bpo_A 193 PIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDV 272 (494)
T ss_dssp EECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTE
T ss_pred hheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCE
Confidence 46677666655544321 124444421123478999998533111 11 11111 11233457788887778
Q ss_pred EEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCC
Q psy7433 70 LISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPH 108 (213)
Q Consensus 70 l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (213)
++....-|.+.+||++++.++..-+-....|...+....
T Consensus 273 iyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~ 311 (494)
T 1bpo_A 273 VFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEA 311 (494)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETT
T ss_pred EEEEecCceEEEEecccceeeeeecccCCceEEecccCC
Confidence 888889999999999999888766655555554444443
No 342
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=88.69 E-value=7 Score=30.19 Aligned_cols=31 Identities=10% Similarity=0.082 Sum_probs=23.6
Q ss_pred cCCceEEEEecCCC-EEEEEcCCCcEEEEecc
Q psy7433 55 DQGASSLVFAPQHQ-LLISAGKKGDICVIDLR 85 (213)
Q Consensus 55 ~~~v~~~~~~~~~~-~l~~~~~d~~v~iwd~~ 85 (213)
-.....|+|.|++. .|+.+...|.|++++..
T Consensus 13 L~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 13 LRQPVGALHSGDGSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp ESSEEEEECCSSSSCCEEEEETTTEEEEECTT
T ss_pred CCCceEEEECCCCCeEEEEEeCCceEEEEeCC
Confidence 34568999999986 56666678999999753
No 343
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=87.62 E-value=6.3 Score=28.42 Aligned_cols=125 Identities=6% Similarity=0.024 Sum_probs=62.9
Q ss_pred EEeCCCCeEEEeeccCC------------CccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEc--C--CC
Q psy7433 14 VFLGSCSLVATAGHSSE------------SKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG--K--KG 77 (213)
Q Consensus 14 ~~~~~~~~l~~~g~~s~------------~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~--d~ 77 (213)
-+++++.+|+-+.. .. ...|+..++.. . ....+. .. ....|+++++.|+-.. . +.
T Consensus 59 ~i~~~g~~Iyy~~~-~~~~~~~~~~~~~n~~~Iy~i~~dg---~-~~~~l~--~~--~~~~~s~~g~~Iy~~~~~~~~~~ 129 (302)
T 3s25_A 59 YINADKNYVYYVRN-NNQKITSQTFFSYDRNSLCRIKRNG---H-GSTVLD--PD--PCIYASLIGNYIYYLHYDTQTAT 129 (302)
T ss_dssp EEEECSSEEEEEEE-CC------CCSSCCSEEEEEEETTS---C-CCEEEE--CS--CEEEEEEETTEEEEEEESSSSCE
T ss_pred eEEEcCCEEEEEEC-CCCcccccceeccCCCeEEEEeCCC---C-cceEee--cC--CccEEEEeCCEEEEEeecCCCCc
Confidence 46788888887742 11 24566666632 1 122221 11 2337788888888765 2 34
Q ss_pred cEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecC-CCcee-------------eceEEEEEccCCceEEEecCC
Q psy7433 78 DICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAG-DGDIK-------------SPVKCLAIDPHEEFFVTGAGD 143 (213)
Q Consensus 78 ~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-~~~i~-------------~~v~~~~~~~~~~~l~~~~~d 143 (213)
.|...++.... ...+..+.. .+++|+++.|.-.+. ...|. .......++|++.+|+-...+
T Consensus 130 ~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~~~~~~~~P~g~~iy~t~~~ 204 (302)
T 3s25_A 130 SLYRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDCNCYKPVVLDDTNVYYMDVN 204 (302)
T ss_dssp EEEEEETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECSCEEEEEEEETTEEEEEEGG
T ss_pred eEEEEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCCCccceeeecCCEEEEEEcC
Confidence 45555555333 233332222 345666666654443 33332 111223456888877665433
Q ss_pred --CcEEEEEcc
Q psy7433 144 --GDIKVWSLS 152 (213)
Q Consensus 144 --g~i~v~d~~ 152 (213)
..|..-++.
T Consensus 205 ~~~~I~~~~ld 215 (302)
T 3s25_A 205 RDNAIVHVNIN 215 (302)
T ss_dssp GTTEEEEECSS
T ss_pred CCcEEEEEECC
Confidence 345555554
No 344
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=87.56 E-value=1.3 Score=38.30 Aligned_cols=38 Identities=18% Similarity=0.132 Sum_probs=30.7
Q ss_pred ceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeec
Q psy7433 124 PVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFP 161 (213)
Q Consensus 124 ~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~ 161 (213)
.+.+++..++..++++-+.|+++++|++.++.++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34455566677899999999999999999998877754
No 345
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=86.88 E-value=6.8 Score=28.03 Aligned_cols=56 Identities=7% Similarity=0.077 Sum_probs=29.4
Q ss_pred ccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcC-----C------CcEEEEeccCceE
Q psy7433 32 KNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGK-----K------GDICVIDLRQRVI 89 (213)
Q Consensus 32 ~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d------~~v~iwd~~~~~~ 89 (213)
..+.+||..... ... ..+..............++.+++.|+. . ..+..||..+.+-
T Consensus 13 ~~~~~yd~~~~~-W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W 79 (315)
T 4asc_A 13 EGAVAYDPAANE-CYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEW 79 (315)
T ss_dssp TEEEEEETTTTE-EEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEE
T ss_pred CceEEECCCCCe-Eec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeE
Confidence 578999985322 221 222211122223333457777777773 1 1277888887654
No 346
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=86.66 E-value=12 Score=30.58 Aligned_cols=70 Identities=11% Similarity=0.228 Sum_probs=40.3
Q ss_pred CCCeEEEeeccCCC---ccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCC--cEEEEeccCceE
Q psy7433 18 SCSLVATAGHSSES---KNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKG--DICVIDLRQRVI 89 (213)
Q Consensus 18 ~~~~l~~~g~~s~~---~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~v~iwd~~~~~~ 89 (213)
++.+++.||..... ..+.+||..+. +...+..+...... .+++...++.+++.|+.++ .+.+||..+.+-
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~-~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W 525 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTR-EWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEIF 525 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTT-EEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCC-cEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCce
Confidence 77788888752211 46888887532 23333332222121 2333324778888887654 688899887654
No 347
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=80.28 E-value=3.6 Score=34.97 Aligned_cols=37 Identities=16% Similarity=0.201 Sum_probs=31.4
Q ss_pred CceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEec
Q psy7433 57 GASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRF 93 (213)
Q Consensus 57 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~ 93 (213)
.+.+++..++..++++-+.|+.+++|++.+++++...
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 4566777778889999999999999999999887764
No 348
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=78.53 E-value=12 Score=30.00 Aligned_cols=16 Identities=25% Similarity=0.283 Sum_probs=11.6
Q ss_pred eEEEEecCCCEEEEEc
Q psy7433 59 SSLVFAPQHQLLISAG 74 (213)
Q Consensus 59 ~~~~~~~~~~~l~~~~ 74 (213)
--|+|+|.|++++.-.
T Consensus 479 DNL~fd~~G~LwI~eD 494 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTD 494 (592)
T ss_dssp EEEEECTTCCEEEEEC
T ss_pred cceEECCCCCEEEEec
Confidence 4588999998666543
No 349
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=77.45 E-value=20 Score=28.72 Aligned_cols=68 Identities=7% Similarity=0.073 Sum_probs=47.7
Q ss_pred CCeeEEEecCCCCEEEEecC-CCcee-----------------------------eceEEEEEccCCceEEEecCCCcEE
Q psy7433 98 SPVKCLAIDPHEEFFVTGAG-DGDIK-----------------------------SPVKCLAIDPHEEFFVTGAGDGDIK 147 (213)
Q Consensus 98 ~~i~~~~~~~~~~~l~~~~~-~~~i~-----------------------------~~v~~~~~~~~~~~l~~~~~dg~i~ 147 (213)
.....+..+|||+++++++. +.++. -.....+|+++|.-..+---|..|.
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvv 402 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVV 402 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEE
Confidence 34568889999999887765 33332 4567789999996555666899999
Q ss_pred EEEccCC----------eeeeeecCCCC
Q psy7433 148 VWSLSGN----------HLLYNFPGEHA 165 (213)
Q Consensus 148 v~d~~~~----------~~~~~~~~~~~ 165 (213)
-|++... ..+..+..|.+
T Consensus 403 kWni~~a~~~~~g~~~~~v~~k~dv~Yq 430 (638)
T 3sbq_A 403 KWNMEEAVRAYKGEKVNYIKQKLDVHYQ 430 (638)
T ss_dssp EEEHHHHHHHHTTCCCCCEEEEEECSSC
T ss_pred EEeccHHHHHhcCccCCeeeeccccccC
Confidence 9999643 34555666553
No 350
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=77.31 E-value=28 Score=28.40 Aligned_cols=70 Identities=14% Similarity=0.166 Sum_probs=39.6
Q ss_pred CCCCeEEEeeccCCCccEEEEeCCCcccccceee---eeeecCCceEEEEecC-CCEEEEEcC--C-----CcEEEEecc
Q psy7433 17 GSCSLVATAGHSSESKNVCLWDSLLPQKKALVQA---FVCHDQGASSLVFAPQ-HQLLISAGK--K-----GDICVIDLR 85 (213)
Q Consensus 17 ~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~---~~~~~~~v~~~~~~~~-~~~l~~~~~--d-----~~v~iwd~~ 85 (213)
.++.+++.||... ++.+.+||..+. ....+.. .........++.+..+ +++++.|+. + ..+..||+.
T Consensus 499 ~~~~iyv~GG~~~-~~~v~~yd~~t~-~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~ 576 (695)
T 2zwa_A 499 PDGNVLILGGVTE-GPAMLLYNVTEE-IFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYD 576 (695)
T ss_dssp TTSCEEEECCBCS-SCSEEEEETTTT-EEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEEC
T ss_pred cCCEEEEECCCCC-CCCEEEEECCCC-ceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEcc
Confidence 4788888887522 237999998542 2222221 1112222334555555 666777765 2 357788887
Q ss_pred Cce
Q psy7433 86 QRV 88 (213)
Q Consensus 86 ~~~ 88 (213)
+..
T Consensus 577 ~~~ 579 (695)
T 2zwa_A 577 AEN 579 (695)
T ss_dssp TTC
T ss_pred CCc
Confidence 665
No 351
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=77.11 E-value=15 Score=29.26 Aligned_cols=63 Identities=13% Similarity=0.140 Sum_probs=38.5
Q ss_pred CceEEEEEeCCCCeEEEeecc-C--------CCccEEEEeCCCcccccceeeeeee-cCCceEEEEecCCCEEEEE
Q psy7433 8 KITSDFVFLGSCSLVATAGHS-S--------ESKNVCLWDSLLPQKKALVQAFVCH-DQGASSLVFAPQHQLLISA 73 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~-s--------~~~~i~iwd~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~ 73 (213)
.....|.|.++|.+.+..-.+ + ....|..++. ..++....+... ..+++.++|+||++.|++.
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp---~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADP---ATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECT---TTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeC---CCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 457789999999988844100 0 0124555554 234333333322 3568999999999988776
No 352
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=76.67 E-value=5.3 Score=32.72 Aligned_cols=37 Identities=16% Similarity=0.501 Sum_probs=29.8
Q ss_pred ceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecC
Q psy7433 124 PVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPG 162 (213)
Q Consensus 124 ~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~ 162 (213)
.|.++.+. ..++++-+.|+++|+|+++++.++.+...
T Consensus 223 ~Is~~~~~--~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLFH--ERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEET--TTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEeccC--CcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 35555543 67999999999999999999998877665
No 353
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=75.82 E-value=19 Score=25.68 Aligned_cols=90 Identities=11% Similarity=0.120 Sum_probs=41.5
Q ss_pred CeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcC----CC-------cEEEEeccCce
Q psy7433 20 SLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGK----KG-------DICVIDLRQRV 88 (213)
Q Consensus 20 ~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~-------~v~iwd~~~~~ 88 (213)
.+++.+| ..+..||..... ... .................++.+++.|+. ++ .+..||..+.+
T Consensus 17 ~i~~~GG-----~~~~~yd~~~~~-W~~-~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~ 89 (318)
T 2woz_A 17 LILLVND-----TAAVAYDPMENE-CYL-TALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSE 89 (318)
T ss_dssp EEEEECS-----SEEEEEETTTTE-EEE-EEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTE
T ss_pred hhhhccc-----cceEEECCCCCc-eec-ccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCc
Confidence 3455553 348899984322 111 111111111222233456777778873 11 17788887765
Q ss_pred EEEe--cccCCCCeeEEEecCCCCEEEEecCC
Q psy7433 89 IRSR--FNAHESPVKCLAIDPHEEFFVTGAGD 118 (213)
Q Consensus 89 ~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~~ 118 (213)
-... ++........+.+ +++.++.|+.+
T Consensus 90 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 119 (318)
T 2woz_A 90 WVGLPPLPSARCLFGLGEV--DDKIYVVAGKD 119 (318)
T ss_dssp EEECSCBSSCBCSCEEEEE--TTEEEEEEEEB
T ss_pred EEECCCCCccccccceEEE--CCEEEEEcCcc
Confidence 4322 2211111112222 56777777653
No 354
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=75.53 E-value=13 Score=29.68 Aligned_cols=59 Identities=12% Similarity=0.138 Sum_probs=37.3
Q ss_pred ceEEEEEeCCCCeEEEeeccCCC------------ccEEEEeCCCcccccceeeeeee-cCCceEEEEecCCCEEEEE
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSES------------KNVCLWDSLLPQKKALVQAFVCH-DQGASSLVFAPQHQLLISA 73 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~------------~~i~iwd~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~ 73 (213)
..--|+|+|.|++++.. ..+ ..+.+.+. ..++..+.+..+ ..+++.++|+||++.|+..
T Consensus 477 ~PDNL~fd~~G~LwI~e---Dg~~~~~~~~~~~gnn~~~~~~~---~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILT---DGDSSNAGDFAGMGNNQMLCADP---ATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEE---CCCCCCSGGGTTTCSCEEEEECT---TTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEe---cCCCcccccccccccceEEEEeC---CCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 34668999999987766 221 23444443 333333333333 4679999999999887765
No 355
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=75.44 E-value=3.6 Score=35.69 Aligned_cols=38 Identities=16% Similarity=0.204 Sum_probs=30.9
Q ss_pred CceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecc
Q psy7433 57 GASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFN 94 (213)
Q Consensus 57 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~ 94 (213)
.+.+++..++..++++-+.|+.+++|++.+++++....
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34555666778899999999999999999998877643
No 356
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=74.92 E-value=24 Score=28.23 Aligned_cols=16 Identities=25% Similarity=0.287 Sum_probs=10.8
Q ss_pred ceEEEEecCCCEEEEE
Q psy7433 58 ASSLVFAPQHQLLISA 73 (213)
Q Consensus 58 v~~~~~~~~~~~l~~~ 73 (213)
...|.|.++|.+.+..
T Consensus 478 PDnL~fd~~G~LWf~T 493 (592)
T 4a9v_A 478 PDGLGFDKAGRLWILT 493 (592)
T ss_dssp EEEEEECTTCCEEEEE
T ss_pred CCceEECCCCCEEEEe
Confidence 4567888888766643
No 357
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=73.50 E-value=36 Score=27.85 Aligned_cols=180 Identities=9% Similarity=-0.017 Sum_probs=99.5
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee-------eecCCceEEEEecCCCEEEEEcCCCcEE
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV-------CHDQGASSLVFAPQHQLLISAGKKGDIC 80 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 80 (213)
..|.++.-.++|.+-+.+ .+| +..++..... ......+. .....|.++.-.+++++.+ |. ++-+.
T Consensus 324 ~~v~~i~~D~~g~lWiGt----~~G-l~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWi-gt-~~GL~ 395 (758)
T 3ott_A 324 NQFYSLFRDSKGFYWFGG----ANG-LIRFTDPAGE-RHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWI-AT-DGSIN 395 (758)
T ss_dssp CBEEEEEECTTCCEEEEE----TTE-EEEESCTTSS-CCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEE-EE-TTEEE
T ss_pred ceEEEEEEcCCCCEEEee----CCc-ceeecccccc-cceeEEeccCCcCCCCCCCceEEEEECCCCCEEE-Ee-CCcHh
Confidence 458888877788776654 344 5556542110 01111111 0123578887777776554 44 35688
Q ss_pred EEeccCceEEEec--cc----CCCCeeEEEecCCCCEEEEecC-CCcee----------------------------ece
Q psy7433 81 VIDLRQRVIRSRF--NA----HESPVKCLAIDPHEEFFVTGAG-DGDIK----------------------------SPV 125 (213)
Q Consensus 81 iwd~~~~~~~~~~--~~----~~~~i~~~~~~~~~~~l~~~~~-~~~i~----------------------------~~v 125 (213)
.||..+++..... .. ....|.++...+++...+ |+. .|..+ ..|
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i 474 (758)
T 3ott_A 396 RYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWI-STCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFI 474 (758)
T ss_dssp EEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEE-EESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCE
T ss_pred hcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEE-EECCCceEEEccccccccCCcceeccccccccccccccee
Confidence 8998877543221 11 123577787777765443 443 23211 136
Q ss_pred EEEEEccCCceEE-EecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCC
Q psy7433 126 KCLAIDPHEEFFV-TGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 126 ~~~~~~~~~~~l~-~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~ 204 (213)
.++...++|++.+ .++. +-|..+|.++.+.... ...... ....+.++....++.|-.++.+ -+..++..+
T Consensus 475 ~~i~~d~~g~lWi~~~t~-~Gl~~~d~~~~~~~~~-~~~~~~------~~~~~~~i~~d~~g~lWigt~~-Gl~~~~~~~ 545 (758)
T 3ott_A 475 NQIIPDNEGNVWVLLYNN-KGIDKINPRTREVTKL-FADELT------GEKSPNYLLCDEDGLLWVGFHG-GVMRINPKD 545 (758)
T ss_dssp EEEEECTTSCEEEEETTC-SSEEEEETTTTEEEEE-CTTTSC------GGGCEEEEEECTTSCEEEEETT-EEEEECC--
T ss_pred eeEEEcCCCCEEEEccCC-CCcEEEeCCCCceEEe-cCCCcC------CCcccceEEECCCCCEEEEecC-ceEEEecCC
Confidence 7788888888665 3444 4577889876654432 111100 0135778887777776666655 477777654
Q ss_pred C
Q psy7433 205 R 205 (213)
Q Consensus 205 ~ 205 (213)
+
T Consensus 546 ~ 546 (758)
T 3ott_A 546 E 546 (758)
T ss_dssp C
T ss_pred C
Confidence 4
No 358
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=72.87 E-value=22 Score=25.16 Aligned_cols=68 Identities=18% Similarity=0.138 Sum_probs=34.3
Q ss_pred eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeC
Q psy7433 123 SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQL 202 (213)
Q Consensus 123 ~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~ 202 (213)
..|..++--.... ++. .||.+..|-......+. ++... ...|..++......++.. ||.+..|-.
T Consensus 180 ~~v~~i~~G~~hs-~al--~~G~v~~wG~n~~gqlg-~p~~~---------~~~v~~i~~G~~h~~al~--~g~v~~wG~ 244 (282)
T 3qhy_B 180 SGVDDVAGGIFHS-LAL--KDGKVIAWGDNRYKQTT-VPTEA---------LSGVSAIASGEWYSLALK--NGKVIAWGS 244 (282)
T ss_dssp SSEEEEEECSSEE-EEE--ETTEEEEEECCTTSTTC-CCGGG---------GSSCCEEEECSSCEEEEE--TTEEEEEST
T ss_pred CCeEEEEecCCEE-EEE--ECCeEEEEECCCCCCCC-CCccc---------CCCceEEEcCCCEEEEEE--CCEEEEecC
Confidence 3455555443322 333 48888888653221111 00000 135666766544444443 899999876
Q ss_pred CCC
Q psy7433 203 PDR 205 (213)
Q Consensus 203 ~~~ 205 (213)
...
T Consensus 245 n~~ 247 (282)
T 3qhy_B 245 SRT 247 (282)
T ss_dssp TCC
T ss_pred CCC
Confidence 543
No 359
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=72.78 E-value=23 Score=25.15 Aligned_cols=137 Identities=15% Similarity=0.074 Sum_probs=79.9
Q ss_pred cCCceEEEEec--CCCEEEEEcCCCcEEEEeccCce------EEEecccCCCCeeEEEecCCCCEEEEecCCCcee----
Q psy7433 55 DQGASSLVFAP--QHQLLISAGKKGDICVIDLRQRV------IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---- 122 (213)
Q Consensus 55 ~~~v~~~~~~~--~~~~l~~~~~d~~v~iwd~~~~~------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---- 122 (213)
...|..+.. + +...++..+.+|.++-..+..-. ....+. ..+.+..+........++..+.+|.+.
T Consensus 67 ~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lk-egD~l~~~~~~~~~~~ill~T~~G~~~r~~~ 144 (276)
T 3no0_A 67 EEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLT-EGDEVVSIASSVDETHILLFTKKGRVARFSV 144 (276)
T ss_dssp TCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCC-TTCCEEEEEECCSSCEEEEEETTSEEEEEEG
T ss_pred CCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecC-CCCEEEEEEEeCCCCEEEEEECCCEEEEEEh
Confidence 445655543 4 46788899999999998875431 112222 234455555555555677777777654
Q ss_pred ---------------------eceEEEEEccCCceEEEecCCCcEEEEEccCC-------eeeeeecCCCCceeEEEecC
Q psy7433 123 ---------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGN-------HLLYNFPGEHARSSFFKHIG 174 (213)
Q Consensus 123 ---------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~-------~~~~~~~~~~~~~~~~~~~~ 174 (213)
..|..+..-+++..++..+..|.++...+... +-+..+. . +
T Consensus 145 ~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i~-~----------~ 213 (276)
T 3no0_A 145 REVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVSG-T----------K 213 (276)
T ss_dssp GGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECCC-S----------S
T ss_pred hhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEEc-C----------C
Confidence 33444444445567888888888888876422 1122221 1 1
Q ss_pred CCeEEEEe-CCCCeEEEEecCCcEEE--EeCCC
Q psy7433 175 QGVTQLHV-DGGSRLFSCGADGSMKV--RQLPD 204 (213)
Q Consensus 175 ~~v~~~~~-~~~~~l~s~~~d~~i~i--w~~~~ 204 (213)
+.+..+.. .++..++..+.+|.+.. ++..+
T Consensus 214 ~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 214 DTLVDLIPIKEEVELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp SCEEEEEEESSEEEEEEEETTSCEEEEEEEGGG
T ss_pred CcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHHH
Confidence 34444433 34446777788888777 76543
No 360
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=70.46 E-value=34 Score=30.99 Aligned_cols=103 Identities=14% Similarity=0.158 Sum_probs=56.4
Q ss_pred CccccccCceEEEEEeC---CCCeEEEeeccCCCccEEEEeCCCcccc--cc----eee-ee--eecCCceEEEEecCCC
Q psy7433 1 MTYQCHNKITSDFVFLG---SCSLVATAGHSSESKNVCLWDSLLPQKK--AL----VQA-FV--CHDQGASSLVFAPQHQ 68 (213)
Q Consensus 1 ~~l~~h~~~v~~~~~~~---~~~~l~~~g~~s~~~~i~iwd~~~~~~~--~~----~~~-~~--~~~~~v~~~~~~~~~~ 68 (213)
|.++||-+....+.... ....++.+......+.++|-++..+..+ .. +.. ++ ....-..++..++.-.
T Consensus 192 Q~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g 271 (1630)
T 1xi4_A 192 QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD 271 (1630)
T ss_pred hhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccC
Confidence 34667776665555432 2234444321123478888888432011 11 111 11 0122344667777666
Q ss_pred EEEEEcCCCcEEEEeccCceEEEecccCCCCeeEE
Q psy7433 69 LLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCL 103 (213)
Q Consensus 69 ~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~ 103 (213)
.++..+.-|.+.++|+.++..+..-+-...+|...
T Consensus 272 ~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~ 306 (1630)
T 1xi4_A 272 VVFLITKYGYIHLYDLETGTCIYMNRISGETIFVT 306 (1630)
T ss_pred EEEEEecCceEEEEecccchhhhhccccCCceEEe
Confidence 78888889999999999998765544334444333
No 361
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=66.24 E-value=34 Score=24.70 Aligned_cols=173 Identities=9% Similarity=0.079 Sum_probs=94.0
Q ss_pred eCCCCeEEEeeccCCCccEEEEeCCCccccc----cee--eeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccC---
Q psy7433 16 LGSCSLVATAGHSSESKNVCLWDSLLPQKKA----LVQ--AFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQ--- 86 (213)
Q Consensus 16 ~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~----~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~--- 86 (213)
-|+..++++. +.+|.|+--.+..-.... -+. .+. ....+..+........++..+..|.++-+....
T Consensus 5 i~~e~~~v~~---T~~G~iKr~~~~~~~~~~~~~~g~~~~~lk-e~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~ 80 (312)
T 1suu_A 5 MQKENIVVML---TKKGFLKRLSQNEYKLQGTGGKGLSSFDLN-DGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKD 80 (312)
T ss_dssp ---CEEEEEE---ETTCBEEEEEGGGSCBCCSSCCCEECCCCC-TTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC
T ss_pred cCCCCEEEEE---eCCCEEEEeEHHHhhccccCCCCceecccC-CCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCC
Confidence 3566677777 689999988763211110 111 112 123344444444555677777888877766532
Q ss_pred c------eE---EEecccCCCCeeEEEecC---CCCEEEEecCCCcee-----------------------eceEEEEEc
Q psy7433 87 R------VI---RSRFNAHESPVKCLAIDP---HEEFFVTGAGDGDIK-----------------------SPVKCLAID 131 (213)
Q Consensus 87 ~------~~---~~~~~~~~~~i~~~~~~~---~~~~l~~~~~~~~i~-----------------------~~v~~~~~~ 131 (213)
. .+ ...+. ....+..+...+ +...++..+.+|.++ ..+..+...
T Consensus 81 ~~r~~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~ 159 (312)
T 1suu_A 81 SSRASKGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIV 159 (312)
T ss_dssp -------CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEE
T ss_pred CCccCCCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEe
Confidence 1 11 00122 223444443332 456788888888776 334444443
Q ss_pred cCCceEEEecCCCcEEEEEccCC---------eeeeeecCCCCceeEEEecCCCeEEEEeC-CCCeEEEEecCCcEEEEe
Q psy7433 132 PHEEFFVTGAGDGDIKVWSLSGN---------HLLYNFPGEHARSSFFKHIGQGVTQLHVD-GGSRLFSCGADGSMKVRQ 201 (213)
Q Consensus 132 ~~~~~l~~~~~dg~i~v~d~~~~---------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~s~~~d~~i~iw~ 201 (213)
.....++..+.+|.+..++...- .....+.. +..|..+..- ++..+++.+..|..+..+
T Consensus 160 ~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-----------~d~vv~~~~v~~~~~l~~vt~~G~~kr~~ 228 (312)
T 1suu_A 160 FKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-----------GDLFVKVLSVKENPYLLIVSENGYGKRLN 228 (312)
T ss_dssp CTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCT-----------TCCEEEEEECTTCSEEEEEETTSEEEEEE
T ss_pred CCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCC-----------CCEEEEEEEECCCCeEEEEECCCceEEEE
Confidence 34456777888888888877431 11122221 2455565543 455688888899888887
Q ss_pred CCC
Q psy7433 202 LPD 204 (213)
Q Consensus 202 ~~~ 204 (213)
+..
T Consensus 229 ~~e 231 (312)
T 1suu_A 229 MSK 231 (312)
T ss_dssp GGG
T ss_pred HHH
Confidence 754
No 362
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=64.20 E-value=11 Score=30.92 Aligned_cols=30 Identities=13% Similarity=0.248 Sum_probs=25.7
Q ss_pred CCCEEEEEcCCCcEEEEeccCceEEEeccc
Q psy7433 66 QHQLLISAGKKGDICVIDLRQRVIRSRFNA 95 (213)
Q Consensus 66 ~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~ 95 (213)
+..++++-+.|..+++|++++++++....-
T Consensus 230 ~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 230 HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 567999999999999999999988776543
No 363
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=60.65 E-value=46 Score=24.28 Aligned_cols=110 Identities=12% Similarity=0.106 Sum_probs=63.8
Q ss_pred CceEEEE-EeC--CCCeEEEeeccCCCccEEEEeCCCccc----ccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEE
Q psy7433 8 KITSDFV-FLG--SCSLVATAGHSSESKNVCLWDSLLPQK----KALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDIC 80 (213)
Q Consensus 8 ~~v~~~~-~~~--~~~~l~~~g~~s~~~~i~iwd~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 80 (213)
..|.++. +.+ +..++++. +.+|.++.-.+..-.. +.....+.. ...+..+........|+..+..|.+.
T Consensus 95 e~i~~~~~~~~~~~e~~~v~~---T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~ 170 (327)
T 3uc1_A 95 ERIAQVIQIRGYTDAPYLVLA---TRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSI 170 (327)
T ss_dssp CCEEEEEEESSTTSSSEEEEE---ETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEE
T ss_pred CEEEEEEEeccCCCCCEEEEE---cCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEE
Confidence 4455553 332 46677777 6899999988732111 111112222 34455555544556677777888888
Q ss_pred EEecc--C---------ceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee
Q psy7433 81 VIDLR--Q---------RVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122 (213)
Q Consensus 81 iwd~~--~---------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~ 122 (213)
.+... . |.....+. ....|.++...+++..++..+..|.++
T Consensus 171 rf~~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~K 222 (327)
T 3uc1_A 171 RFSATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAK 222 (327)
T ss_dssp EEECCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEE
T ss_pred EEECcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEE
Confidence 77765 2 11111222 244566666666667888888888776
No 364
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=60.07 E-value=33 Score=25.22 Aligned_cols=29 Identities=10% Similarity=0.399 Sum_probs=25.1
Q ss_pred ceEEEecCCCcEEEEEccCCeeeeeecCC
Q psy7433 135 EFFVTGAGDGDIKVWSLSGNHLLYNFPGE 163 (213)
Q Consensus 135 ~~l~~~~~dg~i~v~d~~~~~~~~~~~~~ 163 (213)
.+++.++.||.|+-+|..+|+.+-++...
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~ 39 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPE 39 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGG
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCC
Confidence 47889999999999999999998887654
No 365
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=59.82 E-value=46 Score=24.02 Aligned_cols=86 Identities=15% Similarity=0.125 Sum_probs=53.8
Q ss_pred CCCEEEEEcCCCcEEEEeccCc-------eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------
Q psy7433 66 QHQLLISAGKKGDICVIDLRQR-------VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------- 122 (213)
Q Consensus 66 ~~~~l~~~~~d~~v~iwd~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------- 122 (213)
+..+|+..+..|.++...+... .....+.. .+.+..+........++..+.+|...
T Consensus 113 ~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~G 191 (312)
T 1suu_A 113 DDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQG 191 (312)
T ss_dssp TTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCC
T ss_pred CCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCC
Confidence 4567888889999998887432 22223333 44555555544455677777777654
Q ss_pred ---------eceEEEEEccCCceEEEecCCCcEEEEEcc
Q psy7433 123 ---------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLS 152 (213)
Q Consensus 123 ---------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~ 152 (213)
..+..+..-+++..+++.+..|..+..++.
T Consensus 192 v~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 192 VCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp EECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGG
T ss_pred eEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHH
Confidence 344555444445567788888888888774
No 366
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=59.41 E-value=44 Score=23.63 Aligned_cols=169 Identities=14% Similarity=0.051 Sum_probs=78.6
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCc-
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR- 87 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~- 87 (213)
.|..++.... ..+.- . |+.|..|-.+.. .+. ..-......|..++...+. .++. . ||.|..|-....
T Consensus 25 ~i~~ia~G~~--h~~~l---~-~G~v~~wG~n~~--Gql-g~p~~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~G 92 (282)
T 3qhy_B 25 GVDAIAGGYF--HGLAL---K-GGKVLGWGANLN--GQL-TMPAATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDG 92 (282)
T ss_dssp SCCEEEECSS--EEEEE---E-TTEEEEEECCSS--STT-SCCGGGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTS
T ss_pred CCcEEEeCCC--eEEEE---E-CCEEEEEeCCCC--CCC-CCCccCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCC
Confidence 4666665432 33333 3 899999986421 111 1000112356666654333 2333 3 788888875432
Q ss_pred eEEEecccCCCCeeEEEecC-------CCCEEEEecCC-Ccee------eceEEEEEccCCceEEEecCCCcEEEEEccC
Q psy7433 88 VIRSRFNAHESPVKCLAIDP-------HEEFFVTGAGD-GDIK------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSG 153 (213)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~-------~~~~l~~~~~~-~~i~------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~ 153 (213)
+.-.... ....|..++... +++.+.-+..+ +++- ..|..++--.....++ . ||.+..|-...
T Consensus 93 qlg~P~~-~~~~v~~ia~G~~hs~al~~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~l--~-~G~v~~wG~n~ 168 (282)
T 3qhy_B 93 QTTVPAE-ARSGVDAIAAGAWASYALKDGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALAV--K-NGGVIAWGDNY 168 (282)
T ss_dssp TTCCCGG-GSSSEEEEEEETTEEEEEETTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEEE--E-TTEEEEEECCT
T ss_pred CCCCCcc-cCCCeEEEECcCCEEEEEeCCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEEEE--E-CCEEEEecCCC
Confidence 1100000 112344333322 44444333322 1111 4455554443322222 3 68888886543
Q ss_pred CeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCC
Q psy7433 154 NHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 205 (213)
...+. .+... ...|..++......++. .||.+..|-....
T Consensus 169 ~gqlg---~p~~~-------~~~v~~i~~G~~hs~al--~~G~v~~wG~n~~ 208 (282)
T 3qhy_B 169 FGQTT---VPAEA-------QSGVDDVAGGIFHSLAL--KDGKVIAWGDNRY 208 (282)
T ss_dssp TSTTS---CCGGG-------GSSEEEEEECSSEEEEE--ETTEEEEEECCTT
T ss_pred CCCCC---Cceec-------CCCeEEEEecCCEEEEE--ECCeEEEEECCCC
Confidence 22111 00000 14677777765444554 5999999976543
No 367
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=57.89 E-value=52 Score=23.96 Aligned_cols=130 Identities=7% Similarity=0.056 Sum_probs=70.4
Q ss_pred CCEEEEEcCCCcEEEEeccCc--------eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------
Q psy7433 67 HQLLISAGKKGDICVIDLRQR--------VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------- 122 (213)
Q Consensus 67 ~~~l~~~~~d~~v~iwd~~~~--------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------- 122 (213)
+.+++..+.+|.++-..+..- .....+... +.+..+........++..+.+|.+.
T Consensus 106 ~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~a~G 184 (323)
T 1wp5_A 106 NGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKND-DQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAG 184 (323)
T ss_dssp SCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTT-CCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCC
T ss_pred CceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCC-CEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHCcccCCCCcC
Confidence 567888899999999887432 111122322 4454444444455666667777653
Q ss_pred ---------eceEEEEEccCCc-eEEEecCCCcEEEEEccCC-------eeeeeecCCCCceeEEEecCCCeE-EEEeCC
Q psy7433 123 ---------SPVKCLAIDPHEE-FFVTGAGDGDIKVWSLSGN-------HLLYNFPGEHARSSFFKHIGQGVT-QLHVDG 184 (213)
Q Consensus 123 ---------~~v~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~-------~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~ 184 (213)
..|.++..-+++. .+++.+..|..+..++... +-+..+.... ..+..+. ...+.+
T Consensus 185 V~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e~~~~~Rg~kGv~~~~~~~-------~~~~~l~~~~~v~~ 257 (323)
T 1wp5_A 185 VKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAKRGVVILRELK-------ANPHRISGFVVAQD 257 (323)
T ss_dssp EECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCCEECSCCCS-------SSCCCEEEEEEECT
T ss_pred EEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHHccccCCCCCCEECeeecC-------CCCceEEEEEEeCC
Confidence 3445554333344 6777777887777766431 1111111000 0012344 334455
Q ss_pred CCeEEEEecCCcEEEEeCCC
Q psy7433 185 GSRLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 185 ~~~l~s~~~d~~i~iw~~~~ 204 (213)
+..++..+.+|.+.-..+..
T Consensus 258 ~~~i~~it~~g~~ir~~~~~ 277 (323)
T 1wp5_A 258 SDTIYLQTEKSFIETIKVGD 277 (323)
T ss_dssp TCEEEEEETTSCEEEEEGGG
T ss_pred CCeEEEEeCCCeEEEEEhhh
Confidence 55677777888776666543
No 368
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=56.23 E-value=53 Score=23.62 Aligned_cols=96 Identities=10% Similarity=0.110 Sum_probs=54.5
Q ss_pred CCceEEEEe---cCCCEEEEEcCCCcEEEEeccCc-------eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee---
Q psy7433 56 QGASSLVFA---PQHQLLISAGKKGDICVIDLRQR-------VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--- 122 (213)
Q Consensus 56 ~~v~~~~~~---~~~~~l~~~~~d~~v~iwd~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--- 122 (213)
..|.++... .+..+++..+.+|.++--.+..- .....+... +.+..+........++..+.+|.+.
T Consensus 95 e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~i~l~T~~G~~irf~ 173 (307)
T 1zi0_A 95 ERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDEVMLFSAEGKVVRFK 173 (307)
T ss_dssp CCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCEEEEEETTSEEEEEE
T ss_pred CEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCEEEEECCCCcEEEEE
Confidence 345555432 24567888889999998877421 111222323 4444444444444566666666543
Q ss_pred ----------------------eceEEEEEccCCceEEEecCCCcEEEEEcc
Q psy7433 123 ----------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLS 152 (213)
Q Consensus 123 ----------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~ 152 (213)
..|..+..-+++..+++.+..|.++-.++.
T Consensus 174 ~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~ 225 (307)
T 1zi0_A 174 ESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVA 225 (307)
T ss_dssp GGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECGG
T ss_pred HHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEEEEcCCceEEEEHH
Confidence 344444443444567777778877777663
No 369
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=52.08 E-value=66 Score=23.41 Aligned_cols=181 Identities=10% Similarity=0.047 Sum_probs=88.8
Q ss_pred CCCCeEEEeeccCCCccEEEEeCCCccc-ccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEecc---C------
Q psy7433 17 GSCSLVATAGHSSESKNVCLWDSLLPQK-KALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLR---Q------ 86 (213)
Q Consensus 17 ~~~~~l~~~g~~s~~~~i~iwd~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~---~------ 86 (213)
|+...+++. +.+|.|+--.+..-.. ......++. ...+..+........|+..+..|.++-+... .
T Consensus 3 ~~e~~~v~l---T~~G~IKr~~~~~~~~~~~~~~~lke-~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~ 78 (323)
T 1wp5_A 3 ASEDVIVTV---TKDGYVKRTSLRSYAASNGQDFAMKD-TDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDL 78 (323)
T ss_dssp SCCEEEEEE---ETTCEEEEEEHHHHHHTTTCCCCCCT-TCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSC
T ss_pred cCCcEEEEE---eCCCEEEEeEHHHhhhcCccccccCC-CCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCC
Confidence 566677777 6899998876521101 011111222 2334444444455566666677886665542 1
Q ss_pred ceEEEec-cc-CCCCeeEE-EecC--CCCEEEEecCCCcee------------------------eceEEEEEccCCceE
Q psy7433 87 RVIRSRF-NA-HESPVKCL-AIDP--HEEFFVTGAGDGDIK------------------------SPVKCLAIDPHEEFF 137 (213)
Q Consensus 87 ~~~~~~~-~~-~~~~i~~~-~~~~--~~~~l~~~~~~~~i~------------------------~~v~~~~~~~~~~~l 137 (213)
|.++..+ +- ....|..+ ...+ ++.+++..+.+|.++ ..+..+........+
T Consensus 79 G~~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~~~~~~i 158 (323)
T 1wp5_A 79 GQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNEL 158 (323)
T ss_dssp CEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEE
T ss_pred CcChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEeCCCCEE
Confidence 2222111 11 23345544 3332 256788889999886 122222222233456
Q ss_pred EEecCCCcEEEEEccCCeeeeeecCCCCceeEE-EecCCCeEEEEe-CCCC-eEEEEecCCcEEEEeCCC
Q psy7433 138 VTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFF-KHIGQGVTQLHV-DGGS-RLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 138 ~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~-~~~~-~l~s~~~d~~i~iw~~~~ 204 (213)
+..+.+|.+..++...-..... .......+ -..+..|.++.. .++. .++..+..|..+..++..
T Consensus 159 ~l~T~~G~~irf~~~ev~~~gR---~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 159 FLVTHNGYALWFDESEVSIVGV---RAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp EEEETTSEEEEEEGGGSCBCCS---SCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred EEEeCCCcEEEEEHHHCcccCC---CCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence 6667777777776642111000 00000000 011244655544 3444 677888888877766643
No 370
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=50.51 E-value=61 Score=22.62 Aligned_cols=62 Identities=16% Similarity=0.200 Sum_probs=38.6
Q ss_pred cCCceEEEecCCCcEEEEEccC-------CeeeeeecCCCCceeEEEecCCCeEEEEeC--CCCeEEEEecCCcEEEEeC
Q psy7433 132 PHEEFFVTGAGDGDIKVWSLSG-------NHLLYNFPGEHARSSFFKHIGQGVTQLHVD--GGSRLFSCGADGSMKVRQL 202 (213)
Q Consensus 132 ~~~~~l~~~~~dg~i~v~d~~~-------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~l~s~~~d~~i~iw~~ 202 (213)
.++.+++.++.+|.++...+.. +.....+... ..+..+... ++..++..+.+|.+..+..
T Consensus 93 ~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~-----------d~lv~~~~~~~~~~~i~l~T~~G~~lrf~~ 161 (256)
T 1zvt_A 93 SDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPEN-----------AHVMPPVVIEDASDMLLAITQAGRMLMFPV 161 (256)
T ss_dssp CTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTT-----------CCBCCCEECCCTTCEEEEEETTSEEEEEEG
T ss_pred CCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECCC-----------CEEEEEEEecCCCCEEEEEcCCCeEEEEEH
Confidence 3456788889999999888743 2223333221 233333333 3556888888998888877
Q ss_pred CC
Q psy7433 203 PD 204 (213)
Q Consensus 203 ~~ 204 (213)
..
T Consensus 162 ~e 163 (256)
T 1zvt_A 162 SD 163 (256)
T ss_dssp GG
T ss_pred HH
Confidence 54
No 371
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=45.95 E-value=93 Score=23.36 Aligned_cols=142 Identities=13% Similarity=0.157 Sum_probs=83.4
Q ss_pred ceEEEEEeCCCCeEEE-eecc-----------CCCccEEEEeCCCcccc--cceeeeeee------cCCceEEEEe---c
Q psy7433 9 ITSDFVFLGSCSLVAT-AGHS-----------SESKNVCLWDSLLPQKK--ALVQAFVCH------DQGASSLVFA---P 65 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~-~g~~-----------s~~~~i~iwd~~~~~~~--~~~~~~~~~------~~~v~~~~~~---~ 65 (213)
.|..+...+.+++=+. .|.. -....|.+||+ .+. +.++.+.-. ...+..+++. |
T Consensus 88 sV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL---~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~ 164 (381)
T 3q6k_A 88 SIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDL---KQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANP 164 (381)
T ss_dssp CEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEES---SSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCT
T ss_pred EeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEEC---CCCCceeEEEEECCHHhcccCCccceEEEecccC
Confidence 5777777776664332 1110 01236889999 444 566655432 3457788887 2
Q ss_pred C----CCEEEEEc-CCCcEEEEeccCceEEEecc----cC--------------CCCeeEEEecCC----CCEEEEecCC
Q psy7433 66 Q----HQLLISAG-KKGDICVIDLRQRVIRSRFN----AH--------------ESPVKCLAIDPH----EEFFVTGAGD 118 (213)
Q Consensus 66 ~----~~~l~~~~-~d~~v~iwd~~~~~~~~~~~----~~--------------~~~i~~~~~~~~----~~~l~~~~~~ 118 (213)
. +.+++... ....|.++|+.+++..+... .. ...+..++++|+ ++.|.-....
T Consensus 165 ~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~pls 244 (381)
T 3q6k_A 165 KGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGS 244 (381)
T ss_dssp TTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESS
T ss_pred CCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECC
Confidence 2 23444333 45779999999876544331 00 236778899987 6666555444
Q ss_pred Cc-ee-------------------------eceEEEEEc-cCCceEEEecCCCcEEEEEccC
Q psy7433 119 GD-IK-------------------------SPVKCLAID-PHEEFFVTGAGDGDIKVWSLSG 153 (213)
Q Consensus 119 ~~-i~-------------------------~~v~~~~~~-~~~~~l~~~~~dg~i~v~d~~~ 153 (213)
+. +. ..-..++++ .+|.++++--..+.|..|+..+
T Consensus 245 s~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 245 AIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp CSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred CCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 42 21 122345665 5677777777778899998865
No 372
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=42.05 E-value=47 Score=27.10 Aligned_cols=26 Identities=8% Similarity=0.331 Sum_probs=20.2
Q ss_pred eceEEEEEccCCceEEEecCCCcEEE
Q psy7433 123 SPVKCLAIDPHEEFFVTGAGDGDIKV 148 (213)
Q Consensus 123 ~~v~~~~~~~~~~~l~~~~~dg~i~v 148 (213)
.+|..|.++++.+.|.+++.++.++|
T Consensus 470 ~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 470 TTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp CCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred ceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 45677889998888888888876554
No 373
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=40.98 E-value=93 Score=21.96 Aligned_cols=111 Identities=12% Similarity=0.085 Sum_probs=63.1
Q ss_pred cCceEEEEEeC-CCCeEEEeeccCCCccEEEEeCCCcc---cccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEE
Q psy7433 7 NKITSDFVFLG-SCSLVATAGHSSESKNVCLWDSLLPQ---KKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVI 82 (213)
Q Consensus 7 ~~~v~~~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iw 82 (213)
...|.++.... +..+++.. +.+|.++...+.+-. .+.....++ ....+..+....+...++..+..|.+..+
T Consensus 67 ~e~i~~v~~~~~~~~~~v~~---T~~G~iKr~~l~~~~~~~~G~~~i~lk-egD~l~~~~~~~~~~~ill~T~~G~~~r~ 142 (276)
T 3no0_A 67 EEKIVGAFIREKFGNRLLLA---TKKGYVKKIPLAEFEYKAQGMPIIKLT-EGDEVVSIASSVDETHILLFTKKGRVARF 142 (276)
T ss_dssp TCCEEEEEEGGGSCSEEEEE---ETTSEEEEEEGGGTTTCSTTEECSCCC-TTCCEEEEEECCSSCEEEEEETTSEEEEE
T ss_pred CCEEEEEECCcCCCCEEEEE---eCCCEEEEEEHHHhhhhcCCeEEEecC-CCCEEEEEEEeCCCCEEEEEECCCEEEEE
Confidence 34555553321 45677777 689999999873211 011111122 23445555555455677778888998888
Q ss_pred eccC---------ceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee
Q psy7433 83 DLRQ---------RVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122 (213)
Q Consensus 83 d~~~---------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~ 122 (213)
.... |.....+. ....+..+...+++..++..+..|..+
T Consensus 143 ~~~eip~~gR~a~Gv~~i~L~-~~d~vv~~~~~~~~~~ll~~T~~G~~k 190 (276)
T 3no0_A 143 SVREVPPSTPGARGVQGIKLE-KNDETSGLRIWNGEPYLLVITAKGRVK 190 (276)
T ss_dssp EGGGSCBCCTTCCCEECCCCC-TTCCEEEEEEESSCSEEEEEETTSCEE
T ss_pred EhhhCCCcCCCCCCEEEEccC-CCCEEEEEEEeCCCCEEEEEeCCCcEE
Confidence 7643 11212222 234566655555566888888888775
No 374
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=40.20 E-value=1.1e+02 Score=22.73 Aligned_cols=179 Identities=12% Similarity=0.102 Sum_probs=0.0
Q ss_pred EEEeCCCCeEEEeeccCCCccEEEEeCCCccccc-----ceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccC-
Q psy7433 13 FVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKA-----LVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQ- 86 (213)
Q Consensus 13 ~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~- 86 (213)
+.+-|+..++++. +.+|.|+--.+..-...+ ....-......+..+........|+..+..|.++-+....
T Consensus 1 ~dlI~~e~~~v~l---T~~GyIKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~ei 77 (370)
T 3l6v_A 1 MDLIAPEDVVVTL---SHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQL 77 (370)
T ss_dssp CCCCCCCCEEEEE---ESSCEEEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGS
T ss_pred CCcccCCCEEEEE---eCCCEEEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHC
Q ss_pred --------ceEEEe---cccCCCCeeEEEecC--CCCEEEEecCCCcee-----------------------eceEEEEE
Q psy7433 87 --------RVIRSR---FNAHESPVKCLAIDP--HEEFFVTGAGDGDIK-----------------------SPVKCLAI 130 (213)
Q Consensus 87 --------~~~~~~---~~~~~~~i~~~~~~~--~~~~l~~~~~~~~i~-----------------------~~v~~~~~ 130 (213)
|.++.. +.....-+..+.... +..+++.++.+|.++ ..+..+..
T Consensus 78 p~~~r~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~ 157 (370)
T 3l6v_A 78 PEAGSNARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVAL 157 (370)
T ss_dssp CBCCTTSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEE
T ss_pred cCCCcccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCEEEEEEE
Q ss_pred ccCCceEEEecCCCcEEEEEcc---------CCeeeeeecCCCCceeEEEecCCCeEEEEeC------------------
Q psy7433 131 DPHEEFFVTGAGDGDIKVWSLS---------GNHLLYNFPGEHARSSFFKHIGQGVTQLHVD------------------ 183 (213)
Q Consensus 131 ~~~~~~l~~~~~dg~i~v~d~~---------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~------------------ 183 (213)
......++..+.+|.+..++.. .|-....+.... .-+......
T Consensus 158 ~~~~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d----------~Vv~~~~~~~~~~~~~~~~~~~~~~~~ 227 (370)
T 3l6v_A 158 TDGDRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGE----------EVVSLIVSERAGGVEDEVEDESAEEVV 227 (370)
T ss_dssp ECSCCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTC----------CEEEEEEECCC----------------
T ss_pred eCCCceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCC----------EEEEEEEeccccccccccccccccccc
Q ss_pred -----------------CCCeEEEEecCCcEEEEeCCC
Q psy7433 184 -----------------GGSRLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 184 -----------------~~~~l~s~~~d~~i~iw~~~~ 204 (213)
++..+++.+..|..+...+..
T Consensus 228 ~t~~g~~~~~~~~~~~~~~~~il~vTe~G~gKrt~~~e 265 (370)
T 3l6v_A 228 ETTDGAEPAVIDVADNGDVAYILTATENGYGKRTPLAE 265 (370)
T ss_dssp -------------------CEEEEEETTSEEEEEEGGG
T ss_pred cccccccccccccccccCCceEEEeeCCCCEEEEEHHH
No 375
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=38.89 E-value=1.7e+02 Score=24.35 Aligned_cols=63 Identities=17% Similarity=0.229 Sum_probs=33.7
Q ss_pred cCceEEEEEeCCC-CeEEEeeccCCCccEEEEeCCCcccccceeeeee----ecCCceEEEEecC-CCEEEEE
Q psy7433 7 NKITSDFVFLGSC-SLVATAGHSSESKNVCLWDSLLPQKKALVQAFVC----HDQGASSLVFAPQ-HQLLISA 73 (213)
Q Consensus 7 ~~~v~~~~~~~~~-~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~----~~~~v~~~~~~~~-~~~l~~~ 73 (213)
.+.|.+|+++|.. ..+..+ ...+.|...+= ...+.+.+..... ....+.+++++|. .+.++.+
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~---~~~ggv~rS~D-gG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~ 82 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYAR---TDIGGAYRWDA-GTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLA 82 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEE---ESSSCEEEEET-TTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEE
T ss_pred CCcEEEEEECCCCCCEEEEE---ecCCCEEEecC-CCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEE
Confidence 4689999999953 344444 25566655541 1222332221111 1246899999984 3445444
No 376
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=37.78 E-value=1.1e+02 Score=21.94 Aligned_cols=179 Identities=11% Similarity=0.086 Sum_probs=87.8
Q ss_pred CCCCeEEEeeccCCCccEEEEeCCCcccc------cceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEecc---C-
Q psy7433 17 GSCSLVATAGHSSESKNVCLWDSLLPQKK------ALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLR---Q- 86 (213)
Q Consensus 17 ~~~~~l~~~g~~s~~~~i~iwd~~~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~---~- 86 (213)
|+...+++. +.+|.|+--.+..-... .....++. ...+..+........|+..+..|.++-+... .
T Consensus 1 ~~e~~~v~~---T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke-~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~ 76 (307)
T 1zi0_A 1 TQEDVVVTL---SHQGYVKYQPLSEYEAQRRGGKGKSAARIKE-EDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEA 76 (307)
T ss_dssp CCCEEEEEE---ETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCC
T ss_pred CCCcEEEEE---eCCCEEEEeeHHHhhhhccCCCCceeeeeCC-CCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCC
Confidence 345566777 68999987776321110 00111222 2334444444445566666677886665542 2
Q ss_pred -----ceEEE---ecccCCCCeeEEEec---CCCCEEEEecCCCcee-----------------------eceEEEEEcc
Q psy7433 87 -----RVIRS---RFNAHESPVKCLAID---PHEEFFVTGAGDGDIK-----------------------SPVKCLAIDP 132 (213)
Q Consensus 87 -----~~~~~---~~~~~~~~i~~~~~~---~~~~~l~~~~~~~~i~-----------------------~~v~~~~~~~ 132 (213)
|.++. .+. ....|..+..- +++..++..+.+|.++ ..+..+....
T Consensus 77 ~~~a~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~d~lv~~~~~~ 155 (307)
T 1zi0_A 77 TRGARGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTS 155 (307)
T ss_dssp CSSSCCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTTCCEEEEEEEC
T ss_pred CCCCCCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCCCEEEEEEEeC
Confidence 22221 122 23445555432 3456788889999886 2222333333
Q ss_pred CCceEEEecCCCcEEEEEccCCeeeeeecCCCCcee-EEEecCCCeEEEEeCC-CCeEEEEecCCcEEEEeCC
Q psy7433 133 HEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSS-FFKHIGQGVTQLHVDG-GSRLFSCGADGSMKVRQLP 203 (213)
Q Consensus 133 ~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~-~~~l~s~~~d~~i~iw~~~ 203 (213)
....++..+.+|.+..++...-.... ....... ..-..+..|.++...+ +..+++.+..|..+-.++.
T Consensus 156 ~~~~i~l~T~~G~~irf~~~~v~~~g---r~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~ 225 (307)
T 1zi0_A 156 GEDEVMLFSAEGKVVRFKESSVRAMG---CNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVA 225 (307)
T ss_dssp TTCEEEEEETTSEEEEEEGGGSCBCC---TTCCCEECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECGG
T ss_pred CCCEEEEECCCCcEEEEEHHHcCccC---CCCCCeEeEEeCCCCEEEEEEEecCCCEEEEEEcCCceEEEEHH
Confidence 33456666777777777664211110 0000000 0001124566665443 4468888888888877664
No 377
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=36.11 E-value=72 Score=24.90 Aligned_cols=25 Identities=8% Similarity=0.320 Sum_probs=15.7
Q ss_pred eceEEEEEccCCceEEEecCCCcEE
Q psy7433 123 SPVKCLAIDPHEEFFVTGAGDGDIK 147 (213)
Q Consensus 123 ~~v~~~~~~~~~~~l~~~~~dg~i~ 147 (213)
.+|..|.++++..+|.+++.++.++
T Consensus 462 ~pI~~m~l~~~~~~Lyv~s~~~V~~ 486 (495)
T 1q47_A 462 TTISAMELSTKQQQLYIGSTAGVAQ 486 (495)
T ss_dssp CCCCEEEEETTTTEEEEEBSSCEEE
T ss_pred CccceEEEcCCCCEEEEEECCeEEE
Confidence 3556666677666777766665444
No 378
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=30.54 E-value=83 Score=18.31 Aligned_cols=16 Identities=13% Similarity=0.289 Sum_probs=10.5
Q ss_pred EEEecCCCCEEEEecC
Q psy7433 102 CLAIDPHEEFFVTGAG 117 (213)
Q Consensus 102 ~~~~~~~~~~l~~~~~ 117 (213)
.+.+..+|+.++....
T Consensus 54 ~L~l~~dGnLvL~d~~ 69 (105)
T 4h3o_A 54 SAVLQSDGNFVVYDSS 69 (105)
T ss_dssp EEEECTTSCEEEECTT
T ss_pred EEEEeCCccEEEECCC
Confidence 4777788877665443
No 379
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=27.29 E-value=1.6e+02 Score=23.25 Aligned_cols=70 Identities=9% Similarity=-0.012 Sum_probs=39.1
Q ss_pred ceEEEEEeCCCC--eEEEeeccCCCccEEEEeCCCcccc-cceeeeee--ecCCce-EEEEecCCCEEEEEcCCCcEEE
Q psy7433 9 ITSDFVFLGSCS--LVATAGHSSESKNVCLWDSLLPQKK-ALVQAFVC--HDQGAS-SLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 9 ~v~~~~~~~~~~--~l~~~g~~s~~~~i~iwd~~~~~~~-~~~~~~~~--~~~~v~-~~~~~~~~~~l~~~~~d~~v~i 81 (213)
.+++|+....+. .+..| ..+|.|.-..+...... ..+..++- ...+|. .+.+++++..|+.++.++.+++
T Consensus 401 ~lT~vav~~~~~~tV~flG---T~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVG---TKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEE---ETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEE---cCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 466666655332 33344 57887765544211111 12233322 245674 8999999899999887765544
No 380
>3mwp_A Nucleoprotein; structural genomics, scottish structural PROT facility, SSPF, nuclear protein; 1.79A {Lassa virus josiah} PDB: 3mwt_A 3mx2_A* 3mx5_A* 3r3l_A 3t5q_A 3t5n_A
Probab=26.02 E-value=21 Score=27.21 Aligned_cols=20 Identities=20% Similarity=0.459 Sum_probs=13.6
Q ss_pred EEecCCcEEEEeCCCCcccc
Q psy7433 190 SCGADGSMKVRQLPDRDAVV 209 (213)
Q Consensus 190 s~~~d~~i~iw~~~~~~~~~ 209 (213)
.+..+|.|++||+.+...+.
T Consensus 162 ~~~~~GVVrvWDVkd~slLn 181 (577)
T 3mwp_A 162 RAGRDGVVRVWDVKNAELLN 181 (577)
T ss_dssp ----CCEECSEECSCGGGGT
T ss_pred CCCCCCeEEEEecCCHHHHh
Confidence 56779999999999886653
No 381
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=25.92 E-value=1.2e+02 Score=24.76 Aligned_cols=38 Identities=18% Similarity=0.499 Sum_probs=27.3
Q ss_pred EEEEecCCCcee---------------------eceEEEEEccCC--ceEEEecCCCcEEE
Q psy7433 111 FFVTGAGDGDIK---------------------SPVKCLAIDPHE--EFFVTGAGDGDIKV 148 (213)
Q Consensus 111 ~l~~~~~~~~i~---------------------~~v~~~~~~~~~--~~l~~~~~dg~i~v 148 (213)
.+..|..+|.+. .+|..|.++++. .+|.+++..+.++|
T Consensus 417 V~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 417 VMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 566677777664 567788888887 78888877765543
No 382
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=22.77 E-value=2.9e+02 Score=21.89 Aligned_cols=66 Identities=12% Similarity=0.099 Sum_probs=35.3
Q ss_pred CceEEEEecCC--CEEEEEcCCCcEEEEeccCc----eEEEecc--cCCCCee-EEEecCCCCEEEEecCCCcee
Q psy7433 57 GASSLVFAPQH--QLLISAGKKGDICVIDLRQR----VIRSRFN--AHESPVK-CLAIDPHEEFFVTGAGDGDIK 122 (213)
Q Consensus 57 ~v~~~~~~~~~--~~l~~~~~d~~v~iwd~~~~----~~~~~~~--~~~~~i~-~~~~~~~~~~l~~~~~~~~i~ 122 (213)
..++++....+ ..++.|..+|.|.-..+... .....+. ....+|. .|.++++...|.+++.++.++
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~k 475 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTR 475 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEeccccce
Confidence 35555554422 35667788887765544322 1222221 1234563 677777666666666655444
No 383
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=21.16 E-value=2.4e+02 Score=20.46 Aligned_cols=139 Identities=9% Similarity=0.100 Sum_probs=73.2
Q ss_pred CCceEEEEec---CCCEEEEEcCCCcEEEEeccCce-------EEEecccCCCCeeEEEecCCCCEEEEecCCCcee---
Q psy7433 56 QGASSLVFAP---QHQLLISAGKKGDICVIDLRQRV-------IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--- 122 (213)
Q Consensus 56 ~~v~~~~~~~---~~~~l~~~~~d~~v~iwd~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--- 122 (213)
..|..+..-+ +..+++..+.+|.++--.+.... ....+.. .+.+..+........++..+..|.+.
T Consensus 95 e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~ 173 (327)
T 3uc1_A 95 ERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFS 173 (327)
T ss_dssp CCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEE
T ss_pred CEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEE
Confidence 4455544333 46789999999999988875421 1112222 33344443333334455555554432
Q ss_pred ------------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCe-------eeeeecCCCCceeEEE
Q psy7433 123 ------------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNH-------LLYNFPGEHARSSFFK 171 (213)
Q Consensus 123 ------------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~-------~~~~~~~~~~~~~~~~ 171 (213)
..|.++..-+++.+++..+..|.++.-.+.... -+..+.....
T Consensus 174 ~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~------ 247 (327)
T 3uc1_A 174 ATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRR------ 247 (327)
T ss_dssp CCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTT------
T ss_pred CcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCC------
Confidence 334555544555678888888888877764221 1111211100
Q ss_pred ecCCCeEEEEe-CCCCeEEEEecCCcEEEEeCC
Q psy7433 172 HIGQGVTQLHV-DGGSRLFSCGADGSMKVRQLP 203 (213)
Q Consensus 172 ~~~~~v~~~~~-~~~~~l~s~~~d~~i~iw~~~ 203 (213)
.+.+..+.. .++..++..+.+|.+.-++..
T Consensus 248 --~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 248 --RGRLVGALIVDDDSELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp --TCSEEEEEEECTTCEEEEEEGGGCEEEEEGG
T ss_pred --CCeEEEEEEeCCCccEEEEcCCCeEEEEehh
Confidence 123444333 344556667777776666554
Done!