Your job contains 1 sequence.
>psy7433
MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASS
LVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGD
IKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQL
HVDGGSRLFSCGADGSMKVRQLPDRDAVVHTLY
The BLAST search returned 8 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy7433
(213 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0023458 - symbol:Rbcn-3A "Rabconnectin-3A" species... 368 4.4e-50 2
MGI|MGI:2443926 - symbol:Dmxl1 "Dmx-like 1" species:10090... 405 6.6e-36 1
UNIPROTKB|Q8TDJ6 - symbol:DMXL2 "DmX-like protein 2" spec... 394 9.8e-35 1
MGI|MGI:2444630 - symbol:Dmxl2 "Dmx-like 2" species:10090... 380 3.0e-33 1
RGD|1586163 - symbol:Dmxl2 "Dmx-like 2" species:10116 "Ra... 374 1.3e-32 1
DICTYBASE|DDB_G0283535 - symbol:DDB_G0283535 "DmX-like pr... 279 1.5e-22 1
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 119 3.5e-08 2
MGI|MGI:1918511 - symbol:Poc1b "POC1 centriolar protein h... 114 2.4e-07 2
UNIPROTKB|H3BPD8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 88 2.8e-06 2
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 109 2.9e-06 2
UNIPROTKB|Q6ZMW3 - symbol:EML6 "Echinoderm microtubule-as... 104 5.2e-06 2
UNIPROTKB|F1PX92 - symbol:EML6 "Uncharacterized protein" ... 103 6.0e-06 2
UNIPROTKB|J9P7H8 - symbol:EML6 "Uncharacterized protein" ... 103 6.3e-06 2
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 85 6.9e-06 2
TAIR|locus:2202129 - symbol:AT1G11160 "AT1G11160" species... 131 8.6e-06 1
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 92 8.7e-06 2
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 92 1.1e-05 2
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 105 1.8e-05 2
RGD|708344 - symbol:Gnb3 "guanine nucleotide binding prot... 113 2.0e-05 2
POMBASE|SPAC57A10.05c - symbol:pof1 "F-box/WD repeat prot... 125 2.3e-05 1
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 91 2.9e-05 2
RGD|1305142 - symbol:Tbl3 "transducin (beta)-like 3" spec... 92 3.1e-05 2
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 115 3.2e-05 2
UNIPROTKB|E1BB14 - symbol:GNB3 "Uncharacterized protein" ... 110 4.8e-05 2
TAIR|locus:2154438 - symbol:AT5G23430 "AT5G23430" species... 123 6.3e-05 1
UNIPROTKB|E1C9D6 - symbol:GNB3 "Uncharacterized protein" ... 109 6.6e-05 2
TAIR|locus:2150788 - symbol:AT5G08390 "AT5G08390" species... 122 8.3e-05 1
UNIPROTKB|E3W9A3 - symbol:KATNB1 "Katanin p80 WD40 repeat... 88 0.00015 2
UNIPROTKB|F1P0F4 - symbol:KATNB1 "Katanin p80 WD40 repeat... 88 0.00015 2
UNIPROTKB|F6UQ08 - symbol:F6UQ08 "Uncharacterized protein... 85 0.00015 2
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 102 0.00016 2
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 99 0.00020 2
WB|WBGene00017435 - symbol:F13H8.2 species:6239 "Caenorha... 88 0.00020 2
UNIPROTKB|E2QTQ5 - symbol:KATNB1 "Uncharacterized protein... 85 0.00020 2
UNIPROTKB|Q9BVA0 - symbol:KATNB1 "Katanin p80 WD40 repeat... 85 0.00020 2
RGD|1311256 - symbol:Katnb1 "katanin p80 (WD repeat conta... 85 0.00020 2
FB|FBgn0030365 - symbol:Tango4 "Transport and Golgi organ... 116 0.00020 1
MGI|MGI:1921437 - symbol:Katnb1 "katanin p80 (WD40-contai... 85 0.00020 2
UNIPROTKB|A6QQU1 - symbol:KATNB1 "KATNB1 protein" species... 85 0.00020 2
UNIPROTKB|B3KVK2 - symbol:GNB1 "cDNA FLJ16663 fis, clone ... 100 0.00023 2
UNIPROTKB|Q5ZIU8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 88 0.00023 2
DICTYBASE|DDB_G0295793 - symbol:DDB_G0295793 "WD40 repeat... 117 0.00024 1
MGI|MGI:95785 - symbol:Gnb3 "guanine nucleotide binding p... 113 0.00026 1
UNIPROTKB|E1BQV9 - symbol:KATNB1 "Katanin p80 WD40 repeat... 85 0.00032 2
UNIPROTKB|F1NC11 - symbol:WDR3 "Uncharacterized protein" ... 91 0.00037 2
POMBASE|SPAC18B11.10 - symbol:tup11 "transcriptional core... 115 0.00038 1
ASPGD|ASPL0000058626 - symbol:AN1208 species:162425 "Emer... 113 0.00041 1
TAIR|locus:2059856 - symbol:MSI2 "AT2G16780" species:3702... 110 0.00047 2
MGI|MGI:2442895 - symbol:Eml6 "echinoderm microtubule ass... 87 0.00050 2
UNIPROTKB|B3KPU1 - symbol:GNB2 "Guanine nucleotide-bindin... 97 0.00055 2
UNIPROTKB|F1P8Q5 - symbol:GNB3 "Guanine nucleotide-bindin... 110 0.00058 1
UNIPROTKB|P79147 - symbol:GNB3 "Guanine nucleotide-bindin... 110 0.00058 1
UNIPROTKB|F1SLU8 - symbol:GNB3 "Uncharacterized protein" ... 110 0.00058 1
ZFIN|ZDB-GENE-040426-2855 - symbol:gnb1b "guanine nucleot... 101 0.00064 2
UNIPROTKB|F1MNS4 - symbol:TBL3 "Transducin beta-like prot... 88 0.00073 2
UNIPROTKB|Q2KJJ5 - symbol:TBL3 "Transducin beta-like prot... 88 0.00073 2
UNIPROTKB|P16520 - symbol:GNB3 "Guanine nucleotide-bindin... 109 0.00078 1
UNIPROTKB|P62871 - symbol:GNB1 "Guanine nucleotide-bindin... 100 0.00084 2
UNIPROTKB|P62872 - symbol:GNB1 "Guanine nucleotide-bindin... 100 0.00084 2
UNIPROTKB|P62873 - symbol:GNB1 "Guanine nucleotide-bindin... 100 0.00084 2
MGI|MGI:95781 - symbol:Gnb1 "guanine nucleotide binding p... 100 0.00084 2
RGD|2718 - symbol:Gnb1 "guanine nucleotide binding protei... 100 0.00084 2
ZFIN|ZDB-GENE-030131-823 - symbol:gnb1a "guanine nucleoti... 100 0.00084 2
WB|WBGene00001510 - symbol:fzr-1 species:6239 "Caenorhabd... 95 0.00087 2
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 108 0.00093 1
UNIPROTKB|Q8IU52 - symbol:TUWD12 "POC1 centriolar protein... 104 0.00096 2
>FB|FBgn0023458 [details] [associations]
symbol:Rbcn-3A "Rabconnectin-3A" species:7227 "Drosophila
melanogaster" [GO:0007424 "open tracheal system development"
evidence=IMP] [GO:0008593 "regulation of Notch signaling pathway"
evidence=IMP] [GO:0007035 "vacuolar acidification" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005773 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0007035
GO:GO:0008593 eggNOG:NOG314136 InterPro:IPR022033 Pfam:PF12234
EMBL:X97196 PIR:T13853 ProteinModelPortal:Q24593 SMR:Q24593
STRING:Q24593 PaxDb:Q24593 PRIDE:Q24593 FlyBase:FBgn0023458
InParanoid:Q24593 OrthoDB:EOG40ZPCB ArrayExpress:Q24593 Bgee:Q24593
Uniprot:Q24593
Length = 3429
Score = 368 (134.6 bits), Expect = 4.4e-50, Sum P(2) = 4.4e-50
Identities = 64/93 (68%), Positives = 80/93 (86%)
Query: 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASS 60
++YQCHNK SDFVFLGSCSL+A+AG SSE+KN+ +WD+LLP KK+ V AF CHDQG+S
Sbjct: 3239 ISYQCHNKALSDFVFLGSCSLLASAGQSSENKNINIWDTLLPHKKSCVSAFTCHDQGSSC 3298
Query: 61 LVFAPQHQLLISAGKKGDICVIDLRQRVIRSRF 93
LVFAPQHQ+LIS GK+GD+CV D+RQR +R R+
Sbjct: 3299 LVFAPQHQVLISCGKRGDVCVFDVRQRTLRHRY 3331
Score = 207 (77.9 bits), Expect = 4.4e-50, Sum P(2) = 4.4e-50
Identities = 35/68 (51%), Positives = 52/68 (76%)
Query: 146 IKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDR 205
+++W ++ L+ FP EHA++ FFKH GQGV+Q++VD RLFSCG+DG MKVR L ++
Sbjct: 3362 LRIWDMNQFMLINTFPHEHAKNGFFKHTGQGVSQVYVDAFGRLFSCGSDGCMKVRLLVEK 3421
Query: 206 DAVVHTLY 213
D +VH++Y
Sbjct: 3422 DNIVHSVY 3429
Score = 80 (33.2 bits), Expect = 7.8e-20, Sum P(2) = 7.8e-20
Identities = 23/93 (24%), Positives = 39/93 (41%)
Query: 36 LWDS-LLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGD---ICVIDL---RQRV 88
LW + + Q ++ CH++ S VF LL SAG+ + I + D ++
Sbjct: 3225 LWQAGIASQNNRSFISYQCHNKALSDFVFLGSCSLLASAGQSSENKNINIWDTLLPHKKS 3284
Query: 89 IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121
S F H+ CL P + ++ GD+
Sbjct: 3285 CVSAFTCHDQGSSCLVFAPQHQVLISCGKRGDV 3317
Score = 51 (23.0 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVW 149
VK ++ P ++TG DG +++W
Sbjct: 3158 VKRMSAHPLMPLYLTGGQDGSVQIW 3182
Score = 41 (19.5 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
Identities = 9/42 (21%), Positives = 18/42 (42%)
Query: 108 HEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVW 149
H++ + G +C + +F + G GDG + +W
Sbjct: 3186 HQQPVCSPRTSGTFAKVTRCRFSEQGNKFGI-GDGDGKLSLW 3226
Score = 39 (18.8 bits), Expect = 1.9e-16, Sum P(3) = 1.9e-16
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWS 150
++CL + +F G G +I VW+
Sbjct: 1899 LRCLPLQQRAQFQRQGVGTSNI-VWA 1923
Score = 37 (18.1 bits), Expect = 3.0e-16, Sum P(3) = 3.0e-16
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 100 VKCLAIDPHEEFFVTGAGDGDIK 122
VK ++ P ++TG DG ++
Sbjct: 3158 VKRMSAHPLMPLYLTGGQDGSVQ 3180
Score = 36 (17.7 bits), Expect = 3.8e-16, Sum P(3) = 3.8e-16
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 108 HEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAGDG 144
+ E + T G G K +K A P + GAG G
Sbjct: 2722 NNETWSTLFGGGMKKLLIKPAAAPPPTQMVTGGAGAG 2758
Score = 35 (17.4 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 67 HQLLISAGKKGDIC 80
HQ+L A GD C
Sbjct: 4 HQILSGACNAGDRC 17
Score = 35 (17.4 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 71 ISAGKKGDICVIDLRQRVIRSRFNAH 96
I+A + IC+ + + S+ N H
Sbjct: 72 IAAAYENKICIFEPTPVIESSKHNTH 97
>MGI|MGI:2443926 [details] [associations]
symbol:Dmxl1 "Dmx-like 1" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2443926 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 EMBL:AY590892 EMBL:BC056490 EMBL:AK050888
EMBL:AK166520 IPI:IPI01007630 RefSeq:NP_001074840.2
UniGene:Mm.257790 ProteinModelPortal:Q6PNC0 SMR:Q6PNC0
STRING:Q6PNC0 PhosphoSite:Q6PNC0 PaxDb:Q6PNC0 PRIDE:Q6PNC0
GeneID:240283 KEGG:mmu:240283 UCSC:uc008ewn.1 CTD:1657
eggNOG:NOG314136 HOGENOM:HOG000018348 HOVERGEN:HBG079593
InParanoid:Q6PNC0 OrthoDB:EOG44J2H3 Bgee:Q6PNC0 CleanEx:MM_DMXL1
Genevestigator:Q6PNC0 GermOnline:ENSMUSG00000037416
InterPro:IPR022033 Pfam:PF12234 Uniprot:Q6PNC0
Length = 3013
Score = 405 (147.6 bits), Expect = 6.6e-36, P = 6.6e-36
Identities = 71/122 (58%), Positives = 95/122 (77%)
Query: 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASS 60
+ +QCHNK +DFVF+ S SL+ATAG SS+++N+CLWD+L+ +LV AF CHD GA+
Sbjct: 2818 LAWQCHNKTANDFVFVSSSSLIATAGLSSDNRNICLWDTLVAPANSLVHAFTCHDSGATV 2877
Query: 61 LVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGD 120
L +AP+HQLLIS G+KG C+ DLRQR R F +H+SPVK +AIDP EE+FVTG+ +G+
Sbjct: 2878 LAYAPKHQLLISGGRKGFTCIFDLRQRQQRQLFQSHDSPVKAIAIDPTEEYFVTGSAEGN 2937
Query: 121 IK 122
IK
Sbjct: 2938 IK 2939
Score = 262 (97.3 bits), Expect = 2.0e-22, Sum P(3) = 2.0e-22
Identities = 48/83 (57%), Positives = 63/83 (75%)
Query: 123 SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHV 182
SPVK +AIDP EE+FVTG+ +G+IK+WSLS LL+ F EHAR S F++IG GV Q+
Sbjct: 2915 SPVKAIAIDPTEEYFVTGSAEGNIKIWSLSSFSLLHTFINEHARQSIFRNIGTGVMQIET 2974
Query: 183 DGGSRLFSCGADGSMKVRQLPDR 205
+ +FSCGADG+MK+R LPD+
Sbjct: 2975 GPANHIFSCGADGTMKMRILPDQ 2997
Score = 42 (19.8 bits), Expect = 9.5e-22, Sum P(2) = 9.5e-22
Identities = 19/64 (29%), Positives = 28/64 (43%)
Query: 67 HQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFF--VTGAGDGDIKSP 124
HQ+L A GD C V RF A+ S + + + E + GA G+I+
Sbjct: 4 HQVLTGAVNPGDHCFAV--GSVGEQRFTAYASGCDIVILGSNFERLQIIPGAKHGNIQ-- 59
Query: 125 VKCL 128
V C+
Sbjct: 60 VGCV 63
Score = 40 (19.1 bits), Expect = 2.0e-22, Sum P(3) = 2.0e-22
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 100 VKCLAIDPHEEFFVTGAGDGDIK 122
V+ + P +++TGA DG ++
Sbjct: 2733 VRRMTSHPTLPYYLTGAQDGSVR 2755
Score = 37 (18.1 bits), Expect = 3.1e-21, Sum P(2) = 3.1e-21
Identities = 10/23 (43%), Positives = 11/23 (47%)
Query: 98 SPVKCLAIDPHEEFFVTGAGDGD 120
S V + P EFF T AG D
Sbjct: 167 SQVHLMKFSPDGEFFAT-AGKDD 188
Score = 35 (17.4 bits), Expect = 2.0e-22, Sum P(3) = 2.0e-22
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 18 SCSLVATAGHSSESKNVCL 36
S S++ ++ HS S N+ L
Sbjct: 570 STSMLISSAHSKSSNNLKL 588
>UNIPROTKB|Q8TDJ6 [details] [associations]
symbol:DMXL2 "DmX-like protein 2" species:9606 "Homo
sapiens" [GO:0030054 "cell junction" evidence=IEA] [GO:0030672
"synaptic vesicle membrane" evidence=IEA] [GO:0008021 "synaptic
vesicle" evidence=IDA] [GO:0017137 "Rab GTPase binding"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0030054 GO:GO:0008021 eggNOG:COG2319 GO:GO:0030672
GO:GO:0017137 HOGENOM:HOG000018348 HOVERGEN:HBG079593
InterPro:IPR022033 Pfam:PF12234 EMBL:AF389880 EMBL:AB020663
EMBL:AC020892 EMBL:AC066613 EMBL:BC140781 EMBL:BC144539
IPI:IPI00152542 IPI:IPI00896496 IPI:IPI00956271
RefSeq:NP_001167587.1 RefSeq:NP_001167588.1 RefSeq:NP_056078.2
UniGene:Hs.511386 ProteinModelPortal:Q8TDJ6 SMR:Q8TDJ6
IntAct:Q8TDJ6 STRING:Q8TDJ6 PhosphoSite:Q8TDJ6 DMDM:296434481
PaxDb:Q8TDJ6 PRIDE:Q8TDJ6 Ensembl:ENST00000251076
Ensembl:ENST00000449909 Ensembl:ENST00000543779 GeneID:23312
KEGG:hsa:23312 UCSC:uc002abf.3 CTD:23312 GeneCards:GC15M051739
H-InvDB:HIX0012246 H-InvDB:HIX0172819 HGNC:HGNC:2938 HPA:HPA039375
MIM:612186 neXtProt:NX_Q8TDJ6 PharmGKB:PA27392 InParanoid:Q8TDJ6
OMA:VYSKSDA OrthoDB:EOG4KWJRW PhylomeDB:Q8TDJ6 ChiTaRS:DMXL2
GenomeRNAi:23312 NextBio:45182 ArrayExpress:Q8TDJ6 Bgee:Q8TDJ6
CleanEx:HS_DMXL2 Genevestigator:Q8TDJ6 GermOnline:ENSG00000104093
Uniprot:Q8TDJ6
Length = 3036
Score = 394 (143.8 bits), Expect = 9.8e-35, P = 9.8e-35
Identities = 66/122 (54%), Positives = 95/122 (77%)
Query: 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASS 60
M++QCH+K TSDF F+ S SLVAT+GHS++++NVCLWD+L+ +L+ F CHD GA+
Sbjct: 2846 MSWQCHSKATSDFAFITSSSLVATSGHSNDNRNVCLWDTLISPGNSLIHGFTCHDHGATV 2905
Query: 61 LVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGD 120
L +AP+ QLLIS G+KG +C+ D+RQR + F AH+S +K LA+DP+EE+F TG+ +G+
Sbjct: 2906 LQYAPKQQLLISGGRKGHVCIFDIRQRQLIHTFQAHDSAIKALALDPYEEYFTTGSAEGN 2965
Query: 121 IK 122
IK
Sbjct: 2966 IK 2967
Score = 257 (95.5 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
Identities = 44/82 (53%), Positives = 65/82 (79%)
Query: 123 SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHV 182
S +K LA+DP+EE+F TG+ +G+IKVW L+G+ L+++F EHA+ S F++IG GV Q+ +
Sbjct: 2943 SAIKALALDPYEEYFTTGSAEGNIKVWRLTGHGLIHSFKSEHAKQSIFRNIGAGVMQIDI 3002
Query: 183 DGGSRLFSCGADGSMKVRQLPD 204
G+RLFSCGADG++K R LP+
Sbjct: 3003 IQGNRLFSCGADGTLKTRVLPN 3024
Score = 51 (23.0 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
V+ R N H VK + P ++++TGA DG ++
Sbjct: 2757 VLMKR-NLHN--VKRMTSHPVHQYYLTGAQDGSVR 2788
Score = 38 (18.4 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
Identities = 9/33 (27%), Positives = 20/33 (60%)
Query: 16 LGS-CSLVATAGHSSESKNVCLWDSLLPQKKAL 47
LG+ C+ + +S+ KN+ L+ +++ +K L
Sbjct: 771 LGTYCNSASACFVASDGKNLRLYQAVVDARKLL 803
Score = 36 (17.7 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 21/64 (32%), Positives = 28/64 (43%)
Query: 67 HQLLISAGKKGDICVIDLRQRVIRSRFNAHES--PVKCLAIDPHEEFFVTGAGDGDIK-S 123
HQ+L A GD C V F A+ S + LA D + GA G+I+ S
Sbjct: 4 HQVLTGAVNPGDNCYSV--GSVGDVPFTAYGSGCDIVILANDFECVQIIPGAKHGNIQVS 61
Query: 124 PVKC 127
V+C
Sbjct: 62 CVEC 65
>MGI|MGI:2444630 [details] [associations]
symbol:Dmxl2 "Dmx-like 2" species:10090 "Mus musculus"
[GO:0008021 "synaptic vesicle" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0017137 "Rab GTPase binding" evidence=ISO]
[GO:0030054 "cell junction" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2444630 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0030054 eggNOG:COG2319 GO:GO:0030672 HOGENOM:HOG000018348
HOVERGEN:HBG079593 InterPro:IPR022033 Pfam:PF12234
OrthoDB:EOG4KWJRW EMBL:AK032099 EMBL:AK053672 EMBL:AK164884
EMBL:CT010507 EMBL:AC161589 EMBL:AK173043 IPI:IPI00853917
IPI:IPI00853932 IPI:IPI00896744 UniGene:Mm.93636
ProteinModelPortal:Q8BPN8 SMR:Q8BPN8 IntAct:Q8BPN8 STRING:Q8BPN8
PhosphoSite:Q8BPN8 PaxDb:Q8BPN8 PRIDE:Q8BPN8
Ensembl:ENSMUST00000118600 UCSC:uc009prb.1
GeneTree:ENSGT00390000000096 Bgee:Q8BPN8 CleanEx:MM_DMXL2
Genevestigator:Q8BPN8 Uniprot:Q8BPN8
Length = 3032
Score = 380 (138.8 bits), Expect = 3.0e-33, P = 3.0e-33
Identities = 66/122 (54%), Positives = 93/122 (76%)
Query: 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASS 60
M++QCH+K TSDF F+ S SLVAT+GHS++++NVCLWD+L+ +L+ F CHD GA+
Sbjct: 2842 MSWQCHSKATSDFAFITSSSLVATSGHSNDNRNVCLWDTLISPGNSLIHGFTCHDHGATV 2901
Query: 61 LVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGD 120
L +AP+ QLLIS G+KG IC+ D+RQR + F AH+S +K LA+D EE+F TG+ +G+
Sbjct: 2902 LQYAPKQQLLISGGRKGYICIFDIRQRQLIHTFQAHDSAIKALALDSCEEYFTTGSAEGN 2961
Query: 121 IK 122
IK
Sbjct: 2962 IK 2963
Score = 238 (88.8 bits), Expect = 1.4e-21, Sum P(3) = 1.4e-21
Identities = 42/81 (51%), Positives = 61/81 (75%)
Query: 123 SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHV 182
S +K LA+D EE+F TG+ +G+IKVW L+G+ L+++F EHA+ S F++IG GV Q+ +
Sbjct: 2939 SAIKALALDSCEEYFTTGSAEGNIKVWRLTGHGLIHSFKSEHAKQSIFRNIGAGVMQIAI 2998
Query: 183 DGGSRLFSCGADGSMKVRQLP 203
+RLFSCGADG++K R LP
Sbjct: 2999 SQDNRLFSCGADGTLKTRVLP 3019
Score = 51 (23.0 bits), Expect = 1.4e-21, Sum P(3) = 1.4e-21
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
V+ R N H VK + P ++++TGA DG ++
Sbjct: 2753 VLMKR-NLHN--VKRMTSHPVHQYYLTGAQDGSVR 2784
Score = 40 (19.1 bits), Expect = 1.4e-21, Sum P(3) = 1.4e-21
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 16 LGS-CSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLV 62
LG+ C+ + +S+ KN+ L+ +++ +K L + D AS L+
Sbjct: 770 LGTYCNSASACFVASDGKNLRLYQAVVDARKLLDEL---SDPEASKLI 814
Score = 37 (18.1 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 21/64 (32%), Positives = 28/64 (43%)
Query: 67 HQLLISAGKKGDICVIDLRQRVIRSRFNAHES--PVKCLAIDPHEEFFVTGAGDGDIK-S 123
HQ+L A GD C V F A+ S + LA D + GA G+I+ S
Sbjct: 4 HQVLTGAVNPGDNCYSV--GSVGDVPFTAYGSGCDIVILASDFECVQIIPGAKHGNIQVS 61
Query: 124 PVKC 127
V+C
Sbjct: 62 CVEC 65
>RGD|1586163 [details] [associations]
symbol:Dmxl2 "Dmx-like 2" species:10116 "Rattus norvegicus"
[GO:0008021 "synaptic vesicle" evidence=ISO] [GO:0017137 "Rab
GTPase binding" evidence=ISO] REFSEQ:XM_003754427 Ncbi:XP_003754475
Length = 3055
Score = 374 (136.7 bits), Expect = 1.3e-32, P = 1.3e-32
Identities = 65/122 (53%), Positives = 92/122 (75%)
Query: 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASS 60
M++QCH+K TSDF F+ S SLVAT+G S++++NVCLWD+L+ +L+ F CHD GA+
Sbjct: 2865 MSWQCHSKATSDFAFITSSSLVATSGQSNDNRNVCLWDTLISPGNSLIHGFTCHDHGATV 2924
Query: 61 LVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGD 120
L +AP+ QLLIS G+KG IC+ D+RQR + F AH+S +K LA+D EE+F TG+ +G+
Sbjct: 2925 LQYAPKQQLLISGGRKGYICIFDIRQRQLMHTFQAHDSAIKALALDSCEEYFTTGSAEGN 2984
Query: 121 IK 122
IK
Sbjct: 2985 IK 2986
Score = 240 (89.5 bits), Expect = 9.1e-22, Sum P(3) = 9.1e-22
Identities = 42/81 (51%), Positives = 61/81 (75%)
Query: 123 SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHV 182
S +K LA+D EE+F TG+ +G+IKVW L+G+ L+++F EHA+ S F++IG GV Q+ +
Sbjct: 2962 SAIKALALDSCEEYFTTGSAEGNIKVWRLTGHGLIHSFKSEHAKQSIFRNIGAGVMQIEI 3021
Query: 183 DGGSRLFSCGADGSMKVRQLP 203
+RLFSCGADG++K R LP
Sbjct: 3022 SQDNRLFSCGADGTLKTRVLP 3042
Score = 51 (23.0 bits), Expect = 9.1e-22, Sum P(3) = 9.1e-22
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
V+ R N H VK + P ++++TGA DG ++
Sbjct: 2776 VLMKR-NLHN--VKRMTSHPVHQYYLTGAQDGSVR 2807
Score = 40 (19.1 bits), Expect = 9.1e-22, Sum P(3) = 9.1e-22
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 16 LGS-CSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLV 62
LG+ C+ + +S+ KN+ L+ +++ +K L + D AS L+
Sbjct: 770 LGTYCNSASACFVASDGKNLRLYQAVVDARKLLDEL---SDPEASKLI 814
>DICTYBASE|DDB_G0283535 [details] [associations]
symbol:DDB_G0283535 "DmX-like protein" species:44689
"Dictyostelium discoideum" [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0283535
GenomeReviews:CM000153_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
EMBL:AAFI02000055 eggNOG:NOG314136 InterPro:IPR022033 Pfam:PF12234
RefSeq:XP_001733008.1 ProteinModelPortal:B0G145 PRIDE:B0G145
EnsemblProtists:DDB0238630 GeneID:8624150 KEGG:ddi:DDB_G0283535
OMA:KPSNDLG ProtClustDB:CLSZ2736334 Uniprot:B0G145
Length = 2792
Score = 279 (103.3 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 56/122 (45%), Positives = 79/122 (64%)
Query: 4 QCHNKITSDFVFLGSCSLVATAGHSS---ESKNVCLWDSLLPQKKALVQAFVCHDQGASS 60
Q H+K DF FL S SL+ATAG SS +S+++CLWD LLP K+L+ ++ + GASS
Sbjct: 2606 QAHSKQCLDFTFLNSGSLLATAGISSSDSKSRDICLWDVLLPPNKSLIASYTDQENGASS 2665
Query: 61 LVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGD 120
+V++P+ Q +I GKKG + + D+R F AH K LA+DP EEF +G+ DG+
Sbjct: 2666 IVYSPKRQTIIVGGKKGSLSLYDIRTHKQLESFKAHHLNTKSLALDPFEEFVCSGSSDGN 2725
Query: 121 IK 122
IK
Sbjct: 2726 IK 2727
Score = 140 (54.3 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 32/83 (38%), Positives = 45/83 (54%)
Query: 126 KCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIG--------QGV 177
K LA+DP EEF +G+ DG+IK+WSL L F H + +F + G GV
Sbjct: 2706 KSLALDPFEEFVCSGSSDGNIKIWSLPSMTCLNTFEDAHKKQTFVRPTGVFKSPVSTYGV 2765
Query: 178 TQLHVDGGSRLFSCGADGSMKVR 200
Q+ ++ LFSCG+DG + R
Sbjct: 2766 MQVRLENNG-LFSCGSDGRVTKR 2787
Score = 55 (24.4 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 91 SRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121
SR H V+CL P+ F+++G DG +
Sbjct: 2514 SRQMDHNIIVQCLESHPNSSFYLSGGIDGSV 2544
Score = 38 (18.4 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 98 SPVKCLAIDPHEEFFVT-GAGDGDIK 122
SP+ L+ P FF T G D IK
Sbjct: 245 SPINNLSCSPDGSFFATCGKFDRLIK 270
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 119 (46.9 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 37/120 (30%), Positives = 57/120 (47%)
Query: 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLV 62
++ H + F +C +ATA S + LW SL P +A +V H +SL
Sbjct: 14 FKGHKAAITSADFSPNCKQIATA---SWDTFLMLW-SLKPHARAY--RYVGHKDVVTSLQ 67
Query: 63 FAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
F+PQ LL SA + + + L ++ S F AH +PV+ + +F VT + D IK
Sbjct: 68 FSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIK 127
Score = 105 (42.0 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 27/95 (28%), Positives = 42/95 (44%)
Query: 29 SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLV-FAPQHQLLISAGKKGDICVIDLRQR 87
SE K + +WD+ K V F G ++ V F+P + SAG + + D+R
Sbjct: 163 SEDKTIKIWDTT---SKQCVNNF-SDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMN 218
Query: 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
+ + H V CL+ P VT + DG +K
Sbjct: 219 RLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVK 253
Score = 69 (29.3 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 18/62 (29%), Positives = 26/62 (41%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG 184
V CL+ P VT + DG +K+ L L+Y G H F + +L G
Sbjct: 231 VNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQG-HTGPVFTVSFSKD-GELFTSG 288
Query: 185 GS 186
G+
Sbjct: 289 GA 290
Score = 60 (26.2 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 124 PVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGE 163
PV ++ E F +G D + VW S N + Y P +
Sbjct: 272 PVFTVSFSKDGELFTSGGADAQVLVWRTSFNQVHYRDPSK 311
Score = 57 (25.1 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 19/76 (25%), Positives = 36/76 (47%)
Query: 138 VTGAG-DGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGS 196
+ AG D +++W + N LL ++ H+ G H G S L + +DG+
Sbjct: 201 IASAGSDHAVRIWDIRMNRLLQHYQ-VHS-------CGVNCLSFHPSGNS-LVTASSDGT 251
Query: 197 MKVRQLPDRDAVVHTL 212
+K+ L + +++TL
Sbjct: 252 VKILDLVE-GRLIYTL 266
Score = 54 (24.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNF 160
V+C P V+ + D IK+W + + NF
Sbjct: 147 VRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNF 182
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 114 (45.2 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 36/121 (29%), Positives = 57/121 (47%)
Query: 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSL 61
+++ H + F +C +ATA S + LW SL P +A +V H +SL
Sbjct: 13 SFKGHKAAITSADFSPNCKQIATA---SWDTFLMLW-SLKPHARAY--RYVGHKDVVTSL 66
Query: 62 VFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121
F+PQ LL SA + + + L ++ S F AH +PV+ + + VT + D I
Sbjct: 67 QFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSI 126
Query: 122 K 122
K
Sbjct: 127 K 127
Score = 90 (36.7 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 33/121 (27%), Positives = 52/121 (42%)
Query: 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLV 62
Y H + + F +L+A+A S + V LW + +K F H S+
Sbjct: 56 YVGHKDVVTSLQFSPQGNLLASA---SRDRTVRLW---VLDRKGKSSEFKAHTAPVRSVD 109
Query: 63 FAPQHQLLISAGKKGDICVIDL-RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121
F+ QLL++A + I V + RQR + S + H V+C P V+ + D I
Sbjct: 110 FSADGQLLVTASEDKSIKVWSMFRQRFLYSLYR-HTHWVRCAKFSPDGRLIVSCSEDKTI 168
Query: 122 K 122
K
Sbjct: 169 K 169
Score = 67 (28.6 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 22/75 (29%), Positives = 29/75 (38%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG 184
V CL+ P VT + DG +K+ L L+Y G H G T
Sbjct: 231 VNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQG---------HTGPVFTVSFSKD 281
Query: 185 GSRLFSCGADGSMKV 199
G L S GAD + +
Sbjct: 282 GELLTSGGADAQVLI 296
Score = 54 (24.1 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNF 160
V+C P V+ + D IK+W + + NF
Sbjct: 147 VRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 182
Score = 53 (23.7 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 19/82 (23%), Positives = 37/82 (45%)
Query: 131 DPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFS 190
+P+ + D +K+W + N LL ++ H+ G H G S L +
Sbjct: 195 NPNGTCIASAGSDHAVKIWDIRMNKLLQHYQ-VHS-------CGVNCLSFHPLGNS-LVT 245
Query: 191 CGADGSMKVRQLPDRDAVVHTL 212
+DG++K+ L + +++TL
Sbjct: 246 ASSDGTVKMLDLIE-GRLIYTL 266
Score = 45 (20.9 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 10/48 (20%), Positives = 19/48 (39%)
Query: 124 PVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFK 171
PV ++ E +G D + +W + HL P + + F+
Sbjct: 272 PVFTVSFSKDGELLTSGGADAQVLIWRTNFIHLHCKDPKRNLKRLHFE 319
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 88 (36.0 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 26/81 (32%), Positives = 38/81 (46%)
Query: 46 ALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL----RQRVIRSRFNAHESPVK 101
A V+ V H SSLV L++ G GD C ++L + I S H SPV+
Sbjct: 15 AAVEEIVAHASNVSSLVLGKASGRLLATG--GDDCRVNLWSINKPNCIMS-LTGHTSPVE 71
Query: 102 CLAIDPHEEFFVTGAGDGDIK 122
+ ++ EE V G+ G I+
Sbjct: 72 SVRLNTPEELIVAGSQSGSIR 92
Score = 76 (31.8 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPG 162
V+CL P ++ + A D +K+W L+ ++ FPG
Sbjct: 154 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 191
Score = 62 (26.9 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 12/46 (26%), Positives = 26/46 (56%)
Query: 122 KSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARS 167
K+ + L P+ EF +G+ D +IK+W + ++ + G H+++
Sbjct: 109 KANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRG-HSQA 153
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 109 (43.4 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 27/95 (28%), Positives = 43/95 (45%)
Query: 29 SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLV-FAPQHQLLISAGKKGDICVIDLRQR 87
SE K + +WD+ K V F G ++ V F P + SAG + V D+R
Sbjct: 163 SEDKTIKIWDTT---NKQCVNNF-SDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVN 218
Query: 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
+ + H V C++ P + + VT + DG +K
Sbjct: 219 KLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLK 253
Score = 92 (37.4 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 33/121 (27%), Positives = 51/121 (42%)
Query: 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLV 62
Y H + + F +L+A+A S + V LW +P K+ F H S+
Sbjct: 56 YVGHKDVVTSVQFSPHGNLLASA---SRDRTVRLW---IPDKRGKFSEFKAHTAPVRSVD 109
Query: 63 FAPQHQLLISAGKKGDICVIDL-RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121
F+ Q L +A + I V + RQR + S + H V+C P V+ + D I
Sbjct: 110 FSADGQFLATASEDKSIKVWSMYRQRFLYSLYR-HTHWVRCAKFSPDGRLIVSCSEDKTI 168
Query: 122 K 122
K
Sbjct: 169 K 169
Score = 84 (34.6 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 29/114 (25%), Positives = 48/114 (42%)
Query: 15 FLGSCSLVATAGHSSESKNVCL--WDSLLP----QKKALVQAFVCHDQGASSLVFAPQHQ 68
F G + + + S K + WD+ L + A +V H +S+ F+P
Sbjct: 14 FKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGN 73
Query: 69 LLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
LL SA + + + +R S F AH +PV+ + +F T + D IK
Sbjct: 74 LLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIK 127
Score = 82 (33.9 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG 184
V C++ P + + VT + DG +K+ L L+Y G H F +G +L G
Sbjct: 231 VNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQG-HTGPVFTVSFSKG-GELFASG 288
Query: 185 GS 186
G+
Sbjct: 289 GA 290
Score = 40 (19.1 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 124 PVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHL 156
PV ++ E F +G D + +W + + L
Sbjct: 272 PVFTVSFSKGGELFASGGADTQVLLWRTNFDEL 304
>UNIPROTKB|Q6ZMW3 [details] [associations]
symbol:EML6 "Echinoderm microtubule-associated protein-like
6" species:9606 "Homo sapiens" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0005874 InterPro:IPR005108
Pfam:PF03451 HOGENOM:HOG000031037 OrthoDB:EOG4W3SM4 EMBL:AC013414
EMBL:AC093110 EMBL:AC104781 EMBL:AK131467 IPI:IPI00847255
IPI:IPI00895879 RefSeq:NP_001034842.2 UniGene:Hs.656692
ProteinModelPortal:Q6ZMW3 SMR:Q6ZMW3 STRING:Q6ZMW3
PhosphoSite:Q6ZMW3 DMDM:190358904 PRIDE:Q6ZMW3
Ensembl:ENST00000356458 GeneID:400954 KEGG:hsa:400954
UCSC:uc002ryb.4 CTD:400954 GeneCards:GC02P054950 HGNC:HGNC:35412
neXtProt:NX_Q6ZMW3 PharmGKB:PA164719036 OMA:HTAAAGI
GenomeRNAi:400954 NextBio:106344 Bgee:Q6ZMW3 Genevestigator:Q6ZMW3
Uniprot:Q6ZMW3
Length = 1958
Score = 104 (41.7 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 31/110 (28%), Positives = 49/110 (44%)
Query: 20 SLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG--KKG 77
+LVAT G + +C+WDS Q +L++ H G + L F Q L S G K
Sbjct: 74 TLVAT-GQVGKEPYICIWDSYNVQTVSLLKDV--HTHGVACLAFDSDGQRLASVGLDAKN 130
Query: 78 DICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKC 127
+C+ D R+ + + H + ++ DP++ V G IK C
Sbjct: 131 TVCIWDWRKGKLLASATGHSDRIFDISWDPYQPNRVVSCGVKHIKFWTLC 180
Score = 80 (33.2 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 27/95 (28%), Positives = 46/95 (48%)
Query: 119 GDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHA-RSSFFKHIGQGV 177
G + + LA+ P + VTG+ D +++WSL+ + L+ E A RS F G +
Sbjct: 322 GHCEGELWALALHPKKPLAVTGSDDRSVRLWSLADHALIARCNMEEAVRSVAFSPDGSQL 381
Query: 178 TQLHVDGGSRLFSCGADGSMKVRQLPDRDAVVHTL 212
L + GS + D + +V + DR V+H +
Sbjct: 382 A-LGMKDGSFIVLRVRDMT-EVVHIKDRKEVIHEM 414
Score = 77 (32.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 17/61 (27%), Positives = 31/61 (50%)
Query: 118 DGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFP-GEHARSSFFKHIGQG 176
DG ++ + LA P ++ F++ + DG ++W L+ LL G AR + + G+
Sbjct: 1683 DGHMEGEIWGLATHPSKDLFISASNDGTARIWDLADKKLLNKVSLGHAARCAAYSPDGEM 1742
Query: 177 V 177
V
Sbjct: 1743 V 1743
Score = 67 (28.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 119 GDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHI-GQGV 177
GD+++ + CLA E+ +GA +GDI VW G +L+ G H+ F + +G
Sbjct: 195 GDLQT-ILCLAC-AKEDITYSGALNGDIYVWK--GLNLVRTIQGAHSAGIFSMYACEEGF 250
Query: 178 TQLHVDGGSRLF 189
DG RL+
Sbjct: 251 ATGGRDGCIRLW 262
Score = 63 (27.2 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 21/75 (28%), Positives = 35/75 (46%)
Query: 120 DIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARS-SFFKHIGQGVT 178
D K + + P + G+ DG + V++++ Y GE ++S SF HI +
Sbjct: 406 DRKEVIHEMKFSPDGSYLAVGSNDGPVDVYAVAQR---YKKIGECSKSLSFITHIDWSLD 462
Query: 179 QLHV---DG-GSRLF 189
++ DG G RLF
Sbjct: 463 SKYLQTNDGAGERLF 477
>UNIPROTKB|F1PX92 [details] [associations]
symbol:EML6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001610 GO:GO:0007165 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SMART:SM00086 InterPro:IPR005108 Pfam:PF03451
GeneTree:ENSGT00550000074369 EMBL:AAEX03007528
Ensembl:ENSCAFT00000004419 Uniprot:F1PX92
Length = 1841
Score = 103 (41.3 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 30/110 (27%), Positives = 50/110 (45%)
Query: 20 SLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG--KKG 77
+LVAT G + +C+WDS Q ++++ H G + L F Q L S G K
Sbjct: 74 TLVAT-GQVGKEPYICIWDSYNVQTVSILKDV--HTHGVACLAFDSDGQRLASVGLDAKN 130
Query: 78 DICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKC 127
+C+ D R+ + + H + ++ DP++ V G IK + C
Sbjct: 131 TVCIWDWRKGKLLASATGHSDRIFDISWDPYQPNRVVSCGVKHIKFWMLC 180
Score = 80 (33.2 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 27/95 (28%), Positives = 46/95 (48%)
Query: 119 GDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHA-RSSFFKHIGQGV 177
G + + LA+ P + VTG+ D +++WSL+ + L+ E A RS F G +
Sbjct: 322 GHCEGELWALALHPKKPLAVTGSDDRSVRLWSLADHALIARCNMEEAVRSVAFSPDGSQL 381
Query: 178 TQLHVDGGSRLFSCGADGSMKVRQLPDRDAVVHTL 212
L + GS + D + +V + DR V+H +
Sbjct: 382 A-LGMKDGSFIVLRVRDMT-EVVHIKDRKEVIHEM 414
Score = 75 (31.5 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 17/61 (27%), Positives = 31/61 (50%)
Query: 118 DGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFP-GEHARSSFFKHIGQG 176
DG ++ + LA P ++ F++ + DG ++W L+ LL G AR + + G+
Sbjct: 1683 DGHMEGEIWGLATHPTKDIFISASNDGTARIWDLADKKLLNKVNLGHAARCAAYSPDGEM 1742
Query: 177 V 177
V
Sbjct: 1743 V 1743
Score = 67 (28.6 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 119 GDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHI-GQGV 177
GD+++ + CLA E+ +GA +GDI VW G +L+ G H+ F + +G
Sbjct: 195 GDLQT-ILCLAC-AKEDITYSGALNGDIYVWK--GLNLVRTIQGAHSAGIFSMYACEEGF 250
Query: 178 TQLHVDGGSRLF 189
DG RL+
Sbjct: 251 ATGGRDGCIRLW 262
Score = 63 (27.2 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 21/75 (28%), Positives = 35/75 (46%)
Query: 120 DIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARS-SFFKHIGQGVT 178
D K + + P + G+ DG + V++++ Y GE ++S SF HI +
Sbjct: 406 DRKEVIHEMKFSPDGSYLAVGSNDGPVDVYAVAQR---YKKIGECSKSLSFITHIDWSLD 462
Query: 179 QLHV---DG-GSRLF 189
++ DG G RLF
Sbjct: 463 SKYLQTNDGAGERLF 477
>UNIPROTKB|J9P7H8 [details] [associations]
symbol:EML6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001610 GO:GO:0007165 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SMART:SM00086 InterPro:IPR005108 Pfam:PF03451
GeneTree:ENSGT00550000074369 OMA:HTAAAGI EMBL:AAEX03007528
Ensembl:ENSCAFT00000045075 Uniprot:J9P7H8
Length = 1882
Score = 103 (41.3 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 30/110 (27%), Positives = 50/110 (45%)
Query: 20 SLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG--KKG 77
+LVAT G + +C+WDS Q ++++ H G + L F Q L S G K
Sbjct: 74 TLVAT-GQVGKEPYICIWDSYNVQTVSILKDV--HTHGVACLAFDSDGQRLASVGLDAKN 130
Query: 78 DICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKC 127
+C+ D R+ + + H + ++ DP++ V G IK + C
Sbjct: 131 TVCIWDWRKGKLLASATGHSDRIFDISWDPYQPNRVVSCGVKHIKFWMLC 180
Score = 80 (33.2 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 27/95 (28%), Positives = 46/95 (48%)
Query: 119 GDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHA-RSSFFKHIGQGV 177
G + + LA+ P + VTG+ D +++WSL+ + L+ E A RS F G +
Sbjct: 322 GHCEGELWALALHPKKPLAVTGSDDRSVRLWSLADHALIARCNMEEAVRSVAFSPDGSQL 381
Query: 178 TQLHVDGGSRLFSCGADGSMKVRQLPDRDAVVHTL 212
L + GS + D + +V + DR V+H +
Sbjct: 382 A-LGMKDGSFIVLRVRDMT-EVVHIKDRKEVIHEM 414
Score = 75 (31.5 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 17/61 (27%), Positives = 31/61 (50%)
Query: 118 DGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFP-GEHARSSFFKHIGQG 176
DG ++ + LA P ++ F++ + DG ++W L+ LL G AR + + G+
Sbjct: 1683 DGHMEGEIWGLATHPTKDIFISASNDGTARIWDLADKKLLNKVNLGHAARCAAYSPDGEM 1742
Query: 177 V 177
V
Sbjct: 1743 V 1743
Score = 67 (28.6 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 119 GDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHI-GQGV 177
GD+++ + CLA E+ +GA +GDI VW G +L+ G H+ F + +G
Sbjct: 195 GDLQT-ILCLAC-AKEDITYSGALNGDIYVWK--GLNLVRTIQGAHSAGIFSMYACEEGF 250
Query: 178 TQLHVDGGSRLF 189
DG RL+
Sbjct: 251 ATGGRDGCIRLW 262
Score = 63 (27.2 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 21/75 (28%), Positives = 35/75 (46%)
Query: 120 DIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARS-SFFKHIGQGVT 178
D K + + P + G+ DG + V++++ Y GE ++S SF HI +
Sbjct: 406 DRKEVIHEMKFSPDGSYLAVGSNDGPVDVYAVAQR---YKKIGECSKSLSFITHIDWSLD 462
Query: 179 QLHV---DG-GSRLF 189
++ DG G RLF
Sbjct: 463 SKYLQTNDGAGERLF 477
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 85 (35.0 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 25/79 (31%), Positives = 37/79 (46%)
Query: 48 VQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL----RQRVIRSRFNAHESPVKCL 103
+Q V H SSLV L++ G GD C ++L + I S H SPV+ +
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATG--GDDCRVNLWSINKPNCIMS-LTGHTSPVESV 69
Query: 104 AIDPHEEFFVTGAGDGDIK 122
++ EE V G+ G I+
Sbjct: 70 RLNTPEELIVAGSQSGSIR 88
Score = 76 (31.8 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPG 162
V+CL P ++ + A D +K+W L+ ++ FPG
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
Score = 62 (26.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 12/46 (26%), Positives = 26/46 (56%)
Query: 122 KSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARS 167
K+ + L P+ EF +G+ D +IK+W + ++ + G H+++
Sbjct: 105 KANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRG-HSQA 149
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 131 (51.2 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 30/98 (30%), Positives = 51/98 (52%)
Query: 25 AGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL 84
A SS++ N+ +WD+ +KK +Q + H +G S++ F+P + ++S G + V DL
Sbjct: 116 ASGSSDT-NLRVWDT---RKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDL 171
Query: 85 RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
+ F HE P++ L P E TG+ D +K
Sbjct: 172 TAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVK 209
Score = 95 (38.5 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 31/118 (26%), Positives = 51/118 (43%)
Query: 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFA 64
C + D V S ++ AG SS + LWD L + K +V+AF H S++ F
Sbjct: 55 CGHTSPVDSVAFNSEEVLVLAGASSGV--IKLWD--LEESK-MVRAFTGHRSNCSAVEFH 109
Query: 65 PQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
P + L S ++ V D R++ + H + + P + V+G D +K
Sbjct: 110 PFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVK 167
Score = 67 (28.6 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 23/78 (29%), Positives = 31/78 (39%)
Query: 122 KSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLH 181
+ P++ L P E TG+ D +K W L L+ E G H
Sbjct: 184 EGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEAT--------GVRAIAFH 235
Query: 182 VDGGSRLFSCGADGSMKV 199
DG + LF CG D +KV
Sbjct: 236 PDGQT-LF-CGLDDGLKV 251
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 92 (37.4 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 33/121 (27%), Positives = 51/121 (42%)
Query: 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLV 62
Y H + + F +L+A+A S + V LW +P K+ F H S+
Sbjct: 14 YVGHKDVVTSVQFSPHGNLLASA---SRDRTVRLW---IPDKRGKFSEFKAHTAPVRSVD 67
Query: 63 FAPQHQLLISAGKKGDICVIDL-RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121
F+ Q L +A + I V + RQR + S + H V+C P V+ + D I
Sbjct: 68 FSADGQFLATASEDKSIKVWSMYRQRFLYSLYR-HTHWVRCAKFSPDGRLIVSCSEDKTI 126
Query: 122 K 122
K
Sbjct: 127 K 127
Score = 82 (33.9 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 25/87 (28%), Positives = 40/87 (45%)
Query: 36 LWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNA 95
LW+ P +A +V H +S+ F+P LL SA + + + +R S F A
Sbjct: 2 LWN-FKPHARAY--RYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKA 58
Query: 96 HESPVKCLAIDPHEEFFVTGAGDGDIK 122
H +PV+ + +F T + D IK
Sbjct: 59 HTAPVRSVDFSADGQFLATASEDKSIK 85
Score = 77 (32.2 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 17/62 (27%), Positives = 28/62 (45%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG 184
V C++ P + +T + DG +K+ L L+Y G H F +G +L G
Sbjct: 189 VNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQG-HTGPVFTVSFSKG-GELFASG 246
Query: 185 GS 186
G+
Sbjct: 247 GA 248
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 92 (37.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 33/121 (27%), Positives = 51/121 (42%)
Query: 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLV 62
Y H + + F +L+A+A S + V LW +P K+ F H S+
Sbjct: 56 YVGHKDVVTSVQFSPHGNLLASA---SRDRTVRLW---IPDKRGKFSEFKAHTAPVRSVD 109
Query: 63 FAPQHQLLISAGKKGDICVIDL-RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121
F+ Q L +A + I V + RQR + S + H V+C P V+ + D I
Sbjct: 110 FSADGQFLATASEDKSIKVWSMYRQRFLYSLYR-HTHWVRCAKFSPDGRLIVSCSEDKTI 168
Query: 122 K 122
K
Sbjct: 169 K 169
Score = 84 (34.6 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 29/114 (25%), Positives = 48/114 (42%)
Query: 15 FLGSCSLVATAGHSSESKNVCL--WDSLLP----QKKALVQAFVCHDQGASSLVFAPQHQ 68
F G + + + S K + WD+ L + A +V H +S+ F+P
Sbjct: 14 FKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGN 73
Query: 69 LLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
LL SA + + + +R S F AH +PV+ + +F T + D IK
Sbjct: 74 LLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIK 127
Score = 77 (32.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 17/62 (27%), Positives = 28/62 (45%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG 184
V C++ P + +T + DG +K+ L L+Y G H F +G +L G
Sbjct: 231 VNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQG-HTGPVFTVSFSKG-GELFASG 288
Query: 185 GS 186
G+
Sbjct: 289 GA 290
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 105 (42.0 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 24/94 (25%), Positives = 41/94 (43%)
Query: 29 SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRV 88
SE K + +WD+ K V F A+ + F P + SAG + + D+R
Sbjct: 163 SEDKTIKIWDTT---NKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNK 219
Query: 89 IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
+ + H V C++ P + +T + DG +K
Sbjct: 220 LLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLK 253
Score = 91 (37.1 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 28/87 (32%), Positives = 42/87 (48%)
Query: 36 LWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNA 95
LW SL PQ +A +V H +S+ F+P LL SA + I + +R S F A
Sbjct: 44 LW-SLRPQARAF--RYVGHKDVITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKA 100
Query: 96 HESPVKCLAIDPHEEFFVTGAGDGDIK 122
H +PV+ + +F + + D IK
Sbjct: 101 HTAPVRSVDFSADGQFLASASEDKSIK 127
Score = 76 (31.8 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 17/62 (27%), Positives = 28/62 (45%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG 184
V C++ P + +T + DG +K+ L L+Y G H F +G +L G
Sbjct: 231 VNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQG-HTGPVFTVSFSKG-GELFTSG 288
Query: 185 GS 186
G+
Sbjct: 289 GA 290
Score = 63 (27.2 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 19/85 (22%), Positives = 39/85 (45%)
Query: 128 LAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR 187
+A +P+ + D +K+W + N LL ++ H+ G H G+
Sbjct: 192 VAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQ-VHSG-------GVNCVSFH-PSGNY 242
Query: 188 LFSCGADGSMKVRQLPDRDAVVHTL 212
L + +DG++K+ L + +++TL
Sbjct: 243 LITASSDGTLKILDLLE-GRLIYTL 266
Score = 46 (21.3 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 124 PVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLY 158
PV ++ E F +G D + +W + + L Y
Sbjct: 272 PVFTVSFSKGGELFTSGGADAQVLLWRTNFDELNY 306
>RGD|708344 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein), beta
polypeptide 3" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043005 "neuron projection" evidence=IDA] [GO:0044297 "cell
body" evidence=IDA] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 RGD:708344 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043005 GO:GO:0004871
GO:GO:0044297 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C
EMBL:L29090 EMBL:BC086422 IPI:IPI00204239 PIR:I53871
RefSeq:NP_068630.1 UniGene:Rn.27065 ProteinModelPortal:P52287
SMR:P52287 STRING:P52287 PhosphoSite:P52287 PRIDE:P52287
Ensembl:ENSRNOT00000021481 GeneID:60449 KEGG:rno:60449
UCSC:RGD:708344 InParanoid:P52287 NextBio:612200
ArrayExpress:P52287 Genevestigator:P52287
GermOnline:ENSRNOG00000015541 Uniprot:P52287
Length = 340
Score = 113 (44.8 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 30/108 (27%), Positives = 49/108 (45%)
Query: 15 FLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG 74
FL ++V ++G ++ LWD Q+K + FV H SL +P ++L IS
Sbjct: 151 FLDDNNIVTSSGDTT----CALWDIETGQQKTV---FVGHTGDCMSLAVSPDYKLFISGA 203
Query: 75 KKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
+ D+R+ R F HES + + P+ E TG+ D +
Sbjct: 204 CDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCR 251
Score = 45 (20.9 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWS 150
V CL + TG+ D +K+W+
Sbjct: 315 VSCLGVTADGMAVATGSWDSFLKIWN 340
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 125 (49.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 56/201 (27%), Positives = 81/201 (40%)
Query: 29 SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRV 88
S + LW+ Q+ AL++ H G + L F LIS I + + R
Sbjct: 290 SYDATIRLWNLATFQQVALLEG---HSSGVTCLQF--DQCKLISGSMDKTIRIWNYRTSE 344
Query: 89 IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------SPVKCLAIDP 132
S + H V CL D V+G+ D +K PV + I
Sbjct: 345 CISILHGHTDSVLCLTFD--STLLVSGSADCTVKLWHFSGGKRITLRGHTGPVNSVRIIR 402
Query: 133 HEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCG 192
++G+ D IK+WSL N L+ F HIG V L + SRLFSC
Sbjct: 403 DRGLVLSGSDDSTIKIWSLETNTCLHTFSA---------HIGP-VQSLAL-ADSRLFSCS 451
Query: 193 ADGSMKVRQLPDRDAVVHTLY 213
DG++K + ++ VHTL+
Sbjct: 452 LDGTIKQWDI-EKKKCVHTLF 471
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 91 (37.1 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 31/116 (26%), Positives = 50/116 (43%)
Query: 15 FLGSCSLVATAGHSSESKNVCL--WDSLL------PQKKALVQAFVCHDQGASSLVFAPQ 66
F G + + + S K + WD+ L PQ +A +V H +S+ F+P
Sbjct: 14 FKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAF--RYVGHKDVVTSVQFSPL 71
Query: 67 HQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
LL SA + + + +R S F AH +PV+ + +F T + D IK
Sbjct: 72 GNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIK 127
Score = 91 (37.1 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 33/121 (27%), Positives = 52/121 (42%)
Query: 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLV 62
Y H + + F +L+A+A S + V LW +P K+ F H S+
Sbjct: 56 YVGHKDVVTSVQFSPLGNLLASA---SRDRTVRLW---IPDKRGKSSEFKAHTAPVRSVD 109
Query: 63 FAPQHQLLISAGKKGDICVIDL-RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121
F+ Q L +A + I V ++ RQR + S + H V+C P V+ + D I
Sbjct: 110 FSADGQFLATASEDKSIKVWNMYRQRFLYSLYR-HTHWVRCAKFSPDGRLIVSCSEDKTI 168
Query: 122 K 122
K
Sbjct: 169 K 169
Score = 74 (31.1 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 17/62 (27%), Positives = 28/62 (45%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG 184
V C++ P + +T + DG +K+ L L+Y G H F +G +L G
Sbjct: 231 VNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQG-HTGPVFTVSFSKG-GELFSSG 288
Query: 185 GS 186
G+
Sbjct: 289 GA 290
>RGD|1305142 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1305142 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 CTD:10607
HOGENOM:HOG000188765 HOVERGEN:HBG058869 KO:K14555 OrthoDB:EOG42JNQR
GeneTree:ENSGT00690000102183 EMBL:BC085837 IPI:IPI00369236
RefSeq:NP_001008278.1 UniGene:Rn.32013 ProteinModelPortal:Q5U2W5
STRING:Q5U2W5 PRIDE:Q5U2W5 Ensembl:ENSRNOT00000018405 GeneID:287120
KEGG:rno:287120 UCSC:RGD:1305142 InParanoid:Q5U2W5 NextBio:625544
Genevestigator:Q5U2W5 Uniprot:Q5U2W5
Length = 800
Score = 92 (37.4 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 29/121 (23%), Positives = 53/121 (43%)
Query: 5 CHNKITSDFVFLGS--CSL-VATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSL 61
C +++ F+ GS C++ + + SKN L+P + Q CHD+ +SL
Sbjct: 428 CCSRLKESFLVTGSQDCTVKLWPLPEALPSKNTASDGDLIPLQAQSTQR--CHDKDINSL 485
Query: 62 VFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121
+P +LL + + + L Q + F+ H + + P ++ T + DG I
Sbjct: 486 AVSPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWNVQFSPTDQVLATASADGTI 545
Query: 122 K 122
K
Sbjct: 546 K 546
Score = 78 (32.5 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 23/77 (29%), Positives = 35/77 (45%)
Query: 132 PHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSC 191
P ++ T + DG IK+W+L L F G A S K V G++L S
Sbjct: 531 PTDQVLATASADGTIKLWALQDFSCLKTFEGHDA--SVLK-------VAFVSRGAQLLSS 581
Query: 192 GADGSMKVRQLPDRDAV 208
G+DG +K+ + + V
Sbjct: 582 GSDGLLKLWTIKSNECV 598
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 115 (45.5 bits), Expect = 0.00013, P = 0.00013
Identities = 29/105 (27%), Positives = 49/105 (46%)
Query: 17 GSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK 76
G+C +A AG K V +WD + + L+Q + H +SL F P LI+A
Sbjct: 200 GTC--IAAAG---TDKTVKVWDVRMNR---LLQHYQVHTAAVNSLSFHPSGNYLITASND 251
Query: 77 GDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121
+ ++DL + + + H+ P C+A +FF +G D +
Sbjct: 252 STLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQV 296
Score = 101 (40.6 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 26/102 (25%), Positives = 46/102 (45%)
Query: 21 LVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDIC 80
L+A+A S+ K V LWD + + +F H A+ + F P + +AG +
Sbjct: 160 LIASA---SDDKTVKLWDKT---SRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVK 213
Query: 81 VIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
V D+R + + H + V L+ P + +T + D +K
Sbjct: 214 VWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLK 255
Score = 57 (25.1 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 122 KSPVKCLAIDPHEEFFVTGAGDGDIKVW 149
+ P C+A +FF +G D + VW
Sbjct: 272 QGPATCVAFSRTGDFFASGGSDEQVMVW 299
>UNIPROTKB|E1BB14 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:DAAA02014455 IPI:IPI00703992 RefSeq:NP_001179276.1
UniGene:Bt.16171 ProteinModelPortal:E1BB14
Ensembl:ENSBTAT00000021348 GeneID:513340 KEGG:bta:513340
NextBio:20870819 Uniprot:E1BB14
Length = 340
Score = 110 (43.8 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 30/108 (27%), Positives = 48/108 (44%)
Query: 15 FLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG 74
FL ++V ++G ++ LWD Q+K + FV H SL +P +L IS
Sbjct: 151 FLDDNNIVTSSGDTT----CALWDIETGQQKTV---FVGHTGDCMSLAVSPDFRLFISGA 203
Query: 75 KKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
+ D+R+ R F HES + + P+ E TG+ D +
Sbjct: 204 CDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCR 251
Score = 45 (20.9 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWS 150
V CL + TG+ D +K+W+
Sbjct: 315 VSCLGVTADGMAVATGSWDSFLKIWN 340
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 123 (48.4 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 26/90 (28%), Positives = 45/90 (50%)
Query: 33 NVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSR 92
N+ +WD +KK + + H +G + L F P + ++S G+ + V DL + +
Sbjct: 124 NLKIWDI---RKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTE 180
Query: 93 FNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
F +HE ++ L PHE TG+ D +K
Sbjct: 181 FKSHEGQIQSLDFHPHEFLLATGSADRTVK 210
>UNIPROTKB|E1C9D6 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:AADN02061119 IPI:IPI00578429 RefSeq:XP_425517.3
ProteinModelPortal:E1C9D6 PRIDE:E1C9D6 Ensembl:ENSGALT00000023410
GeneID:427945 KEGG:gga:427945 Uniprot:E1C9D6
Length = 340
Score = 109 (43.4 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 30/104 (28%), Positives = 48/104 (46%)
Query: 15 FLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG 74
FL S+V ++G ++ LWD Q+K + F+ H SL +P +L IS
Sbjct: 151 FLDDNSIVTSSGDTT----CALWDIETGQQKTV---FLGHTGDCMSLAVSPDFKLFISGA 203
Query: 75 KKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD 118
+ D+R+ R F+ HES + + P+ E TG+ D
Sbjct: 204 CDATAKLWDVREGTCRQTFSGHESDINAICFFPNGEAICTGSDD 247
Score = 45 (20.9 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWS 150
V CL + TG+ D +K+W+
Sbjct: 315 VSCLGVTADGMAVATGSWDSFLKIWN 340
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 122 (48.0 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 26/90 (28%), Positives = 44/90 (48%)
Query: 33 NVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSR 92
N+ +WD +KK + + H +G + L F P + ++S G+ + V DL +
Sbjct: 124 NLKIWDI---RKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHE 180
Query: 93 FNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
F +HE ++ L PHE TG+ D +K
Sbjct: 181 FKSHEGKIQSLDFHPHEFLLATGSADKTVK 210
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 88 (36.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 32/119 (26%), Positives = 51/119 (42%)
Query: 6 HNKITSDFVFLGSCS--LVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVF 63
H+ S V LG + L+AT G + V +W P V + H SL
Sbjct: 19 HSSNVSSLV-LGKSTGRLLATGG---DDCRVNVWSVNKPN---CVMSLTGHTTPIESLQI 71
Query: 64 APQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
+ + +L+++ + G I V DL I H++ + L P+ F +G+ D DIK
Sbjct: 72 SAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIK 130
Score = 84 (34.6 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 23/79 (29%), Positives = 36/79 (45%)
Query: 48 VQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL----RQRVIRSRFNAHESPVKCL 103
+Q V H SSLV L++ G GD C +++ + + S H +P++ L
Sbjct: 13 LQEIVAHSSNVSSLVLGKSTGRLLATG--GDDCRVNVWSVNKPNCVMS-LTGHTTPIESL 69
Query: 104 AIDPHEEFFVTGAGDGDIK 122
I EE V G+ G I+
Sbjct: 70 QISAKEELIVAGSQSGSIR 88
Score = 74 (31.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEH 164
V+CL P ++ + A D +K+W L+ +++ F G +
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHY 189
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 88 (36.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 32/119 (26%), Positives = 51/119 (42%)
Query: 6 HNKITSDFVFLGSCS--LVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVF 63
H+ S V LG + L+AT G + V +W P V + H SL
Sbjct: 19 HSSNVSSLV-LGKSTGRLLATGG---DDCRVNVWSVNKPN---CVMSLTGHTTPIESLQI 71
Query: 64 APQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
+ + +L+++ + G I V DL I H++ + L P+ F +G+ D DIK
Sbjct: 72 SAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIK 130
Score = 84 (34.6 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 23/79 (29%), Positives = 36/79 (45%)
Query: 48 VQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL----RQRVIRSRFNAHESPVKCL 103
+Q V H SSLV L++ G GD C +++ + + S H +P++ L
Sbjct: 13 LQEIVAHSSNVSSLVLGKSTGRLLATG--GDDCRVNVWSVNKPNCVMS-LTGHTTPIESL 69
Query: 104 AIDPHEEFFVTGAGDGDIK 122
I EE V G+ G I+
Sbjct: 70 QISAKEELIVAGSQSGSIR 88
Score = 74 (31.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEH 164
V+CL P ++ + A D +K+W L+ +++ F G +
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHY 189
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 85 (35.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 25/79 (31%), Positives = 37/79 (46%)
Query: 48 VQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL----RQRVIRSRFNAHESPVKCL 103
+Q V H SSLV L++ G GD C ++L + I S H SPV+ +
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATG--GDDCRVNLWSINKPNCIMS-LTGHTSPVESV 69
Query: 104 AIDPHEEFFVTGAGDGDIK 122
++ EE V G+ G I+
Sbjct: 70 RLNTPEELIVAGSQSGSIR 88
Score = 76 (31.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPG 162
V+CL P ++ + A D +K+W L+ ++ FPG
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 102 (41.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 28/94 (29%), Positives = 45/94 (47%)
Query: 29 SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRV 88
S S ++ LWD L K L + + H SSL F P + L S +I + D+R++
Sbjct: 82 SLSGSLRLWD--LEAAKIL-RTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKG 138
Query: 89 IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
R+ H V+CLA P ++ + + D +K
Sbjct: 139 CVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVK 172
Score = 58 (25.5 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 15/54 (27%), Positives = 25/54 (46%)
Query: 123 SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHA--RSSFFKHIG 174
S V + P+E +G+ D +K+W L +++ + GE RS F G
Sbjct: 190 SAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDG 243
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 99 (39.9 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 30/121 (24%), Positives = 50/121 (41%)
Query: 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSL 61
T H+ F L+A+ + + + LWDS + L+Q F H S+
Sbjct: 787 TLDGHSGTVESLAFSPDGKLLASGSYDN---TIDLWDSATGE---LLQTFEGHPHSIWSV 840
Query: 62 VFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121
FAP + L SA I + DL ++ ++H V+ +A P + + + D I
Sbjct: 841 AFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTI 900
Query: 122 K 122
K
Sbjct: 901 K 901
Score = 67 (28.6 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARS 167
++ +A P + V+G+ D IK+W L+ + L + +H+RS
Sbjct: 1005 IRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLE-DHSRS 1046
>WB|WBGene00017435 [details] [associations]
symbol:F13H8.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006898 GO:GO:0040010 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD EMBL:FO080709 RefSeq:NP_495256.1
ProteinModelPortal:Q19433 SMR:Q19433 DIP:DIP-25827N
MINT:MINT-1128581 STRING:Q19433 PaxDb:Q19433 EnsemblMetazoa:F13H8.2
GeneID:174038 KEGG:cel:CELE_F13H8.2 UCSC:F13H8.2 CTD:174038
WormBase:F13H8.2 InParanoid:Q19433 NextBio:882237 Uniprot:Q19433
Length = 929
Score = 88 (36.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 31/90 (34%), Positives = 41/90 (45%)
Query: 110 EFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSF 169
+FFV+ G PV C+ I P + VTG+ D +KVW L +F H SF
Sbjct: 577 KFFVSLYGHS---LPVTCVDIAPSSKLCVTGSVDKSVKVWGL-------DFGDCH--KSF 624
Query: 170 FKHIGQGVTQLHVDGGSRLF-SCGADGSMK 198
H + L G +LF S G DG +K
Sbjct: 625 HAHDDAVTSVLFCPGEEQLFWSAGKDGKIK 654
Score = 76 (31.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 25/108 (23%), Positives = 44/108 (40%)
Query: 18 SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLV---FAPQHQLLISAG 74
S SL+A+ G V +W + +L + D +V F P +++ G
Sbjct: 420 SSSLLASGG----GNEVIVWST-----HSLRSSLTLTDNDIKDIVAVNFVPGDNYILTGG 470
Query: 75 KKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
K G+I V +L + AH + + P E F+T + D ++
Sbjct: 471 KNGEIGVFELSSAELVETRKAHTGAIWTIQNSPDNEGFITASADKTVR 518
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 85 (35.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 25/79 (31%), Positives = 37/79 (46%)
Query: 48 VQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL----RQRVIRSRFNAHESPVKCL 103
+Q V H SSLV L++ G GD C ++L + I S H SPV+ +
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATG--GDDCRVNLWSINKPNCIMS-LTGHTSPVESV 69
Query: 104 AIDPHEEFFVTGAGDGDIK 122
++ EE V G+ G I+
Sbjct: 70 RLNTPEELIVAGSQSGSIR 88
Score = 76 (31.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPG 162
V+CL P ++ + A D +K+W L+ ++ FPG
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 85 (35.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 25/79 (31%), Positives = 37/79 (46%)
Query: 48 VQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL----RQRVIRSRFNAHESPVKCL 103
+Q V H SSLV L++ G GD C ++L + I S H SPV+ +
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATG--GDDCRVNLWSINKPNCIMS-LTGHTSPVESV 69
Query: 104 AIDPHEEFFVTGAGDGDIK 122
++ EE V G+ G I+
Sbjct: 70 RLNTPEELIVAGSQSGSIR 88
Score = 76 (31.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPG 162
V+CL P ++ + A D +K+W L+ ++ FPG
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 85 (35.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 25/79 (31%), Positives = 37/79 (46%)
Query: 48 VQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL----RQRVIRSRFNAHESPVKCL 103
+Q V H SSLV L++ G GD C ++L + I S H SPV+ +
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATG--GDDCRVNLWSINKPNCIMS-LTGHTSPVESV 69
Query: 104 AIDPHEEFFVTGAGDGDIK 122
++ EE V G+ G I+
Sbjct: 70 RLNTPEELIVAGSQSGSIR 88
Score = 76 (31.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPG 162
V+CL P ++ + A D +K+W L+ ++ FPG
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 116 (45.9 bits), Expect = 0.00020, P = 0.00020
Identities = 31/86 (36%), Positives = 43/86 (50%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG 184
V+C+A++P E+F TGAGD IK+W L+ L + G H S + G V+ H
Sbjct: 175 VRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTG-HV--STVR--GVAVSTKH--- 226
Query: 185 GSRLFSCGADGSMKVRQLPDRDAVVH 210
LFSCG D +K L + H
Sbjct: 227 -PYLFSCGEDRQVKCWDLEYNKVIRH 251
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 85 (35.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 25/79 (31%), Positives = 37/79 (46%)
Query: 48 VQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL----RQRVIRSRFNAHESPVKCL 103
+Q V H SSLV L++ G GD C ++L + I S H SPV+ +
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATG--GDDCRVNLWSINKPNCIMS-LTGHTSPVESV 69
Query: 104 AIDPHEEFFVTGAGDGDIK 122
++ EE V G+ G I+
Sbjct: 70 RLNTPEELIVAGSQSGSIR 88
Score = 76 (31.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPG 162
V+CL P ++ + A D +K+W L+ ++ FPG
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 85 (35.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 25/79 (31%), Positives = 37/79 (46%)
Query: 48 VQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL----RQRVIRSRFNAHESPVKCL 103
+Q V H SSLV L++ G GD C ++L + I S H SPV+ +
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATG--GDDCRVNLWSINKPNCIMS-LTGHTSPVESV 69
Query: 104 AIDPHEEFFVTGAGDGDIK 122
++ EE V G+ G I+
Sbjct: 70 RLNTPEELIVAGSQSGSIR 88
Score = 76 (31.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPG 162
V+CL P ++ + A D +K+W L+ ++ FPG
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
>UNIPROTKB|B3KVK2 [details] [associations]
symbol:GNB1 "cDNA FLJ16663 fis, clone THYMU2005759, highly
similar to Guanine nucleotide-binding proteinG(I)/G(S)/G(T) subunit
beta 1" species:9606 "Homo sapiens" [GO:0001917 "photoreceptor
inner segment" evidence=IEA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IEA] [GO:0007200 "phospholipase C-activating
G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0007204 "elevation of cytosolic calcium ion concentration"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0010659 "cardiac muscle cell apoptotic process" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0042622 "photoreceptor
outer segment membrane" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 GO:GO:0001750
EMBL:AL109917 EMBL:AL031282 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 UniGene:Hs.430425 HGNC:HGNC:4396 ChiTaRS:GNB1
EMBL:AK122949 IPI:IPI00642117 ProteinModelPortal:B3KVK2 SMR:B3KVK2
STRING:B3KVK2 PRIDE:B3KVK2 Ensembl:ENST00000455156
OrthoDB:EOG4GHZR3 ArrayExpress:B3KVK2 Bgee:B3KVK2 Uniprot:B3KVK2
Length = 240
Score = 100 (40.3 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 28/104 (26%), Positives = 44/104 (42%)
Query: 15 FLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG 74
FL +V ++G ++ LWD Q+ F H SL AP +L +S
Sbjct: 51 FLDDNQIVTSSGDTT----CALWDIETGQQTT---TFTGHTGDVMSLSLAPDTRLFVSGA 103
Query: 75 KKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD 118
+ D+R+ + R F HES + + P+ F TG+ D
Sbjct: 104 CDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDD 147
Score = 45 (20.9 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWS 150
V CL + TG+ D +K+W+
Sbjct: 215 VSCLGVTDDGMAVATGSWDSFLKIWN 240
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 88 (36.0 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 32/119 (26%), Positives = 51/119 (42%)
Query: 6 HNKITSDFVFLGSCS--LVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVF 63
H+ S V LG + L+AT G + V +W P V + H SL
Sbjct: 19 HSSNVSSLV-LGKSTGRLLATGG---DDCRVNVWSVNKPN---CVMSLTGHTTPIESLQI 71
Query: 64 APQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
+ + +L+++ + G I V DL I H++ + L P+ F +G+ D DIK
Sbjct: 72 SAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIK 130
Score = 84 (34.6 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 23/79 (29%), Positives = 36/79 (45%)
Query: 48 VQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL----RQRVIRSRFNAHESPVKCL 103
+Q V H SSLV L++ G GD C +++ + + S H +P++ L
Sbjct: 13 LQEIVAHSSNVSSLVLGKSTGRLLATG--GDDCRVNVWSVNKPNCVMS-LTGHTTPIESL 69
Query: 104 AIDPHEEFFVTGAGDGDIK 122
I EE V G+ G I+
Sbjct: 70 QISAKEELIVAGSQSGSIR 88
Score = 72 (30.4 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPG 162
V+CL P ++ + A D +K+W L+ +++ F G
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTG 187
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 117 (46.2 bits), Expect = 0.00024, P = 0.00024
Identities = 40/149 (26%), Positives = 65/149 (43%)
Query: 20 SLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDI 79
SL+ + G + N+ +WD+ Q + H S + + ++SA +
Sbjct: 264 SLIVSGG---KDNNIKIWDAKSSQNITTLHG---HKSTVSKVEWNQNGNWIVSASSDQLL 317
Query: 80 CVIDLRQRVIRSRFNAHESPVKCLAIDP-HEEFFVTGAGDGDIKSPVKCLAIDPHEEFFV 138
V D+R F H V LA+ P HE+ FV+G DG I + + +P + +
Sbjct: 318 KVFDIRTMKEMQTFKGHGKEVTALALHPYHEDLFVSGDKDGKI---LYWIVGNPEPQAEI 374
Query: 139 TGAGDGDIKVWSLSGN---HLLYNFPGEH 164
A D D VWSLS + H+L + +H
Sbjct: 375 HSAHDAD--VWSLSWHPIGHILASGSNDH 401
>MGI|MGI:95785 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein),
beta 3" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0043005 "neuron projection" evidence=ISO] [GO:0044297 "cell
body" evidence=ISO] [GO:0051020 "GTPase binding" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95785 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
EMBL:AC002397 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784
KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C EMBL:AK014789 EMBL:BC018239
EMBL:U38494 IPI:IPI00116938 RefSeq:NP_038558.1 UniGene:Mm.68889
ProteinModelPortal:Q61011 SMR:Q61011 STRING:Q61011
PhosphoSite:Q61011 PaxDb:Q61011 PRIDE:Q61011
Ensembl:ENSMUST00000024206 GeneID:14695 KEGG:mmu:14695
InParanoid:Q61011 NextBio:286643 Bgee:Q61011 Genevestigator:Q61011
GermOnline:ENSMUSG00000023439 Uniprot:Q61011
Length = 340
Score = 113 (44.8 bits), Expect = 0.00026, P = 0.00026
Identities = 30/108 (27%), Positives = 49/108 (45%)
Query: 15 FLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG 74
FL ++V ++G ++ LWD Q+K + FV H SL +P ++L IS
Sbjct: 151 FLDDNNIVTSSGDTT----CALWDIETGQQKTV---FVGHTGDCMSLAVSPDYKLFISGA 203
Query: 75 KKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
+ D+R+ R F HES + + P+ E TG+ D +
Sbjct: 204 CDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCR 251
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 85 (35.0 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 22/77 (28%), Positives = 35/77 (45%)
Query: 48 VQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQ--RVIRSRFNAHESPVKCLAI 105
+Q V H SSLV L++ G GD C +++ ++ H +P++ L I
Sbjct: 13 LQEIVAHSSNVSSLVLGKSTGRLLATG--GDDCRVNVWSVAQLRHDLLTGHTTPIESLQI 70
Query: 106 DPHEEFFVTGAGDGDIK 122
EE V G+ G I+
Sbjct: 71 SAKEELIVAGSQSGSIR 87
Score = 82 (33.9 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 32/119 (26%), Positives = 53/119 (44%)
Query: 6 HNKITSDFVFLGSCS--LVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVF 63
H+ S V LG + L+AT G + V +W S+ + L+ H SL
Sbjct: 19 HSSNVSSLV-LGKSTGRLLATGG---DDCRVNVW-SVAQLRHDLLTG---HTTPIESLQI 70
Query: 64 APQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
+ + +L+++ + G I V DL I H++ + L P+ F +G+ D DIK
Sbjct: 71 SAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIK 129
Score = 74 (31.1 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEH 164
V+CL P ++ + A D +K+W L+ +++ F G +
Sbjct: 149 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHY 188
>UNIPROTKB|F1NC11 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:AADN02037856
EMBL:AADN02037857 EMBL:AADN02037858 EMBL:AADN02037859
EMBL:AADN02037860 IPI:IPI00583802 Ensembl:ENSGALT00000023879
Uniprot:F1NC11
Length = 938
Score = 91 (37.1 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 26/95 (27%), Positives = 44/95 (46%)
Query: 28 SSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR 87
S +++V +W+ Q ++ C + SL F P + +I K G + + DL
Sbjct: 427 SGAAESVKIWNRSTLQ---CIRTMDC-EYALCSL-FVPGDRQVIVGTKTGKLQLYDLASG 481
Query: 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
+ NAH+ V +A+ P + FVTG D +K
Sbjct: 482 TLMETLNAHDGAVWSIALSPDQRGFVTGGADKCVK 516
Score = 70 (29.7 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 32/102 (31%), Positives = 45/102 (44%)
Query: 110 EFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSF 169
+FF++ G K PV C+ I TG+ D ++K+W L +F G+ RS
Sbjct: 577 KFFLSLYGH---KLPVLCMDISYDGALIATGSADRNVKIWGL-------DF-GDCHRS-L 624
Query: 170 FKHIGQGVTQLHVDGGSRLF-SCGADGSMKVRQLPDRDAVVH 210
F H V L S LF + G D K++Q D D H
Sbjct: 625 FAH-DDSVMYLQFVAKSHLFFTAGKDN--KIKQW-DADKFEH 662
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 115 (45.5 bits), Expect = 0.00038, P = 0.00038
Identities = 35/126 (27%), Positives = 62/126 (49%)
Query: 60 SLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD- 118
++ F+P + L++ + I + DL + +R F+ HE + L + F V+G+GD
Sbjct: 365 TIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDR 424
Query: 119 ---------G------DIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGE 163
G +I++ V +AI P+++F G+ D I+VWS+SG L+ G
Sbjct: 425 TARLWDVETGQCILKLEIENGVTAIAISPNDQFIAVGSLDQIIRVWSVSGT-LVERLEG- 482
Query: 164 HARSSF 169
H S +
Sbjct: 483 HKESVY 488
>ASPGD|ASPL0000058626 [details] [associations]
symbol:AN1208 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 EMBL:AACD01000017
GO:GO:0007049 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_658812.1
ProteinModelPortal:Q5BE22 STRING:Q5BE22
EnsemblFungi:CADANIAT00001416 GeneID:2876986 KEGG:ani:AN1208.2
OMA:KSEEHAR OrthoDB:EOG4QZBVP Uniprot:Q5BE22
Length = 452
Score = 113 (44.8 bits), Expect = 0.00041, P = 0.00041
Identities = 52/188 (27%), Positives = 76/188 (40%)
Query: 30 ESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVI 89
E K V WD L K +++ + H G +L P+ LL++ G+ G V D+R R
Sbjct: 205 EDKMVKCWD--LETNK-VIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARVWDMRTRSN 261
Query: 90 RSRFNAHE---SPVKCLAIDPHEEFFVTGAGDGDI-----------------KSPVKCLA 129
+ H + V+C DP +TG+ D + K ++ LA
Sbjct: 262 IHVLSGHTGTVADVQCQEADPQ---VITGSLDATVRLWDLAAGKTMGVLTHHKKGIRSLA 318
Query: 130 IDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLF 189
P E F A G IK W G + NF G +A + L V+ + LF
Sbjct: 319 THPRE-FTFASASTGSIKQWKCPGGEFMQNFEGHNAI----------INTLSVNEDNVLF 367
Query: 190 SCGADGSM 197
S G +GSM
Sbjct: 368 SGGDNGSM 375
>TAIR|locus:2059856 [details] [associations]
symbol:MSI2 "AT2G16780" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0007067 "mitosis" evidence=RCA] [GO:0007129
"synapsis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0010564 "regulation of cell cycle process"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AC005825 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
ProtClustDB:CLSN2683757 EMBL:AF016847 EMBL:AY056814 IPI:IPI00526379
PIR:B84544 RefSeq:NP_179269.1 UniGene:At.25135
ProteinModelPortal:O22468 SMR:O22468 STRING:O22468 PaxDb:O22468
PRIDE:O22468 EnsemblPlants:AT2G16780.1 GeneID:816179
KEGG:ath:AT2G16780 GeneFarm:2815 TAIR:At2g16780 InParanoid:O22468
OMA:EVNYLSF PhylomeDB:O22468 Genevestigator:O22468
GermOnline:AT2G16780 Uniprot:O22468
Length = 415
Score = 110 (43.8 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 28/98 (28%), Positives = 50/98 (51%)
Query: 29 SESKNVCLWD-SLLPQKKALVQAFVC--HDQGASSLVFAPQHQLLI-SAGKKGDICVIDL 84
S+ + +CLWD S PQ K L FV H+ + + + +++ L SAG+ G + + D
Sbjct: 188 SQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFGSAGEDGRLVIWDT 247
Query: 85 RQRVIRSRFNAHESPVKCLAIDPHEEFFV-TGAGDGDI 121
R ++ + HE V L+ +P E+ + T + D +
Sbjct: 248 RTNQMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTV 285
Score = 38 (18.4 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 131 DPHEEFFVTGAG-DGDIKVWSLS 152
DP+ E + +G D + VW L+
Sbjct: 313 DPNHETVLASSGEDRRLMVWDLN 335
>MGI|MGI:2442895 [details] [associations]
symbol:Eml6 "echinoderm microtubule associated protein like
6" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2442895 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0005874 HSSP:P16649 InterPro:IPR005108
Pfam:PF03451 GeneTree:ENSGT00550000074369 HOGENOM:HOG000031037
OrthoDB:EOG4W3SM4 CTD:400954 OMA:HTAAAGI EMBL:AL929371
EMBL:AL731792 EMBL:BX005100 EMBL:AK049977 EMBL:AK081418
EMBL:BC024726 IPI:IPI00226736 RefSeq:NP_666128.2 UniGene:Mm.445271
ProteinModelPortal:Q5SQM0 SMR:Q5SQM0 PhosphoSite:Q5SQM0
PaxDb:Q5SQM0 PRIDE:Q5SQM0 Ensembl:ENSMUST00000058902 GeneID:237711
KEGG:mmu:237711 UCSC:uc007ihq.1 InParanoid:Q8C4R3 NextBio:383444
Bgee:Q5SQM0 CleanEx:MM_C230094A16RIK Genevestigator:Q5SQM0
Uniprot:Q5SQM0
Length = 1958
Score = 87 (35.7 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 26/110 (23%), Positives = 48/110 (43%)
Query: 20 SLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG--KKG 77
+L+AT G + +C+W+S ++++ H G + L F Q L S G K
Sbjct: 74 TLIAT-GQVGKEPYICIWNSYNVHTVSILKDV--HTHGVACLAFDSDGQHLASVGLDAKN 130
Query: 78 DICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKC 127
+C+ D R+ + + H + ++ DP++ + G IK C
Sbjct: 131 TVCIWDWRKGKLLASATGHSDRIFDISWDPYQPNRMVSCGVKHIKFWTLC 180
Score = 80 (33.2 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 27/95 (28%), Positives = 46/95 (48%)
Query: 119 GDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHA-RSSFFKHIGQGV 177
G + + LA+ P + VTG+ D +++WSL+ + L+ E A RS F G +
Sbjct: 322 GHCEGELWALALHPKKPLAVTGSDDRSVRLWSLADHALIARCNMEEAVRSVSFSPDGSQL 381
Query: 178 TQLHVDGGSRLFSCGADGSMKVRQLPDRDAVVHTL 212
L + GS + D + +V + DR V+H +
Sbjct: 382 A-LGMKDGSFIVLRVRDMT-EVVHIKDRKEVIHEM 414
>UNIPROTKB|B3KPU1 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246 EMBL:AC009488
HOGENOM:HOG000176356 HOVERGEN:HBG000188 UniGene:Hs.185172
HGNC:HGNC:4398 EMBL:AK056750 IPI:IPI00924758 SMR:B3KPU1
STRING:B3KPU1 Ensembl:ENST00000419828 Ensembl:ENST00000427895
Uniprot:B3KPU1
Length = 240
Score = 97 (39.2 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 27/91 (29%), Positives = 37/91 (40%)
Query: 28 SSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR 87
SS LWD Q+ F H SL AP + +S I + D+R
Sbjct: 60 SSGDTTCALWDIETGQQTV---GFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDS 116
Query: 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGD 118
+ R F HES + +A P+ F TG+ D
Sbjct: 117 MCRQTFIGHESDINAVAFFPNGYAFTTGSDD 147
Score = 45 (20.9 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWS 150
V CL + TG+ D +K+W+
Sbjct: 215 VSCLGVTDDGMAVATGSWDSFLKIWN 240
>UNIPROTKB|F1P8Q5 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:AAEX03015272
ProteinModelPortal:F1P8Q5 Ensembl:ENSCAFT00000023270 Uniprot:F1P8Q5
Length = 340
Score = 110 (43.8 bits), Expect = 0.00058, P = 0.00058
Identities = 30/108 (27%), Positives = 48/108 (44%)
Query: 15 FLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG 74
FL ++V ++G ++ LWD Q+K + FV H SL +P +L IS
Sbjct: 151 FLDDNNIVTSSGDTT----CALWDIETGQQKTV---FVGHTGDCMSLAVSPDFKLFISGA 203
Query: 75 KKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
+ D+R+ R F HES + + P+ E TG+ D +
Sbjct: 204 CDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCR 251
>UNIPROTKB|P79147 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U52916 EMBL:AY751537 EMBL:DQ672621
RefSeq:NP_001003004.1 UniGene:Cfa.5 ProteinModelPortal:P79147
SMR:P79147 PRIDE:P79147 GeneID:403511 KEGG:cfa:403511 CTD:2784
eggNOG:NOG269251 KO:K07825 NextBio:20817024 Uniprot:P79147
Length = 340
Score = 110 (43.8 bits), Expect = 0.00058, P = 0.00058
Identities = 30/108 (27%), Positives = 48/108 (44%)
Query: 15 FLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG 74
FL ++V ++G ++ LWD Q+K + FV H SL +P +L IS
Sbjct: 151 FLDDNNIVTSSGDTT----CALWDIETGQQKTV---FVGHTGDCMSLAVSPDFKLFISGA 203
Query: 75 KKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
+ D+R+ R F HES + + P+ E TG+ D +
Sbjct: 204 CDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCR 251
>UNIPROTKB|F1SLU8 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:FP325257
Ensembl:ENSSSCT00000000743 Uniprot:F1SLU8
Length = 340
Score = 110 (43.8 bits), Expect = 0.00058, P = 0.00058
Identities = 30/108 (27%), Positives = 48/108 (44%)
Query: 15 FLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG 74
FL ++V ++G ++ LWD Q+K + FV H SL +P +L IS
Sbjct: 151 FLDDNNIVTSSGDTT----CALWDIETGQQKTV---FVGHTGDCMSLAVSPDFKLFISGA 203
Query: 75 KKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
+ D+R+ R F HES + + P+ E TG+ D +
Sbjct: 204 CDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCR 251
>ZFIN|ZDB-GENE-040426-2855 [details] [associations]
symbol:gnb1b "guanine nucleotide binding protein
(G protein), beta polypeptide 1b" species:7955 "Danio rerio"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-040426-2855 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU207276 EMBL:CR854824 EMBL:BC044482
EMBL:BC152684 IPI:IPI00483806 RefSeq:NP_998646.1
RefSeq:XP_003198887.1 UniGene:Dr.26330 SMR:Q803H5 STRING:Q803H5
Ensembl:ENSDART00000015309 Ensembl:ENSDART00000084989
Ensembl:ENSDART00000136035 GeneID:100537780 GeneID:406796
KEGG:dre:100537780 KEGG:dre:406796 CTD:406796 InParanoid:Q803H5
NextBio:20818306 Uniprot:Q803H5
Length = 340
Score = 101 (40.6 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 28/104 (26%), Positives = 44/104 (42%)
Query: 15 FLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG 74
FL +V ++G ++ LWD Q+ F H SL AP +L +S
Sbjct: 151 FLDDNQIVTSSGDTT----CALWDIETGQQTT---TFAGHTGDVMSLSLAPDTRLFVSGA 203
Query: 75 KKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD 118
+ D+R+ + R F HES + + P+ F TG+ D
Sbjct: 204 CDASAKLWDIREGMCRQTFTGHESDINAICFFPNGNAFATGSDD 247
Score = 45 (20.9 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWS 150
V CL + TG+ D +K+W+
Sbjct: 315 VSCLGVTDDGMAVATGSWDSFLKIWN 340
>UNIPROTKB|F1MNS4 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 IPI:IPI00711976 UniGene:Bt.20483 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 EMBL:DAAA02057306
ProteinModelPortal:F1MNS4 Ensembl:ENSBTAT00000027147 Uniprot:F1MNS4
Length = 800
Score = 88 (36.0 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 24/82 (29%), Positives = 38/82 (46%)
Query: 127 CLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS 186
C+ P ++ T + DG IK+W+L L F G A S K V G+
Sbjct: 526 CVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDA--SVLK-------VAFVSRGT 576
Query: 187 RLFSCGADGSMKVRQLPDRDAV 208
+L S G+DG +K+ + + + V
Sbjct: 577 QLLSSGSDGLLKLWTIKNNECV 598
Score = 69 (29.3 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 28/94 (29%), Positives = 47/94 (50%)
Query: 28 SSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVI-DLRQ 86
S+ ++ +W SL Q+++ + H +SL F+ ++S+G+ ICVI DLR
Sbjct: 171 SAADTSIRVW-SL--QERSCLAVLTAHYSAVTSLTFSADGHTMLSSGRD-KICVIWDLRS 226
Query: 87 -RVIRSR--FNAHESPVKCLAIDPHEEFFVTGAG 117
+ R+ F + E+ V L +P E V AG
Sbjct: 227 LQATRTVPVFESVEAAV-LLPEEPAPELGVKSAG 259
>UNIPROTKB|Q2KJJ5 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 EMBL:BC105313
IPI:IPI00711976 RefSeq:NP_001040084.2 UniGene:Bt.20483
ProteinModelPortal:Q2KJJ5 STRING:Q2KJJ5 PRIDE:Q2KJJ5 GeneID:618429
KEGG:bta:618429 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
InParanoid:Q2KJJ5 KO:K14555 OrthoDB:EOG42JNQR NextBio:20901180
Uniprot:Q2KJJ5
Length = 800
Score = 88 (36.0 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 24/82 (29%), Positives = 38/82 (46%)
Query: 127 CLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS 186
C+ P ++ T + DG IK+W+L L F G A S K V G+
Sbjct: 526 CVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDA--SVLK-------VAFVSRGT 576
Query: 187 RLFSCGADGSMKVRQLPDRDAV 208
+L S G+DG +K+ + + + V
Sbjct: 577 QLLSSGSDGLLKLWTIKNNECV 598
Score = 69 (29.3 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 28/94 (29%), Positives = 47/94 (50%)
Query: 28 SSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVI-DLRQ 86
S+ ++ +W SL Q+++ + H +SL F+ ++S+G+ ICVI DLR
Sbjct: 171 SAADTSIRVW-SL--QERSCLAVLTAHYSAVTSLTFSADGHTMLSSGRD-KICVIWDLRS 226
Query: 87 -RVIRSR--FNAHESPVKCLAIDPHEEFFVTGAG 117
+ R+ F + E+ V L +P E V AG
Sbjct: 227 LQATRTVPVFESVEAAV-LLPEEPAPELGVKSAG 259
>UNIPROTKB|P16520 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0043005
"neuron projection" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0003924 "GTPase activity" evidence=TAS] [GO:0008217 "regulation
of blood pressure" evidence=TAS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=TAS] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0006112 "energy reserve metabolic
process" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0071377 "cellular response to glucagon stimulus"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0006112 GO:GO:0004871 GO:GO:0008217 GO:GO:0071377
Pathway_Interaction_DB:cone_pathway EMBL:U47924 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 CTD:2784 KO:K07825 EMBL:M31328
EMBL:U47930 EMBL:Y12050 EMBL:Y12051 EMBL:Y12052 EMBL:Y12053
EMBL:Y12054 EMBL:Y12055 EMBL:Y12056 EMBL:Y12057 EMBL:Y12058
EMBL:AF501884 EMBL:BT009800 EMBL:AY631872 EMBL:BC000115
EMBL:BC002454 IPI:IPI00029143 PIR:A35096 RefSeq:NP_002066.1
UniGene:Hs.631657 ProteinModelPortal:P16520 SMR:P16520 DIP:DIP-601N
IntAct:P16520 STRING:P16520 PhosphoSite:P16520 DMDM:121011
OGP:P16520 PaxDb:P16520 PRIDE:P16520 DNASU:2784
Ensembl:ENST00000229264 GeneID:2784 KEGG:hsa:2784 UCSC:uc001qrc.3
GeneCards:GC12P007021 HGNC:HGNC:4400 HPA:HPA005645 MIM:139130
neXtProt:NX_P16520 PharmGKB:PA176 InParanoid:P16520 OMA:NMCSIYS
OrthoDB:EOG4J118C PhylomeDB:P16520 ChiTaRS:GNB3 GenomeRNAi:2784
NextBio:10967 ArrayExpress:P16520 Bgee:P16520 CleanEx:HS_GNB3
Genevestigator:P16520 GermOnline:ENSG00000111664 Uniprot:P16520
Length = 340
Score = 109 (43.4 bits), Expect = 0.00078, P = 0.00078
Identities = 30/108 (27%), Positives = 47/108 (43%)
Query: 15 FLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG 74
FL ++V ++G ++ LWD Q+K + FV H SL +P L IS
Sbjct: 151 FLDDNNIVTSSGDTT----CALWDIETGQQKTV---FVGHTGDCMSLAVSPDFNLFISGA 203
Query: 75 KKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
+ D+R+ R F HES + + P+ E TG+ D +
Sbjct: 204 CDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCR 251
>UNIPROTKB|P62871 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9913 "Bos taurus"
[GO:0071380 "cellular response to prostaglandin E stimulus"
evidence=IDA] [GO:0071870 "cellular response to catecholamine
stimulus" evidence=IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IDA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 EMBL:X03073
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0060041
GO:GO:0007200 GO:GO:0007191 GO:GO:0071870 GO:GO:0071380 PDB:1OMW
PDB:2BCJ PDB:3PSC PDB:3PVU PDB:3PVW PDB:3UZS PDBsum:1OMW
PDBsum:2BCJ PDBsum:3PSC PDBsum:3PVU PDBsum:3PVW PDBsum:3UZS
PDB:3CIK PDB:3KRW PDB:3KRX PDB:3V5W PDBsum:3CIK PDBsum:3KRW
PDBsum:3KRX PDBsum:3V5W GO:GO:0001750 PRINTS:PR00319 GO:GO:0050909
GO:GO:0005834 EMBL:M13236 EMBL:BC105260 IPI:IPI00703160 PIR:A24225
RefSeq:NP_786971.2 UniGene:Bt.57702 PDB:1A0R PDB:1B9X PDB:1B9Y
PDB:1GG2 PDB:1GOT PDB:1GP2 PDB:1TBG PDB:1XHM PDB:2TRC PDB:3AH8
PDBsum:1A0R PDBsum:1B9X PDBsum:1B9Y PDBsum:1GG2 PDBsum:1GOT
PDBsum:1GP2 PDBsum:1TBG PDBsum:1XHM PDBsum:2TRC PDBsum:3AH8
ProteinModelPortal:P62871 SMR:P62871 DIP:DIP-29227N IntAct:P62871
MINT:MINT-1864875 STRING:P62871 PRIDE:P62871
Ensembl:ENSBTAT00000000259 Ensembl:ENSBTAT00000045065 GeneID:281201
KEGG:bta:281201 CTD:2782 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InParanoid:P62871 KO:K04536
OMA:CMLWDIE OrthoDB:EOG4HX51D EvolutionaryTrace:P62871
NextBio:20805257 ArrayExpress:P62871 InterPro:IPR016346
PIRSF:PIRSF002394 Uniprot:P62871
Length = 340
Score = 100 (40.3 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 28/104 (26%), Positives = 44/104 (42%)
Query: 15 FLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG 74
FL +V ++G ++ LWD Q+ F H SL AP +L +S
Sbjct: 151 FLDDNQIVTSSGDTT----CALWDIETGQQTT---TFTGHTGDVMSLSLAPDTRLFVSGA 203
Query: 75 KKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD 118
+ D+R+ + R F HES + + P+ F TG+ D
Sbjct: 204 CDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDD 247
Score = 45 (20.9 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWS 150
V CL + TG+ D +K+W+
Sbjct: 315 VSCLGVTDDGMAVATGSWDSFLKIWN 340
>UNIPROTKB|P62872 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9615 "Canis lupus
familiaris" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:Z75134
RefSeq:NP_001003236.1 UniGene:Cfa.3773 ProteinModelPortal:P62872
SMR:P62872 STRING:P62872 PRIDE:P62872 Ensembl:ENSCAFT00000030502
Ensembl:ENSCAFT00000035727 GeneID:403912 KEGG:cfa:403912
InParanoid:P62872 NextBio:20817404 Uniprot:P62872
Length = 340
Score = 100 (40.3 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 28/104 (26%), Positives = 44/104 (42%)
Query: 15 FLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG 74
FL +V ++G ++ LWD Q+ F H SL AP +L +S
Sbjct: 151 FLDDNQIVTSSGDTT----CALWDIETGQQTT---TFTGHTGDVMSLSLAPDTRLFVSGA 203
Query: 75 KKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD 118
+ D+R+ + R F HES + + P+ F TG+ D
Sbjct: 204 CDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDD 247
Score = 45 (20.9 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWS 150
V CL + TG+ D +K+W+
Sbjct: 315 VSCLGVTDDGMAVATGSWDSFLKIWN 340
>UNIPROTKB|P62873 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0001917
"photoreceptor inner segment" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA] [GO:0044297
"cell body" evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0007213
"G-protein coupled acetylcholine receptor signaling pathway"
evidence=TAS] [GO:0007265 "Ras protein signal transduction"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0006112 "energy
reserve metabolic process" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0030168 "platelet activation" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=ISS] [GO:0071380 "cellular response to
prostaglandin E stimulus" evidence=ISS] [GO:0071870 "cellular
response to catecholamine stimulus" evidence=ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007265 GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006112 GO:GO:0004871 EMBL:CH471183 GO:GO:0060041
GO:GO:0007204 GO:GO:0007213 GO:GO:0007200
Pathway_Interaction_DB:lysophospholipid_pathway GO:GO:0071377
GO:GO:0007191 GO:GO:0071870 GO:GO:0071380
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:er_nongenomic_pathway
Pathway_Interaction_DB:txa2pathway GO:GO:0001750
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
EMBL:AL109917 EMBL:AL031282
Pathway_Interaction_DB:wnt_calcium_pathway GO:GO:0050909
GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X04526 EMBL:AF501882 EMBL:BT007305
EMBL:CR456784 EMBL:BC004186 EMBL:BC005888 EMBL:BC008991 EMBL:M36430
IPI:IPI00026268 PIR:A24853 RefSeq:NP_002065.1 UniGene:Hs.430425
ProteinModelPortal:P62873 SMR:P62873 DIP:DIP-599N IntAct:P62873
MINT:MINT-94562 STRING:P62873 PhosphoSite:P62873 DMDM:51317302
OGP:P62873 REPRODUCTION-2DPAGE:IPI00026268 PaxDb:P62873
PRIDE:P62873 DNASU:2782 Ensembl:ENST00000378606
Ensembl:ENST00000378609 GeneID:2782 KEGG:hsa:2782 UCSC:uc001aif.3
GeneCards:GC01M001748 HGNC:HGNC:4396 HPA:HPA040736 MIM:139380
neXtProt:NX_P62873 PharmGKB:PA28776 InParanoid:P62873
PhylomeDB:P62873 ChiTaRS:GNB1 EvolutionaryTrace:P62873
GenomeRNAi:2782 NextBio:10959 ArrayExpress:P62873 Bgee:P62873
CleanEx:HS_GNB1 Genevestigator:P62873 GermOnline:ENSG00000078369
Uniprot:P62873
Length = 340
Score = 100 (40.3 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 28/104 (26%), Positives = 44/104 (42%)
Query: 15 FLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG 74
FL +V ++G ++ LWD Q+ F H SL AP +L +S
Sbjct: 151 FLDDNQIVTSSGDTT----CALWDIETGQQTT---TFTGHTGDVMSLSLAPDTRLFVSGA 203
Query: 75 KKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD 118
+ D+R+ + R F HES + + P+ F TG+ D
Sbjct: 204 CDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDD 247
Score = 45 (20.9 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWS 150
V CL + TG+ D +K+W+
Sbjct: 315 VSCLGVTDDGMAVATGSWDSFLKIWN 340
>MGI|MGI:95781 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein),
beta 1" species:10090 "Mus musculus" [GO:0001664 "G-protein coupled
receptor binding" evidence=ISO] [GO:0001750 "photoreceptor outer
segment" evidence=IDA] [GO:0001917 "photoreceptor inner segment"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISO;ISA;IPI]
[GO:0006184 "GTP catabolic process" evidence=ISO;ISA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISO;IDA;TAS] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IDA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=ISO] [GO:0007603 "phototransduction,
visible light" evidence=ISA] [GO:0008283 "cell proliferation"
evidence=IDA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031702
"type 1 angiotensin receptor binding" evidence=ISO] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISO] [GO:0044297
"cell body" evidence=ISO] [GO:0050909 "sensory perception of taste"
evidence=IDA] [GO:0051020 "GTPase binding" evidence=ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95781 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456
GO:GO:0007603 GO:GO:0004871 GO:GO:0060041 GO:GO:0007204
GO:GO:0007200 GO:GO:0010659 GO:GO:0001750 PRINTS:PR00319
GO:GO:0050909 GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 ChiTaRS:GNB1 EMBL:U29055
EMBL:AB042854 EMBL:BC013058 IPI:IPI00120716 PIR:JC5057
RefSeq:NP_001153488.1 RefSeq:NP_001153489.1 RefSeq:NP_032168.1
UniGene:Mm.2344 ProteinModelPortal:P62874 SMR:P62874 IntAct:P62874
STRING:P62874 PhosphoSite:P62874 PaxDb:P62874 PRIDE:P62874
Ensembl:ENSMUST00000030940 Ensembl:ENSMUST00000105616
Ensembl:ENSMUST00000165335 Ensembl:ENSMUST00000176637 GeneID:14688
KEGG:mmu:14688 InParanoid:P62874 NextBio:286631 Bgee:P62874
Genevestigator:P62874 Uniprot:P62874
Length = 340
Score = 100 (40.3 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 28/104 (26%), Positives = 44/104 (42%)
Query: 15 FLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG 74
FL +V ++G ++ LWD Q+ F H SL AP +L +S
Sbjct: 151 FLDDNQIVTSSGDTT----CALWDIETGQQTT---TFTGHTGDVMSLSLAPDTRLFVSGA 203
Query: 75 KKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD 118
+ D+R+ + R F HES + + P+ F TG+ D
Sbjct: 204 CDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDD 247
Score = 45 (20.9 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWS 150
V CL + TG+ D +K+W+
Sbjct: 315 VSCLGVTDDGMAVATGSWDSFLKIWN 340
>RGD|2718 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein), beta
polypeptide 1" species:10116 "Rattus norvegicus" [GO:0001750
"photoreceptor outer segment" evidence=ISO] [GO:0001917
"photoreceptor inner segment" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISO;IDA;TAS] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISO;IMP;TAS] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA;ISO] [GO:0007204 "elevation of cytosolic calcium ion
concentration" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IDA] [GO:0044297
"cell body" evidence=IDA] [GO:0050909 "sensory perception of taste"
evidence=IEA;ISO] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IEA;ISO]
[GO:0071456 "cellular response to hypoxia" evidence=IDA] [GO:0001664
"G-protein coupled receptor binding" evidence=IMP] [GO:0031702 "type
1 angiotensin receptor binding" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:2718
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008283 GO:GO:0030425 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456 GO:GO:0007186
GO:GO:0004871 GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 PDB:3SN6
PDBsum:3SN6 GO:GO:0001917 GO:GO:0010659 GO:GO:0044297 PRINTS:PR00319
GO:GO:0042622 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U34958 EMBL:U88324 EMBL:AY552805 EMBL:BC078809
IPI:IPI00212655 RefSeq:NP_112249.2 UniGene:Rn.126047
ProteinModelPortal:P54311 SMR:P54311 DIP:DIP-37029N IntAct:P54311
MINT:MINT-1795773 STRING:P54311 PhosphoSite:P54311 PRIDE:P54311
Ensembl:ENSRNOT00000041789 GeneID:24400 KEGG:rno:24400
InParanoid:P54311 EvolutionaryTrace:P54311 NextBio:603199
ArrayExpress:P54311 Genevestigator:P54311
GermOnline:ENSRNOG00000016638 Uniprot:P54311
Length = 340
Score = 100 (40.3 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 28/104 (26%), Positives = 44/104 (42%)
Query: 15 FLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG 74
FL +V ++G ++ LWD Q+ F H SL AP +L +S
Sbjct: 151 FLDDNQIVTSSGDTT----CALWDIETGQQTT---TFTGHTGDVMSLSLAPDTRLFVSGA 203
Query: 75 KKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD 118
+ D+R+ + R F HES + + P+ F TG+ D
Sbjct: 204 CDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDD 247
Score = 45 (20.9 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWS 150
V CL + TG+ D +K+W+
Sbjct: 315 VSCLGVTDDGMAVATGSWDSFLKIWN 340
>ZFIN|ZDB-GENE-030131-823 [details] [associations]
symbol:gnb1a "guanine nucleotide binding protein (G
protein), beta polypeptide 1a" species:7955 "Danio rerio"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-030131-823 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC056708 EMBL:BC071277 IPI:IPI00506088
RefSeq:NP_997774.1 UniGene:Dr.75526 ProteinModelPortal:Q6PH57
SMR:Q6PH57 STRING:Q6PH57 PRIDE:Q6PH57 Ensembl:ENSDART00000130104
GeneID:322104 KEGG:dre:322104 CTD:322104 InParanoid:Q6PH57
NextBio:20807673 Bgee:Q6PH57 Uniprot:Q6PH57
Length = 340
Score = 100 (40.3 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 28/104 (26%), Positives = 44/104 (42%)
Query: 15 FLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG 74
FL +V ++G ++ LWD Q+ F H SL AP +L +S
Sbjct: 151 FLDDNQIVTSSGDTT----CALWDIETGQQTT---TFAGHTGDVMSLSLAPDTRLFVSGA 203
Query: 75 KKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD 118
+ D+R+ + R F HES + + P+ F TG+ D
Sbjct: 204 CDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDD 247
Score = 45 (20.9 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWS 150
V CL + TG+ D +K+W+
Sbjct: 315 VSCLGVTDDGMAVATGSWDSFLKIWN 340
>WB|WBGene00001510 [details] [associations]
symbol:fzr-1 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0007126 "meiosis" evidence=IMP] [GO:0007067 "mitosis"
evidence=IMP] [GO:0007276 "gamete generation" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009792 GO:GO:0007126 GO:GO:0018991 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR024977 Pfam:PF12894
GO:GO:0007276 EMBL:Z47358 KO:K03364 GeneTree:ENSGT00580000081606
PIR:T27730 RefSeq:NP_496075.1 ProteinModelPortal:Q09649 SMR:Q09649
STRING:Q09649 PaxDb:Q09649 EnsemblMetazoa:ZK1307.6 GeneID:174516
KEGG:cel:CELE_ZK1307.6 UCSC:ZK1307.6 CTD:174516 WormBase:ZK1307.6
InParanoid:Q09649 OMA:QIWDVTT NextBio:884360 Uniprot:Q09649
Length = 702
Score = 95 (38.5 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 23/68 (33%), Positives = 31/68 (45%)
Query: 54 HDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEE-FF 112
H Q L ++P QLL S G + V +LR+ + H + VK LA PH
Sbjct: 521 HRQEVCGLKWSPDKQLLASGGNDNQLLVWNLRRNEPIQTYTQHNAAVKALAWSPHHHGLL 580
Query: 113 VTGAGDGD 120
V+G G D
Sbjct: 581 VSGGGTAD 588
Score = 59 (25.8 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 128 LAIDPHEEFFVTGAGDGDIKVWSL--SGN 154
LA+ P E VTGAGD ++ W + GN
Sbjct: 658 LAMSPDGESIVTGAGDETLRFWHVFNKGN 686
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 108 (43.1 bits), Expect = 0.00093, P = 0.00093
Identities = 29/110 (26%), Positives = 50/110 (45%)
Query: 12 DFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLI 71
DF G+C +A AG + K +WD+ + LVQ + H ++L F P LI
Sbjct: 194 DFHPSGTC--IAAAGMDNTVK---VWDT---RTHRLVQHYQLHSAAVNALSFHPSGNYLI 245
Query: 72 SAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121
+A + ++DL + + + H+ P +A E+F +G D +
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQV 295
>UNIPROTKB|Q8IU52 [details] [associations]
symbol:TUWD12 "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 HOVERGEN:HBG057502
UniGene:Hs.604487 HGNC:HGNC:30836 HSSP:Q02793 EMBL:AB053266
EMBL:AB053276 IPI:IPI00796655 SMR:Q8IU52 STRING:Q8IU52
Ensembl:ENST00000393179 Uniprot:Q8IU52
Length = 348
Score = 104 (41.7 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 26/95 (27%), Positives = 42/95 (44%)
Query: 29 SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLV-FAPQHQLLISAGKKGDICVIDLRQR 87
SE K + +WD+ K V F G ++ V F P + SAG + V D+R
Sbjct: 33 SEDKTIKIWDTT---NKQCVNNF-SDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVN 88
Query: 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
+ + H V C++ P + +T + DG +K
Sbjct: 89 KLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLK 123
Score = 40 (19.1 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 124 PVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHL 156
PV ++ E F +G D + +W + + L
Sbjct: 142 PVFTVSFSKGGELFASGGADTQVLLWRTNFDEL 174
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.138 0.431 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 213 213 0.00084 112 3 11 22 0.47 32
31 0.49 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 66
No. of states in DFA: 604 (64 KB)
Total size of DFA: 187 KB (2105 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.21u 0.07s 20.28t Elapsed: 00:00:09
Total cpu time: 20.23u 0.07s 20.30t Elapsed: 00:00:09
Start: Thu Aug 15 12:49:29 2013 End: Thu Aug 15 12:49:38 2013