BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7434
(91 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|91090854|ref|XP_972647.1| PREDICTED: similar to homeobox transcription factor [Tribolium
castaneum]
gi|270014336|gb|EFA10784.1| goosecoid [Tribolium castaneum]
Length = 318
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 73/90 (81%), Gaps = 4/90 (4%)
Query: 4 ATGASMVAVAYPNLYPGYMTHAAATIAAMAASQHSAP---PPKRKRRHRTIFTEEQLEQL 60
A+ A +A+AYP LYPGY+ HA A + A+ S P PPKRKRRHRTIF+EEQLEQL
Sbjct: 175 ASSADFLAMAYPGLYPGYV-HALAAASQAASMAGSHPQHQPPKRKRRHRTIFSEEQLEQL 233
Query: 61 EATFEKTHYPDVVLREQLALKVDLKEERVE 90
EATFE+THYPDVVLREQLALKVDLKEERVE
Sbjct: 234 EATFEQTHYPDVVLREQLALKVDLKEERVE 263
>gi|198473724|ref|XP_001356417.2| GA15485 [Drosophila pseudoobscura pseudoobscura]
gi|198138080|gb|EAL33481.2| GA15485 [Drosophila pseudoobscura pseudoobscura]
Length = 527
Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/127 (53%), Positives = 69/127 (54%), Gaps = 48/127 (37%)
Query: 12 VAYPNLYPGYM------------------THAAATIAAMAA-----------SQHS---- 38
VAYPN YP YM H AA AA A S HS
Sbjct: 307 VAYPNFYPNYMHAAAVAHVAAAQMQAHVSGHGAAAAAAAAGLAGHGHHPHHHSHHSHPHH 366
Query: 39 ---------------APPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVD 83
PPPKRKRRHRTIFTEEQLEQLEATF+KTHYPDVVLREQLALKVD
Sbjct: 367 LGHHHGQHHLGHLGHGPPPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVD 426
Query: 84 LKEERVE 90
LKEERVE
Sbjct: 427 LKEERVE 433
>gi|195147182|ref|XP_002014559.1| GL19249 [Drosophila persimilis]
gi|194106512|gb|EDW28555.1| GL19249 [Drosophila persimilis]
Length = 531
Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/127 (53%), Positives = 69/127 (54%), Gaps = 48/127 (37%)
Query: 12 VAYPNLYPGYM------------------THAAATIAAMAA-----------SQHS---- 38
VAYPN YP YM H AA AA A S HS
Sbjct: 311 VAYPNFYPNYMHAAAVAHVAAAQMQAHVSGHGAAAAAAAAGLAGHGHHPHHHSHHSHPHH 370
Query: 39 ---------------APPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVD 83
PPPKRKRRHRTIFTEEQLEQLEATF+KTHYPDVVLREQLALKVD
Sbjct: 371 LGHHHGQHHLGHLGHGPPPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVD 430
Query: 84 LKEERVE 90
LKEERVE
Sbjct: 431 LKEERVE 437
>gi|193678843|ref|XP_001943352.1| PREDICTED: hypothetical protein LOC100162381 [Acyrthosiphon pisum]
Length = 324
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 65/90 (72%), Gaps = 8/90 (8%)
Query: 9 MVAVAYPNLYPGYMTHAAATIAAMA--------ASQHSAPPPKRKRRHRTIFTEEQLEQL 60
+ A Y ++YP YM A T A AS + PP KRKRRHRTIFTEEQLEQL
Sbjct: 157 VAAAGYQSIYPSYMMAMAVTGGHGAAGGHHHGPASMFAGPPAKRKRRHRTIFTEEQLEQL 216
Query: 61 EATFEKTHYPDVVLREQLALKVDLKEERVE 90
EATFEKTHYPDVVLREQLALKVDLKEERVE
Sbjct: 217 EATFEKTHYPDVVLREQLALKVDLKEERVE 246
>gi|195032852|ref|XP_001988574.1| GH10501 [Drosophila grimshawi]
gi|193904574|gb|EDW03441.1| GH10501 [Drosophila grimshawi]
Length = 565
Score = 117 bits (293), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 73/125 (58%), Gaps = 48/125 (38%)
Query: 12 VAYPNLYPGYMTHAAATIAAMAASQ-------------------------HS-------- 38
VAYPN YP YM HAAA +A +AA+Q HS
Sbjct: 351 VAYPNFYPNYM-HAAA-VAHVAAAQMQAHVSGHGAAAAGLSGHGHHPHHPHSHTHPHLSH 408
Query: 39 -------------APPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLK 85
PPPKRKRRHRTIFTEEQLEQLEATF+KTHYPDVVLREQLALKVDLK
Sbjct: 409 HAQHHLGLGHLGHGPPPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLK 468
Query: 86 EERVE 90
EERVE
Sbjct: 469 EERVE 473
>gi|242022192|ref|XP_002431525.1| Homeobox protein ceh-10, putative [Pediculus humanus corporis]
gi|212516819|gb|EEB18787.1| Homeobox protein ceh-10, putative [Pediculus humanus corporis]
Length = 210
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/98 (65%), Positives = 70/98 (71%), Gaps = 16/98 (16%)
Query: 9 MVAVAYPNLYP-----GYMTHAAAT-IAAMAASQHSA----------PPPKRKRRHRTIF 52
+ AYPNLY YM+HAAA+ + A+ + S PPKRKRRHRTIF
Sbjct: 105 LAVAAYPNLYNSAAAANYMSHAAASALVALNMANGSFHHHGHHSLHGAPPKRKRRHRTIF 164
Query: 53 TEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
TEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE
Sbjct: 165 TEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 202
>gi|1708053|sp|P54366.1|GSC_DROME RecName: Full=Homeobox protein goosecoid
gi|1177383|emb|CAA64699.1| gsc [Drosophila melanogaster]
gi|1399587|gb|AAB17948.1| goosecoid [Drosophila melanogaster]
Length = 419
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 69/122 (56%), Gaps = 44/122 (36%)
Query: 12 VAYPNLYPGYMTHAAA-------------TIAAMAASQHS-------------------- 38
VAYPN YP YM HAAA + AA S H
Sbjct: 211 VAYPNFYPNYM-HAAAVAHVAAAQMQAHVSGAAAGLSGHGHHPHHPHGHPHHPHLGAHHH 269
Query: 39 ----------APPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
PPPKRKRRHRTIFTEEQLEQLEATF+KTHYPDVVLREQLALKVDLKEER
Sbjct: 270 GQHHLSHLGHGPPPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEER 329
Query: 89 VE 90
VE
Sbjct: 330 VE 331
>gi|212288009|gb|ABI34245.3| RT01146p [Drosophila melanogaster]
Length = 424
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 69/122 (56%), Gaps = 44/122 (36%)
Query: 12 VAYPNLYPGYMTHAAA-------------TIAAMAASQHS-------------------- 38
VAYPN YP YM HAAA + AA S H
Sbjct: 216 VAYPNFYPNYM-HAAAVAHVAAAQMQAHVSGAAAGLSGHGHHPHHPHGHPHHPHLGAHHH 274
Query: 39 ----------APPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
PPPKRKRRHRTIFTEEQLEQLEATF+KTHYPDVVLREQLALKVDLKEER
Sbjct: 275 GQHHLSHLGHGPPPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEER 334
Query: 89 VE 90
VE
Sbjct: 335 VE 336
>gi|195350153|ref|XP_002041606.1| GM16652 [Drosophila sechellia]
gi|194123379|gb|EDW45422.1| GM16652 [Drosophila sechellia]
Length = 419
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 69/122 (56%), Gaps = 44/122 (36%)
Query: 12 VAYPNLYPGYMTHAAA-------------TIAAMAASQHS-------------------- 38
VAYPN YP YM HAAA + AA S H
Sbjct: 211 VAYPNFYPNYM-HAAAVAHVAAAQMQAHVSGAAAGLSGHGHHPHHPHGHPHHPHLGAHHH 269
Query: 39 ----------APPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
PPPKRKRRHRTIFTEEQLEQLEATF+KTHYPDVVLREQLALKVDLKEER
Sbjct: 270 GQHHLSHLGHGPPPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEER 329
Query: 89 VE 90
VE
Sbjct: 330 VE 331
>gi|17136854|ref|NP_476949.1| goosecoid, isoform A [Drosophila melanogaster]
gi|7296181|gb|AAF51473.1| goosecoid, isoform A [Drosophila melanogaster]
gi|115646581|gb|ABI34211.2| RT01046p [Drosophila melanogaster]
gi|208879498|gb|ACI31294.1| IP21556p [Drosophila melanogaster]
Length = 419
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 69/122 (56%), Gaps = 44/122 (36%)
Query: 12 VAYPNLYPGYMTHAAA-------------TIAAMAASQHS-------------------- 38
VAYPN YP YM HAAA + AA S H
Sbjct: 211 VAYPNFYPNYM-HAAAVAHVAAAQMQAHVSGAAAGLSGHGHHPHHPHGHPHHPHLGAHHH 269
Query: 39 ----------APPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
PPPKRKRRHRTIFTEEQLEQLEATF+KTHYPDVVLREQLALKVDLKEER
Sbjct: 270 GQHHLSHLGHGPPPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEER 329
Query: 89 VE 90
VE
Sbjct: 330 VE 331
>gi|221330585|ref|NP_001137762.1| goosecoid, isoform B [Drosophila melanogaster]
gi|220901896|gb|ACL82969.1| goosecoid, isoform B [Drosophila melanogaster]
Length = 485
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 69/122 (56%), Gaps = 44/122 (36%)
Query: 12 VAYPNLYPGYMTHAAA-------------TIAAMAASQHS-------------------- 38
VAYPN YP YM HAAA + AA S H
Sbjct: 277 VAYPNFYPNYM-HAAAVAHVAAAQMQAHVSGAAAGLSGHGHHPHHPHGHPHHPHLGAHHH 335
Query: 39 ----------APPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
PPPKRKRRHRTIFTEEQLEQLEATF+KTHYPDVVLREQLALKVDLKEER
Sbjct: 336 GQHHLSHLGHGPPPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEER 395
Query: 89 VE 90
VE
Sbjct: 396 VE 397
>gi|194853624|ref|XP_001968195.1| GG24636 [Drosophila erecta]
gi|190660062|gb|EDV57254.1| GG24636 [Drosophila erecta]
Length = 478
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 69/122 (56%), Gaps = 44/122 (36%)
Query: 12 VAYPNLYPGYMTHAAA-------------TIAAMAASQHS-------------------- 38
VAYPN YP YM HAAA + AA S H
Sbjct: 270 VAYPNFYPNYM-HAAAVAHVAAAQMQAHVSGAAAGLSGHGHHPHHPHGHPHHPHLGAHHH 328
Query: 39 ----------APPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
PPPKRKRRHRTIFTEEQLEQLEATF+KTHYPDVVLREQLALKVDLKEER
Sbjct: 329 GQHHLSHLGHGPPPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEER 388
Query: 89 VE 90
VE
Sbjct: 389 VE 390
>gi|194758609|ref|XP_001961554.1| GF14876 [Drosophila ananassae]
gi|190615251|gb|EDV30775.1| GF14876 [Drosophila ananassae]
Length = 496
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 66/123 (53%), Gaps = 44/123 (35%)
Query: 12 VAYPNLYPGYM--------------THAAATIAAMAASQHS------------------- 38
VAYPN YP YM H + A +A H
Sbjct: 287 VAYPNFYPNYMHAAAVAHVAAAQMQAHVSGAAAGLAGHGHHPHHPHAHPHHPHLGGHHHG 346
Query: 39 -----------APPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEE 87
PPPKRKRRHRTIFTEEQLEQLEATF+KTHYPDVVLREQLALKVDLKEE
Sbjct: 347 PGQHHLGHLGHGPPPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEE 406
Query: 88 RVE 90
RVE
Sbjct: 407 RVE 409
>gi|195470314|ref|XP_002087453.1| GE15985 [Drosophila yakuba]
gi|194173554|gb|EDW87165.1| GE15985 [Drosophila yakuba]
Length = 528
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 69/122 (56%), Gaps = 44/122 (36%)
Query: 12 VAYPNLYPGYMTHAAA-------------TIAAMAASQHS-------------------- 38
VAYPN YP YM HAAA + AA S H
Sbjct: 320 VAYPNFYPNYM-HAAAVAHVAAAQMQAHVSGAAAGLSGHGHHPHHPHGHPHHPHLGAHHH 378
Query: 39 ----------APPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
PPPKRKRRHRTIFTEEQLEQLEATF+KTHYPDVVLREQLALKVDLKEER
Sbjct: 379 GPHHLSHLGHGPPPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEER 438
Query: 89 VE 90
VE
Sbjct: 439 VE 440
>gi|195575591|ref|XP_002077661.1| GD22947 [Drosophila simulans]
gi|194189670|gb|EDX03246.1| GD22947 [Drosophila simulans]
Length = 237
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 71/131 (54%), Gaps = 44/131 (33%)
Query: 3 IATGASMVAVAYPNLYPGYMTHAAA-------------TIAAMAASQHS----------- 38
A S VAYPN YP YM HAAA + AA S H
Sbjct: 20 FAASPSDFLVAYPNFYPNYM-HAAAVAHVAAAQMQAHVSGAAAGLSGHGHHPHHPHGHPH 78
Query: 39 -------------------APPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLA 79
PPPKRKRRHRTIFTEEQLEQLEATF+KTHYPDVVLREQLA
Sbjct: 79 HPHLGAHHHGQHHLSHLGHGPPPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLA 138
Query: 80 LKVDLKEERVE 90
LKVDLKEERVE
Sbjct: 139 LKVDLKEERVE 149
>gi|195072066|ref|XP_001997113.1| GH25307 [Drosophila grimshawi]
gi|193906247|gb|EDW05114.1| GH25307 [Drosophila grimshawi]
Length = 152
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/128 (52%), Positives = 72/128 (56%), Gaps = 48/128 (37%)
Query: 9 MVAVAYPNLYPGYMTHAAATIAAMAASQ-------------------------HS----- 38
+ VAYPN YP YM AA +A +AA+Q HS
Sbjct: 15 FLLVAYPNFYPNYMH--AAAVAHVAAAQMQAHVSGHGAAAAGLSGHGHHPHHPHSHTHPH 72
Query: 39 ----------------APPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKV 82
PPPKRKRRHRTIFTEEQLEQLEATF+KTHYPDVVLREQLALKV
Sbjct: 73 LSHHAQHHLGLGHLGHGPPPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKV 132
Query: 83 DLKEERVE 90
DLKEERVE
Sbjct: 133 DLKEERVE 140
>gi|345488261|ref|XP_001602803.2| PREDICTED: diencephalon/mesencephalon homeobox protein 1-like,
partial [Nasonia vitripennis]
Length = 185
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/104 (57%), Positives = 67/104 (64%), Gaps = 18/104 (17%)
Query: 5 TGASMVAVAYPNLYPGY----MTHAAATIAAMAASQHSAPP--------------PKRKR 46
T A +A AYP LYPG M A ++ A H A P KRKR
Sbjct: 5 TSADFLAAAYPGLYPGGYVAAMAAAGVSLHGQPAFYHGAHPYQLSPSGGPGVGPMAKRKR 64
Query: 47 RHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
RHRTIFTEEQLEQLEATF+KTHYPDV+LREQLAL+VDLKEER+E
Sbjct: 65 RHRTIFTEEQLEQLEATFDKTHYPDVLLREQLALQVDLKEERIE 108
>gi|307206696|gb|EFN84651.1| Homeobox protein goosecoid [Harpegnathos saltator]
Length = 351
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 67/103 (65%), Gaps = 17/103 (16%)
Query: 5 TGASMVAVAYPNLYPGY----MTHAAATIAAMAASQHSA-------------PPPKRKRR 47
T A +A AYP LYPG M A ++ A H+ P KRKRR
Sbjct: 180 TSADFLAAAYPGLYPGGYVAAMAAAGVSLHGQPAFYHAGHHYQINPNNPGMGPMAKRKRR 239
Query: 48 HRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
HRTIFTEEQLEQLEATF+KTHYPDV+LREQLAL+VDLKEER+E
Sbjct: 240 HRTIFTEEQLEQLEATFDKTHYPDVLLREQLALQVDLKEERIE 282
>gi|357609528|gb|EHJ66497.1| putative homeobox transcription factor [Danaus plexippus]
Length = 172
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 49/53 (92%), Positives = 52/53 (98%)
Query: 38 SAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
S PPPKRKRRHRTIFTEEQLEQLE+TF+KTHYPDVVLREQLAL+VDLKEERVE
Sbjct: 104 SGPPPKRKRRHRTIFTEEQLEQLESTFDKTHYPDVVLREQLALRVDLKEERVE 156
>gi|383853808|ref|XP_003702414.1| PREDICTED: homeobox protein goosecoid isoform B-like [Megachile
rotundata]
Length = 331
Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 68/103 (66%), Gaps = 17/103 (16%)
Query: 5 TGASMVAVAYPNLYPGY----MTHAAATIAAMAASQHSAPP-------------PKRKRR 47
T A + A AYP+LY G M A ++ A H+A P KRKRR
Sbjct: 156 TSADLFAAAYPSLYSGGYVAAMAAAGVSLHGQPAFYHAAHPYQINPNAGAVGPMAKRKRR 215
Query: 48 HRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
HRTIFTEEQLEQLEATF+KTHYPDV+LREQLAL+VDLKEER+E
Sbjct: 216 HRTIFTEEQLEQLEATFDKTHYPDVILREQLALQVDLKEERIE 258
>gi|110757324|ref|XP_001121922.1| PREDICTED: homeobox protein goosecoid isoform B [Apis mellifera]
Length = 328
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 68/103 (66%), Gaps = 17/103 (16%)
Query: 5 TGASMVAVAYPNLYPGY----MTHAAATIAAMAASQHSAPP-------------PKRKRR 47
T A + A AYP+LY G M A ++ A H+A P KRKRR
Sbjct: 157 TSADLFAAAYPSLYSGGYVAAMAAAGVSLHGQPAFYHAAHPYQINPNATAVGPMAKRKRR 216
Query: 48 HRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
HRTIFTEEQLEQLEATF+KTHYPDV+LREQLAL+VDLKEER+E
Sbjct: 217 HRTIFTEEQLEQLEATFDKTHYPDVILREQLALQVDLKEERIE 259
>gi|350414395|ref|XP_003490304.1| PREDICTED: homeobox protein goosecoid isoform A-like [Bombus
impatiens]
Length = 331
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 67/103 (65%), Gaps = 17/103 (16%)
Query: 5 TGASMVAVAYPNLYPGY----MTHAAATIAAMAASQHSAPP-------------PKRKRR 47
T A + A AYP LY G M A ++ A H+A P KRKRR
Sbjct: 158 TSADLFAAAYPTLYSGGYVAAMAAAGVSLHGQPAFYHAAHPYQINPNAAAVGPMAKRKRR 217
Query: 48 HRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
HRTIFTEEQLEQLEATF+KTHYPDV+LREQLAL+VDLKEER+E
Sbjct: 218 HRTIFTEEQLEQLEATFDKTHYPDVILREQLALQVDLKEERIE 260
>gi|340715201|ref|XP_003396107.1| PREDICTED: homeobox protein goosecoid isoform A-like [Bombus
terrestris]
Length = 331
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 67/103 (65%), Gaps = 17/103 (16%)
Query: 5 TGASMVAVAYPNLYPGY----MTHAAATIAAMAASQHSAPP-------------PKRKRR 47
T A + A AYP LY G M A ++ A H+A P KRKRR
Sbjct: 158 TSADLFAAAYPTLYSGGYVAAMAAAGVSLHGQPAFYHAAHPYQINPNAAAVGPMAKRKRR 217
Query: 48 HRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
HRTIFTEEQLEQLEATF+KTHYPDV+LREQLAL+VDLKEER+E
Sbjct: 218 HRTIFTEEQLEQLEATFDKTHYPDVILREQLALQVDLKEERIE 260
>gi|380011252|ref|XP_003689724.1| PREDICTED: homeobox protein goosecoid isoform A-like [Apis florea]
Length = 329
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 68/103 (66%), Gaps = 17/103 (16%)
Query: 5 TGASMVAVAYPNLYPGY----MTHAAATIAAMAASQHSAPP-------------PKRKRR 47
T A + A AYP+LY G M A ++ A H+A P KRKRR
Sbjct: 157 TSADLFAAAYPSLYSGGYVAAMAAAGVSLHGQPAFYHAAHPYQINPNAAAVGPMAKRKRR 216
Query: 48 HRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
HRTIFTEEQLEQLEATF+KTHYPDV+LREQLAL+VDLKEER+E
Sbjct: 217 HRTIFTEEQLEQLEATFDKTHYPDVILREQLALQVDLKEERIE 259
>gi|332023432|gb|EGI63675.1| Homeobox protein goosecoid [Acromyrmex echinatior]
Length = 205
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 69/107 (64%), Gaps = 17/107 (15%)
Query: 1 MRIATGASMVAVAYPNLYPGY----MTHAAATIAAMAASQHSAPP-------------PK 43
M + +++A AYP LYPG M A ++ A H+ P K
Sbjct: 26 MGVRKKPAVLAAAYPGLYPGGYVAAMAAAGVSLHGQPAFYHAGHPYQINPNNPGMGPMAK 85
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
RKRRHRTIFTEEQLEQLEATF+KTHYPDV+LREQLAL+VDLKEER+E
Sbjct: 86 RKRRHRTIFTEEQLEQLEATFDKTHYPDVLLREQLALQVDLKEERIE 132
>gi|322790278|gb|EFZ15277.1| hypothetical protein SINV_12460 [Solenopsis invicta]
Length = 170
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 63/95 (66%), Gaps = 17/95 (17%)
Query: 13 AYPNLYPGY----MTHAAATIAAMAASQHSAPP-------------PKRKRRHRTIFTEE 55
AYP LYPG M A ++ A H+ P KRKRRHRTIFTEE
Sbjct: 2 AYPGLYPGGYVAAMAAAGVSLHGQPAFYHAGHPYQINPNNPGMGPMAKRKRRHRTIFTEE 61
Query: 56 QLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
QLEQLEATF+KTHYPDV+LREQLAL+VDLKEER+E
Sbjct: 62 QLEQLEATFDKTHYPDVLLREQLALQVDLKEERIE 96
>gi|195437556|ref|XP_002066706.1| GK24629 [Drosophila willistoni]
gi|194162791|gb|EDW77692.1| GK24629 [Drosophila willistoni]
Length = 460
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 68/131 (51%), Positives = 70/131 (53%), Gaps = 44/131 (33%)
Query: 4 ATGASMVAVAYPNLYPGYM-----THAAATIAAMAASQHSA------------------- 39
A S VAYPN YP YM H AA AS H+A
Sbjct: 225 AASPSDFLVAYPNFYPNYMHAAAVAHVAAAQMQAHASGHAAVAAAAGLHSHHPHHSHHPH 284
Query: 40 --------------------PPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLA 79
PPPKRKRRHRTIFTEEQLEQLEATF+KTHYPDVVLREQLA
Sbjct: 285 HPSHHLGHHGQHHLSHLGHGPPPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLA 344
Query: 80 LKVDLKEERVE 90
LKVDLKEERVE
Sbjct: 345 LKVDLKEERVE 355
>gi|195388382|ref|XP_002052859.1| GJ19666 [Drosophila virilis]
gi|194149316|gb|EDW65014.1| GJ19666 [Drosophila virilis]
Length = 556
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/48 (97%), Positives = 48/48 (100%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
KRKRRHRTIFTEEQLEQLEATF+KTHYPDVVLREQLALKVDLKEERVE
Sbjct: 413 KRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERVE 460
>gi|11932960|emb|CAC19336.1| homeobox transcription factor [Platynereis dumerilii]
Length = 279
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 62/84 (73%), Gaps = 11/84 (13%)
Query: 7 ASMVAVAYPNLYPGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEK 66
A ++A AYP +PG M AA + M Q KRKRRHRTIFTEEQLE LEATF K
Sbjct: 75 ADLLASAYPGAFPGLM---AADL--MRVGQ------KRKRRHRTIFTEEQLEALEATFAK 123
Query: 67 THYPDVVLREQLALKVDLKEERVE 90
THYPDV+LRE+LA+KVDLKEERVE
Sbjct: 124 THYPDVMLREELAMKVDLKEERVE 147
>gi|195118212|ref|XP_002003634.1| GI18020 [Drosophila mojavensis]
gi|193914209|gb|EDW13076.1| GI18020 [Drosophila mojavensis]
Length = 538
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/48 (97%), Positives = 48/48 (100%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
KRKRRHRTIFTEEQLEQLEATF+KTHYPDVVLREQLALKVDLKEERVE
Sbjct: 391 KRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERVE 438
>gi|68144510|gb|AAY86176.1| goosecoid [Heliocidaris tuberculata]
Length = 348
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/48 (93%), Positives = 48/48 (100%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
KRKRRHRTIFTEEQLEQLEATFEKTHYPDV+LRE+LA+KVDLKEERVE
Sbjct: 148 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVMLREELAIKVDLKEERVE 195
>gi|307174676|gb|EFN65059.1| Homeobox protein goosecoid [Camponotus floridanus]
Length = 151
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 49/52 (94%)
Query: 39 APPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P KRKRRHRTIFTEEQLEQLEATF+KTHYPDV+LREQLAL+VDLKEER+E
Sbjct: 31 GPMAKRKRRHRTIFTEEQLEQLEATFDKTHYPDVLLREQLALQVDLKEERIE 82
>gi|68144508|gb|AAY86175.1| goosecoid [Heliocidaris erythrogramma]
Length = 321
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/48 (93%), Positives = 48/48 (100%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
KRKRRHRTIFTEEQLEQLEATFEKTHYPDV+LRE+LA+KVDLKEERVE
Sbjct: 149 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVMLREELAIKVDLKEERVE 196
>gi|322366524|gb|ADW95336.1| goosecoid [Paracentrotus lividus]
Length = 329
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/48 (93%), Positives = 48/48 (100%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
KRKRRHRTIFTEEQLEQLEATFEKTHYPDV+LRE+LA+KVDLKEERVE
Sbjct: 149 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVMLREELAIKVDLKEERVE 196
>gi|19577382|emb|CAD27764.1| putative transcription factor [Anopheles gambiae]
Length = 319
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 65/98 (66%), Gaps = 15/98 (15%)
Query: 8 SMVAVAYPNLYPGYM------THAAATIAAMAASQHSAPP---------PKRKRRHRTIF 52
+++ VAYP+ Y+ H + +A + + P KRKRRHRTIF
Sbjct: 135 NILGVAYPSSCHNYLQPDLFAAHLHQQVGLVACNGNFRPRYPFLNADSHIKRKRRHRTIF 194
Query: 53 TEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
TEEQLEQLEATF+KTHYPDV+LRE+LA+KVDLKEERVE
Sbjct: 195 TEEQLEQLEATFDKTHYPDVLLREKLAIKVDLKEERVE 232
>gi|47550979|ref|NP_999663.1| goosecoid transcription factor [Strongylocentrotus purpuratus]
gi|11127990|gb|AAG31170.1|AF315231_1 goosecoid transcription factor Gsc [Strongylocentrotus purpuratus]
Length = 320
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/48 (93%), Positives = 48/48 (100%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
KRKRRHRTIFTEEQLEQLEATFEKTHYPDV+LRE+LA+KVDLKEERVE
Sbjct: 143 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVMLREELAIKVDLKEERVE 190
>gi|118794479|ref|XP_321511.3| AGAP001593-PA [Anopheles gambiae str. PEST]
gi|116116316|gb|EAA01371.4| AGAP001593-PA [Anopheles gambiae str. PEST]
Length = 319
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 65/98 (66%), Gaps = 15/98 (15%)
Query: 8 SMVAVAYPNLYPGYM------THAAATIAAMAASQHSAPP---------PKRKRRHRTIF 52
+++ +AYP+ Y+ H + +A + + P KRKRRHRTIF
Sbjct: 135 NILGIAYPSSCHNYLQPDLFAAHLHQQVGLVACNGNFRPRYPFLNADSHIKRKRRHRTIF 194
Query: 53 TEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
TEEQLEQLEATF+KTHYPDV+LRE+LA+KVDLKEERVE
Sbjct: 195 TEEQLEQLEATFDKTHYPDVLLREKLAIKVDLKEERVE 232
>gi|38325834|gb|AAR17089.1| goosecoid [Lytechinus variegatus]
Length = 327
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 48/48 (100%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
KRKRRHRTIFTEEQLEQLEATFEKTHYP+V+LRE+LA+KVDLKEERVE
Sbjct: 147 KRKRRHRTIFTEEQLEQLEATFEKTHYPNVMLREELAIKVDLKEERVE 194
>gi|22859614|emb|CAD45551.1| goosecoid protein [Patella vulgata]
Length = 251
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 57/77 (74%), Gaps = 10/77 (12%)
Query: 14 YPNLYPGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVV 73
YP+ +PG+++ A A KRKRRHRTIFTEEQLE LE+TF +THYPDV+
Sbjct: 82 YPSPFPGFLSPADLARAGQ----------KRKRRHRTIFTEEQLEPLESTFHETHYPDVL 131
Query: 74 LREQLALKVDLKEERVE 90
LRE+LA+KVDLKEERVE
Sbjct: 132 LREELAIKVDLKEERVE 148
>gi|157114691|ref|XP_001652375.1| hypothetical protein AaeL_AAEL006944 [Aedes aegypti]
gi|108877194|gb|EAT41419.1| AAEL006944-PA [Aedes aegypti]
Length = 217
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 64/100 (64%), Gaps = 15/100 (15%)
Query: 6 GASMVAVAYPNLYPGYMTHA--AATI---AAMAASQHSAPP----------PKRKRRHRT 50
+++ + YP+ YM H AA + + + S P KRKRRHRT
Sbjct: 101 STNLLGITYPSSCHSYMQHDLFAAQLHSPVGLVSCDGSFRPRYPFLNADTHIKRKRRHRT 160
Query: 51 IFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
IFTEEQLEQLEA F+KTHYPDV+LRE+LA+KVDLKEERVE
Sbjct: 161 IFTEEQLEQLEAAFDKTHYPDVLLREKLAVKVDLKEERVE 200
>gi|405974288|gb|EKC38944.1| Homeobox protein goosecoid [Crassostrea gigas]
Length = 238
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 59/86 (68%), Gaps = 11/86 (12%)
Query: 5 TGASMVAVAYPNLYPGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATF 64
T + A AY + +PG MT A A KRKRRHRTIFTEEQLE+LE TF
Sbjct: 59 TPQELFAAAY-SPFPGLMTAADLARAGQ----------KRKRRHRTIFTEEQLEELEKTF 107
Query: 65 EKTHYPDVVLREQLALKVDLKEERVE 90
KTHYPDV+LRE+LA+K+DLKEERVE
Sbjct: 108 NKTHYPDVLLREELAMKIDLKEERVE 133
>gi|156389454|ref|XP_001635006.1| predicted protein [Nematostella vectensis]
gi|156222095|gb|EDO42943.1| predicted protein [Nematostella vectensis]
Length = 211
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 62/89 (69%), Gaps = 8/89 (8%)
Query: 4 ATGASMVAVAYPNLY--PGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLE 61
A + + AYP + PGY+ A + SQ PKRKRRHRTIFTEEQLE LE
Sbjct: 37 APAPCLFSHAYPVIPAPPGYLV-GFPRYADVLRSQ-----PKRKRRHRTIFTEEQLELLE 90
Query: 62 ATFEKTHYPDVVLREQLALKVDLKEERVE 90
TF+KTHYPDV+LRE+LA+KVDLKEERVE
Sbjct: 91 TTFQKTHYPDVLLREELAMKVDLKEERVE 119
>gi|76563880|gb|ABA46370.1| goosecoid-like protein [Nematostella vectensis]
Length = 210
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 62/89 (69%), Gaps = 9/89 (10%)
Query: 4 ATGASMVAVAYPNLY--PGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLE 61
A + + AYP + PGY+ A + SQ PKRKRRHRTIFTEEQLE LE
Sbjct: 37 APAPCLFSHAYPVIPAPPGYL--GFPRYADVLRSQ-----PKRKRRHRTIFTEEQLELLE 89
Query: 62 ATFEKTHYPDVVLREQLALKVDLKEERVE 90
TF+KTHYPDV+LRE+LA+KVDLKEERVE
Sbjct: 90 TTFQKTHYPDVLLREELAMKVDLKEERVE 118
>gi|99030986|gb|ABF61778.1| goosecoid [Nematostella vectensis]
Length = 134
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 62/89 (69%), Gaps = 8/89 (8%)
Query: 4 ATGASMVAVAYPNLY--PGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLE 61
A + + AYP + PGY+ A + SQ PKRKRRHRTIFTEEQLE LE
Sbjct: 37 APAPCLFSHAYPVIPAPPGYLV-GFPRYADVLRSQ-----PKRKRRHRTIFTEEQLELLE 90
Query: 62 ATFEKTHYPDVVLREQLALKVDLKEERVE 90
TF+KTHYPDV+LRE+LA+KVDLKEERVE
Sbjct: 91 TTFQKTHYPDVLLREELAMKVDLKEERVE 119
>gi|425918641|gb|AFY12009.1| goosecoid [Priapulus caudatus]
Length = 260
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/48 (89%), Positives = 46/48 (95%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
KRKRRHRTIFTEEQLE LEATF+KTHYPDV+LRE+LA KVDLKEERVE
Sbjct: 108 KRKRRHRTIFTEEQLETLEATFDKTHYPDVLLREELAAKVDLKEERVE 155
>gi|443693092|gb|ELT94535.1| hypothetical protein CAPTEDRAFT_225092 [Capitella teleta]
Length = 292
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Query: 20 GYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLA 79
G++ +AA+A H+ KRKRRHRTIFTEEQL++LE TF KTHYPDV+LRE+LA
Sbjct: 115 GFVPLDVLRMAAVAGC-HNLQQHKRKRRHRTIFTEEQLDELERTFHKTHYPDVLLREELA 173
Query: 80 LKVDLKEERVE 90
+K+DLKEERVE
Sbjct: 174 IKIDLKEERVE 184
>gi|335371119|gb|AEH57088.1| goosecoid [Bugula neritina]
Length = 247
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 47/48 (97%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
KRKRRHRTIF+EEQL++LE TF+KTHYPDV+LRE+LA+K+DLKEERVE
Sbjct: 108 KRKRRHRTIFSEEQLDELEKTFQKTHYPDVLLREELAIKIDLKEERVE 155
>gi|118343808|ref|NP_001071728.1| transcription factor protein [Ciona intestinalis]
gi|70569799|dbj|BAE06479.1| transcription factor protein [Ciona intestinalis]
Length = 257
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/50 (82%), Positives = 45/50 (90%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P KRKRRHRTIFTE+QLE LE F+KTHYPDVV+REQLA KV+LKEERVE
Sbjct: 122 PAKRKRRHRTIFTEDQLEALENMFQKTHYPDVVMREQLAEKVELKEERVE 171
>gi|339248751|ref|XP_003373363.1| homeobox protein goosecoid [Trichinella spiralis]
gi|316970545|gb|EFV54468.1| homeobox protein goosecoid [Trichinella spiralis]
Length = 256
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 45/48 (93%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIF+EEQL +LE TF+KTHYPDV+LREQLA+K DLKEERVE
Sbjct: 129 RRKRRHRTIFSEEQLVELETTFQKTHYPDVLLREQLAMKTDLKEERVE 176
>gi|1518214|emb|CAB01921.1| COS2.2 [Ciona intestinalis]
Length = 162
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/50 (82%), Positives = 45/50 (90%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P KRKRRHRTIFTE+QLE LE F+KTHYPDVV+REQLA KV+LKEERVE
Sbjct: 45 PAKRKRRHRTIFTEDQLEALENMFQKTHYPDVVMREQLAEKVELKEERVE 94
>gi|241576088|ref|XP_002403318.1| homeobox domain, putative [Ixodes scapularis]
gi|215502193|gb|EEC11687.1| homeobox domain, putative [Ixodes scapularis]
Length = 145
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 45/48 (93%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFTE+QLEQLEA F +THYPDV LRE+LAL+VDL+EERVE
Sbjct: 23 RRKRRHRTIFTEDQLEQLEAAFLRTHYPDVGLREELALRVDLREERVE 70
>gi|82395400|gb|ABB72464.1| GSC-paired class homeobox protein [Nematostella vectensis]
gi|110339219|gb|ABG67873.1| GSC, partial [Nematostella vectensis]
Length = 60
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/46 (86%), Positives = 44/46 (95%)
Query: 45 KRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
KRRHRTIFTEEQLE LE TF+KTHYPDV+LRE+LA+KVDLKEERVE
Sbjct: 1 KRRHRTIFTEEQLELLETTFQKTHYPDVLLREELAMKVDLKEERVE 46
>gi|321459889|gb|EFX70937.1| hypothetical protein DAPPUDRAFT_29207 [Daphnia pulex]
Length = 58
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/46 (89%), Positives = 44/46 (95%)
Query: 45 KRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
KRRHRTIFTEEQLE+LEATF +THYPDV+LREQLAL VDLKEERVE
Sbjct: 1 KRRHRTIFTEEQLEKLEATFLQTHYPDVLLREQLALTVDLKEERVE 46
>gi|324530857|gb|ADY49120.1| Homeobox protein goosecoid, partial [Ascaris suum]
Length = 203
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 51/72 (70%), Gaps = 3/72 (4%)
Query: 19 PGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQL 78
PG+ + + ++ KRKRRHRTIF+EEQL+ LE+ F+ THYPDV+LRE+L
Sbjct: 74 PGFPYFGGGLLPSFNPMHYNG---KRKRRHRTIFSEEQLQILESAFQGTHYPDVMLREKL 130
Query: 79 ALKVDLKEERVE 90
AL+ DLKEERVE
Sbjct: 131 ALQCDLKEERVE 142
>gi|324512273|gb|ADY45090.1| Homeobox protein goosecoid [Ascaris suum]
Length = 159
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 51/72 (70%), Gaps = 3/72 (4%)
Query: 19 PGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQL 78
PG+ + + ++ KRKRRHRTIF+EEQL+ LE+ F+ THYPDV+LRE+L
Sbjct: 30 PGFPYFGGGLLPSFNPMHYNG---KRKRRHRTIFSEEQLQILESAFQGTHYPDVMLREKL 86
Query: 79 ALKVDLKEERVE 90
AL+ DLKEERVE
Sbjct: 87 ALQCDLKEERVE 98
>gi|170582027|ref|XP_001895944.1| Homeobox protein goosecoid [Brugia malayi]
gi|158596949|gb|EDP35204.1| Homeobox protein goosecoid, putative [Brugia malayi]
Length = 161
Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 55/79 (69%), Gaps = 5/79 (6%)
Query: 12 VAYPNLYPGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPD 71
+YP+ PG+ + I + + + KRKRRHRTIF+EEQL+ LE F+ THYPD
Sbjct: 84 FSYPH--PGFPYISNGFITSFHPFHYGS---KRKRRHRTIFSEEQLQILENAFQGTHYPD 138
Query: 72 VVLREQLALKVDLKEERVE 90
V+LRE+LA++ DLKEERVE
Sbjct: 139 VMLREKLAVQCDLKEERVE 157
>gi|312098724|ref|XP_003149144.1| homeobox protein goosecoid [Loa loa]
Length = 122
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 53/79 (67%), Gaps = 5/79 (6%)
Query: 12 VAYPNLYPGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPD 71
+YP +PG+ I + + KRKRRHRTIF+EEQL+ LE F+ THYPD
Sbjct: 49 FSYP--HPGFPYINNGFITSFHPFHYGG---KRKRRHRTIFSEEQLQILENAFQGTHYPD 103
Query: 72 VVLREQLALKVDLKEERVE 90
V+LRE+LA++ DLKEERVE
Sbjct: 104 VMLREKLAVQCDLKEERVE 122
>gi|402588476|gb|EJW82409.1| goosecoid [Wuchereria bancrofti]
Length = 236
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 54/79 (68%), Gaps = 5/79 (6%)
Query: 12 VAYPNLYPGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPD 71
+YP +PG+ I + + + KRKRRHRTIF+EEQL+ LE F+ THYPD
Sbjct: 84 FSYP--HPGFPYINNGFITSFHPFHYGS---KRKRRHRTIFSEEQLQILENAFQGTHYPD 138
Query: 72 VVLREQLALKVDLKEERVE 90
V+LRE+LA++ DLKEERVE
Sbjct: 139 VMLREKLAVQCDLKEERVE 157
>gi|393905837|gb|EJD74086.1| hypothetical protein LOAG_18551 [Loa loa]
Length = 222
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 53/78 (67%), Gaps = 5/78 (6%)
Query: 13 AYPNLYPGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDV 72
+YP +PG+ I + + KRKRRHRTIF+EEQL+ LE F+ THYPDV
Sbjct: 71 SYP--HPGFPYINNGFITSFHPFHYGG---KRKRRHRTIFSEEQLQILENAFQGTHYPDV 125
Query: 73 VLREQLALKVDLKEERVE 90
+LRE+LA++ DLKEERVE
Sbjct: 126 MLREKLAVQCDLKEERVE 143
>gi|323319545|gb|ADX36143.1| goosecoid [Schmidtea polychroa]
Length = 229
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 46/63 (73%)
Query: 28 TIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEE 87
T + +SQ RKRRHRTIF+E+QL+ LE TFE THYPDV RE+LA +VDL+EE
Sbjct: 146 TEKSNQSSQQGKINKNRKRRHRTIFSEQQLQFLEKTFELTHYPDVNTREELATRVDLQEE 205
Query: 88 RVE 90
RVE
Sbjct: 206 RVE 208
>gi|260791952|ref|XP_002590991.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
gi|229276191|gb|EEN47002.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
Length = 300
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 26 AATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLK 85
AA ++ +S H+A K+KRR+RT FT QLE++E F+KTHYPDV +REQLAL+ DL
Sbjct: 93 AADDSSEESSTHAAGDKKKKRRNRTTFTSFQLEEMERVFQKTHYPDVYMREQLALRADLT 152
Query: 86 EERVE 90
E RV+
Sbjct: 153 EARVQ 157
>gi|340730421|gb|AEK64851.1| aristaless-like homeobox protein [Branchiostoma floridae]
Length = 300
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 26 AATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLK 85
AA ++ +S H+A K+KRR+RT FT QLE++E F+KTHYPDV +REQLAL+ DL
Sbjct: 93 AADDSSEESSTHAAGDKKKKRRNRTTFTSFQLEEMERVFQKTHYPDVYMREQLALRADLT 152
Query: 86 EERVE 90
E RV+
Sbjct: 153 EARVQ 157
>gi|340730419|gb|AEK64850.1| aristaless-like homeobox protein [Branchiostoma floridae]
Length = 300
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 26 AATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLK 85
AA ++ +S H+A K+KRR+RT FT QLE++E F+KTHYPDV +REQLAL+ DL
Sbjct: 93 AADDSSEESSTHAAGDKKKKRRNRTTFTSFQLEEMERVFQKTHYPDVYMREQLALRADLT 152
Query: 86 EERVE 90
E RV+
Sbjct: 153 EARVQ 157
>gi|9739171|gb|AAF97935.1|AF281674_1 homeodomain protein goosecoid [Branchiostoma floridae]
Length = 243
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 63/105 (60%), Gaps = 22/105 (20%)
Query: 8 SMVAVAYPNLYPGYMTHAAATIAAMAASQHSAP----------------------PPKRK 45
+MVA YP YP A+A + + ++AP +RK
Sbjct: 43 AMVAQEYPTGYPATPCMASAYVPGLPLPAYAAPAWTTSPVQMAIGQATHPAMFGRQGRRK 102
Query: 46 RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
RRHRTIFTEEQLE LE TFEKTHYPDV+LRE+LA+KV+LKEERVE
Sbjct: 103 RRHRTIFTEEQLELLEKTFEKTHYPDVLLREELAMKVELKEERVE 147
>gi|260831452|ref|XP_002610673.1| hypothetical protein BRAFLDRAFT_116854 [Branchiostoma floridae]
gi|229296040|gb|EEN66683.1| hypothetical protein BRAFLDRAFT_116854 [Branchiostoma floridae]
Length = 243
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/41 (85%), Positives = 39/41 (95%)
Query: 50 TIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
TIFTEEQLE LE TFEKTHYPDV+LRE+LA+KV+LKEERVE
Sbjct: 107 TIFTEEQLELLEKTFEKTHYPDVLLREELAMKVELKEERVE 147
>gi|410928178|ref|XP_003977478.1| PREDICTED: homeobox protein goosecoid-like [Takifugu rubripes]
gi|336174367|dbj|BAK40073.1| homeobox protein Goosecoid [Takifugu niphobles]
Length = 237
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA KV L+EE+VE
Sbjct: 146 RRKRRHRTIFTDEQLEALEGLFQETKYPDVGTREQLARKVHLREEKVE 193
>gi|432936628|ref|XP_004082200.1| PREDICTED: homeobox protein goosecoid-like [Oryzias latipes]
Length = 238
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA KV L+EE+VE
Sbjct: 144 RRKRRHRTIFTDEQLEALEGLFQETKYPDVGTREQLARKVHLREEKVE 191
>gi|348544422|ref|XP_003459680.1| PREDICTED: homeobox protein goosecoid-like [Oreochromis niloticus]
Length = 241
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA KV L+EE+VE
Sbjct: 145 RRKRRHRTIFTDEQLEALEGLFQETKYPDVGTREQLARKVHLREEKVE 192
>gi|121503233|gb|ABM55173.1| GSC [Macaca mulatta]
gi|124013624|gb|ABM88069.1| GSC [Macaca nemestrina]
Length = 205
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA KV L+EE+VE
Sbjct: 158 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVE 205
>gi|395827761|ref|XP_003787064.1| PREDICTED: homeobox protein goosecoid [Otolemur garnettii]
Length = 257
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA KV L+EE+VE
Sbjct: 158 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVE 205
>gi|297695796|ref|XP_002825113.1| PREDICTED: homeobox protein goosecoid-like [Pongo abelii]
gi|146286197|sp|A2T7P4.1|GSC_PONPY RecName: Full=Homeobox protein goosecoid
gi|124054238|gb|ABM89322.1| GSC [Pongo pygmaeus]
Length = 257
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA KV L+EE+VE
Sbjct: 158 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVE 205
>gi|345804104|ref|XP_003435149.1| PREDICTED: homeobox protein goosecoid [Canis lupus familiaris]
Length = 284
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA KV L+EE+VE
Sbjct: 186 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVE 233
>gi|350587178|ref|XP_003482361.1| PREDICTED: homeobox protein goosecoid [Sus scrofa]
Length = 256
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA KV L+EE+VE
Sbjct: 158 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVE 205
>gi|146286198|sp|A1YFI3.1|GSC_SAGLB RecName: Full=Homeobox protein goosecoid
gi|121222552|gb|ABM47645.1| GSC [Saguinus labiatus]
Length = 257
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA KV L+EE+VE
Sbjct: 158 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVE 205
>gi|332223644|ref|XP_003260981.1| PREDICTED: homeobox protein goosecoid [Nomascus leucogenys]
Length = 257
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA KV L+EE+VE
Sbjct: 158 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVE 205
>gi|301770223|ref|XP_002920532.1| PREDICTED: homeobox protein goosecoid-like, partial [Ailuropoda
melanoleuca]
gi|281339670|gb|EFB15254.1| hypothetical protein PANDA_009264 [Ailuropoda melanoleuca]
Length = 255
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA KV L+EE+VE
Sbjct: 157 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVE 204
>gi|125490341|ref|NP_001074955.1| homeobox protein goosecoid [Pan troglodytes]
gi|397525873|ref|XP_003832877.1| PREDICTED: homeobox protein goosecoid [Pan paniscus]
gi|426377901|ref|XP_004055692.1| PREDICTED: homeobox protein goosecoid [Gorilla gorilla gorilla]
gi|146286194|sp|A1YEY5.1|GSC_GORGO RecName: Full=Homeobox protein goosecoid
gi|146286195|sp|A1YG57.1|GSC_PANPA RecName: Full=Homeobox protein goosecoid
gi|146286196|sp|A2T733.1|GSC_PANTR RecName: Full=Homeobox protein goosecoid
gi|120974606|gb|ABM46703.1| GSC [Gorilla gorilla]
gi|121483945|gb|ABM54282.1| GSC [Pan paniscus]
gi|124111203|gb|ABM91988.1| GSC [Pan troglodytes]
gi|410328429|gb|JAA33161.1| goosecoid homeobox [Pan troglodytes]
Length = 257
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA KV L+EE+VE
Sbjct: 158 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVE 205
>gi|341885919|gb|EGT41854.1| CBN-CEH-45 protein [Caenorhabditis brenneri]
Length = 235
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIF+EEQL LE TF THYPD RE+LA++ LKEERVE
Sbjct: 112 RRKRRHRTIFSEEQLNILETTFSSTHYPDATTREELAVQCSLKEERVE 159
>gi|300798207|ref|NP_001178802.1| homeobox protein goosecoid [Rattus norvegicus]
gi|149025438|gb|EDL81805.1| goosecoid [Rattus norvegicus]
Length = 256
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA KV L+EE+VE
Sbjct: 158 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVE 205
>gi|6754076|ref|NP_034481.1| homeobox protein goosecoid [Mus musculus]
gi|462296|sp|Q02591.1|GSC_MOUSE RecName: Full=Homeobox protein goosecoid
gi|193896|gb|AAA37826.1| homeobox protein [Mus musculus]
gi|2597980|emb|CAA73611.1| goosecoid homeobox protein [Mus musculus]
gi|2597982|emb|CAA73612.1| goosecoid homeobox protein [Mus musculus]
gi|148686844|gb|EDL18791.1| goosecoid [Mus musculus]
gi|182887941|gb|AAI60213.1| Goosecoid homeobox [synthetic construct]
Length = 256
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA KV L+EE+VE
Sbjct: 158 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVE 205
>gi|403274208|ref|XP_003928878.1| PREDICTED: homeobox protein goosecoid [Saimiri boliviensis
boliviensis]
Length = 257
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA KV L+EE+VE
Sbjct: 158 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVE 205
>gi|402877084|ref|XP_003902273.1| PREDICTED: homeobox protein goosecoid [Papio anubis]
Length = 259
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA KV L+EE+VE
Sbjct: 158 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVE 205
>gi|296215829|ref|XP_002754295.1| PREDICTED: homeobox protein goosecoid [Callithrix jacchus]
Length = 257
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA KV L+EE+VE
Sbjct: 158 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVE 205
>gi|27777663|ref|NP_776248.1| homeobox protein goosecoid [Homo sapiens]
gi|61252078|sp|P56915.2|GSC_HUMAN RecName: Full=Homeobox protein goosecoid
gi|27728744|gb|AAO18645.1| homeobox protein goosecoid [Homo sapiens]
gi|39795449|gb|AAH63580.1| Goosecoid homeobox [Homo sapiens]
gi|119602000|gb|EAW81594.1| goosecoid [Homo sapiens]
gi|208966388|dbj|BAG73208.1| goosecoid homeobox [synthetic construct]
Length = 257
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA KV L+EE+VE
Sbjct: 158 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVE 205
>gi|109084781|ref|XP_001100695.1| PREDICTED: homeobox protein goosecoid [Macaca mulatta]
Length = 259
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA KV L+EE+VE
Sbjct: 158 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVE 205
>gi|431839250|gb|ELK01177.1| Homeobox protein goosecoid [Pteropus alecto]
Length = 256
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA KV L+EE+VE
Sbjct: 158 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVE 205
>gi|328718058|ref|XP_003246373.1| PREDICTED: retinal homeobox protein Rx-B-like isoform 1
[Acyrthosiphon pisum]
gi|328718060|ref|XP_003246374.1| PREDICTED: retinal homeobox protein Rx-B-like isoform 2
[Acyrthosiphon pisum]
gi|328718062|ref|XP_003246375.1| PREDICTED: retinal homeobox protein Rx-B-like isoform 3
[Acyrthosiphon pisum]
gi|328718064|ref|XP_003246376.1| PREDICTED: retinal homeobox protein Rx-B-like isoform 4
[Acyrthosiphon pisum]
Length = 218
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 30 AAMAASQHSAPPPKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+++ Q+S KRK RR+RT FT QLE+LE +F+KTHYPDV RE+LA+++DL E R
Sbjct: 59 GSLSTDQNSNSNVKRKQRRYRTTFTNFQLEELENSFQKTHYPDVFFREELAMRIDLTEAR 118
Query: 89 VE 90
V+
Sbjct: 119 VQ 120
>gi|17511149|ref|NP_490823.1| Protein CEH-45 [Caenorhabditis elegans]
gi|351064758|emb|CCD73241.1| Protein CEH-45 [Caenorhabditis elegans]
Length = 229
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 41/59 (69%)
Query: 32 MAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
MA H +RKRRHRTIF+EEQL LE TF THYPD RE+LA++ LKEERVE
Sbjct: 96 MAPYHHQHYASRRKRRHRTIFSEEQLNILETTFSTTHYPDATTREELAVQCSLKEERVE 154
>gi|297277474|ref|XP_001113415.2| PREDICTED: cone-rod homeobox protein [Macaca mulatta]
Length = 356
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
Query: 1 MRIATGASMVAVAYPNLYPGYMTHAAATIAAMAASQHSAPP----PKRKRRHRTIFTEEQ 56
+ A+ + + +AY N P Y +A A H A P P+++RR RT FT Q
Sbjct: 48 LTWASASPKIMMAYMNPGPHYSVNALALSGPSVDLMHQAVPYPSAPRKQRRERTTFTRSQ 107
Query: 57 LEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
LE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 108 LEELEALFAKTQYPDVYAREEVALKINLPESRVQ 141
>gi|45384496|ref|NP_990662.1| homeobox protein goosecoid [Gallus gallus]
gi|1708052|sp|P53545.1|GSC_CHICK RecName: Full=Homeobox protein goosecoid
gi|402581|emb|CAA49897.1| chicken goosecoid [Gallus gallus]
Length = 245
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA KV L+EE+VE
Sbjct: 148 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVE 195
>gi|153791510|ref|NP_001093429.1| homeobox protein goosecoid [Oryctolagus cuniculus]
gi|133918273|emb|CAJ85785.1| goosecoid [Oryctolagus cuniculus]
Length = 260
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA KV L+EE+VE
Sbjct: 162 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVE 209
>gi|402906113|ref|XP_003915850.1| PREDICTED: cone-rod homeobox protein [Papio anubis]
Length = 378
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
Query: 1 MRIATGASMVAVAYPNLYPGYMTHAAATIAAMAASQHSAPP----PKRKRRHRTIFTEEQ 56
+ A+ + + +AY N P Y +A A H A P P+++RR RT FT Q
Sbjct: 70 LTWASASPKIMMAYMNPGPHYSVNALALSGPSVDLMHQAVPYPSAPRKQRRERTTFTRSQ 129
Query: 57 LEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
LE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 130 LEELEALFAKTQYPDVYAREEVALKINLPESRVQ 163
>gi|786602|gb|AAB31968.1| goosecoid homeobox protein=transcription factor [human, leukocytes,
Peptide, 252 aa]
Length = 252
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA KV L+EE+VE
Sbjct: 153 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVE 200
>gi|426248553|ref|XP_004018027.1| PREDICTED: homeobox protein goosecoid [Ovis aries]
Length = 257
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA KV L+EE+VE
Sbjct: 159 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVE 206
>gi|300798232|ref|NP_001179315.1| homeobox protein goosecoid [Bos taurus]
gi|296475301|tpg|DAA17416.1| TPA: goosecoid homeobox-like [Bos taurus]
Length = 257
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA KV L+EE+VE
Sbjct: 159 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVE 206
>gi|18858779|ref|NP_571092.1| homeobox protein goosecoid [Danio rerio]
gi|1708051|sp|P53544.1|GSC_DANRE RecName: Full=Homeobox protein goosecoid; AltName: Full=ZGSC
gi|214986|gb|AAA50030.1| homeodomain protein [Danio rerio]
gi|51859000|gb|AAH81381.1| Goosecoid [Danio rerio]
gi|182889428|gb|AAI65085.1| Gsc protein [Danio rerio]
Length = 240
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA KV L+EE+VE
Sbjct: 144 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVE 191
>gi|385152875|gb|AFI43813.1| goosecoid, partial [Bos taurus]
Length = 251
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA KV L+EE+VE
Sbjct: 155 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVE 202
>gi|410931541|ref|XP_003979154.1| PREDICTED: homeobox protein goosecoid-like, partial [Takifugu
rubripes]
Length = 139
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA KV L+EE+VE
Sbjct: 48 RRKRRHRTIFTDEQLEALEGLFQETKYPDVGTREQLARKVHLREEKVE 95
>gi|297660258|gb|ADI49713.1| goosecoid-like protein [Crepidula fornicata]
Length = 45
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/39 (92%), Positives = 36/39 (92%)
Query: 52 FTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
FTEEQLEQLEATF KTHYPDV LRE LALKVDLKEERVE
Sbjct: 3 FTEEQLEQLEATFHKTHYPDVQLREDLALKVDLKEERVE 41
>gi|395504575|ref|XP_003756623.1| PREDICTED: homeobox protein goosecoid [Sarcophilus harrisii]
Length = 250
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA +V L+EE+VE
Sbjct: 153 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARRVHLREEKVE 200
>gi|326920974|ref|XP_003206740.1| PREDICTED: homeobox protein goosecoid-like [Meleagris gallopavo]
Length = 246
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA +V L+EE+VE
Sbjct: 149 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARRVHLREEKVE 196
>gi|196166491|gb|ACG70804.1| goosecoid [Convolutriloba longifissura]
Length = 422
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFTEEQL++LE F K HYP VV RE +A K+ LKEERVE
Sbjct: 290 RRKRRHRTIFTEEQLKELEQAFLKCHYPGVVTREAVAHKLSLKEERVE 337
>gi|260791956|ref|XP_002590993.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
gi|229276193|gb|EEN47004.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
Length = 320
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
K+KRR+RT FT QLE++E F+KTHYPDV +REQLAL+ DL E RV+
Sbjct: 117 KKKRRNRTTFTSFQLEEMERVFQKTHYPDVYMREQLALRADLTEARVQ 164
>gi|126290304|ref|XP_001367970.1| PREDICTED: homeobox protein goosecoid-like [Monodelphis domestica]
Length = 250
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA +V L+EE+VE
Sbjct: 153 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARRVHLREEKVE 200
>gi|148222011|ref|NP_001079116.1| ALX homeobox protein 1 [Xenopus laevis]
gi|3023596|sp|Q91574.1|ALX1_XENLA RecName: Full=ALX homeobox protein 1; AltName: Full=Cartilage
homeoprotein 1; Short=CART-1; AltName: Full=XCART1
gi|557062|gb|AAA50368.1| cartilage homeoprotein 1 precursor [Xenopus laevis]
Length = 335
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 47/85 (55%)
Query: 6 GASMVAVAYPNLYPGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFE 65
G SM + PG + + S +KRRHRT FT QLE+LE F+
Sbjct: 102 GRSMDTCCSLAVSPGKSMADKVELDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQ 161
Query: 66 KTHYPDVVLREQLALKVDLKEERVE 90
KTHYPDV +REQLAL+ +L E RV+
Sbjct: 162 KTHYPDVYVREQLALRTELTEARVQ 186
>gi|308506004|ref|XP_003115185.1| CRE-CEH-45 protein [Caenorhabditis remanei]
gi|308259367|gb|EFP03320.1| CRE-CEH-45 protein [Caenorhabditis remanei]
Length = 236
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIF+EEQL LE TF THYPD RE+LA++ LKEERVE
Sbjct: 111 RRKRRHRTIFSEEQLHILETTFSSTHYPDASTREELAVQCSLKEERVE 158
>gi|268569198|ref|XP_002640457.1| C. briggsae CBR-CEH-45 protein [Caenorhabditis briggsae]
Length = 225
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIF+EEQL LE TF THYPD RE+LA++ LKEERVE
Sbjct: 110 RRKRRHRTIFSEEQLNILETTFSSTHYPDASTREELAVQCALKEERVE 157
>gi|440892621|gb|ELR45732.1| Cone-rod homeobox protein [Bos grunniens mutus]
Length = 306
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 22 MTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALK 81
+ H A + + A+S AP +++RR RT FT QLE+LEA F KT YPDV RE++ALK
Sbjct: 25 LMHPAVSYPSKASSPRGAP--RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALK 82
Query: 82 VDLKEERVE 90
++L E RV+
Sbjct: 83 INLPESRVQ 91
>gi|2828716|gb|AAC00193.1| amphioxus Otx transcription factor [Branchiostoma floridae]
Length = 322
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 40/51 (78%)
Query: 40 PPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PPP+++RR RT FT QL+ LEA F KT YPD+ +RE++ALK++L E RV+
Sbjct: 51 PPPRKQRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQ 101
>gi|89268286|emb|CAJ82436.1| goosecoid [Xenopus (Silurana) tropicalis]
Length = 292
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA +V L+EE+VE
Sbjct: 195 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARRVHLREEKVE 242
>gi|164519071|ref|NP_001106801.1| cone-rod homeobox protein isoform 2 [Mus musculus]
Length = 323
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 10 VAVAYPNLYPGYMTHAAATIAAMAASQHSAPP----PKRKRRHRTIFTEEQLEQLEATFE 65
+ +AY N P Y +A A H A P P+++RR RT FT QLE+LEA F
Sbjct: 24 IMMAYMNPGPHYSVNALALSGPNVDLMHQAVPYSSAPRKQRRERTTFTRSQLEELEALFA 83
Query: 66 KTHYPDVVLREQLALKVDLKEERVE 90
KT YPDV RE++ALK++L E RV+
Sbjct: 84 KTQYPDVYAREEVALKINLPESRVQ 108
>gi|213624006|gb|AAI70518.1| Unknown (protein for MGC:197245) [Xenopus laevis]
gi|213625396|gb|AAI70520.1| Unknown (protein for MGC:197247) [Xenopus laevis]
Length = 335
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 47/85 (55%)
Query: 6 GASMVAVAYPNLYPGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFE 65
G SM + PG + + S +KRRHRT FT QLE+LE F+
Sbjct: 102 GRSMETCCSLAVSPGKSMADKVELDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQ 161
Query: 66 KTHYPDVVLREQLALKVDLKEERVE 90
KTHYPDV +REQLAL+ +L E RV+
Sbjct: 162 KTHYPDVYVREQLALRTELTEARVQ 186
>gi|115702398|ref|XP_785238.2| PREDICTED: homeobox protein aristaless-like 4-like
[Strongylocentrotus purpuratus]
Length = 353
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRR+RT FT QLE++E F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 104 RKKRRNRTTFTSFQLEEMEKVFQKTHYPDVYCREQLALRCDLTEARVQ 151
>gi|327259076|ref|XP_003214364.1| PREDICTED: homeobox protein goosecoid-like [Anolis carolinensis]
Length = 227
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA +V L+EE+VE
Sbjct: 130 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARRVHLREEKVE 177
>gi|148231239|ref|NP_001081278.1| homeobox protein goosecoid isoform B [Xenopus laevis]
gi|166157903|ref|NP_001107361.1| uncharacterized protein LOC100135186 [Xenopus (Silurana)
tropicalis]
gi|1708050|sp|P53546.1|GSCB_XENLA RecName: Full=Homeobox protein goosecoid isoform B
gi|214186|gb|AAA49729.1| homeobox protein [Xenopus laevis]
gi|51261943|gb|AAH79970.1| LOC397748 protein [Xenopus laevis]
gi|113197730|gb|AAI21521.1| LOC100135186 protein [Xenopus (Silurana) tropicalis]
gi|163916027|gb|AAI57209.1| LOC100135186 protein [Xenopus (Silurana) tropicalis]
Length = 243
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA +V L+EE+VE
Sbjct: 146 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARRVHLREEKVE 193
>gi|62859751|ref|NP_001016704.1| goosecoid homeobox [Xenopus (Silurana) tropicalis]
gi|68448558|gb|AAY96798.1| goosecoid [Xenopus (Silurana) tropicalis]
gi|213624234|gb|AAI70819.1| goosecoid homeobox [Xenopus (Silurana) tropicalis]
gi|213627157|gb|AAI70823.1| goosecoid homeobox [Xenopus (Silurana) tropicalis]
Length = 243
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA +V L+EE+VE
Sbjct: 146 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARRVHLREEKVE 193
>gi|27652619|gb|AAO17709.1| homeodomain protein goosecoid [Rattus norvegicus]
Length = 124
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA KV L+EE+VE
Sbjct: 77 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVE 124
>gi|444730645|gb|ELW71020.1| Cone-rod homeobox protein [Tupaia chinensis]
Length = 315
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 10 VAVAYPNLYPGYMTHAAATIAAMAASQHSAPP----PKRKRRHRTIFTEEQLEQLEATFE 65
+ +AY N P Y +A A H A P P+++RR RT FT QLE+LEA F
Sbjct: 16 IMMAYMNPGPHYSVNALALSGPSVDLMHQAVPYPSAPRKQRRERTTFTRSQLEELEALFA 75
Query: 66 KTHYPDVVLREQLALKVDLKEERVE 90
KT YPDV RE++ALK++L E RV+
Sbjct: 76 KTQYPDVYAREEVALKINLPESRVQ 100
>gi|1708049|sp|P29454.2|GSCA_XENLA RecName: Full=Homeobox protein goosecoid isoform A
Length = 243
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA +V L+EE+VE
Sbjct: 146 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARRVHLREEKVE 193
>gi|160774168|gb|AAI55020.1| gsc protein [Xenopus (Silurana) tropicalis]
Length = 226
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA +V L+EE+VE
Sbjct: 129 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARRVHLREEKVE 176
>gi|238863850|gb|ACR66219.1| transcription factor Otx, partial [Branchiostoma belcheri]
Length = 241
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 43/61 (70%)
Query: 30 AAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERV 89
+A + PPP+++RR RT FT QL+ LEA F KT YPD+ +RE++ALK++L E RV
Sbjct: 29 SAYTVTGQCPPPPRKQRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRV 88
Query: 90 E 90
+
Sbjct: 89 Q 89
>gi|190608778|gb|ACE79720.1| Otx transcription factor [Branchiostoma lanceolatum]
Length = 319
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 40/51 (78%)
Query: 40 PPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PPP+++RR RT FT QL+ LEA F KT YPD+ +RE++ALK++L E RV+
Sbjct: 49 PPPRKQRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQ 99
>gi|214245|gb|AAA49744.1| homeobox gene; putative, partial [Xenopus laevis]
Length = 293
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA +V L+EE+VE
Sbjct: 196 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARRVHLREEKVE 243
>gi|260831450|ref|XP_002610672.1| hypothetical protein BRAFLDRAFT_275923 [Branchiostoma floridae]
gi|229296039|gb|EEN66682.1| hypothetical protein BRAFLDRAFT_275923 [Branchiostoma floridae]
Length = 322
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 40/51 (78%)
Query: 40 PPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PPP+++RR RT FT QL+ LEA F KT YPD+ +RE++ALK++L E RV+
Sbjct: 51 PPPRKQRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQ 101
>gi|395820130|ref|XP_003783428.1| PREDICTED: ALX homeobox protein 1 [Otolemur garnettii]
Length = 326
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%)
Query: 17 LYPGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLRE 76
+ PG + + S +KRRHRT FT QLE+LE F+KTHYPDV +RE
Sbjct: 104 MSPGKGIQEKGELDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVRE 163
Query: 77 QLALKVDLKEERVE 90
QLAL+ +L E RV+
Sbjct: 164 QLALRTELTEARVQ 177
>gi|11177896|ref|NP_068627.1| cone-rod homeobox protein [Rattus norvegicus]
gi|7384988|gb|AAF61630.1|AF135838_1 homeodomain protein CRX [Rattus norvegicus]
Length = 299
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 12 VAYPNLYPGYMTHAAATIAAMAASQHSAPP----PKRKRRHRTIFTEEQLEQLEATFEKT 67
+AY N P Y +A A H A P P+++RR RT FT QLE+LEA F KT
Sbjct: 2 MAYMNPGPHYSVNALALSGPSVDLMHQAVPYSSAPRKQRRERTTFTRSQLEELEALFAKT 61
Query: 68 HYPDVVLREQLALKVDLKEERVE 90
YPDV RE++ALK++L E RV+
Sbjct: 62 QYPDVYAREEVALKINLPESRVQ 84
>gi|157817310|ref|NP_001102316.1| homeobox protein goosecoid-2 [Rattus norvegicus]
gi|149019764|gb|EDL77912.1| goosecoid-like (predicted) [Rattus norvegicus]
Length = 214
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 26 AATIAAMAASQHSAPPPKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDL 84
A + + A + S P P+R+ RRHRTIF+EEQL+ LEA F + YPDV RE+LA+++ L
Sbjct: 116 APSTGSPALTGTSGPGPQRRTRRHRTIFSEEQLQALEALFVQNQYPDVGTRERLAVRIRL 175
Query: 85 KEERVE 90
+EERVE
Sbjct: 176 REERVE 181
>gi|449504490|ref|XP_002200597.2| PREDICTED: LOW QUALITY PROTEIN: homeobox protein goosecoid
[Taeniopygia guttata]
Length = 220
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA +V L+EE+VE
Sbjct: 123 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARRVHLREEKVE 170
>gi|4557489|ref|NP_000545.1| cone-rod homeobox protein [Homo sapiens]
gi|426389410|ref|XP_004061116.1| PREDICTED: cone-rod homeobox protein [Gorilla gorilla gorilla]
gi|3287764|sp|O43186.1|CRX_HUMAN RecName: Full=Cone-rod homeobox protein
gi|2665534|gb|AAB88418.1| cone rod homeobox protein [Homo sapiens]
gi|16741738|gb|AAH16664.1| CRX protein [Homo sapiens]
gi|30583567|gb|AAP36028.1| cone-rod homeobox [Homo sapiens]
gi|31565779|gb|AAH53672.1| CRX protein [Homo sapiens]
gi|60654681|gb|AAX31905.1| cone-rod homeobox [synthetic construct]
gi|60654683|gb|AAX31906.1| cone-rod homeobox [synthetic construct]
gi|119577919|gb|EAW57515.1| cone-rod homeobox [Homo sapiens]
gi|123993777|gb|ABM84490.1| cone-rod homeobox [synthetic construct]
gi|123995127|gb|ABM85165.1| cone-rod homeobox [synthetic construct]
gi|261861636|dbj|BAI47340.1| cone-rod homeobox protein [synthetic construct]
gi|355755985|gb|EHH59732.1| hypothetical protein EGM_09919 [Macaca fascicularis]
Length = 299
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 12 VAYPNLYPGYMTHAAATIAAMAASQHSAPP----PKRKRRHRTIFTEEQLEQLEATFEKT 67
+AY N P Y +A A H A P P+++RR RT FT QLE+LEA F KT
Sbjct: 2 MAYMNPGPHYSVNALALSGPSVDLMHQAVPYPSAPRKQRRERTTFTRSQLEELEALFAKT 61
Query: 68 HYPDVVLREQLALKVDLKEERVE 90
YPDV RE++ALK++L E RV+
Sbjct: 62 QYPDVYAREEVALKINLPESRVQ 84
>gi|2696705|dbj|BAA24005.1| goosecoid [Cynops pyrrhogaster]
Length = 248
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA +V L+EE+VE
Sbjct: 151 RRKRRHRTIFTDEQLEALEHLFQETKYPDVGTREQLARRVHLREEKVE 198
>gi|351697963|gb|EHB00882.1| Cone-rod homeobox protein [Heterocephalus glaber]
Length = 299
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 12 VAYPNLYPGYMTHAAATIAAMAASQHSAPP----PKRKRRHRTIFTEEQLEQLEATFEKT 67
+AY N P Y +A A H A P P+++RR RT FT QLE+LEA F KT
Sbjct: 2 MAYMNPGPHYSVNALALSGPSVDLMHQAVPYPSVPRKQRRERTTFTRSQLEELEALFAKT 61
Query: 68 HYPDVVLREQLALKVDLKEERVE 90
YPDV RE++ALK++L E RV+
Sbjct: 62 QYPDVYAREEVALKINLPESRVQ 84
>gi|348557712|ref|XP_003464663.1| PREDICTED: cone-rod homeobox protein-like isoform 1 [Cavia
porcellus]
gi|348557714|ref|XP_003464664.1| PREDICTED: cone-rod homeobox protein-like isoform 2 [Cavia
porcellus]
Length = 301
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 12 VAYPNLYPGYMTHAAATIAAMAASQHSAPP----PKRKRRHRTIFTEEQLEQLEATFEKT 67
+AY N P Y +A A H A P P+++RR RT FT QLE+LEA F KT
Sbjct: 2 MAYMNPGPHYSVNALALSGPSVDLMHQAVPYPSAPRKQRRERTTFTRSQLEELEALFAKT 61
Query: 68 HYPDVVLREQLALKVDLKEERVE 90
YPDV RE++ALK++L E RV+
Sbjct: 62 QYPDVYAREEVALKINLPESRVQ 84
>gi|6681029|ref|NP_031796.1| cone-rod homeobox protein isoform 1 [Mus musculus]
gi|3287765|sp|O54751.1|CRX_MOUSE RecName: Full=Cone-rod homeobox protein
gi|2665517|gb|AAB88585.1| homeodomain protein [Mus musculus]
gi|16741347|gb|AAH16502.1| Cone-rod homeobox containing gene [Mus musculus]
gi|26343523|dbj|BAC35418.1| unnamed protein product [Mus musculus]
gi|74137945|dbj|BAE24107.1| unnamed protein product [Mus musculus]
gi|148710176|gb|EDL42122.1| cone-rod homeobox containing gene [Mus musculus]
Length = 299
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 12 VAYPNLYPGYMTHAAATIAAMAASQHSAPP----PKRKRRHRTIFTEEQLEQLEATFEKT 67
+AY N P Y +A A H A P P+++RR RT FT QLE+LEA F KT
Sbjct: 2 MAYMNPGPHYSVNALALSGPNVDLMHQAVPYSSAPRKQRRERTTFTRSQLEELEALFAKT 61
Query: 68 HYPDVVLREQLALKVDLKEERVE 90
YPDV RE++ALK++L E RV+
Sbjct: 62 QYPDVYAREEVALKINLPESRVQ 84
>gi|355703714|gb|EHH30205.1| hypothetical protein EGK_10822 [Macaca mulatta]
Length = 299
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 12 VAYPNLYPGYMTHAAATIAAMAASQHSAPP----PKRKRRHRTIFTEEQLEQLEATFEKT 67
+AY N P Y +A A H A P P+++RR RT FT QLE+LEA F KT
Sbjct: 2 MAYMNPGPHYSVNALALSGPSVDLMHQAVPYPSAPRKQRRERTTFTRSQLEELEALFAKT 61
Query: 68 HYPDVVLREQLALKVDLKEERVE 90
YPDV RE++ALK++L E RV+
Sbjct: 62 QYPDVYAREEVALKINLPESRVQ 84
>gi|113682307|ref|NP_001038539.1| ALX homeobox protein 1 [Danio rerio]
gi|94732446|emb|CAK11128.1| novel protein similar to vertebrate cartilage paired-class
homeoprotein 1 (CART1) [Danio rerio]
Length = 320
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLA++ +L E RV+
Sbjct: 119 KKRRHRTTFTSAQLEELEKVFQKTHYPDVYVREQLAMRTELTEARVQ 165
>gi|214982|gb|AAA50028.1| homeodomain protein, partial [Danio rerio]
Length = 135
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA KV L+EE+VE
Sbjct: 39 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVE 86
>gi|432918406|ref|XP_004079609.1| PREDICTED: ALX homeobox protein 1-like [Oryzias latipes]
Length = 326
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLA++ +L E RV+
Sbjct: 123 KKRRHRTTFTSAQLEELEKVFQKTHYPDVYVREQLAMRTELTEARVQ 169
>gi|440907258|gb|ELR57422.1| Homeobox protein goosecoid, partial [Bos grunniens mutus]
Length = 142
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA KV L+EE+VE
Sbjct: 44 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVE 91
>gi|348554471|ref|XP_003463049.1| PREDICTED: homeobox protein goosecoid-like [Cavia porcellus]
Length = 228
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA KV L+EE+VE
Sbjct: 129 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVE 176
>gi|348523389|ref|XP_003449206.1| PREDICTED: ALX homeobox protein 1-like isoform 2 [Oreochromis
niloticus]
Length = 318
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLA++ +L E RV+
Sbjct: 118 KKRRHRTTFTSAQLEELEKVFQKTHYPDVYVREQLAMRTELTEARVQ 164
>gi|149636900|ref|XP_001511401.1| PREDICTED: homeobox protein goosecoid-like [Ornithorhynchus
anatinus]
Length = 166
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA +V L+EE+VE
Sbjct: 69 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARRVHLREEKVE 116
>gi|47230477|emb|CAF99670.1| unnamed protein product [Tetraodon nigroviridis]
Length = 263
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 68 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 114
>gi|348523387|ref|XP_003449205.1| PREDICTED: ALX homeobox protein 1-like isoform 1 [Oreochromis
niloticus]
Length = 323
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLA++ +L E RV+
Sbjct: 123 KKRRHRTTFTSAQLEELEKVFQKTHYPDVYVREQLAMRTELTEARVQ 169
>gi|122053935|gb|ABM65960.1| GSC [Ateles geoffroyi]
Length = 138
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA KV L+EE+VE
Sbjct: 39 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVE 86
>gi|297705321|ref|XP_002829527.1| PREDICTED: cone-rod homeobox protein-like, partial [Pongo abelii]
Length = 86
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 12 VAYPNLYPGYMTHAAATIAAMAASQHSAPP----PKRKRRHRTIFTEEQLEQLEATFEKT 67
+AY N P Y +A A H A P P+++RR RT FT QLE+LEA F KT
Sbjct: 2 MAYMNPGPHYSVNALALSGPSVDLMHQAVPYPSAPRKQRRERTTFTRSQLEELEALFAKT 61
Query: 68 HYPDVVLREQLALKVDLKEERVE 90
YPDV RE++ALK++L E RV+
Sbjct: 62 QYPDVYAREEVALKINLPESRVQ 84
>gi|301604045|ref|XP_002931669.1| PREDICTED: ALX homeobox protein 1-like [Xenopus (Silurana)
tropicalis]
Length = 326
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLAL+ +L E RV+
Sbjct: 131 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 177
>gi|122934974|gb|ABM68241.1| GSC [Lagothrix lagotricha]
Length = 138
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA KV L+EE+VE
Sbjct: 39 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVE 86
>gi|327272822|ref|XP_003221183.1| PREDICTED: ALX homeobox protein 1-like [Anolis carolinensis]
Length = 331
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLAL+ +L E RV+
Sbjct: 136 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 182
>gi|148233818|ref|NP_001082826.1| aristaless-like homeobox 4 [Danio rerio]
gi|134025313|gb|AAI35030.1| Zgc:162606 protein [Danio rerio]
Length = 364
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 170 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 216
>gi|348509621|ref|XP_003442346.1| PREDICTED: homeobox protein aristaless-like 4-like [Oreochromis
niloticus]
Length = 373
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 178 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 224
>gi|355002395|gb|AER51822.1| cone-rod homeobox, partial [Rhinolophus pearsonii]
Length = 278
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 39/49 (79%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L+E RV+
Sbjct: 28 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLRESRVQ 76
>gi|351701181|gb|EHB04100.1| Homeobox protein goosecoid, partial [Heterocephalus glaber]
Length = 153
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA KV L+EE+VE
Sbjct: 52 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVE 99
>gi|26352187|dbj|BAC39730.1| unnamed protein product [Mus musculus]
Length = 320
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLAL+ +L E RV+
Sbjct: 125 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 171
>gi|410908673|ref|XP_003967815.1| PREDICTED: ALX homeobox protein 1-like [Takifugu rubripes]
Length = 320
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLA++ +L E RV+
Sbjct: 118 KKRRHRTTFTSAQLEELEKVFQKTHYPDVYVREQLAMRTELTEARVQ 164
>gi|351706553|gb|EHB09472.1| ALX homeobox protein 1 [Heterocephalus glaber]
Length = 327
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLAL+ +L E RV+
Sbjct: 132 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 178
>gi|194226627|ref|XP_001493780.2| PREDICTED: ALX homeobox protein 1 [Equus caballus]
Length = 326
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLAL+ +L E RV+
Sbjct: 131 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 177
>gi|296212490|ref|XP_002752854.1| PREDICTED: ALX homeobox protein 1 [Callithrix jacchus]
Length = 326
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLAL+ +L E RV+
Sbjct: 131 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 177
>gi|301782565|ref|XP_002926696.1| PREDICTED: ALX homeobox protein 1-like [Ailuropoda melanoleuca]
gi|281346099|gb|EFB21683.1| hypothetical protein PANDA_016388 [Ailuropoda melanoleuca]
Length = 326
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLAL+ +L E RV+
Sbjct: 131 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 177
>gi|332221029|ref|XP_003259660.1| PREDICTED: ALX homeobox protein 1 [Nomascus leucogenys]
Length = 326
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLAL+ +L E RV+
Sbjct: 131 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 177
>gi|291389679|ref|XP_002711420.1| PREDICTED: cartilage paired-class homeoprotein 1 [Oryctolagus
cuniculus]
Length = 326
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLAL+ +L E RV+
Sbjct: 131 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 177
>gi|431892095|gb|ELK02542.1| ALX homeobox protein 1 [Pteropus alecto]
Length = 326
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLAL+ +L E RV+
Sbjct: 131 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 177
>gi|71892442|ref|NP_001025475.1| homeobox protein aristaless-like 4 [Bos taurus]
gi|109940203|sp|Q4LAL6.1|ALX4_BOVIN RecName: Full=Homeobox protein aristaless-like 4
gi|70561331|emb|CAJ14976.1| aristaless-like homeobox 4 [Bos taurus]
Length = 397
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 199 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 245
>gi|355693544|gb|EHH28147.1| hypothetical protein EGK_18508, partial [Macaca mulatta]
Length = 141
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA KV L+EE+VE
Sbjct: 40 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVE 87
>gi|354488799|ref|XP_003506553.1| PREDICTED: ALX homeobox protein 1 [Cricetulus griseus]
Length = 326
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLAL+ +L E RV+
Sbjct: 131 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 177
>gi|403272040|ref|XP_003927898.1| PREDICTED: ALX homeobox protein 1 [Saimiri boliviensis boliviensis]
Length = 326
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLAL+ +L E RV+
Sbjct: 131 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 177
>gi|390458596|ref|XP_003732149.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein goosecoid-2
[Callithrix jacchus]
Length = 204
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 5/85 (5%)
Query: 10 VAVAYPNLY----PGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFE 65
V +A+P + P + A+ + A+ + P +R RRHRTIF+EEQL+ LEA F
Sbjct: 87 VRLAWPLMLGPAVPLSLGRASGVLGALPGAVGQGPQ-RRTRRHRTIFSEEQLQALEALFV 145
Query: 66 KTHYPDVVLREQLALKVDLKEERVE 90
+ YPDV RE+LA ++ L+EERVE
Sbjct: 146 QNQYPDVGTRERLAGRIRLREERVE 170
>gi|402886991|ref|XP_003906892.1| PREDICTED: ALX homeobox protein 1 [Papio anubis]
gi|355786349|gb|EHH66532.1| Cartilage homeoprotein 1 [Macaca fascicularis]
Length = 326
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLAL+ +L E RV+
Sbjct: 131 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 177
>gi|300796276|ref|NP_001179220.1| ALX homeobox protein 1 [Bos taurus]
gi|426224245|ref|XP_004006284.1| PREDICTED: ALX homeobox protein 1 [Ovis aries]
gi|296487990|tpg|DAA30103.1| TPA: ALX homeobox protein 1-like [Bos taurus]
Length = 326
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLAL+ +L E RV+
Sbjct: 131 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 177
>gi|154813201|ref|NP_008913.2| ALX homeobox protein 1 [Homo sapiens]
gi|114646088|ref|XP_509250.2| PREDICTED: ALX homeobox protein 1 [Pan troglodytes]
gi|397480872|ref|XP_003811689.1| PREDICTED: ALX homeobox protein 1 [Pan paniscus]
gi|90111820|sp|Q15699.2|ALX1_HUMAN RecName: Full=ALX homeobox protein 1; AltName: Full=Cartilage
homeoprotein 1; Short=CART-1
gi|15012050|gb|AAH10923.1| ALX homeobox 1 [Homo sapiens]
gi|46946691|emb|CAD90155.1| cartilage paired-class homeoprotein 1 [Homo sapiens]
gi|61363409|gb|AAX42385.1| cartilage paired-class homeoprotein 1 [synthetic construct]
gi|119617804|gb|EAW97398.1| cartilage paired-class homeoprotein 1 [Homo sapiens]
Length = 326
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLAL+ +L E RV+
Sbjct: 131 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 177
>gi|410965202|ref|XP_003989139.1| PREDICTED: ALX homeobox protein 1 [Felis catus]
Length = 326
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLAL+ +L E RV+
Sbjct: 131 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 177
>gi|126332676|ref|XP_001368029.1| PREDICTED: homeobox protein aristaless-like 4-like [Monodelphis
domestica]
Length = 417
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 220 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 266
>gi|6978601|ref|NP_037053.1| ALX homeobox protein 1 [Rattus norvegicus]
gi|3023581|sp|Q63087.1|ALX1_RAT RecName: Full=ALX homeobox protein 1; AltName: Full=Cartilage
homeoprotein 1; Short=CART-1
gi|413751|gb|AAA40877.1| homeoprotein 1 [Rattus norvegicus]
gi|149067054|gb|EDM16787.1| cartilage homeo protein 1, isoform CRA_a [Rattus norvegicus]
gi|149067055|gb|EDM16788.1| cartilage homeo protein 1, isoform CRA_a [Rattus norvegicus]
gi|165970652|gb|AAI58592.1| ALX homeobox 1 [Rattus norvegicus]
Length = 326
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLAL+ +L E RV+
Sbjct: 131 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 177
>gi|73982544|ref|XP_850737.1| PREDICTED: ALX homeobox 4 isoform 1 [Canis lupus familiaris]
Length = 414
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 216 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 262
>gi|27369774|ref|NP_766141.1| ALX homeobox protein 1 [Mus musculus]
gi|67460551|sp|Q8C8B0.1|ALX1_MOUSE RecName: Full=ALX homeobox protein 1; AltName: Full=Cartilage
homeoprotein 1; Short=CART-1
gi|26339004|dbj|BAC33173.1| unnamed protein product [Mus musculus]
gi|30353921|gb|AAH52200.1| ALX homeobox 1 [Mus musculus]
gi|148689727|gb|EDL21674.1| cartilage homeo protein 1 [Mus musculus]
Length = 326
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLAL+ +L E RV+
Sbjct: 131 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 177
>gi|1098654|gb|AAB08960.1| Cart-1 [Homo sapiens]
Length = 326
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLAL+ +L E RV+
Sbjct: 131 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 177
>gi|355564508|gb|EHH21008.1| Cartilage homeoprotein 1 [Macaca mulatta]
Length = 326
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLAL+ +L E RV+
Sbjct: 131 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 177
>gi|440898843|gb|ELR50257.1| ALX homeobox protein 1 [Bos grunniens mutus]
Length = 326
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLAL+ +L E RV+
Sbjct: 131 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 177
>gi|291384886|ref|XP_002709113.1| PREDICTED: aristaless-like homeobox 4-like [Oryctolagus cuniculus]
Length = 397
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 199 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 245
>gi|410973607|ref|XP_003993239.1| PREDICTED: homeobox protein aristaless-like 4 [Felis catus]
Length = 408
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 210 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 256
>gi|345780690|ref|XP_539704.3| PREDICTED: ALX homeobox protein 1 [Canis lupus familiaris]
Length = 265
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%)
Query: 17 LYPGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLRE 76
+ PG + + S +KRRHRT FT QLE+LE F+KTHYPDV +RE
Sbjct: 43 MSPGKGMPEKGDLDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVRE 102
Query: 77 QLALKVDLKEERVE 90
QLAL+ +L E RV+
Sbjct: 103 QLALRTELTEARVQ 116
>gi|344266437|ref|XP_003405287.1| PREDICTED: ALX homeobox protein 1 [Loxodonta africana]
Length = 326
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLAL+ +L E RV+
Sbjct: 131 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 177
>gi|311256745|ref|XP_003126788.1| PREDICTED: ALX homeobox protein 1 [Sus scrofa]
Length = 326
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLAL+ +L E RV+
Sbjct: 131 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 177
>gi|195997517|ref|XP_002108627.1| hypothetical protein TRIADDRAFT_9391 [Trichoplax adhaerens]
gi|190589403|gb|EDV29425.1| hypothetical protein TRIADDRAFT_9391, partial [Trichoplax
adhaerens]
gi|197281978|gb|ACH57168.1| Gsc [Trichoplax adhaerens]
Length = 60
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 40/46 (86%)
Query: 45 KRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
KRRHRTIFT+EQ+ +LE +E+T YPDV +RE++A K+DLKEERVE
Sbjct: 1 KRRHRTIFTDEQIAELEKLYEQTQYPDVTMRERIAQKIDLKEERVE 46
>gi|440897881|gb|ELR49486.1| Homeobox protein aristaless-like 4, partial [Bos grunniens mutus]
Length = 385
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 187 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 233
>gi|157818677|ref|NP_001100023.1| homeobox protein aristaless-like 4 [Rattus norvegicus]
gi|149022700|gb|EDL79594.1| aristaless 4 (predicted) [Rattus norvegicus]
Length = 399
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 201 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 247
>gi|344281094|ref|XP_003412315.1| PREDICTED: homeobox protein aristaless-like 4-like [Loxodonta
africana]
Length = 406
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 208 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 254
>gi|6671541|ref|NP_031468.1| homeobox protein aristaless-like 4 [Mus musculus]
gi|13626102|sp|O35137.1|ALX4_MOUSE RecName: Full=Homeobox protein aristaless-like 4; AltName:
Full=ALX-4
gi|2352266|gb|AAC39943.1| paired-type homeodomain transcription factor [Mus musculus]
gi|148695681|gb|EDL27628.1| aristaless 4 [Mus musculus]
Length = 399
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 201 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 247
>gi|13774326|gb|AAK38835.1| aristaless-like homeobox 4 [Homo sapiens]
Length = 411
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 213 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 259
>gi|11125350|emb|CAC15060.1| homeodomain transcription factor ALX4 [Homo sapiens]
Length = 411
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 213 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 259
>gi|403254633|ref|XP_003920066.1| PREDICTED: homeobox protein aristaless-like 4 [Saimiri boliviensis
boliviensis]
Length = 394
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 196 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 242
>gi|344252001|gb|EGW08105.1| ALX homeobox protein 1 [Cricetulus griseus]
Length = 295
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLAL+ +L E RV+
Sbjct: 100 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 146
>gi|426368049|ref|XP_004051027.1| PREDICTED: homeobox protein aristaless-like 4 [Gorilla gorilla
gorilla]
Length = 409
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 211 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 257
>gi|407025359|gb|AFS65546.1| Alx1 [Patiria miniata]
Length = 393
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRR+RT FT QLE++E F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 106 RKKRRNRTTFTSFQLEEMERVFQKTHYPDVYCREQLALRCDLTEARVQ 153
>gi|119588472|gb|EAW68066.1| aristaless-like homeobox 4 [Homo sapiens]
Length = 411
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 213 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 259
>gi|14017793|dbj|BAB47417.1| KIAA1788 protein [Homo sapiens]
Length = 413
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 215 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 261
>gi|55743092|ref|NP_068745.2| homeobox protein aristaless-like 4 [Homo sapiens]
gi|254763249|sp|Q9H161.2|ALX4_HUMAN RecName: Full=Homeobox protein aristaless-like 4
gi|11125719|emb|CAC15120.1| homeodomain transcription factor ALX4 [Homo sapiens]
gi|168278961|dbj|BAG11360.1| aristaless-like homeobox 4 [synthetic construct]
gi|187252473|gb|AAI66622.1| ALX homeobox 4 [synthetic construct]
Length = 411
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 213 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 259
>gi|402893728|ref|XP_003910041.1| PREDICTED: homeobox protein aristaless-like 4 [Papio anubis]
Length = 409
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 211 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 257
>gi|355566588|gb|EHH22967.1| Homeobox protein aristaless-like 4 [Macaca mulatta]
Length = 409
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 211 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 257
>gi|109106654|ref|XP_001113643.1| PREDICTED: homeobox protein aristaless-like 4-like [Macaca mulatta]
Length = 409
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 211 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 257
>gi|3297938|emb|CAA76833.1| goosecoid protein [Sus scrofa]
Length = 109
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRTIFT+EQLE LE F++T YPDV REQLA KV L+EE+VE
Sbjct: 17 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVE 64
>gi|340375161|ref|XP_003386105.1| PREDICTED: hypothetical protein LOC100637124 [Amphimedon
queenslandica]
Length = 332
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 8 SMVAVAYPNLYPG-YMTHAAATIAAMAASQHSAPPPKRK---RRHRTIFTEEQLEQLEAT 63
S+ V PN + G Y+ H +A ++ P RK RRHRT FT QLE+LE
Sbjct: 91 SLATVHAPNSHAGMYLHHPSAGPMVPSSMSIGRSEPYRKGKQRRHRTNFTSHQLEELEKA 150
Query: 64 FEKTHYPDVVLREQLALKVDLKEERVE 90
FEKT YPDV +RE+LA+K+ L E RV+
Sbjct: 151 FEKTRYPDVFMREELAMKISLTEARVQ 177
>gi|7595811|gb|AAF64460.1|AF241310_1 transcription factor PaxB [Acropora millepora]
Length = 571
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 35/45 (77%)
Query: 46 RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
RR RT F+ EQ+EQLE TFEKTHYPDV RE+LA VDL E R++
Sbjct: 232 RRQRTTFSGEQIEQLEKTFEKTHYPDVFTREKLAQDVDLSEARIQ 276
>gi|116138649|gb|AAI25357.1| Goosecoid homebox 2 [Mus musculus]
Length = 201
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 50/73 (68%), Gaps = 3/73 (4%)
Query: 19 PGYMTHAAATIAAMAASQHSAPPPKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQ 77
P +T A A+ + S P P+R+ RRHRTIF+EEQL+ LEA F + YPDV RE+
Sbjct: 98 PSPLTAPRAGSPALTGT--SGPGPQRRTRRHRTIFSEEQLQALEALFVQNQYPDVGTRER 155
Query: 78 LALKVDLKEERVE 90
LA+++ L+EERVE
Sbjct: 156 LAVRIRLREERVE 168
>gi|395815567|ref|XP_003781297.1| PREDICTED: homeobox protein aristaless-like 4 [Otolemur garnettii]
Length = 407
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 211 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 257
>gi|10863749|gb|AAG23961.1|AF294629_1 aristaless-like 4 [Homo sapiens]
Length = 410
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 213 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 259
>gi|348558708|ref|XP_003465158.1| PREDICTED: homeobox protein aristaless-like 4-like [Cavia
porcellus]
Length = 407
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 209 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 255
>gi|198278511|ref|NP_083745.1| homeobox protein goosecoid-2 [Mus musculus]
gi|148665078|gb|EDK97494.1| mCG131842 [Mus musculus]
gi|161899638|gb|AAI32638.2| Gsc2 protein [Mus musculus]
Length = 214
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 50/73 (68%), Gaps = 3/73 (4%)
Query: 19 PGYMTHAAATIAAMAASQHSAPPPKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQ 77
P +T A A+ + S P P+R+ RRHRTIF+EEQL+ LEA F + YPDV RE+
Sbjct: 111 PSPLTAPRAGSPALTGT--SGPGPQRRTRRHRTIFSEEQLQALEALFVQNQYPDVGTRER 168
Query: 78 LALKVDLKEERVE 90
LA+++ L+EERVE
Sbjct: 169 LAVRIRLREERVE 181
>gi|395742860|ref|XP_002821892.2| PREDICTED: LOW QUALITY PROTEIN: homeobox protein aristaless-like 4
[Pongo abelii]
Length = 407
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 210 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 256
>gi|355002441|gb|AER51845.1| cone-rod homeobox, partial [Rhinophylla pumilio]
Length = 268
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 28 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 76
>gi|47224480|emb|CAG08730.1| unnamed protein product [Tetraodon nigroviridis]
Length = 249
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 54 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 100
>gi|7531132|sp|P56916.1|GSC2_MOUSE RecName: Full=Homeobox protein goosecoid-2; Short=GSC-2; AltName:
Full=Homeobox protein goosecoid-like; Short=GSC-L
Length = 198
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 50/73 (68%), Gaps = 3/73 (4%)
Query: 19 PGYMTHAAATIAAMAASQHSAPPPKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQ 77
P +T A A+ + S P P+R+ RRHRTIF+EEQL+ LEA F + YPDV RE+
Sbjct: 95 PSPLTAPRAGSPALTGT--SGPGPQRRTRRHRTIFSEEQLQALEALFVQNQYPDVGTRER 152
Query: 78 LALKVDLKEERVE 90
LA+++ L+EERVE
Sbjct: 153 LAVRIRLREERVE 165
>gi|4587213|dbj|BAA76666.1| cone-rod homeobox protein [Rattus norvegicus]
gi|149056921|gb|EDM08352.1| cone-rod homeobox protein [Rattus norvegicus]
Length = 299
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 12 VAYPNLYPGYMTHAAATIAAMAASQHSAPP----PKRKRRHRTIFTEEQLEQLEATFEKT 67
+ Y N P Y +A A H A P P+++RR RT FT QLE+LEA F KT
Sbjct: 2 MTYMNPGPHYSVNALALSGPSVDLMHQAVPYSSAPRKQRRERTTFTRSQLEELEALFAKT 61
Query: 68 HYPDVVLREQLALKVDLKEERVE 90
YPDV RE++ALK++L E RV+
Sbjct: 62 QYPDVYAREEVALKINLPESRVQ 84
>gi|407025361|gb|AFS65547.1| Alx1, partial [Parastichopus parvimensis]
Length = 311
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRR+RT FT QLE++E F++THYPDV +REQLAL+ DL E RV+
Sbjct: 108 RKKRRNRTTFTSFQLEEMEKVFQRTHYPDVYMREQLALRCDLTEARVQ 155
>gi|296479667|tpg|DAA21782.1| TPA: homeobox protein aristaless-like 4 [Bos taurus]
Length = 246
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 199 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 245
>gi|281344761|gb|EFB20345.1| hypothetical protein PANDA_019137 [Ailuropoda melanoleuca]
Length = 422
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 224 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 270
>gi|390470456|ref|XP_003734292.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein aristaless-like 4
[Callithrix jacchus]
Length = 415
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 217 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 263
>gi|444707558|gb|ELW48823.1| Homeobox protein aristaless-like 4 [Tupaia chinensis]
Length = 550
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 233 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 279
>gi|355002373|gb|AER51811.1| cone-rod homeobox, partial [Myotis davidii]
gi|355002375|gb|AER51812.1| cone-rod homeobox, partial [Myotis davidii]
Length = 285
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 28 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 76
>gi|355002391|gb|AER51820.1| cone-rod homeobox, partial [Tylonycteris pachypus]
Length = 270
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 28 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 76
>gi|355002443|gb|AER51846.1| cone-rod homeobox, partial [Cormura brevirostris]
Length = 285
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 28 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 76
>gi|354491350|ref|XP_003507818.1| PREDICTED: homeobox protein aristaless-like 4-like [Cricetulus
griseus]
Length = 319
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 121 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 167
>gi|350580147|ref|XP_003480752.1| PREDICTED: hypothetical protein LOC100738855, partial [Sus scrofa]
Length = 397
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 351 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 397
>gi|344269934|ref|XP_003406802.1| PREDICTED: cone-rod homeobox protein-like [Loxodonta africana]
Length = 299
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 36 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 84
>gi|355002455|gb|AER51852.1| cone-rod homeobox, partial [Saccopteryx bilineata]
Length = 285
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 28 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 76
>gi|355002423|gb|AER51836.1| cone-rod homeobox, partial [Taphozous melanopogon]
Length = 286
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 28 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 76
>gi|355002411|gb|AER51830.1| cone-rod homeobox, partial [Hipposideros larvatus]
Length = 285
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 28 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 76
>gi|355002473|gb|AER51861.1| cone-rod homeobox, partial [Rousettus leschenaultii]
Length = 268
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 28 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 76
>gi|355002393|gb|AER51821.1| cone-rod homeobox, partial [Tylonycteris robustula]
Length = 269
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 27 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 75
>gi|355002363|gb|AER51806.1| cone-rod homeobox, partial [Hipposideros armiger]
gi|355002419|gb|AER51834.1| cone-rod homeobox, partial [Hipposideros armiger]
Length = 285
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 28 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 76
>gi|355002469|gb|AER51859.1| cone-rod homeobox, partial [Rhinolophus marshalli]
Length = 255
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 28 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 76
>gi|355002365|gb|AER51807.1| cone-rod homeobox, partial [Rhinolophus sinicus]
Length = 278
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 28 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 76
>gi|350592672|ref|XP_001927461.3| PREDICTED: homeobox protein goosecoid-2-like [Sus scrofa]
Length = 204
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 25 AAATIAAMAASQHSAPPPKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVD 83
A++T + A +P P+R+ RRHRTIF+EEQL+ LEA F + YPDV RE+LA ++
Sbjct: 104 ASSTEGSGALPGAGSPGPQRRTRRHRTIFSEEQLQALEALFVQNQYPDVGTRERLAGRIR 163
Query: 84 LKEERVE 90
L+EERVE
Sbjct: 164 LREERVE 170
>gi|355002413|gb|AER51831.1| cone-rod homeobox, partial [Hipposideros larvatus]
Length = 285
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 28 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 76
>gi|355002425|gb|AER51837.1| cone-rod homeobox, partial [Taphozous melanopogon]
Length = 286
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 28 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 76
>gi|391345791|ref|XP_003747166.1| PREDICTED: homeobox protein aristaless-like [Metaseiulus
occidentalis]
Length = 317
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Query: 42 PKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PKRK RR+RT FT QLE+LE F KTHYPDV RE+LA++VDL E RV+
Sbjct: 50 PKRKQRRYRTTFTSYQLEELEKAFGKTHYPDVFTREELAMRVDLTEARVQ 99
>gi|355002457|gb|AER51853.1| cone-rod homeobox, partial [Glossophaga soricina]
Length = 285
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 28 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 76
>gi|345802097|ref|XP_854590.2| PREDICTED: uncharacterized protein LOC611786 [Canis lupus
familiaris]
Length = 782
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT F+ QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 591 KKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 637
>gi|355002399|gb|AER51824.1| cone-rod homeobox, partial [Rhinolophus pusillus]
Length = 278
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 28 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 76
>gi|332856451|ref|XP_524319.3| PREDICTED: tetra-peptide repeat homeobox protein 1 isoform 2 [Pan
troglodytes]
Length = 299
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 12 VAYPNLYPGYMTHAAATIAAMAASQHSAPP----PKRKRRHRTIFTEEQLEQLEATFEKT 67
+AY N P Y +A A H A P P+++RR RT FT QLE+LE F KT
Sbjct: 2 MAYMNPGPHYSVNALALSGPSVDLMHQAVPYPSAPRKQRRERTTFTRSQLEELETLFAKT 61
Query: 68 HYPDVVLREQLALKVDLKEERVE 90
YPDV RE++ALK++L E RV+
Sbjct: 62 QYPDVYAREEVALKINLPESRVQ 84
>gi|289583665|gb|ADD10737.1| cone-rod homeobox protein [Felis catus]
gi|289583667|gb|ADD10738.1| cone-rod homeobox protein [Felis catus]
Length = 299
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 36 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 84
>gi|403299132|ref|XP_003940344.1| PREDICTED: cone-rod homeobox protein [Saimiri boliviensis
boliviensis]
Length = 299
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 12 VAYPNLYPGYMTHAAATIAAMAASQHSAPP----PKRKRRHRTIFTEEQLEQLEATFEKT 67
+AY N P Y + A H A P P+++RR RT FT QLE+LEA F KT
Sbjct: 2 MAYMNPGPHYSVNTLALSGPSVDLMHQAVPYPSAPRKQRRERTTFTRSQLEELEALFAKT 61
Query: 68 HYPDVVLREQLALKVDLKEERVE 90
YPDV RE++ALK++L E RV+
Sbjct: 62 QYPDVYAREEVALKINLPESRVQ 84
>gi|355002389|gb|AER51819.1| cone-rod homeobox, partial [Eonycteris spelaea]
Length = 267
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 28 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 76
>gi|383848891|ref|XP_003700081.1| PREDICTED: uncharacterized protein LOC100883611 [Megachile
rotundata]
Length = 430
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 37/45 (82%)
Query: 46 RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
RRHRTIFT +QLE+LEA F++ HYPDV RE L+L+ DL E+R++
Sbjct: 190 RRHRTIFTSQQLEELEAAFKEAHYPDVYAREMLSLRTDLPEDRIQ 234
>gi|355002405|gb|AER51827.1| cone-rod homeobox, partial [Rhinolophus pusillus]
Length = 278
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 28 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 76
>gi|301765101|ref|XP_002917928.1| PREDICTED: cone-rod homeobox protein-like [Ailuropoda
melanoleuca]
gi|281348410|gb|EFB23994.1| hypothetical protein PANDA_006338 [Ailuropoda melanoleuca]
Length = 299
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 36 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 84
>gi|194217845|ref|XP_001915219.1| PREDICTED: hypothetical protein LOC100055958 [Equus caballus]
Length = 608
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 410 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 456
>gi|355002439|gb|AER51844.1| cone-rod homeobox, partial [Noctilio leporinus]
Length = 285
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 28 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 76
>gi|355002401|gb|AER51825.1| cone-rod homeobox, partial [Rhinolophus pusillus]
Length = 278
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 28 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 76
>gi|332836398|ref|XP_521895.3| PREDICTED: LOW QUALITY PROTEIN: homeobox protein aristaless-like 4
[Pan troglodytes]
Length = 410
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 212 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 258
>gi|301787271|ref|XP_002929051.1| PREDICTED: homeobox protein aristaless-like 4-like [Ailuropoda
melanoleuca]
Length = 353
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 155 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 201
>gi|401712698|gb|AFP99082.1| Alx1, partial [Ophiocoma wendtii]
Length = 79
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
K+KRR+RT FT QLE++E F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 25 KKKRRNRTTFTSFQLEEMEKIFQKTHYPDVYCREQLALRCDLTEARVQ 72
>gi|395854249|ref|XP_003799610.1| PREDICTED: cone-rod homeobox protein [Otolemur garnettii]
Length = 299
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 36 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 84
>gi|354503342|ref|XP_003513740.1| PREDICTED: homeobox protein aristaless-like 3-like [Cricetulus
griseus]
Length = 479
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT F+ QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 287 SKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 334
>gi|344257015|gb|EGW13119.1| Homeobox protein aristaless-like 4 [Cricetulus griseus]
Length = 237
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 39 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 85
>gi|355002467|gb|AER51858.1| cone-rod homeobox, partial [Rousettus leschenaultii]
Length = 285
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 28 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 76
>gi|355002403|gb|AER51826.1| cone-rod homeobox, partial [Rhinolophus pusillus]
Length = 278
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 28 PRKQRRERTTFTRSQLEELEALFTKTQYPDVYAREEVALKINLPESRVQ 76
>gi|355002367|gb|AER51808.1| cone-rod homeobox, partial [Rhinolophus sinicus]
gi|355002369|gb|AER51809.1| cone-rod homeobox, partial [Rhinolophus sinicus]
gi|355002379|gb|AER51814.1| cone-rod homeobox, partial [Rhinolophus sinicus]
gi|355002381|gb|AER51815.1| cone-rod homeobox, partial [Rhinolophus sinicus]
gi|355002383|gb|AER51816.1| cone-rod homeobox, partial [Rhinolophus sinicus]
gi|355002385|gb|AER51817.1| cone-rod homeobox, partial [Rhinolophus sinicus]
Length = 278
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 28 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 76
>gi|355002453|gb|AER51851.1| cone-rod homeobox, partial [Artibeus lituratus]
Length = 267
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 28 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 76
>gi|27806903|ref|NP_776329.1| cone-rod homeobox protein [Bos taurus]
gi|13626175|sp|Q9XSK0.1|CRX_BOVIN RecName: Full=Cone-rod homeobox protein
gi|4960212|gb|AAD34645.1|AF154123_1 cone-rod homeobox [Bos taurus]
gi|296477398|tpg|DAA19513.1| TPA: cone-rod homeobox protein [Bos taurus]
Length = 299
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 36 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 84
>gi|355002397|gb|AER51823.1| cone-rod homeobox, partial [Rhinolophus pearsonii]
Length = 278
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 28 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 76
>gi|355002427|gb|AER51838.1| cone-rod homeobox, partial [Myotis ricketti]
Length = 285
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 28 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 76
>gi|50978700|ref|NP_001003049.1| cone-rod homeobox protein [Canis lupus familiaris]
gi|42558891|sp|Q8SQ03.1|CRX_CANFA RecName: Full=Cone-rod homeobox protein
gi|19568248|gb|AAL91721.1|AF454668_1 photoreceptor-specific cone-rod homeobox protein [Canis lupus
familiaris]
gi|23197568|emb|CAD45642.1| cone-rod homeobox protein [Canis lupus familiaris]
Length = 299
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 36 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 84
>gi|432093386|gb|ELK25472.1| Cone-rod homeobox protein [Myotis davidii]
Length = 299
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 36 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 84
>gi|355002471|gb|AER51860.1| cone-rod homeobox, partial [Hipposideros pomona]
Length = 268
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 28 PRKQRRERTTFTRGQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 76
>gi|355002371|gb|AER51810.1| cone-rod homeobox, partial [Rhinolophus sinicus]
Length = 278
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 28 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 76
>gi|355002461|gb|AER51855.1| cone-rod homeobox, partial [Cynopterus sphinx]
Length = 285
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 28 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 76
>gi|355002445|gb|AER51847.1| cone-rod homeobox, partial [Sturnira lilium]
Length = 285
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 28 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 76
>gi|355002463|gb|AER51856.1| cone-rod homeobox, partial [Cynopterus sphinx]
Length = 285
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 28 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 76
>gi|340718758|ref|XP_003397830.1| PREDICTED: hypothetical protein LOC100650965 [Bombus terrestris]
gi|350405057|ref|XP_003487311.1| PREDICTED: hypothetical protein LOC100748956 [Bombus impatiens]
Length = 437
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 37/45 (82%)
Query: 46 RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
RRHRTIFT +QLE+LEA F++ HYPDV RE L+L+ DL E+R++
Sbjct: 197 RRHRTIFTSQQLEELEAAFKEAHYPDVYAREMLSLRTDLPEDRIQ 241
>gi|431920822|gb|ELK18595.1| Cone-rod homeobox protein [Pteropus alecto]
Length = 371
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 108 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 156
>gi|355002449|gb|AER51849.1| cone-rod homeobox, partial [Lonchophylla thomasi]
Length = 285
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 28 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 76
>gi|355002451|gb|AER51850.1| cone-rod homeobox, partial [Pteronotus parnellii]
Length = 262
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 5 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 53
>gi|355002417|gb|AER51833.1| cone-rod homeobox, partial [Hipposideros pomona]
Length = 285
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 28 PRKQRRERTTFTRGQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 76
>gi|444513121|gb|ELV10274.1| ALX homeobox protein 1 [Tupaia chinensis]
Length = 181
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLAL+ +L E RV+
Sbjct: 131 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 177
>gi|328781243|ref|XP_394790.4| PREDICTED: visual system homeobox 1-like [Apis mellifera]
Length = 437
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 37/45 (82%)
Query: 46 RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
RRHRTIFT +QLE+LEA F++ HYPDV RE L+L+ DL E+R++
Sbjct: 197 RRHRTIFTSQQLEELEAAFKEAHYPDVYAREMLSLRTDLPEDRIQ 241
>gi|156378586|ref|XP_001631223.1| predicted protein [Nematostella vectensis]
gi|156218259|gb|EDO39160.1| predicted protein [Nematostella vectensis]
Length = 106
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 39/47 (82%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRTIFT QLE+LE F+++HYPDV RE L+LK+DL E+R++
Sbjct: 4 KKRRHRTIFTNYQLEELEKAFKESHYPDVYARENLSLKIDLPEDRIQ 50
>gi|355757247|gb|EHH60772.1| Aristaless-related homeobox [Macaca fascicularis]
Length = 290
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 40/49 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVEP 91
+++RR+RT FT QLE+LE F+KTHYPDV RE+LA+++DL E RV+P
Sbjct: 148 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQP 196
>gi|124111346|gb|ABM92080.1| ALX4 [Pan troglodytes]
Length = 255
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 57 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 103
>gi|355002447|gb|AER51848.1| cone-rod homeobox, partial [Micronycteris nicefori]
Length = 281
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 28 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 76
>gi|351696938|gb|EHA99856.1| Homeobox protein aristaless-like 4, partial [Heterocephalus glaber]
Length = 300
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 101 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 147
>gi|291398309|ref|XP_002715836.1| PREDICTED: aristaless-like homeobox 3 [Oryctolagus cuniculus]
Length = 343
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT F+ QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 152 KKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 198
>gi|355002431|gb|AER51840.1| cone-rod homeobox, partial [Nyctalus plancyi]
Length = 285
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 28 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 76
>gi|348580359|ref|XP_003475946.1| PREDICTED: ALX homeobox protein 1-like [Cavia porcellus]
Length = 353
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLAL+ +L E RV+
Sbjct: 158 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 204
>gi|440808062|gb|AGC24174.1| Drgx [Lymnaea stagnalis]
Length = 416
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 8/73 (10%)
Query: 18 YPGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQ 77
YPGY HA A A +++RR+RT FT +QLE+LE F +THYPDV +RE
Sbjct: 29 YPGYGLHADLHDEAFAR--------RKQRRNRTTFTLQQLEELEKAFAQTHYPDVFMRED 80
Query: 78 LALKVDLKEERVE 90
LA++++L E RV+
Sbjct: 81 LAMRINLTEARVQ 93
>gi|355002429|gb|AER51839.1| cone-rod homeobox, partial [Nyctalus plancyi]
gi|355002433|gb|AER51841.1| cone-rod homeobox, partial [Nyctalus plancyi]
gi|355002435|gb|AER51842.1| cone-rod homeobox, partial [Nyctalus plancyi]
Length = 285
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 28 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 76
>gi|426243075|ref|XP_004015389.1| PREDICTED: LOW QUALITY PROTEIN: cone-rod homeobox protein [Ovis
aries]
Length = 295
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 36 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 84
>gi|326911636|ref|XP_003202163.1| PREDICTED: ALX homeobox protein 1-like, partial [Meleagris
gallopavo]
Length = 179
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLAL+ +L E RV+
Sbjct: 133 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 179
>gi|297260546|ref|XP_001112633.2| PREDICTED: homeobox protein goosecoid-2-like [Macaca mulatta]
Length = 199
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 6/69 (8%)
Query: 28 TIAAMAASQHSAPPP------KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALK 81
++ A A + P P +R RRHRTIF+EEQL+ LEA F + YPDV RE+LA +
Sbjct: 97 SLGAPAGGSRALPGPVGPGSQRRTRRHRTIFSEEQLQALEALFVQNQYPDVSTRERLAGR 156
Query: 82 VDLKEERVE 90
+ L+EERVE
Sbjct: 157 IRLREERVE 165
>gi|444724758|gb|ELW65356.1| Homeobox protein aristaless-like 3 [Tupaia chinensis]
Length = 260
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 41/60 (68%)
Query: 31 AMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+ S SA +KRR+RT F+ QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 56 GLPDSMESAKNKSKKRRNRTTFSTAQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 115
>gi|327259725|ref|XP_003214686.1| PREDICTED: homeobox protein aristaless-like 4-like [Anolis
carolinensis]
Length = 337
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 141 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 187
>gi|395744635|ref|XP_002823601.2| PREDICTED: ALX homeobox protein 1-like, partial [Pongo abelii]
Length = 220
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLAL+ +L E RV+
Sbjct: 131 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 177
>gi|355002437|gb|AER51843.1| cone-rod homeobox, partial [Chaerephon plicatus]
Length = 266
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 28 PRKQRRERTTFTRNQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 76
>gi|327280906|ref|XP_003225192.1| PREDICTED: homeobox protein goosecoid-2-like [Anolis carolinensis]
Length = 213
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+R RRHRTIFTE+QL+ LEA F + YPDV+ RE LA ++ LKEERVE
Sbjct: 131 RRTRRHRTIFTEDQLQALEALFHQNQYPDVITREHLANRIHLKEERVE 178
>gi|403284219|ref|XP_003933476.1| PREDICTED: homeobox protein aristaless-like 3 [Saimiri boliviensis
boliviensis]
Length = 343
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT F+ QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 152 KKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 198
>gi|363727605|ref|XP_425445.3| PREDICTED: ALX homeobox protein 1 [Gallus gallus]
Length = 328
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLAL+ +L E RV+
Sbjct: 133 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 179
>gi|296208775|ref|XP_002751237.1| PREDICTED: homeobox protein aristaless-like 3 [Callithrix jacchus]
Length = 343
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT F+ QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 152 KKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 198
>gi|126310947|ref|XP_001372601.1| PREDICTED: homeobox protein aristaless-like 3-like [Monodelphis
domestica]
Length = 336
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT F+ QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 144 NKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 191
>gi|432090369|gb|ELK23795.1| Homeobox protein aristaless-like 4 [Myotis davidii]
Length = 187
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 39 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 85
>gi|432856452|ref|XP_004068428.1| PREDICTED: retinal homeobox protein Rx1-like [Oryzias latipes]
Length = 344
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 41/57 (71%)
Query: 34 ASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
AS PP K+ RR+RT FT QL +LE FEK+HYPDV RE+LA+KV+L E RV+
Sbjct: 132 ASSKDDPPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQ 188
>gi|4102043|gb|AAD01418.1| homeobox protein [Homo sapiens]
Length = 343
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT F+ QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 152 KKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 198
>gi|113204604|ref|NP_006483.2| homeobox protein aristaless-like 3 [Homo sapiens]
gi|426330701|ref|XP_004026345.1| PREDICTED: homeobox protein aristaless-like 3 [Gorilla gorilla
gorilla]
gi|215273931|sp|O95076.2|ALX3_HUMAN RecName: Full=Homeobox protein aristaless-like 3; AltName:
Full=Proline-rich transcription factor ALX3
gi|85566666|gb|AAI12008.1| ALX3 protein [Homo sapiens]
gi|109731688|gb|AAI13429.1| ALX homeobox 3 [Homo sapiens]
gi|119576834|gb|EAW56430.1| aristaless-like homeobox 3 [Homo sapiens]
Length = 343
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT F+ QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 152 KKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 198
>gi|431915726|gb|ELK16059.1| Homeobox protein aristaless-like 4 [Pteropus alecto]
Length = 195
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 128 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 174
>gi|297664163|ref|XP_002810521.1| PREDICTED: homeobox protein aristaless-like 3 [Pongo abelii]
Length = 343
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT F+ QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 152 KKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 198
>gi|348587018|ref|XP_003479265.1| PREDICTED: homeobox protein aristaless-like 3-like [Cavia
porcellus]
Length = 343
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT F+ QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 152 KKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 198
>gi|351704314|gb|EHB07233.1| Homeobox protein aristaless-like 3 [Heterocephalus glaber]
Length = 332
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT F+ QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 149 KKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 195
>gi|355002421|gb|AER51835.1| cone-rod homeobox, partial [Hipposideros armiger]
Length = 285
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++AL+++L E RV+
Sbjct: 28 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALRINLPESRVQ 76
>gi|149638014|ref|XP_001513012.1| PREDICTED: ALX homeobox protein 1 [Ornithorhynchus anatinus]
Length = 326
Score = 67.8 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLAL+ +L E RV+
Sbjct: 131 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 177
>gi|432114786|gb|ELK36541.1| Visual system homeobox 1 [Myotis davidii]
Length = 221
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 39/51 (76%)
Query: 40 PPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P ++KRRHRT+FT +QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 21 PGKRKKRRHRTVFTNQQLEELEKAFSEAHYPDVYAREMLAMKTELPEDRIQ 71
>gi|402883514|ref|XP_003905259.1| PREDICTED: homeobox protein goosecoid-2 [Papio anubis]
Length = 199
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 6/69 (8%)
Query: 28 TIAAMAASQHSAPPP------KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALK 81
++ A A + P P +R RRHRTIF+EEQL+ LEA F + YPDV RE+LA +
Sbjct: 97 SLGAPAGGSGALPGPVGPGSQRRTRRHRTIFSEEQLQALEALFVQNQYPDVSTRERLAGR 156
Query: 82 VDLKEERVE 90
+ L+EERVE
Sbjct: 157 IRLREERVE 165
>gi|402855587|ref|XP_003892401.1| PREDICTED: homeobox protein aristaless-like 3 [Papio anubis]
Length = 343
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT F+ QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 152 KKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 198
>gi|332237569|ref|XP_003267978.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein aristaless-like 3
[Nomascus leucogenys]
Length = 343
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT F+ QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 152 KKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 198
>gi|426373600|ref|XP_004053685.1| PREDICTED: ALX homeobox protein 1 [Gorilla gorilla gorilla]
Length = 329
Score = 67.8 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLAL+ +L E RV+
Sbjct: 131 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 177
>gi|126339394|ref|XP_001364457.1| PREDICTED: ALX homeobox protein 1 [Monodelphis domestica]
Length = 326
Score = 67.8 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLAL+ +L E RV+
Sbjct: 131 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 177
>gi|114559041|ref|XP_524801.2| PREDICTED: ALX homeobox 3 [Pan troglodytes]
Length = 343
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT F+ QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 152 KKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 198
>gi|109013372|ref|XP_001099295.1| PREDICTED: ALX homeobox 3 [Macaca mulatta]
Length = 343
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT F+ QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 152 KKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 198
>gi|7106250|ref|NP_031467.1| homeobox protein aristaless-like 3 [Mus musculus]
gi|13626105|sp|O70137.1|ALX3_MOUSE RecName: Full=Homeobox protein aristaless-like 3; AltName:
Full=Proline-rich transcription factor ALX3
gi|3041869|gb|AAC15094.1| proline-rich transcription factor ALX3 [Mus musculus]
gi|74206384|dbj|BAE24916.1| unnamed protein product [Mus musculus]
gi|146327428|gb|AAI41538.1| Aristaless-like homeobox 3 [synthetic construct]
Length = 343
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT F+ QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 152 KKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 198
>gi|291045446|ref|NP_001166914.1| cone-rod homeobox protein [Felis catus]
gi|289583669|gb|ADD10739.1| truncated cone-rod homeobox protein [Felis catus]
Length = 185
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 12 VAYPNLYPGYMTHAAATIAAMAASQHSA----PPPKRKRRHRTIFTEEQLEQLEATFEKT 67
+AY N P Y +A A H A P+++RR RT FT QLE+LEA F KT
Sbjct: 2 MAYMNPGPHYSVNALALSGPSVDLMHQAVSYPSAPRKQRRERTTFTRSQLEELEALFAKT 61
Query: 68 HYPDVVLREQLALKVDLKEERVE 90
YPDV RE++ALK++L E RV+
Sbjct: 62 QYPDVYAREEVALKINLPESRVQ 84
>gi|395535578|ref|XP_003769800.1| PREDICTED: homeobox protein aristaless-like 3 [Sarcophilus
harrisii]
Length = 357
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT F+ QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 165 NKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 212
>gi|149025640|gb|EDL81883.1| rCG29053 [Rattus norvegicus]
Length = 343
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT F+ QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 152 KKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 198
>gi|291386716|ref|XP_002709731.1| PREDICTED: orthodenticle homeobox 1 [Oryctolagus cuniculus]
Length = 397
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QL+ LEA F KT YPD+ +RE++ALK++L E RV+
Sbjct: 35 PRKQRRERTTFTRSQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQ 83
>gi|224094163|ref|XP_002196043.1| PREDICTED: ALX homeobox protein 1 [Taeniopygia guttata]
Length = 328
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLAL+ +L E RV+
Sbjct: 133 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 179
>gi|55742834|ref|NP_001007013.1| homeobox protein aristaless-like 3 [Rattus norvegicus]
gi|40018990|gb|AAR37014.1| aristaless-related ALX3 [Rattus norvegicus]
Length = 343
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT F+ QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 152 KKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 198
>gi|311257828|ref|XP_003127313.1| PREDICTED: cone-rod homeobox protein-like [Sus scrofa]
Length = 299
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LE+ F KT YPDV RE++ALK++L E RV+
Sbjct: 36 PRKQRRERTTFTRSQLEELESLFAKTQYPDVYAREEVALKINLPESRVQ 84
>gi|587456|emb|CAA57161.1| alx3 [Mesocricetus auratus]
Length = 346
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT F+ QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 155 KKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 201
>gi|443734928|gb|ELU18784.1| hypothetical protein CAPTEDRAFT_147353, partial [Capitella
teleta]
Length = 116
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 IATGASMVAVAYPNLYPGYMTHAAATIAAMAAS--QHSAPPPKRKRRHRTIFTEEQLEQL 60
I G S V +A+ + + A A Q A +++RR+RT FT +QLE+L
Sbjct: 6 IFCGLSSVYIAFNKFLLIFDCFSCADTAYSLHQELQDDAFARRKQRRNRTTFTLQQLEEL 65
Query: 61 EATFEKTHYPDVVLREQLALKVDLKEERVE 90
E F +THYPDV RE+LA++++L E RV+
Sbjct: 66 EKAFAQTHYPDVFTREELAMRINLTEARVQ 95
>gi|395821545|ref|XP_003784098.1| PREDICTED: homeobox protein aristaless-like 3 [Otolemur garnettii]
Length = 343
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT F+ QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 152 KKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 198
>gi|332226885|ref|XP_003262622.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein OTX1 [Nomascus
leucogenys]
Length = 481
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QL+ LEA F KT YPD+ +RE++ALK++L E RV+
Sbjct: 35 PRKQRRERTTFTRSQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQ 83
>gi|312098632|ref|XP_003149115.1| hypothetical protein LOAG_13561 [Loa loa]
Length = 131
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%)
Query: 26 AATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLK 85
A+++ A A S S P +RRHRT FT+EQL +L+A F+K+HYPD+ +RE+LA L
Sbjct: 67 ASSVFASALSGSSQVPASVRRRHRTTFTQEQLAELDAAFQKSHYPDIYVREELARITKLN 126
Query: 86 EERVE 90
E R++
Sbjct: 127 EARIQ 131
>gi|47220562|emb|CAG05588.1| unnamed protein product [Tetraodon nigroviridis]
Length = 319
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 42/72 (58%)
Query: 19 PGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQL 78
PG + MA S +KRRHRT FT E+LE F+KTHYPDV +REQL
Sbjct: 105 PGPTGQEKTDLDDMADKCDSNVSSSKKRRHRTTFTSAHWEELEKVFQKTHYPDVYVREQL 164
Query: 79 ALKVDLKEERVE 90
A++ +L E RV+
Sbjct: 165 AMRTELTEARVQ 176
>gi|171543907|ref|NP_001116404.1| diencephalon/mesencephalon homeobox 1 isoform Mbx-L [Oryzias
latipes]
gi|157410512|gb|ABV53979.1| diencephalon/mesencephalon homeobox 1 isoform Mbx-L [Oryzias
latipes]
Length = 434
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
Query: 17 LYPGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLRE 76
L+ T + A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE
Sbjct: 84 LFLNGCTFQDIILEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRE 138
Query: 77 QLALKVDLKEERVE 90
+LA+ +L E RV+
Sbjct: 139 RLAMCTNLPEARVQ 152
>gi|449272667|gb|EMC82474.1| ALX homeobox protein 1 [Columba livia]
Length = 326
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRRHRT FT QLE+LE F+KTHYPDV +REQLAL+ +L E RV+
Sbjct: 131 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQ 177
>gi|312384622|gb|EFR29308.1| hypothetical protein AND_01859 [Anopheles darlingi]
Length = 175
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 11/80 (13%)
Query: 19 PGYMTHAAATIAAMAASQH--------SAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYP 70
PG ++ + I+A+ QH S P P R RRHRT FT+EQL +LEA F K+HYP
Sbjct: 37 PGGISSPGSGISALP--QHAGHTPTTASCPTPAR-RRHRTTFTQEQLAELEAAFAKSHYP 93
Query: 71 DVVLREQLALKVDLKEERVE 90
D+ RE+LA L E R++
Sbjct: 94 DIYCREELARTTKLNEARIQ 113
>gi|355002459|gb|AER51854.1| cone-rod homeobox, partial [Sphaerias blanfordi]
Length = 260
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ALK++L E RV+
Sbjct: 3 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQ 51
>gi|426218849|ref|XP_004003649.1| PREDICTED: homeobox protein aristaless-like 3 [Ovis aries]
Length = 330
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT F+ QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 139 KKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 185
>gi|426218705|ref|XP_004003579.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 [Ovis
aries]
Length = 501
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 34 ASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E RV+
Sbjct: 240 GSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQ 291
>gi|148669964|gb|EDL01911.1| aristaless 3 [Mus musculus]
Length = 258
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT F+ QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 67 KKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 113
>gi|390465901|ref|XP_003733484.1| PREDICTED: LOW QUALITY PROTEIN: diencephalon/mesencephalon homeobox
protein 1 [Callithrix jacchus]
Length = 508
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 185 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 239
Query: 89 VE 90
V+
Sbjct: 240 VQ 241
>gi|397478868|ref|XP_003810757.1| PREDICTED: homeobox protein aristaless-like 3, partial [Pan
paniscus]
Length = 295
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT F+ QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 104 KKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 150
>gi|426393492|ref|XP_004063054.1| PREDICTED: homeobox protein goosecoid-2, partial [Gorilla gorilla
gorilla]
Length = 190
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+R RRHRTIF+EEQL+ LEA F + YPDV RE+LA ++ L+EERVE
Sbjct: 109 RRTRRHRTIFSEEQLQALEALFVQNQYPDVSTRERLAGRIRLREERVE 156
>gi|301615770|ref|XP_002937332.1| PREDICTED: homeobox protein aristaless-like 4-like [Xenopus
(Silurana) tropicalis]
Length = 360
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 185 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 231
>gi|397485994|ref|XP_003814120.1| PREDICTED: homeobox protein goosecoid-2 [Pan paniscus]
Length = 190
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+R RRHRTIF+EEQL+ LEA F + YPDV RE+LA ++ L+EERVE
Sbjct: 109 RRTRRHRTIFSEEQLQALEALFVQNQYPDVSTRERLAGRIRLREERVE 156
>gi|326929823|ref|XP_003211055.1| PREDICTED: homeobox protein goosecoid-2-like [Meleagris
gallopavo]
Length = 110
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+R RRHRTIFTEEQL+ LE F + YPDV+ RE LA ++ LKEERVE
Sbjct: 29 RRTRRHRTIFTEEQLQALETLFHQNQYPDVITREHLANRIHLKEERVE 76
>gi|33326132|gb|AAQ08476.1| OTX5 protein [Crocodylus niloticus]
Length = 271
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QL+ LEA F KT YPD+ +RE++ALK++L E RV+
Sbjct: 22 PRKQRRERTTFTRAQLDILEALFAKTRYPDIFMREEVALKINLPESRVQ 70
>gi|440909664|gb|ELR59549.1| Homeobox protein aristaless-like 3, partial [Bos grunniens mutus]
Length = 273
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT F+ QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 89 KKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 135
>gi|4885363|ref|NP_005306.1| homeobox protein goosecoid-2 [Homo sapiens]
gi|6685480|sp|O15499.1|GSC2_HUMAN RecName: Full=Homeobox protein goosecoid-2; Short=GSC-2; AltName:
Full=Homeobox protein goosecoid-like; Short=GSC-L
gi|2352056|gb|AAC39544.1| GSC-2 [Homo sapiens]
gi|119623457|gb|EAX03052.1| goosecoid-like [Homo sapiens]
Length = 205
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+R RRHRTIF+EEQL+ LEA F + YPDV RE+LA ++ L+EERVE
Sbjct: 124 RRTRRHRTIFSEEQLQALEALFVQNQYPDVSTRERLAGRIRLREERVE 171
>gi|397497709|ref|XP_003819648.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein ARX [Pan paniscus]
Length = 633
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV RE+LA+++DL E RV+
Sbjct: 394 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 441
>gi|355558252|gb|EHH15032.1| hypothetical protein EGK_01064, partial [Macaca mulatta]
Length = 254
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT F+ QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 63 KKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 109
>gi|405965818|gb|EKC31172.1| Homeobox protein aristaless [Crassostrea gigas]
Length = 332
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV +RE+LA+++DL E RV+
Sbjct: 115 RKQRRYRTTFTSFQLEELERAFQKTHYPDVFMREELAMRIDLTEARVQ 162
>gi|395858871|ref|XP_003801780.1| PREDICTED: homeobox protein goosecoid-2 [Otolemur garnettii]
Length = 150
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 39/50 (78%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P +R RRHRTIF+EEQL+ LEA F + YPDV RE+LA ++ L+EERVE
Sbjct: 67 PQRRTRRHRTIFSEEQLQALEALFVQNQYPDVGTRERLAGRIRLREERVE 116
>gi|393908042|gb|EJD74882.1| hypothetical protein LOAG_17870 [Loa loa]
Length = 222
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%)
Query: 26 AATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLK 85
A+++ A A S S P +RRHRT FT+EQL +L+A F+K+HYPD+ +RE+LA L
Sbjct: 67 ASSVFASALSGSSQVPASVRRRHRTTFTQEQLAELDAAFQKSHYPDIYVREELARITKLN 126
Query: 86 EERVE 90
E R++
Sbjct: 127 EARIQ 131
>gi|354470034|ref|XP_003497402.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 1
[Cricetulus griseus]
gi|344238464|gb|EGV94567.1| Diencephalon/mesencephalon homeobox protein 1 [Cricetulus griseus]
Length = 378
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 55 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 109
Query: 89 VE 90
V+
Sbjct: 110 VQ 111
>gi|354470038|ref|XP_003497403.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 2
[Cricetulus griseus]
Length = 383
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 60 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 114
Query: 89 VE 90
V+
Sbjct: 115 VQ 116
>gi|449281985|gb|EMC88916.1| Homeobox protein goosecoid-2 [Columba livia]
Length = 218
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+R RRHRTIFTE+QL+ LE F + YPDV+ RE LA ++ LKEERVE
Sbjct: 137 RRTRRHRTIFTEDQLQALETLFHQNQYPDVITREHLANRIHLKEERVE 184
>gi|25990914|gb|AAN76724.1| Mbx [Mus musculus]
Length = 381
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 60 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 114
Query: 89 VE 90
V+
Sbjct: 115 VQ 116
>gi|355002377|gb|AER51813.1| cone-rod homeobox, partial [Myotis laniger]
Length = 285
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 37/49 (75%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F KT YPDV RE++ LK++L E RV+
Sbjct: 28 PRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVVLKINLPESRVQ 76
>gi|431896854|gb|ELK06118.1| Diencephalon/mesencephalon homeobox protein 1 [Pteropus alecto]
Length = 407
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 90 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 144
Query: 89 VE 90
V+
Sbjct: 145 VQ 146
>gi|440892695|gb|ELR45776.1| Homeobox protein OTX1 [Bos grunniens mutus]
Length = 351
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QL+ LEA F KT YPD+ +RE++ALK++L E RV+
Sbjct: 35 PRKQRRERTTFTRSQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQ 83
>gi|431914288|gb|ELK15546.1| Homeobox protein goosecoid-2 [Pteropus alecto]
Length = 307
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 39/50 (78%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P +R RRHRTIF+EEQL+ LEA F + YPDV RE+LA ++ L+EERVE
Sbjct: 224 PQRRTRRHRTIFSEEQLQALEALFVQNQYPDVGTRERLAGRIRLREERVE 273
>gi|344307339|ref|XP_003422339.1| PREDICTED: homeobox protein goosecoid-2-like [Loxodonta africana]
Length = 183
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 39/50 (78%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P +R RRHRTIF+EEQL+ LEA F + YPDV RE+LA ++ L+EERVE
Sbjct: 100 PQRRTRRHRTIFSEEQLQALEALFLQNQYPDVGTRERLAGRIRLREERVE 149
>gi|110762829|ref|XP_001121339.1| PREDICTED: hypothetical protein LOC725502 [Apis mellifera]
Length = 250
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 6 GASMVAVAYPNLYPGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFE 65
GA +V +P + ++ ++ Q + +++RR+RT FT QLE+LE F+
Sbjct: 59 GAQSSSVCFPTKF----SYDFSSSPGSEDRQSTGVGKRKQRRYRTTFTNFQLEELERAFQ 114
Query: 66 KTHYPDVVLREQLALKVDLKEERVE 90
KTHYPDV RE+LAL++ L E RV+
Sbjct: 115 KTHYPDVFFREELALRIQLTEARVQ 139
>gi|3650208|dbj|BAA33410.1| LjOtxB [Lethenteron camtschaticum]
Length = 316
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 39/51 (76%)
Query: 40 PPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P P+++RR RT FT QL+ LE+ F KT YPD+ +RE++ALK++L E RV+
Sbjct: 31 PAPRKQRRERTTFTRAQLDILESLFSKTRYPDIFMREEVALKINLPESRVQ 81
>gi|355761215|gb|EHH61775.1| hypothetical protein EGM_19864, partial [Macaca fascicularis]
Length = 258
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT F+ QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 63 KKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 109
>gi|21623544|dbj|BAC00919.1| PaxB [Mus musculus]
Length = 387
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 34 ASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E RV+
Sbjct: 71 GSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQ 122
>gi|395518788|ref|XP_003763539.1| PREDICTED: homeobox protein ARX [Sarcophilus harrisii]
Length = 339
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV RE+LA+++DL E RV+
Sbjct: 103 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 150
>gi|348581289|ref|XP_003476410.1| PREDICTED: visual system homeobox 1-like [Cavia porcellus]
Length = 425
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT +QLE+LE F + HYPDV RE LALK L E+R++
Sbjct: 235 RKKRRHRTVFTAQQLEELEKAFREAHYPDVYAREMLALKTQLPEDRIQ 282
>gi|33326134|gb|AAQ08477.1| OTX5 protein [Gallus gallus]
Length = 268
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QL+ LEA F KT YPD+ +RE++ALK++L E RV+
Sbjct: 22 PRKQRRERTTFTRAQLDILEALFAKTRYPDIFMREEVALKINLPESRVQ 70
>gi|390361068|ref|XP_003729834.1| PREDICTED: dorsal root ganglia homeobox protein-like
[Strongylocentrotus purpuratus]
Length = 347
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE+LE+ F KTHYPDV RE LAL+++L E RV+
Sbjct: 52 RKQRRNRTTFTVQQLEELESAFAKTHYPDVFTREDLALRINLTEARVQ 99
>gi|355002465|gb|AER51857.1| cone-rod homeobox, partial [Rousettus leschenaultii]
Length = 285
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA F +T YPDV RE++ALK++L E RV+
Sbjct: 28 PRKQRRERTTFTRSQLEELEALFAETQYPDVYAREEVALKINLPESRVQ 76
>gi|395518471|ref|XP_003763384.1| PREDICTED: homeobox protein goosecoid-2 [Sarcophilus harrisii]
Length = 135
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 39/51 (76%)
Query: 40 PPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P +R RRHRTIF+EEQL+ LEA F + YPDVV RE LA ++ LKEERVE
Sbjct: 51 PLQRRTRRHRTIFSEEQLQALEALFLQNQYPDVVAREHLANRIHLKEERVE 101
>gi|74095943|ref|NP_001027814.1| paired homeobox protein [Takifugu rubripes]
gi|27475514|gb|AAL58533.1| paired homeobox protein [Takifugu rubripes]
Length = 380
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 55 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 109
Query: 89 VE 90
V+
Sbjct: 110 VQ 111
>gi|70909343|ref|NP_570935.3| diencephalon/mesencephalon homeobox protein 1 isoform a [Mus
musculus]
gi|81916299|sp|Q91ZK4.1|DMBX1_MOUSE RecName: Full=Diencephalon/mesencephalon homeobox protein 1;
AltName: Full=Diencephalon/mesencephalon-expressed brain
homeobox gene 1 protein; AltName: Full=Orthodenticle
homolog 3; AltName: Full=Paired-like homeobox protein
DMBX1; AltName: Full=Paired-type homeobox Atx
gi|16903551|gb|AAL30508.1|AF421857_1 paired-like homeobox protein DMBX1 [Mus musculus]
gi|18390053|gb|AAL68836.1|AF463513_1 cerebellar-diencephalic-mesencephalic homeobox protein [Mus
musculus]
Length = 381
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 60 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 114
Query: 89 VE 90
V+
Sbjct: 115 VQ 116
>gi|62955219|ref|NP_001017625.1| diencephalon/mesencephalon homeobox protein 1-B [Danio rerio]
gi|82229939|sp|Q566X8.1|DMX1B_DANRE RecName: Full=Diencephalon/mesencephalon homeobox protein 1-B
gi|62202765|gb|AAH93284.1| Diencephalon/mesencephalon homeobox 1b [Danio rerio]
gi|83779129|gb|ABC47375.1| paired-type homeobox transcription factor Mbx2 [Danio rerio]
gi|182890472|gb|AAI64462.1| Dmbx1b protein [Danio rerio]
Length = 369
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 55 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 109
Query: 89 VE 90
V+
Sbjct: 110 VQ 111
>gi|27807477|ref|NP_777192.1| visual system homeobox 1 [Bos taurus]
gi|25009569|sp|Q9GMA3.1|VSX1_BOVIN RecName: Full=Visual system homeobox 1; AltName: Full=Homeodomain
protein RINX; AltName: Full=Retinal inner nuclear layer
homeobox protein; AltName: Full=Transcription factor
VSX1
gi|9802261|gb|AAF99655.1|AF251032_1 homeodomain protein RINX [Bos taurus]
gi|296481350|tpg|DAA23465.1| TPA: visual system homeobox 1 [Bos taurus]
Length = 365
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%)
Query: 39 APPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
AP ++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 158 APSKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAMKTELPEDRIQ 209
>gi|159164233|pdb|2DMU|A Chain A, Solution Structure Of The Homeobox Domain Of Homeobox
Protein Goosecoid
Length = 70
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 37/45 (82%)
Query: 46 RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
RRHRTIFT+EQLE LE F++T YPDV REQLA KV L+EE+VE
Sbjct: 8 RRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVE 52
>gi|156378114|ref|XP_001630989.1| predicted protein [Nematostella vectensis]
gi|156218021|gb|EDO38926.1| predicted protein [Nematostella vectensis]
Length = 180
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 41/59 (69%)
Query: 32 MAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
M + + P ++KRR+RT FT QLE++E F+KTHYPDV REQLAL+ L E RV+
Sbjct: 1 MDSDSGDSAPKRKKRRNRTTFTAYQLEEMERVFQKTHYPDVYTREQLALRCALTEARVQ 59
>gi|11877290|emb|CAC19028.1| homeobox transcription factor [Platynereis dumerilii]
Length = 205
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%)
Query: 28 TIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEE 87
T A + Q+ A P+++RR RT FT QL+ LE+ F+KT YPD+ +RE++ALK++L E
Sbjct: 52 TRADLEVIQYEAANPRKQRRERTTFTRAQLDVLESLFQKTRYPDIFMREEVALKINLPES 111
Query: 88 RVE 90
RV+
Sbjct: 112 RVQ 114
>gi|301782575|ref|XP_002926705.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein ARX-like
[Ailuropoda melanoleuca]
Length = 459
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV RE+LA+++DL E RV+
Sbjct: 283 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 330
>gi|301603587|ref|XP_002931450.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
isoform 2 [Xenopus (Silurana) tropicalis]
Length = 367
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 60 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 114
Query: 89 VE 90
V+
Sbjct: 115 VQ 116
>gi|20975766|gb|AAM33145.1|AF440099_1 orthopedia [Patella vulgata]
Length = 254
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P +++RHRT FT QL +LE +F KTHYPD+ +RE++AL++ L E RV+
Sbjct: 30 PSKQKRHRTRFTPAQLNELERSFAKTHYPDIFMREEMALRIGLTESRVQ 78
>gi|449490110|ref|XP_002193636.2| PREDICTED: uncharacterized protein LOC100219224 [Taeniopygia
guttata]
Length = 261
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT F+ QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 177 KKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 223
>gi|308513120|gb|ADO33113.1| Goosecoid [Petromyzon marinus]
Length = 155
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 35/48 (72%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
KRKRRHRTIFT+EQL LE FE+ YPDV +RE V L+EERVE
Sbjct: 84 KRKRRHRTIFTDEQLGALEELFEQNQYPDVSMRESWRAXVHLREERVE 131
>gi|47213896|emb|CAF95838.1| unnamed protein product [Tetraodon nigroviridis]
Length = 390
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 57 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 111
Query: 89 VE 90
V+
Sbjct: 112 VQ 113
>gi|224042664|ref|XP_002195184.1| PREDICTED: homeobox protein ARX [Taeniopygia guttata]
Length = 509
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV RE+LA+++DL E RV+
Sbjct: 273 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 320
>gi|154146243|ref|NP_001093644.1| homeobox protein ARX [Rattus norvegicus]
gi|160016491|sp|A6YP92.1|ARX_RAT RecName: Full=Homeobox protein ARX; AltName:
Full=Aristaless-related homeobox
gi|149688998|gb|ABR27821.1| aristaless-related homeobox protein [Rattus norvegicus]
Length = 566
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV RE+LA+++DL E RV+
Sbjct: 330 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 377
>gi|301603585|ref|XP_002931449.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
isoform 1 [Xenopus (Silurana) tropicalis]
Length = 362
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 55 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 109
Query: 89 VE 90
V+
Sbjct: 110 VQ 111
>gi|70909349|ref|NP_001020738.1| diencephalon/mesencephalon homeobox protein 1 isoform b [Mus
musculus]
gi|16903553|gb|AAL30509.1|AF421858_1 paired-like homeobox protein DMBX1 [Mus musculus]
gi|21902328|gb|AAM78514.1|AF499446_1 PRD class homeobox protein [Mus musculus]
gi|30047398|gb|AAH50912.1| Diencephalon/mesencephalon homeobox 1 [Mus musculus]
gi|148698681|gb|EDL30628.1| diencephalon/mesencephalon homeobox 1, isoform CRA_a [Mus musculus]
gi|148698682|gb|EDL30629.1| diencephalon/mesencephalon homeobox 1, isoform CRA_a [Mus musculus]
Length = 376
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 55 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 109
Query: 89 VE 90
V+
Sbjct: 110 VQ 111
>gi|403263874|ref|XP_003924228.1| PREDICTED: homeobox protein ARX [Saimiri boliviensis boliviensis]
Length = 464
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV RE+LA+++DL E RV+
Sbjct: 228 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 275
>gi|157818253|ref|NP_001101431.1| diencephalon/mesencephalon homeobox 1 [Rattus norvegicus]
gi|149035616|gb|EDL90297.1| diencephalon/mesencephalon homeobox 1 (predicted), isoform CRA_a
[Rattus norvegicus]
gi|149035617|gb|EDL90298.1| diencephalon/mesencephalon homeobox 1 (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 376
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 55 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 109
Query: 89 VE 90
V+
Sbjct: 110 VQ 111
>gi|426241769|ref|XP_004014761.1| PREDICTED: visual system homeobox 1 [Ovis aries]
Length = 310
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%)
Query: 39 APPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
AP ++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 103 APSKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQ 154
>gi|348504630|ref|XP_003439864.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
isoform 2 [Oreochromis niloticus]
Length = 400
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 60 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 114
Query: 89 VE 90
V+
Sbjct: 115 VQ 116
>gi|115394172|gb|ABI97033.1| orthodenticle-related homeobox 5 [Gallus gallus]
Length = 287
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QL+ LEA F KT YPD+ +RE++ALK++L E RV+
Sbjct: 35 PRKQRRERTTFTRAQLDILEALFAKTRYPDIFMREEVALKINLPESRVQ 83
>gi|426395443|ref|XP_004063982.1| PREDICTED: homeobox protein ARX [Gorilla gorilla gorilla]
Length = 525
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV RE+LA+++DL E RV+
Sbjct: 289 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 336
>gi|47215984|emb|CAF96386.1| unnamed protein product [Tetraodon nigroviridis]
Length = 353
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 56 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 110
Query: 89 VE 90
V+
Sbjct: 111 VQ 112
>gi|432913637|ref|XP_004078989.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-A-like
[Oryzias latipes]
Length = 389
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 55 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 109
Query: 89 VE 90
V+
Sbjct: 110 VQ 111
>gi|291231892|ref|XP_002735897.1| PREDICTED: aristaless homeodomain transcription factor-like
[Saccoglossus kowalevskii]
Length = 236
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 40/56 (71%)
Query: 35 SQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
S S ++KRR+RT FT QL+++E F++THYPDV REQLAL+ DL E RV+
Sbjct: 95 SDTSDSSKRKKRRNRTTFTSFQLDEMEKVFQRTHYPDVYSREQLALRCDLTEARVQ 150
>gi|348553433|ref|XP_003462531.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 2
[Cavia porcellus]
Length = 377
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 60 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 114
Query: 89 VE 90
V+
Sbjct: 115 VQ 116
>gi|344275621|ref|XP_003409610.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein aristaless-like
3-like [Loxodonta africana]
Length = 343
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT F+ QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 152 KKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLAVRTDLTEARVQ 198
>gi|311259384|ref|XP_003128068.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-like
isoform 1 [Sus scrofa]
Length = 384
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 60 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 114
Query: 89 VE 90
V+
Sbjct: 115 VQ 116
>gi|351711411|gb|EHB14330.1| Diencephalon/mesencephalon homeobox protein 1 [Heterocephalus
glaber]
Length = 379
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 61 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 115
Query: 89 VE 90
V+
Sbjct: 116 VQ 117
>gi|109130220|ref|XP_001091313.1| PREDICTED: homeobox protein ARX [Macaca mulatta]
Length = 562
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV RE+LA+++DL E RV+
Sbjct: 326 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 373
>gi|218675700|gb|AAI69334.2| aristaless related homeobox [synthetic construct]
Length = 248
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV RE+LA+++DL E RV+
Sbjct: 12 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 59
>gi|449477329|ref|XP_002195901.2| PREDICTED: homeobox protein goosecoid-2, partial [Taeniopygia
guttata]
Length = 83
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+R RRHRTIFTEEQL+ LE F + YPDVV RE LA ++ LKEERVE
Sbjct: 3 RRTRRHRTIFTEEQLQALETLFHQNQYPDVVTREHLANRIHLKEERVE 50
>gi|332219857|ref|XP_003259074.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 2
[Nomascus leucogenys]
Length = 382
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 60 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 114
Query: 89 VE 90
V+
Sbjct: 115 VQ 116
>gi|426329500|ref|XP_004025778.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 2
[Gorilla gorilla gorilla]
Length = 384
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 60 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 114
Query: 89 VE 90
V+
Sbjct: 115 VQ 116
>gi|24497589|ref|NP_620689.1| homeobox protein ARX [Homo sapiens]
gi|27923733|sp|Q96QS3.1|ARX_HUMAN RecName: Full=Homeobox protein ARX; AltName:
Full=Aristaless-related homeobox
gi|15315600|gb|AAK93901.1| aristaless-related homeobox protein ARX [Homo sapiens]
gi|119619437|gb|EAW99031.1| aristaless related homeobox, isoform CRA_a [Homo sapiens]
Length = 562
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV RE+LA+++DL E RV+
Sbjct: 326 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 373
>gi|410924614|ref|XP_003975776.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-A-like
[Takifugu rubripes]
Length = 387
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 55 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 109
Query: 89 VE 90
V+
Sbjct: 110 VQ 111
>gi|348504628|ref|XP_003439863.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
isoform 1 [Oreochromis niloticus]
Length = 395
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 55 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 109
Query: 89 VE 90
V+
Sbjct: 110 VQ 111
>gi|332808877|ref|XP_003308127.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 1
[Pan troglodytes]
gi|397483205|ref|XP_003812794.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 2
[Pan paniscus]
Length = 382
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 60 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 114
Query: 89 VE 90
V+
Sbjct: 115 VQ 116
>gi|444519265|gb|ELV12700.1| Diencephalon/mesencephalon homeobox protein 1 [Tupaia chinensis]
Length = 248
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 18 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 72
Query: 89 VE 90
V+
Sbjct: 73 VQ 74
>gi|344278734|ref|XP_003411147.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-like
isoform 1 [Loxodonta africana]
Length = 382
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 60 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 114
Query: 89 VE 90
V+
Sbjct: 115 VQ 116
>gi|335291547|ref|XP_003356526.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-like [Sus
scrofa]
Length = 379
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 55 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 109
Query: 89 VE 90
V+
Sbjct: 110 VQ 111
>gi|410900744|ref|XP_003963856.1| PREDICTED: homeobox protein OTX1 B-like [Takifugu rubripes]
Length = 332
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QL+ LEA F KT YPD+ +RE++ALK++L E RV+
Sbjct: 35 PRKQRRERTTFTRSQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQ 83
>gi|149574597|ref|XP_001510717.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-like
[Ornithorhynchus anatinus]
Length = 362
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 54 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 108
Query: 89 VE 90
V+
Sbjct: 109 VQ 110
>gi|22218349|ref|NP_671725.1| diencephalon/mesencephalon homeobox protein 1 isoform b [Homo
sapiens]
gi|74762571|sp|Q8NFW5.1|DMBX1_HUMAN RecName: Full=Diencephalon/mesencephalon homeobox protein 1;
AltName: Full=Orthodenticle homolog 3; AltName:
Full=Paired-like homeobox protein DMBX1
gi|22085911|gb|AAM90590.1|AF398528_1 homeoprotein MBX-L [Homo sapiens]
gi|162318062|gb|AAI56882.1| Diencephalon/mesencephalon homeobox 1 [synthetic construct]
gi|162319248|gb|AAI56065.1| Diencephalon/mesencephalon homeobox 1 [synthetic construct]
Length = 382
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 60 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 114
Query: 89 VE 90
V+
Sbjct: 115 VQ 116
>gi|47224717|emb|CAG00311.1| unnamed protein product [Tetraodon nigroviridis]
Length = 333
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QL+ LEA F KT YPD+ +RE++ALK++L E RV+
Sbjct: 35 PRKQRRERTTFTRSQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQ 83
>gi|351706647|gb|EHB09566.1| Visual system homeobox 1 [Heterocephalus glaber]
Length = 299
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT +QLE+LE F + HYPDV RE LALK L E+R++
Sbjct: 105 RKKRRHRTVFTAQQLEELEKAFGEAHYPDVYAREMLALKTQLPEDRIQ 152
>gi|348553431|ref|XP_003462530.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 1
[Cavia porcellus]
Length = 372
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 55 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 109
Query: 89 VE 90
V+
Sbjct: 110 VQ 111
>gi|307201384|gb|EFN81212.1| Visual system homeobox 1 [Harpegnathos saltator]
Length = 164
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 37/45 (82%)
Query: 46 RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
RRHRTIFT +QLE+LEA F++ HYPDV RE L+L+ DL E+R++
Sbjct: 64 RRHRTIFTSQQLEELEAAFKEAHYPDVYAREMLSLRTDLPEDRIQ 108
>gi|33326136|gb|AAQ08478.1| OTX5 protein [Emys orbicularis]
Length = 271
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QL+ LEA F KT YPD+ +RE++ALK++L E RV+
Sbjct: 22 PRKQRRERTTFTRAQLDILEALFAKTRYPDIFMREEVALKINLPESRVQ 70
>gi|344254792|gb|EGW10896.1| Homeobox protein aristaless-like 3 [Cricetulus griseus]
Length = 200
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT F+ QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 9 KKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 55
>gi|301768198|ref|XP_002919511.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-like
isoform 2 [Ailuropoda melanoleuca]
Length = 382
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 60 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 114
Query: 89 VE 90
V+
Sbjct: 115 VQ 116
>gi|148238213|ref|NP_001079329.1| aristaless related homeobox [Xenopus laevis]
gi|23499459|gb|AAN05413.1| aristaless-related homeobox [Xenopus laevis]
gi|213623330|gb|AAI69601.1| Aristaless related homeobox [Xenopus laevis]
Length = 527
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV RE+LA+++DL E RV+
Sbjct: 290 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 337
>gi|21623546|dbj|BAC00920.1| PaxB [Homo sapiens]
Length = 382
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 60 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 114
Query: 89 VE 90
V+
Sbjct: 115 VQ 116
>gi|344278736|ref|XP_003411148.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-like
isoform 2 [Loxodonta africana]
Length = 377
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 55 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 109
Query: 89 VE 90
V+
Sbjct: 110 VQ 111
>gi|426329498|ref|XP_004025777.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 1
[Gorilla gorilla gorilla]
Length = 379
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 55 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 109
Query: 89 VE 90
V+
Sbjct: 110 VQ 111
>gi|383854569|ref|XP_003702793.1| PREDICTED: paired mesoderm homeobox protein 2-like [Megachile
rotundata]
Length = 250
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 6 GASMVAVAYPNLYPGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFE 65
GA +V +P + ++ + Q S +++RR+RT FT QLE+LE F+
Sbjct: 59 GAQSSSVCFPTKF----SYDFSPSPGSEDRQSSGVGKRKQRRYRTTFTNFQLEELERAFQ 114
Query: 66 KTHYPDVVLREQLALKVDLKEERVE 90
KTHYPDV RE+LAL++ L E RV+
Sbjct: 115 KTHYPDVFFREELALRIQLTEARVQ 139
>gi|326925298|ref|XP_003208854.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
isoform 1 [Meleagris gallopavo]
Length = 367
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 60 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 114
Query: 89 VE 90
V+
Sbjct: 115 VQ 116
>gi|432104477|gb|ELK31095.1| Diencephalon/mesencephalon homeobox protein 1 [Myotis davidii]
Length = 378
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 55 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 109
Query: 89 VE 90
V+
Sbjct: 110 VQ 111
>gi|403291750|ref|XP_003936930.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 [Saimiri
boliviensis boliviensis]
Length = 378
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 55 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 109
Query: 89 VE 90
V+
Sbjct: 110 VQ 111
>gi|395858212|ref|XP_003801467.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 [Otolemur
garnettii]
Length = 379
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 55 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 109
Query: 89 VE 90
V+
Sbjct: 110 VQ 111
>gi|332808875|ref|XP_524575.3| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 2
[Pan troglodytes]
gi|397483203|ref|XP_003812793.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 1
[Pan paniscus]
Length = 377
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 55 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 109
Query: 89 VE 90
V+
Sbjct: 110 VQ 111
>gi|296488955|tpg|DAA31068.1| TPA: diencephalon/mesencephalon homeobox 1-like isoform 2 [Bos
taurus]
Length = 379
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 60 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 114
Query: 89 VE 90
V+
Sbjct: 115 VQ 116
>gi|332219855|ref|XP_003259073.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 1
[Nomascus leucogenys]
Length = 377
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 55 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 109
Query: 89 VE 90
V+
Sbjct: 110 VQ 111
>gi|385862194|ref|NP_001178121.2| diencephalon/mesencephalon homeobox protein 1 [Bos taurus]
gi|296488954|tpg|DAA31067.1| TPA: diencephalon/mesencephalon homeobox 1-like isoform 1 [Bos
taurus]
Length = 374
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 55 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 109
Query: 89 VE 90
V+
Sbjct: 110 VQ 111
>gi|281351948|gb|EFB27532.1| hypothetical protein PANDA_008151 [Ailuropoda melanoleuca]
Length = 383
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 61 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 115
Query: 89 VE 90
V+
Sbjct: 116 VQ 117
>gi|118094492|ref|XP_422451.2| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B isoform
2 [Gallus gallus]
Length = 367
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 60 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 114
Query: 89 VE 90
V+
Sbjct: 115 VQ 116
>gi|395730561|ref|XP_002810927.2| PREDICTED: diencephalon/mesencephalon homeobox protein 1 [Pongo
abelii]
Length = 377
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 55 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 109
Query: 89 VE 90
V+
Sbjct: 110 VQ 111
>gi|224058107|ref|XP_002195953.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
isoform 2 [Taeniopygia guttata]
Length = 362
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 55 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 109
Query: 89 VE 90
V+
Sbjct: 110 VQ 111
>gi|118094490|ref|XP_001234036.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B isoform
1 [Gallus gallus]
Length = 362
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 55 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 109
Query: 89 VE 90
V+
Sbjct: 110 VQ 111
>gi|27436936|ref|NP_757379.1| diencephalon/mesencephalon homeobox protein 1 isoform a [Homo
sapiens]
gi|22085908|gb|AAM90589.1|AF398527_1 homeoprotein MBX-S [Homo sapiens]
gi|119627312|gb|EAX06907.1| diencephalon/mesencephalon homeobox 1 [Homo sapiens]
gi|261858964|dbj|BAI46004.1| diencephalon/mesencephalon homeobox 1 [synthetic construct]
Length = 377
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 55 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 109
Query: 89 VE 90
V+
Sbjct: 110 VQ 111
>gi|301768196|ref|XP_002919510.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-like
isoform 1 [Ailuropoda melanoleuca]
Length = 377
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 55 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 109
Query: 89 VE 90
V+
Sbjct: 110 VQ 111
>gi|301608175|ref|XP_002933659.1| PREDICTED: homeobox protein ARX-like [Xenopus (Silurana)
tropicalis]
Length = 536
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV RE+LA+++DL E RV+
Sbjct: 299 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 346
>gi|440907315|gb|ELR57475.1| Diencephalon/mesencephalon homeobox protein 1 [Bos grunniens mutus]
Length = 380
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 61 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 115
Query: 89 VE 90
V+
Sbjct: 116 VQ 117
>gi|74100011|gb|AAZ99218.1| orthodenticle-like protein [Octopus bimaculoides]
Length = 313
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 41/53 (77%)
Query: 38 SAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
SA P+++RR RT F+ QL+ LEA F+KT YPD+ +RE++ALK++L E RV+
Sbjct: 85 SAANPRKQRRERTTFSRAQLDVLEALFQKTRYPDIFMREEVALKINLPESRVQ 137
>gi|395530279|ref|XP_003767224.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1
[Sarcophilus harrisii]
Length = 316
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 55 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 109
Query: 89 VE 90
V+
Sbjct: 110 VQ 111
>gi|348584674|ref|XP_003478097.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein goosecoid-2-like,
partial [Cavia porcellus]
Length = 191
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+R RRHRTIF+EEQL+ LEA F + YPDV RE+LA + L+EERVE
Sbjct: 110 RRTRRHRTIFSEEQLQALEALFVQNQYPDVGTRERLAGSIRLREERVE 157
>gi|297278622|ref|XP_001098052.2| PREDICTED: diencephalon/mesencephalon homeobox protein 1-like
[Macaca mulatta]
gi|355557967|gb|EHH14747.1| hypothetical protein EGK_00718 [Macaca mulatta]
gi|355745257|gb|EHH49882.1| hypothetical protein EGM_00614 [Macaca fascicularis]
Length = 382
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 60 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 114
Query: 89 VE 90
V+
Sbjct: 115 VQ 116
>gi|148697792|gb|EDL29739.1| aristaless related homeobox gene (Drosophila) [Mus musculus]
Length = 378
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV RE+LA+++DL E RV+
Sbjct: 142 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 189
>gi|449266387|gb|EMC77440.1| Diencephalon/mesencephalon homeobox protein 1-B [Columba livia]
Length = 362
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 55 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 109
Query: 89 VE 90
V+
Sbjct: 110 VQ 111
>gi|410967187|ref|XP_003990103.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 2
[Felis catus]
Length = 379
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 60 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 114
Query: 89 VE 90
V+
Sbjct: 115 VQ 116
>gi|259013307|ref|NP_001158375.1| retina and anterior neural fold homeobox [Saccoglossus kowalevskii]
gi|32307771|gb|AAP79282.1| retinal homeobox [Saccoglossus kowalevskii]
Length = 353
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 31 AMAASQHSAPPPKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERV 89
+M +++ PK+K RR+RT FT QL +LE FEK+HYPDV RE+LALKV+L E RV
Sbjct: 130 SMGNDNNNSDEPKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSREELALKVNLPEVRV 189
Query: 90 E 90
+
Sbjct: 190 Q 190
>gi|21671137|dbj|BAC02578.1| Otx2 [Labidochromis caeruleus]
gi|21671139|dbj|BAC02579.1| Otx2 [Haplochromis brownae]
gi|21671141|dbj|BAC02580.1| Otx2 [Astatoreochromis alluaudi]
gi|21671143|dbj|BAC02581.1| Otx2 [Tropheus duboisi]
Length = 245
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QL+ LEA F KT YPD+ +RE++ALK++L E RV+
Sbjct: 23 PRKQRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQ 71
>gi|359323036|ref|XP_850483.3| PREDICTED: uncharacterized protein LOC608374 [Canis lupus
familiaris]
Length = 280
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+R RRHRTIF+EEQL+ LEA F + YPDV RE+LA ++ L+EERVE
Sbjct: 200 RRTRRHRTIFSEEQLQALEALFVQNQYPDVGTRERLAGRIRLREERVE 247
>gi|149693674|ref|XP_001495032.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-like
isoform 2 [Equus caballus]
Length = 382
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 60 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 114
Query: 89 VE 90
V+
Sbjct: 115 VQ 116
>gi|444722646|gb|ELW63329.1| Homeobox protein OTX1 [Tupaia chinensis]
Length = 302
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QL+ LEA F KT YPD+ +RE++ALK++L E RV+
Sbjct: 35 PRKQRRERTTFTRSQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQ 83
>gi|405972244|gb|EKC37023.1| Retinal homeobox protein Rx [Crassostrea gigas]
Length = 987
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
K++RR+RT FT +QL +LEA F+ THYPD LREQ+A KVDL E RV+
Sbjct: 64 KKQRRNRTTFTSDQLRELEAVFQHTHYPDCTLREQIAEKVDLTEARVQ 111
>gi|326925300|ref|XP_003208855.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
isoform 2 [Meleagris gallopavo]
Length = 362
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 55 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 109
Query: 89 VE 90
V+
Sbjct: 110 VQ 111
>gi|117581730|gb|ABK41270.1| orthodenticle A [Acropora millepora]
Length = 227
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 18/89 (20%)
Query: 20 GYMTHAAATIAAMAASQHS--------------APP----PKRKRRHRTIFTEEQLEQLE 61
GY H + S H APP P+++RR RT FT+ QLE LE
Sbjct: 3 GYFGHVGGHVPPYTVSNHGLNHPAPNIDFFNPMAPPSCAHPRKQRRERTTFTKAQLEILE 62
Query: 62 ATFEKTHYPDVVLREQLALKVDLKEERVE 90
F KT YPD+ +RE++A+K++L E RV+
Sbjct: 63 ELFTKTKYPDIFMREEVAMKINLPESRVQ 91
>gi|410967185|ref|XP_003990102.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 1
[Felis catus]
Length = 374
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 55 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 109
Query: 89 VE 90
V+
Sbjct: 110 VQ 111
>gi|30348975|ref|NP_835457.2| diencephalon/mesencephalon homeobox protein 1-A isoform Mbx-S
[Danio rerio]
gi|22085905|gb|AAM90588.1|AF398526_1 homeoprotein Mbx-S [Danio rerio]
gi|134024855|gb|AAI34895.1| Diencephalon/mesencephalon homeobox 1a [Danio rerio]
Length = 383
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 55 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 109
Query: 89 VE 90
V+
Sbjct: 110 VQ 111
>gi|402854421|ref|XP_003891868.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 [Papio
anubis]
Length = 377
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 55 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 109
Query: 89 VE 90
V+
Sbjct: 110 VQ 111
>gi|149693672|ref|XP_001495012.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-like
isoform 1 [Equus caballus]
Length = 377
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 55 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 109
Query: 89 VE 90
V+
Sbjct: 110 VQ 111
>gi|23308671|ref|NP_694509.1| diencephalon/mesencephalon homeobox protein 1-A isoform Mbx-L
[Danio rerio]
gi|82243528|sp|Q8JI10.1|DMX1A_DANRE RecName: Full=Diencephalon/mesencephalon homeobox protein 1-A;
AltName: Full=Paired homeobox protein 1
gi|22085902|gb|AAM90587.1|AF398525_1 homeoprotein Mbx-L [Danio rerio]
gi|27475512|gb|AAL58532.1| paired homeobox protein [Danio rerio]
Length = 388
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 60 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 114
Query: 89 VE 90
V+
Sbjct: 115 VQ 116
>gi|213623920|gb|AAI70401.1| Aristaless-related homeobox 2 [Xenopus laevis]
gi|213625348|gb|AAI70403.1| Aristaless-related homeobox 2 [Xenopus laevis]
Length = 528
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV RE+LA+++DL E RV+
Sbjct: 291 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 338
>gi|432096706|gb|ELK27289.1| Homeobox protein OTX2 [Myotis davidii]
Length = 469
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QL+ LEA F KT YPD+ +RE++ALK++L E RV+
Sbjct: 35 PRKQRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQ 83
>gi|300796399|ref|NP_001179482.1| homeobox protein aristaless-like 3 [Bos taurus]
gi|296489406|tpg|DAA31519.1| TPA: aristaless-like homeobox 3-like [Bos taurus]
Length = 343
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT F+ QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 152 KKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLAVRTDLTEARVQ 198
>gi|395543713|ref|XP_003773758.1| PREDICTED: homeobox protein aristaless-like 4 [Sarcophilus
harrisii]
Length = 154
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 61 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 107
>gi|351700009|gb|EHB02928.1| Dorsal root ganglia homeobox protein [Heterocephalus glaber]
Length = 443
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 37 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 84
>gi|291398974|ref|XP_002715168.1| PREDICTED: diencephalon/mesencephalon homeobox 1 isoform 2
[Oryctolagus cuniculus]
Length = 382
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 60 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 114
Query: 89 VE 90
V+
Sbjct: 115 VQ 116
>gi|149639200|ref|XP_001516357.1| PREDICTED: retinal homeobox protein Rx1-like [Ornithorhynchus
anatinus]
Length = 231
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 40 PPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PP K+ RR+RT FT QL +LE FEK+HYPDV RE+LALKV+L E RV+
Sbjct: 33 PPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQ 83
>gi|148229045|ref|NP_001086450.1| aristaless related homeobox [Xenopus laevis]
gi|46395020|gb|AAS91656.1| aristaless-related homeobox 2 [Xenopus laevis]
Length = 528
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV RE+LA+++DL E RV+
Sbjct: 291 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 338
>gi|33326138|gb|AAQ08479.1| OTX5 protein [Gallotia stehlini]
Length = 271
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QL+ LEA F KT YPD+ +RE++ALK++L E RV+
Sbjct: 22 PRKQRRERTTFTRAQLDILEALFAKTRYPDIFMREEVALKINLPESRVQ 70
>gi|291398972|ref|XP_002715167.1| PREDICTED: diencephalon/mesencephalon homeobox 1 isoform 1
[Oryctolagus cuniculus]
Length = 377
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 55 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 109
Query: 89 VE 90
V+
Sbjct: 110 VQ 111
>gi|115678906|ref|XP_001199761.1| PREDICTED: uncharacterized protein LOC763703 [Strongylocentrotus
purpuratus]
Length = 477
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 41 PPKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P KRK RR+RT FT QLE+LE F KTHYPDV RE+LA++VDL E RV+
Sbjct: 179 PTKRKQRRYRTTFTSYQLEELERAFCKTHYPDVFTREELAMRVDLTEARVQ 229
>gi|167900486|ref|NP_001108138.1| aristaless related homeobox [Canis lupus familiaris]
Length = 574
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV RE+LA+++DL E RV+
Sbjct: 338 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 385
>gi|120975015|gb|ABM46803.1| ALX4 [Gorilla gorilla]
Length = 103
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 57 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 103
>gi|15004980|dbj|BAB62171.1| transcriptional factor [Leucopsarion petersii]
Length = 326
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QL+ LEA F KT YPD+ +RE++ALK++L E RV+
Sbjct: 35 PRKQRRERTTFTRSQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQ 83
>gi|62858983|ref|NP_001016021.1| homeobox protein otx5 [Xenopus (Silurana) tropicalis]
gi|123910225|sp|Q28EM7.1|OTX5_XENTR RecName: Full=Homeobox protein otx5; AltName: Full=Orthodenticle
homolog 5
gi|89271344|emb|CAJ83418.1| orthodenticle homolog 5 [Xenopus (Silurana) tropicalis]
gi|170284809|gb|AAI61339.1| cone-rod homeobox [Xenopus (Silurana) tropicalis]
gi|213624361|gb|AAI70992.1| cone-rod homeobox [Xenopus (Silurana) tropicalis]
gi|213625611|gb|AAI70967.1| cone-rod homeobox [Xenopus (Silurana) tropicalis]
Length = 290
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QL+ LEA F KT YPD+ +RE++ALK++L E RV+
Sbjct: 35 PRKQRRERTTFTRAQLDILEALFAKTRYPDIFMREEVALKINLPESRVQ 83
>gi|410901415|ref|XP_003964191.1| PREDICTED: dorsal root ganglia homeobox protein-like [Takifugu
rubripes]
Length = 307
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 40 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 87
>gi|26024213|ref|NP_031518.2| homeobox protein ARX [Mus musculus]
gi|27923957|sp|O35085.3|ARX_MOUSE RecName: Full=Homeobox protein ARX; AltName:
Full=Aristaless-related homeobox
gi|22163970|dbj|BAA28284.2| Arx homeoprotein [Mus musculus]
gi|30354717|gb|AAH52033.1| Aristaless related homeobox [Mus musculus]
Length = 564
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV RE+LA+++DL E RV+
Sbjct: 328 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 375
>gi|449673567|ref|XP_002165604.2| PREDICTED: uncharacterized protein LOC100200175 [Hydra
magnipapillata]
Length = 228
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 38/46 (82%)
Query: 45 KRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
KRRHRTIF++EQL LE F KTHYPDV++RE++A ++L EE+VE
Sbjct: 162 KRRHRTIFSDEQLNVLERLFNKTHYPDVIVREEIAGIINLTEEKVE 207
>gi|380021433|ref|XP_003694570.1| PREDICTED: uncharacterized protein LOC100865467 [Apis florea]
Length = 386
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE+LE+ F +THYPDV RE LA+K++L E RV+
Sbjct: 50 RKQRRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTEARVQ 97
>gi|348501013|ref|XP_003438065.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-A-like
[Oreochromis niloticus]
Length = 390
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 55 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 109
Query: 89 VE 90
V+
Sbjct: 110 VQ 111
>gi|440910593|gb|ELR60376.1| Homeobox protein ARX [Bos grunniens mutus]
Length = 503
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV RE+LA+++DL E RV+
Sbjct: 273 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 320
>gi|72084142|ref|XP_791442.1| PREDICTED: aristaless homeobox protein [Strongylocentrotus
purpuratus]
Length = 505
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 41 PPKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P KRK RR+RT FT QLE+LE F KTHYPDV RE+LA++VDL E RV+
Sbjct: 207 PTKRKQRRYRTTFTSYQLEELERAFCKTHYPDVFTREELAMRVDLTEARVQ 257
>gi|335305801|ref|XP_003360298.1| PREDICTED: homeobox protein ARX-like [Sus scrofa]
Length = 380
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV RE+LA+++DL E RV+
Sbjct: 144 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 191
>gi|432905591|ref|XP_004077452.1| PREDICTED: dorsal root ganglia homeobox protein-like [Oryzias
latipes]
Length = 308
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 40 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 87
>gi|3650206|dbj|BAA33409.1| LjOtxA [Lethenteron camtschaticum]
Length = 297
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 40 PPPKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P P RK RR RT FT QL+ LEA F KT YPD+ +RE++ALK++L E RV+
Sbjct: 33 PGPNRKQRRERTTFTRAQLDVLEALFSKTRYPDIFMREEVALKINLPESRVQ 84
>gi|345780839|ref|XP_003432043.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 1
[Canis lupus familiaris]
Length = 378
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 60 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 114
Query: 89 VE 90
V+
Sbjct: 115 VQ 116
>gi|328785265|ref|XP_001119852.2| PREDICTED: hypothetical protein LOC724120 [Apis mellifera]
Length = 523
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE+LE+ F +THYPDV RE LA+K++L E RV+
Sbjct: 187 RKQRRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTEARVQ 234
>gi|126010754|gb|AAI33553.1| VSX1 protein [Bos taurus]
Length = 236
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%)
Query: 39 APPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
AP ++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 158 APSKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAMKTELPEDRIQ 209
>gi|45383171|ref|NP_989830.1| transcription factor Crx [Gallus gallus]
gi|33339721|gb|AAQ14340.1|AF285171_1 transcription factor Crx [Gallus gallus]
Length = 327
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QL+ LEA F KT YPD+ +RE++ALK++L E RV+
Sbjct: 35 PRKQRRERTTFTRAQLDILEALFAKTRYPDIFMREEVALKINLPESRVQ 83
>gi|395838112|ref|XP_003791968.1| PREDICTED: homeobox protein ARX [Otolemur garnettii]
Length = 570
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV RE+LA+++DL E RV+
Sbjct: 334 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 381
>gi|345780841|ref|XP_853026.2| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 2
[Canis lupus familiaris]
Length = 373
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 55 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 109
Query: 89 VE 90
V+
Sbjct: 110 VQ 111
>gi|241849437|ref|XP_002415688.1| homeobox domain, putative [Ixodes scapularis]
gi|215509902|gb|EEC19355.1| homeobox domain, putative [Ixodes scapularis]
Length = 268
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 39/49 (79%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P +++RHRT FT QL++LE +F KTHYPD+ +RE+LA+++ L E RV+
Sbjct: 97 PAKQKRHRTRFTPAQLQELERSFSKTHYPDIFMREELAMRIGLTESRVQ 145
>gi|402909744|ref|XP_003917569.1| PREDICTED: homeobox protein ARX [Papio anubis]
Length = 424
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV RE+LA+++DL E RV+
Sbjct: 188 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 235
>gi|122892625|gb|ABM67377.1| ALX4 [Hylobates klossii]
Length = 144
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 55 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 101
>gi|23306483|gb|AAM09955.1| transcription factor Otx2 [Pleurodeles waltl]
Length = 272
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QL+ LEA F KT YPD+ +RE++ALK++L E RV+
Sbjct: 24 PRKQRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQ 72
>gi|340723862|ref|XP_003400306.1| PREDICTED: hypothetical protein LOC100648767 [Bombus terrestris]
Length = 571
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE+LE+ F +THYPDV RE LA+K++L E RV+
Sbjct: 235 RKQRRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTEARVQ 282
>gi|327276293|ref|XP_003222904.1| PREDICTED: homeobox protein otx5-like [Anolis carolinensis]
Length = 290
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QL+ LEA F KT YPD+ +RE++ALK++L E RV+
Sbjct: 35 PRKQRRERTTFTRAQLDILEALFAKTRYPDIFMREEVALKINLPESRVQ 83
>gi|47222353|emb|CAG05102.1| unnamed protein product [Tetraodon nigroviridis]
Length = 324
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/57 (56%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 35 SQHSAPPPKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
S+ SA KRK RRHRT+FT QLE+LE F++ HYPDV RE LA+K +L E+R++
Sbjct: 146 SKSSANSQKRKKRRHRTVFTSHQLEELEKAFQEAHYPDVYAREMLAMKTELPEDRIQ 202
>gi|322788777|gb|EFZ14345.1| hypothetical protein SINV_02202 [Solenopsis invicta]
Length = 125
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 27 ATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKE 86
T +A Q P K+KR HRT FT QL +LE F KTHYPD+ LRE++AL++ L E
Sbjct: 59 GTGSASGIGQGDDKPAKQKR-HRTRFTPAQLNELERCFGKTHYPDIFLREEIALRIGLTE 117
Query: 87 ERVE 90
RV+
Sbjct: 118 SRVQ 121
>gi|40254714|ref|NP_571325.2| homeobox protein OTX1 B [Danio rerio]
gi|28277468|gb|AAH45290.1| Orthodenticle homolog 1 [Danio rerio]
gi|182888722|gb|AAI64123.1| Otx1 protein [Danio rerio]
Length = 323
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QL+ LEA F KT YPD+ +RE++ALK++L E RV+
Sbjct: 35 PRKQRRERTTFTRSQLDILEALFAKTRYPDIFMREEVALKINLPESRVQ 83
>gi|405962470|gb|EKC28141.1| Homeobox protein otx5-B [Crassostrea gigas]
Length = 320
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 39/49 (79%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QL+ LE+ F+KT YPD+ +RE++ALK++L E RV+
Sbjct: 107 PRKQRRERTTFTRAQLDILESLFQKTRYPDIFMREEVALKINLPESRVQ 155
>gi|3024322|sp|Q91994.1|OTX1B_DANRE RecName: Full=Homeobox protein OTX1 B; Short=zOtx1; AltName:
Full=Orthodenticle homolog 1 B
gi|540242|gb|AAA78900.1| orthodenticle-related protein 1 [Danio rerio]
gi|633131|dbj|BAA05158.1| otx homeoprotein [Danio rerio]
Length = 323
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QL+ LEA F KT YPD+ +RE++ALK++L E RV+
Sbjct: 35 PRKQRRERTTFTRSQLDILEALFAKTRYPDIFMREEVALKINLPESRVQ 83
>gi|327270987|ref|XP_003220269.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
isoform 1 [Anolis carolinensis]
Length = 367
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 60 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 114
Query: 89 VE 90
V+
Sbjct: 115 VQ 116
>gi|149064496|gb|EDM14699.1| retina and anterior neural fold homeobox, isoform CRA_a [Rattus
norvegicus]
Length = 344
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 19 PGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQL 78
PG AA + + S+ PP K+ RR+RT FT QL +LE FEK+HYPDV RE+L
Sbjct: 115 PGLPVGPAAGDSKL--SEEEEPPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREEL 172
Query: 79 ALKVDLKEERVE 90
A KV+L E RV+
Sbjct: 173 AGKVNLPEVRVQ 184
>gi|426256164|ref|XP_004021711.1| PREDICTED: dorsal root ganglia homeobox protein [Ovis aries]
Length = 305
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 78
>gi|156615308|ref|XP_001647521.1| predicted protein [Nematostella vectensis]
gi|156214754|gb|EDO35732.1| predicted protein [Nematostella vectensis]
gi|226425747|gb|ACO53863.1| OtxC [Nematostella vectensis]
gi|386370768|gb|AFJ11252.1| OtxC [Nematostella vectensis]
Length = 229
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 39/50 (78%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PP+++RR RT FT+ QLE LE F KT YPD+ +RE++A+K++L E RV+
Sbjct: 37 PPRKQRRERTTFTKNQLEILEELFAKTRYPDIFMREEVAIKINLPESRVQ 86
>gi|18252581|gb|AAL66342.1|AF461038_1 paired-type homeobox Atx [Gallus gallus]
Length = 303
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 56 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 110
Query: 89 VE 90
V+
Sbjct: 111 VQ 112
>gi|397486104|ref|XP_003814171.1| PREDICTED: cone-rod homeobox protein [Pan paniscus]
Length = 321
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 37/49 (75%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LE F KT YPDV RE++ALK++L E RV+
Sbjct: 58 PRKQRRERTTFTRSQLEELETLFAKTQYPDVYAREEVALKINLPESRVQ 106
>gi|355562412|gb|EHH19006.1| hypothetical protein EGK_19626 [Macaca mulatta]
Length = 268
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 36 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 83
>gi|189236543|ref|XP_975529.2| PREDICTED: similar to homeobox protein [Tribolium castaneum]
Length = 405
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 38 SAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
S P P R RRHRT FT+EQL +LEA F K+HYPD+ RE+LA L E R++
Sbjct: 219 SCPTPAR-RRHRTTFTQEQLAELEAAFAKSHYPDIYCREELARSTKLNEARIQ 270
>gi|302564109|ref|NP_001181527.1| dorsal root ganglia homeobox protein [Macaca mulatta]
gi|402880151|ref|XP_003903676.1| PREDICTED: dorsal root ganglia homeobox protein [Papio anubis]
gi|355782761|gb|EHH64682.1| hypothetical protein EGM_17968 [Macaca fascicularis]
Length = 268
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 36 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 83
>gi|148230462|ref|NP_001090191.1| visual system homeobox 1 [Xenopus laevis]
gi|123905790|sp|Q0P031.1|VSX1_XENLA RecName: Full=Visual system homeobox 1; AltName: Full=Transcription
factor vsx1; AltName: Full=Xvsx1
gi|84104901|gb|ABC54559.1| visual system homeobox 1 protein [Xenopus laevis]
Length = 344
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/53 (54%), Positives = 40/53 (75%)
Query: 38 SAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
SA ++KRRHRT+FT QL++LE +F + HYPDV RE LALK +L E+R++
Sbjct: 143 SAQSKRKKRRHRTVFTAHQLDELEKSFNEAHYPDVYAREMLALKTELPEDRIQ 195
>gi|410054957|ref|XP_003953745.1| PREDICTED: visual system homeobox 1 [Pan troglodytes]
Length = 301
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 162 RKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQ 209
>gi|332258274|ref|XP_003278225.1| PREDICTED: dorsal root ganglia homeobox protein [Nomascus
leucogenys]
Length = 268
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 36 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 83
>gi|326205244|dbj|BAJ84004.1| homeobox protein OTX2 [Homo sapiens]
Length = 268
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QL+ LEA F KT YPD+ +RE++ALK++L E RV+
Sbjct: 14 PRKQRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQ 62
>gi|121484123|gb|ABM54404.1| ALX4 [Pan paniscus]
Length = 146
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 57 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 103
>gi|12746271|gb|AAK07422.1| retinal homeobox transcription factor Rx/rax [Rattus norvegicus]
Length = 333
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 19 PGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQL 78
PG AA + + S+ PP K+ RR+RT FT QL +LE FEK+HYPDV RE+L
Sbjct: 104 PGLPVGPAAGDSKL--SEEEEPPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREEL 161
Query: 79 ALKVDLKEERVE 90
A KV+L E RV+
Sbjct: 162 AGKVNLPEVRVQ 173
>gi|397518464|ref|XP_003829406.1| PREDICTED: visual system homeobox 1 isoform 3 [Pan paniscus]
Length = 301
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 162 RKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQ 209
>gi|326923683|ref|XP_003208064.1| PREDICTED: dorsal root ganglia homeobox protein-like [Meleagris
gallopavo]
Length = 299
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 70 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 117
>gi|297686443|ref|XP_002820758.1| PREDICTED: dorsal root ganglia homeobox protein [Pongo abelii]
Length = 268
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 36 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 83
>gi|72124445|ref|XP_787382.1| PREDICTED: paired mesoderm homeobox protein 1-like
[Strongylocentrotus purpuratus]
Length = 327
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/48 (64%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
KR+RR+RT FT QL+ LE FE+THYPD LRE+LA KVDL E RV+
Sbjct: 164 KRQRRNRTTFTTAQLDALEKVFERTHYPDAFLREELAKKVDLTEARVQ 211
>gi|355002415|gb|AER51832.1| cone-rod homeobox, partial [Hipposideros pomona]
Length = 285
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 37/49 (75%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QLE+LEA KT YPDV RE++ALK++L E RV+
Sbjct: 28 PRKQRRERTTFTRGQLEELEALLAKTQYPDVYAREEVALKINLPESRVQ 76
>gi|195433002|ref|XP_002064504.1| GK23788 [Drosophila willistoni]
gi|194160589|gb|EDW75490.1| GK23788 [Drosophila willistoni]
Length = 375
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 42 PKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PKRK RR+RT FT QLE+LE F +THYPDV RE+LA+K+ L E R++
Sbjct: 65 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQ 114
>gi|82395404|gb|ABB72466.1| CEH10-paired class homeobox protein [Nematostella vectensis]
gi|110339221|gb|ABG67874.1| CHX10, partial [Nematostella vectensis]
Length = 60
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 38/46 (82%)
Query: 45 KRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
KRRHRTIFT QLE+LE F+++HYPDV RE L+LK+DL E+R++
Sbjct: 1 KRRHRTIFTNYQLEELEKAFKESHYPDVYARENLSLKIDLPEDRIQ 46
>gi|332016702|gb|EGI57545.1| Homeobox protein orthopedia [Acromyrmex echinatior]
Length = 393
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 27 ATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKE 86
T +A A Q P K+KR HRT FT QL +LE F KTHYPD+ LRE++AL++ L E
Sbjct: 217 GTGSAAAIGQGDDKPAKQKR-HRTRFTPAQLNELERCFGKTHYPDIFLREEIALRIGLTE 275
Query: 87 ERVE 90
RV+
Sbjct: 276 SRVQ 279
>gi|348561355|ref|XP_003466478.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein ARX-like [Cavia
porcellus]
Length = 424
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV RE+LA+++DL E RV+
Sbjct: 241 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 288
>gi|16758430|ref|NP_446130.1| retinal homeobox protein Rx [Rattus norvegicus]
gi|18203127|sp|Q9JLT7.1|RX_RAT RecName: Full=Retinal homeobox protein Rx; AltName: Full=Retina and
anterior neural fold homeobox protein
gi|7384990|gb|AAF61631.1|AF135839_1 homeodomain protein RX [Rattus norvegicus]
gi|12746272|gb|AAK07423.1| retinal homeobox transcription factor Rx/rax [Rattus norvegicus]
gi|149064497|gb|EDM14700.1| retina and anterior neural fold homeobox, isoform CRA_b [Rattus
norvegicus]
Length = 342
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 19 PGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQL 78
PG AA + + S+ PP K+ RR+RT FT QL +LE FEK+HYPDV RE+L
Sbjct: 113 PGLPVGPAAGDSKL--SEEEEPPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREEL 170
Query: 79 ALKVDLKEERVE 90
A KV+L E RV+
Sbjct: 171 AGKVNLPEVRVQ 182
>gi|426364705|ref|XP_004049438.1| PREDICTED: dorsal root ganglia homeobox protein [Gorilla gorilla
gorilla]
Length = 268
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 36 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 83
>gi|327270989|ref|XP_003220270.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
isoform 2 [Anolis carolinensis]
Length = 362
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 55 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 109
Query: 89 VE 90
V+
Sbjct: 110 VQ 111
>gi|114635169|ref|XP_001138723.1| PREDICTED: dorsal root ganglia homeobox protein [Pan troglodytes]
Length = 268
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 36 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 83
>gi|291407255|ref|XP_002720021.1| PREDICTED: aristaless related homeobox [Oryctolagus cuniculus]
Length = 454
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV RE+LA+++DL E RV+
Sbjct: 218 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 265
>gi|372266156|ref|NP_001243201.1| visual system homeobox 1 isoform d [Homo sapiens]
gi|112820194|gb|ABI23978.1| visual system homeobox 1 transcript variant 6 [Homo sapiens]
Length = 301
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 162 RKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQ 209
>gi|424034|pir||A46403 transcription factor with prd-type homeo domain and Pro/ Gln-rich
domain al - fruit fly (Drosophila melanogaster)
Length = 384
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 42 PKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PKRK RR+RT FT QLE+LE F +THYPDV RE+LA+K+ L E R++
Sbjct: 81 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQ 130
>gi|348560754|ref|XP_003466178.1| PREDICTED: dorsal root ganglia homeobox protein-like [Cavia
porcellus]
Length = 263
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 78
>gi|397475296|ref|XP_003809079.1| PREDICTED: dorsal root ganglia homeobox protein [Pan paniscus]
Length = 265
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 33 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 80
>gi|345792953|ref|XP_848719.2| PREDICTED: dorsal root ganglia homeobox protein [Canis lupus
familiaris]
Length = 287
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 55 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 102
>gi|443692141|gb|ELT93814.1| hypothetical protein CAPTEDRAFT_99648, partial [Capitella teleta]
Length = 107
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Query: 26 AATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLK 85
A + ++SQ S P +++RHRT FT Q+ +LE F KTHYPD+ +RE+LAL++ L
Sbjct: 31 AGATSNCSSSQES--PGSKQKRHRTRFTPAQINELEHAFSKTHYPDIFMREELALRIGLT 88
Query: 86 EERVE 90
E RV+
Sbjct: 89 ESRVQ 93
>gi|10567179|dbj|BAB16104.1| orthodenticle [Apostichopus japonicus]
Length = 338
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 38/50 (76%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PP+++RR RT FT QL+ LE F KT YPD+ +RE++ALK++L E RV+
Sbjct: 82 PPRKQRRERTTFTRAQLDVLEDLFAKTRYPDIFMREEVALKINLPESRVQ 131
>gi|350422605|ref|XP_003493225.1| PREDICTED: hypothetical protein LOC100742723 [Bombus impatiens]
Length = 563
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE+LE+ F +THYPDV RE LA+K++L E RV+
Sbjct: 237 RKQRRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTEARVQ 284
>gi|340724400|ref|XP_003400570.1| PREDICTED: hypothetical protein LOC100651262 [Bombus terrestris]
gi|350397686|ref|XP_003484956.1| PREDICTED: hypothetical protein LOC100748675 [Bombus impatiens]
Length = 251
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 26/113 (23%)
Query: 3 IATGASMVAVAYPN-LYPGYMTHAAATIAAMAASQHSA------------PPP------- 42
++TGA + + P+ + PG + A +A + +Q S+ P P
Sbjct: 28 VSTGAIVASAGAPDEINPGGDLQSTA-LAGLIGAQSSSVCFPTKFSYDFSPSPGSEDRQS 86
Query: 43 -----KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV RE+LAL++ L E RV+
Sbjct: 87 TGVGKRKQRRYRTTFTNFQLEELERAFQKTHYPDVFFREELALRIQLTEARVQ 139
>gi|18252583|gb|AAL66343.1|AF461039_1 paired-type homeobox Atx [Mus musculus]
Length = 282
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 29 IAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEER 88
+ A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L E R
Sbjct: 60 LEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEAR 114
Query: 89 VE 90
V+
Sbjct: 115 VQ 116
>gi|410917546|ref|XP_003972247.1| PREDICTED: homeobox protein OTX1 B-like [Takifugu rubripes]
Length = 327
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QL+ LEA F KT YPD+ +RE++ALK++L E RV+
Sbjct: 35 PRKQRRERTTFTRMQLDILEALFAKTRYPDIFMREEVALKINLPESRVQ 83
>gi|11056038|ref|NP_055403.2| visual system homeobox 1 isoform a [Homo sapiens]
gi|25009572|sp|Q9NZR4.2|VSX1_HUMAN RecName: Full=Visual system homeobox 1; AltName: Full=Homeodomain
protein RINX; AltName: Full=Retinal inner nuclear layer
homeobox protein; AltName: Full=Transcription factor
VSX1
gi|9802263|gb|AAF99656.1|AF251033_1 homeodomain protein RINX, L1 isoform [Homo sapiens]
gi|11055960|gb|AAF37425.2|AF176797_1 transcription factor VSX1 [Homo sapiens]
gi|112820184|gb|ABI23973.1| visual system homeobox 1 transcript variant 1 [Homo sapiens]
gi|116496989|gb|AAI26229.1| Visual system homeobox 1 [Homo sapiens]
gi|119630509|gb|EAX10104.1| visual system homeobox 1 homolog, CHX10-like (zebrafish), isoform
CRA_a [Homo sapiens]
gi|223460502|gb|AAI36498.1| Visual system homeobox 1 [Homo sapiens]
Length = 365
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 162 RKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQ 209
>gi|403276711|ref|XP_003930032.1| PREDICTED: dorsal root ganglia homeobox protein [Saimiri
boliviensis boliviensis]
Length = 268
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 36 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 83
>gi|328703501|ref|XP_003242223.1| PREDICTED: retinal homeobox protein Rx1-like [Acyrthosiphon pisum]
Length = 302
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 39/57 (68%)
Query: 34 ASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+ +H P++ RR RT FT QL QLE FEKT YPDV RE+LAL++DL E RV+
Sbjct: 52 SDEHDDDKPRKVRRSRTTFTTYQLHQLERAFEKTQYPDVFTREELALRLDLSEARVQ 108
>gi|344274342|ref|XP_003408976.1| PREDICTED: LOW QUALITY PROTEIN: dorsal root ganglia homeobox
protein-like [Loxodonta africana]
Length = 268
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 36 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 83
>gi|296220129|ref|XP_002756185.1| PREDICTED: dorsal root ganglia homeobox protein [Callithrix
jacchus]
Length = 282
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 50 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 97
>gi|395858717|ref|XP_003801706.1| PREDICTED: dorsal root ganglia homeobox protein [Otolemur
garnettii]
Length = 263
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 78
>gi|162296340|gb|ABX84006.1| orthodenticle 2 [Carassius auratus]
Length = 210
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QL+ LEA F KT YPD+ +RE++ALK++L E RV+
Sbjct: 30 PRKQRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQ 78
>gi|426391201|ref|XP_004061969.1| PREDICTED: visual system homeobox 1 isoform 2 [Gorilla gorilla
gorilla]
Length = 301
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 162 RKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQ 209
>gi|383857829|ref|XP_003704406.1| PREDICTED: uncharacterized protein LOC100876054 [Megachile
rotundata]
Length = 503
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE+LE+ F +THYPDV RE LA+K++L E RV+
Sbjct: 174 RKQRRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTEARVQ 221
>gi|18202522|sp|Q26657.2|ALX_STRPU RecName: Full=Aristaless homeobox protein; Short=ALX; AltName:
Full=SpPrx-1
gi|2055317|dbj|BAA19774.1| homeobox [Strongylocentrotus purpuratus]
Length = 327
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 39/51 (76%)
Query: 40 PPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P +++RR+RT FT QLE+LE F KTHYPDV RE+LA++VDL E RV+
Sbjct: 207 PTKRKQRRYRTTFTSYQLEELERAFCKTHYPDVFTREELAMRVDLTEARVQ 257
>gi|449784876|ref|NP_001263380.1| dorsal root ganglia homeobox protein [Homo sapiens]
gi|158513808|sp|A6NNA5.1|DRGX_HUMAN RecName: Full=Dorsal root ganglia homeobox protein; AltName:
Full=Paired-related homeobox protein-like 1
gi|119613506|gb|EAW93100.1| hCG32744 [Homo sapiens]
gi|261861218|dbj|BAI47131.1| dorsal root ganglia homeobox [synthetic construct]
Length = 263
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 78
>gi|395857545|ref|XP_003801152.1| PREDICTED: visual system homeobox 1 [Otolemur garnettii]
Length = 365
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 162 RKKRRHRTVFTAHQLEELEKAFGEAHYPDVYAREMLAVKTELPEDRIQ 209
>gi|338717161|ref|XP_001500343.3| PREDICTED: dorsal root ganglia homeobox protein-like [Equus
caballus]
Length = 265
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 33 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 80
>gi|426391199|ref|XP_004061968.1| PREDICTED: visual system homeobox 1 isoform 1 [Gorilla gorilla
gorilla]
Length = 365
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 162 RKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQ 209
>gi|391340589|ref|XP_003744622.1| PREDICTED: retinal homeobox protein Rx3-like [Metaseiulus
occidentalis]
Length = 301
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Query: 42 PKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+RK RR+RT FT QLE+LE F +THYPDV RE+LA++VDL E RV+
Sbjct: 71 PRRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAVRVDLTEARVQ 120
>gi|195470248|ref|XP_002087420.1| GE16769 [Drosophila yakuba]
gi|194173521|gb|EDW87132.1| GE16769 [Drosophila yakuba]
Length = 410
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 42 PKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PKRK RR+RT FT QLE+LE F +THYPDV RE+LA+K+ L E R++
Sbjct: 81 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQ 130
>gi|149034142|gb|EDL88912.1| paired related homeobox protein-like 1, isoform CRA_b [Rattus
norvegicus]
Length = 263
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 78
>gi|195388310|ref|XP_002052823.1| GJ17771 [Drosophila virilis]
gi|194149280|gb|EDW64978.1| GJ17771 [Drosophila virilis]
Length = 381
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 42 PKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PKRK RR+RT FT QLE+LE F +THYPDV RE+LA+K+ L E R++
Sbjct: 68 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQ 117
>gi|431901319|gb|ELK08346.1| Dorsal root ganglia homeobox protein [Pteropus alecto]
Length = 381
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 35 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 82
>gi|270005291|gb|EFA01739.1| hypothetical protein TcasGA2_TC007335 [Tribolium castaneum]
Length = 235
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 38 SAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
S P P R RRHRT FT+EQL +LEA F K+HYPD+ RE+LA L E R++
Sbjct: 58 SCPTPAR-RRHRTTFTQEQLAELEAAFAKSHYPDIYCREELARSTKLNEARIQ 109
>gi|158297213|ref|XP_317481.4| AGAP007985-PA [Anopheles gambiae str. PEST]
gi|157015086|gb|EAA12409.4| AGAP007985-PA [Anopheles gambiae str. PEST]
Length = 354
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 42 PKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PKRK RR+RT FT QLE+LE F +THYPDV RE+LA+K+ L E R++
Sbjct: 75 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQ 124
>gi|317419844|emb|CBN81880.1| Aristaless-related homeobox protein [Dicentrarchus labrax]
Length = 463
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV RE+LA+++DL E RV+
Sbjct: 219 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 266
>gi|317373355|sp|Q8BYH0.2|DRGX_MOUSE RecName: Full=Dorsal root ganglia homeobox protein; AltName:
Full=Dorsal root ganglion 11; AltName: Full=Homeobox
protein DRG11; AltName: Full=Paired-related homeobox
protein-like 1
gi|188036459|gb|ACD45984.1| paired related homeobox protein-like 1 [Mus musculus]
Length = 263
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 78
>gi|307192284|gb|EFN75571.1| Homeobox protein orthopedia [Harpegnathos saltator]
Length = 132
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 22 MTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALK 81
MT A AA+ P +++RHRT FT QL +LE F KTHYPD+ LRE++AL+
Sbjct: 55 MTMPGAGSAAVIG--QGDDKPAKQKRHRTRFTPAQLNELERCFGKTHYPDIFLREEIALR 112
Query: 82 VDLKEERVE 90
+ L E RV+
Sbjct: 113 IGLTESRVQ 121
>gi|195118282|ref|XP_002003669.1| GI21624 [Drosophila mojavensis]
gi|193914244|gb|EDW13111.1| GI21624 [Drosophila mojavensis]
Length = 397
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 42 PKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PKRK RR+RT FT QLE+LE F +THYPDV RE+LA+K+ L E R++
Sbjct: 68 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQ 117
>gi|40806216|ref|NP_955457.1| visual system homeobox 1 isoform b [Homo sapiens]
gi|9802265|gb|AAF99657.1|AF251034_1 homeodomain protein RINX, S1 isoform [Homo sapiens]
gi|112820186|gb|ABI23974.1| visual system homeobox 1 transcript variant 2 [Homo sapiens]
Length = 239
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 162 RKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQ 209
>gi|24580629|ref|NP_722629.1| aristaless [Drosophila melanogaster]
gi|60416352|sp|Q06453.2|AL_DROME RecName: Full=Homeobox protein aristaless
gi|7296213|gb|AAF51505.1| aristaless [Drosophila melanogaster]
gi|21464440|gb|AAM52023.1| RE68460p [Drosophila melanogaster]
gi|220942482|gb|ACL83784.1| al-PA [synthetic construct]
gi|220952686|gb|ACL88886.1| al-PA [synthetic construct]
Length = 408
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 42 PKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PKRK RR+RT FT QLE+LE F +THYPDV RE+LA+K+ L E R++
Sbjct: 81 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQ 130
>gi|195163990|ref|XP_002022832.1| GL14778 [Drosophila persimilis]
gi|194104855|gb|EDW26898.1| GL14778 [Drosophila persimilis]
Length = 596
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 38 SAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
S P P R RRHRT FT+EQL +LEA F K+HYPD+ RE+LA L E R++
Sbjct: 416 SCPTPAR-RRHRTTFTQEQLAELEAAFAKSHYPDIYCREELARTTKLNEARIQ 467
>gi|170592395|ref|XP_001900954.1| hypothetical protein Bm1_47465 [Brugia malayi]
gi|158591649|gb|EDP30254.1| hypothetical protein Bm1_47465 [Brugia malayi]
Length = 154
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 9 MVAVAYPNLYPGYMTHAAATIAAMAASQHSAPPPKRK-RRHRTIFTEEQLEQLEATFEKT 67
M + Y ++ M A+ I ++ +S + KRK RRHRTIFT+ Q+++LE F++
Sbjct: 1 MSGIDYASIRSNSMFGASTAITSIPSSSNEKSISKRKKRRHRTIFTQFQVDELEKAFQEA 60
Query: 68 HYPDVVLREQLALKVDLKEERVE 90
HYPD+ RE LA+K ++ +R++
Sbjct: 61 HYPDMYARELLAMKTEIAVDRIQ 83
>gi|290262|gb|AAA28840.1| prd-like homeobox protein [Drosophila melanogaster]
Length = 408
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 42 PKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PKRK RR+RT FT QLE+LE F +THYPDV RE+LA+K+ L E R++
Sbjct: 81 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQ 130
>gi|6503072|gb|AAF14575.1| goosecoid [Hydra vulgaris]
Length = 205
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 38/46 (82%)
Query: 45 KRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
KRRHRTIF++EQL LE F KTHYPDV++RE++A ++L EE+VE
Sbjct: 139 KRRHRTIFSDEQLNVLERLFNKTHYPDVIVREEVAGIINLTEEKVE 184
>gi|301620871|ref|XP_002939787.1| PREDICTED: dorsal root ganglia homeobox protein-like [Xenopus
(Silurana) tropicalis]
Length = 263
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 32 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 79
>gi|297260462|ref|XP_002798304.1| PREDICTED: visual system homeobox 1-like, partial [Macaca mulatta]
Length = 354
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 151 RKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQ 198
>gi|291222403|ref|XP_002731203.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 379
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 36/49 (73%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P++ RR RT FT QL QLE FEKT YPDV RE+LAL++DL E RV+
Sbjct: 166 PRKVRRSRTTFTTYQLHQLERAFEKTQYPDVFTREELALRLDLSEARVQ 214
>gi|194762980|ref|XP_001963612.1| GF20486 [Drosophila ananassae]
gi|190629271|gb|EDV44688.1| GF20486 [Drosophila ananassae]
Length = 731
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 38 SAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
S P P R RRHRT FT+EQL +LEA F K+HYPD+ RE+LA L E R++
Sbjct: 551 SCPTPAR-RRHRTTFTQEQLAELEAAFAKSHYPDIYCREELARTTKLNEARIQ 602
>gi|195350083|ref|XP_002041571.1| GM16736 [Drosophila sechellia]
gi|195575531|ref|XP_002077631.1| GD23020 [Drosophila simulans]
gi|194123344|gb|EDW45387.1| GM16736 [Drosophila sechellia]
gi|194189640|gb|EDX03216.1| GD23020 [Drosophila simulans]
Length = 410
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 42 PKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PKRK RR+RT FT QLE+LE F +THYPDV RE+LA+K+ L E R++
Sbjct: 81 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQ 130
>gi|195117252|ref|XP_002003163.1| GI23866 [Drosophila mojavensis]
gi|193913738|gb|EDW12605.1| GI23866 [Drosophila mojavensis]
Length = 623
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE+LE F +THYPDV RE LA+K++L E RV+
Sbjct: 67 RKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQ 114
>gi|395752027|ref|XP_003779346.1| PREDICTED: visual system homeobox 1 isoform 2 [Pongo abelii]
Length = 301
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 162 RKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQ 209
>gi|363735465|ref|XP_001234656.2| PREDICTED: dorsal root ganglia homeobox protein [Gallus gallus]
Length = 260
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 78
>gi|348512008|ref|XP_003443535.1| PREDICTED: aristaless-related homeobox protein-like [Oreochromis
niloticus]
Length = 466
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV RE+LA+++DL E RV+
Sbjct: 220 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 267
>gi|295855150|gb|ADG46024.1| Vsx1 A2 [Carassius auratus]
gi|316936358|gb|ADU60208.1| vsx1A2 [Carassius auratus]
Length = 340
Score = 65.5 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 149 RKKRRHRTVFTSHQLEELEKAFHEAHYPDVYAREMLAMKTELPEDRIQ 196
>gi|221113766|ref|XP_002168027.1| PREDICTED: homeobox protein DLX-1-like [Hydra magnipapillata]
Length = 318
Score = 65.5 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 40/55 (72%)
Query: 36 QHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
Q + P +KRR+RT FT QL++LE F +THYPD+ LRE++A+K+ L E R++
Sbjct: 138 QQALSMPSKKRRYRTTFTTHQLDELERVFNRTHYPDIFLREEMAVKLGLTEARIQ 192
>gi|410908863|ref|XP_003967910.1| PREDICTED: aristaless-related homeobox protein-like [Takifugu
rubripes]
Length = 463
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV RE+LA+++DL E RV+
Sbjct: 219 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 266
>gi|194892982|ref|XP_001977782.1| GG18050 [Drosophila erecta]
gi|190649431|gb|EDV46709.1| GG18050 [Drosophila erecta]
Length = 769
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 38 SAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
S P P R RRHRT FT+EQL +LEA F K+HYPD+ RE+LA L E R++
Sbjct: 529 SCPTPAR-RRHRTTFTQEQLAELEAAFAKSHYPDIYCREELARTTKLNEARIQ 580
>gi|171544937|ref|NP_001116385.1| aristaless-related homeobox protein [Oryzias latipes]
gi|157410507|gb|ABV53977.1| aristaless-related homeobox protein [Oryzias latipes]
Length = 464
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV RE+LA+++DL E RV+
Sbjct: 220 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 267
>gi|406719566|dbj|BAM45082.1| dorsal root ganglia homeobox, partial [Pelodiscus sinensis]
Length = 199
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 22 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 69
>gi|363743158|ref|XP_003642783.1| PREDICTED: homeobox protein aristaless-like 3-like [Gallus gallus]
Length = 261
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT F+ QLE+LE F+KTHYPDV REQLAL+ +L E RV+
Sbjct: 74 KKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTELSEARVQ 120
>gi|157137459|ref|XP_001663998.1| hypothetical protein AaeL_AAEL013809 [Aedes aegypti]
gi|108869695|gb|EAT33920.1| AAEL013809-PA [Aedes aegypti]
Length = 358
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT F QL++LE F++THYPDV RE+LA+++DL E RV+
Sbjct: 3 RKQRRYRTTFNSLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQ 50
>gi|47228865|emb|CAG09380.1| unnamed protein product [Tetraodon nigroviridis]
Length = 268
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 24 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 71
>gi|291404049|ref|XP_002718385.1| PREDICTED: paired related homeobox protein-like 1-like
[Oryctolagus cuniculus]
Length = 269
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 37 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 84
>gi|125820954|ref|XP_001340966.1| PREDICTED: aristaless-like homeobox 4a [Danio rerio]
Length = 368
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/47 (65%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 174 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 220
>gi|307211957|gb|EFN87869.1| Dorsal root ganglia homeobox protein [Harpegnathos saltator]
Length = 356
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE+LE+ F +THYPDV RE LA+K++L E RV+
Sbjct: 21 RKQRRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTEARVQ 68
>gi|18858285|ref|NP_571459.1| aristaless-related homeobox protein [Danio rerio]
gi|18202032|sp|O42115.1|ARX_DANRE RecName: Full=Aristaless-related homeobox protein; Short=ARX
gi|2317261|dbj|BAA21764.1| Arx homeoprotein [Danio rerio]
gi|190337749|gb|AAI63865.1| Aristaless related homeobox [Danio rerio]
gi|190337753|gb|AAI63872.1| Aristaless related homeobox [Danio rerio]
Length = 453
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV RE+LA+++DL E RV+
Sbjct: 213 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 260
>gi|357627252|gb|EHJ76994.1| orthopedia [Danaus plexippus]
Length = 269
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 37/49 (75%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P +++RHRT FT QL +LE F KTHYPD+ +RE++A+++ L E RV+
Sbjct: 38 PAKQKRHRTRFTPAQLNELERCFTKTHYPDIFMREEIAMRIGLTESRVQ 86
>gi|195448076|ref|XP_002071499.1| GK25107 [Drosophila willistoni]
gi|194167584|gb|EDW82485.1| GK25107 [Drosophila willistoni]
Length = 638
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 38 SAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
S P P R RRHRT FT+EQL +LEA F K+HYPD+ RE+LA L E R++
Sbjct: 458 SCPTPAR-RRHRTTFTQEQLAELEAAFAKSHYPDIYCREELARTTKLNEARIQ 509
>gi|148692895|gb|EDL24842.1| paired related homeobox protein-like 1 [Mus musculus]
Length = 295
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 73 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 120
>gi|345482144|ref|XP_001603519.2| PREDICTED: hypothetical protein LOC100119801 [Nasonia vitripennis]
Length = 461
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE+LE+ F +THYPDV RE LA+K++L E RV+
Sbjct: 94 RKQRRNRTTFTLQQLEELESAFVQTHYPDVFTREDLAMKINLTEARVQ 141
>gi|73912705|ref|NP_001027541.1| homeobox protein OTX isoform beta [Strongylocentrotus purpuratus]
gi|73912707|ref|NP_001027540.1| homeobox protein OTX isoform beta [Strongylocentrotus purpuratus]
Length = 295
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PP+++RR RT FT QL+ LE F +T YPD+ +RE++A+K++L E RV+
Sbjct: 51 PPRKQRRERTTFTRAQLDVLETLFSRTRYPDIFMREEVAMKINLPESRVQ 100
>gi|14141686|dbj|BAB55640.1| late type orthodenticle-related protein [Hemicentrotus
pulcherrimus]
Length = 295
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PP+++RR RT FT QL+ LE F +T YPD+ +RE++A+K++L E RV+
Sbjct: 51 PPRKQRRERTTFTRAQLDVLETLFSRTRYPDIFMREEVAMKINLPESRVQ 100
>gi|326919723|ref|XP_003206127.1| PREDICTED: paired box protein Pax-6-like [Meleagris gallopavo]
Length = 377
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 43 KRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
KRK +R+RT FT+EQ+E LE FE+THYPDV RE+LA K+DL E R++
Sbjct: 168 KRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ 216
>gi|410901020|ref|XP_003963994.1| PREDICTED: visual system homeobox 1-like [Takifugu rubripes]
Length = 366
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/57 (56%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 35 SQHSAPPPKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
S+ SA KRK RRHRT+FT QLE+LE F++ HYPDV RE LA+K +L E+R++
Sbjct: 146 SKSSANSQKRKKRRHRTVFTSHQLEELEKAFQEAHYPDVYAREMLAMKTELPEDRIQ 202
>gi|195059442|ref|XP_001995638.1| GH17865 [Drosophila grimshawi]
gi|193896424|gb|EDV95290.1| GH17865 [Drosophila grimshawi]
Length = 711
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 38 SAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
S P P R RRHRT FT+EQL +LEA F K+HYPD+ RE+LA L E R++
Sbjct: 491 SCPTPAR-RRHRTTFTQEQLAELEAAFAKSHYPDIYCREELARTTKLNEARIQ 542
>gi|292628755|ref|XP_002667096.1| PREDICTED: aristaless-related homeobox protein-like [Danio rerio]
Length = 385
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV RE+LA+++DL E RV+
Sbjct: 160 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 207
>gi|443683114|gb|ELT87482.1| hypothetical protein CAPTEDRAFT_113148 [Capitella teleta]
Length = 54
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 39/49 (79%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV RE+LAL++DL E RV+
Sbjct: 2 KRKQRRYRTTFTSYQLEELEKAFQKTHYPDVFCREELALRIDLTEARVQ 50
>gi|440902039|gb|ELR52885.1| Dorsal root ganglia homeobox protein, partial [Bos grunniens
mutus]
Length = 257
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 25 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 72
>gi|353229812|emb|CCD75983.1| putative orthopedia homeobox protein [Schistosoma mansoni]
Length = 1097
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/47 (55%), Positives = 36/47 (76%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RHRT FT QL +LE F KTHYPD+ +RE+LAL++ L E RV+
Sbjct: 730 KQKRHRTRFTPNQLNELERAFSKTHYPDIFMREELALRIGLTESRVQ 776
>gi|422919068|pdb|2M0C|A Chain A, Solution Nmr Structure Of Homeobox Domain Of Human Alx4,
Northeast Structural Genomics Consortium (Nesg) Target
Hr4490c
Length = 75
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 8 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 54
>gi|397518462|ref|XP_003829405.1| PREDICTED: visual system homeobox 1 isoform 2 [Pan paniscus]
gi|410054951|ref|XP_003953742.1| PREDICTED: visual system homeobox 1 [Pan troglodytes]
Length = 280
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 162 RKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQ 209
>gi|321464405|gb|EFX75413.1| hypothetical protein DAPPUDRAFT_323335 [Daphnia pulex]
Length = 237
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 38 SAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
S P P R RRHRT FT+EQL++LEA F K+HYPD+ RE+LA L E R++
Sbjct: 48 SCPTPAR-RRHRTTFTQEQLQELEAAFAKSHYPDIYCREELARVTKLNEARIQ 99
>gi|195032675|ref|XP_001988540.1| GH11220 [Drosophila grimshawi]
gi|193904540|gb|EDW03407.1| GH11220 [Drosophila grimshawi]
Length = 376
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 42 PKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PKRK RR+RT FT QLE+LE F +THYPDV RE+LA+K+ L E R++
Sbjct: 66 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQ 115
>gi|432852270|ref|XP_004067164.1| PREDICTED: homeobox protein aristaless-like 4-like [Oryzias
latipes]
Length = 367
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/47 (65%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 176 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 222
>gi|432904372|ref|XP_004077298.1| PREDICTED: visual system homeobox 1-like [Oryzias latipes]
Length = 321
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F++ HYPDV RE LA+K +L E+R++
Sbjct: 118 RKKRRHRTVFTSHQLEELEKAFQEAHYPDVYAREMLAMKTELPEDRIQ 165
>gi|224052522|ref|XP_002187168.1| PREDICTED: dorsal root ganglia homeobox protein [Taeniopygia
guttata]
Length = 261
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV +E+LALK++L E RV+
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTKEELALKINLTEARVQ 78
>gi|291230672|ref|XP_002735289.1| PREDICTED: dorsal root ganglia homeobox-like [Saccoglossus
kowalevskii]
Length = 310
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE+LE F KTHYPDV RE LA+K++L E RV+
Sbjct: 47 RKQRRNRTTFTLQQLEELENAFAKTHYPDVFTREDLAMKINLTEARVQ 94
>gi|410975579|ref|XP_003994208.1| PREDICTED: dorsal root ganglia homeobox protein [Felis catus]
Length = 263
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 78
>gi|402883438|ref|XP_003905225.1| PREDICTED: visual system homeobox 1 isoform 3 [Papio anubis]
Length = 301
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 162 RKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQ 209
>gi|402883434|ref|XP_003905223.1| PREDICTED: visual system homeobox 1 isoform 1 [Papio anubis]
Length = 365
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 162 RKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQ 209
>gi|296200374|ref|XP_002747576.1| PREDICTED: visual system homeobox 1 [Callithrix jacchus]
Length = 364
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 161 RKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQ 208
>gi|229915295|gb|ACQ90718.1| orthodenticle protein [Artemia sinica]
Length = 354
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 37 HSAPPPKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
H+ P RK RR RT FT QL+ LEA F KT YPD+ +RE++ALK++L E RV+
Sbjct: 54 HTGPNNSRKQRRERTTFTRGQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQ 108
>gi|112820188|gb|ABI23975.1| visual system homeobox 1 transcript variant 3 [Homo sapiens]
Length = 280
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 162 RKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQ 209
>gi|47194703|emb|CAF87132.1| unnamed protein product [Tetraodon nigroviridis]
Length = 244
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 5/66 (7%)
Query: 25 AAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDL 84
A + A SQH +++RR RT FT +QLE LE TF+KTHYPDVV+RE+LA+ +L
Sbjct: 56 ADIILEARYGSQH-----RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNL 110
Query: 85 KEERVE 90
E RV+
Sbjct: 111 PEARVQ 116
>gi|328788663|ref|XP_001120833.2| PREDICTED: paired mesoderm homeobox protein 2B [Apis mellifera]
Length = 196
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 33 AASQHSAPPPKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
A S H KRK RR RT FT QL++LE F++THYPD+ RE++A+K+DL E RV+
Sbjct: 125 AYSGHDGLAEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 183
>gi|281346213|gb|EFB21797.1| hypothetical protein PANDA_016919 [Ailuropoda melanoleuca]
Length = 252
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 20 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 67
>gi|195147252|ref|XP_002014594.1| GL18872 [Drosophila persimilis]
gi|194106547|gb|EDW28590.1| GL18872 [Drosophila persimilis]
Length = 397
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 42 PKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PKRK RR+RT FT QLE+LE F +THYPDV RE+LA+K+ L E R++
Sbjct: 79 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQ 128
>gi|125985361|ref|XP_001356444.1| GA17785 [Drosophila pseudoobscura pseudoobscura]
gi|54644768|gb|EAL33508.1| GA17785 [Drosophila pseudoobscura pseudoobscura]
Length = 395
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 42 PKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PKRK RR+RT FT QLE+LE F +THYPDV RE+LA+K+ L E R++
Sbjct: 79 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQ 128
>gi|410054953|ref|XP_003953743.1| PREDICTED: visual system homeobox 1 [Pan troglodytes]
Length = 218
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 162 RKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQ 209
>gi|7446283|pir||S39407 homeotic protein otx2 - human
Length = 225
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QL+ LEA F KT YPD+ +RE++ALK++L E RV+
Sbjct: 35 PRKQRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQ 83
>gi|47223503|emb|CAF97990.1| unnamed protein product [Tetraodon nigroviridis]
Length = 610
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV RE+LA+++DL E RV+
Sbjct: 267 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 314
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKE 86
+++RR+RT FT QLE+LE F+KTHYPDV L+ D +E
Sbjct: 219 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTSVCLSAGSDTEE 262
>gi|37788279|gb|AAP04271.1| homeodomain transcription factor ScOtx1 [Scyliorhinus canicula]
Length = 316
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QL+ LE+ F KT YPD+ +RE++ALK++L E RV+
Sbjct: 35 PRKQRRERTTFTRSQLDVLESLFAKTRYPDIFMREEVALKINLPESRVQ 83
>gi|52353979|gb|AAU44354.1| transcription factor VSX1 [Carassius auratus]
Length = 344
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/48 (58%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RKRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 149 RRKRRHRTVFTSHQLEELEKAFHEAHYPDVYAREMLAMKTELPEDRIQ 196
>gi|410054955|ref|XP_003953744.1| PREDICTED: visual system homeobox 1 [Pan troglodytes]
Length = 236
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 162 RKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQ 209
>gi|311271509|ref|XP_003133155.1| PREDICTED: LOW QUALITY PROTEIN: dorsal root ganglia homeobox
protein-like [Sus scrofa]
Length = 263
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 78
>gi|426391205|ref|XP_004061971.1| PREDICTED: visual system homeobox 1 isoform 4 [Gorilla gorilla
gorilla]
Length = 280
Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 162 RKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQ 209
>gi|354465789|ref|XP_003495359.1| PREDICTED: dorsal root ganglia homeobox protein-like [Cricetulus
griseus]
Length = 263
Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 78
>gi|149034141|gb|EDL88911.1| paired related homeobox protein-like 1, isoform CRA_a [Rattus
norvegicus]
Length = 253
Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 78
>gi|112820190|gb|ABI23976.1| visual system homeobox 1 transcript variant 4 [Homo sapiens]
Length = 218
Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 162 RKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQ 209
>gi|301783499|ref|XP_002927160.1| PREDICTED: dorsal root ganglia homeobox protein-like [Ailuropoda
melanoleuca]
Length = 263
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 78
>gi|242006780|ref|XP_002424223.1| Short stature homeobox protein, putative [Pediculus humanus
corporis]
gi|212507585|gb|EEB11485.1| Short stature homeobox protein, putative [Pediculus humanus
corporis]
Length = 152
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%)
Query: 15 PNLYPGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVL 74
PN+ T + + + + P +++RHRT FT QL +LE F KTHYPD+ +
Sbjct: 44 PNICDQSSTLSQQHSGQQSGNTSDSDKPTKQKRHRTRFTPAQLNELERCFSKTHYPDIFM 103
Query: 75 REQLALKVDLKEERVE 90
RE++A+++ L E RV+
Sbjct: 104 REEIAMRIGLTESRVQ 119
>gi|351714944|gb|EHB17863.1| Paired box protein Pax-6 [Heterocephalus glaber]
Length = 1055
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 43 KRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
KRK +R+RT FT+EQ+E LE FE+THYPDV RE+LA K+DL E R++
Sbjct: 840 KRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ 888
>gi|133778704|gb|AAI33878.1| Arx protein [Danio rerio]
Length = 382
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV RE+LA+++DL E RV+
Sbjct: 213 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 260
>gi|322800741|gb|EFZ21645.1| hypothetical protein SINV_12341 [Solenopsis invicta]
Length = 247
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 7/89 (7%)
Query: 3 IATGASMVAVAYPNLYPGYMTHAAATIAAMAASQHSAPPPKRK-RRHRTIFTEEQLEQLE 61
+ GA +V +P M + T+ + S KRK RR+RT F+ QLE+LE
Sbjct: 57 LIGGAQSTSVCFP------MKFSKCTMPPENEERSSCVIGKRKQRRYRTTFSNFQLEELE 110
Query: 62 ATFEKTHYPDVVLREQLALKVDLKEERVE 90
F+KTHYPDV RE+LA+++ L E RV+
Sbjct: 111 RAFQKTHYPDVFFREELAVRIQLTEARVQ 139
>gi|26342783|dbj|BAC35048.1| unnamed protein product [Mus musculus]
Length = 192
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 10/86 (11%)
Query: 15 PNLYPGYMT------HAAATIAAM---AASQHSAPPPKRK-RRHRTIFTEEQLEQLEATF 64
P+L PG + H ++ AA+ + H KRK RR RT FT QL++LE F
Sbjct: 58 PSLTPGSCSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKELERVF 117
Query: 65 EKTHYPDVVLREQLALKVDLKEERVE 90
+THYPD+ RE+LALK+DL E RV+
Sbjct: 118 AETHYPDIYTREELALKIDLTEARVQ 143
>gi|297491619|ref|XP_002699015.1| PREDICTED: dorsal root ganglia homeobox protein [Bos taurus]
gi|296472028|tpg|DAA14143.1| TPA: paired related homeobox protein-like 1-like [Bos taurus]
Length = 263
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 78
>gi|148677730|gb|EDL09677.1| retina and anterior neural fold homeobox, isoform CRA_b [Mus
musculus]
Length = 379
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 19 PGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQL 78
PG AA + ++ + PP K+ RR+RT FT QL +LE FEK+HYPDV RE+L
Sbjct: 150 PGLSVGPAAGDSKLSEEE---PPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREEL 206
Query: 79 ALKVDLKEERVE 90
A KV+L E RV+
Sbjct: 207 AGKVNLPEVRVQ 218
>gi|432861307|ref|XP_004069603.1| PREDICTED: homeobox protein aristaless-like 4-like [Oryzias
latipes]
Length = 367
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/47 (65%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 172 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 218
>gi|426391207|ref|XP_004061972.1| PREDICTED: visual system homeobox 1 isoform 5 [Gorilla gorilla
gorilla]
Length = 218
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 162 RKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQ 209
>gi|89274179|ref|NP_038861.2| retinal homeobox protein Rx [Mus musculus]
gi|341941993|sp|O35602.2|RX_MOUSE RecName: Full=Retinal homeobox protein Rx; AltName: Full=Retina and
anterior neural fold homeobox protein
gi|1932775|gb|AAC53129.1| paired-type homeobox gene [Mus musculus]
gi|19354403|gb|AAH24731.1| Retina and anterior neural fold homeobox [Mus musculus]
gi|37589415|gb|AAH58757.1| Retina and anterior neural fold homeobox [Mus musculus]
gi|148677729|gb|EDL09676.1| retina and anterior neural fold homeobox, isoform CRA_a [Mus
musculus]
Length = 342
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 19 PGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQL 78
PG AA + ++ + PP K+ RR+RT FT QL +LE FEK+HYPDV RE+L
Sbjct: 113 PGLSVGPAAGDSKLSEEE---PPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREEL 169
Query: 79 ALKVDLKEERVE 90
A KV+L E RV+
Sbjct: 170 AGKVNLPEVRVQ 181
>gi|357611334|gb|EHJ67427.1| hypothetical protein KGM_16069 [Danaus plexippus]
Length = 432
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE+LE F +THYPDV RE LALK++L E RV+
Sbjct: 152 RKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLALKINLTEARVQ 199
>gi|242024058|ref|XP_002432447.1| homeobox protein arx, putative [Pediculus humanus corporis]
gi|212517880|gb|EEB19709.1| homeobox protein arx, putative [Pediculus humanus corporis]
Length = 412
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 42 PKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PKRK RR+RT FT QLE+LE F +THYPDV RE+LA+K+ L E R++
Sbjct: 140 PKRKQRRYRTTFTSFQLEELEKAFARTHYPDVFTREELAMKIGLTEARIQ 189
>gi|449279931|gb|EMC87364.1| Dorsal root ganglia homeobox protein [Columba livia]
Length = 261
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 78
>gi|395501652|ref|XP_003755205.1| PREDICTED: dorsal root ganglia homeobox protein [Sarcophilus
harrisii]
Length = 260
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 78
>gi|284005045|ref|NP_001164685.1| aristaless homeodomain transcription factor [Saccoglossus
kowalevskii]
gi|283462198|gb|ADB22393.1| aristaless homeodomain transcription factor [Saccoglossus
kowalevskii]
Length = 256
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 40/56 (71%)
Query: 35 SQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
S S ++KRR+RT FT QL+++E F++THYPDV REQLAL+ DL E RV+
Sbjct: 95 SDTSDSSKRKKRRNRTTFTSFQLDEMEKVFQRTHYPDVYSREQLALRCDLTEARVQ 150
>gi|229915297|gb|ACQ90719.1| orthodenticle protein [Artemia sinica]
Length = 395
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 37 HSAPPPKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
H+ P RK RR RT FT QL+ LEA F KT YPD+ +RE++ALK++L E RV+
Sbjct: 95 HTGPNNSRKQRRERTTFTRGQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQ 149
>gi|198471041|ref|XP_002133645.1| GA23014 [Drosophila pseudoobscura pseudoobscura]
gi|198145739|gb|EDY72272.1| GA23014 [Drosophila pseudoobscura pseudoobscura]
Length = 684
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 38 SAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
S P P R RRHRT FT+EQL +LEA F K+HYPD+ RE+LA L E R++
Sbjct: 504 SCPTPAR-RRHRTTFTQEQLAELEAAFAKSHYPDIYCREELARTTKLNEARIQ 555
>gi|113120207|gb|ABI30251.1| Rx1 [Nematostella vectensis]
Length = 243
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT++QL++LE FEK HYPD+ LRE+LA K+++ E R++
Sbjct: 66 RKQRRNRTTFTKQQLQELEKVFEKKHYPDIALREELAAKINISEARIQ 113
>gi|194766533|ref|XP_001965379.1| GF20646 [Drosophila ananassae]
gi|190617989|gb|EDV33513.1| GF20646 [Drosophila ananassae]
Length = 405
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 42 PKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PKRK RR+RT FT QLE+LE F +THYPDV RE+LA+K+ L E R++
Sbjct: 78 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQ 127
>gi|91087879|ref|XP_969925.1| PREDICTED: similar to transcription factor protein [Tribolium
castaneum]
gi|270012765|gb|EFA09213.1| munster [Tribolium castaneum]
Length = 220
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT F+ QLE+LE F KTHYPDV RE+LAL++DL E RV+
Sbjct: 44 RKQRRYRTTFSNYQLEELERAFHKTHYPDVFFREELALRIDLTEARVQ 91
>gi|345485721|ref|XP_001606575.2| PREDICTED: hypothetical protein LOC100122965 [Nasonia vitripennis]
Length = 369
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/49 (53%), Positives = 37/49 (75%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P +++RHRT FT QL +LE F KTHYPD+ LRE++A+++ L E RV+
Sbjct: 67 PAKQKRHRTRFTPAQLNELERCFSKTHYPDIFLREEIAMRIGLTESRVQ 115
>gi|344258328|gb|EGW14432.1| Paired mesoderm homeobox protein 2B [Cricetulus griseus]
Length = 182
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 10/86 (11%)
Query: 15 PNLYPGYMT------HAAATIAAM---AASQHSAPPPKRK-RRHRTIFTEEQLEQLEATF 64
P+L PG + H ++ AA+ + H KRK RR RT FT QL++LE F
Sbjct: 58 PSLTPGSCSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKELERVF 117
Query: 65 EKTHYPDVVLREQLALKVDLKEERVE 90
+THYPD+ RE+LALK+DL E RV+
Sbjct: 118 AETHYPDIYTREELALKIDLTEARVQ 143
>gi|126272861|ref|XP_001366013.1| PREDICTED: dorsal root ganglia homeobox protein-like [Monodelphis
domestica]
Length = 260
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 78
>gi|47219885|emb|CAF97155.1| unnamed protein product [Tetraodon nigroviridis]
Length = 206
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 38/50 (76%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P K+ RR+RT FT QL +LE FEK+HYPDV RE+LALKV+L E RV+
Sbjct: 11 PKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQ 60
>gi|269784967|ref|NP_001161635.1| prophet of pit-like transcription factor [Saccoglossus kowalevskii]
gi|268054275|gb|ACY92624.1| prophet of pit-like transcription factor [Saccoglossus kowalevskii]
gi|268054379|gb|ACY92676.1| unc-42-like transcription factor [Saccoglossus kowalevskii]
Length = 262
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
Query: 23 THAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKV 82
TH+++ + AA+ + P P R RRHRT FT+EQL++LEA F K+HYPD+ RE+LA
Sbjct: 74 THSSSISGSSAAT--TCPTPAR-RRHRTTFTQEQLQELEAAFAKSHYPDIYCREELARVT 130
Query: 83 DLKEERVE 90
L E R++
Sbjct: 131 KLNEARIQ 138
>gi|372266239|ref|NP_001243200.1| visual system homeobox 1 isoform c [Homo sapiens]
gi|112820192|gb|ABI23977.1| visual system homeobox 1 transcript variant 5 [Homo sapiens]
Length = 236
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 162 RKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQ 209
>gi|345484335|ref|XP_001599456.2| PREDICTED: paired mesoderm homeobox protein 2-like [Nasonia
vitripennis]
Length = 250
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV RE+LAL++ L E RV+
Sbjct: 94 RKQRRYRTTFTNFQLEELERAFQKTHYPDVFFREELALRIQLTEARVQ 141
>gi|197359130|gb|ACH69781.1| paired box protein 6a [Anabarilius grahami]
Length = 284
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 43 KRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
KRK +R+RT FT+EQ+E LE FE+THYPDV RE+LA K+DL E R++
Sbjct: 78 KRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ 126
>gi|195479766|ref|XP_002101020.1| GE17381 [Drosophila yakuba]
gi|194188544|gb|EDX02128.1| GE17381 [Drosophila yakuba]
Length = 354
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 38 SAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
S P P R RRHRT FT+EQL +LEA F K+HYPD+ RE+LA L E R++
Sbjct: 174 SCPTPAR-RRHRTTFTQEQLAELEAAFAKSHYPDIYCREELARTTKLNEARIQ 225
>gi|32816237|gb|AAP88434.1| PaxB homeobox protein [Nematostella vectensis]
Length = 298
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 21 YMTHAAATIAAMAASQHSAPPPKRK---RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQ 77
Y +A + + + + P +R RR RT FT+EQ+E+LE FEKTHYPDV RE+
Sbjct: 191 YSVDSADSTGSHSGDEGDDPNSQRSKMSRRQRTNFTDEQIEKLEKVFEKTHYPDVFTREE 250
Query: 78 LALKVDLKEERVE 90
LA +V+L E R++
Sbjct: 251 LAQQVNLSEARIQ 263
>gi|2240024|gb|AAB62324.1| retinal homeobox protein [Mus musculus]
Length = 342
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 19 PGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQL 78
PG AA + ++ + PP K+ RR+RT FT QL +LE FEK+HYPDV RE+L
Sbjct: 113 PGLSVGPAAGDSKLSEEE---PPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREEL 169
Query: 79 ALKVDLKEERVE 90
A KV+L E RV+
Sbjct: 170 AGKVNLPEVRVQ 181
>gi|426391203|ref|XP_004061970.1| PREDICTED: visual system homeobox 1 isoform 3 [Gorilla gorilla
gorilla]
Length = 236
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 162 RKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQ 209
>gi|345314256|ref|XP_001516971.2| PREDICTED: hypothetical protein LOC100086929 [Ornithorhynchus
anatinus]
Length = 242
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+R RRHRTIF+EEQL+ LE F + YPDV+ RE LA ++ LKEERVE
Sbjct: 162 RRTRRHRTIFSEEQLQALETLFLQNPYPDVLTREHLASRIHLKEERVE 209
>gi|119619438|gb|EAW99032.1| aristaless related homeobox, isoform CRA_b [Homo sapiens]
Length = 258
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV RE+LA+++DL E RV+
Sbjct: 193 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 240
>gi|16901485|gb|AAL30160.1| Rx/rax homeoprotein [Mus musculus]
Length = 181
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 19 PGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQL 78
PG AA + ++ + PP K+ RR+RT FT QL +LE FEK+HYPDV RE+L
Sbjct: 113 PGLSVGPAAGDSKLSEEE---PPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREEL 169
Query: 79 ALKVDLKEERVE 90
A KV+L E RV+
Sbjct: 170 AGKVNLPEVRVQ 181
>gi|154147573|ref|NP_001093670.1| visual system homeobox 1 [Xenopus (Silurana) tropicalis]
gi|134254267|gb|AAI35614.1| vsx1 protein [Xenopus (Silurana) tropicalis]
Length = 344
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/53 (54%), Positives = 39/53 (73%)
Query: 38 SAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
S+ ++KRRHRT+FT QLE+LE F + HYPDV RE LALK +L E+R++
Sbjct: 143 SSQAKRKKRRHRTVFTAHQLEELEKAFNEAHYPDVYAREMLALKTELPEDRIQ 195
>gi|449273455|gb|EMC82949.1| Paired mesoderm homeobox protein 2B [Columba livia]
Length = 149
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 10/86 (11%)
Query: 15 PNLYPGYMT------HAAATIAAM---AASQHSAPPPKRK-RRHRTIFTEEQLEQLEATF 64
P+L PG + H ++ AA+ + H KRK RR RT FT QL++LE F
Sbjct: 58 PSLTPGSCSLGSLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKELERVF 117
Query: 65 EKTHYPDVVLREQLALKVDLKEERVE 90
+THYPD+ RE+LALK+DL E RV+
Sbjct: 118 AETHYPDIYTREELALKIDLTEARVQ 143
>gi|195575589|ref|XP_002077660.1| GD23036 [Drosophila simulans]
gi|194189669|gb|EDX03245.1| GD23036 [Drosophila simulans]
Length = 355
Score = 65.1 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT F QL++LE F++THYPDV RE+LA+++DL E RV+
Sbjct: 8 RKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQ 55
>gi|220897923|gb|ACL81241.1| orthodenticle homeobox 2 [Oryzias melastigma]
Length = 176
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QL+ LEA F KT YPD+ +RE++ALK++L E RV+
Sbjct: 30 PRKQRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQ 78
>gi|167234447|ref|NP_001107838.1| aristaless [Tribolium castaneum]
Length = 309
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 42 PKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PKRK RR+RT FT QLE+LE F +THYPDV RE+LA+K+ L E R++
Sbjct: 90 PKRKQRRYRTTFTSYQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQ 139
>gi|194853423|ref|XP_001968163.1| GG24714 [Drosophila erecta]
gi|190660030|gb|EDV57222.1| GG24714 [Drosophila erecta]
Length = 416
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 42 PKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PKRK RR+RT FT QLE+LE F +THYPDV RE+LA+K+ L E R++
Sbjct: 87 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQ 136
>gi|432904340|ref|XP_004077282.1| PREDICTED: homeobox protein OTX1 B-like [Oryzias latipes]
Length = 256
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QL+ LEA F KT YPD+ +RE++ALK++L E RV+
Sbjct: 35 PRKQRRERTTFTRSQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQ 83
>gi|350426573|ref|XP_003494478.1| PREDICTED: hypothetical protein LOC100744951 [Bombus impatiens]
Length = 391
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 38 SAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
S P P R RRHRT FT+EQL +LE+ F K+HYPD+ RE+LA L E R++
Sbjct: 211 SCPTPAR-RRHRTTFTQEQLAELESAFAKSHYPDIYCREELARSTKLNEARIQ 262
>gi|256071933|ref|XP_002572292.1| orthopedia homeobox protein [Schistosoma mansoni]
Length = 687
Score = 65.1 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 26/47 (55%), Positives = 36/47 (76%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RHRT FT QL +LE F KTHYPD+ +RE+LAL++ L E RV+
Sbjct: 354 KQKRHRTRFTPNQLNELERAFSKTHYPDIFMREELALRIGLTESRVQ 400
>gi|72044362|ref|XP_782307.1| PREDICTED: uncharacterized protein LOC576952 [Strongylocentrotus
purpuratus]
Length = 528
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 38/50 (76%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P K+ RR+RT FT QL +LE FEK+HYPDV RE+LALKV+L E RV+
Sbjct: 263 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQ 312
>gi|259013293|ref|NP_001158360.1| orthodenticle [Saccoglossus kowalevskii]
gi|32307793|gb|AAP79293.1| orthodenticle [Saccoglossus kowalevskii]
Length = 307
Score = 65.1 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
Query: 14 YPNLYPGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVV 73
+P +YPG + H A + H P+++RR RT FT QL+ LE+ F KT YPD+
Sbjct: 33 HPAMYPGTIIHGRAPLPL-----HYFCNPRKQRRERTTFTRAQLDILESLFGKTRYPDIF 87
Query: 74 LREQLALKVDLKEERVE 90
+RE++ALK++L E RV+
Sbjct: 88 MREEVALKINLPESRVQ 104
>gi|395752029|ref|XP_003779347.1| PREDICTED: visual system homeobox 1 isoform 3 [Pongo abelii]
Length = 236
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 162 RKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQ 209
>gi|16901484|gb|AAL30159.1| Rx/rax homeoprotein [Mus musculus]
Length = 172
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 19 PGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQL 78
PG AA + ++ + PP K+ RR+RT FT QL +LE FEK+HYPDV RE+L
Sbjct: 104 PGLSVGPAAGDSKLSEEE---PPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREEL 160
Query: 79 ALKVDLKEERVE 90
A KV+L E RV+
Sbjct: 161 AGKVNLPEVRVQ 172
>gi|18307889|gb|AAL67742.1|AF457141_1 Pax6 paired-less isoform [Mus musculus]
gi|18032022|gb|AAL40860.1| Pax6 paired-less isoform [Mus musculus]
gi|115501673|gb|ABI98884.1| paired box 6 transcript variant 39 [Columba livia]
gi|148695800|gb|EDL27747.1| paired box gene 6, isoform CRA_c [Mus musculus]
gi|149022828|gb|EDL79722.1| paired box gene 6, isoform CRA_b [Rattus norvegicus]
Length = 221
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 43 KRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
KRK +R+RT FT+EQ+E LE FE+THYPDV RE+LA K+DL E R++
Sbjct: 6 KRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ 54
>gi|328719289|ref|XP_003246719.1| PREDICTED: hypothetical protein LOC100569588 [Acyrthosiphon pisum]
Length = 172
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 38/52 (73%)
Query: 39 APPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
A P +++RHRT FT QL +LE F KTHYPD+ +RE++A+++ L E RV+
Sbjct: 120 AGKPNKQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQ 171
>gi|221307806|gb|ACM16761.1| RH73981p [Drosophila melanogaster]
Length = 358
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 38 SAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
S P P R RRHRT FT+EQL +LEA F K+HYPD+ RE+LA L E R++
Sbjct: 174 SCPTPAR-RRHRTTFTQEQLAELEAAFAKSHYPDIYCREELARTTKLNEARIQ 225
>gi|344268964|ref|XP_003406326.1| PREDICTED: retinal homeobox protein Rx-like [Loxodonta africana]
Length = 341
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 19 PGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQL 78
PG A A +A + PP K+ RR+RT FT QL +LE FEK+HYPDV RE+L
Sbjct: 109 PGLRVGPANGDAKLAEEE---PPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREEL 165
Query: 79 ALKVDLKEERVE 90
A KV+L E RV+
Sbjct: 166 AGKVNLPEVRVQ 177
>gi|444706976|gb|ELW48288.1| Homeobox protein ARX [Tupaia chinensis]
Length = 147
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV RE+LA+++DL E RV+
Sbjct: 76 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 123
>gi|219518636|gb|AAI71926.1| Prrxl1 protein [Mus musculus]
Length = 180
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 78
>gi|380022576|ref|XP_003695117.1| PREDICTED: uncharacterized protein LOC100867696 [Apis florea]
Length = 418
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 38 SAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
S P P R RRHRT FT+EQL +LE+ F K+HYPD+ RE+LA L E R++
Sbjct: 238 SCPTPAR-RRHRTTFTQEQLAELESAFAKSHYPDIYCREELARSTKLNEARIQ 289
>gi|357621094|gb|EHJ73052.1| hypothetical protein KGM_05078 [Danaus plexippus]
Length = 165
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 49/88 (55%), Gaps = 12/88 (13%)
Query: 3 IATGASMVAVAYPNLYPGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEA 62
+ G S ++ P+L P + H T S P P R RRHRT FT+EQL +LEA
Sbjct: 25 VTGGTSALS---PSLGPQHAGHTPTTA--------SCPTPAR-RRHRTTFTQEQLAELEA 72
Query: 63 TFEKTHYPDVVLREQLALKVDLKEERVE 90
F K+HYPD+ RE+LA L E R++
Sbjct: 73 AFAKSHYPDIYCREELARTTKLNEARIQ 100
>gi|242008553|ref|XP_002425067.1| homeobox protein arx, putative [Pediculus humanus corporis]
gi|212508732|gb|EEB12329.1| homeobox protein arx, putative [Pediculus humanus corporis]
Length = 181
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 43/61 (70%)
Query: 30 AAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERV 89
++ + ++ +++RR+RT F+ QL++LE F +THYPDV RE+LAL++DL E RV
Sbjct: 72 GNLSRNSRTSGIKRKQRRYRTTFSNYQLDELERAFRETHYPDVFFREELALRIDLTEARV 131
Query: 90 E 90
+
Sbjct: 132 Q 132
>gi|320544499|ref|NP_001097075.2| CG34340 [Drosophila melanogaster]
gi|116875717|gb|ABK30908.1| IP09201p [Drosophila melanogaster]
gi|318068302|gb|ABV53614.2| CG34340 [Drosophila melanogaster]
Length = 587
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE+LE F +THYPDV RE LA+K++L E RV+
Sbjct: 50 RKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQ 97
>gi|3115326|emb|CAA04396.1| Otx2 [Oryzias latipes]
Length = 181
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QL+ LEA F KT YPD+ +RE++ALK++L E RV+
Sbjct: 35 PRKQRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQ 83
>gi|395542879|ref|XP_003773352.1| PREDICTED: paired mesoderm homeobox protein 2B [Sarcophilus
harrisii]
Length = 265
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 10/86 (11%)
Query: 15 PNLYPGYMT------HAAATIAAM---AASQHSAPPPKRK-RRHRTIFTEEQLEQLEATF 64
P+L PG + H ++ AA+ + H KRK RR RT FT QL++LE F
Sbjct: 58 PSLTPGSCSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKELERVF 117
Query: 65 EKTHYPDVVLREQLALKVDLKEERVE 90
+THYPD+ RE+LALK+DL E RV+
Sbjct: 118 AETHYPDIYTREELALKIDLTEARVQ 143
>gi|410908185|ref|XP_003967571.1| PREDICTED: homeobox protein aristaless-like 4-like [Takifugu
rubripes]
Length = 365
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/47 (65%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 170 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 216
>gi|449671313|ref|XP_002164410.2| PREDICTED: homeobox protein orthopedia-like, partial [Hydra
magnipapillata]
Length = 230
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 38/47 (80%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RHRT FT+ QL +LE F KTHYPD+ +RE+LA+++DL E RV+
Sbjct: 24 KQKRHRTRFTQTQLNELERYFNKTHYPDIFVREELAMRIDLTESRVQ 70
>gi|47228761|emb|CAG07493.1| unnamed protein product [Tetraodon nigroviridis]
Length = 225
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT F+ QLE+LE F+KTHYPDV REQLAL+ +L E RV+
Sbjct: 11 NKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTELTEARVQ 58
>gi|340709231|ref|XP_003393215.1| PREDICTED: homeobox protein aristaless-like [Bombus terrestris]
Length = 280
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 42 PKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PKRK RR+RT FT QLE+LE F +THYPDV RE+LA+K+ L E R++
Sbjct: 35 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQ 84
>gi|3021452|emb|CAA75669.1| prdl-b protein [Hydra vulgaris]
Length = 228
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 40/55 (72%)
Query: 36 QHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
Q + P +KRR+RT FT QL++LE F +THYPD+ LRE++A+K+ L E R++
Sbjct: 138 QQALSMPSKKRRYRTTFTTHQLDELERVFNRTHYPDIFLREEMAVKLGLTEARIQ 192
>gi|326921214|ref|XP_003206857.1| PREDICTED: exocyst complex component 5-like, partial [Meleagris
gallopavo]
Length = 763
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/54 (51%), Positives = 39/54 (72%)
Query: 37 HSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
H P+++RR RT FT QL+ LEA F KT YPD+ +RE++ALK++L E RV+
Sbjct: 710 HLKATPRKQRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQ 763
>gi|45383792|ref|NP_989493.1| homeobox protein aristaless-like 4 [Gallus gallus]
gi|3661601|gb|AAC61772.1| paired type homeodomain protein [Gallus gallus]
Length = 387
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 191 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 237
>gi|115501675|gb|ABI98885.1| paired box 6 transcript variant 40 [Columba livia]
Length = 215
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 43 KRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
KRK +R+RT FT+EQ+E LE FE+THYPDV RE+LA K+DL E R++
Sbjct: 6 KRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ 54
>gi|157817853|ref|NP_001103016.1| visual system homeobox 1 [Rattus norvegicus]
gi|149031121|gb|EDL86148.1| rCG37439 [Rattus norvegicus]
Length = 369
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 166 RKKRRHRTVFTAHQLEELEKAFGEAHYPDVYAREMLAVKTELPEDRIQ 213
>gi|1352719|sp|P47237.1|PAX6_CHICK RecName: Full=Paired box protein Pax-6
gi|545839|gb|AAB30163.1| transcription factor [Gallus gallus]
Length = 216
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 43 KRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
KRK +R+RT FT+EQ+E LE FE+THYPDV RE+LA K+DL E R++
Sbjct: 7 KRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ 55
>gi|410899545|ref|XP_003963257.1| PREDICTED: homeobox protein aristaless-like 3-like [Takifugu
rubripes]
Length = 359
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT F+ QLE+LE F+KTHYPDV REQLAL+ +L E RV+
Sbjct: 156 NKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTELTEARVQ 203
>gi|33637779|gb|AAQ24027.1| homeobox protein Otx [Holopneustes purpurascens]
Length = 345
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PP+++RR RT FT QL+ LE F +T YPD+ +RE++A+K++L E RV+
Sbjct: 122 PPRKQRRERTTFTRAQLDVLETLFSRTRYPDIFMREEVAMKINLPESRVQ 171
>gi|19168460|dbj|BAB85815.1| aristaless protein [Gryllus bimaculatus]
Length = 391
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 42 PKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PKRK RR+RT FT QLE+LE F +THYPDV RE+LA+K+ L E R++
Sbjct: 96 PKRKQRRYRTTFTSFQLEELEKAFTRTHYPDVFTREELAIKIGLTEARIQ 145
>gi|281485128|gb|ADA70354.1| paired-like family homeodomain transcription factor [Junonia
coenia]
Length = 264
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 42 PKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PKRK RR+RT FT QLE+LE F +THYPDV RE+LA+K+ L E R++
Sbjct: 43 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQ 92
>gi|37748754|gb|AAH59574.1| Vsx1 protein [Danio rerio]
Length = 340
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 149 RKKRRHRTVFTSHQLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQ 196
>gi|195350151|ref|XP_002041605.1| GM16755 [Drosophila sechellia]
gi|194123378|gb|EDW45421.1| GM16755 [Drosophila sechellia]
Length = 348
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT F QL++LE F++THYPDV RE+LA+++DL E RV+
Sbjct: 3 RKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQ 50
>gi|3024326|sp|Q26417.1|OTX_STRPU RecName: Full=Homeobox protein OTX; Short=SpOTX; AltName:
Full=Orthodenticle homolog
gi|913001|gb|AAB33568.1| orthodenticle-related protein [Strongylocentrotus purpuratus]
Length = 371
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PP+++RR RT FT QL+ LE F +T YPD+ +RE++A+K++L E RV+
Sbjct: 127 PPRKQRRERTTFTRAQLDVLETLFSRTRYPDIFMREEVAMKINLPESRVQ 176
>gi|354505900|ref|XP_003515005.1| PREDICTED: paired mesoderm homeobox protein 2B-like, partial
[Cricetulus griseus]
Length = 148
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 10/86 (11%)
Query: 15 PNLYPGYMT------HAAATIAAM---AASQHSAPPPKRK-RRHRTIFTEEQLEQLEATF 64
P+L PG + H ++ AA+ + H KRK RR RT FT QL++LE F
Sbjct: 58 PSLTPGSCSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKELERVF 117
Query: 65 EKTHYPDVVLREQLALKVDLKEERVE 90
+THYPD+ RE+LALK+DL E RV+
Sbjct: 118 AETHYPDIYTREELALKIDLTEARVQ 143
>gi|156151437|ref|NP_999753.2| homeobox protein OTX isoform alpha [Strongylocentrotus purpuratus]
Length = 371
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PP+++RR RT FT QL+ LE F +T YPD+ +RE++A+K++L E RV+
Sbjct: 127 PPRKQRRERTTFTRAQLDVLETLFSRTRYPDIFMREEVAMKINLPESRVQ 176
>gi|402883436|ref|XP_003905224.1| PREDICTED: visual system homeobox 1 isoform 2 [Papio anubis]
Length = 280
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 162 RKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQ 209
>gi|221119371|ref|XP_002160816.1| PREDICTED: homeobox protein aristaless-like isoform 1 [Hydra
magnipapillata]
Length = 239
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT+ QL++LE F+KTHYPDV +RE+LA++V L E RV+
Sbjct: 48 RKQRRYRTTFTQFQLDELERAFDKTHYPDVFMREELAVRVHLTEARVQ 95
>gi|348535330|ref|XP_003455154.1| PREDICTED: homeobox protein orthopedia B-like isoform 2
[Oreochromis niloticus]
Length = 338
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/49 (55%), Positives = 39/49 (79%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P++++RHRT FT QL +LE +F KTHYPD+ +RE+LAL++ L E RV+
Sbjct: 117 PQKQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQ 165
>gi|345491839|ref|XP_001607712.2| PREDICTED: aristaless-related homeobox protein-like [Nasonia
vitripennis]
Length = 421
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 42 PKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PKRK RR+RT FT QLE+LE F +THYPDV RE+LA+K+ L E R++
Sbjct: 159 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQ 208
>gi|219660952|gb|ACL30968.1| visual system homeobox [Carassius auratus]
gi|229424351|gb|ACQ63564.1| transcription factor VSX1 [Carassius auratus]
Length = 344
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 149 RKKRRHRTVFTSHQLEELEKAFHEAHYPDVYAREMLAMKTELPEDRIQ 196
>gi|3176391|dbj|BAA28675.1| orthodenticle-related protein [Hemicentrotus pulcherrimus]
Length = 371
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PP+++RR RT FT QL+ LE F +T YPD+ +RE++A+K++L E RV+
Sbjct: 127 PPRKQRRERTTFTRAQLDVLETLFSRTRYPDIFMREEVAMKINLPESRVQ 176
>gi|307169524|gb|EFN62166.1| Homeobox protein prophet of Pit-1 [Camponotus floridanus]
Length = 313
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 38 SAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
S P P R RRHRT FT+EQL +LE+ F K+HYPD+ RE+LA L E R++
Sbjct: 133 SCPTPAR-RRHRTTFTQEQLAELESAFAKSHYPDIYCREELARTTKLNEARIQ 184
>gi|3204110|emb|CAA11364.1| Pax6 [Branchiostoma floridae]
Length = 483
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 43 KRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
KRK +R+RT FT+EQ+E LE FE+THYPDV RE+LA K+DL E R++
Sbjct: 247 KRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ 295
>gi|47209983|emb|CAF94204.1| unnamed protein product [Tetraodon nigroviridis]
Length = 296
Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR RT FT QL++LE F +THYPD+ RE+LALK+DL E RV+
Sbjct: 87 RKQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 134
>gi|355784763|gb|EHH65614.1| Transcription factor VSX1, partial [Macaca fascicularis]
Length = 228
Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 25 RKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQ 72
>gi|324521338|gb|ADY47835.1| Homeobox protein OTX1 [Ascaris suum]
Length = 279
Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Query: 5 TGASMVAVAYP--NLYPGYMTHAAATIA----AMAASQHSAPPPKRKRRHRTIFTEEQLE 58
+GA++ A P N P M + ++A A A+ ++ +++RR RT FT QLE
Sbjct: 43 SGAALGFAAPPAHNFLPAGMGYIGGSLADCQSAGMAAWNAGQVSRKQRRERTTFTRIQLE 102
Query: 59 QLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
LE F KT YPD+ +RE+++LK+ L E RV+
Sbjct: 103 VLEGYFSKTRYPDIFIREEISLKIQLPESRVQ 134
>gi|242010483|ref|XP_002425997.1| Ptx1 homeodomain protein, putative [Pediculus humanus corporis]
gi|212509988|gb|EEB13259.1| Ptx1 homeodomain protein, putative [Pediculus humanus corporis]
Length = 480
Score = 64.7 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Query: 19 PGYMTHAAATIAAMAA----SQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVL 74
PG ++ A+ A + S P P R RRHRT FT+EQL +LEA F K+HYPD+
Sbjct: 279 PGLTVSSSPVTTAIHAGHTPTTASCPTPAR-RRHRTTFTQEQLAELEAAFAKSHYPDIYC 337
Query: 75 REQLALKVDLKEERVE 90
RE+LA L E R++
Sbjct: 338 REELARTTKLNEARIQ 353
>gi|260796221|ref|XP_002593103.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
gi|229278327|gb|EEN49114.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
Length = 383
Score = 64.7 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 29/48 (60%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F KTHYPDV RE+LA++VDL E RV+
Sbjct: 177 RKQRRYRTTFTSYQLEELERAFAKTHYPDVFTREELAMRVDLTEARVQ 224
>gi|380018965|ref|XP_003693389.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Apis florea]
Length = 187
Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 33 AASQHSAPPPKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
A S H KRK RR RT FT QL++LE F++THYPD+ RE++A+K+DL E RV+
Sbjct: 125 AYSGHDGLAEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 183
>gi|358337749|dbj|GAA56083.1| homeobox protein aristaless-like 4 [Clonorchis sinensis]
Length = 529
Score = 64.7 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/72 (47%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 19 PGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQL 78
P YMTH + +I Q+ +KRR+RT FT QL ++E F+KTHYPDV REQL
Sbjct: 108 PTYMTHDSGSIPD--EQQNCDRDKLKKRRNRTTFTSFQLNEMERIFQKTHYPDVYAREQL 165
Query: 79 ALKVDLKEERVE 90
A++ L E RV+
Sbjct: 166 AMRTGLTEARVQ 177
>gi|221119369|ref|XP_002160848.1| PREDICTED: homeobox protein aristaless-like isoform 2 [Hydra
magnipapillata]
Length = 210
Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT+ QL++LE F+KTHYPDV +RE+LA++V L E RV+
Sbjct: 19 RKQRRYRTTFTQFQLDELERAFDKTHYPDVFMREELAVRVHLTEARVQ 66
>gi|1684800|gb|AAB36534.1| paired box homeodomain protein TPAX6, partial [Mesotriton
alpestris]
Length = 233
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 43 KRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
KRK +R+RT FT+EQ+E LE FE+THYPDV RE+LA K+DL E R++
Sbjct: 65 KRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ 113
>gi|355563427|gb|EHH19989.1| Transcription factor VSX1, partial [Macaca mulatta]
Length = 246
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 43 RKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQ 90
>gi|332027511|gb|EGI67588.1| Paired mesoderm homeobox protein 2B [Acromyrmex echinatior]
Length = 212
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 33 AASQHSAPPPKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
A S H KRK RR RT FT QL++LE F++THYPD+ RE++A+K+DL E RV+
Sbjct: 127 AYSGHDGLAEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 185
>gi|328792935|ref|XP_003251804.1| PREDICTED: hypothetical protein LOC726538 [Apis mellifera]
Length = 377
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 38 SAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
S P P R RRHRT FT+EQL +LE+ F K+HYPD+ RE+LA L E R++
Sbjct: 197 SCPTPAR-RRHRTTFTQEQLAELESAFAKSHYPDIYCREELARSTKLNEARIQ 248
>gi|58396717|gb|AAW72798.1| aristaless-related homeobox protein Arx [Perionyx excavatus]
Length = 53
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 37/46 (80%)
Query: 45 KRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
KRR+RT FT QLE+LE F+KTHYPDV +REQLA++ +L E R++
Sbjct: 1 KRRNRTTFTSYQLEELEKVFQKTHYPDVYIREQLAMRCNLTEARIQ 46
>gi|49169835|ref|NP_001001796.1| dorsal root ganglia homeobox protein [Mus musculus]
gi|26333375|dbj|BAC30405.1| unnamed protein product [Mus musculus]
gi|124376814|gb|AAI32614.1| Paired related homeobox protein-like 1 [Mus musculus]
gi|148877678|gb|AAI45918.1| Paired related homeobox protein-like 1 [Mus musculus]
gi|188036461|gb|ACD45985.1| paired related homeobox protein-like 1b [Mus musculus]
Length = 220
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 78
>gi|322366557|gb|ADW95352.1| Otx beta [Paracentrotus lividus]
Length = 297
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PP+++RR RT FT QL+ LE F +T YPD +RE++A+K++L E RV+
Sbjct: 51 PPRKQRRERTTFTRAQLDVLETLFSRTRYPDTFMREEVAMKINLPESRVQ 100
>gi|307205017|gb|EFN83540.1| Paired mesoderm homeobox protein 2B [Harpegnathos saltator]
Length = 223
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 33 AASQHSAPPPKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
A S H KRK RR RT FT QL++LE F++THYPD+ RE++A+K+DL E RV+
Sbjct: 132 AYSGHDGLAEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 190
>gi|194209207|ref|XP_001917289.1| PREDICTED: LOW QUALITY PROTEIN: paired mesoderm homeobox protein
2B-like [Equus caballus]
Length = 315
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 10/86 (11%)
Query: 15 PNLYPGYMT------HAAATIAAM---AASQHSAPPPKRK-RRHRTIFTEEQLEQLEATF 64
P+L PG + H ++ AA+ + H KRK RR RT FT QL++LE F
Sbjct: 58 PSLTPGSCSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKELERVF 117
Query: 65 EKTHYPDVVLREQLALKVDLKEERVE 90
+THYPD+ RE+LALK+DL E RV+
Sbjct: 118 AETHYPDIYTREELALKIDLTEARVQ 143
>gi|350418342|ref|XP_003491830.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Bombus
impatiens]
Length = 200
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 33 AASQHSAPPPKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
A S H KRK RR RT FT QL++LE F++THYPD+ RE++A+K+DL E RV+
Sbjct: 125 AYSGHDGLAEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 183
>gi|195148028|ref|XP_002014976.1| GL18665 [Drosophila persimilis]
gi|194106929|gb|EDW28972.1| GL18665 [Drosophila persimilis]
Length = 370
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE+LE F +THYPDV RE LA+K++L E RV+
Sbjct: 50 RKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQ 97
>gi|340723881|ref|XP_003400315.1| PREDICTED: hypothetical protein LOC100649943 [Bombus terrestris]
Length = 460
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 38 SAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
S P P R RRHRT FT+EQL +LE+ F K+HYPD+ RE+LA L E R++
Sbjct: 280 SCPTPAR-RRHRTTFTQEQLAELESAFAKSHYPDIYCREELARSTKLNEARIQ 331
>gi|256017083|dbj|BAH97320.1| aristaless-like homeobox protein [Hemicentrotus pulcherrimus]
Length = 381
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 29/48 (60%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRR+RT FT QLE++E F++THYPDV REQLAL+ DL E RV+
Sbjct: 95 RKKRRNRTTFTSYQLEEMEKVFQRTHYPDVYCREQLALRCDLTEARVQ 142
>gi|108735476|gb|ABG00197.1| Alx1 [Paracentrotus lividus]
Length = 519
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 29/48 (60%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRR+RT FT QLE++E F++THYPDV REQLAL+ DL E RV+
Sbjct: 198 RKKRRNRTTFTSYQLEEMEKVFQRTHYPDVYCREQLALRCDLTEARVQ 245
>gi|157110013|ref|XP_001650918.1| hypothetical protein AaeL_AAEL015197 [Aedes aegypti]
gi|108868397|gb|EAT32622.1| AAEL015197-PA, partial [Aedes aegypti]
Length = 74
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 40/48 (83%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+R+RR+RT FT +QL++LE F+KTHYPDV LRE++AL++ L E RV+
Sbjct: 1 RRQRRNRTTFTPQQLQELETLFQKTHYPDVFLREEVALRISLSEARVQ 48
>gi|18859553|ref|NP_571408.1| visual system homeobox 1 [Danio rerio]
gi|25009566|sp|O42250.2|VSX1_DANRE RecName: Full=Visual system homeobox 1; AltName: Full=Transcription
factor VSX1
gi|7159413|gb|AAB71611.2| paired-like homeobox protein [Danio rerio]
Length = 344
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 149 RKKRRHRTVFTSHQLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQ 196
>gi|224049967|ref|XP_002188708.1| PREDICTED: paired mesoderm homeobox protein 2B [Taeniopygia
guttata]
Length = 187
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 10/86 (11%)
Query: 15 PNLYPGYMT------HAAATIAAM---AASQHSAPPPKRK-RRHRTIFTEEQLEQLEATF 64
P+L PG + H ++ AA+ + H KRK RR RT FT QL++LE F
Sbjct: 58 PSLTPGSCSLGSLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKELERVF 117
Query: 65 EKTHYPDVVLREQLALKVDLKEERVE 90
+THYPD+ RE+LALK+DL E RV+
Sbjct: 118 AETHYPDIYTREELALKIDLTEARVQ 143
>gi|432112496|gb|ELK35234.1| Dorsal root ganglia homeobox protein [Myotis davidii]
Length = 180
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 73 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 120
>gi|410954493|ref|XP_003983899.1| PREDICTED: visual system homeobox 1 [Felis catus]
Length = 364
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 162 RKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQ 209
>gi|383850991|ref|XP_003701047.1| PREDICTED: uncharacterized protein LOC100880559 [Megachile
rotundata]
Length = 431
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 38 SAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
S P P R RRHRT FT+EQL +LE+ F K+HYPD+ RE+LA L E R++
Sbjct: 251 SCPTPAR-RRHRTTFTQEQLAELESAFAKSHYPDIYCREELARSTKLNEARIQ 302
>gi|356582262|ref|NP_001239128.1| paired-like homeobox 2a [Xenopus (Silurana) tropicalis]
Length = 281
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR RT FT QL++LE F +THYPD+ RE+LALK+DL E RV+
Sbjct: 90 RKQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 137
>gi|406719564|dbj|BAM45081.1| dorsal root ganglia homeobox, partial [Gallus gallus]
Length = 156
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 23 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 70
>gi|3204118|emb|CAA11368.1| Pax6 [Branchiostoma floridae]
Length = 463
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 43 KRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
KRK +R+RT FT+EQ+E LE FE+THYPDV RE+LA K+DL E R++
Sbjct: 224 KRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ 272
>gi|440891870|gb|ELR45335.1| Paired mesoderm homeobox protein 2B, partial [Bos grunniens mutus]
Length = 212
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 10/86 (11%)
Query: 15 PNLYPGYMT------HAAATIAAM---AASQHSAPPPKRK-RRHRTIFTEEQLEQLEATF 64
P+L PG + H ++ AA+ + H KRK RR RT FT QL++LE F
Sbjct: 58 PSLTPGSCSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKELERVF 117
Query: 65 EKTHYPDVVLREQLALKVDLKEERVE 90
+THYPD+ RE+LALK+DL E RV+
Sbjct: 118 AETHYPDIYTREELALKIDLTEARVQ 143
>gi|291385705|ref|XP_002709324.1| PREDICTED: paired-like homeobox 2b [Oryctolagus cuniculus]
Length = 250
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 13/100 (13%)
Query: 1 MRIATGASMVAVAYPNLYPGYMT------HAAATIAAM---AASQHSAPPPKRK-RRHRT 50
+R GA+ P+L PG + H ++ AA+ + H KRK RR RT
Sbjct: 47 IRTTFGAT---SGCPSLTPGSCSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRT 103
Query: 51 IFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
FT QL++LE F +THYPD+ RE+LALK+DL E RV+
Sbjct: 104 TFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 143
>gi|157114702|ref|XP_001652379.1| homeobox protein [Aedes aegypti]
gi|108883532|gb|EAT47757.1| AAEL001148-PA [Aedes aegypti]
Length = 236
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 38 SAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
S P P R RRHRT FT+EQL +LEA F K+HYPD+ RE+LA L E R++
Sbjct: 56 SCPTPAR-RRHRTTFTQEQLAELEAAFAKSHYPDIYCREELARTTKLNEARIQ 107
>gi|344250771|gb|EGW06875.1| Visual system homeobox 1 [Cricetulus griseus]
Length = 226
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 38/51 (74%)
Query: 40 PPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P ++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 19 PGKRKKRRHRTVFTAHQLEELEKAFGEAHYPDVYAREMLAVKTELPEDRIQ 69
>gi|322797345|gb|EFZ19457.1| hypothetical protein SINV_02900 [Solenopsis invicta]
Length = 185
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 33 AASQHSAPPPKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
A S H KRK RR RT FT QL++LE F++THYPD+ RE++A+K+DL E RV+
Sbjct: 127 AYSGHDGLAEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 185
>gi|85719151|dbj|BAE78538.1| aristaless [Harmonia axyridis]
Length = 314
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 42 PKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PKRK RR+RT FT QLE+LE F +THYPDV RE+LA+K+ L E R++
Sbjct: 92 PKRKQRRYRTTFTSYQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQ 141
>gi|328792237|ref|XP_624630.3| PREDICTED: homeobox protein aristaless-like isoform 2 [Apis
mellifera]
Length = 259
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 42 PKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PKRK RR+RT FT QLE+LE F +THYPDV RE+LA+K+ L E R++
Sbjct: 35 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQ 84
>gi|225355244|gb|ACN88554.1| paired box protein 3b [Danio rerio]
Length = 286
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 35 SQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
S+ PP +++RR RT FT +QLE+LE FE+THYPD+ RE+LA + L E RV+
Sbjct: 212 SEPDLPPKRKQRRSRTTFTADQLEELERAFERTHYPDIYTREELAQRAKLTEARVQ 267
>gi|18203379|sp|Q9PVX0.1|RX2_CHICK RecName: Full=Retinal homeobox protein Rx2; Short=cRax2
gi|6002395|dbj|BAA84749.1| homeobox protein cRax/Rax2/Rx2 [Gallus gallus]
Length = 317
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P K+ RR+RT FT QL +LE FEK+HYPDV RE+LA+KV+L E RV+
Sbjct: 118 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQ 167
>gi|194667831|ref|XP_001252231.2| PREDICTED: paired mesoderm homeobox protein 2B [Bos taurus]
Length = 314
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 10/86 (11%)
Query: 15 PNLYPGYMT------HAAATIAAM---AASQHSAPPPKRK-RRHRTIFTEEQLEQLEATF 64
P+L PG + H ++ AA+ + H KRK RR RT FT QL++LE F
Sbjct: 58 PSLTPGSCSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKELERVF 117
Query: 65 EKTHYPDVVLREQLALKVDLKEERVE 90
+THYPD+ RE+LALK+DL E RV+
Sbjct: 118 AETHYPDIYTREELALKIDLTEARVQ 143
>gi|332022279|gb|EGI62592.1| Homeobox protein prophet of Pit-1 [Acromyrmex echinatior]
Length = 281
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 38 SAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
S P P R RRHRT FT+EQL +LE+ F K+HYPD+ RE+LA L E R++
Sbjct: 101 SCPTPAR-RRHRTTFTQEQLAELESAFAKSHYPDIYCREELARTTKLNEARIQ 152
>gi|56785872|gb|AAW29068.1| homeodomain transcription factor PaxC [Nematostella vectensis]
Length = 458
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 26 AATIAAMAASQHSAPPPKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDL 84
A+T + A KRK RR+RT FT +QLE LE FEK+HYPDV RE+LA K+D+
Sbjct: 300 ASTDDERGKDEDPATNQKRKLRRNRTTFTPDQLEMLEKEFEKSHYPDVATREELANKIDM 359
Query: 85 KEERVE 90
E RV+
Sbjct: 360 SEARVQ 365
>gi|344030214|ref|NP_001230653.1| retinal homeobox protein Rx2 [Gallus gallus]
gi|23451258|gb|AAN32718.1|AF420600_1 homeobox transcription factor RAX1 [Gallus gallus]
Length = 317
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P K+ RR+RT FT QL +LE FEK+HYPDV RE+LA+KV+L E RV+
Sbjct: 118 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQ 167
>gi|348535328|ref|XP_003455153.1| PREDICTED: homeobox protein orthopedia B-like isoform 1
[Oreochromis niloticus]
Length = 325
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 27/49 (55%), Positives = 39/49 (79%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P++++RHRT FT QL +LE +F KTHYPD+ +RE+LAL++ L E RV+
Sbjct: 104 PQKQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQ 152
>gi|297708248|ref|XP_002830886.1| PREDICTED: homeobox protein goosecoid-2 [Pongo abelii]
Length = 205
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 36/48 (75%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+R RRHRTIF E+QL+ LE F + YPDV RE+LA ++ L+EERVE
Sbjct: 124 RRTRRHRTIFNEDQLQALEELFVQNQYPDVSTRERLAGRIRLREERVE 171
>gi|91080409|ref|XP_967582.1| PREDICTED: similar to CG33980 CG33980-PA [Tribolium castaneum]
Length = 403
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 34/45 (75%)
Query: 46 RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
RRHRTIFT QLE+LE F+ HYPDV RE L+LK DL E+R++
Sbjct: 163 RRHRTIFTSYQLEELEKAFKDAHYPDVYAREMLSLKTDLPEDRIQ 207
>gi|403300665|ref|XP_003941040.1| PREDICTED: paired mesoderm homeobox protein 2B [Saimiri boliviensis
boliviensis]
Length = 242
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 10/86 (11%)
Query: 15 PNLYPGYMT------HAAATIAAM---AASQHSAPPPKRK-RRHRTIFTEEQLEQLEATF 64
P+L PG + H ++ AA+ + H KRK RR RT FT QL++LE F
Sbjct: 58 PSLTPGSCSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKELERVF 117
Query: 65 EKTHYPDVVLREQLALKVDLKEERVE 90
+THYPD+ RE+LALK+DL E RV+
Sbjct: 118 AETHYPDIYTREELALKIDLTEARVQ 143
>gi|117650666|gb|ABK54278.1| Pax6 [Branchiostoma belcheri]
Length = 461
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 43 KRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
KRK +R+RT FT+EQ+E LE FE+THYPDV RE+LA K+DL E R++
Sbjct: 225 KRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ 273
>gi|383865116|ref|XP_003708021.1| PREDICTED: homeobox protein aristaless-like [Megachile rotundata]
Length = 261
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 42 PKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PKRK RR+RT FT QLE+LE F +THYPDV RE+LA+K+ L E R++
Sbjct: 36 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQ 85
>gi|345327987|ref|XP_001508209.2| PREDICTED: dorsal root ganglia homeobox protein-like, partial
[Ornithorhynchus anatinus]
Length = 173
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 78
>gi|345317707|ref|XP_001510573.2| PREDICTED: homeobox protein ARX-like, partial [Ornithorhynchus
anatinus]
Length = 159
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 29 IAAMAASQHSAPPPKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEE 87
I A S KRK RR+RT FT QLE+LE F+KTHYPDV RE+LA+++DL E
Sbjct: 97 ICLSAGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEA 156
Query: 88 RVE 90
RV+
Sbjct: 157 RVQ 159
>gi|335304550|ref|XP_003359967.1| PREDICTED: visual system homeobox 1-like [Sus scrofa]
Length = 364
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 28/51 (54%), Positives = 38/51 (74%)
Query: 40 PPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P ++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 159 PGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQ 209
>gi|116007730|ref|NP_001036563.1| orthopedia, isoform C [Drosophila melanogaster]
gi|77403885|gb|ABA81821.1| RE44291p [Drosophila melanogaster]
gi|113194669|gb|ABI31108.1| orthopedia, isoform C [Drosophila melanogaster]
Length = 271
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 36/48 (75%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RHRT FT QL +LE F KTHYPD+ +RE++A+++ L E RV+
Sbjct: 11 NKQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQ 58
>gi|449269616|gb|EMC80374.1| Visual system homeobox 1, partial [Columba livia]
Length = 204
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 25 RKKRRHRTVFTAHQLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQ 72
>gi|402589123|gb|EJW83055.1| hypothetical protein WUBG_06036 [Wuchereria bancrofti]
Length = 221
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 9 MVAVAYPNLYPGYMTHAAATIAAMAASQHSAPPPKRK-RRHRTIFTEEQLEQLEATFEKT 67
M + Y ++ M A+ I ++ +S + KRK RRHRTIFT+ Q+++LE F++
Sbjct: 1 MSGMDYASIRSNSMFGASTAITSIPSSSNQKSISKRKKRRHRTIFTQFQVDELEKAFQEA 60
Query: 68 HYPDVVLREQLALKVDLKEERVE 90
HYPD+ RE LA+K ++ +R++
Sbjct: 61 HYPDMYAREILAMKTEIAVDRIQ 83
>gi|380805315|gb|AFE74533.1| homeobox protein ARX, partial [Macaca mulatta]
Length = 161
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV RE+LA+++DL E RV+
Sbjct: 52 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 99
>gi|3204112|emb|CAA11365.1| Pax6 [Branchiostoma floridae]
Length = 431
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 43 KRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
KRK +R+RT FT+EQ+E LE FE+THYPDV RE+LA K+DL E R++
Sbjct: 216 KRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ 264
>gi|3204114|emb|CAA11366.1| Pax6 [Branchiostoma floridae]
Length = 439
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 43 KRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
KRK +R+RT FT+EQ+E LE FE+THYPDV RE+LA K+DL E R++
Sbjct: 224 KRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ 272
>gi|156377156|ref|XP_001630723.1| predicted protein [Nematostella vectensis]
gi|156217749|gb|EDO38660.1| predicted protein [Nematostella vectensis]
Length = 467
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 26 AATIAAMAASQHSAPPPKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDL 84
A+T + A KRK RR+RT FT +QLE LE FEK+HYPDV RE+LA K+D+
Sbjct: 309 ASTDDERGKDEDPATNQKRKLRRNRTTFTPDQLEMLEKEFEKSHYPDVATREELANKIDM 368
Query: 85 KEERVE 90
E RV+
Sbjct: 369 SEARVQ 374
>gi|38569883|gb|AAR24459.1| Otx-like homeodomain transcription factor [Nematostella
vectensis]
Length = 229
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT+ QLE LE F KT YPD+ +RE++A+K++L E RV+
Sbjct: 38 PRKQRRERTTFTKNQLEILEELFAKTRYPDIFMREEVAIKINLPESRVQ 86
>gi|340730425|gb|AEK64853.1| aristaless-like homeobox 4 protein [Xenopus (Silurana) tropicalis]
Length = 321
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 125 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 171
>gi|270011563|gb|EFA08011.1| hypothetical protein TcasGA2_TC005600 [Tribolium castaneum]
Length = 327
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE+LE+ F +THYPDV RE LA+K++L E RV+
Sbjct: 49 RKQRRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTEARVQ 96
>gi|357614288|gb|EHJ69004.1| paired-like family homeodomain transcription factor [Danaus
plexippus]
Length = 341
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 42 PKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PKRK RR+RT FT QLE+LE F +THYPDV RE+LA+K+ L E R++
Sbjct: 122 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQ 171
>gi|339234715|ref|XP_003378912.1| paired box protein Pax-7 [Trichinella spiralis]
gi|316978520|gb|EFV61502.1| paired box protein Pax-7 [Trichinella spiralis]
Length = 156
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 38/51 (74%)
Query: 40 PPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PP +RRHRT FT+EQL++LEA F K+HYPD+ +RE+LA L E R++
Sbjct: 26 PPTPARRRHRTTFTQEQLQELEAAFGKSHYPDIYVREELARVTKLNEARIQ 76
>gi|328792459|ref|XP_001120088.2| PREDICTED: homeobox protein orthopedia-like [Apis mellifera]
Length = 352
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/49 (53%), Positives = 37/49 (75%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P +++RHRT FT QL +LE F +THYPD+ LRE++A+K+ L E RV+
Sbjct: 75 PAKQKRHRTRFTPAQLNELERCFNRTHYPDIFLREEIAVKIGLTESRVQ 123
>gi|3024855|sp|Q90277.1|VSX1_CARAU RecName: Full=Visual system homeobox 1; AltName: Full=Homeobox
protein VSX-1; AltName: Full=Transcription factor VSX1
gi|460928|gb|AAC24600.1| Vsx-1 homeobox protein [Carassius auratus]
Length = 341
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 146 RKKRRHRTVFTSHQLEELEKAFHEAHYPDVYAREMLAMKTELPEDRIQ 193
>gi|334312715|ref|XP_003339770.1| PREDICTED: visual system homeobox 1-like [Monodelphis domestica]
Length = 348
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/48 (58%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LALK +L E+R++
Sbjct: 170 RKKRRHRTVFTAHQLEELEKAFNEAHYPDVYAREMLALKTELPEDRIQ 217
>gi|6679401|ref|NP_032914.1| paired mesoderm homeobox protein 2B [Mus musculus]
gi|12707580|ref|NP_003915.2| paired mesoderm homeobox protein 2B [Homo sapiens]
gi|109074098|ref|XP_001098028.1| PREDICTED: paired mesoderm homeobox protein 2B [Macaca mulatta]
gi|114593819|ref|XP_001149518.1| PREDICTED: paired mesoderm homeobox protein 2B [Pan troglodytes]
gi|332219062|ref|XP_003258677.1| PREDICTED: paired mesoderm homeobox protein 2B [Nomascus
leucogenys]
gi|426344195|ref|XP_004038660.1| PREDICTED: paired mesoderm homeobox protein 2B [Gorilla gorilla
gorilla]
gi|6093753|sp|O35690.1|PHX2B_MOUSE RecName: Full=Paired mesoderm homeobox protein 2B; AltName:
Full=Neuroblastoma Phox; Short=NBPhox; AltName:
Full=PHOX2B homeodomain protein; AltName:
Full=Paired-like homeobox 2B
gi|116242712|sp|Q99453.2|PHX2B_HUMAN RecName: Full=Paired mesoderm homeobox protein 2B; AltName:
Full=Neuroblastoma Phox; Short=NBPhox; AltName:
Full=PHOX2B homeodomain protein; AltName:
Full=Paired-like homeobox 2B
gi|2632151|emb|CAA74833.1| PHOX2b protein [Mus musculus]
gi|5672613|dbj|BAA82671.1| NBPhox [Mus musculus]
gi|16877955|gb|AAH17199.1| Paired-like homeobox 2b [Homo sapiens]
gi|50927508|gb|AAH79610.1| Paired-like homeobox 2b [Mus musculus]
gi|119613395|gb|EAW92989.1| paired-like homeobox 2b [Homo sapiens]
gi|148705829|gb|EDL37776.1| paired-like homeobox 2b [Mus musculus]
Length = 314
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 13/100 (13%)
Query: 1 MRIATGASMVAVAYPNLYPGYMT------HAAATIAAM---AASQHSAPPPKRK-RRHRT 50
+R GA+ P+L PG + H ++ AA+ + H KRK RR RT
Sbjct: 47 IRTTFGAT---SGCPSLTPGSCSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRT 103
Query: 51 IFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
FT QL++LE F +THYPD+ RE+LALK+DL E RV+
Sbjct: 104 TFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 143
>gi|392353126|ref|XP_344240.4| PREDICTED: paired mesoderm homeobox protein 2B [Rattus norvegicus]
Length = 301
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 13/100 (13%)
Query: 1 MRIATGASMVAVAYPNLYPGYMT------HAAATIAAM---AASQHSAPPPKRK-RRHRT 50
+R GA+ P+L PG + H ++ AA+ + H KRK RR RT
Sbjct: 47 IRTTFGAT---SGCPSLTPGSCSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRT 103
Query: 51 IFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
FT QL++LE F +THYPD+ RE+LALK+DL E RV+
Sbjct: 104 TFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 143
>gi|390351642|ref|XP_797654.3| PREDICTED: uncharacterized protein LOC593067 [Strongylocentrotus
purpuratus]
Length = 392
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR RT FT QL++LE F +THYPD+ RE+LALK DL E RV+
Sbjct: 111 RKQRRIRTTFTSAQLKELEKAFNETHYPDIYKREELALKTDLTEARVQ 158
>gi|284005034|ref|NP_001164681.1| paired-like homeobox 2 [Saccoglossus kowalevskii]
gi|283464071|gb|ADB22619.1| paired-like homeobox 2 [Saccoglossus kowalevskii]
Length = 264
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 38 SAPPPKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P KRK RR RT FT QL++LE F++THYPD+ RE+LALK DL E RV+
Sbjct: 101 GGPGEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYKREELALKTDLTEARVQ 154
>gi|350425133|ref|XP_003494022.1| PREDICTED: homeobox protein ARX-like [Bombus impatiens]
Length = 385
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 42 PKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PKRK RR+RT FT QLE+LE F +THYPDV RE+LA+K+ L E R++
Sbjct: 153 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQ 202
>gi|30841697|gb|AAP34699.1| aristaless-like homeobox protein [Lytechinus variegatus]
Length = 429
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/48 (60%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRR+RT FT QLE++E F++THYPDV REQLAL+ DL E RV+
Sbjct: 115 RKKRRNRTTFTSYQLEEMEKVFQRTHYPDVYCREQLALRCDLTEARVQ 162
>gi|325516453|gb|ADZ24785.1| Otx [Terebratalia transversa]
Length = 270
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 39/49 (79%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT F+ QL+ LEA F+KT YPD+ +RE++ALK++L E RV+
Sbjct: 47 PRKQRRERTTFSRAQLDILEALFQKTRYPDIFMREEVALKINLPESRVQ 95
>gi|344280090|ref|XP_003411818.1| PREDICTED: visual system homeobox 1-like [Loxodonta africana]
Length = 366
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/53 (56%), Positives = 38/53 (71%)
Query: 38 SAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
SA ++KRRHRT+FT QLE+LE F + HYPDV RE LA+K L E+RV+
Sbjct: 158 SAAGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYARETLAMKTKLPEDRVQ 210
>gi|395856676|ref|XP_003800747.1| PREDICTED: uncharacterized protein LOC100945104 isoform 2 [Otolemur
garnettii]
Length = 281
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 10/86 (11%)
Query: 15 PNLYPGYMT------HAAATIAAM---AASQHSAPPPKRK-RRHRTIFTEEQLEQLEATF 64
P+L PG + H ++ AA+ + H KRK RR RT FT QL++LE F
Sbjct: 58 PSLTPGSCSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKELERVF 117
Query: 65 EKTHYPDVVLREQLALKVDLKEERVE 90
+THYPD+ RE+LALK+DL E RV+
Sbjct: 118 AETHYPDIYTREELALKIDLTEARVQ 143
>gi|444301236|gb|AGD98731.1| paired box 6.2 [Callorhinchus milii]
Length = 302
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 43 KRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
KRK +R+RT FT++Q+E LE FE+THYPDV RE+LA K+DL E R++
Sbjct: 91 KRKLQRNRTSFTQDQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ 139
>gi|307208998|gb|EFN86198.1| Homeobox protein prophet of Pit-1 [Harpegnathos saltator]
Length = 347
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 38 SAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
S P P R RRHRT FT+EQL +LE+ F K+HYPD+ RE+LA L E R++
Sbjct: 101 SCPTPAR-RRHRTTFTQEQLAELESAFAKSHYPDIYCREELARTTKLNEARIQ 152
>gi|156401270|ref|XP_001639214.1| predicted protein [Nematostella vectensis]
gi|156226341|gb|EDO47151.1| predicted protein [Nematostella vectensis]
Length = 75
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 45/58 (77%)
Query: 33 AASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+ S++ A +++RR+RT FT++QL++LE FEK HYPD+ LRE+LA K+++ E R++
Sbjct: 4 SDSENPATVRRKQRRNRTTFTKQQLQELEKVFEKKHYPDIALREELAAKINISEARIQ 61
>gi|395856674|ref|XP_003800746.1| PREDICTED: uncharacterized protein LOC100945104 isoform 1 [Otolemur
garnettii]
Length = 279
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 10/86 (11%)
Query: 15 PNLYPGYMT------HAAATIAAM---AASQHSAPPPKRK-RRHRTIFTEEQLEQLEATF 64
P+L PG + H ++ AA+ + H KRK RR RT FT QL++LE F
Sbjct: 58 PSLTPGSCSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKELERVF 117
Query: 65 EKTHYPDVVLREQLALKVDLKEERVE 90
+THYPD+ RE+LALK+DL E RV+
Sbjct: 118 AETHYPDIYTREELALKIDLTEARVQ 143
>gi|391341560|ref|XP_003745097.1| PREDICTED: retinal homeobox protein Rx1-like [Metaseiulus
occidentalis]
Length = 245
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 38/50 (76%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P K+ RR+RT FT QL +LE FEK+HYPDV RE+LALKV+L E RV+
Sbjct: 53 PSKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQ 102
>gi|340369432|ref|XP_003383252.1| PREDICTED: hypothetical protein LOC100635424 [Amphimedon
queenslandica]
Length = 337
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 36/48 (75%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
K+KRR+RT FT QL +LE FE+THYPDV RE LA +V+L E RV+
Sbjct: 80 KKKRRYRTTFTSFQLRELEKAFERTHYPDVFTREDLANRVELTEARVQ 127
>gi|281485132|gb|ADA70356.1| paired-like family homeodomain transcription factor [Heliconius
erato]
Length = 265
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 42 PKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PKRK RR+RT FT QLE+LE F +THYPDV RE+LA+K+ L E R++
Sbjct: 45 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQ 94
>gi|194853616|ref|XP_001968194.1| GG24732 [Drosophila erecta]
gi|190660061|gb|EDV57253.1| GG24732 [Drosophila erecta]
Length = 352
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT F QL++LE F++THYPDV RE+LA+++DL E RV+
Sbjct: 3 RKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQ 50
>gi|170590608|ref|XP_001900064.1| Retinal homeobox protein Rx3 [Brugia malayi]
gi|158592696|gb|EDP31294.1| Retinal homeobox protein Rx3, putative [Brugia malayi]
Length = 185
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT F ++QL +LEA F K+HYPDV RE+LA+K++L E RV+
Sbjct: 70 RKQRRNRTTFNQQQLNELEAAFRKSHYPDVFAREELAVKINLPEARVQ 117
>gi|395507743|ref|XP_003758180.1| PREDICTED: visual system homeobox 1 [Sarcophilus harrisii]
Length = 346
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/48 (58%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LALK +L E+R++
Sbjct: 169 RKKRRHRTVFTAHQLEELEKAFNEAHYPDVYAREMLALKTELPEDRIQ 216
>gi|319891032|gb|ADV76083.1| orthopedia [Biston betularia]
Length = 130
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 37/49 (75%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P +++RHRT FT QL +LE F KTHYPD+ +RE++A+++ L E RV+
Sbjct: 28 PAKQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQ 76
>gi|156386935|ref|XP_001634166.1| predicted protein [Nematostella vectensis]
gi|156221246|gb|EDO42103.1| predicted protein [Nematostella vectensis]
Length = 214
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 36/49 (73%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P++ RR RT FT QL QLE FEKT YPDV RE+LAL++DL E RV+
Sbjct: 17 PRKVRRSRTTFTTYQLHQLERAFEKTQYPDVFTREELALRLDLSEARVQ 65
>gi|2065052|emb|CAA70980.1| goosecoid 2 [Gallus gallus]
Length = 61
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 35/45 (77%)
Query: 46 RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
RRHRTIFTEEQL+ LE F + YPDV+ RE LA ++ LKEERVE
Sbjct: 2 RRHRTIFTEEQLQALETLFHQNQYPDVITREHLANRIHLKEERVE 46
>gi|449485972|ref|XP_004175263.1| PREDICTED: LOW QUALITY PROTEIN: paired mesoderm homeobox protein
2A, partial [Taeniopygia guttata]
Length = 221
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR RT FT QL++LE F +THYPD+ RE+LALK+DL E RV+
Sbjct: 32 RKQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 79
>gi|327281440|ref|XP_003225456.1| PREDICTED: dorsal root ganglia homeobox protein-like [Anolis
carolinensis]
Length = 261
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LE F +THYPDV RE+LA+K++L E RV+
Sbjct: 31 RKQRRNRTTFTLQQLEALETVFAQTHYPDVFTREELAMKINLTEARVQ 78
>gi|348512783|ref|XP_003443922.1| PREDICTED: homeobox protein aristaless-like 4-like [Oreochromis
niloticus]
Length = 368
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/47 (65%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 173 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 219
>gi|301772146|ref|XP_002921493.1| PREDICTED: paired mesoderm homeobox protein 2B-like, partial
[Ailuropoda melanoleuca]
gi|281351965|gb|EFB27549.1| hypothetical protein PANDA_010383 [Ailuropoda melanoleuca]
Length = 193
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 13/100 (13%)
Query: 1 MRIATGASMVAVAYPNLYPGYMT------HAAATIAAM---AASQHSAPPPKRK-RRHRT 50
+R GA+ P+L PG + H ++ AA+ + H KRK RR RT
Sbjct: 47 IRTTFGAT---SGCPSLTPGSCSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRT 103
Query: 51 IFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
FT QL++LE F +THYPD+ RE+LALK+DL E RV+
Sbjct: 104 TFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 143
>gi|328697098|ref|XP_001944012.2| PREDICTED: retinal homeobox protein Rx-like [Acyrthosiphon pisum]
Length = 290
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Query: 39 APPPKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+PP K+K RR+RT FT QL +LE FEK+HYPDV RE+LA+KV+L E RV+
Sbjct: 90 SPPDKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQ 142
>gi|410909774|ref|XP_003968365.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Takifugu
rubripes]
Length = 299
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR RT FT QL++LE F +THYPD+ RE+LALK+DL E RV+
Sbjct: 90 RKQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 137
>gi|297475806|ref|XP_002688259.1| PREDICTED: paired mesoderm homeobox protein 2B [Bos taurus]
gi|296486633|tpg|DAA28746.1| TPA: paired-like homeobox 2b-like [Bos taurus]
Length = 315
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 10/86 (11%)
Query: 15 PNLYPGYMT------HAAATIAAM---AASQHSAPPPKRK-RRHRTIFTEEQLEQLEATF 64
P+L PG + H ++ AA+ + H KRK RR RT FT QL++LE F
Sbjct: 58 PSLTPGSCSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKELERVF 117
Query: 65 EKTHYPDVVLREQLALKVDLKEERVE 90
+THYPD+ RE+LALK+DL E RV+
Sbjct: 118 AETHYPDIYTREELALKIDLTEARVQ 143
>gi|296196663|ref|XP_002745937.1| PREDICTED: paired mesoderm homeobox protein 2B [Callithrix jacchus]
Length = 314
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 10/86 (11%)
Query: 15 PNLYPGYMT------HAAATIAAM---AASQHSAPPPKRK-RRHRTIFTEEQLEQLEATF 64
P+L PG + H ++ AA+ + H KRK RR RT FT QL++LE F
Sbjct: 58 PSLTPGSCSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKELERVF 117
Query: 65 EKTHYPDVVLREQLALKVDLKEERVE 90
+THYPD+ RE+LALK+DL E RV+
Sbjct: 118 AETHYPDIYTREELALKIDLTEARVQ 143
>gi|221103284|ref|XP_002161581.1| PREDICTED: homeobox protein OTX2-B-like [Hydra magnipapillata]
Length = 272
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 37/49 (75%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT+ QLE LE F KTHYPD+ +RE+ A K++L E RV+
Sbjct: 50 PRKQRRERTTFTKSQLEILEELFLKTHYPDIFMREEAARKINLPESRVQ 98
>gi|170052026|ref|XP_001862034.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167872990|gb|EDS36373.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 219
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 42 PKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PKRK RR+RT FT QLE+LE F +THYPDV RE+LA+K+ L E R++
Sbjct: 135 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQ 184
>gi|339252892|ref|XP_003371669.1| ALX homeobox protein 1 [Trichinella spiralis]
gi|316968043|gb|EFV52386.1| ALX homeobox protein 1 [Trichinella spiralis]
Length = 325
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/47 (61%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++RR RT FT QLEQLE+ FE +HYPDV +RE LAL++DL E RV+
Sbjct: 121 KRRRTRTNFTSWQLEQLESAFETSHYPDVFMREALALRLDLVESRVQ 167
>gi|34419191|dbj|BAC84954.1| homeobox protein Chx10-1 [Cynops pyrrhogaster]
Length = 341
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F HYPDV RE LA+K +L E+R++
Sbjct: 147 RKKRRHRTVFTAHQLEELEKAFSDAHYPDVYAREMLAMKTELPEDRIQ 194
>gi|383854434|ref|XP_003702726.1| PREDICTED: uncharacterized protein LOC100883470 [Megachile
rotundata]
Length = 313
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 33 AASQHSAPPPKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
A S H KRK RR RT FT QL++LE F++THYPD+ RE++A+K+DL E RV+
Sbjct: 125 AYSGHDGLAEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 183
>gi|328717525|ref|XP_001950483.2| PREDICTED: retinal homeobox protein Rx2-like [Acyrthosiphon pisum]
Length = 300
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 34/46 (73%)
Query: 45 KRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RRHRT FT+EQL +LEA F K+HYPD+ RE+LA L E R++
Sbjct: 121 RRRHRTTFTQEQLAELEAAFAKSHYPDIYCREELARSTKLNEARIQ 166
>gi|242014875|ref|XP_002428108.1| Homeobox protein OTX1, putative [Pediculus humanus corporis]
gi|212512639|gb|EEB15370.1| Homeobox protein OTX1, putative [Pediculus humanus corporis]
Length = 291
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Query: 35 SQHSAPP--PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
S PP P+++RR RT FT QL+ LEA F KT YPD+ +RE++ALK++L E RV+
Sbjct: 25 SSMGYPPGNPRKQRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQ 82
>gi|260802230|ref|XP_002595995.1| hypothetical protein BRAFLDRAFT_84069 [Branchiostoma floridae]
gi|229281249|gb|EEN52007.1| hypothetical protein BRAFLDRAFT_84069 [Branchiostoma floridae]
Length = 406
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 4/58 (6%)
Query: 37 HSAPP----PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
H PP +++RR RT FT QL++LE F +THYPD+ RE+LALK+DL E RV+
Sbjct: 114 HDGPPGLHEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 171
>gi|158290921|ref|XP_312452.4| AGAP002487-PA [Anopheles gambiae str. PEST]
gi|157018129|gb|EAA08201.4| AGAP002487-PA [Anopheles gambiae str. PEST]
Length = 503
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/72 (45%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 19 PGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQL 78
PG A + S P P R RRHRT FT+EQL +LEA F K+HYPD+ RE+L
Sbjct: 248 PGSGISGLPQHAGHTPTTASCPTPAR-RRHRTTFTQEQLAELEAAFAKSHYPDIYCREEL 306
Query: 79 ALKVDLKEERVE 90
A L E R++
Sbjct: 307 ARTTKLNEARIQ 318
>gi|410957796|ref|XP_003985510.1| PREDICTED: paired mesoderm homeobox protein 2B [Felis catus]
Length = 232
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 13/100 (13%)
Query: 1 MRIATGASMVAVAYPNLYPGYMT------HAAATIAAM---AASQHSAPPPKRK-RRHRT 50
+R GA+ P+L PG + H ++ AA+ + H KRK RR RT
Sbjct: 47 IRTTFGAT---SGCPSLTPGSCSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRT 103
Query: 51 IFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
FT QL++LE F +THYPD+ RE+LALK+DL E RV+
Sbjct: 104 TFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 143
>gi|348504974|ref|XP_003440036.1| PREDICTED: retinal homeobox protein Rx1-like [Oreochromis
niloticus]
Length = 355
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P K+ RR+RT FT QL +LE FEK+HYPDV RE+LA+KV+L E RV+
Sbjct: 139 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQ 188
>gi|260792042|ref|XP_002591036.1| paired box protein 6 [Branchiostoma floridae]
gi|229276236|gb|EEN47047.1| paired box protein 6 [Branchiostoma floridae]
Length = 981
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 43 KRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
KRK +R+RT FT+EQ+E LE FE+THYPDV RE+LA K+DL E R++
Sbjct: 745 KRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ 793
>gi|242009008|ref|XP_002425285.1| homeobox protein arx, putative [Pediculus humanus corporis]
gi|212509050|gb|EEB12547.1| homeobox protein arx, putative [Pediculus humanus corporis]
Length = 513
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE+LE F +THYPDV RE LA+K++L E RV+
Sbjct: 48 RKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQ 95
>gi|293341707|ref|XP_001077800.2| PREDICTED: uncharacterized protein LOC364152 [Rattus norvegicus]
Length = 270
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 13/100 (13%)
Query: 1 MRIATGASMVAVAYPNLYPGYMT------HAAATIAAMA---ASQHSAPPPKRK-RRHRT 50
+R GA+ P+L PG + H ++ AA+ + H KRK RR RT
Sbjct: 47 IRTTFGAT---SGCPSLTPGSCSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRT 103
Query: 51 IFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
FT QL++LE F +THYPD+ RE+LALK+DL E RV+
Sbjct: 104 TFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 143
>gi|189240302|ref|XP_001813949.1| PREDICTED: similar to CG34340 CG34340-PD [Tribolium castaneum]
Length = 283
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE+LE+ F +THYPDV RE LA+K++L E RV+
Sbjct: 67 RKQRRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTEARVQ 114
>gi|449504259|ref|XP_002198614.2| PREDICTED: homeobox protein aristaless-like 4 [Taeniopygia guttata]
Length = 429
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 190 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 236
>gi|47225662|emb|CAG08005.1| unnamed protein product [Tetraodon nigroviridis]
Length = 216
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P K+ RR+RT FT QL +LE FEK+HYPDV RE+LA+KV+L E RV+
Sbjct: 5 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQ 54
>gi|786328|gb|AAB32671.1| Pax-6 [Rattus sp.]
gi|446399|prf||1911405A PAX-6 gene
Length = 269
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 43 KRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
KRK +R+RT FT+EQ+E LE FE+THYPDV RE+LA K+DL E R++
Sbjct: 114 KRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ 162
>gi|307182442|gb|EFN69677.1| Paired mesoderm homeobox protein 2B [Camponotus floridanus]
Length = 368
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 33 AASQHSAPPPKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
A S H KRK RR RT FT QL++LE F++THYPD+ RE++A+K+DL E RV+
Sbjct: 126 AYSGHDGLAEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 184
>gi|17552732|ref|NP_498251.1| Protein CEH-10 [Caenorhabditis elegans]
gi|1170306|sp|P41935.1|HM10_CAEEL RecName: Full=Homeobox protein ceh-10
gi|643650|gb|AAA93063.1| homeobox protein [Caenorhabditis elegans]
gi|373220424|emb|CCD73324.1| Protein CEH-10 [Caenorhabditis elegans]
Length = 344
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRTIFT+ Q+++LE F+ +HYPD+ RE LA K +L+E+R++
Sbjct: 134 RKKRRHRTIFTQYQIDELEKAFQDSHYPDIYAREVLAGKTELQEDRIQ 181
>gi|117581732|gb|ABK41271.1| orthodenticle B [Acropora millepora]
Length = 230
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 39/50 (78%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PP+++RR RT FT+ QLE L+ F KT YPD+ +RE++A+K++L E RV+
Sbjct: 36 PPRKQRRERTTFTKAQLEILDELFAKTKYPDIFMREEVAMKINLPESRVQ 85
>gi|4426551|dbj|BAA20936.1| mdkPax-6 [Oryzias sp.]
Length = 213
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 43 KRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
KRK +R+RT FT+EQ+E LE FE+THYPDV RE+LA K+DL E R++
Sbjct: 80 KRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ 128
>gi|2240022|gb|AAB62323.1| retinal homeobox 2A [Xenopus laevis]
Length = 325
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P K+ RR+RT FT QL +LE FEK+HYPDV RE+LA+KV+L E RV+
Sbjct: 126 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQ 175
>gi|443687177|gb|ELT90234.1| hypothetical protein CAPTEDRAFT_154864 [Capitella teleta]
Length = 335
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 39 APPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P P R RRHRT FT+EQL++LEA F K+HYPD+ +RE+LA L E R++
Sbjct: 111 CPTPAR-RRHRTTFTQEQLQELEAAFAKSHYPDIYVREELARVTKLNEARIQ 161
>gi|21955176|ref|NP_665710.1| dorsal root ganglia homeobox protein [Rattus norvegicus]
gi|6015028|sp|Q62798.1|DRGX_RAT RecName: Full=Dorsal root ganglia homeobox protein; AltName:
Full=Dorsal root ganglion 11; AltName: Full=Homeobox
protein DRG11; AltName: Full=Paired-related homeobox
protein-like 1
gi|1144015|gb|AAA87203.1| paired-like homeodomain transcription factor [Rattus norvegicus]
Length = 263
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT F +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 31 RKQRRNRTTFALQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 78
>gi|269784949|ref|NP_001161626.1| paired mesoderm homeobox 2-like protein [Saccoglossus kowalevskii]
gi|268054257|gb|ACY92615.1| paired mesoderm homeobox 2-like protein [Saccoglossus kowalevskii]
Length = 242
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 35/48 (72%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
K++RR RT FT QL LE FE+THYPD +RE+LA KVDL E RV+
Sbjct: 97 KKQRRSRTTFTTNQLGALEKVFERTHYPDAFVREELAKKVDLSEARVQ 144
>gi|226425745|gb|ACO53862.1| OtxB [Nematostella vectensis]
gi|386370766|gb|AFJ11250.1| OxtB [Nematostella vectensis]
Length = 201
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT+ QLE LE F KT YPD+ +RE++A+K++L E RV+
Sbjct: 38 PRKQRRERTTFTKNQLEILEELFAKTRYPDIFMREEVAIKINLPESRVQ 86
>gi|344030242|ref|NP_001230663.1| retinal homeobox protein Rx [Taeniopygia guttata]
Length = 316
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P K+ RR+RT FT QL +LE FEK+HYPDV RE+LA+KV+L E RV+
Sbjct: 117 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAIKVNLPEVRVQ 166
>gi|410921502|ref|XP_003974222.1| PREDICTED: retinal homeobox protein Rx1-like [Takifugu rubripes]
Length = 350
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P K+ RR+RT FT QL +LE FEK+HYPDV RE+LA+KV+L E RV+
Sbjct: 139 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQ 188
>gi|157278547|ref|NP_001098374.1| Rx3 protein [Oryzias latipes]
gi|15667414|emb|CAC69975.1| Rx3 protein [Oryzias latipes]
Length = 292
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
K+ RR+RT FT QL +LE FEK+HYPDV RE+LALKV+L E RV+
Sbjct: 101 KKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQ 148
>gi|341883828|gb|EGT39763.1| CBN-CEH-10 protein [Caenorhabditis brenneri]
Length = 326
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRTIFT+ Q+++LE F+ HYPDV RE LA K +L+E+R++
Sbjct: 132 RKKRRHRTIFTQYQIDELEKAFQDAHYPDVYARETLAGKTELQEDRIQ 179
>gi|148230627|ref|NP_001081689.1| retinal homeobox protein Rx-B [Xenopus laevis]
gi|292495034|sp|O42567.2|RXB_XENLA RecName: Full=Retinal homeobox protein Rx-B; AltName: Full=Retina
and anterior neural fold homeobox protein B; AltName:
Full=Rx2A; Short=Xrx2
gi|114107824|gb|AAI23154.1| Rx2A protein [Xenopus laevis]
Length = 325
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P K+ RR+RT FT QL +LE FEK+HYPDV RE+LA+KV+L E RV+
Sbjct: 126 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQ 175
>gi|431906259|gb|ELK10456.1| Paired box protein Pax-7 [Pteropus alecto]
Length = 342
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR RT FT EQLE+LE FE+THYPD+ RE+LA + L E RV+
Sbjct: 52 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQ 99
>gi|45382115|ref|NP_990100.1| visual system homeobox 1 [Gallus gallus]
gi|25009570|sp|Q9IAL2.1|VSX1_CHICK RecName: Full=Visual system homeobox 1; AltName: Full=Homeobox
protein Chx10-1; AltName: Full=Transcription factor VSX1
gi|7211446|gb|AAF40312.1|AF178670_1 homeobox protein Chx10-1 [Gallus gallus]
Length = 350
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 155 RKKRRHRTVFTAHQLEELEKAFNEAHYPDVYAREMLAVKTELPEDRIQ 202
>gi|74178801|dbj|BAE34043.1| unnamed protein product [Mus musculus]
Length = 363
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LA K +L E+R++
Sbjct: 169 RKKRRHRTVFTAHQLEELEKAFGEAHYPDVYAREMLAAKTELPEDRIQ 216
>gi|221123753|ref|XP_002163599.1| PREDICTED: homeobox protein ARX-like [Hydra magnipapillata]
Length = 207
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 22 MTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALK 81
H + + + S+ + +++RHRT F QL +LE F KTHYPD+ +RE+LAL+
Sbjct: 24 FNHRSFKVKNLTESEDESDGCLKQKRHRTRFNPSQLNELERYFNKTHYPDIFVREELALR 83
Query: 82 VDLKEERVE 90
+ L E RV+
Sbjct: 84 IGLTESRVQ 92
>gi|17137502|ref|NP_477330.1| PvuII-PstI homology 13 [Drosophila melanogaster]
gi|4972032|emb|CAB43867.1| Munster protein [Drosophila melanogaster]
gi|7296182|gb|AAF51474.1| PvuII-PstI homology 13 [Drosophila melanogaster]
gi|94400518|gb|ABF17900.1| FI01102p [Drosophila melanogaster]
Length = 357
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT F QL++LE F++THYPDV RE+LA+++DL E RV+
Sbjct: 8 RKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQ 55
>gi|18203021|sp|Q9I9D5.1|RX1_ASTFA RecName: Full=Retinal homeobox protein Rx1
gi|8099680|gb|AAF72201.1|AF264703_1 retinal homeobox protein [Astyanax mexicanus]
Length = 334
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P K+ RR+RT FT QL +LE FEK+HYPDV RE+LA+KV+L E RV+
Sbjct: 138 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQ 187
>gi|432108245|gb|ELK33133.1| Paired mesoderm homeobox protein 2B [Myotis davidii]
Length = 236
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 13/100 (13%)
Query: 1 MRIATGASMVAVAYPNLYPGYMT------HAAATIAAMA---ASQHSAPPPKRK-RRHRT 50
+R GA+ P+L PG + H ++ AA+ + H KRK RR RT
Sbjct: 30 IRTTFGATS---GCPSLTPGSCSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRT 86
Query: 51 IFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
FT QL++LE F +THYPD+ RE+LALK+DL E RV+
Sbjct: 87 TFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 126
>gi|348514896|ref|XP_003444976.1| PREDICTED: hypothetical protein LOC100711376 [Oreochromis
niloticus]
Length = 556
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/47 (61%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT F+ QLE+LE F+KTHYPDV REQLAL+ +L E RV+
Sbjct: 352 KKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTELTEARVQ 398
>gi|449270500|gb|EMC81167.1| Paired mesoderm homeobox protein 2A, partial [Columba livia]
Length = 178
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR RT FT QL++LE F +THYPD+ RE+LALK+DL E RV+
Sbjct: 16 RKQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 63
>gi|295389208|gb|ADG03434.1| homeobrain [Nematostella vectensis]
Length = 294
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 36/49 (73%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P++ RR RT FT QL QLE FEKT YPDV RE+LAL++DL E RV+
Sbjct: 97 PRKVRRSRTTFTTYQLHQLERAFEKTQYPDVFTREELALRLDLSEARVQ 145
>gi|195456007|ref|XP_002074962.1| GK22873 [Drosophila willistoni]
gi|194171047|gb|EDW85948.1| GK22873 [Drosophila willistoni]
Length = 395
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 35/49 (71%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P++ RR RT FT QL QLE FEKT YPDV RE LA+++DL E RV+
Sbjct: 138 PRKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQ 186
>gi|86564116|ref|NP_505519.3| Protein UNC-42, isoform a [Caenorhabditis elegans]
gi|77799281|emb|CAA94780.3| Protein UNC-42, isoform a [Caenorhabditis elegans]
Length = 264
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 37/46 (80%)
Query: 45 KRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RRHRT FT+EQL++L+A F+K+HYPD+ +RE+LA L E R++
Sbjct: 85 RRRHRTTFTQEQLQELDAAFQKSHYPDIYVREELARITKLNEARIQ 130
>gi|47223097|emb|CAG07184.1| unnamed protein product [Tetraodon nigroviridis]
Length = 184
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
K+ RR+RT FT QL +LE FEK+HYPDV RE+LA+KV+L E RV+
Sbjct: 9 KKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQ 56
>gi|47230174|emb|CAG10588.1| unnamed protein product [Tetraodon nigroviridis]
Length = 346
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/54 (51%), Positives = 40/54 (74%)
Query: 37 HSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+ A P+++RR RT FT QL+ LEA F KT YPD+ +RE++ALK++L E RV+
Sbjct: 86 YQAATPRKQRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQ 139
>gi|16905095|ref|NP_473409.1| visual system homeobox 1 [Mus musculus]
gi|25009568|sp|Q91V10.1|VSX1_MOUSE RecName: Full=Visual system homeobox 1; AltName: Full=Homeodomain
protein RINX; AltName: Full=Retinal inner nuclear layer
homeobox protein; AltName: Full=Transcription factor
VSX1
gi|15811381|gb|AAL08947.1|AF395732_1 visual system homeobox 1 [Mus musculus]
gi|15825170|gb|AAL09584.1|AF391757_1 homeodomain protein RINX [Mus musculus]
gi|15825172|gb|AAL09585.1|AF391758_1 homeodomain protein RINX [Mus musculus]
gi|16580161|gb|AAL11431.1| transcription factor VSX1 [Mus musculus]
gi|34785871|gb|AAH57647.1| Visual system homeobox 1 homolog (zebrafish) [Mus musculus]
gi|187953917|gb|AAI38461.1| Vsx1 protein [Mus musculus]
gi|223460705|gb|AAI38457.1| Vsx1 protein [Mus musculus]
Length = 363
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LA K +L E+R++
Sbjct: 169 RKKRRHRTVFTAHQLEELEKAFGEAHYPDVYAREMLAAKTELPEDRIQ 216
>gi|270210217|gb|ACX30667.2| aristaless 2 [Junonia coenia]
Length = 212
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 42 PKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+RK RR+RT FT QL++LE F +THYPDV RE+LALK+ L E R++
Sbjct: 8 PRRKQRRYRTTFTSYQLDELEKAFGRTHYPDVFTREELALKIGLTEARIQ 57
>gi|157132386|ref|XP_001662548.1| hypothetical protein AaeL_AAEL012405 [Aedes aegypti]
gi|108871202|gb|EAT35427.1| AAEL012405-PA [Aedes aegypti]
Length = 253
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 42 PKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PKRK RR+RT FT QLE+LE F +THYPDV RE+LA+K+ L E R++
Sbjct: 193 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQ 242
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 42 PKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVV 73
PKRK RR+RT FT QLE+LE F +THYPDV
Sbjct: 78 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVF 110
>gi|51949781|gb|AAU14814.1| paired box 6 [Mustela putorius furo]
Length = 158
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 43 KRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
KRK +R+RT FT+EQ+E LE FE+THYPDV RE+LA K+DL E R++
Sbjct: 100 KRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ 148
>gi|391333276|ref|XP_003741045.1| PREDICTED: ALX homeobox protein 1-like [Metaseiulus occidentalis]
Length = 266
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 45 KRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RRHRT FT+EQL++LE+ F K+HYPD+ RE+LA L E R++
Sbjct: 72 RRRHRTTFTQEQLQELESAFAKSHYPDIYCREELARITKLNEARIQ 117
>gi|383861855|ref|XP_003706400.1| PREDICTED: homeobox protein orthopedia-like [Megachile rotundata]
Length = 348
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/49 (53%), Positives = 37/49 (75%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P +++RHRT FT QL +LE F +THYPD+ LRE++A+K+ L E RV+
Sbjct: 69 PAKQKRHRTRFTPAQLNELERCFNRTHYPDIFLREEIAVKIGLTESRVQ 117
>gi|354475607|ref|XP_003500019.1| PREDICTED: visual system homeobox 1-like [Cricetulus griseus]
Length = 318
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/51 (54%), Positives = 38/51 (74%)
Query: 40 PPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P ++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 111 PGKRKKRRHRTVFTAHQLEELEKAFGEAHYPDVYAREMLAVKTELPEDRIQ 161
>gi|322788168|gb|EFZ13950.1| hypothetical protein SINV_05767 [Solenopsis invicta]
Length = 71
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 36/45 (80%)
Query: 46 RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
RRHRTIFT +QLE LEA F++ HYPDV RE L+L+ DL E+R++
Sbjct: 27 RRHRTIFTSQQLEALEAAFKEAHYPDVYAREMLSLRTDLPEDRIQ 71
>gi|194753688|ref|XP_001959142.1| GF12736 [Drosophila ananassae]
gi|190620440|gb|EDV35964.1| GF12736 [Drosophila ananassae]
Length = 410
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 35/49 (71%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P++ RR RT FT QL QLE FEKT YPDV RE LA+++DL E RV+
Sbjct: 141 PRKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQ 189
>gi|357616186|gb|EHJ70056.1| homeobrain [Danaus plexippus]
Length = 261
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 7/76 (9%)
Query: 15 PNLYPGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVL 74
PN+ PG H + A+ A + P++ RR RT FT QL +LE F+KT YPDV
Sbjct: 60 PNVEPGRADHEP--LEALDAGR-----PRKVRRSRTTFTTYQLHELERAFDKTQYPDVFT 112
Query: 75 REQLALKVDLKEERVE 90
RE+LAL++DL E RV+
Sbjct: 113 REELALRLDLSEARVQ 128
>gi|327279568|ref|XP_003224528.1| PREDICTED: homeobox protein prophet of Pit-1-like [Anolis
carolinensis]
Length = 230
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 34/46 (73%)
Query: 45 KRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RRHRT F++EQL+QLEA F K HYPD+ RE+LA L E R++
Sbjct: 71 RRRHRTTFSQEQLDQLEAAFAKNHYPDIYCREELARTTKLNEARIQ 116
>gi|319740964|gb|ADV69001.1| retinal homeobox [Patiria miniata]
Length = 314
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
K+ RR+RT FT QL +LE FEK+HYPDV RE+LALKV+L E RV+
Sbjct: 213 KKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQ 260
>gi|431906966|gb|ELK11085.1| Retinal homeobox protein Rx [Pteropus alecto]
Length = 215
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 19 PGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQL 78
PG AA A ++ + P K+ RR+RT FT QL +LE FEK+HYPDV RE+L
Sbjct: 113 PGMTAGPAAGDAKLSEEEQ---PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREEL 169
Query: 79 ALKVDLKEERVE 90
A KV+L E RV+
Sbjct: 170 AGKVNLPEVRVQ 181
>gi|31566395|gb|AAH53599.1| ESX homeobox 1 [Homo sapiens]
gi|54611484|gb|AAH42633.1| ESX homeobox 1 [Homo sapiens]
Length = 406
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 41/50 (82%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PP+RKRR RT FT+ QL++LE F+++ YPDVV RE+LA +++L E+RV+
Sbjct: 135 PPERKRRRRTAFTQFQLQELENFFDESQYPDVVARERLAARLNLTEDRVQ 184
>gi|405973681|gb|EKC38378.1| Homeobox protein orthopedia [Crassostrea gigas]
Length = 285
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P +++RHRT FT QL +LE +F KTHYPD+ +RE+LAL++ L E RV+
Sbjct: 61 PSKQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQ 109
>gi|344030211|ref|NP_989435.2| retinal homeobox protein Rx2 [Gallus gallus]
gi|18203380|sp|Q9PVY0.1|RX1_CHICK RecName: Full=Retinal homeobox protein Rx1; Short=cRax1
gi|23451261|gb|AAN32719.1|AF420601_1 homeobox transcription factor RAX2 [Gallus gallus]
gi|6002393|dbj|BAA84748.1| homeobox protein cRaxL/Rax1/Rx1 [Gallus gallus]
Length = 228
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P K+ RR+RT FT QL +LE FEK+HYPDV RE+LA+KV+L E RV+
Sbjct: 32 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQ 81
>gi|341879343|gb|EGT35278.1| hypothetical protein CAEBREN_07313 [Caenorhabditis brenneri]
Length = 266
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 37/46 (80%)
Query: 45 KRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RRHRT FT+EQL++L+A F+K+HYPD+ +RE+LA L E R++
Sbjct: 85 RRRHRTTFTQEQLQELDAAFQKSHYPDIYVREELARITKLNEARIQ 130
>gi|110749931|ref|XP_001119966.1| PREDICTED: retinal homeobox protein Rx [Apis mellifera]
Length = 282
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
K+ RR+RT FT QL +LE FEK+HYPDV RE+LA+KV+L E RV+
Sbjct: 89 KKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQ 136
>gi|17861402|gb|AAL39178.1| GH01528p [Drosophila melanogaster]
Length = 357
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT F QL++LE F++THYPDV RE+LA+++DL E RV+
Sbjct: 8 RKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQ 55
>gi|49473529|gb|AAT66433.1| Dmbx [Branchiostoma floridae]
Length = 371
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR RT FT +QL LE F+KTHYPDVV+RE+LA+ +L E RV+
Sbjct: 58 RKQRRSRTAFTSQQLAALEKCFQKTHYPDVVMRERLAMCTNLPESRVQ 105
>gi|443683851|gb|ELT87953.1| hypothetical protein CAPTEDRAFT_174285 [Capitella teleta]
Length = 368
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR RT FT +QL LE TF KTHYPDVV+RE+LA+ +L E R++
Sbjct: 102 RKQRRSRTAFTNQQLAALEKTFSKTHYPDVVMRERLAMMTNLPEARIQ 149
>gi|380023560|ref|XP_003695586.1| PREDICTED: retinal homeobox protein Rx-like [Apis florea]
Length = 282
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
K+ RR+RT FT QL +LE FEK+HYPDV RE+LA+KV+L E RV+
Sbjct: 89 KKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQ 136
>gi|326934275|ref|XP_003213217.1| PREDICTED: retinal homeobox protein Rx1-like [Meleagris
gallopavo]
Length = 228
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P K+ RR+RT FT QL +LE FEK+HYPDV RE+LA+KV+L E RV+
Sbjct: 32 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQ 81
>gi|49473523|gb|AAT66431.1| Dmbx [Branchiostoma floridae]
Length = 371
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR RT FT +QL LE F+KTHYPDVV+RE+LA+ +L E RV+
Sbjct: 58 RKQRRSRTAFTSQQLAALEKCFQKTHYPDVVMRERLAMCTNLPESRVQ 105
>gi|3021450|emb|CAA75668.1| prdl-a [Hydra vulgaris]
Length = 229
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+ +RR+RT FT+ QL++LE F+KTHYPDV +RE+LA++V L E RV+
Sbjct: 38 RNERRYRTTFTQFQLDELERAFDKTHYPDVFMREELAVRVHLTEARVQ 85
>gi|340709854|ref|XP_003393515.1| PREDICTED: retinal homeobox protein Rx-like [Bombus terrestris]
gi|350406119|ref|XP_003487661.1| PREDICTED: retinal homeobox protein Rx-like [Bombus impatiens]
Length = 282
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
K+ RR+RT FT QL +LE FEK+HYPDV RE+LA+KV+L E RV+
Sbjct: 89 KKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQ 136
>gi|126343736|ref|XP_001379904.1| PREDICTED: paired box protein Pax-7-like, partial [Monodelphis
domestica]
Length = 309
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR RT FT EQLE+LE FE+THYPD+ RE+LA + L E RV+
Sbjct: 19 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQ 66
>gi|449271634|gb|EMC81918.1| Homeobox protein aristaless-like 3, partial [Columba livia]
Length = 72
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT F+ QLE+LE F+KTHYPDV REQLAL+ DL E RV+
Sbjct: 3 KKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 49
>gi|297710671|ref|XP_002831994.1| PREDICTED: homeobox protein ESX1 [Pongo abelii]
Length = 412
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 40/50 (80%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PP+RKRR RT FT+ QL++LE F++ YPDVV RE+LA +++L E+RV+
Sbjct: 135 PPERKRRRRTAFTQFQLQELENFFDEAQYPDVVARERLAARLNLTEDRVQ 184
>gi|344030244|ref|NP_001230664.1| retina and anterior neural fold homeobox protein 2 [Taeniopygia
guttata]
Length = 228
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P K+ RR+RT FT QL +LE FEK+HYPDV RE+LA+KV+L E RV+
Sbjct: 32 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQ 81
>gi|47551253|ref|NP_999809.1| aristaless-like homeobox protein [Strongylocentrotus purpuratus]
gi|30841695|gb|AAP34698.1| aristaless-like homeobox protein [Strongylocentrotus purpuratus]
Length = 430
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/48 (60%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRR+RT FT QLE++E F++THYPDV REQLAL+ DL E RV+
Sbjct: 116 RKKRRNRTTFTSYQLEEMEKVFQRTHYPDVYCREQLALRCDLTEARVQ 163
>gi|260802780|ref|XP_002596270.1| hypothetical protein BRAFLDRAFT_116855 [Branchiostoma floridae]
gi|229281524|gb|EEN52282.1| hypothetical protein BRAFLDRAFT_116855 [Branchiostoma floridae]
Length = 371
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR RT FT +QL LE F+KTHYPDVV+RE+LA+ +L E RV+
Sbjct: 58 RKQRRSRTAFTSQQLAALEKCFQKTHYPDVVMRERLAMCTNLPESRVQ 105
>gi|23592228|ref|NP_703149.1| homeobox protein ESX1 [Homo sapiens]
gi|116241356|sp|Q8N693.3|ESX1_HUMAN RecName: Full=Homeobox protein ESX1; AltName: Full=Extraembryonic,
spermatogenesis, homeobox 1; Contains: RecName:
Full=Homeobox protein ESX1-N; Contains: RecName:
Full=Homeobox protein ESX1-C
gi|21629646|gb|AAM62141.1| ESX1L [Homo sapiens]
gi|119623160|gb|EAX02755.1| extraembryonic, spermatogenesis, homeobox 1 homolog (mouse) [Homo
sapiens]
Length = 406
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 41/50 (82%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PP+RKRR RT FT+ QL++LE F+++ YPDVV RE+LA +++L E+RV+
Sbjct: 135 PPERKRRRRTAFTQFQLQELENFFDESQYPDVVARERLAARLNLTEDRVQ 184
>gi|363733528|ref|XP_001234151.2| PREDICTED: paired mesoderm homeobox protein 2B [Gallus gallus]
Length = 250
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 10/86 (11%)
Query: 15 PNLYPGYMT------HAAATIAAMA---ASQHSAPPPKRK-RRHRTIFTEEQLEQLEATF 64
P+L PG + H ++ AA+ + H KRK RR RT FT QL++LE F
Sbjct: 58 PSLTPGSCSLGSLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKELERVF 117
Query: 65 EKTHYPDVVLREQLALKVDLKEERVE 90
+THYPD+ RE+LALK+DL E RV+
Sbjct: 118 AETHYPDIYTREELALKIDLTEARVQ 143
>gi|325980258|gb|ADZ48388.1| Phox2b [Polyodon spathula]
Length = 248
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 55/100 (55%), Gaps = 13/100 (13%)
Query: 1 MRIATGASMVAVAYPNLYPGYMT------HAAATIAAM---AASQHSAPPPKRK-RRHRT 50
+R GA+ P+L PG + H + AA+ + H KRK RR RT
Sbjct: 36 IRTTFGATS---GCPSLTPGSCSLGTLRDHQNSPYAAVPYKLFTDHGGLNEKRKQRRIRT 92
Query: 51 IFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
FT QL++LE F +THYPD+ RE+LALK+DL E RV+
Sbjct: 93 TFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 132
>gi|324518078|gb|ADY46999.1| Homeobox protein ceh-10 [Ascaris suum]
Length = 307
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 42/56 (75%)
Query: 35 SQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+Q S ++KRRHRTIFT+ Q+++LE F++ HYPD+ RE LA+K +L E+R++
Sbjct: 143 TQKSNTTKRKKRRHRTIFTQFQIDELEKAFQEAHYPDMYAREVLAMKTELAEDRIQ 198
>gi|307170805|gb|EFN62921.1| Homeobox protein orthopedia [Camponotus floridanus]
Length = 136
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 22 MTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALK 81
MT A AA+ P +++RHRT FT QL +LE F KTHYPD+ LRE++A++
Sbjct: 55 MTMPGAGSAAVIG--QGDDKPAKQKRHRTRFTPAQLNELERCFAKTHYPDIFLREEIAVR 112
Query: 82 VDLKEERVE 90
+ L E RV+
Sbjct: 113 IGLTESRVQ 121
>gi|402910991|ref|XP_003918127.1| PREDICTED: homeobox protein ESX1 [Papio anubis]
Length = 359
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 40/50 (80%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PP+RKRR RT FT+ QL++LE F++ YPDVV RE+LA +++L E+RV+
Sbjct: 133 PPERKRRRRTAFTQFQLQELENFFDEAQYPDVVARERLAARLNLTEDRVQ 182
>gi|295656520|gb|ADG26723.1| ARX homeobox protein [Platynereis dumerilii]
Length = 283
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLE+LE F+KTHYPDV RE+LA++++L E RV+
Sbjct: 197 RKQRRYRTTFTSFQLEELERAFQKTHYPDVFTREELAMRINLTEARVQ 244
>gi|383861924|ref|XP_003706434.1| PREDICTED: retinal homeobox protein Rx-like [Megachile rotundata]
Length = 281
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
K+ RR+RT FT QL +LE FEK+HYPDV RE+LA+KV+L E RV+
Sbjct: 89 KKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQ 136
>gi|158292555|ref|XP_313972.3| AGAP005096-PA [Anopheles gambiae str. PEST]
gi|157017047|gb|EAA09363.3| AGAP005096-PA [Anopheles gambiae str. PEST]
Length = 898
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
K+ RR+RT FT QL +LE FEK+HYPDV RE+LA+KV+L E RV+
Sbjct: 547 KKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQ 594
>gi|158293967|ref|XP_315326.4| AGAP005311-PA [Anopheles gambiae str. PEST]
gi|157015346|gb|EAA11051.4| AGAP005311-PA [Anopheles gambiae str. PEST]
Length = 349
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 36/49 (73%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P++ RR RT FT QL QLE FEKT YPDV RE+LA+++DL E RV+
Sbjct: 113 PRKIRRSRTTFTTYQLHQLERAFEKTQYPDVFTREELAMRLDLSEARVQ 161
>gi|354489841|ref|XP_003507069.1| PREDICTED: retinal homeobox protein Rx-like, partial [Cricetulus
griseus]
Length = 132
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 15 PNLYPGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVL 74
P PG AA + + + PP K+ RR+RT FT QL +LE FEK+HYPDV
Sbjct: 23 PRPSPGLPVGPAAGDSKLPEEE---PPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 79
Query: 75 REQLALKVDLKEERVE 90
RE+LA KV+L E RV+
Sbjct: 80 REELAGKVNLPEVRVQ 95
>gi|270010993|gb|EFA07441.1| homeobrain [Tribolium castaneum]
Length = 261
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 36/49 (73%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P++ RR RT FT QL QLE FEKT YPDV RE+LA+++DL E RV+
Sbjct: 61 PRKIRRSRTTFTTYQLHQLERAFEKTQYPDVFTREELAMRLDLSEARVQ 109
>gi|449281838|gb|EMC88811.1| Retinal homeobox protein Rx2, partial [Columba livia]
Length = 233
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P K+ RR+RT FT QL +LE FEK+HYPDV RE+LA+KV+L E RV+
Sbjct: 34 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQ 83
>gi|310893853|gb|ADP37890.1| paired-domain transcription factor Pax3/7-A [Lethenteron
camtschaticum]
Length = 507
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 20 GYMTHAAATIAAMAASQHSAP--PPKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLRE 76
G + A + ++ S P P KRK RR RT FT EQLE+LE FE+THYPD+ RE
Sbjct: 184 GILGDKAGSTVEDSSDVDSEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 243
Query: 77 QLALKVDLKEERVE 90
+LA + L E RV+
Sbjct: 244 ELAQRTKLTEARVQ 257
>gi|117650669|gb|ABK54280.1| Pax3/7 [Branchiostoma belcheri]
Length = 470
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 35 SQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
S+ P +++RR RT FT EQLE+LE FE+THYPD+ RE+LA + L E RV+
Sbjct: 184 SEPDLPLKRKQRRSRTTFTPEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQ 239
>gi|195029473|ref|XP_001987597.1| GH19875 [Drosophila grimshawi]
gi|193903597|gb|EDW02464.1| GH19875 [Drosophila grimshawi]
Length = 395
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 35/49 (71%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P++ RR RT FT QL QLE FEKT YPDV RE LA+++DL E RV+
Sbjct: 147 PRKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQ 195
>gi|124054606|gb|ABM89504.1| Phox2b [Scyliorhinus canicula]
Length = 230
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR RT FT QL++LE F +THYPD+ RE+LALK+DL E RV+
Sbjct: 59 RKQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 106
>gi|350406123|ref|XP_003487663.1| PREDICTED: homeobox protein orthopedia-like [Bombus impatiens]
Length = 352
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/49 (53%), Positives = 37/49 (75%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P +++RHRT FT QL +LE F +THYPD+ LRE++A+K+ L E RV+
Sbjct: 75 PAKQKRHRTRFTPAQLNELERCFNRTHYPDIFLREEIAVKIGLTESRVQ 123
>gi|345485123|ref|XP_003425198.1| PREDICTED: hypothetical protein LOC100680462 [Nasonia vitripennis]
Length = 309
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 35/49 (71%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P++ RR RT FT QL QLE FEKT YPDV RE+LA+ +DL E RV+
Sbjct: 59 PRKVRRSRTTFTTYQLHQLERAFEKTQYPDVFTREELAMSLDLSEARVQ 107
>gi|340709858|ref|XP_003393517.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein orthopedia-like
[Bombus terrestris]
Length = 352
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/49 (53%), Positives = 37/49 (75%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P +++RHRT FT QL +LE F +THYPD+ LRE++A+K+ L E RV+
Sbjct: 75 PAKQKRHRTRFTPAQLNELERCFNRTHYPDIFLREEIAVKIGLTESRVQ 123
>gi|453232439|ref|NP_001263845.1| Protein UNC-42, isoform b [Caenorhabditis elegans]
gi|442535478|emb|CCQ25677.1| Protein UNC-42, isoform b [Caenorhabditis elegans]
Length = 279
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 37/46 (80%)
Query: 45 KRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RRHRT FT+EQL++L+A F+K+HYPD+ +RE+LA L E R++
Sbjct: 100 RRRHRTTFTQEQLQELDAAFQKSHYPDIYVREELARITKLNEARIQ 145
>gi|348576814|ref|XP_003474181.1| PREDICTED: retinal homeobox protein Rx-like [Cavia porcellus]
Length = 529
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 19 PGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQL 78
PG AA A ++ + P K+ RR+RT FT QL +LE FEK+HYPDV RE+L
Sbjct: 113 PGLPVGPAAGDAKLSEEEQ---PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREEL 169
Query: 79 ALKVDLKEERVE 90
A KV+L E RV+
Sbjct: 170 AGKVNLPEVRVQ 181
>gi|195153954|ref|XP_002017888.1| GL17416 [Drosophila persimilis]
gi|194113684|gb|EDW35727.1| GL17416 [Drosophila persimilis]
Length = 401
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 35/49 (71%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P++ RR RT FT QL QLE FEKT YPDV RE LA+++DL E RV+
Sbjct: 139 PRKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQ 187
>gi|284026526|gb|ADB66163.1| Otx-like protein 1 [Aurelia sp. 1 NN-2010a]
Length = 104
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT+ QLE LE F KTHYPD+ +RE++A K++L E RV+
Sbjct: 40 PRKQRRERTTFTKAQLEILEDLFSKTHYPDIFMREEVARKINLPESRVQ 88
>gi|326932470|ref|XP_003212340.1| PREDICTED: paired box protein Pax-7, partial [Meleagris
gallopavo]
Length = 330
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR RT FT EQLE+LE FE+THYPD+ RE+LA + L E RV+
Sbjct: 19 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQ 66
>gi|198458256|ref|XP_001360971.2| GA10035 [Drosophila pseudoobscura pseudoobscura]
gi|198136277|gb|EAL25547.2| GA10035 [Drosophila pseudoobscura pseudoobscura]
Length = 921
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
K+ RR+RT FT QL +LE FEK+HYPDV RE+LA+KV+L E RV+
Sbjct: 559 KKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQ 606
>gi|432860293|ref|XP_004069487.1| PREDICTED: paired box protein Pax-6-like [Oryzias latipes]
Length = 433
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 43 KRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
KRK +R+RT FT++Q+E LE FE+THYPDV RE+LA K+DL E R++
Sbjct: 223 KRKLQRNRTSFTQDQIEALEKEFERTHYPDVFARERLANKIDLPEARIQ 271
>gi|270008150|gb|EFA04598.1| aristaless [Tribolium castaneum]
Length = 182
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 42 PKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PKRK RR+RT FT QLE+LE F +THYPDV RE+LA+K+ L E R++
Sbjct: 62 PKRKQRRYRTTFTSYQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQ 111
>gi|195401625|ref|XP_002059413.1| GJ18584 [Drosophila virilis]
gi|194142419|gb|EDW58825.1| GJ18584 [Drosophila virilis]
Length = 405
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 35/49 (71%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P++ RR RT FT QL QLE FEKT YPDV RE LA+++DL E RV+
Sbjct: 152 PRKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQ 200
>gi|260831720|ref|XP_002610806.1| paired box protein [Branchiostoma floridae]
gi|229296175|gb|EEN66816.1| paired box protein [Branchiostoma floridae]
Length = 464
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 41 PPKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P KRK RR RT FT EQLE+LE FE+THYPD+ RE+LA + L E RV+
Sbjct: 184 PLKRKQRRSRTTFTPEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQ 234
>gi|168479562|dbj|BAG11537.1| paired-box protein 3/7 [Eptatretus burgeri]
Length = 451
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 20 GYMTHAAATIAAMAASQHSAP--PPKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLRE 76
G + A + ++ S P P KRK RR RT FT EQLE+LE FE+THYPD+ RE
Sbjct: 132 GILGEKAGSTVDDSSDIDSEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 191
Query: 77 QLALKVDLKEERVE 90
+LA + L E RV+
Sbjct: 192 ELAQRTKLTEARVQ 205
>gi|9621907|gb|AAF89581.1|AF165886_1 paired-box transcription factor [Branchiostoma floridae]
Length = 464
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 41 PPKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P KRK RR RT FT EQLE+LE FE+THYPD+ RE+LA + L E RV+
Sbjct: 184 PLKRKQRRSRTTFTPEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQ 234
>gi|170059587|ref|XP_001865428.1| paired box protein [Culex quinquefasciatus]
gi|167878294|gb|EDS41677.1| paired box protein [Culex quinquefasciatus]
Length = 340
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 36/49 (73%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P++ RR RT FT QL QLE FEKT YPDV RE+LA+++DL E RV+
Sbjct: 126 PRKIRRSRTTFTTFQLHQLERAFEKTQYPDVFTREELAMRLDLSEARVQ 174
>gi|402592915|gb|EJW86842.1| hypothetical protein WUBG_02247 [Wuchereria bancrofti]
Length = 184
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT F ++QL +LEA F K+HYPDV RE+LA K++L E RV+
Sbjct: 70 RKQRRNRTTFNQQQLNELEAAFRKSHYPDVFAREELATKINLPEARVQ 117
>gi|260786572|ref|XP_002588331.1| hypothetical protein BRAFLDRAFT_224472 [Branchiostoma floridae]
gi|229273492|gb|EEN44342.1| hypothetical protein BRAFLDRAFT_224472 [Branchiostoma floridae]
Length = 149
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 4/58 (6%)
Query: 37 HSAPP----PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
H PP +++RR RT FT QL++LE F +THYPD+ RE+LALK+DL E RV+
Sbjct: 88 HDGPPGLHEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 145
>gi|198458250|ref|XP_001360969.2| GA17327 [Drosophila pseudoobscura pseudoobscura]
gi|198136274|gb|EAL25545.2| GA17327 [Drosophila pseudoobscura pseudoobscura]
Length = 404
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 35/49 (71%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P++ RR RT FT QL QLE FEKT YPDV RE LA+++DL E RV+
Sbjct: 142 PRKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQ 190
>gi|56694814|gb|AAW23069.1| Otx-a [Oikopleura dioica]
Length = 351
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 38/50 (76%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P +++RR RT FT QL+ LE+ F KT YPD+ +RE++ALK++L E RV+
Sbjct: 70 PSRKQRRERTTFTRAQLDILESLFGKTRYPDIFMREEVALKINLPESRVQ 119
>gi|2842529|dbj|BAA24679.1| otx/orthodenticle related homeoprotein [Halocynthia roretzi]
Length = 421
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR RT FT QL+ LEA F KT YPD+ +RE++ALK++L E RV+
Sbjct: 61 RKQRRERTTFTRAQLDILEALFAKTRYPDIFMREEVALKINLPESRVQ 108
>gi|348540080|ref|XP_003457516.1| PREDICTED: visual system homeobox 1-like [Oreochromis niloticus]
Length = 306
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/48 (56%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F++ HYPDV RE LA+K +L E+R++
Sbjct: 97 RKKRRHRTVFTSHQLEELEKAFQEAHYPDVYAREMLAMKTELPEDRIQ 144
>gi|109288051|gb|ABG29069.1| transcription factor Pax6 [Pleurodeles waltl]
Length = 214
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 43 KRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
KRK +R+RT FT+EQ+E LE FE+THYPDV RE+LA K+DL E R++
Sbjct: 153 KRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ 201
>gi|374277734|gb|AEZ03833.1| homeobrain [Terebratalia transversa]
Length = 323
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 36/49 (73%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P++ RR RT FT QL QLE FEK+ YPDV RE+LA+++DL E RV+
Sbjct: 136 PRKIRRSRTTFTTFQLHQLERAFEKSQYPDVFSREELAMRLDLSEARVQ 184
>gi|3204116|emb|CAA11367.1| Pax6 [Branchiostoma floridae]
Length = 462
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 43 KRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
KRK +R+R+ FT+EQ+E LE FE+THYPDV RE+LA K+DL E R++
Sbjct: 247 KRKLQRNRSSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ 295
>gi|15625548|gb|AAL04156.1|AF411465_1 transcription factor Pax7 [Petromyzon marinus]
Length = 505
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 20 GYMTHAAATIAAMAASQHSAP--PPKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLRE 76
G + A + ++ S P P KRK RR RT FT EQLE+LE FE+THYPD+ RE
Sbjct: 182 GILGDKAGSTVEDSSDVDSEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 241
Query: 77 QLALKVDLKEERVE 90
+LA + L E RV+
Sbjct: 242 ELAQRTKLTEARVQ 255
>gi|308484290|ref|XP_003104345.1| CRE-UNC-42 protein [Caenorhabditis remanei]
gi|308257993|gb|EFP01946.1| CRE-UNC-42 protein [Caenorhabditis remanei]
Length = 267
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 37/46 (80%)
Query: 45 KRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RRHRT FT+EQL++L+A F+K+HYPD+ +RE+LA L E R++
Sbjct: 87 RRRHRTTFTQEQLQELDAAFQKSHYPDIYVREELARITKLNEARIQ 132
>gi|74837540|sp|Q6SZ65.1|OTP_LYTVA RecName: Full=Homeobox protein orthopedia
gi|38325836|gb|AAR17090.1| orthopedia [Lytechinus variegatus]
Length = 360
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 41/58 (70%)
Query: 33 AASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+AS + P +++RHRT FT QL +LE F KTHYPD+ +RE++A++V L E RV+
Sbjct: 100 SASGNDDDKPAKQKRHRTRFTPAQLNELERNFAKTHYPDIFMREEIAMRVGLTESRVQ 157
>gi|4505619|ref|NP_002575.1| paired box protein Pax-7 isoform 1 [Homo sapiens]
gi|8247951|sp|P23759.3|PAX7_HUMAN RecName: Full=Paired box protein Pax-7; AltName: Full=HuP1
gi|2570015|emb|CAA65522.1| PAX7 [Homo sapiens]
gi|2570021|emb|CAA65520.1| paired box containing transcription factor [Homo sapiens]
gi|119615261|gb|EAW94855.1| paired box gene 7, isoform CRA_c [Homo sapiens]
Length = 520
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR RT FT EQLE+LE FE+THYPD+ RE+LA + L E RV+
Sbjct: 215 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQ 262
>gi|224047324|ref|XP_002195530.1| PREDICTED: visual system homeobox 1 [Taeniopygia guttata]
Length = 260
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRT+FT QLE+LE F + HYPDV RE LA+K +L E+R++
Sbjct: 65 RKKRRHRTVFTAHQLEELEKAFNEAHYPDVYAREMLAVKTELPEDRIQ 112
>gi|260824227|ref|XP_002607069.1| hypothetical protein BRAFLDRAFT_68140 [Branchiostoma floridae]
gi|229292415|gb|EEN63079.1| hypothetical protein BRAFLDRAFT_68140 [Branchiostoma floridae]
Length = 398
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR RT FT +QL LE F+KTHYPDVV+RE+LA+ +L E RV+
Sbjct: 24 RKQRRSRTAFTSQQLAALEKCFQKTHYPDVVMRERLAMCTNLPESRVQ 71
>gi|308497260|ref|XP_003110817.1| CRE-CEH-10 protein [Caenorhabditis remanei]
gi|308242697|gb|EFO86649.1| CRE-CEH-10 protein [Caenorhabditis remanei]
Length = 344
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRTIFT+ Q+++LE F+ HYPDV RE LA K +L+E+R++
Sbjct: 135 RKKRRHRTIFTQYQIDELEKAFQDAHYPDVYAREVLAGKTELQEDRIQ 182
>gi|195119468|ref|XP_002004253.1| GI19825 [Drosophila mojavensis]
gi|193909321|gb|EDW08188.1| GI19825 [Drosophila mojavensis]
Length = 411
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 35/49 (71%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P++ RR RT FT QL QLE FEKT YPDV RE LA+++DL E RV+
Sbjct: 161 PRKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQ 209
>gi|86515368|ref|NP_001034513.1| orthodenticle-1 [Tribolium castaneum]
gi|2815244|emb|CAA11500.1| orthodenticle-1 protein [Tribolium castaneum]
gi|270004872|gb|EFA01320.1| ocelliless [Tribolium castaneum]
gi|385281374|gb|AFI57839.1| Tc-otd1 [Cloning vector Tc'endoHSE-Tc'bhsp68::Tc'otd1-hsp68-3'UTR]
Length = 371
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 37/49 (75%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P+++RR RT FT QL+ LE F KT YPD+ +RE++A+K++L E RV+
Sbjct: 124 PRKQRRERTTFTRAQLDLLEGLFAKTRYPDIFMREEVAVKINLPESRVQ 172
>gi|7524359|ref|NP_039236.1| paired box protein Pax-7 isoform 2 [Homo sapiens]
gi|2570014|emb|CAA65521.1| PAX7 [Homo sapiens]
gi|111307751|gb|AAI21166.1| Paired box 7 [Homo sapiens]
gi|111307754|gb|AAI21167.1| Paired box 7 [Homo sapiens]
gi|119615259|gb|EAW94853.1| paired box gene 7, isoform CRA_a [Homo sapiens]
Length = 518
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR RT FT EQLE+LE FE+THYPD+ RE+LA + L E RV+
Sbjct: 213 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQ 260
>gi|24158437|ref|NP_571407.1| paired box 7 isoform 2 [Danio rerio]
gi|2909771|gb|AAC41256.1| transcription factor PAX7D [Danio rerio]
Length = 487
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR RT FT EQLE+LE FE+THYPD+ RE+LA + L E RV+
Sbjct: 218 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQ 265
>gi|268572049|ref|XP_002641221.1| C. briggsae CBR-CEH-10 protein [Caenorhabditis briggsae]
Length = 335
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRRHRTIF++ Q+++LE F++ HYPDV RE LA K +L+E+R++
Sbjct: 136 RKKRRHRTIFSQYQIDELEKAFQEAHYPDVYAREVLAGKTELQEDRIQ 183
>gi|344250397|gb|EGW06501.1| Retinal homeobox protein Rx [Cricetulus griseus]
Length = 197
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 15 PNLYPGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVL 74
P PG AA + + + PP K+ RR+RT FT QL +LE FEK+HYPDV
Sbjct: 91 PRPSPGLPVGPAAGDSKLPEEE---PPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 147
Query: 75 REQLALKVDLKEERVE 90
RE+LA KV+L E RV+
Sbjct: 148 REELAGKVNLPEVRVQ 163
>gi|339249747|ref|XP_003373861.1| retinal homeobox protein Rax [Trichinella spiralis]
gi|316969949|gb|EFV53972.1| retinal homeobox protein Rax [Trichinella spiralis]
Length = 560
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/49 (61%), Positives = 36/49 (73%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P++ RR RT FT QL QLE FEK+ YPDV REQLAL++DL E RV+
Sbjct: 149 PRKIRRSRTTFTTYQLHQLERAFEKSQYPDVFTREQLALRLDLSEARVQ 197
>gi|313227120|emb|CBY22267.1| unnamed protein product [Oikopleura dioica]
Length = 487
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/54 (59%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 38 SAPPPKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
S P KRK RR RT FT EQLE+LE FE+THYPD+ RE+LA + L E RV+
Sbjct: 229 SGQPVKRKQRRSRTTFTAEQLEELEKCFERTHYPDIYTREELAQRTKLTEARVQ 282
>gi|195153960|ref|XP_002017891.1| GL17060 [Drosophila persimilis]
gi|194113687|gb|EDW35730.1| GL17060 [Drosophila persimilis]
Length = 920
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
K+ RR+RT FT QL +LE FEK+HYPDV RE+LA+KV+L E RV+
Sbjct: 558 KKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQ 605
>gi|403263094|ref|XP_003923895.1| PREDICTED: paired mesoderm homeobox protein 2A [Saimiri boliviensis
boliviensis]
Length = 247
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR RT FT QL++LE F +THYPD+ RE+LALK+DL E RV+
Sbjct: 88 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 135
>gi|348555401|ref|XP_003463512.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Cavia
porcellus]
Length = 285
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR RT FT QL++LE F +THYPD+ RE+LALK+DL E RV+
Sbjct: 88 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 135
>gi|397497822|ref|XP_003819703.1| PREDICTED: homeobox protein ESX1 [Pan paniscus]
Length = 376
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 41/50 (82%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PP+RKRR RT FT+ QL++LE F+++ YPDVV RE+LA +++L E+RV+
Sbjct: 135 PPERKRRRRTAFTQFQLQELENFFDESQYPDVVARERLAARLNLTEDRVQ 184
>gi|332861345|ref|XP_001138237.2| PREDICTED: homeobox protein ESX1 [Pan troglodytes]
Length = 394
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 41/50 (82%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PP+RKRR RT FT+ QL++LE F+++ YPDVV RE+LA +++L E+RV+
Sbjct: 135 PPERKRRRRTAFTQFQLQELENFFDESQYPDVVARERLAARLNLTEDRVQ 184
>gi|114554358|ref|XP_513156.2| PREDICTED: paired box protein Pax-7 isoform 2 [Pan troglodytes]
Length = 518
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR RT FT EQLE+LE FE+THYPD+ RE+LA + L E RV+
Sbjct: 213 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQ 260
>gi|380023702|ref|XP_003695652.1| PREDICTED: homeobox protein orthopedia-like [Apis florea]
Length = 388
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/49 (53%), Positives = 37/49 (75%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P +++RHRT FT QL +LE F +THYPD+ LRE++A+K+ L E RV+
Sbjct: 111 PAKQKRHRTRFTPAQLNELERCFNRTHYPDIFLREEIAVKIGLTESRVQ 159
>gi|186680510|gb|ACC86106.1| paired box protein 7 [Sternopygus macrurus]
Length = 507
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 41 PPKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P KRK RR RT FT EQLE+LE FE+THYPD+ RE+LA + L E RV+
Sbjct: 215 PLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQ 265
>gi|402853155|ref|XP_003891265.1| PREDICTED: paired box protein Pax-7 [Papio anubis]
Length = 504
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR RT FT EQLE+LE FE+THYPD+ RE+LA + L E RV+
Sbjct: 214 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQ 261
>gi|126321609|ref|XP_001366025.1| PREDICTED: retinal homeobox protein Rx-like [Monodelphis domestica]
Length = 350
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P K+ RR+RT FT QL +LE FEK+HYPDV RE+LA+KV+L E RV+
Sbjct: 132 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAVKVNLPEVRVQ 181
>gi|109131769|ref|XP_001092145.1| PREDICTED: homeobox protein ESX1 [Macaca mulatta]
gi|355705037|gb|EHH30962.1| hypothetical protein EGK_20785 [Macaca mulatta]
Length = 361
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 40/50 (80%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
PP+RKRR RT FT+ QL++LE F++ YPDVV RE+LA +++L E+RV+
Sbjct: 135 PPERKRRRRTAFTQFQLQELENFFDEAQYPDVVARERLAARLNLTEDRVQ 184
>gi|395511533|ref|XP_003760013.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx
[Sarcophilus harrisii]
Length = 319
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P K+ RR+RT FT QL +LE FEK+HYPDV RE+LA+KV+L E RV+
Sbjct: 132 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAVKVNLPEVRVQ 181
>gi|391335338|ref|XP_003742051.1| PREDICTED: uncharacterized protein LOC100905672 [Metaseiulus
occidentalis]
Length = 242
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 45/70 (64%)
Query: 21 YMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLAL 80
+ T +A + AA A +++RR RT FT QLE LE+ F KT YPDV +RE++A+
Sbjct: 5 WFTSSANALNGSAAMAGIAGGIRKQRRERTTFTRPQLELLESLFLKTRYPDVFMREEVAM 64
Query: 81 KVDLKEERVE 90
K++L E RV+
Sbjct: 65 KINLPESRVQ 74
>gi|149035327|gb|EDL90031.1| paired-like homeobox 2b (predicted) [Rattus norvegicus]
Length = 294
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 13/100 (13%)
Query: 1 MRIATGASMVAVAYPNLYPGYMT------HAAATIAAMA---ASQHSAPPPKRK-RRHRT 50
+R GA+ P+L PG + H ++ AA+ + H KRK RR RT
Sbjct: 47 IRTTFGAT---SGCPSLTPGSCSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRT 103
Query: 51 IFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
FT QL++LE F +THYPD+ RE+LALK+DL E RV+
Sbjct: 104 TFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQ 143
>gi|41615484|tpg|DAA03500.1| TPA_inf: HDC00631 [Drosophila melanogaster]
Length = 130
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE+LE F +THYPDV RE LA+K++L E RV+
Sbjct: 67 RKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQ 114
>gi|281485130|gb|ADA70355.1| paired-like family homeodomain transcription factor [Heliconius
erato]
Length = 259
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Query: 15 PNLYPGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVL 74
P+L P HA + + P +++RR+RT FT QL++LE F +THYPDV
Sbjct: 12 PDLSP----HAPDRPGSGSGMDDEDIPRRKQRRYRTTFTSYQLDELEKAFGRTHYPDVFT 67
Query: 75 REQLALKVDLKEERVE 90
RE+LALK+ L E R++
Sbjct: 68 REELALKIGLTEARIQ 83
>gi|268559266|ref|XP_002637624.1| C. briggsae CBR-UNC-42 protein [Caenorhabditis briggsae]
Length = 274
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 37/46 (80%)
Query: 45 KRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+RRHRT FT+EQL++L+A F+K+HYPD+ +RE+LA L E R++
Sbjct: 95 RRRHRTTFTQEQLQELDAAFQKSHYPDIYVREELARITKLNEARIQ 140
>gi|397473637|ref|XP_003808312.1| PREDICTED: homeobox protein aristaless-like 4 [Pan paniscus]
Length = 424
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+KRR+RT FT QLE+LE F+KTHYPDV REQLA++ DL E RV+
Sbjct: 226 KKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQ 272
>gi|326925807|ref|XP_003209100.1| PREDICTED: paired box protein Pax-3-like [Meleagris gallopavo]
Length = 304
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR RT FT EQLE+LE FE+THYPD+ RE+LA + L E RV+
Sbjct: 62 RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQ 109
>gi|157122925|ref|XP_001659959.1| paired box protein, putative [Aedes aegypti]
gi|108882959|gb|EAT47184.1| AAEL001696-PA [Aedes aegypti]
Length = 289
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 39/64 (60%)
Query: 27 ATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKE 86
+ M + P++ RR RT FT QL QLE FEKT YPDV RE+LA+++DL E
Sbjct: 78 GDLDGMDGDPNDMNRPRKIRRSRTTFTTFQLHQLERAFEKTQYPDVFTREELAMRLDLSE 137
Query: 87 ERVE 90
RV+
Sbjct: 138 ARVQ 141
>gi|41581183|emb|CAF02091.1| paired box protein 7 [Salmo salar]
Length = 514
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 41 PPKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P KRK RR RT FT EQLE+LE FE+THYPD+ RE+LA + L E RV+
Sbjct: 223 PLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQ 273
>gi|403287533|ref|XP_003934998.1| PREDICTED: paired box protein Pax-7 [Saimiri boliviensis
boliviensis]
Length = 502
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR RT FT EQLE+LE FE+THYPD+ RE+LA + L E RV+
Sbjct: 215 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQ 262
>gi|148668013|gb|EDL00430.1| paired box gene 3 [Mus musculus]
Length = 284
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR RT FT EQLE+LE FE+THYPD+ RE+LA + L E RV+
Sbjct: 22 RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQ 69
>gi|2136302|pir||A45452 transcription factor PAX3 - human (fragments)
Length = 326
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR RT FT EQLE+LE FE+THYPD+ RE+LA + L E RV+
Sbjct: 64 RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQ 111
>gi|24158435|ref|NP_571400.1| paired box 7 isoform 1 [Danio rerio]
gi|2909769|gb|AAC41255.1| transcription factor PAX7C [Danio rerio]
gi|122891363|emb|CAM12909.1| paired box gene 7 [Danio rerio]
gi|190337573|gb|AAI63502.1| Paired box gene 7a [Danio rerio]
gi|190337587|gb|AAI63523.1| Paired box gene 7a [Danio rerio]
Length = 507
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 41 PPKRK-RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
P KRK RR RT FT EQLE+LE FE+THYPD+ RE+LA + L E RV+
Sbjct: 215 PLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQ 265
>gi|395820301|ref|XP_003783508.1| PREDICTED: intestine-specific homeobox [Otolemur garnettii]
Length = 292
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 24 HAAATIAAMAASQHSAPPPKRK--RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALK 81
HAAA A + + PP +RK RR RT FT EQL++LE F THYPDV R QLA +
Sbjct: 106 HAAAAGARLERTVQDQPPEERKSKRRVRTTFTSEQLQELERIFHFTHYPDVHTRSQLAAR 165
Query: 82 VDLKEERVE 90
++L E RV+
Sbjct: 166 INLPEARVQ 174
>gi|348507210|ref|XP_003441149.1| PREDICTED: dorsal root ganglia homeobox protein-like [Oreochromis
niloticus]
Length = 308
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 40 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 87
>gi|426328067|ref|XP_004024824.1| PREDICTED: paired box protein Pax-7 isoform 1 [Gorilla gorilla
gorilla]
Length = 518
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR RT FT EQLE+LE FE+THYPD+ RE+LA + L E RV+
Sbjct: 213 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQ 260
>gi|332017817|gb|EGI58478.1| Homeobox protein ARX [Acromyrmex echinatior]
Length = 248
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 3 IATGASMVAVAYPNLYPGYMTHAAATIAAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEA 62
+ GA +V +P T+ +T +++RR+RT F+ QLE+LE
Sbjct: 58 LIDGAQFTSVCFP----AKFTYDFSTGPESEERPSCVIGKRKQRRYRTTFSNFQLEELER 113
Query: 63 TFEKTHYPDVVLREQLALKVDLKEERVE 90
F+KTHYPDV RE+LA+++ L E RV+
Sbjct: 114 AFQKTHYPDVFFREELAVRIQLTEARVQ 141
>gi|307195645|gb|EFN77487.1| Homeobox protein ARX [Harpegnathos saltator]
Length = 271
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT F+ QLE+LE F+KTHYPDV RE+LA+++ L E RV+
Sbjct: 94 RKQRRYRTTFSNFQLEELERAFQKTHYPDVFFREELAVRIQLTEARVQ 141
>gi|291412928|ref|XP_002722729.1| PREDICTED: orthopedia homeobox [Oryctolagus cuniculus]
Length = 259
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 34/44 (77%)
Query: 47 RHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
RHRT FT QL +LE +F KTHYPD+ +RE+LAL++ L E RV+
Sbjct: 106 RHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQ 149
>gi|195147184|ref|XP_002014560.1| GL18888 [Drosophila persimilis]
gi|198473726|ref|XP_001356418.2| GA15474 [Drosophila pseudoobscura pseudoobscura]
gi|194106513|gb|EDW28556.1| GL18888 [Drosophila persimilis]
gi|198138081|gb|EAL33482.2| GA15474 [Drosophila pseudoobscura pseudoobscura]
Length = 376
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT F QL++LE F++THYPDV RE+LA+++DL E RV+
Sbjct: 3 RKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQ 50
>gi|190337325|gb|AAI62791.1| Dorsal root ganglia homeobox [Danio rerio]
gi|190340175|gb|AAI62787.1| Dorsal root ganglia homeobox [Danio rerio]
Length = 287
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT +QLE LEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 40 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQ 87
>gi|555819|gb|AAA80574.1| paired box homeotic protein [Homo sapiens]
Length = 283
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR RT FT EQLE+LE FE+THYPD+ RE+LA + L E RV+
Sbjct: 21 RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQ 68
>gi|260787658|ref|XP_002588869.1| hypothetical protein BRAFLDRAFT_235895 [Branchiostoma floridae]
gi|229274040|gb|EEN44880.1| hypothetical protein BRAFLDRAFT_235895 [Branchiostoma floridae]
Length = 76
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 39/48 (81%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT FT QLEQLEA F +THYPDV RE+LA+K++L E RV+
Sbjct: 7 RKQRRNRTTFTLHQLEQLEAVFAQTHYPDVFTREELAMKINLTEARVQ 54
>gi|395731076|ref|XP_003775838.1| PREDICTED: paired box protein Pax-7 isoform 2 [Pongo abelii]
Length = 518
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR RT FT EQLE+LE FE+THYPD+ RE+LA + L E RV+
Sbjct: 213 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQ 260
>gi|307175916|gb|EFN65729.1| Homeobox protein ARX [Camponotus floridanus]
Length = 249
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
+++RR+RT F+ QLE+LE F+KTHYPDV RE+LA+++ L E RV+
Sbjct: 95 RKQRRYRTTFSNFQLEELERAFQKTHYPDVFFREELAVRIQLTEARVQ 142
>gi|313475156|dbj|BAJ41033.1| aristaless-like transcription factor [Scaphechinus mirabilis]
Length = 463
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/48 (60%), Positives = 38/48 (79%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++KRR+RT FT QLE++E F++THYPDV REQLAL+ DL E RV+
Sbjct: 134 RKKRRNRTTFTSYQLEEMEKVFQRTHYPDVYCREQLALRCDLTEARVQ 181
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.128 0.359
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,359,749,564
Number of Sequences: 23463169
Number of extensions: 43065630
Number of successful extensions: 192721
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6507
Number of HSP's successfully gapped in prelim test: 412
Number of HSP's that attempted gapping in prelim test: 185727
Number of HSP's gapped (non-prelim): 7322
length of query: 91
length of database: 8,064,228,071
effective HSP length: 61
effective length of query: 30
effective length of database: 6,632,974,762
effective search space: 198989242860
effective search space used: 198989242860
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)