RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy7434
(91 letters)
>d1pufa_ a.4.1.1 (A:) Homeobox protein hox-a9 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 77
Score = 59.5 bits (144), Expect = 4e-14
Identities = 13/52 (25%), Positives = 24/52 (46%)
Query: 38 SAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERV 89
+ + R+ R +T+ Q +LE F Y R ++A ++L E +V
Sbjct: 6 NWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQV 57
>d2cuea1 a.4.1.1 (A:7-74) Paired box protein pax6 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 68
Score = 57.1 bits (138), Expect = 3e-13
Identities = 27/44 (61%), Positives = 35/44 (79%)
Query: 46 RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERV 89
+R+RT FT+EQ+E LE FE+THYPDV RE+LA K+DL E R+
Sbjct: 2 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARI 45
>d1fjla_ a.4.1.1 (A:) Paired protein {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 65
Score = 54.5 bits (131), Expect = 3e-12
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
++RR RT F+ QL++LE FE+T YPD+ RE+LA + +L E R++
Sbjct: 1 KQRRSRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQ 47
>d1bw5a_ a.4.1.1 (A:) Insulin gene enhancer protein isl-1 {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 66
Score = 52.9 bits (127), Expect = 1e-11
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 44 RKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERV 89
+ R RT+ E+QL L + PD +++EQL L +
Sbjct: 2 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 47
>d2cufa1 a.4.1.1 (A:8-89) Homeobox-containing protein 1, HMBOX1
(Flj21616) {Human (Homo sapiens) [TaxId: 9606]}
Length = 82
Score = 53.1 bits (127), Expect = 1e-11
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 46 RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERV 89
R R + +E L +E+ F + YPD RE++A + ++
Sbjct: 1 RGSRFTWRKECLAVMESYFNENQYPDEAKREEIANACNAVIQKP 44
>d1b72a_ a.4.1.1 (A:) Homeobox protein hox-b1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 88
Score = 52.7 bits (126), Expect = 2e-11
Identities = 17/55 (30%), Positives = 25/55 (45%)
Query: 35 SQHSAPPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERV 89
++ S P RT FT QL +LE F Y R ++A ++L E +V
Sbjct: 17 AKVSEPGLGSPSGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQV 71
>d9anta_ a.4.1.1 (A:) Antennapedia Homeodomain {Drosophila
melanogaster [TaxId: 7227]}
Length = 56
Score = 51.7 bits (124), Expect = 3e-11
Identities = 11/41 (26%), Positives = 18/41 (43%)
Query: 49 RTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERV 89
R +T Q +LE F Y R ++A + L E ++
Sbjct: 1 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALSLTERQI 41
>d2e1oa1 a.4.1.1 (A:8-64) Homeobox protein prh {Human (Homo
sapiens) [TaxId: 9606]}
Length = 57
Score = 51.4 bits (123), Expect = 3e-11
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 46 RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERV 89
+ + F+ +Q +LE FE Y R++LA + L E +V
Sbjct: 1 KGGQVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQV 44
>d2craa1 a.4.1.1 (A:7-64) Homeobox protein hox-b13 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 58
Score = 51.0 bits (122), Expect = 4e-11
Identities = 9/44 (20%), Positives = 21/44 (47%)
Query: 46 RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERV 89
R+ R +++ QL +LE + + R +++ L E ++
Sbjct: 2 RKKRIPYSKGQLRELEREYAANKFITKDKRRKISAATSLSERQI 45
>d1vnda_ a.4.1.1 (A:) VND/NK-2 protein {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 77
Score = 51.6 bits (123), Expect = 4e-11
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERV 89
P +KR+ R +FT+ Q +LE F + Y RE LA + L +V
Sbjct: 5 LPNKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQV 53
>d1p7ia_ a.4.1.1 (A:) Engrailed Homeodomain {Drosophila
melanogaster [TaxId: 7227]}
Length = 53
Score = 51.0 bits (122), Expect = 5e-11
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 47 RHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERV 89
R RT F+ EQL +L+ F + Y R+QL+ ++ L E ++
Sbjct: 1 RPRTAFSSEQLARLKREFNENRYLTERRRQQLSSELGLNEAQI 43
>d1wh7a_ a.4.1.1 (A:) ZF-HD homeobox protein At4g24660 {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 80
Score = 50.4 bits (120), Expect = 1e-10
Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Query: 33 AASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEK----THYPDVVLREQLALKVDLKEER 88
++ + + +R RT FT EQ E++ A E+ D V EQ + ++ +
Sbjct: 5 SSGSNPSSSGGTTKRFRTKFTAEQKEKMLAFAERLGWRIQKHDDVAVEQFCAETGVRRQV 64
Query: 89 V 89
+
Sbjct: 65 L 65
>d1s7ea1 a.4.1.1 (A:103-152) Hepatocyte nuclear factor 6 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 50
Score = 49.5 bits (118), Expect = 2e-10
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 49 RTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERV 89
R +FT+ Q L A F++ P L+ ++ ++ L+ V
Sbjct: 2 RLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLELSTV 42
>d1yz8p1 a.4.1.1 (P:1-60) Pituitary homeobox 2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 60
Score = 49.6 bits (118), Expect = 2e-10
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 46 RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVE 90
RR RT FT +QL+QLEATF++ YPD+ RE++A+ +L E RV
Sbjct: 2 RRQRTHFTSQQLQQLEATFQRNRYPDMSTREEIAVWTNLTEARVR 46
>d1jgga_ a.4.1.1 (A:) Even-skipped homeodomain {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 57
Score = 49.1 bits (117), Expect = 3e-10
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 47 RHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERV 89
R+RT FT +QL +LE F K +Y R +LA +++L E +
Sbjct: 1 RYRTAFTRDQLGRLEKEFYKENYVSRPRRCELAAQLNLPESTI 43
>d1ig7a_ a.4.1.1 (A:) Msx-1 homeodomain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 58
Score = 48.8 bits (116), Expect = 3e-10
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 46 RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERV 89
R+ RT FT QL LE F + Y + R + + + L E +V
Sbjct: 1 RKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQV 44
>d1ftta_ a.4.1.1 (A:) Thyroid transcription factor 1 homeodomain
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 68
Score = 48.4 bits (115), Expect = 6e-10
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 45 KRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERV 89
+R+ R +F++ Q+ +LE F++ Y RE LA + L +V
Sbjct: 2 RRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQV 46
>d1au7a1 a.4.1.1 (A:103-160) Pit-1 POU homeodomain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 58
Score = 48.0 bits (114), Expect = 6e-10
Identities = 10/43 (23%), Positives = 21/43 (48%)
Query: 47 RHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERV 89
+ RT + + LE F + P ++A +++L++E V
Sbjct: 1 KRRTTISIAAKDALERHFGEHSKPSSQEIMRMAEELNLEKEVV 43
>d1zq3p1 a.4.1.1 (P:2-68) Homeotic bicoid protein {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 67
Score = 47.2 bits (112), Expect = 2e-09
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 46 RRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERV 89
RR RT FT Q+ +LE F + Y L+ K+ L +V
Sbjct: 2 RRTRTTFTSSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQV 45
>d1le8a_ a.4.1.1 (A:) Mating type protein A1 Homeodomain {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 53
Score = 46.0 bits (109), Expect = 4e-09
Identities = 7/41 (17%), Positives = 18/41 (43%)
Query: 49 RTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERV 89
++ + + LE F + + +E++A K + +V
Sbjct: 1 KSSISPQARAFLEQVFRRKQSLNSKEKEEVAKKCGITPLQV 41
>d1x2na1 a.4.1.1 (A:6-67) Homeobox protein pknox1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 62
Score = 46.3 bits (110), Expect = 4e-09
Identities = 7/48 (14%), Positives = 19/48 (39%), Gaps = 3/48 (6%)
Query: 45 KRRHRTIFTEEQLEQLEATFEKTH---YPDVVLREQLALKVDLKEERV 89
+ R + + + + + YP ++Q+A + +L +V
Sbjct: 2 GKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQV 49
>d1ocpa_ a.4.1.1 (A:) Oct-3 POU Homeodomain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 67
Score = 46.2 bits (109), Expect = 5e-09
Identities = 11/47 (23%), Positives = 21/47 (44%)
Query: 43 KRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERV 89
+ ++R RT LE F K P + +A ++ L+++ V
Sbjct: 6 QARKRKRTSIENRVRWSLETMFLKCPKPSLQQITHIANQLGLEKDVV 52
>d1lfba_ a.4.1.1 (A:) Hepatocyte nuclear factor 1a (LFB1/HNF1)
{Rat (Rattus rattus) [TaxId: 10117]}
Length = 78
Score = 43.6 bits (102), Expect = 6e-08
Identities = 8/43 (18%), Positives = 14/43 (32%)
Query: 49 RTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVEP 91
R + + L +E+ P RE L + + E
Sbjct: 1 RFKWGPASQQILFQAYERQKNPSKEERETLVEECNRAECIQRG 43
>d1wi3a_ a.4.1.1 (A:) DNA-binding protein SATB2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 71
Score = 43.5 bits (102), Expect = 6e-08
Identities = 12/49 (24%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKT-HYPDVVLREQLALKVDLKEERV 89
R RT + E L L++ YPD L+ ++DL + +
Sbjct: 4 GSSGPRSRTKISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTI 52
>d1k61a_ a.4.1.1 (A:) mat alpha2 Homeodomain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 60
Score = 42.8 bits (101), Expect = 7e-08
Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 5/47 (10%)
Query: 46 RRHRTIFTEEQLEQLEATFEK---THYPDVVLREQLALKVDLKEERV 89
R HR FT+E + LE+ F K Y D E L L ++
Sbjct: 1 RGHR--FTKENVRILESWFAKNIENPYLDTKGLENLMKNTSLSRIQI 45
>d1uhsa_ a.4.1.1 (A:) Homeodomain-only protein, Hop {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 72
Score = 43.1 bits (101), Expect = 1e-07
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Query: 46 RRHRTIFTEEQLEQLEATFEKT-HYPDVVLREQLALKVDLKEERV 89
TE+Q+E LE F K +PD +A + L EE+
Sbjct: 2 SEGAATMTEDQVEILEYNFNKVNKHPDPTTLCLIAAEAGLTEEQT 46
>d1pufb_ a.4.1.1 (B:) pbx1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 73
Score = 43.0 bits (101), Expect = 1e-07
Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
Query: 46 RRHRTIFTEEQLEQLEATFE---KTHYPDVVLREQLALKVDLKEERV 89
RR R F ++ E L F YP +E+LA K + +V
Sbjct: 2 RRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQV 48
>d2cqxa1 a.4.1.1 (A:8-66) LAG1 longevity assurance homolog 5,
LASS5 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 59
Score = 41.3 bits (97), Expect = 3e-07
Identities = 10/44 (22%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 47 RHRTIFTEEQLEQLEATFEK-THYPDVVLREQLALKVDLKEERV 89
+ + E + LE F T YPD + L+ ++D ++
Sbjct: 3 KDSPVNKVEPNDTLEKVFVSVTKYPDEKRLKGLSKQLDWSVRKI 46
>d1x2ma1 a.4.1.1 (A:8-59) Lag1 longevity assurance homolog 6,
LASS6 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 52
Score = 39.3 bits (92), Expect = 2e-06
Identities = 10/39 (25%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Query: 53 TEEQLEQLEATFEK-THYPDVVLREQLALKVDLKEERVE 90
T + LE F T +PD E L+ ++D ++
Sbjct: 1 TAQPNAILEKVFTAITKHPDEKRLEGLSKQLDWDVRSIQ 39
>d1e3oc1 a.4.1.1 (C:104-160) Oct-1 POU Homeodomain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 57
Score = 39.1 bits (91), Expect = 2e-06
Identities = 8/41 (19%), Positives = 18/41 (43%)
Query: 49 RTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERV 89
RT LE +F + P +A ++++++E +
Sbjct: 2 RTSIETNIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVI 42
>d2ecba1 a.4.1.1 (A:8-83) Zinc fingers and homeoboxes protein 1,
ZHX1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 76
Score = 34.3 bits (78), Expect = 2e-04
Identities = 10/50 (20%), Positives = 18/50 (36%), Gaps = 2/50 (4%)
Query: 40 PPPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERV 89
P ++ T EQL L+A+F + +L + L +
Sbjct: 1 PDFTPQKFKE--KTAEQLRVLQASFLNSSVLTDEELNRLRAQTKLTRREI 48
>d2ecca1 a.4.1.1 (A:1-76) Homeobox-leucine zipper protein Homez
{Human (Homo sapiens) [TaxId: 9606]}
Length = 76
Score = 31.2 bits (70), Expect = 0.003
Identities = 9/48 (18%), Positives = 18/48 (37%), Gaps = 4/48 (8%)
Query: 42 PKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERV 89
+R T+EQL L++ F + + ++L L +
Sbjct: 4 GSSGKR----KTKEQLAILKSFFLQCQWARREDYQKLEQITGLPRPEI 47
>d3ctaa2 b.43.5.2 (A:90-220) CTP-dependent riboflavin kinase, Rfk
{Thermoplasma acidophilum [TaxId: 2303]}
Length = 131
Score = 26.9 bits (60), Expect = 0.27
Identities = 9/24 (37%), Positives = 13/24 (54%), Gaps = 7/24 (29%)
Query: 65 EKTHYPDVV-------LREQLALK 81
E+T Y DV+ LRE++ L
Sbjct: 97 ERTVYTDVIEIISDKYLREEINLH 120
>d1fmja_ c.37.1.5 (A:) Retinol dehydratase {Fall armyworm
(Spodoptera frugiperda) [TaxId: 7108]}
Length = 342
Score = 27.3 bits (59), Expect = 0.27
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 6/30 (20%)
Query: 49 RTIFTEEQLEQLEATFEKT------HYPDV 72
R F EE +Q E + YP++
Sbjct: 313 RDYFDEEMTKQAEKWIKDNLKDTDLRYPNM 342
>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId:
9031]}
Length = 162
Score = 26.1 bits (56), Expect = 0.49
Identities = 9/37 (24%), Positives = 15/37 (40%), Gaps = 9/37 (24%)
Query: 30 AAMAASQHSAPPPKRKRRHRTIFTEEQLEQLEATFEK 66
A+M Q A R +EE + + +A F+
Sbjct: 1 ASMTDQQAEA---------RAFLSEEMIAEFKAAFDM 28
>d1j99a_ c.37.1.5 (A:) Hydroxysteroid sulfotransferase sult2a1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 284
Score = 26.0 bits (56), Expect = 0.64
Identities = 5/18 (27%), Positives = 9/18 (50%)
Query: 49 RTIFTEEQLEQLEATFEK 66
+ FT Q E + F++
Sbjct: 254 KNHFTVAQAEDFDKLFQE 271
>d1q20a_ c.37.1.5 (A:) Cholesterol sulfotransferase sult2b1b {Human
(Homo sapiens) [TaxId: 9606]}
Length = 294
Score = 26.0 bits (56), Expect = 0.65
Identities = 5/18 (27%), Positives = 8/18 (44%)
Query: 49 RTIFTEEQLEQLEATFEK 66
+ FT Q E + + K
Sbjct: 265 KNHFTVAQSEAFDRAYRK 282
>d1ls6a_ c.37.1.5 (A:) Aryl sulfotransferase sult1a {Human (Homo
sapiens) [TaxId: 9606]}
Length = 288
Score = 25.9 bits (56), Expect = 0.66
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 49 RTIFTEEQLEQLEATFEK 66
+T FT Q E+ +A + +
Sbjct: 258 KTTFTVAQNERFDADYAE 275
>d1q44a_ c.37.1.5 (A:) Putative steroid sulfotransferase rarO47
{Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 320
Score = 25.9 bits (56), Expect = 0.67
Identities = 5/18 (27%), Positives = 10/18 (55%)
Query: 49 RTIFTEEQLEQLEATFEK 66
R +E E+++ T E+
Sbjct: 293 RDTLSESLAEEIDRTIEE 310
>d3bfxa1 c.37.1.5 (A:12-296) Sulfotransferase Sult1c2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 285
Score = 25.9 bits (56), Expect = 0.71
Identities = 4/18 (22%), Positives = 9/18 (50%)
Query: 49 RTIFTEEQLEQLEATFEK 66
+ FT Q E+ + + +
Sbjct: 255 KNHFTVAQNERFDEIYRR 272
>d2z5fa_ c.37.1.5 (A:) Thyroid hormone sulfotransferase Sult1b1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 25.9 bits (56), Expect = 0.76
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 49 RTIFTEEQLEQLEATFEK 66
+ FT Q E+ +A +E
Sbjct: 263 KNYFTVAQNEKFDAIYET 280
>d1g3ma_ c.37.1.5 (A:) Estrogen sulfotransferase (STE, sult1e1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 290
Score = 26.0 bits (56), Expect = 0.80
Identities = 4/18 (22%), Positives = 9/18 (50%)
Query: 49 RTIFTEEQLEQLEATFEK 66
+ FT E+ + +E+
Sbjct: 262 KNHFTVALNEKFDKHYEQ 279
>d1p2xa_ a.40.1.1 (A:) Ras GTPase-activating-like protein rng2
{Fission yeast (Schizosaccharomyces pombe) [TaxId:
4896]}
Length = 159
Score = 25.4 bits (55), Expect = 1.1
Identities = 9/40 (22%), Positives = 14/40 (35%), Gaps = 2/40 (5%)
Query: 22 MTHAAATIAAMA--ASQHSAPPPKRKRRHRTIFTEEQLEQ 59
+ I A++ S PP K FT+E +
Sbjct: 102 LPKVIYCIHALSYFLSMQDLAPPLIKSDENLSFTDEDVSI 141
>d1v5na_ g.49.1.3 (A:) Pdi-like hypothetical protein At1g60420
{Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 89
Score = 24.5 bits (53), Expect = 1.3
Identities = 6/17 (35%), Positives = 13/17 (76%)
Query: 52 FTEEQLEQLEATFEKTH 68
TEE+L+++EA +++
Sbjct: 7 GTEERLKEIEAKYDEIA 23
>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 165
Score = 24.7 bits (52), Expect = 1.6
Identities = 4/17 (23%), Positives = 11/17 (64%)
Query: 50 TIFTEEQLEQLEATFEK 66
+ F +++++L F+K
Sbjct: 8 SHFDADEIKRLGKRFKK 24
>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 183
Score = 24.5 bits (52), Expect = 2.2
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 50 TIFTEEQLEQLEATFEK 66
T+F+ ++E L F+K
Sbjct: 9 TVFSVSEIEALYELFKK 25
>gi|148225444|ref|NP_001084009.1|(23-166:170) myosin light chain,
phosphorylatable, fast skeletal muscle [Xenopus laevis]
gi|27371289|gb|AAH41503.1| Mylpf-prov protein
[Xenopus laevis] gi|32450381|gb|AAH53808.1|
Mylpf-prov protein [Xenopus laevis]
gi|45361043|ref|NP_989158.1| myosin, light polypeptide
2, regulatory, cardiac, slow [Xenopus (Silurana)
tropicalis] gi|38494267|gb|AAH61602.1| Fast skeletal
myosin light chain 2 [Xenopus tropicalis]
gi|68342098|gb|AAY90073.1| MLC2 [Xenopus tropicalis]
gi|89272443|emb|CAJ83266.1| fast skeletal myosin light
chain 2 [Xenopus tropicalis] E=1e-68 s/c=1.81 id=86%
cov=100%
Length = 144
Score = 24.1 bits (51), Expect = 2.5
Identities = 3/15 (20%), Positives = 8/15 (53%)
Query: 52 FTEEQLEQLEATFEK 66
F + Q+++ + F
Sbjct: 1 FDQTQIQEFKEAFTV 15
>d1s1da_ b.67.3.1 (A:) Soluble calcium-activated nucleotidase SCAN-1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 317
Score = 24.3 bits (53), Expect = 2.9
Identities = 8/28 (28%), Positives = 11/28 (39%), Gaps = 9/28 (32%)
Query: 1 MRIATGASMVAVAYPNLYPGYMTHAAAT 28
+R A G PGY+ H +A
Sbjct: 185 LRAAAGIQ---------PPGYLIHESAC 203
>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting
protein {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 178
Score = 24.0 bits (51), Expect = 3.4
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 50 TIFTEEQLEQLEATFEKTHYPDVVLREQL 78
T FT+ +L+ L F+ VV E
Sbjct: 8 TNFTKRELQVLYRGFKNECPSGVVNEETF 36
>d1hvca_ b.50.1.1 (A:) Human immunodeficiency virus type 1 protease
{Human immunodeficiency virus type 1 [TaxId: 11676]}
Length = 203
Score = 23.7 bits (52), Expect = 3.4
Identities = 10/36 (27%), Positives = 14/36 (38%)
Query: 41 PPKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLRE 76
P+ R + T + QL+ T D VL E
Sbjct: 104 GPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEE 139
>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 187
Score = 23.6 bits (50), Expect = 3.9
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 47 RHRTIFTEEQLEQLEATFEK 66
+T FTE++++Q F K
Sbjct: 14 TRKTYFTEKEVQQWYKGFIK 33
>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId:
9031]}
Length = 81
Score = 22.6 bits (48), Expect = 6.9
Identities = 5/18 (27%), Positives = 10/18 (55%)
Query: 49 RTIFTEEQLEQLEATFEK 66
R +EE + + +A F+
Sbjct: 5 RAFLSEEMIAEFKAAFDM 22
>g1f8v.1 b.121.4.4 (A:,D:) Alphanodavirus capsid protein
{Pariacoto virus [TaxId: 103782]}
Length = 395
Score = 23.1 bits (49), Expect = 7.4
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 25 AAATIAAMAASQHSAPPPKRKRRHRT 50
+ A + ASQ + P P++ R+
Sbjct: 13 STALVPMAPASQRTGPAPRKPRKRNQ 38
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 888
Score = 23.1 bits (48), Expect = 9.1
Identities = 5/25 (20%), Positives = 13/25 (52%)
Query: 53 TEEQLEQLEATFEKTHYPDVVLREQ 77
E+ L+Q+ +++ PD ++
Sbjct: 6 DEQGLQQILQLLKESQSPDTTIQRT 30
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.128 0.359
Gapped
Lambda K H
0.267 0.0551 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 330,374
Number of extensions: 12855
Number of successful extensions: 135
Number of sequences better than 10.0: 1
Number of HSP's gapped: 129
Number of HSP's successfully gapped: 66
Length of query: 91
Length of database: 2,407,596
Length adjustment: 55
Effective length of query: 36
Effective length of database: 1,652,446
Effective search space: 59488056
Effective search space used: 59488056
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.3 bits)