BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7436
(243 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 233 bits (595), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 124/151 (82%), Positives = 125/151 (82%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 22 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 65
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 66 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 125
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READIDGDGQVNYE EF+TMM K
Sbjct: 126 READIDGDGQVNYE--------EFVTMMTSK 148
Score = 203 bits (517), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 105/139 (75%), Positives = 115/139 (82%), Gaps = 8/139 (5%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG NGT
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG--------NGT 62
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD
Sbjct: 63 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 122
Query: 208 EMIREADIDGDGQVNYEVY 226
EMIREADIDGDGQVNYE +
Sbjct: 123 EMIREADIDGDGQVNYEEF 141
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG+G +++ +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 229 YCVHIMGNT 237
M +T
Sbjct: 71 MMARKMKDT 79
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 233 bits (594), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 124/151 (82%), Positives = 125/151 (82%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 23 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 66
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 67 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 126
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READIDGDGQVNYE EF+TMM K
Sbjct: 127 READIDGDGQVNYE--------EFVTMMTSK 149
Score = 204 bits (519), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 109/150 (72%), Positives = 121/150 (80%), Gaps = 11/150 (7%)
Query: 80 MKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 136
M D +EE+I +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 137 DGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN 196
NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN
Sbjct: 61 --------NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN 112
Query: 197 LGEKLTDEEVDEMIREADIDGDGQVNYEVY 226
LGEKLTDEEVDEMIREADIDGDGQVNYE +
Sbjct: 113 LGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 161 MKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 217
M D +EE+I +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 218 DGQVNYEVYTIYCVHIMGNT 237
+G +++ + M +T
Sbjct: 61 NGTIDFPEFLTMMARKMKDT 80
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 233 bits (594), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 124/151 (82%), Positives = 125/151 (82%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 22 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 65
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 66 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 125
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READIDGDGQVNYE EF+TMM K
Sbjct: 126 READIDGDGQVNYE--------EFVTMMTAK 148
Score = 203 bits (517), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 105/139 (75%), Positives = 115/139 (82%), Gaps = 8/139 (5%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG NGT
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG--------NGT 62
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD
Sbjct: 63 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 122
Query: 208 EMIREADIDGDGQVNYEVY 226
EMIREADIDGDGQVNYE +
Sbjct: 123 EMIREADIDGDGQVNYEEF 141
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG+G +++ +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 229 YCVHIMGNT 237
M +T
Sbjct: 71 MMARKMKDT 79
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 233 bits (593), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 124/151 (82%), Positives = 125/151 (82%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 23 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 66
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 67 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 126
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READIDGDGQVNYE EF+TMM K
Sbjct: 127 READIDGDGQVNYE--------EFVTMMTTK 149
Score = 204 bits (518), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 109/150 (72%), Positives = 121/150 (80%), Gaps = 11/150 (7%)
Query: 80 MKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 136
M D +EE+I +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 137 DGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN 196
NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN
Sbjct: 61 --------NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN 112
Query: 197 LGEKLTDEEVDEMIREADIDGDGQVNYEVY 226
LGEKLTDEEVDEMIREADIDGDGQVNYE +
Sbjct: 113 LGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 161 MKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 217
M D +EE+I +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 218 DGQVNYEVYTIYCVHIMGNT 237
+G +++ + M +T
Sbjct: 61 NGTIDFPEFLTMMARKMKDT 80
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 232 bits (591), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 123/151 (81%), Positives = 125/151 (82%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 23 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 66
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 67 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 126
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
RE+DIDGDGQVNYE EF+TMM K
Sbjct: 127 RESDIDGDGQVNYE--------EFVTMMTSK 149
Score = 203 bits (516), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 108/150 (72%), Positives = 121/150 (80%), Gaps = 11/150 (7%)
Query: 80 MKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 136
M D +EE+I +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 137 DGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN 196
NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN
Sbjct: 61 --------NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN 112
Query: 197 LGEKLTDEEVDEMIREADIDGDGQVNYEVY 226
LGEKLTDEEVDEMIRE+DIDGDGQVNYE +
Sbjct: 113 LGEKLTDEEVDEMIRESDIDGDGQVNYEEF 142
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 161 MKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 217
M D +EE+I +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 218 DGQVNYEVYTIYCVHIMGNT 237
+G +++ + M +T
Sbjct: 61 NGTIDFPEFLTMMARKMKDT 80
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 230 bits (587), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 122/152 (80%), Positives = 125/152 (82%), Gaps = 24/152 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 23 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 66
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 67 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 126
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARKM 161
READIDGDGQVNYE EF+ MM K+
Sbjct: 127 READIDGDGQVNYE--------EFVQMMTAKL 150
Score = 202 bits (515), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 108/150 (72%), Positives = 121/150 (80%), Gaps = 11/150 (7%)
Query: 80 MKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 136
M D +EE+I +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 137 DGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN 196
NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTN
Sbjct: 61 --------NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 112
Query: 197 LGEKLTDEEVDEMIREADIDGDGQVNYEVY 226
LGEKLTDEEVDEMIREADIDGDGQVNYE +
Sbjct: 113 LGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 161 MKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 217
M D +EE+I +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 218 DGQVNYEVYTIYCVHIMGNT 237
+G +++ + M +T
Sbjct: 61 NGTIDFPEFLTMMARKMKDT 80
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 230 bits (586), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 122/151 (80%), Positives = 124/151 (82%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 23 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 66
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 67 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 126
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READIDGDGQVNYE EF+ MM K
Sbjct: 127 READIDGDGQVNYE--------EFVQMMTAK 149
Score = 202 bits (515), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 108/150 (72%), Positives = 121/150 (80%), Gaps = 11/150 (7%)
Query: 80 MKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 136
M D +EE+I +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 137 DGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN 196
NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTN
Sbjct: 61 --------NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 112
Query: 197 LGEKLTDEEVDEMIREADIDGDGQVNYEVY 226
LGEKLTDEEVDEMIREADIDGDGQVNYE +
Sbjct: 113 LGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 161 MKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 217
M D +EE+I +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 218 DGQVNYEVYTIYCVHIMGNT 237
+G +++ + M +T
Sbjct: 61 NGTIDFPEFLTMMARKMKDT 80
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 229 bits (585), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 122/151 (80%), Positives = 124/151 (82%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 26 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 69
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 129
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READIDGDGQVNYE EF+ MM K
Sbjct: 130 READIDGDGQVNYE--------EFVQMMTAK 152
Score = 203 bits (516), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 108/153 (70%), Positives = 122/153 (79%), Gaps = 11/153 (7%)
Query: 77 ARKMKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 133
+ M D +EE+I +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D
Sbjct: 1 SNAMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVD 60
Query: 134 IDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHV 193
DG NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHV
Sbjct: 61 ADG--------NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV 112
Query: 194 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEVY 226
MTNLGEKLTDEEVDEMIREADIDGDGQVNYE +
Sbjct: 113 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 145
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 158 ARKMKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 214
+ M D +EE+I +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D
Sbjct: 1 SNAMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVD 60
Query: 215 IDGDGQVNYEVYTIYCVHIMGNT 237
DG+G +++ + M +T
Sbjct: 61 ADGNGTIDFPEFLTMMARKMKDT 83
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 229 bits (585), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 122/151 (80%), Positives = 124/151 (82%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 324 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 367
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 368 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 427
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READIDGDGQVNYE EF+ MM K
Sbjct: 428 READIDGDGQVNYE--------EFVQMMTAK 450
Score = 206 bits (523), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/167 (67%), Positives = 129/167 (77%), Gaps = 15/167 (8%)
Query: 67 IDFPEFLTMMARKM----KDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEK 119
IDF E ++ K+ +D +EE+I +EAF +FDKDG+G I+ EL VM +LG+
Sbjct: 285 IDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN 344
Query: 120 LTDEEVDEMIREADIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 179
T+ E+ +MI E D DG NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK
Sbjct: 345 PTEAELQDMINEVDADG--------NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 396
Query: 180 DGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVY 226
DGNG+ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE +
Sbjct: 397 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 443
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 7/114 (6%)
Query: 131 EADIDGDGQVNYEGNGTIDFPEFLTMMARKM----KDTDSEEEI---REAFRVFDKDGNG 183
E +GD VN IDF E ++ K+ +D +EE+I +EAF +FDKDG+G
Sbjct: 268 EVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDG 327
Query: 184 FISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTIYCVHIMGNT 237
I+ EL VM +LG+ T+ E+ +MI E D DG+G +++ + M +T
Sbjct: 328 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDT 381
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 229 bits (585), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 122/151 (80%), Positives = 124/151 (82%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 24 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 67
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 68 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 127
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READIDGDGQVNYE EF+ MM K
Sbjct: 128 READIDGDGQVNYE--------EFVQMMTAK 150
Score = 202 bits (515), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 108/150 (72%), Positives = 121/150 (80%), Gaps = 11/150 (7%)
Query: 80 MKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 136
M D +EE+I +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG
Sbjct: 2 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 61
Query: 137 DGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN 196
NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTN
Sbjct: 62 --------NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 113
Query: 197 LGEKLTDEEVDEMIREADIDGDGQVNYEVY 226
LGEKLTDEEVDEMIREADIDGDGQVNYE +
Sbjct: 114 LGEKLTDEEVDEMIREADIDGDGQVNYEEF 143
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 161 MKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 217
M D +EE+I +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG
Sbjct: 2 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 61
Query: 218 DGQVNYEVYTIYCVHIMGNT 237
+G +++ + M +T
Sbjct: 62 NGTIDFPEFLTMMARKMKDT 81
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 229 bits (585), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 122/151 (80%), Positives = 124/151 (82%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 23 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 66
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 67 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 126
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READIDGDGQVNYE EF+ MM K
Sbjct: 127 READIDGDGQVNYE--------EFVQMMTAK 149
Score = 202 bits (515), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 108/150 (72%), Positives = 121/150 (80%), Gaps = 11/150 (7%)
Query: 80 MKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 136
M D +EE+I +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 137 DGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN 196
NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTN
Sbjct: 61 --------NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 112
Query: 197 LGEKLTDEEVDEMIREADIDGDGQVNYEVY 226
LGEKLTDEEVDEMIREADIDGDGQVNYE +
Sbjct: 113 LGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 161 MKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 217
M D +EE+I +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 218 DGQVNYEVYTIYCVHIMGNT 237
+G +++ + M +T
Sbjct: 61 NGTIDFPEFLTMMARKMKDT 80
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 229 bits (585), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 122/151 (80%), Positives = 124/151 (82%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 23 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 66
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 67 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 126
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READIDGDGQVNYE EF+ MM K
Sbjct: 127 READIDGDGQVNYE--------EFVQMMTAK 149
Score = 202 bits (515), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 108/150 (72%), Positives = 121/150 (80%), Gaps = 11/150 (7%)
Query: 80 MKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 136
M D +EE+I +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 137 DGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN 196
NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTN
Sbjct: 61 --------NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 112
Query: 197 LGEKLTDEEVDEMIREADIDGDGQVNYEVY 226
LGEKLTDEEVDEMIREADIDGDGQVNYE +
Sbjct: 113 LGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 161 MKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 217
M D +EE+I +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 218 DGQVNYEVYTIYCVHIMGNT 237
+G +++ + M +T
Sbjct: 61 NGTIDFPEFLTMMARKMKDT 80
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 229 bits (584), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 122/151 (80%), Positives = 124/151 (82%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 20 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 63
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 64 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 123
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READIDGDGQVNYE EF+ MM K
Sbjct: 124 READIDGDGQVNYE--------EFVQMMTAK 146
Score = 202 bits (514), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/139 (74%), Positives = 115/139 (82%), Gaps = 8/139 (5%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG NGT
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG--------NGT 60
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVD
Sbjct: 61 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 120
Query: 208 EMIREADIDGDGQVNYEVY 226
EMIREADIDGDGQVNYE +
Sbjct: 121 EMIREADIDGDGQVNYEEF 139
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG+G +++ +
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
Query: 229 YCVHIMGNT 237
M +T
Sbjct: 69 MMARKMKDT 77
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 229 bits (584), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/151 (80%), Positives = 124/151 (82%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 20 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 63
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 64 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 123
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READIDGDGQVNYE EF+ MM K
Sbjct: 124 READIDGDGQVNYE--------EFVQMMTAK 146
Score = 202 bits (513), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/139 (74%), Positives = 115/139 (82%), Gaps = 8/139 (5%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG NGT
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG--------NGT 60
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVD
Sbjct: 61 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 120
Query: 208 EMIREADIDGDGQVNYEVY 226
EMIREADIDGDGQVNYE +
Sbjct: 121 EMIREADIDGDGQVNYEEF 139
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG+G +++ +
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
Query: 229 YCVHIMGNT 237
M +T
Sbjct: 69 MMARKMKDT 77
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 229 bits (584), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/151 (80%), Positives = 124/151 (82%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 323 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 366
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 367 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 426
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READIDGDGQVNYE EF+ MM K
Sbjct: 427 READIDGDGQVNYE--------EFVQMMTAK 449
Score = 205 bits (522), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/167 (67%), Positives = 129/167 (77%), Gaps = 15/167 (8%)
Query: 67 IDFPEFLTMMARKM----KDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEK 119
IDF E ++ K+ +D +EE+I +EAF +FDKDG+G I+ EL VM +LG+
Sbjct: 284 IDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN 343
Query: 120 LTDEEVDEMIREADIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 179
T+ E+ +MI E D DG NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK
Sbjct: 344 PTEAELQDMINEVDADG--------NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 395
Query: 180 DGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVY 226
DGNG+ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE +
Sbjct: 396 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 442
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 7/114 (6%)
Query: 131 EADIDGDGQVNYEGNGTIDFPEFLTMMARKM----KDTDSEEEI---REAFRVFDKDGNG 183
E +GD VN IDF E ++ K+ +D +EE+I +EAF +FDKDG+G
Sbjct: 267 EVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDG 326
Query: 184 FISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTIYCVHIMGNT 237
I+ EL VM +LG+ T+ E+ +MI E D DG+G +++ + M +T
Sbjct: 327 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDT 380
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 229 bits (584), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/151 (80%), Positives = 124/151 (82%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 289 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 332
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 333 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 392
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READIDGDGQVNYE EF+ MM K
Sbjct: 393 READIDGDGQVNYE--------EFVQMMTAK 415
Score = 202 bits (514), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 111/167 (66%), Positives = 128/167 (76%), Gaps = 15/167 (8%)
Query: 67 IDFPEFLTMMARKM----KDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEK 119
I F E ++ K+ +D +EE+I +EAF +FDKDG+G I+ EL VM +LG+
Sbjct: 250 IGFKEDGNILGHKLEYNSRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN 309
Query: 120 LTDEEVDEMIREADIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 179
T+ E+ +MI E D DG NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK
Sbjct: 310 PTEAELQDMINEVDADG--------NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 361
Query: 180 DGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVY 226
DGNG+ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE +
Sbjct: 362 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 408
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 7/114 (6%)
Query: 131 EADIDGDGQVNYEGNGTIDFPEFLTMMARKM----KDTDSEEEI---REAFRVFDKDGNG 183
E +GD VN I F E ++ K+ +D +EE+I +EAF +FDKDG+G
Sbjct: 233 EVKFEGDTLVNRIELKGIGFKEDGNILGHKLEYNSRDQLTEEQIAEFKEAFSLFDKDGDG 292
Query: 184 FISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTIYCVHIMGNT 237
I+ EL VM +LG+ T+ E+ +MI E D DG+G +++ + M +T
Sbjct: 293 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDT 346
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 229 bits (584), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/151 (80%), Positives = 124/151 (82%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 28 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 71
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 72 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 131
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READIDGDGQVNYE EF+ MM K
Sbjct: 132 READIDGDGQVNYE--------EFVQMMTAK 154
Score = 202 bits (513), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/139 (74%), Positives = 115/139 (82%), Gaps = 8/139 (5%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG NGT
Sbjct: 17 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG--------NGT 68
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVD
Sbjct: 69 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 128
Query: 208 EMIREADIDGDGQVNYEVY 226
EMIREADIDGDGQVNYE +
Sbjct: 129 EMIREADIDGDGQVNYEEF 147
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG+G +++ +
Sbjct: 17 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 76
Query: 229 YCVHIMGNT 237
M +T
Sbjct: 77 MMARKMKDT 85
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 229 bits (584), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/151 (80%), Positives = 124/151 (82%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 323 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 366
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 367 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 426
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READIDGDGQVNYE EF+ MM K
Sbjct: 427 READIDGDGQVNYE--------EFVQMMTAK 449
Score = 205 bits (522), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 112/167 (67%), Positives = 129/167 (77%), Gaps = 15/167 (8%)
Query: 67 IDFPEFLTMMARKM----KDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEK 119
IDF E ++ K+ +D +EE+I +EAF +FDKDG+G I+ EL VM +LG+
Sbjct: 284 IDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN 343
Query: 120 LTDEEVDEMIREADIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 179
T+ E+ +MI E D DG NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK
Sbjct: 344 PTEAELQDMINEVDADG--------NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 395
Query: 180 DGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVY 226
DGNG+ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE +
Sbjct: 396 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 442
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 7/114 (6%)
Query: 131 EADIDGDGQVNYEGNGTIDFPEFLTMMARKM----KDTDSEEEI---REAFRVFDKDGNG 183
E +GD VN IDF E ++ K+ +D +EE+I +EAF +FDKDG+G
Sbjct: 267 EVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDG 326
Query: 184 FISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTIYCVHIMGNT 237
I+ EL VM +LG+ T+ E+ +MI E D DG+G +++ + M +T
Sbjct: 327 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDT 380
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 229 bits (584), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/151 (80%), Positives = 124/151 (82%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 22 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 65
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 66 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 125
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READIDGDGQVNYE EF+ MM K
Sbjct: 126 READIDGDGQVNYE--------EFVQMMTAK 148
Score = 202 bits (513), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/139 (74%), Positives = 115/139 (82%), Gaps = 8/139 (5%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG NGT
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG--------NGT 62
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVD
Sbjct: 63 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 122
Query: 208 EMIREADIDGDGQVNYEVY 226
EMIREADIDGDGQVNYE +
Sbjct: 123 EMIREADIDGDGQVNYEEF 141
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG+G +++ +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 229 YCVHIMGNT 237
M +T
Sbjct: 71 MMARKMKDT 79
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 229 bits (584), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/151 (80%), Positives = 124/151 (82%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 289 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 332
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 333 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 392
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READIDGDGQVNYE EF+ MM K
Sbjct: 393 READIDGDGQVNYE--------EFVQMMTAK 415
Score = 202 bits (514), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 111/167 (66%), Positives = 128/167 (76%), Gaps = 15/167 (8%)
Query: 67 IDFPEFLTMMARKM----KDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEK 119
I F E ++ K+ +D +EE+I +EAF +FDKDG+G I+ EL VM +LG+
Sbjct: 250 IGFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN 309
Query: 120 LTDEEVDEMIREADIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 179
T+ E+ +MI E D DG NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK
Sbjct: 310 PTEAELQDMINEVDADG--------NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 361
Query: 180 DGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVY 226
DGNG+ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE +
Sbjct: 362 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 408
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 7/114 (6%)
Query: 131 EADIDGDGQVNYEGNGTIDFPEFLTMMARKM----KDTDSEEEI---REAFRVFDKDGNG 183
E +GD VN I F E ++ K+ +D +EE+I +EAF +FDKDG+G
Sbjct: 233 EVKFEGDTLVNRIELKGIGFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDG 292
Query: 184 FISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTIYCVHIMGNT 237
I+ EL VM +LG+ T+ E+ +MI E D DG+G +++ + M +T
Sbjct: 293 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDT 346
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 229 bits (583), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/151 (80%), Positives = 124/151 (82%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 18 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 61
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 62 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 121
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READIDGDGQVNYE EF+ MM K
Sbjct: 122 READIDGDGQVNYE--------EFVQMMTAK 144
Score = 202 bits (513), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/139 (74%), Positives = 115/139 (82%), Gaps = 8/139 (5%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG NGT
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG--------NGT 58
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVD
Sbjct: 59 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 118
Query: 208 EMIREADIDGDGQVNYEVY 226
EMIREADIDGDGQVNYE +
Sbjct: 119 EMIREADIDGDGQVNYEEF 137
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG+G +++ +
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 66
Query: 229 YCVHIMGNT 237
M +T
Sbjct: 67 MMARKMKDT 75
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 228 bits (582), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 121/151 (80%), Positives = 124/151 (82%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 23 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 66
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVD+MI
Sbjct: 67 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMI 126
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READIDGDGQVNYE EF+ MM K
Sbjct: 127 READIDGDGQVNYE--------EFVQMMTAK 149
Score = 202 bits (513), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 107/150 (71%), Positives = 121/150 (80%), Gaps = 11/150 (7%)
Query: 80 MKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 136
M D +EE+I +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 137 DGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN 196
NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTN
Sbjct: 61 --------NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 112
Query: 197 LGEKLTDEEVDEMIREADIDGDGQVNYEVY 226
LGEKLTDEEVD+MIREADIDGDGQVNYE +
Sbjct: 113 LGEKLTDEEVDQMIREADIDGDGQVNYEEF 142
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 161 MKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 217
M D +EE+I +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 218 DGQVNYEVYTIYCVHIMGNT 237
+G +++ + M +T
Sbjct: 61 NGTIDFPEFLTMMARKMKDT 80
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 228 bits (580), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/151 (80%), Positives = 124/151 (82%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 22 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 65
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 66 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 125
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
REA+IDGDGQVNYE EF+ MM K
Sbjct: 126 REANIDGDGQVNYE--------EFVQMMTAK 148
Score = 201 bits (510), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 103/139 (74%), Positives = 115/139 (82%), Gaps = 8/139 (5%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG NGT
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG--------NGT 62
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVD
Sbjct: 63 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 122
Query: 208 EMIREADIDGDGQVNYEVY 226
EMIREA+IDGDGQVNYE +
Sbjct: 123 EMIREANIDGDGQVNYEEF 141
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG+G +++ +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 229 YCVHIMGNT 237
M +T
Sbjct: 71 MMARKMKDT 79
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 228 bits (580), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/148 (81%), Positives = 123/148 (83%), Gaps = 24/148 (16%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 22 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 65
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 66 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 125
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMM 157
READIDGDGQVNYE EF+ MM
Sbjct: 126 READIDGDGQVNYE--------EFVQMM 145
Score = 202 bits (513), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/139 (74%), Positives = 115/139 (82%), Gaps = 8/139 (5%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG NGT
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG--------NGT 62
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVD
Sbjct: 63 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 122
Query: 208 EMIREADIDGDGQVNYEVY 226
EMIREADIDGDGQVNYE +
Sbjct: 123 EMIREADIDGDGQVNYEEF 141
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG+G +++ +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 229 YCVHIMGNT 237
M +T
Sbjct: 71 MMARKMKDT 79
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 228 bits (580), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/149 (81%), Positives = 123/149 (82%), Gaps = 24/149 (16%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 286 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 329
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 330 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 389
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMA 158
READIDGDGQVNYE EF+ MM
Sbjct: 390 READIDGDGQVNYE--------EFVQMMT 410
Score = 205 bits (521), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 112/167 (67%), Positives = 129/167 (77%), Gaps = 15/167 (8%)
Query: 67 IDFPEFLTMMARKM----KDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEK 119
IDF E ++ K+ +D +EE+I +EAF +FDKDG+G I+ EL VM +LG+
Sbjct: 247 IDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN 306
Query: 120 LTDEEVDEMIREADIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 179
T+ E+ +MI E D DG NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK
Sbjct: 307 PTEAELQDMINEVDADG--------NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 358
Query: 180 DGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVY 226
DGNG+ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE +
Sbjct: 359 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 405
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 7/114 (6%)
Query: 131 EADIDGDGQVNYEGNGTIDFPEFLTMMARKM----KDTDSEEEI---REAFRVFDKDGNG 183
E +GD VN IDF E ++ K+ +D +EE+I +EAF +FDKDG+G
Sbjct: 230 EVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDG 289
Query: 184 FISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTIYCVHIMGNT 237
I+ EL VM +LG+ T+ E+ +MI E D DG+G +++ + M +T
Sbjct: 290 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDT 343
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 228 bits (580), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/149 (81%), Positives = 123/149 (82%), Gaps = 24/149 (16%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 20 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 63
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 64 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 123
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMA 158
READIDGDGQVNYE EF+ MM
Sbjct: 124 READIDGDGQVNYE--------EFVQMMT 144
Score = 202 bits (513), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/139 (74%), Positives = 115/139 (82%), Gaps = 8/139 (5%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG NGT
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG--------NGT 60
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVD
Sbjct: 61 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 120
Query: 208 EMIREADIDGDGQVNYEVY 226
EMIREADIDGDGQVNYE +
Sbjct: 121 EMIREADIDGDGQVNYEEF 139
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG+G +++ +
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
Query: 229 YCVHIMGNT 237
M +T
Sbjct: 69 MMARKMKDT 77
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 227 bits (579), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/148 (81%), Positives = 123/148 (83%), Gaps = 24/148 (16%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 19 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 62
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 63 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 122
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMM 157
READIDGDGQVNYE EF+ MM
Sbjct: 123 READIDGDGQVNYE--------EFVQMM 142
Score = 201 bits (512), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/139 (74%), Positives = 115/139 (82%), Gaps = 8/139 (5%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG NGT
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG--------NGT 59
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVD
Sbjct: 60 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 119
Query: 208 EMIREADIDGDGQVNYEVY 226
EMIREADIDGDGQVNYE +
Sbjct: 120 EMIREADIDGDGQVNYEEF 138
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG+G +++ +
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 67
Query: 229 YCVHIMGNT 237
M +T
Sbjct: 68 MMARKMKDT 76
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 227 bits (579), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 121/151 (80%), Positives = 124/151 (82%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD G+GTIDF
Sbjct: 322 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GDGTIDF 365
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 366 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 425
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READIDGDGQVNYE EF+ MM K
Sbjct: 426 READIDGDGQVNYE--------EFVQMMTAK 448
Score = 205 bits (522), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 112/167 (67%), Positives = 129/167 (77%), Gaps = 15/167 (8%)
Query: 67 IDFPEFLTMMARKM----KDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEK 119
IDF E ++ K+ +D +EE+I +EAF +FDKDG+G I+ EL VM +LG+
Sbjct: 283 IDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN 342
Query: 120 LTDEEVDEMIREADIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 179
T+ E+ +MI E D DGDG TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK
Sbjct: 343 PTEAELQDMINEVDADGDG--------TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 394
Query: 180 DGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVY 226
DGNG+ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE +
Sbjct: 395 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 441
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 63/114 (55%), Gaps = 7/114 (6%)
Query: 131 EADIDGDGQVNYEGNGTIDFPEFLTMMARKM----KDTDSEEEI---REAFRVFDKDGNG 183
E +GD VN IDF E ++ K+ +D +EE+I +EAF +FDKDG+G
Sbjct: 266 EVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDG 325
Query: 184 FISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTIYCVHIMGNT 237
I+ EL VM +LG+ T+ E+ +MI E D DGDG +++ + M +T
Sbjct: 326 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDT 379
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 227 bits (579), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 121/149 (81%), Positives = 123/149 (82%), Gaps = 24/149 (16%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 21 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 64
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 65 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 124
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMA 158
READIDGDGQVNYE EF+ MM
Sbjct: 125 READIDGDGQVNYE--------EFVQMMT 145
Score = 202 bits (513), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/139 (74%), Positives = 115/139 (82%), Gaps = 8/139 (5%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG NGT
Sbjct: 10 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG--------NGT 61
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVD
Sbjct: 62 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 121
Query: 208 EMIREADIDGDGQVNYEVY 226
EMIREADIDGDGQVNYE +
Sbjct: 122 EMIREADIDGDGQVNYEEF 140
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG+G +++ +
Sbjct: 10 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 69
Query: 229 YCVHIMGNT 237
M +T
Sbjct: 70 MMARKMKDT 78
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 227 bits (579), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 121/151 (80%), Positives = 124/151 (82%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD G+GTIDF
Sbjct: 22 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GDGTIDF 65
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 66 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 125
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READIDGDGQVNYE EF+ MM K
Sbjct: 126 READIDGDGQVNYE--------EFVQMMTAK 148
Score = 201 bits (512), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/139 (74%), Positives = 115/139 (82%), Gaps = 8/139 (5%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DGDG T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG--------T 62
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVD
Sbjct: 63 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 122
Query: 208 EMIREADIDGDGQVNYEVY 226
EMIREADIDGDGQVNYE +
Sbjct: 123 EMIREADIDGDGQVNYEEF 141
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 43/69 (62%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DGDG +++ +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 70
Query: 229 YCVHIMGNT 237
M +T
Sbjct: 71 MMARKMKDT 79
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 227 bits (578), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 121/151 (80%), Positives = 123/151 (81%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 323 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 366
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMAR MKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 367 PEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 426
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READIDGDGQVNYE EF+ MM K
Sbjct: 427 READIDGDGQVNYE--------EFVQMMTAK 449
Score = 203 bits (517), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 111/167 (66%), Positives = 128/167 (76%), Gaps = 15/167 (8%)
Query: 67 IDFPEFLTMMARKM----KDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEK 119
IDF E ++ K+ +D +EE+I +EAF +FDKDG+G I+ EL VM +LG+
Sbjct: 284 IDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN 343
Query: 120 LTDEEVDEMIREADIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 179
T+ E+ +MI E D DG NGTIDFPEFLTMMAR MKDTDSEEEIREAFRVFDK
Sbjct: 344 PTEAELQDMINEVDADG--------NGTIDFPEFLTMMARWMKDTDSEEEIREAFRVFDK 395
Query: 180 DGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVY 226
DGNG+ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE +
Sbjct: 396 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 442
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 7/114 (6%)
Query: 131 EADIDGDGQVNYEGNGTIDFPEFLTMMARKM----KDTDSEEEI---REAFRVFDKDGNG 183
E +GD VN IDF E ++ K+ +D +EE+I +EAF +FDKDG+G
Sbjct: 267 EVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDG 326
Query: 184 FISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTIYCVHIMGNT 237
I+ EL VM +LG+ T+ E+ +MI E D DG+G +++ + M +T
Sbjct: 327 TITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARWMKDT 380
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 227 bits (578), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 121/151 (80%), Positives = 123/151 (81%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 23 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 66
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGE LTDEEVDEMI
Sbjct: 67 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMI 126
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READIDGDGQVNYE EF+ MM K
Sbjct: 127 READIDGDGQVNYE--------EFVQMMTAK 149
Score = 199 bits (507), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 103/139 (74%), Positives = 114/139 (82%), Gaps = 8/139 (5%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG NGT
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG--------NGT 63
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGE LTDEEVD
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVD 123
Query: 208 EMIREADIDGDGQVNYEVY 226
EMIREADIDGDGQVNYE +
Sbjct: 124 EMIREADIDGDGQVNYEEF 142
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG+G +++ +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 229 YCVHIMGNT 237
M +T
Sbjct: 72 MMARKMKDT 80
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 227 bits (578), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 121/151 (80%), Positives = 123/151 (81%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 22 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 65
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGE LTDEEVDEMI
Sbjct: 66 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMI 125
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READIDGDGQVNYE EF+ MM K
Sbjct: 126 READIDGDGQVNYE--------EFVQMMTAK 148
Score = 199 bits (507), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 103/139 (74%), Positives = 114/139 (82%), Gaps = 8/139 (5%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG NGT
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG--------NGT 62
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGE LTDEEVD
Sbjct: 63 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVD 122
Query: 208 EMIREADIDGDGQVNYEVY 226
EMIREADIDGDGQVNYE +
Sbjct: 123 EMIREADIDGDGQVNYEEF 141
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG+G +++ +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 229 YCVHIMGNT 237
M +T
Sbjct: 71 MMARKMKDT 79
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 226 bits (576), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 121/151 (80%), Positives = 123/151 (81%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 323 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 366
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMARKMK TDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 367 PEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 426
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READIDGDGQVNYE EF+ MM K
Sbjct: 427 READIDGDGQVNYE--------EFVQMMTAK 449
Score = 202 bits (514), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 111/167 (66%), Positives = 128/167 (76%), Gaps = 15/167 (8%)
Query: 67 IDFPEFLTMMARKM----KDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEK 119
IDF E ++ K+ +D +EE+I +EAF +FDKDG+G I+ EL VM +LG+
Sbjct: 284 IDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN 343
Query: 120 LTDEEVDEMIREADIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 179
T+ E+ +MI E D DG NGTIDFPEFLTMMARKMK TDSEEEIREAFRVFDK
Sbjct: 344 PTEAELQDMINEVDADG--------NGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDK 395
Query: 180 DGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVY 226
DGNG+ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE +
Sbjct: 396 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 442
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 226 bits (576), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 120/151 (79%), Positives = 123/151 (81%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD G+GTIDF
Sbjct: 314 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GDGTIDF 357
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFL MMARKMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 358 PEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 417
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READIDGDGQVNYE EF+ MM K
Sbjct: 418 READIDGDGQVNYE--------EFVQMMTAK 440
Score = 207 bits (526), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 131/179 (73%), Gaps = 18/179 (10%)
Query: 58 LFVYHGN-GTIDFPEFLTMMARKMK------DTDSEEEI---REAFRVFDKDGNGFISAA 107
VYH ++FP +M +K K D +EE+I +EAF +FDKDG+G I+
Sbjct: 263 CLVYHAQVRGVNFPSNGAVMQKKTKGWEPTRDQLTEEQIAEFKEAFSLFDKDGDGTITTK 322
Query: 108 ELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSE 167
EL VM +LG+ T+ E+ +MI E D DGDG TIDFPEFL MMARKMKDTDSE
Sbjct: 323 ELGTVMRSLGQNPTEAELQDMINEVDADGDG--------TIDFPEFLIMMARKMKDTDSE 374
Query: 168 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVY 226
EEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE +
Sbjct: 375 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 433
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 58/99 (58%), Gaps = 9/99 (9%)
Query: 148 IDFPEFLTMMARKMK------DTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLG 198
++FP +M +K K D +EE+I +EAF +FDKDG+G I+ EL VM +LG
Sbjct: 273 VNFPSNGAVMQKKTKGWEPTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 332
Query: 199 EKLTDEEVDEMIREADIDGDGQVNYEVYTIYCVHIMGNT 237
+ T+ E+ +MI E D DGDG +++ + I M +T
Sbjct: 333 QNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDT 371
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 224 bits (572), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 122/151 (80%), Positives = 123/151 (81%), Gaps = 26/151 (17%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 22 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 65
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMARKMKD SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 66 PEFLTMMARKMKD--SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 123
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READIDGDGQVNYE EF+TMM K
Sbjct: 124 READIDGDGQVNYE--------EFVTMMTSK 146
Score = 195 bits (495), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/139 (74%), Positives = 113/139 (81%), Gaps = 10/139 (7%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG NGT
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG--------NGT 62
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
IDFPEFLTMMARKMKD SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD
Sbjct: 63 IDFPEFLTMMARKMKD--SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 120
Query: 208 EMIREADIDGDGQVNYEVY 226
EMIREADIDGDGQVNYE +
Sbjct: 121 EMIREADIDGDGQVNYEEF 139
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG+G +++ +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 229 YCVHIMGNTYLKIRK 243
M ++ +IR+
Sbjct: 71 MMARKMKDSEEEIRE 85
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 224 bits (571), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 120/151 (79%), Positives = 123/151 (81%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD G+GTIDF
Sbjct: 322 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GDGTIDF 365
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMARKMK TDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 366 PEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 425
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READIDGDGQVNYE EF+ MM K
Sbjct: 426 READIDGDGQVNYE--------EFVQMMTAK 448
Score = 201 bits (512), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 111/167 (66%), Positives = 127/167 (76%), Gaps = 15/167 (8%)
Query: 67 IDFPEFLTMMARKM----KDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEK 119
IDF E ++ K+ D +EE+I +EAF +FDKDG+G I+ EL VM +LG+
Sbjct: 283 IDFKEDGNILGHKLEYNLPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN 342
Query: 120 LTDEEVDEMIREADIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 179
T+ E+ +MI E D DGDG TIDFPEFLTMMARKMK TDSEEEIREAFRVFDK
Sbjct: 343 PTEAELQDMINEVDADGDG--------TIDFPEFLTMMARKMKYTDSEEEIREAFRVFDK 394
Query: 180 DGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVY 226
DGNG+ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE +
Sbjct: 395 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 441
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 224 bits (571), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 120/151 (79%), Positives = 123/151 (81%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD G+GTIDF
Sbjct: 322 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GDGTIDF 365
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMARKMK TDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 366 PEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 425
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READIDGDGQVNYE EF+ MM K
Sbjct: 426 READIDGDGQVNYE--------EFVQMMTAK 448
Score = 201 bits (511), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 111/167 (66%), Positives = 127/167 (76%), Gaps = 15/167 (8%)
Query: 67 IDFPEFLTMMARKM----KDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEK 119
IDF E ++ K+ D +EE+I +EAF +FDKDG+G I+ EL VM +LG+
Sbjct: 283 IDFKEDGNILGHKLEYNLPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN 342
Query: 120 LTDEEVDEMIREADIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 179
T+ E+ +MI E D DGDG TIDFPEFLTMMARKMK TDSEEEIREAFRVFDK
Sbjct: 343 PTEAELQDMINEVDADGDG--------TIDFPEFLTMMARKMKYTDSEEEIREAFRVFDK 394
Query: 180 DGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVY 226
DGNG+ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE +
Sbjct: 395 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 441
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 224 bits (570), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 120/151 (79%), Positives = 123/151 (81%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD G+GTIDF
Sbjct: 323 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GDGTIDF 366
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMARKMK TDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 367 PEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 426
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READIDGDGQVNYE EF+ MM K
Sbjct: 427 READIDGDGQVNYE--------EFVQMMTAK 449
Score = 202 bits (513), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 111/167 (66%), Positives = 128/167 (76%), Gaps = 15/167 (8%)
Query: 67 IDFPEFLTMMARKM----KDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEK 119
IDF E ++ K+ +D +EE+I +EAF +FDKDG+G I+ EL VM +LG+
Sbjct: 284 IDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN 343
Query: 120 LTDEEVDEMIREADIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 179
T+ E+ +MI E D DGDG TIDFPEFLTMMARKMK TDSEEEIREAFRVFDK
Sbjct: 344 PTEAELQDMINEVDADGDG--------TIDFPEFLTMMARKMKYTDSEEEIREAFRVFDK 395
Query: 180 DGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVY 226
DGNG+ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE +
Sbjct: 396 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 442
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 223 bits (567), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 117/151 (77%), Positives = 123/151 (81%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 22 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 65
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFL +MARKMKDTDSEEE++EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 66 PEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 125
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READ+DGDGQVNYE EF+ +M K
Sbjct: 126 READVDGDGQVNYE--------EFVQVMMAK 148
Score = 197 bits (501), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 100/139 (71%), Positives = 114/139 (82%), Gaps = 8/139 (5%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG NGT
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG--------NGT 62
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
IDFPEFL +MARKMKDTDSEEE++EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD
Sbjct: 63 IDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 122
Query: 208 EMIREADIDGDGQVNYEVY 226
EMIREAD+DGDGQVNYE +
Sbjct: 123 EMIREADVDGDGQVNYEEF 141
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 222 bits (566), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 117/151 (77%), Positives = 123/151 (81%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 19 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 62
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFL +MARKMKDTDSEEE++EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 63 PEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 122
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READ+DGDGQVNYE EF+ +M K
Sbjct: 123 READVDGDGQVNYE--------EFVQVMMAK 145
Score = 197 bits (500), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 100/139 (71%), Positives = 114/139 (82%), Gaps = 8/139 (5%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG NGT
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG--------NGT 59
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
IDFPEFL +MARKMKDTDSEEE++EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD
Sbjct: 60 IDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 119
Query: 208 EMIREADIDGDGQVNYEVY 226
EMIREAD+DGDGQVNYE +
Sbjct: 120 EMIREADVDGDGQVNYEEF 138
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 221 bits (563), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 116/151 (76%), Positives = 123/151 (81%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 22 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 65
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFL +MARKMKDTDSEE+++EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 66 PEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 125
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READ+DGDGQVNYE EF+ +M K
Sbjct: 126 READVDGDGQVNYE--------EFVQVMMAK 148
Score = 196 bits (498), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/139 (71%), Positives = 114/139 (82%), Gaps = 8/139 (5%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG NGT
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG--------NGT 62
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
IDFPEFL +MARKMKDTDSEE+++EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD
Sbjct: 63 IDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 122
Query: 208 EMIREADIDGDGQVNYEVY 226
EMIREAD+DGDGQVNYE +
Sbjct: 123 EMIREADVDGDGQVNYEEF 141
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 219 bits (559), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 119/148 (80%), Positives = 122/148 (82%), Gaps = 25/148 (16%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 18 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 61
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLTMMARKMKDTDSEE IREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 62 PEFLTMMARKMKDTDSEE-IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 120
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMM 157
REA+IDGDGQVNYE EF+ MM
Sbjct: 121 REANIDGDGQVNYE--------EFVQMM 140
Score = 194 bits (493), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 102/139 (73%), Positives = 114/139 (82%), Gaps = 9/139 (6%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG NGT
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG--------NGT 58
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
IDFPEFLTMMARKMKDTDSEE IREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVD
Sbjct: 59 IDFPEFLTMMARKMKDTDSEE-IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 117
Query: 208 EMIREADIDGDGQVNYEVY 226
EMIREA+IDGDGQVNYE +
Sbjct: 118 EMIREANIDGDGQVNYEEF 136
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG+G +++ +
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 66
Query: 229 YCVHIMGNT 237
M +T
Sbjct: 67 MMARKMKDT 75
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 217 bits (553), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 114/151 (75%), Positives = 121/151 (80%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 23 DGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 66
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 67 PEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMI 126
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READ+DGDGQ+NYE EF+ +M K
Sbjct: 127 READVDGDGQINYE--------EFVKVMMAK 149
Score = 195 bits (496), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/152 (67%), Positives = 119/152 (78%), Gaps = 9/152 (5%)
Query: 76 MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADID 135
MA ++ D D E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D D
Sbjct: 1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDAD 59
Query: 136 GDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT 195
G NGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMT
Sbjct: 60 G--------NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT 111
Query: 196 NLGEKLTDEEVDEMIREADIDGDGQVNYEVYT 227
NLGEKLTDEEVDEMIREAD+DGDGQ+NYE +
Sbjct: 112 NLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 216 bits (550), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 114/151 (75%), Positives = 120/151 (79%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDG ITTK+LGTVMRSLGQNPTEAELQDMINEV AD GNGTIDF
Sbjct: 323 DGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGAD----------------GNGTIDF 366
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
P+FLTMMARKMKDTDSEEEIREAFRVF KDGNG+ISAA+LRHVMTNLGEKLTDEEVDEMI
Sbjct: 367 PQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMI 426
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
REA IDGDGQVNYE +F+ MM K
Sbjct: 427 REAGIDGDGQVNYE--------QFVQMMTAK 449
Score = 196 bits (498), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 106/167 (63%), Positives = 127/167 (76%), Gaps = 15/167 (8%)
Query: 67 IDFPEFLTMMARKM----KDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEK 119
IDF E ++ K+ +D +EE+I +EAF +FDKDG+G I+ +L VM +LG+
Sbjct: 284 IDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQN 343
Query: 120 LTDEEVDEMIREADIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 179
T+ E+ +MI E V +GNGTIDFP+FLTMMARKMKDTDSEEEIREAFRVF K
Sbjct: 344 PTEAELQDMINE--------VGADGNGTIDFPQFLTMMARKMKDTDSEEEIREAFRVFGK 395
Query: 180 DGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVY 226
DGNG+ISAA+LRHVMTNLGEKLTDEEVDEMIREA IDGDGQVNYE +
Sbjct: 396 DGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREAGIDGDGQVNYEQF 442
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 7/114 (6%)
Query: 131 EADIDGDGQVNYEGNGTIDFPEFLTMMARKM----KDTDSEEEI---REAFRVFDKDGNG 183
E +GD VN IDF E ++ K+ +D +EE+I +EAF +FDKDG+G
Sbjct: 267 EVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDG 326
Query: 184 FISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTIYCVHIMGNT 237
I+ +L VM +LG+ T+ E+ +MI E DG+G +++ + M +T
Sbjct: 327 GITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDFPQFLTMMARKMKDT 380
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 216 bits (549), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 113/151 (74%), Positives = 121/151 (80%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 23 DGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 66
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMI
Sbjct: 67 PEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMI 126
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READ+DGDGQ+NY+ EF+ +M K
Sbjct: 127 READVDGDGQINYD--------EFVKVMMAK 149
Score = 192 bits (489), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/144 (68%), Positives = 114/144 (79%), Gaps = 8/144 (5%)
Query: 84 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 143
D E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG
Sbjct: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG------- 60
Query: 144 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD 203
NGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTD
Sbjct: 61 -NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTD 119
Query: 204 EEVDEMIREADIDGDGQVNYEVYT 227
EEVDEMIREAD+DGDGQ+NY+ +
Sbjct: 120 EEVDEMIREADVDGDGQINYDEFV 143
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 211 bits (538), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/151 (73%), Positives = 120/151 (79%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 22 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 65
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFL++MARKMK+ DSEEE+ EAF+VFD+DGNG ISAAELRHVMTNLGEKLTD+EVDEMI
Sbjct: 66 PEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMI 125
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READIDGDG +NYE EF+ MM K
Sbjct: 126 READIDGDGHINYE--------EFVRMMVSK 148
Score = 184 bits (466), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/144 (65%), Positives = 112/144 (77%), Gaps = 8/144 (5%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG NGT
Sbjct: 11 EFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG--------NGT 62
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
IDFPEFL++MARKMK+ DSEEE+ EAF+VFD+DGNG ISAAELRHVMTNLGEKLTD+EVD
Sbjct: 63 IDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVD 122
Query: 208 EMIREADIDGDGQVNYEVYTIYCV 231
EMIREADIDGDG +NYE + V
Sbjct: 123 EMIREADIDGDGHINYEEFVRMMV 146
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 211 bits (538), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/151 (73%), Positives = 120/151 (79%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 22 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 65
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFL++MARKMK+ DSEEE+ EAF+VFD+DGNG ISAAELRHVMTNLGEKLTD+EVDEMI
Sbjct: 66 PEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMI 125
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READIDGDG +NYE EF+ MM K
Sbjct: 126 READIDGDGHINYE--------EFVRMMVSK 148
Score = 184 bits (466), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/144 (65%), Positives = 112/144 (77%), Gaps = 8/144 (5%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG NGT
Sbjct: 11 EFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG--------NGT 62
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
IDFPEFL++MARKMK+ DSEEE+ EAF+VFD+DGNG ISAAELRHVMTNLGEKLTD+EVD
Sbjct: 63 IDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVD 122
Query: 208 EMIREADIDGDGQVNYEVYTIYCV 231
EMIREADIDGDG +NYE + V
Sbjct: 123 EMIREADIDGDGHINYEEFVRMMV 146
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 210 bits (534), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 110/134 (82%), Positives = 111/134 (82%), Gaps = 16/134 (11%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTV RSLGQNPTEAELQD INEVDAD GNGTIDF
Sbjct: 22 DGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDAD----------------GNGTIDF 65
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLT ARK KDTDSEEEIREAFRVFDKDGNG+ISAAELRHV TNLGEKLTDEEVDE I
Sbjct: 66 PEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXI 125
Query: 130 READIDGDGQVNYE 143
READIDGDGQVNYE
Sbjct: 126 READIDGDGQVNYE 139
Score = 185 bits (469), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/139 (69%), Positives = 108/139 (77%), Gaps = 8/139 (5%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKDG+G I+ EL V +LG+ T+ E+ + I E D DG NGT
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADG--------NGT 62
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
IDFPEFLT ARK KDTDSEEEIREAFRVFDKDGNG+ISAAELRHV TNLGEKLTDEEVD
Sbjct: 63 IDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVD 122
Query: 208 EMIREADIDGDGQVNYEVY 226
E IREADIDGDGQVNYE +
Sbjct: 123 EXIREADIDGDGQVNYEEF 141
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 209 bits (532), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/134 (81%), Positives = 111/134 (82%), Gaps = 16/134 (11%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTV RSLGQNPTEAELQD INEVDAD GNGTIDF
Sbjct: 23 DGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDAD----------------GNGTIDF 66
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLT ARK KDTDSEEEIREAFRVFDKDGNG+ISAAELRHV TNLGEKLTDEEVD+ I
Sbjct: 67 PEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXI 126
Query: 130 READIDGDGQVNYE 143
READIDGDGQVNYE
Sbjct: 127 READIDGDGQVNYE 140
Score = 184 bits (467), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/139 (69%), Positives = 108/139 (77%), Gaps = 8/139 (5%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKDG+G I+ EL V +LG+ T+ E+ + I E D DG NGT
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADG--------NGT 63
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
IDFPEFLT ARK KDTDSEEEIREAFRVFDKDGNG+ISAAELRHV TNLGEKLTDEEVD
Sbjct: 64 IDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVD 123
Query: 208 EMIREADIDGDGQVNYEVY 226
+ IREADIDGDGQVNYE +
Sbjct: 124 QXIREADIDGDGQVNYEEF 142
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 204 bits (520), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 103/134 (76%), Positives = 112/134 (83%), Gaps = 16/134 (11%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDG ITT+ELGTVMRSLGQNPTEAEL+DM++E+D D GNGT+DF
Sbjct: 22 DGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRD----------------GNGTVDF 65
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFL MMARKMKDTD+EEEIREAFRVFDKDGNGF+SAAELRHVMT LGEKL+DEEVDEMI
Sbjct: 66 PEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMI 125
Query: 130 READIDGDGQVNYE 143
R AD DGDGQVNYE
Sbjct: 126 RAADTDGDGQVNYE 139
Score = 187 bits (475), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 97/145 (66%), Positives = 112/145 (77%), Gaps = 8/145 (5%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +M+ E D DG NGT
Sbjct: 11 EFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDG--------NGT 62
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
+DFPEFL MMARKMKDTD+EEEIREAFRVFDKDGNGF+SAAELRHVMT LGEKL+DEEVD
Sbjct: 63 VDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVD 122
Query: 208 EMIREADIDGDGQVNYEVYTIYCVH 232
EMIR AD DGDGQVNYE + V
Sbjct: 123 EMIRAADTDGDGQVNYEEFVRVLVS 147
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 202 bits (514), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 109/134 (81%), Gaps = 16/134 (11%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTV RSLG NPTEAELQD INEVDAD GNGTI+F
Sbjct: 22 DGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDAD----------------GNGTINF 65
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
PEFLT AR KDTDSEEEIREAFRVFDKDGNG+ISAAELRHV TNLGEKLTDEEVDE I
Sbjct: 66 PEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXI 125
Query: 130 READIDGDGQVNYE 143
READIDGDGQVNYE
Sbjct: 126 READIDGDGQVNYE 139
Score = 179 bits (453), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/139 (68%), Positives = 106/139 (76%), Gaps = 8/139 (5%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKDG+G I+ EL V +LG T+ E+ + I E D DG NGT
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADG--------NGT 62
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
I+FPEFLT AR KDTDSEEEIREAFRVFDKDGNG+ISAAELRHV TNLGEKLTDEEVD
Sbjct: 63 INFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVD 122
Query: 208 EMIREADIDGDGQVNYEVY 226
E IREADIDGDGQVNYE +
Sbjct: 123 EXIREADIDGDGQVNYEEF 141
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 186 bits (471), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/148 (64%), Positives = 115/148 (77%), Gaps = 24/148 (16%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDG IT +EL TV+RSL QNPTE ELQDMI+EVDAD GNGTI+F
Sbjct: 22 DGDGCITVEELATVIRSLDQNPTEEELQDMISEVDAD----------------GNGTIEF 65
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
EFL++MA+K+KDTD+EEE++EAF+VFDKD NG+ISA+ELRHVM NLGEKLTDEEV++MI
Sbjct: 66 DEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMI 125
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMM 157
+EAD+DGDGQVNYE EF+ MM
Sbjct: 126 KEADLDGDGQVNYE--------EFVKMM 145
Score = 172 bits (437), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/146 (60%), Positives = 116/146 (79%), Gaps = 11/146 (7%)
Query: 85 SEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 141
SEE+I +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D DG
Sbjct: 5 SEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADG----- 59
Query: 142 YEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKL 201
NGTI+F EFL++MA+K+KDTD+EEE++EAF+VFDKD NG+ISA+ELRHVM NLGEKL
Sbjct: 60 ---NGTIEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKL 116
Query: 202 TDEEVDEMIREADIDGDGQVNYEVYT 227
TDEEV++MI+EAD+DGDGQVNYE +
Sbjct: 117 TDEEVEQMIKEADLDGDGQVNYEEFV 142
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 164 bits (414), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 83/151 (54%), Positives = 110/151 (72%), Gaps = 24/151 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
+G G I T+ELGT+MR+LGQNPTEAELQD+I E + + NG ++F
Sbjct: 22 EGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAEN----------------NNNGQLNF 65
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
EF +MA++M++TD+EEE+REAF++FD+DG+GFIS AELR VM NLGEK+TDEE+DEMI
Sbjct: 66 TEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMI 125
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
READ DGDG +NYE EF+ M+++K
Sbjct: 126 READFDGDGMINYE--------EFVWMISQK 148
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/140 (53%), Positives = 104/140 (74%), Gaps = 8/140 (5%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E ++AF FDK+G G I+ EL +M LG+ T+ E+ ++I EA+ + +GQ+N
Sbjct: 11 EFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLN------ 64
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
F EF +MA++M++TD+EEE+REAF++FD+DG+GFIS AELR VM NLGEK+TDEE+D
Sbjct: 65 --FTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEID 122
Query: 208 EMIREADIDGDGQVNYEVYT 227
EMIREAD DGDG +NYE +
Sbjct: 123 EMIREADFDGDGMINYEEFV 142
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 145 bits (366), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 71/140 (50%), Positives = 104/140 (74%), Gaps = 9/140 (6%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKD NG IS++EL VM +LG ++ EV++++ E D+DG+ Q
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ-------- 62
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
I+F EFL +M+R++K DSE+E+ EAF+VFDK+G+G ISAAEL+HV+T++GEKLTD EVD
Sbjct: 63 IEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVD 122
Query: 208 EMIREADIDGDGQVNYEVYT 227
+M+RE DG G++N + +
Sbjct: 123 DMLREVS-DGSGEINIQQFA 141
Score = 144 bits (362), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 69/134 (51%), Positives = 98/134 (73%), Gaps = 17/134 (12%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
D +G+I++ EL TVMRSLG +P+EAE+ D++NE+D D GN I+F
Sbjct: 22 DNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVD----------------GNHQIEF 65
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
EFL +M+R++K DSE+E+ EAF+VFDK+G+G ISAAEL+HV+T++GEKLTD EVD+M+
Sbjct: 66 SEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDML 125
Query: 130 READIDGDGQVNYE 143
RE DG G++N +
Sbjct: 126 REVS-DGSGEINIQ 138
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 145 bits (366), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 71/140 (50%), Positives = 104/140 (74%), Gaps = 9/140 (6%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKD NG IS++EL VM +LG ++ EV++++ E D+DG+ Q
Sbjct: 12 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ-------- 63
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
I+F EFL +M+R++K DSE+E+ EAF+VFDK+G+G ISAAEL+HV+T++GEKLTD EVD
Sbjct: 64 IEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVD 123
Query: 208 EMIREADIDGDGQVNYEVYT 227
+M+RE DG G++N + +
Sbjct: 124 DMLREVS-DGSGEINIQQFA 142
Score = 144 bits (362), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 69/134 (51%), Positives = 98/134 (73%), Gaps = 17/134 (12%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
D +G+I++ EL TVMRSLG +P+EAE+ D++NE+D D GN I+F
Sbjct: 23 DNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVD----------------GNHQIEF 66
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
EFL +M+R++K DSE+E+ EAF+VFDK+G+G ISAAEL+HV+T++GEKLTD EVD+M+
Sbjct: 67 SEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDML 126
Query: 130 READIDGDGQVNYE 143
RE DG G++N +
Sbjct: 127 REVS-DGSGEINIQ 139
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGT 66
+GDG I+ EL V+ S+G+ T+AE+ DM+ EV +D + E N+Q + G+ T
Sbjct: 96 NGDGLISAAELKHVLTSIGEKLTDAEVDDMLREV-SDGSGEINIQQFAALLSKGSST 151
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 143 bits (361), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 72/140 (51%), Positives = 102/140 (72%), Gaps = 9/140 (6%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKD +G ISA+EL VM +LG ++ EV +++ E D+DG N
Sbjct: 12 EFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDG--------NHA 63
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
I+F EFL +M+R++K DSE+E+ EAF+VFDK+G+G ISAAEL+HV+T++GEKLTD EVD
Sbjct: 64 IEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVD 123
Query: 208 EMIREADIDGDGQVNYEVYT 227
EM+RE DG G++N + +
Sbjct: 124 EMLREVS-DGSGEINIKQFA 142
Score = 143 bits (361), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 70/132 (53%), Positives = 95/132 (71%), Gaps = 17/132 (12%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
D G+I+ EL TVMRSLG +P+EAE+ D++NE+D D GN I+F
Sbjct: 23 DNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVD----------------GNHAIEF 66
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
EFL +M+R++K DSE+E+ EAF+VFDK+G+G ISAAEL+HV+T++GEKLTD EVDEM+
Sbjct: 67 SEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEML 126
Query: 130 READIDGDGQVN 141
RE DG G++N
Sbjct: 127 REVS-DGSGEIN 137
Score = 35.0 bits (79), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNL-QYAELF 59
+GDG I+ EL V+ S+G+ T+AE+ +M+ EV +D + E N+ Q+A L
Sbjct: 96 NGDGLISAAELKHVLTSIGEKLTDAEVDEMLREV-SDGSGEINIKQFAALL 145
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/82 (84%), Positives = 71/82 (86%), Gaps = 8/82 (9%)
Query: 79 KMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 138
KMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG
Sbjct: 1 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 60
Query: 139 QVNYEGNGTIDFPEFLTMMARK 160
QVNYE EF+ MM K
Sbjct: 61 QVNYE--------EFVQMMTAK 74
Score = 130 bits (326), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 64/68 (94%), Positives = 66/68 (97%)
Query: 160 KMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 219
KMKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG
Sbjct: 1 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 60
Query: 220 QVNYEVYT 227
QVNYE +
Sbjct: 61 QVNYEEFV 68
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 16/70 (22%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DG+G I+ EL VM +LG+ T+ E+ +MI E D D G+G +++
Sbjct: 21 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID----------------GDGQVNY 64
Query: 70 PEFLTMMARK 79
EF+ MM K
Sbjct: 65 EEFVQMMTAK 74
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 131 bits (330), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/85 (81%), Positives = 69/85 (81%), Gaps = 16/85 (18%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 22 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 65
Query: 70 PEFLTMMARKMKDTDSEEEIREAFR 94
PEFLTMMARKMKDTDSEEEIREAFR
Sbjct: 66 PEFLTMMARKMKDTDSEEEIREAFR 90
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/88 (63%), Positives = 65/88 (73%), Gaps = 8/88 (9%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG NGT
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG--------NGT 62
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFR 175
IDFPEFLTMMARKMKDTDSEEEIREAFR
Sbjct: 63 IDFPEFLTMMARKMKDTDSEEEIREAFR 90
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG+G +++ +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 229 YCVHIMGNT 237
M +T
Sbjct: 71 MMARKMKDT 79
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 58 LFVYHGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG 117
LF G+GTI E T+M R + +E E+++ D DGNG I E +T +
Sbjct: 18 LFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGTIDFPEF---LTMMA 73
Query: 118 EKLTDEEVDEMIREA 132
K+ D + +E IREA
Sbjct: 74 RKMKDTDSEEEIREA 88
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 17/101 (16%)
Query: 117 GEKLTDEEVDEMIREA----DIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIRE 172
++LT+E++ E +EA D DGDG + + GT+ R + +E E+++
Sbjct: 1 ADQLTEEQIAE-FKEAFSLFDKDGDGTITTKELGTV---------MRSLGQNPTEAELQD 50
Query: 173 AFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 213
D DGNG I E +T + K+ D + +E IREA
Sbjct: 51 MINEVDADGNGTIDFPEF---LTMMARKMKDTDSEEEIREA 88
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 130 bits (327), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/81 (83%), Positives = 70/81 (86%), Gaps = 8/81 (9%)
Query: 80 MKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 139
MKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ
Sbjct: 1 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 60
Query: 140 VNYEGNGTIDFPEFLTMMARK 160
VNYE EF+ MM K
Sbjct: 61 VNYE--------EFVQMMTAK 73
Score = 128 bits (321), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 63/67 (94%), Positives = 65/67 (97%)
Query: 161 MKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 220
MKDTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ
Sbjct: 1 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 60
Query: 221 VNYEVYT 227
VNYE +
Sbjct: 61 VNYEEFV 67
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 16/70 (22%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DG+G I+ EL VM +LG+ T+ E+ +MI E D D G+G +++
Sbjct: 20 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID----------------GDGQVNY 63
Query: 70 PEFLTMMARK 79
EF+ MM K
Sbjct: 64 EEFVQMMTAK 73
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 128 bits (322), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 91/120 (75%), Gaps = 8/120 (6%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKD NG IS++EL VM +LG ++ EV++++ E D+DG+ Q
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ-------- 62
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
I+F EFL +M+R++K DSE+E+ EAF+VFDK+G+G ISAAEL+HV+T++GEKLTD E++
Sbjct: 63 IEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAELE 122
Score = 127 bits (320), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 86/117 (73%), Gaps = 16/117 (13%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
D +G+I++ EL TVMRSLG +P+EAE+ D++NE+D D GN I+F
Sbjct: 22 DNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVD----------------GNHQIEF 65
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 126
EFL +M+R++K DSE+E+ EAF+VFDK+G+G ISAAEL+HV+T++GEKLTD E++
Sbjct: 66 SEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAELE 122
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 41/58 (70%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVY 226
E +EAF +FDKD NG IS++EL VM +LG ++ EV++++ E D+DG+ Q+ + +
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEF 68
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 128 bits (321), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/84 (79%), Positives = 68/84 (80%), Gaps = 16/84 (19%)
Query: 34 AELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPEFLTMMARKMKDTDSEEEIREAF 93
AELQDMINEVDAD GNGTIDFPEFLTMMARKMKDTDSEEEIREAF
Sbjct: 1 AELQDMINEVDAD----------------GNGTIDFPEFLTMMARKMKDTDSEEEIREAF 44
Query: 94 RVFDKDGNGFISAAELRHVMTNLG 117
RVFDKDGNG+ISAAELRHVMTNLG
Sbjct: 45 RVFDKDGNGYISAAELRHVMTNLG 68
Score = 117 bits (294), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/75 (80%), Positives = 63/75 (84%), Gaps = 8/75 (10%)
Query: 124 EVDEMIREADIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG 183
E+ +MI E D DG NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG
Sbjct: 2 ELQDMINEVDADG--------NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG 53
Query: 184 FISAAELRHVMTNLG 198
+ISAAELRHVMTNLG
Sbjct: 54 YISAAELRHVMTNLG 68
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 11/72 (15%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA----DIDGDGQVNYE 224
E+++ D DGNG I E +T + K+ D + +E IREA D DG+G ++
Sbjct: 2 ELQDMINEVDADGNGTIDFPEF---LTMMARKMKDTDSEEEIREAFRVFDKDGNGYIS-- 56
Query: 225 VYTIYCVHIMGN 236
H+M N
Sbjct: 57 --AAELRHVMTN 66
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 127 bits (320), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/156 (51%), Positives = 98/156 (62%), Gaps = 12/156 (7%)
Query: 84 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 143
+ ++EIREAF +FD DG+G I A EL+ M LG + EE+ +MI ADID DG
Sbjct: 5 EQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMI--ADIDKDG----- 57
Query: 144 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD 203
+GTIDF EFL MM KM + DS EEI +AFR+FD D G IS L+ V LGE +TD
Sbjct: 58 -SGTIDFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTD 116
Query: 204 EEVDEMIREADIDGDGQVNYEVYTIYCVHIMGNTYL 239
EE+ EMI EAD DGDG+VN E + IM T L
Sbjct: 117 EELQEMIDEADRDGDGEVNEEEF----FRIMKKTSL 148
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/134 (50%), Positives = 81/134 (60%), Gaps = 16/134 (11%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DG GTI KEL MR+LG P + E++ MI ++D D G+GTIDF
Sbjct: 20 DGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKD----------------GSGTIDF 63
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
EFL MM KM + DS EEI +AFR+FD D G IS L+ V LGE +TDEE+ EMI
Sbjct: 64 EEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMI 123
Query: 130 READIDGDGQVNYE 143
EAD DGDG+VN E
Sbjct: 124 DEADRDGDGEVNEE 137
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 127 bits (318), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 67/81 (82%), Positives = 69/81 (85%), Gaps = 8/81 (9%)
Query: 80 MKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 139
MKDTDSEEEIREAFRV DKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ
Sbjct: 22 MKDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 81
Query: 140 VNYEGNGTIDFPEFLTMMARK 160
VNYE EF+ MM K
Sbjct: 82 VNYE--------EFVQMMTAK 94
Score = 124 bits (312), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/67 (92%), Positives = 64/67 (95%)
Query: 161 MKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 220
MKDTDSEEEIREAFRV DKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ
Sbjct: 22 MKDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 81
Query: 221 VNYEVYT 227
VNYE +
Sbjct: 82 VNYEEFV 88
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 16/70 (22%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DG+G I+ EL VM +LG+ T+ E+ +MI E D D G+G +++
Sbjct: 41 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID----------------GDGQVNY 84
Query: 70 PEFLTMMARK 79
EF+ MM K
Sbjct: 85 EEFVQMMTAK 94
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/79 (83%), Positives = 68/79 (86%), Gaps = 8/79 (10%)
Query: 82 DTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 141
DTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN
Sbjct: 1 DTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 60
Query: 142 YEGNGTIDFPEFLTMMARK 160
YE EF+ MM K
Sbjct: 61 YE--------EFVQMMTAK 71
Score = 124 bits (310), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 61/65 (93%), Positives = 63/65 (96%)
Query: 163 DTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 222
DTDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN
Sbjct: 1 DTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 60
Query: 223 YEVYT 227
YE +
Sbjct: 61 YEEFV 65
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 16/70 (22%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DG+G I+ EL VM +LG+ T+ E+ +MI E D D G+G +++
Sbjct: 18 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID----------------GDGQVNY 61
Query: 70 PEFLTMMARK 79
EF+ MM K
Sbjct: 62 EEFVQMMTAK 71
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 123 bits (309), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 64/79 (81%), Positives = 68/79 (86%), Gaps = 8/79 (10%)
Query: 82 DTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 141
DTDSEEEIREAFRVFDKDGNG+ISAA+LRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN
Sbjct: 2 DTDSEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 61
Query: 142 YEGNGTIDFPEFLTMMARK 160
YE +F+ MM K
Sbjct: 62 YE--------DFVQMMTAK 72
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/62 (96%), Positives = 62/62 (100%)
Query: 163 DTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 222
DTDSEEEIREAFRVFDKDGNG+ISAA+LRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN
Sbjct: 2 DTDSEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 61
Query: 223 YE 224
YE
Sbjct: 62 YE 63
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 16/70 (22%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DG+G I+ +L VM +LG+ T+ E+ +MI E D D G+G +++
Sbjct: 19 DGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADID----------------GDGQVNY 62
Query: 70 PEFLTMMARK 79
+F+ MM K
Sbjct: 63 EDFVQMMTAK 72
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/75 (85%), Positives = 66/75 (88%), Gaps = 8/75 (10%)
Query: 83 TDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 142
TDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY
Sbjct: 1 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 60
Query: 143 EGNGTIDFPEFLTMM 157
E EF+ MM
Sbjct: 61 E--------EFVQMM 67
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/64 (93%), Positives = 62/64 (96%)
Query: 164 TDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 223
TDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY
Sbjct: 1 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 60
Query: 224 EVYT 227
E +
Sbjct: 61 EEFV 64
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 16/67 (23%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DG+G I+ EL VM +LG+ T+ E+ +MI E D D G+G +++
Sbjct: 17 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID----------------GDGQVNY 60
Query: 70 PEFLTMM 76
EF+ MM
Sbjct: 61 EEFVQMM 67
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 7/60 (11%)
Query: 58 LFVYHGNGTIDFPEF---LTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT 114
+F GNG I E +T + K+ D + +E IREA D DG+G ++ E +MT
Sbjct: 13 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA----DIDGDGQVNYEEFVQMMT 68
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/75 (85%), Positives = 66/75 (88%), Gaps = 8/75 (10%)
Query: 83 TDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 142
TDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY
Sbjct: 1 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 60
Query: 143 EGNGTIDFPEFLTMM 157
E EF+ MM
Sbjct: 61 E--------EFVQMM 67
Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/64 (93%), Positives = 62/64 (96%)
Query: 164 TDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 223
TDSEEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY
Sbjct: 1 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 60
Query: 224 EVYT 227
E +
Sbjct: 61 EEFV 64
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 16/67 (23%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DG+G I+ EL VM +LG+ T+ E+ +MI E D D G+G +++
Sbjct: 17 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID----------------GDGQVNY 60
Query: 70 PEFLTMM 76
EF+ MM
Sbjct: 61 EEFVQMM 67
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 98/156 (62%), Gaps = 12/156 (7%)
Query: 84 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 143
+ ++EIREAF +FD DG+G I A EL+ M LG + EE+ +MI E D DG
Sbjct: 25 EQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDG------- 77
Query: 144 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD 203
+GTIDF EFLTMM KM + DS EEI +AFR+FD D +G I+ +LR V LGE LT+
Sbjct: 78 -SGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTE 136
Query: 204 EEVDEMIREADIDGDGQVNYEVYTIYCVHIMGNTYL 239
EE+ EMI EAD + D +++ + + + IM T L
Sbjct: 137 EELQEMIAEADRNDDNEIDEDEF----IRIMKKTSL 168
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/150 (45%), Positives = 88/150 (58%), Gaps = 24/150 (16%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DG GTI KEL MR+LG P + E++ MI+E+D D G+GTIDF
Sbjct: 40 DGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKD----------------GSGTIDF 83
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
EFLTMM KM + DS EEI +AFR+FD D +G I+ +LR V LGE LT+EE+ EMI
Sbjct: 84 EEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMI 143
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMAR 159
EAD + D + ID EF+ +M +
Sbjct: 144 AEADRNDDNE--------IDEDEFIRIMKK 165
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 100/165 (60%), Gaps = 32/165 (19%)
Query: 1 MIEEYGSLLD-----GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQY 55
MI E+ + D G G I+TKELGTVMR LGQNPT+ EL +I EVD D
Sbjct: 18 MIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDED--------- 68
Query: 56 AELFVYHGNGTIDFPEFLTMMARKMKDT---DSEEEIREAFRVFDKDGNGFISAAELRHV 112
G+GTIDF EFL MM R+MK+ SEEE+ + FR+FDK+ +GFI EL +
Sbjct: 69 -------GSGTIDFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEI 121
Query: 113 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGTIDFPEFLTMM 157
+ GE +T+E+++++++++D + DG+ IDF EFL MM
Sbjct: 122 LRATGEHVTEEDIEDLMKDSDKNNDGR--------IDFDEFLKMM 158
Score = 106 bits (265), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 92/142 (64%), Gaps = 11/142 (7%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E + AF +FD DG G IS EL VM LG+ T EE+D +I E D DG +GT
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDG--------SGT 72
Query: 148 IDFPEFLTMMARKMKDT---DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 204
IDF EFL MM R+MK+ SEEE+ + FR+FDK+ +GFI EL ++ GE +T+E
Sbjct: 73 IDFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEE 132
Query: 205 EVDEMIREADIDGDGQVNYEVY 226
+++++++++D + DG+++++ +
Sbjct: 133 DIEDLMKDSDKNNDGRIDFDEF 154
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
E + AF +FD DG G IS EL VM LG+ T EE+D +I E D DG G +++E + +
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 229 YCVHIM 234
V M
Sbjct: 81 MMVRQM 86
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 100/165 (60%), Gaps = 32/165 (19%)
Query: 1 MIEEYGSLLD-----GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQY 55
MI E+ + D G G I+TKELGTVMR LGQNPT+ EL +I EVD D
Sbjct: 18 MIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDED--------- 68
Query: 56 AELFVYHGNGTIDFPEFLTMMARKMKDT---DSEEEIREAFRVFDKDGNGFISAAELRHV 112
G+GTIDF EFL MM R+MK+ SEEE+ + FR+FDK+ +GFI EL +
Sbjct: 69 -------GSGTIDFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEI 121
Query: 113 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGTIDFPEFLTMM 157
+ GE +T+E+++++++++D + DG+ IDF EFL MM
Sbjct: 122 LRATGEHVTEEDIEDLMKDSDKNNDGR--------IDFDEFLKMM 158
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 92/142 (64%), Gaps = 11/142 (7%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E + AF +FD DG G IS EL VM LG+ T EE+D +I E D DG +GT
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDG--------SGT 72
Query: 148 IDFPEFLTMMARKMKDT---DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 204
IDF EFL MM R+MK+ SEEE+ + FR+FDK+ +GFI EL ++ GE +T+E
Sbjct: 73 IDFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEE 132
Query: 205 EVDEMIREADIDGDGQVNYEVY 226
+++++++++D + DG+++++ +
Sbjct: 133 DIEDLMKDSDKNNDGRIDFDEF 154
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
E + AF +FD DG G IS EL VM LG+ T EE+D +I E D DG G +++E + +
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 229 YCVHIM 234
V M
Sbjct: 81 MMVRQM 86
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/75 (82%), Positives = 64/75 (85%), Gaps = 8/75 (10%)
Query: 86 EEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGN 145
EEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE-- 58
Query: 146 GTIDFPEFLTMMARK 160
EF+ MM K
Sbjct: 59 ------EFVQMMTAK 67
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/61 (93%), Positives = 59/61 (96%)
Query: 167 EEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVY 226
EEEIREAFRVFDKDGNG+ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE +
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 60
Query: 227 T 227
Sbjct: 61 V 61
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 16/70 (22%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DG+G I+ EL VM +LG+ T+ E+ +MI E D D G+G +++
Sbjct: 14 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID----------------GDGQVNY 57
Query: 70 PEFLTMMARK 79
EF+ MM K
Sbjct: 58 EEFVQMMTAK 67
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 7/60 (11%)
Query: 58 LFVYHGNGTIDFPEF---LTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT 114
+F GNG I E +T + K+ D + +E IREA D DG+G ++ E +MT
Sbjct: 10 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA----DIDGDGQVNYEEFVQMMT 65
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 99/165 (60%), Gaps = 32/165 (19%)
Query: 1 MIEEYGSLLD-----GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQY 55
MI E+ + D G G I+TKELGTVMR LGQNPT+ EL +I EVD D
Sbjct: 18 MIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDED--------- 68
Query: 56 AELFVYHGNGTIDFPEFLTMMARKMKDT---DSEEEIREAFRVFDKDGNGFISAAELRHV 112
G+GTIDF EFL MM R+MK+ SEEE+ FR+FDK+ +GFI EL +
Sbjct: 69 -------GSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEI 121
Query: 113 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGTIDFPEFLTMM 157
+ GE +T+E+++++++++D + DG+ IDF EFL MM
Sbjct: 122 LRATGEHVTEEDIEDLMKDSDKNNDGR--------IDFDEFLKMM 158
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 91/142 (64%), Gaps = 11/142 (7%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E + AF +FD DG G IS EL VM LG+ T EE+D +I E D DG +GT
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDG--------SGT 72
Query: 148 IDFPEFLTMMARKMKDT---DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 204
IDF EFL MM R+MK+ SEEE+ FR+FDK+ +GFI EL ++ GE +T+E
Sbjct: 73 IDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEE 132
Query: 205 EVDEMIREADIDGDGQVNYEVY 226
+++++++++D + DG+++++ +
Sbjct: 133 DIEDLMKDSDKNNDGRIDFDEF 154
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
E + AF +FD DG G IS EL VM LG+ T EE+D +I E D DG G +++E + +
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 229 YCVHIM 234
V M
Sbjct: 81 MMVRQM 86
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 96/165 (58%), Gaps = 32/165 (19%)
Query: 1 MIEEYGSLLD-----GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQY 55
MI E+ + D G G I+ KELGTVMR LGQ PT+ EL +I EVD D
Sbjct: 15 MIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDED--------- 65
Query: 56 AELFVYHGNGTIDFPEFLTMMARKMKDT---DSEEEIREAFRVFDKDGNGFISAAELRHV 112
G+GTIDF EFL MM R+MK+ SEEE+ E FR+FD++ +G+I A EL +
Sbjct: 66 -------GSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEI 118
Query: 113 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGTIDFPEFLTMM 157
GE +TDEE++ ++++ D + DG+ IDF EFL MM
Sbjct: 119 FRASGEHVTDEEIESLMKDGDKNNDGR--------IDFDEFLKMM 155
Score = 109 bits (272), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 90/142 (63%), Gaps = 11/142 (7%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E + AF +FD DG G IS EL VM LG+ T EE+D +I E D DG +GT
Sbjct: 18 EFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDG--------SGT 69
Query: 148 IDFPEFLTMMARKMKDT---DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 204
IDF EFL MM R+MK+ SEEE+ E FR+FD++ +G+I A EL + GE +TDE
Sbjct: 70 IDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDE 129
Query: 205 EVDEMIREADIDGDGQVNYEVY 226
E++ ++++ D + DG+++++ +
Sbjct: 130 EIESLMKDGDKNNDGRIDFDEF 151
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
E + AF +FD DG G IS EL VM LG+ T EE+D +I E D DG G +++E + +
Sbjct: 18 EFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLV 77
Query: 229 YCVHIM 234
V M
Sbjct: 78 MMVRQM 83
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 117 bits (294), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 99/165 (60%), Gaps = 32/165 (19%)
Query: 1 MIEEYGSLLD-----GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQY 55
MI E+ + D G G I+TKELGTVMR LGQNPT+ EL +I EVD D
Sbjct: 15 MIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDED--------- 65
Query: 56 AELFVYHGNGTIDFPEFLTMMARKMKDT---DSEEEIREAFRVFDKDGNGFISAAELRHV 112
G+GTIDF EFL MM R+MK+ SEEE+ FR+FDK+ +GFI EL +
Sbjct: 66 -------GSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEI 118
Query: 113 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGTIDFPEFLTMM 157
+ GE +T+E+++++++++D + DG+ IDF EFL MM
Sbjct: 119 LRATGEHVTEEDIEDLMKDSDKNNDGR--------IDFDEFLKMM 155
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 91/142 (64%), Gaps = 11/142 (7%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E + AF +FD DG G IS EL VM LG+ T EE+D +I E D DG +GT
Sbjct: 18 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDG--------SGT 69
Query: 148 IDFPEFLTMMARKMKDT---DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 204
IDF EFL MM R+MK+ SEEE+ FR+FDK+ +GFI EL ++ GE +T+E
Sbjct: 70 IDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEE 129
Query: 205 EVDEMIREADIDGDGQVNYEVY 226
+++++++++D + DG+++++ +
Sbjct: 130 DIEDLMKDSDKNNDGRIDFDEF 151
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
E + AF +FD DG G IS EL VM LG+ T EE+D +I E D DG G +++E + +
Sbjct: 18 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 77
Query: 229 YCVHIM 234
V M
Sbjct: 78 MMVRQM 83
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 117 bits (293), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 96/146 (65%), Gaps = 24/146 (16%)
Query: 12 DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPE 71
DG+I+TKELG VMR LGQNPT ELQ+MI+EVD D G+GT+DF E
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDED----------------GSGTVDFDE 76
Query: 72 FLTMMARKMKDTD---SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 128
FL MM R MKD SEEE+ + FR+FDK+ +G+I EL+ ++ GE +T+++++E+
Sbjct: 77 FLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEEL 136
Query: 129 IREADIDGDGQVNYEGNGTIDFPEFL 154
+++ D + DG+++Y+ +F EF+
Sbjct: 137 MKDGDKNNDGRIDYD-----EFLEFM 157
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 89/143 (62%), Gaps = 12/143 (8%)
Query: 88 EIREAFRVFDKDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNG 146
E + AF +F +G IS EL VM LG+ T EE+ EMI E D DG +G
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDG--------SG 70
Query: 147 TIDFPEFLTMMARKMKDTD---SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD 203
T+DF EFL MM R MKD SEEE+ + FR+FDK+ +G+I EL+ ++ GE +T+
Sbjct: 71 TVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITE 130
Query: 204 EEVDEMIREADIDGDGQVNYEVY 226
++++E++++ D + DG+++Y+ +
Sbjct: 131 DDIEELMKDGDKNNDGRIDYDEF 153
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 169 EIREAFRVFDKDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYT 227
E + AF +F +G IS EL VM LG+ T EE+ EMI E D DG G V+++ +
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 228 IYCVHIM 234
+ V M
Sbjct: 79 VMMVRSM 85
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 117 bits (292), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 91/151 (60%), Gaps = 27/151 (17%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DG G I+ KELGTVMR LGQ PT+ EL +I EVD D G+GTIDF
Sbjct: 29 DGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDED----------------GSGTIDF 72
Query: 70 PEFLTMMARKMKDT---DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 126
EFL MM R+MK+ SEEE+ E FR+FD++ +G+I A EL + GE +TDEE++
Sbjct: 73 EEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIE 132
Query: 127 EMIREADIDGDGQVNYEGNGTIDFPEFLTMM 157
++++ D + DG+ IDF EFL MM
Sbjct: 133 SLMKDGDKNNDGR--------IDFDEFLKMM 155
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 90/142 (63%), Gaps = 11/142 (7%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E + AF +FD DG G IS EL VM LG+ T EE+D +I E D DG +GT
Sbjct: 18 EFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDG--------SGT 69
Query: 148 IDFPEFLTMMARKMKDT---DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 204
IDF EFL MM R+MK+ SEEE+ E FR+FD++ +G+I A EL + GE +TDE
Sbjct: 70 IDFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDE 129
Query: 205 EVDEMIREADIDGDGQVNYEVY 226
E++ ++++ D + DG+++++ +
Sbjct: 130 EIESLMKDGDKNNDGRIDFDEF 151
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
E + AF +FD DG G IS EL VM LG+ T EE+D +I E D DG G +++E + +
Sbjct: 18 EFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLV 77
Query: 229 YCVHIM 234
V M
Sbjct: 78 MMVRQM 83
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 116 bits (291), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 91/135 (67%), Gaps = 19/135 (14%)
Query: 12 DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPE 71
DG+I+TKELG VMR LGQNPT ELQ+MI+EVD D G+GT+DF E
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDED----------------GSGTVDFDE 76
Query: 72 FLTMMARKMKDTD---SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 128
FL MM R MKD SEEE+ + FR+FDK+ +G+I EL+ ++ GE +T+++++E+
Sbjct: 77 FLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEEL 136
Query: 129 IREADIDGDGQVNYE 143
+++ D + DG+++Y+
Sbjct: 137 MKDGDKNNDGRIDYD 151
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 89/143 (62%), Gaps = 12/143 (8%)
Query: 88 EIREAFRVFDKDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNG 146
E + AF +F +G IS EL VM LG+ T EE+ EMI E D DG +G
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDG--------SG 70
Query: 147 TIDFPEFLTMMARKMKDTD---SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD 203
T+DF EFL MM R MKD SEEE+ + FR+FDK+ +G+I EL+ ++ GE +T+
Sbjct: 71 TVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITE 130
Query: 204 EEVDEMIREADIDGDGQVNYEVY 226
++++E++++ D + DG+++Y+ +
Sbjct: 131 DDIEELMKDGDKNNDGRIDYDEW 153
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 169 EIREAFRVFDKDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYT 227
E + AF +F +G IS EL VM LG+ T EE+ EMI E D DG G V+++ +
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 228 IYCVHIM 234
+ V M
Sbjct: 79 VMMVRSM 85
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 91/135 (67%), Gaps = 19/135 (14%)
Query: 12 DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPE 71
DG+I+TKELG VMR LGQNPT ELQ+MI+EVD D G+GT+DF E
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDED----------------GSGTVDFDE 76
Query: 72 FLTMMARKMKDTD---SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 128
FL MM R MKD SEEE+ + FR+FDK+ +G+I EL+ ++ GE +T+++++E+
Sbjct: 77 FLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEEL 136
Query: 129 IREADIDGDGQVNYE 143
+++ D + DG+++Y+
Sbjct: 137 MKDGDKNNDGRIDYD 151
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 88/141 (62%), Gaps = 12/141 (8%)
Query: 88 EIREAFRVFDKDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNG 146
E + AF +F +G IS EL VM LG+ T EE+ EMI E D DG +G
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDG--------SG 70
Query: 147 TIDFPEFLTMMARKMKDTD---SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD 203
T+DF EFL MM R MKD SEEE+ + FR+FDK+ +G+I EL+ ++ GE +T+
Sbjct: 71 TVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITE 130
Query: 204 EEVDEMIREADIDGDGQVNYE 224
++++E++++ D + DG+++Y+
Sbjct: 131 DDIEELMKDGDKNNDGRIDYD 151
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 169 EIREAFRVFDKDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYT 227
E + AF +F +G IS EL VM LG+ T EE+ EMI E D DG G V+++ +
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 228 IYCVHIM 234
+ V M
Sbjct: 79 VMMVRSM 85
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 98/165 (59%), Gaps = 32/165 (19%)
Query: 1 MIEEYGSLLD-----GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQY 55
MI E+ + D G G I+TKELGTVMR LGQNPT+ EL +I EVD D
Sbjct: 18 MIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDED--------- 68
Query: 56 AELFVYHGNGTIDFPEFLTMMARKMKDT---DSEEEIREAFRVFDKDGNGFISAAELRHV 112
G+GTIDF EFL MM R+MK+ SEEE+ FR+FDK+ +GFI EL +
Sbjct: 69 -------GSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEI 121
Query: 113 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGTIDFPEFLTMM 157
+ GE + +E+++++++++D + DG+ IDF EFL MM
Sbjct: 122 LRATGEHVIEEDIEDLMKDSDKNNDGR--------IDFDEFLKMM 158
Score = 103 bits (257), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 11/142 (7%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E + AF +FD DG G IS EL VM LG+ T EE+D +I E D DG +GT
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDG--------SGT 72
Query: 148 IDFPEFLTMMARKMKDT---DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 204
IDF EFL MM R+MK+ SEEE+ FR+FDK+ +GFI EL ++ GE + +E
Sbjct: 73 IDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEE 132
Query: 205 EVDEMIREADIDGDGQVNYEVY 226
+++++++++D + DG+++++ +
Sbjct: 133 DIEDLMKDSDKNNDGRIDFDEF 154
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
E + AF +FD DG G IS EL VM LG+ T EE+D +I E D DG G +++E + +
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 229 YCVHIM 234
V M
Sbjct: 81 MMVRQM 86
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/63 (87%), Positives = 60/63 (95%)
Query: 165 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 224
DSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYE
Sbjct: 1 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 60
Query: 225 VYT 227
+
Sbjct: 61 EFV 63
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/77 (76%), Positives = 65/77 (84%), Gaps = 8/77 (10%)
Query: 84 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 143
DSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYE
Sbjct: 1 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 60
Query: 144 GNGTIDFPEFLTMMARK 160
EF+ +M K
Sbjct: 61 --------EFVKVMMAK 69
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 16/70 (22%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
D +G I+ EL VM +LG+ T+ E+ +MI E D D G+G I++
Sbjct: 16 DQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD----------------GDGQINY 59
Query: 70 PEFLTMMARK 79
EF+ +M K
Sbjct: 60 EEFVKVMMAK 69
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 96/146 (65%), Gaps = 24/146 (16%)
Query: 12 DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPE 71
DG+I+TKELG VMR LGQNPT ELQ+MI+EVD D G+GT+DF E
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDED----------------GSGTVDFDE 76
Query: 72 FLTMMARKMKDTD---SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 128
FL MM R MKD +EEE+ + FR+FDK+ +G+I EL+ ++ GE +T+++++E+
Sbjct: 77 FLVMMVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEEL 136
Query: 129 IREADIDGDGQVNYEGNGTIDFPEFL 154
+++ D + DG+++Y+ +F EF+
Sbjct: 137 MKDGDKNNDGRIDYD-----EFLEFM 157
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 89/143 (62%), Gaps = 12/143 (8%)
Query: 88 EIREAFRVFDKDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNG 146
E + AF +F +G IS EL VM LG+ T EE+ EMI E D DG +G
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDG--------SG 70
Query: 147 TIDFPEFLTMMARKMKDTD---SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD 203
T+DF EFL MM R MKD +EEE+ + FR+FDK+ +G+I EL+ ++ GE +T+
Sbjct: 71 TVDFDEFLVMMVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITE 130
Query: 204 EEVDEMIREADIDGDGQVNYEVY 226
++++E++++ D + DG+++Y+ +
Sbjct: 131 DDIEELMKDGDKNNDGRIDYDEF 153
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 169 EIREAFRVFDKDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYT 227
E + AF +F +G IS EL VM LG+ T EE+ EMI E D DG G V+++ +
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 228 IYCVHIM 234
+ V M
Sbjct: 79 VMMVRSM 85
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 96/146 (65%), Gaps = 24/146 (16%)
Query: 12 DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPE 71
DG+I+TKELG VMR LGQNPT ELQ+MI+EVD D G+GT+DF E
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDED----------------GSGTVDFDE 76
Query: 72 FLTMMARKMKDTD---SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 128
FL MM R MKD SEEE+ + FR++DK+ +G+I EL+ ++ GE +T+++++E+
Sbjct: 77 FLVMMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEEL 136
Query: 129 IREADIDGDGQVNYEGNGTIDFPEFL 154
+++ D + DG+++Y+ +F EF+
Sbjct: 137 MKDGDKNNDGRIDYD-----EFLEFM 157
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 89/143 (62%), Gaps = 12/143 (8%)
Query: 88 EIREAFRVFDKDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNG 146
E + AF +F +G IS EL VM LG+ T EE+ EMI E D DG +G
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDG--------SG 70
Query: 147 TIDFPEFLTMMARKMKDTD---SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD 203
T+DF EFL MM R MKD SEEE+ + FR++DK+ +G+I EL+ ++ GE +T+
Sbjct: 71 TVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDELKIMLQATGETITE 130
Query: 204 EEVDEMIREADIDGDGQVNYEVY 226
++++E++++ D + DG+++Y+ +
Sbjct: 131 DDIEELMKDGDKNNDGRIDYDEF 153
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 169 EIREAFRVFDKDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYT 227
E + AF +F +G IS EL VM LG+ T EE+ EMI E D DG G V+++ +
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 228 IYCVHIM 234
+ V M
Sbjct: 79 VMMVRSM 85
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 92/143 (64%), Gaps = 8/143 (5%)
Query: 84 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 143
+ ++EIREAF +FD DG G I EL+ M LG + EE+ +MI E ++ E
Sbjct: 3 EQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISE--------IDKE 54
Query: 144 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD 203
G G ++F +FLT+M +KM + D++EEI +AF++FD D G IS L+ V LGE LTD
Sbjct: 55 GTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTD 114
Query: 204 EEVDEMIREADIDGDGQVNYEVY 226
EE+ EMI EAD DGDG+V+ + +
Sbjct: 115 EELQEMIDEADRDGDGEVSEQEF 137
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 88/150 (58%), Gaps = 24/150 (16%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DG GTI KEL MR+LG P + E++ MI+E+D G G ++F
Sbjct: 18 DGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDK----------------EGTGKMNF 61
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
+FLT+M +KM + D++EEI +AF++FD D G IS L+ V LGE LTDEE+ EMI
Sbjct: 62 GDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMI 121
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMAR 159
EAD DGDG+V+ + EFL +M +
Sbjct: 122 DEADRDGDGEVSEQ--------EFLRIMKK 143
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/81 (72%), Positives = 66/81 (81%), Gaps = 8/81 (9%)
Query: 80 MKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 139
MK+ DSEEE+ EAF+VFD+DGNG ISAAELRHVMTNLGEKLTD+EVDEMIREADIDGDG
Sbjct: 1 MKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGH 60
Query: 140 VNYEGNGTIDFPEFLTMMARK 160
+NYE EF+ MM K
Sbjct: 61 INYE--------EFVRMMVSK 73
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 62/71 (87%)
Query: 161 MKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 220
MK+ DSEEE+ EAF+VFD+DGNG ISAAELRHVMTNLGEKLTD+EVDEMIREADIDGDG
Sbjct: 1 MKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGH 60
Query: 221 VNYEVYTIYCV 231
+NYE + V
Sbjct: 61 INYEEFVRMMV 71
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 16/70 (22%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DG+G I+ EL VM +LG+ T+ E+ +MI E D D G+G I++
Sbjct: 20 DGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADID----------------GDGHINY 63
Query: 70 PEFLTMMARK 79
EF+ MM K
Sbjct: 64 EEFVRMMVSK 73
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 95/146 (65%), Gaps = 24/146 (16%)
Query: 12 DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPE 71
DG I+TKELG VMR LGQNPT ELQ+MI+EVD D G+GT+DF E
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDED----------------GSGTVDFDE 76
Query: 72 FLTMMARKMKDTD---SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 128
FL MM R MKD +EEE+ + FR+FDK+ +G+I EL+ ++ GE +T+++++E+
Sbjct: 77 FLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEEL 136
Query: 129 IREADIDGDGQVNYEGNGTIDFPEFL 154
+++ D + DG+++Y+ +F EF+
Sbjct: 137 MKDGDKNNDGRIDYD-----EFLEFM 157
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 89/143 (62%), Gaps = 12/143 (8%)
Query: 88 EIREAFRVFDKDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNG 146
E + AF +F +G IS EL VM LG+ T EE+ EMI E D DG +G
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDG--------SG 70
Query: 147 TIDFPEFLTMMARKMKDTD---SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD 203
T+DF EFL MM R MKD +EEE+ + FR+FDK+ +G+I EL+ ++ GE +T+
Sbjct: 71 TVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITE 130
Query: 204 EEVDEMIREADIDGDGQVNYEVY 226
++++E++++ D + DG+++Y+ +
Sbjct: 131 DDIEELMKDGDKNNDGRIDYDEF 153
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 169 EIREAFRVFDKDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYT 227
E + AF +F +G IS EL VM LG+ T EE+ EMI E D DG G V+++ +
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 228 IYCVHIM 234
+ V M
Sbjct: 79 VMMVRCM 85
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 113 bits (283), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 95/146 (65%), Gaps = 24/146 (16%)
Query: 12 DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPE 71
DG+I+TKELG VMR LGQNPT ELQ+MI+EVD D G+GT+DF E
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDED----------------GSGTVDFDE 76
Query: 72 FLTMMARKMKDTD---SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 128
FL MM R MKD SEEE+ + FR+ DK+ +G+I EL+ ++ GE +T+++++E+
Sbjct: 77 FLVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEEL 136
Query: 129 IREADIDGDGQVNYEGNGTIDFPEFL 154
+++ D + DG+++Y+ +F EF+
Sbjct: 137 MKDGDKNNDGRIDYD-----EFLEFM 157
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 88/143 (61%), Gaps = 12/143 (8%)
Query: 88 EIREAFRVFDKDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNG 146
E + AF +F +G IS EL VM LG+ T EE+ EMI E D DG +G
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDG--------SG 70
Query: 147 TIDFPEFLTMMARKMKDTD---SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD 203
T+DF EFL MM R MKD SEEE+ + FR+ DK+ +G+I EL+ ++ GE +T+
Sbjct: 71 TVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDELKIMLQATGETITE 130
Query: 204 EEVDEMIREADIDGDGQVNYEVY 226
++++E++++ D + DG+++Y+ +
Sbjct: 131 DDIEELMKDGDKNNDGRIDYDEF 153
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 169 EIREAFRVFDKDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYT 227
E + AF +F +G IS EL VM LG+ T EE+ EMI E D DG G V+++ +
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 228 IYCVHIM 234
+ V M
Sbjct: 79 VMMVRSM 85
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe
Bound With Er Alpha Peptide
Length = 80
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/75 (78%), Positives = 59/75 (78%), Gaps = 16/75 (21%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 22 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 65
Query: 70 PEFLTMMARKMKDTD 84
PEFLTMMARKMKDTD
Sbjct: 66 PEFLTMMARKMKDTD 80
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 55/78 (70%), Gaps = 8/78 (10%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D D GNGT
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD--------GNGT 62
Query: 148 IDFPEFLTMMARKMKDTD 165
IDFPEFLTMMARKMKDTD
Sbjct: 63 IDFPEFLTMMARKMKDTD 80
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG+G +++ +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 229 YCVHIMGNT 237
M +T
Sbjct: 71 MMARKMKDT 79
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 117 GEKLTDEEVDEMIREA----DIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIRE 172
++LT+E++ E +EA D DGDG + + GT+ R + +E E+++
Sbjct: 1 ADQLTEEQIAE-FKEAFSLFDKDGDGTITTKELGTV---------MRSLGQNPTEAELQD 50
Query: 173 AFRVFDKDGNGFISAAELRHVM 194
D DGNG I E +M
Sbjct: 51 MINEVDADGNGTIDFPEFLTMM 72
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
Length = 79
Score = 110 bits (275), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/74 (78%), Positives = 58/74 (78%), Gaps = 16/74 (21%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 22 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 65
Query: 70 PEFLTMMARKMKDT 83
PEFLTMMARKMKDT
Sbjct: 66 PEFLTMMARKMKDT 79
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 54/77 (70%), Gaps = 8/77 (10%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D D GNGT
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD--------GNGT 62
Query: 148 IDFPEFLTMMARKMKDT 164
IDFPEFLTMMARKMKDT
Sbjct: 63 IDFPEFLTMMARKMKDT 79
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG+G +++ +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 229 YCVHIMGNT 237
M +T
Sbjct: 71 MMARKMKDT 79
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 117 GEKLTDEEVDEMIREA----DIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIRE 172
++LT+E++ E +EA D DGDG + + GT+ R + +E E+++
Sbjct: 1 ADQLTEEQIAE-FKEAFSLFDKDGDGTITTKELGTV---------MRSLGQNPTEAELQD 50
Query: 173 AFRVFDKDGNGFISAAELRHVM 194
D DGNG I E +M
Sbjct: 51 MINEVDADGNGTIDFPEFLTMM 72
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 110 bits (275), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/76 (71%), Positives = 65/76 (85%), Gaps = 8/76 (10%)
Query: 82 DTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 141
DTD+EEE++EAF+VFDKD NG+ISA+ELRHVM NLGEKLTDEEV++MI+EAD+DGDGQVN
Sbjct: 4 DTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVN 63
Query: 142 YEGNGTIDFPEFLTMM 157
YE EF+ MM
Sbjct: 64 YE--------EFVKMM 71
Score = 109 bits (272), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 50/65 (76%), Positives = 61/65 (93%)
Query: 163 DTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 222
DTD+EEE++EAF+VFDKD NG+ISA+ELRHVM NLGEKLTDEEV++MI+EAD+DGDGQVN
Sbjct: 4 DTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVN 63
Query: 223 YEVYT 227
YE +
Sbjct: 64 YEEFV 68
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 16/67 (23%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
D +G I+ EL VM +LG+ T+ E++ MI E D D G+G +++
Sbjct: 21 DQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLD----------------GDGQVNY 64
Query: 70 PEFLTMM 76
EF+ MM
Sbjct: 65 EEFVKMM 71
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/74 (77%), Positives = 58/74 (78%), Gaps = 16/74 (21%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD G+GTIDF
Sbjct: 22 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GDGTIDF 65
Query: 70 PEFLTMMARKMKDT 83
PEFLTMMARKMKDT
Sbjct: 66 PEFLTMMARKMKDT 79
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 54/77 (70%), Gaps = 8/77 (10%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DGD GT
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD--------GT 62
Query: 148 IDFPEFLTMMARKMKDT 164
IDFPEFLTMMARKMKDT
Sbjct: 63 IDFPEFLTMMARKMKDT 79
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 43/69 (62%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DGDG +++ +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 70
Query: 229 YCVHIMGNT 237
M +T
Sbjct: 71 MMARKMKDT 79
Score = 27.3 bits (59), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 117 GEKLTDEEVDEMIREA----DIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIRE 172
++LT+E++ E +EA D DGDG + + GT+ R + +E E+++
Sbjct: 1 ADQLTEEQIAE-FKEAFSLFDKDGDGTITTKELGTV---------MRSLGQNPTEAELQD 50
Query: 173 AFRVFDKDGNGFISAAELRHVM 194
D DG+G I E +M
Sbjct: 51 MINEVDADGDGTIDFPEFLTMM 72
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A
Binding Motif (Nscate) Peptide From The N-Terminal
Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium
Channel Alpha1c Subunit
Length = 77
Score = 107 bits (266), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/72 (77%), Positives = 56/72 (77%), Gaps = 16/72 (22%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 22 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 65
Query: 70 PEFLTMMARKMK 81
PEFLTMMARKMK
Sbjct: 66 PEFLTMMARKMK 77
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 52/75 (69%), Gaps = 8/75 (10%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D D GNGT
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD--------GNGT 62
Query: 148 IDFPEFLTMMARKMK 162
IDFPEFLTMMARKMK
Sbjct: 63 IDFPEFLTMMARKMK 77
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG+G +++ +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 229 YCVHIM 234
M
Sbjct: 71 MMARKM 76
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 117 GEKLTDEEVDEMIREA----DIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIRE 172
++LT+E++ E +EA D DGDG + + GT+ R + +E E+++
Sbjct: 1 ADQLTEEQIAE-FKEAFSLFDKDGDGTITTKELGTV---------MRSLGQNPTEAELQD 50
Query: 173 AFRVFDKDGNGFISAAELRHVM 194
D DGNG I E +M
Sbjct: 51 MINEVDADGNGTIDFPEFLTMM 72
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/74 (70%), Positives = 63/74 (85%), Gaps = 8/74 (10%)
Query: 84 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 143
D+EEE++EAF+VFDKD NG+ISA+ELRHVM NLGEKLTDEEV++MI+EAD+DGDGQVNYE
Sbjct: 1 DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 60
Query: 144 GNGTIDFPEFLTMM 157
EF+ MM
Sbjct: 61 --------EFVKMM 66
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 59/63 (93%)
Query: 165 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 224
D+EEE++EAF+VFDKD NG+ISA+ELRHVM NLGEKLTDEEV++MI+EAD+DGDGQVNYE
Sbjct: 1 DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 60
Query: 225 VYT 227
+
Sbjct: 61 EFV 63
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 16/67 (23%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
D +G I+ EL VM +LG+ T+ E++ MI E D D G+G +++
Sbjct: 16 DQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLD----------------GDGQVNY 59
Query: 70 PEFLTMM 76
EF+ MM
Sbjct: 60 EEFVKMM 66
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 85/146 (58%), Gaps = 12/146 (8%)
Query: 87 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNG 146
+E +EAF + D++ +GFI +L ++ ++G+ TDE ++ M+ EA G
Sbjct: 7 QEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSEAP------------G 54
Query: 147 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 206
I+F FLTM K+ TD E+ IR AF FD++ +GFI LR ++T +G++ TDEEV
Sbjct: 55 PINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEV 114
Query: 207 DEMIREADIDGDGQVNYEVYTIYCVH 232
DEM REA ID G NY +T H
Sbjct: 115 DEMYREAPIDKKGNFNYVEFTRILKH 140
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 73/131 (55%), Gaps = 20/131 (15%)
Query: 12 DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPE 71
DG I ++L ++ S+G+NPT+ L+ M++E G I+F
Sbjct: 21 DGFIDKEDLHDMLASMGKNPTDEYLEGMMSEAP--------------------GPINFTM 60
Query: 72 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRE 131
FLTM K+ TD E+ IR AF FD++ +GFI LR ++T +G++ TDEEVDEM RE
Sbjct: 61 FLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYRE 120
Query: 132 ADIDGDGQVNY 142
A ID G NY
Sbjct: 121 APIDKKGNFNY 131
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 56/74 (75%), Gaps = 16/74 (21%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 22 DGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 65
Query: 70 PEFLTMMARKMKDT 83
PEFL +MARKMKDT
Sbjct: 66 PEFLNLMARKMKDT 79
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 53/77 (68%), Gaps = 8/77 (10%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D D GNGT
Sbjct: 11 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDAD--------GNGT 62
Query: 148 IDFPEFLTMMARKMKDT 164
IDFPEFL +MARKMKDT
Sbjct: 63 IDFPEFLNLMARKMKDT 79
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG+G +++ +
Sbjct: 11 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 229 YCVHIMGNT 237
M +T
Sbjct: 71 LMARKMKDT 79
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 14/82 (17%)
Query: 117 GEKLTDEEVDEMIREA----DIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIRE 172
++LTDE++ E +EA D DGDG + + GT+ R + +E E+++
Sbjct: 1 ADQLTDEQISE-FKEAFSLFDKDGDGCITTKELGTV---------MRSLGQNPTEAELQD 50
Query: 173 AFRVFDKDGNGFISAAELRHVM 194
D DGNG I E ++M
Sbjct: 51 MINEVDADGNGTIDFPEFLNLM 72
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal
Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
N-Terminal Domain
Length = 76
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 55/71 (77%), Gaps = 16/71 (22%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 22 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 65
Query: 70 PEFLTMMARKM 80
PEFLTMMARKM
Sbjct: 66 PEFLTMMARKM 76
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 51/74 (68%), Gaps = 8/74 (10%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D D GNGT
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD--------GNGT 62
Query: 148 IDFPEFLTMMARKM 161
IDFPEFLTMMARKM
Sbjct: 63 IDFPEFLTMMARKM 76
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG+G +++ +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 229 YCVHIM 234
M
Sbjct: 71 MMARKM 76
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 117 GEKLTDEEVDEMIREA----DIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIRE 172
++LT+E++ E +EA D DGDG + + GT+ R + +E E+++
Sbjct: 1 ADQLTEEQIAE-FKEAFSLFDKDGDGTITTKELGTV---------MRSLGQNPTEAELQD 50
Query: 173 AFRVFDKDGNGFISAAELRHVM 194
D DGNG I E +M
Sbjct: 51 MINEVDADGNGTIDFPEFLTMM 72
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal
Domain
Length = 76
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 55/71 (77%), Gaps = 16/71 (22%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 22 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 65
Query: 70 PEFLTMMARKM 80
PEFLTMMARKM
Sbjct: 66 PEFLTMMARKM 76
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 51/74 (68%), Gaps = 8/74 (10%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D D GNGT
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD--------GNGT 62
Query: 148 IDFPEFLTMMARKM 161
IDFPEFLTMMARKM
Sbjct: 63 IDFPEFLTMMARKM 76
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG+G +++ +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 229 YCVHIM 234
M
Sbjct: 71 MMARKM 76
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 14/81 (17%)
Query: 118 EKLTDEEVDEMIREA----DIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREA 173
++LT+E++ E +EA D DGDG + + GT+ R + +E E+++
Sbjct: 2 DQLTEEQIAE-FKEAFSLFDKDGDGTITTKELGTV---------MRSLGQNPTEAELQDM 51
Query: 174 FRVFDKDGNGFISAAELRHVM 194
D DGNG I E +M
Sbjct: 52 INEVDADGNGTIDFPEFLTMM 72
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 81/143 (56%), Gaps = 9/143 (6%)
Query: 84 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 143
D E +EAF +FD + GFI+ L+ V+ G ++ +EM EAD G
Sbjct: 3 DQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATG------- 55
Query: 144 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD 203
NG I FPEFL+MM R+MK T SE+ +R+AFR FD +G G+I A L+ + NLG++L
Sbjct: 56 -NGKIQFPEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKP 114
Query: 204 EEVDEMIREADIDGDGQVNYEVY 226
E E + + + GQ+ Y+ +
Sbjct: 115 HEFAEFLGITETE-KGQIRYDNF 136
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 70/131 (53%), Gaps = 17/131 (12%)
Query: 13 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPEF 72
G IT + L TV++ G A +M NE DA GNG I FPEF
Sbjct: 21 GFITKEGLQTVLKQFGVRVEPAAFNEMFNEADAT----------------GNGKIQFPEF 64
Query: 73 LTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 132
L+MM R+MK T SE+ +R+AFR FD +G G+I A L+ + NLG++L E E +
Sbjct: 65 LSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLGIT 124
Query: 133 DIDGDGQVNYE 143
+ + GQ+ Y+
Sbjct: 125 ETE-KGQIRYD 134
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/70 (77%), Positives = 54/70 (77%), Gaps = 16/70 (22%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 22 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 65
Query: 70 PEFLTMMARK 79
PEFLTMMARK
Sbjct: 66 PEFLTMMARK 75
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 50/73 (68%), Gaps = 8/73 (10%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D D GNGT
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD--------GNGT 62
Query: 148 IDFPEFLTMMARK 160
IDFPEFLTMMARK
Sbjct: 63 IDFPEFLTMMARK 75
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 40/58 (68%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVY 226
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG+G +++ +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 117 GEKLTDEEVDEMIREA----DIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIRE 172
++LT+E++ E +EA D DGDG + + GT+ R + +E E+++
Sbjct: 1 ADQLTEEQIAE-FKEAFSLFDKDGDGTITTKELGTV---------MRSLGQNPTEAELQD 50
Query: 173 AFRVFDKDGNGFISAAELRHVM 194
D DGNG I E +M
Sbjct: 51 MINEVDADGNGTIDFPEFLTMM 72
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin
Amino- Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/70 (77%), Positives = 54/70 (77%), Gaps = 16/70 (22%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD GNGTIDF
Sbjct: 23 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD----------------GNGTIDF 66
Query: 70 PEFLTMMARK 79
PEFLTMMARK
Sbjct: 67 PEFLTMMARK 76
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 50/73 (68%), Gaps = 8/73 (10%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D D GNGT
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD--------GNGT 63
Query: 148 IDFPEFLTMMARK 160
IDFPEFLTMMARK
Sbjct: 64 IDFPEFLTMMARK 76
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 40/58 (68%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVY 226
E +EAF +FDKDG+G I+ EL VM +LG+ T+ E+ +MI E D DG+G +++ +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 117 GEKLTDEEVDEMIREA----DIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIRE 172
++LT+E++ E +EA D DGDG + + GT+ R + +E E+++
Sbjct: 2 ADQLTEEQIAE-FKEAFSLFDKDGDGTITTKELGTV---------MRSLGQNPTEAELQD 51
Query: 173 AFRVFDKDGNGFISAAELRHVM 194
D DGNG I E +M
Sbjct: 52 MINEVDADGNGTIDFPEFLTMM 73
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 100 bits (249), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/72 (75%), Positives = 54/72 (75%), Gaps = 16/72 (22%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDGTITTKELGTVMRSLG NPTEAELQDMINEVDAD GNGTIDF
Sbjct: 22 DGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDAD----------------GNGTIDF 65
Query: 70 PEFLTMMARKMK 81
PEFLTMMAR MK
Sbjct: 66 PEFLTMMARIMK 77
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 50/75 (66%), Gaps = 8/75 (10%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF ++DKDG+G I+ EL VM +LG T+ E+ +MI E D D GNGT
Sbjct: 11 EFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDAD--------GNGT 62
Query: 148 IDFPEFLTMMARKMK 162
IDFPEFLTMMAR MK
Sbjct: 63 IDFPEFLTMMARIMK 77
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
E +EAF ++DKDG+G I+ EL VM +LG T+ E+ +MI E D DG+G +++ +
Sbjct: 11 EFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 229 YCVHIM 234
IM
Sbjct: 71 MMARIM 76
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 14/84 (16%)
Query: 118 EKLTDEEVDEMIREA----DIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREA 173
++LT+E++ E +EA D DGDG + + GT+ R + +E E+++
Sbjct: 2 DQLTEEQIAE-FKEAFSLYDKDGDGTITTKELGTV---------MRSLGLNPTEAELQDM 51
Query: 174 FRVFDKDGNGFISAAELRHVMTNL 197
D DGNG I E +M +
Sbjct: 52 INEVDADGNGTIDFPEFLTMMARI 75
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 100 bits (249), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 88/145 (60%), Gaps = 12/145 (8%)
Query: 83 TDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 142
T S ++I+E F++FDKD +G +S EL + +LG+ T+ E++ + GQ+N
Sbjct: 1 TASADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTI--------KGQLNA 52
Query: 143 EGNGTIDFPEFLTMMARKMK-DTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKL 201
+ D F T+ + +K T+ +E+ +AFR DK+GNG I AELR ++ NLG+ L
Sbjct: 53 K---EFDLATFKTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDAL 109
Query: 202 TDEEVDEMIREADIDGDGQVNYEVY 226
T EV+E+++E + GDG +NYE +
Sbjct: 110 TSSEVEELMKEVSVSGDGAINYESF 134
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 79/135 (58%), Gaps = 20/135 (14%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
D DG ++ +ELG+ +RSLG+NPT AEL + +++A E D
Sbjct: 17 DNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKE-------------------FDL 57
Query: 70 PEFLTMMARKMK-DTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 128
F T+ + +K T+ +E+ +AFR DK+GNG I AELR ++ NLG+ LT EV+E+
Sbjct: 58 ATFKTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEEL 117
Query: 129 IREADIDGDGQVNYE 143
++E + GDG +NYE
Sbjct: 118 MKEVSVSGDGAINYE 132
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 80/135 (59%), Gaps = 17/135 (12%)
Query: 11 GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFP 70
GDG I + G VMR+LGQNPT AE+ ++ +DE NL+ T+ F
Sbjct: 22 GDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDE---MNLK-----------TLKFE 67
Query: 71 EFLTMMA--RKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 128
+FL MM K KD E+ E RVFDK+GNG + AE+RHV+ LGEK+T+EEV+++
Sbjct: 68 QFLPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQL 127
Query: 129 IREADIDGDGQVNYE 143
+ + D +G +NYE
Sbjct: 128 VAGHE-DSNGCINYE 141
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 86/139 (61%), Gaps = 9/139 (6%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF++FD+ G+G I ++ VM LG+ T+ EV +++ D ++N + T
Sbjct: 10 EFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSD---EMNLK---T 63
Query: 148 IDFPEFLTMMA--RKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 205
+ F +FL MM K KD E+ E RVFDK+GNG + AE+RHV+ LGEK+T+EE
Sbjct: 64 LKFEQFLPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEE 123
Query: 206 VDEMIREADIDGDGQVNYE 224
V++++ + D +G +NYE
Sbjct: 124 VEQLVAGHE-DSNGCINYE 141
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 80/135 (59%), Gaps = 17/135 (12%)
Query: 11 GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFP 70
GDG I + G VMR+LGQNPT AE+ ++ +DE NL+ T+ F
Sbjct: 20 GDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDE---MNLK-----------TLKFE 65
Query: 71 EFLTMMA--RKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 128
+FL MM K KD E+ E RVFDK+GNG + AE+RHV+ LGEK+T+EEV+++
Sbjct: 66 QFLPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQL 125
Query: 129 IREADIDGDGQVNYE 143
+ + D +G +NYE
Sbjct: 126 VAGHE-DSNGCINYE 139
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 86/139 (61%), Gaps = 9/139 (6%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF++FD+ G+G I ++ VM LG+ T+ EV +++ D ++N + T
Sbjct: 8 EFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSD---EMNLK---T 61
Query: 148 IDFPEFLTMMA--RKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 205
+ F +FL MM K KD E+ E RVFDK+GNG + AE+RHV+ LGEK+T+EE
Sbjct: 62 LKFEQFLPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEE 121
Query: 206 VDEMIREADIDGDGQVNYE 224
V++++ + D +G +NYE
Sbjct: 122 VEQLVAGHE-DSNGCINYE 139
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 82/148 (55%), Gaps = 8/148 (5%)
Query: 84 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 143
+ ++EI EAF +FD + +GF+ EL+ M LG +L E+ ++I E D E
Sbjct: 20 EQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYD--------SE 71
Query: 144 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD 203
G + + +F +M K+ D +EI+ AF++FD D G IS LR V LGE LTD
Sbjct: 72 GRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTD 131
Query: 204 EEVDEMIREADIDGDGQVNYEVYTIYCV 231
EE+ MI E D+DGDG++N + C
Sbjct: 132 EELRAMIEEFDLDGDGEINENEFIAICT 159
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 74/142 (52%), Gaps = 18/142 (12%)
Query: 2 IEEYGSLLD--GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELF 59
I E SL D DG + EL M++LG + E+ D+I+E D++
Sbjct: 25 IYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSE------------- 71
Query: 60 VYHGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK 119
G + + +F +M K+ D +EI+ AF++FD D G IS LR V LGE
Sbjct: 72 ---GRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGET 128
Query: 120 LTDEEVDEMIREADIDGDGQVN 141
LTDEE+ MI E D+DGDG++N
Sbjct: 129 LTDEELRAMIEEFDLDGDGEIN 150
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 93.6 bits (231), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 100/169 (59%), Gaps = 17/169 (10%)
Query: 66 TIDFPEFLTMMARKMKDTDSEE--EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 123
+ +P L ++RK + EE E+REAFR FDKD +G+I+ +L + M +G T+
Sbjct: 4 CVKYP--LRNLSRKDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEM 61
Query: 124 EVDEMIREADIDGDGQVNYEGNGTIDFPEFLTMMARKM----KDTDSEEEIREAFRVFDK 179
E+ E+ + Q+N G +DF +F+ +M K+ D +E+R+AFR FD
Sbjct: 62 ELIELSQ--------QINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDT 113
Query: 180 DGNGFISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYEVYT 227
+G+G IS +ELR M LG ++ +++E+IR+ D++GDG+V++E +
Sbjct: 114 NGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFV 162
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 86/155 (55%), Gaps = 29/155 (18%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
D DG I ++LG MR++G PTE EL ++ + + NL G +DF
Sbjct: 37 DKDGYINCRDLGNCMRTMGYMPTEMEL------IELSQQINMNL----------GGHVDF 80
Query: 70 PEFLTMMARKM----KDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN-LGEKLTDEE 124
+F+ +M K+ D +E+R+AFR FD +G+G IS +ELR M LG ++ +
Sbjct: 81 DDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRD 140
Query: 125 VDEMIREADIDGDGQVNYEGNGTIDFPEFLTMMAR 159
++E+IR+ D++GDG+V DF EF+ MM+R
Sbjct: 141 IEEIIRDVDLNGDGRV--------DFEEFVRMMSR 167
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 78/136 (57%), Gaps = 17/136 (12%)
Query: 11 GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFP 70
GDG I + G VMR+LGQNPT AE+ ++ +DE ++S +DF
Sbjct: 23 GDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDE-LKSR-------------RVDFE 68
Query: 71 EFLTMM--ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 128
FL M+ K + + E+ E FRVFDK+GNG + AELRHV+T LGEK+T+EEV E
Sbjct: 69 TFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEV-ET 127
Query: 129 IREADIDGDGQVNYEG 144
+ D +G +NYE
Sbjct: 128 VLAGHEDSNGCINYEA 143
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 90/154 (58%), Gaps = 9/154 (5%)
Query: 82 DTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 141
+ D EE +EAF +FD+ G+G I ++ VM LG+ T+ EV +++ G+ + +
Sbjct: 5 NKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVL------GNPKSD 58
Query: 142 YEGNGTIDFPEFLTMM--ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGE 199
+ +DF FL M+ K + + E+ E FRVFDK+GNG + AELRHV+T LGE
Sbjct: 59 ELKSRRVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGE 118
Query: 200 KLTDEEVDEMIREADIDGDGQVNYEVYTIYCVHI 233
K+T+EEV E + D +G +NYE + + + +
Sbjct: 119 KMTEEEV-ETVLAGHEDSNGCINYEAFLKHILSV 151
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 86/143 (60%), Gaps = 8/143 (5%)
Query: 84 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 143
+ ++EIREAF +FD DG G I EL+ LG + EE+ + I E D +G G+ N
Sbjct: 28 EQKQEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKXN-- 85
Query: 144 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD 203
F +FLT+ +K + D++EEI +AF++FD D G IS L+ V LGE LTD
Sbjct: 86 ------FGDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTD 139
Query: 204 EEVDEMIREADIDGDGQVNYEVY 226
EE+ E I EAD DGDG+V+ + +
Sbjct: 140 EELQEXIDEADRDGDGEVSEQEF 162
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 76/132 (57%), Gaps = 16/132 (12%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DG GTI KEL R+LG P + E++ I+E+D + G G +F
Sbjct: 43 DGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKE----------------GTGKXNF 86
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
+FLT+ +K + D++EEI +AF++FD D G IS L+ V LGE LTDEE+ E I
Sbjct: 87 GDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEXI 146
Query: 130 READIDGDGQVN 141
EAD DGDG+V+
Sbjct: 147 DEADRDGDGEVS 158
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 8 LLDGD--GTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 46
L D D G I+ K L V + LG+N T+ ELQ+ I+E D D
Sbjct: 112 LFDDDETGKISFKNLKRVAKELGENLTDEELQEXIDEADRD 152
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 90/146 (61%), Gaps = 13/146 (8%)
Query: 87 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNG 146
EE+REAFR FDKD +G+I+ +L + M +G T+ E+ E+ + Q+N G
Sbjct: 11 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQ--------QINMNLGG 62
Query: 147 TIDFPEFLTMMARKM----KDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN-LGEKL 201
+DF +F+ +M K+ D +E+R+AFR FD +G+G IS +ELR M LG ++
Sbjct: 63 HVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQV 122
Query: 202 TDEEVDEMIREADIDGDGQVNYEVYT 227
+++E+IR+ D++GDG+V++E +
Sbjct: 123 GHRDIEEIIRDVDLNGDGRVDFEEFV 148
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 86/155 (55%), Gaps = 29/155 (18%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
D DG I ++LG MR++G PTE EL ++ + + NL G +DF
Sbjct: 23 DKDGYINCRDLGNCMRTMGYMPTEMEL------IELSQQINMNL----------GGHVDF 66
Query: 70 PEFLTMMARKM----KDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN-LGEKLTDEE 124
+F+ +M K+ D +E+R+AFR FD +G+G IS +ELR M LG ++ +
Sbjct: 67 DDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRD 126
Query: 125 VDEMIREADIDGDGQVNYEGNGTIDFPEFLTMMAR 159
++E+IR+ D++GDG+V DF EF+ MM+R
Sbjct: 127 IEEIIRDVDLNGDGRV--------DFEEFVRMMSR 153
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 90/146 (61%), Gaps = 13/146 (8%)
Query: 87 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNG 146
EE+REAFR FDKD +G+I+ +L + M +G T+ E+ E+ + Q+N G
Sbjct: 11 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQ--------QINMNLGG 62
Query: 147 TIDFPEFLTMMARKM----KDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN-LGEKL 201
+DF +F+ +M K+ D +E+R+AFR FD +G+G IS +ELR M LG ++
Sbjct: 63 HVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQV 122
Query: 202 TDEEVDEMIREADIDGDGQVNYEVYT 227
+++E+IR+ D++GDG+V++E +
Sbjct: 123 GHRDIEEIIRDVDLNGDGRVDFEEFV 148
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 86/155 (55%), Gaps = 29/155 (18%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
D DG I ++LG MR++G PTE EL ++ + + NL G +DF
Sbjct: 23 DKDGYINCRDLGNCMRTMGYMPTEMEL------IELSQQINMNL----------GGHVDF 66
Query: 70 PEFLTMMARKM----KDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN-LGEKLTDEE 124
+F+ +M K+ D +E+R+AFR FD +G+G IS +ELR M LG ++ +
Sbjct: 67 DDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRD 126
Query: 125 VDEMIREADIDGDGQVNYEGNGTIDFPEFLTMMAR 159
++E+IR+ D++GDG+V DF EF+ MM+R
Sbjct: 127 IEEIIRDVDLNGDGRV--------DFEEFVRMMSR 153
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 81/141 (57%), Gaps = 13/141 (9%)
Query: 87 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNG 146
+E +EAF++ D+D +GFIS ++R +LG T++E+D M+ EA G
Sbjct: 57 QEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA------------PG 104
Query: 147 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 206
I+F FLT+ ++ TD E+ I AF +FD +G+G L+ +T GEK + +EV
Sbjct: 105 PINFTMFLTIFGDRIAGTDEEDVIVNAFNLFD-EGDGKCKEETLKRSLTTWGEKFSQDEV 163
Query: 207 DEMIREADIDGDGQVNYEVYT 227
D+ + EA IDG+G ++ + +
Sbjct: 164 DQALSEAPIDGNGLIDIKKFA 184
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 29/154 (18%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
D DG I+ ++ SLG+ TE EL M+ E G I+F
Sbjct: 69 DKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA--------------------PGPINF 108
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
FLT+ ++ TD E+ I AF +FD +G+G L+ +T GEK + +EVD+ +
Sbjct: 109 TMFLTIFGDRIAGTDEEDVIVNAFNLFD-EGDGKCKEETLKRSLTTWGEKFSQDEVDQAL 167
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARKMKD 163
EA ID GNG ID +F ++ + K+
Sbjct: 168 SEAPID--------GNGLIDIKKFAQILTKGAKE 193
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 79/148 (53%), Gaps = 8/148 (5%)
Query: 84 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 143
+ ++EI EAF +FD + +GF+ EL+ LG +L E+ ++I E D +G Y+
Sbjct: 20 EQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLXKYD 79
Query: 144 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD 203
+F + K+ D +EI+ AF++FD D G IS LR V LGE LTD
Sbjct: 80 --------DFYIVXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTD 131
Query: 204 EEVDEMIREADIDGDGQVNYEVYTIYCV 231
EE+ I E D+DGDG++N + C
Sbjct: 132 EELRAXIEEFDLDGDGEINENEFIAICT 159
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 70/142 (49%), Gaps = 18/142 (12%)
Query: 2 IEEYGSLLD--GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELF 59
I E SL D DG + EL ++LG + E+ D+I+E D++
Sbjct: 25 IYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSE------------- 71
Query: 60 VYHGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK 119
G + +F + K+ D +EI+ AF++FD D G IS LR V LGE
Sbjct: 72 ---GRHLXKYDDFYIVXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGET 128
Query: 120 LTDEEVDEMIREADIDGDGQVN 141
LTDEE+ I E D+DGDG++N
Sbjct: 129 LTDEELRAXIEEFDLDGDGEIN 150
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 84/153 (54%), Gaps = 28/153 (18%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
+G G ++T ++G ++ LG T++ ++ +I+E D GNG IDF
Sbjct: 26 EGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDP----------------FGNGDIDF 69
Query: 70 PEFLTMMAR----KMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 125
F + AR ++ ++E+REAFR++DK+GNG+IS +R ++ L E L+ E++
Sbjct: 70 DSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDL 129
Query: 126 DEMIREADIDGDGQVNYEGNGTIDFPEFLTMMA 158
D MI E D D G+GT+DF EF+ +M
Sbjct: 130 DAMIDEIDAD--------GSGTVDFEEFMGVMT 154
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 81/140 (57%), Gaps = 13/140 (9%)
Query: 92 AFRVFD-KDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGTIDF 150
AFR F+ +G+G +S ++ ++ LG + T + ++I E D GNG IDF
Sbjct: 18 AFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFD--------PFGNGDIDF 69
Query: 151 PEFLTMMAR----KMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 206
F + AR ++ ++E+REAFR++DK+GNG+IS +R ++ L E L+ E++
Sbjct: 70 DSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDL 129
Query: 207 DEMIREADIDGDGQVNYEVY 226
D MI E D DG G V++E +
Sbjct: 130 DAMIDEIDADGSGTVDFEEF 149
Score = 31.6 bits (70), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 173 AFRVFD-KDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTIYCV 231
AFR F+ +G+G +S ++ ++ LG + T + ++I E D G+G ++++ + I
Sbjct: 18 AFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGA 77
Query: 232 HIMG 235
+G
Sbjct: 78 RFLG 81
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 86/154 (55%), Gaps = 19/154 (12%)
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
P + + R+M +E++EAF + D+D +GFI +L+ + ++LG D+E++ M+
Sbjct: 5 PRRVKLSQRQM------QELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAML 58
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAE 189
+E G ++F FLT+ K+ TD E+ +R AF +FD+DG GFI
Sbjct: 59 KECP------------GQLNFTAFLTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDY 106
Query: 190 LRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 223
L+ ++ N+G+ + EE+ + ++A + + Q NY
Sbjct: 107 LKDLLENMGDNFSKEEIKNVWKDAPL-KNKQFNY 139
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 21/133 (15%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
D DG I ++L + SLG+ P + EL M+ E G ++F
Sbjct: 28 DRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKECP--------------------GQLNF 67
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
FLT+ K+ TD E+ +R AF +FD+DG GFI L+ ++ N+G+ + EE+ +
Sbjct: 68 TAFLTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVW 127
Query: 130 READIDGDGQVNY 142
++A + + Q NY
Sbjct: 128 KDAPL-KNKQFNY 139
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 77/136 (56%), Gaps = 17/136 (12%)
Query: 11 GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFP 70
GD IT ++G + R+LGQNPT AE+ ++ +E I F
Sbjct: 19 GDAKITASQVGDIARALGQNPTNAEINKILGNPSKEE--------------MNAAAITFE 64
Query: 71 EFLTMM--ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 128
EFL M+ A KD + E+ E RVFDK+GNG + AELRHV+ LGEK+T+EEV+E+
Sbjct: 65 EFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEEL 124
Query: 129 IREADIDGDGQVNYEG 144
++ + D +G +NYE
Sbjct: 125 MKGQE-DSNGCINYEA 139
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 91/152 (59%), Gaps = 12/152 (7%)
Query: 85 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEG 144
+ ++ +EAF +FD+ G+ I+A+++ + LG+ T+ E+++++ G+
Sbjct: 4 AADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKIL------GNPSKEEMN 57
Query: 145 NGTIDFPEFLTMM--ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLT 202
I F EFL M+ A KD + E+ E RVFDK+GNG + AELRHV+ LGEK+T
Sbjct: 58 AAAITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMT 117
Query: 203 DEEVDEMIREADIDGDGQVNYEVYTIYCVHIM 234
+EEV+E+++ + D +G +NYE + HIM
Sbjct: 118 EEEVEELMKGQE-DSNGCINYEAFV---KHIM 145
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 77/136 (56%), Gaps = 17/136 (12%)
Query: 11 GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFP 70
GD IT ++G + R+LGQNPT AE+ ++ +E I F
Sbjct: 21 GDAKITASQVGDIARALGQNPTNAEINKILGNPSKEE--------------MNAAAITFE 66
Query: 71 EFLTMM--ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 128
EFL M+ A KD + E+ E RVFDK+GNG + AELRHV+ LGEK+T+EEV+E+
Sbjct: 67 EFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEEL 126
Query: 129 IREADIDGDGQVNYEG 144
++ + D +G +NYE
Sbjct: 127 MKGQE-DSNGCINYEA 141
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 91/151 (60%), Gaps = 9/151 (5%)
Query: 85 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEG 144
+ ++ +EAF +FD+ G+ I+A+++ + LG+ T+ E+++++ G+
Sbjct: 6 AADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKIL------GNPSKEEMN 59
Query: 145 NGTIDFPEFLTMM--ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLT 202
I F EFL M+ A KD + E+ E RVFDK+GNG + AELRHV+ LGEK+T
Sbjct: 60 AAAITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMT 119
Query: 203 DEEVDEMIREADIDGDGQVNYEVYTIYCVHI 233
+EEV+E+++ + D +G +NYE + + + +
Sbjct: 120 EEEVEELMKGQE-DSNGCINYEAFVKHIMSV 149
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 80/137 (58%), Gaps = 19/137 (13%)
Query: 11 GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADE-NVESNLQYAELFVYHGNGTIDF 69
GD IT ++G ++R+LGQNPT AE+ ++ +E N + I F
Sbjct: 17 GDAKITLSQVGDIVRALGQNPTNAEINKILGNPSKEEMNAKK---------------ITF 61
Query: 70 PEFLTMM--ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 127
EFL M+ A KD + E+ E RVFDK+GNG + AELRHV+ LGEK+T+EEV+E
Sbjct: 62 EEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEE 121
Query: 128 MIREADIDGDGQVNYEG 144
+++ + D +G +NYE
Sbjct: 122 LMKGQE-DSNGCINYEA 137
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 90/152 (59%), Gaps = 9/152 (5%)
Query: 84 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 143
D + +EAF +FD+ G+ I+ +++ ++ LG+ T+ E+++++ G+
Sbjct: 1 DEINDFKEAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKIL------GNPSKEEM 54
Query: 144 GNGTIDFPEFLTMM--ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKL 201
I F EFL M+ A KD + E+ E RVFDK+GNG + AELRHV+ LGEK+
Sbjct: 55 NAKKITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKM 114
Query: 202 TDEEVDEMIREADIDGDGQVNYEVYTIYCVHI 233
T+EEV+E+++ + D +G +NYE + + + +
Sbjct: 115 TEEEVEELMKGQE-DSNGCINYEAFVKHIMSV 145
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 52/74 (70%), Gaps = 16/74 (21%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDG IT +EL TV+RSL QNPTE ELQDMI+EVDAD GNGTI+F
Sbjct: 22 DGDGCITVEELATVIRSLDQNPTEEELQDMISEVDAD----------------GNGTIEF 65
Query: 70 PEFLTMMARKMKDT 83
EFL++MA+K+KDT
Sbjct: 66 DEFLSLMAKKVKDT 79
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 57/83 (68%), Gaps = 11/83 (13%)
Query: 85 SEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 141
SEE+I +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D
Sbjct: 5 SEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDAD------ 58
Query: 142 YEGNGTIDFPEFLTMMARKMKDT 164
GNGTI+F EFL++MA+K+KDT
Sbjct: 59 --GNGTIEFDEFLSLMAKKVKDT 79
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 44/64 (68%), Gaps = 3/64 (4%)
Query: 166 SEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 222
SEE+I +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D DG+G +
Sbjct: 5 SEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIE 64
Query: 223 YEVY 226
++ +
Sbjct: 65 FDEF 68
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 138 GQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN 196
G + +G+G I E T++ R + +EEE+++ D DGNG I E +M
Sbjct: 17 GLFDKDGDGCITVEELATVI-RSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMAK 74
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 73/147 (49%), Gaps = 13/147 (8%)
Query: 87 EEIREAFRVFDKDGNGFISAAELRHVMTNLGE-KLTDEEVDEMIREADIDGDGQVNYEGN 145
E+ +EAF V D++ +G I +LR +G + +EE+D MI+EA +
Sbjct: 7 EDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA------------S 54
Query: 146 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 205
G I+F FLTM K+K D E+ I AF+V D DG G I + L ++T G + T EE
Sbjct: 55 GPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEE 114
Query: 206 VDEMIREADIDGDGQVNYEVYTIYCVH 232
+ M D G V+Y+ H
Sbjct: 115 IKNMWAAFPPDVAGNVDYKNICYVITH 141
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%)
Query: 60 VYHGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK 119
+ +G I+F FLTM K+K D E+ I AF+V D DG G I + L ++T G +
Sbjct: 50 IKEASGPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGR 109
Query: 120 LTDEEVDEMIREADIDGDGQVNYE 143
T EE+ M D G V+Y+
Sbjct: 110 FTPEEIKNMWAAFPPDVAGNVDYK 133
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 76/138 (55%), Gaps = 21/138 (15%)
Query: 7 SLLD--GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGN 64
SL D G G I +G ++R+ GQNPT AE+ ++ + + A+ ++E LQ V +
Sbjct: 12 SLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAEVDMEQFLQ-----VLNRP 66
Query: 65 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 124
D P EE + F+VFDKD G I ELR+V+T+LGEKL++EE
Sbjct: 67 NGFDMP-------------GDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEE 113
Query: 125 VDEMIREADIDGDGQVNY 142
+DE+++ + DG VNY
Sbjct: 114 MDELLKGVPVK-DGMVNY 130
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 74/136 (54%), Gaps = 15/136 (11%)
Query: 90 REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGTID 149
++AF +FD+ G G I + ++ G+ T E+ E+ E+ + + +D
Sbjct: 8 KQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEI--ESTLPAE----------VD 55
Query: 150 FPEFLTMMARK--MKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
+FL ++ R EE + F+VFDKD G I ELR+V+T+LGEKL++EE+D
Sbjct: 56 MEQFLQVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMD 115
Query: 208 EMIREADIDGDGQVNY 223
E+++ + DG VNY
Sbjct: 116 ELLKGVPVK-DGMVNY 130
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 73/147 (49%), Gaps = 13/147 (8%)
Query: 87 EEIREAFRVFDKDGNGFISAAELRHVMTNLGE-KLTDEEVDEMIREADIDGDGQVNYEGN 145
E+ +EAF V D++ +G I +LR +G + +EE+D MI+EA +
Sbjct: 25 EDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA------------S 72
Query: 146 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 205
G I+F FLTM K+K D E+ I AF+V D DG G I + L ++T G + T EE
Sbjct: 73 GPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEE 132
Query: 206 VDEMIREADIDGDGQVNYEVYTIYCVH 232
+ M D G V+Y+ H
Sbjct: 133 IKNMWAAFPPDVAGNVDYKNICYVITH 159
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 52 NLQYAEL--FVYHGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAEL 109
N++ EL + +G I+F FLTM K+K D E+ I AF+V D DG G I + L
Sbjct: 58 NVKNEELDAMIKEASGPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFL 117
Query: 110 RHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 143
++T G + T EE+ M D G V+Y+
Sbjct: 118 EELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYK 151
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 78/134 (58%), Gaps = 12/134 (8%)
Query: 11 GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAE-LFVYHGNGTIDF 69
G G I LG +R++G NPT +QD+IN +S+L+ A L + G I+
Sbjct: 17 GQGAIAKDSLGDYLRAIGYNPTNQLVQDIIN-------ADSSLRDASSLTLDQITGLIEV 69
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
E K K E+ +AF+VFDK+ G +S +LR+++T LGEKLTD EVDE++
Sbjct: 70 NEKELDATTKAK----TEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELL 125
Query: 130 READIDGDGQVNYE 143
+ ++D +G+++Y+
Sbjct: 126 KGVEVDSNGEIDYK 139
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 81/140 (57%), Gaps = 8/140 (5%)
Query: 90 REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGTID 149
++ F +FDK G G I+ L + +G T++ V ++I + D + + T+D
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDII-----NADSSLRDASSLTLD 61
Query: 150 FPEFLTMMARKMKDTDSE---EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 206
L + K D ++ E+ +AF+VFDK+ G +S +LR+++T LGEKLTD EV
Sbjct: 62 QITGLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEV 121
Query: 207 DEMIREADIDGDGQVNYEVY 226
DE+++ ++D +G+++Y+ +
Sbjct: 122 DELLKGVEVDSNGEIDYKKF 141
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 84/155 (54%), Gaps = 14/155 (9%)
Query: 85 SEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 141
SEEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++ ADID
Sbjct: 5 SEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS---- 60
Query: 142 YEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKL 201
GTID+ EF+ + + EE + AF FDKDG+G+I+ E++ + G L
Sbjct: 61 ----GTIDYGEFIAATVH-LNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFG--L 113
Query: 202 TDEEVDEMIREADIDGDGQVNYEVYTIYCVHIMGN 236
D +D+MI+E D D DGQ++Y + GN
Sbjct: 114 DDIHIDDMIKEIDQDNDGQIDYGEFAAMMRKRKGN 148
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 27/151 (17%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
D GTIT EL ++ +G E+E++D+++ D D++ GTID+
Sbjct: 22 DNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS----------------GTIDY 65
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
EF+ + + EE + AF FDKDG+G+I+ E++ + G L D +D+MI
Sbjct: 66 GEFIAATVH-LNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFG--LDDIHIDDMI 122
Query: 130 READIDGDGQVNYEGNGTIDFPEFLTMMARK 160
+E D D DGQ ID+ EF MM ++
Sbjct: 123 KEIDQDNDGQ--------IDYGEFAAMMRKR 145
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 62/92 (67%), Gaps = 4/92 (4%)
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
++F +FLT+M +KM + D++EEI +AF++FD D G IS L+ V LGE LTDEE+
Sbjct: 1 MNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQ 60
Query: 208 EMIREADIDGDGQVNYEVYTIYCVHIMGNTYL 239
EMI EAD DGDG+V+ + + + IM T L
Sbjct: 61 EMIDEADRDGDGEVSEQEF----LRIMKKTSL 88
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 62/93 (66%), Gaps = 8/93 (8%)
Query: 67 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 126
++F +FLT+M +KM + D++EEI +AF++FD D G IS L+ V LGE LTDEE+
Sbjct: 1 MNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQ 60
Query: 127 EMIREADIDGDGQVNYEGNGTIDFPEFLTMMAR 159
EMI EAD DGDG+V+ + EFL +M +
Sbjct: 61 EMIDEADRDGDGEVSEQ--------EFLRIMKK 85
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 16/69 (23%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
D G I+ K L V + LG+N T+ ELQ+MI+E D D G+G +
Sbjct: 33 DETGKISFKNLKRVAKELGENLTDEELQEMIDEADRD----------------GDGEVSE 76
Query: 70 PEFLTMMAR 78
EFL +M +
Sbjct: 77 QEFLRIMKK 85
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 49/71 (69%), Gaps = 16/71 (22%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDG IT +EL TV+RSL QNPTE ELQDMI+EVDAD GNGTI+F
Sbjct: 22 DGDGCITVEELATVIRSLDQNPTEEELQDMISEVDAD----------------GNGTIEF 65
Query: 70 PEFLTMMARKM 80
EFL++MA+K+
Sbjct: 66 DEFLSLMAKKV 76
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 54/80 (67%), Gaps = 11/80 (13%)
Query: 85 SEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 141
SEE+I +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D
Sbjct: 5 SEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDAD------ 58
Query: 142 YEGNGTIDFPEFLTMMARKM 161
GNGTI+F EFL++MA+K+
Sbjct: 59 --GNGTIEFDEFLSLMAKKV 76
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 44/64 (68%), Gaps = 3/64 (4%)
Query: 166 SEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 222
SEE+I +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D DG+G +
Sbjct: 5 SEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIE 64
Query: 223 YEVY 226
++ +
Sbjct: 65 FDEF 68
Score = 30.8 bits (68), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 58 LFVYHGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN 115
LF G+G I E T++ R + +EEE+++ D DGNG I E +M
Sbjct: 18 LFDKDGDGCITVEELATVI-RSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMAK 74
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 138 GQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN 196
G + +G+G I E T++ R + +EEE+++ D DGNG I E +M
Sbjct: 17 GLFDKDGDGCITVEELATVI-RSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMAK 74
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 13/154 (8%)
Query: 80 MKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGE-KLTDEEVDEMIREADIDGDG 138
M D ++ +EAF V D++ +G I +LR +G + +EE+D MI+EA
Sbjct: 5 MFDQTQIQDFKEAFTVIDQNRDGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA------ 58
Query: 139 QVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG 198
+G I+F FLTM K+K D E+ I AF+V D DG G I + L ++T
Sbjct: 59 ------SGPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTQC 112
Query: 199 EKLTDEEVDEMIREADIDGDGQVNYEVYTIYCVH 232
++ T EE+ M D G V+Y+ H
Sbjct: 113 DRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITH 146
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%)
Query: 60 VYHGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK 119
+ +G I+F FLTM K+K D E+ I AF+V D DG G I + L ++T ++
Sbjct: 55 IKEASGPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTQCDR 114
Query: 120 LTDEEVDEMIREADIDGDGQVNYE 143
T EE+ M D G V+Y+
Sbjct: 115 FTPEEIKNMWAAFPPDVAGNVDYK 138
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 89
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 46/71 (64%), Gaps = 16/71 (22%)
Query: 12 DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPE 71
DG+I+TKELG VMR LGQNPT ELQ+MI+EVD D G+GT+DF E
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDED----------------GSGTVDFDE 76
Query: 72 FLTMMARKMKD 82
FL MM R MKD
Sbjct: 77 FLVMMVRSMKD 87
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 43/77 (55%), Gaps = 9/77 (11%)
Query: 88 EIREAFRVFDKDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNG 146
E + AF +F +G IS EL VM LG+ T EE+ EMI E D D G+G
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDED--------GSG 70
Query: 147 TIDFPEFLTMMARKMKD 163
T+DF EFL MM R MKD
Sbjct: 71 TVDFDEFLVMMVRSMKD 87
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 169 EIREAFRVFDKDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYT 227
E + AF +F +G IS EL VM LG+ T EE+ EMI E D DG G V+++ +
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 228 IYCVHIM 234
+ V M
Sbjct: 79 VMMVRSM 85
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 46/71 (64%), Gaps = 16/71 (22%)
Query: 12 DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPE 71
DG+I+TKELG VMR LGQNPT ELQ+MI+EVD D G+GT+DF E
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDED----------------GSGTVDFDE 76
Query: 72 FLTMMARKMKD 82
FL MM R MKD
Sbjct: 77 FLVMMVRSMKD 87
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 43/77 (55%), Gaps = 9/77 (11%)
Query: 88 EIREAFRVFDKDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNG 146
E + AF +F +G IS EL VM LG+ T EE+ EMI E D D G+G
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDED--------GSG 70
Query: 147 TIDFPEFLTMMARKMKD 163
T+DF EFL MM R MKD
Sbjct: 71 TVDFDEFLVMMVRSMKD 87
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 169 EIREAFRVFDKDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYT 227
E + AF +F +G IS EL VM LG+ T EE+ EMI E D DG G V+++ +
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 228 IYCVHIM 234
+ V M
Sbjct: 79 VMMVRSM 85
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 46/71 (64%), Gaps = 16/71 (22%)
Query: 12 DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPE 71
DG+I+TKELG VMR LGQNPT ELQ+MI+EVD D G+GT+DF E
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDED----------------GSGTVDFDE 76
Query: 72 FLTMMARKMKD 82
FL MM R MKD
Sbjct: 77 FLVMMVRSMKD 87
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 43/77 (55%), Gaps = 9/77 (11%)
Query: 88 EIREAFRVFDKDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNG 146
E + AF +F +G IS EL VM LG+ T EE+ EMI E D D G+G
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDED--------GSG 70
Query: 147 TIDFPEFLTMMARKMKD 163
T+DF EFL MM R MKD
Sbjct: 71 TVDFDEFLVMMVRSMKD 87
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 169 EIREAFRVFDKDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYT 227
E + AF +F +G IS EL VM LG+ T EE+ EMI E D DG G V+++ +
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 228 IYCVHIM 234
+ V M
Sbjct: 79 VMMVRSM 85
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 46/71 (64%), Gaps = 16/71 (22%)
Query: 12 DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPE 71
DG I+TKELG VMR LGQNPT ELQ+MI+EVD D G+GT+DF E
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDED----------------GSGTVDFDE 76
Query: 72 FLTMMARKMKD 82
+L MMAR MKD
Sbjct: 77 WLVMMARCMKD 87
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 44/77 (57%), Gaps = 9/77 (11%)
Query: 88 EIREAFRVFDKDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNG 146
E + AF +F +G IS EL VM LG+ T EE+ EMI E D D G+G
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDED--------GSG 70
Query: 147 TIDFPEFLTMMARKMKD 163
T+DF E+L MMAR MKD
Sbjct: 71 TVDFDEWLVMMARCMKD 87
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 169 EIREAFRVFDKDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYT 227
E + AF +F +G IS EL VM LG+ T EE+ EMI E D DG G V+++ +
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWL 78
Query: 228 IYCVHIM 234
+ M
Sbjct: 79 VMMARCM 85
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 78/144 (54%), Gaps = 27/144 (18%)
Query: 7 SLLDG-DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNG 65
+ DG DG + +LG V R LG NP +E+V + ++ G
Sbjct: 19 AFWDGRDGAVDAFKLGDVCRCLGINPR-------------NEDVFAVGGTHKM----GEK 61
Query: 66 TIDFPEFLTMMARKMKDTDSEE----EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLT 121
++ F EFL M D E+ + EAF+ FD++G GFIS AELRHV+T LGE+L+
Sbjct: 62 SLPFEEFLPAYEGLM---DCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLS 118
Query: 122 DEEVDEMIREADI--DGDGQVNYE 143
DE+VDE+I+ D+ D +G V YE
Sbjct: 119 DEDVDEIIKLTDLQEDLEGNVKYE 142
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 87/163 (53%), Gaps = 23/163 (14%)
Query: 84 DSEEEIREAFRVFD-KDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 141
D +++++ F +F DG +G + A +L V LG +E+V + G +
Sbjct: 6 DEIDDLKDVFELFAFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV---------GGTH 56
Query: 142 YEGNGTIDFPEFLTMMARKMKDTDSEE----EIREAFRVFDKDGNGFISAAELRHVMTNL 197
G ++ F EFL M D E+ + EAF+ FD++G GFIS AELRHV+T L
Sbjct: 57 KMGEKSLPFEEFLPAYEGLM---DCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTAL 113
Query: 198 GEKLTDEEVDEMIREADI--DGDGQVNYEVYTIYCVHIMGNTY 238
GE+L+DE+VDE+I+ D+ D +G V YE + +M Y
Sbjct: 114 GERLSDEDVDEIIKLTDLQEDLEGNVKYEDFV---KKVMAGPY 153
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 45/71 (63%), Gaps = 16/71 (22%)
Query: 12 DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPE 71
DG I+TKELG VMR LGQNPT ELQ+MI+EVD D G+GT+DF E
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDED----------------GSGTVDFDE 76
Query: 72 FLTMMARKMKD 82
FL MM R MKD
Sbjct: 77 FLVMMVRCMKD 87
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 44/77 (57%), Gaps = 9/77 (11%)
Query: 88 EIREAFRVFDKDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNG 146
E + AF +F + +G IS EL VM LG+ T EE+ EMI E D D G+G
Sbjct: 19 EFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDED--------GSG 70
Query: 147 TIDFPEFLTMMARKMKD 163
T+DF EFL MM R MKD
Sbjct: 71 TVDFDEFLVMMVRCMKD 87
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 169 EIREAFRVFDKDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYT 227
E + AF +F + +G IS EL VM LG+ T EE+ EMI E D DG G V+++ +
Sbjct: 19 EFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 228 IYCVHIM 234
+ V M
Sbjct: 79 VMMVRCM 85
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 45/71 (63%), Gaps = 16/71 (22%)
Query: 12 DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPE 71
DG I+TKELG VMR LGQNPT ELQ+MI+EVD D G+GT+DF E
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDED----------------GSGTVDFDE 76
Query: 72 FLTMMARKMKD 82
FL MM R MKD
Sbjct: 77 FLVMMVRCMKD 87
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 45/77 (58%), Gaps = 9/77 (11%)
Query: 88 EIREAFRVFDKDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNG 146
E + AF +F +D +G IS EL VM LG+ T EE+ EMI E D D G+G
Sbjct: 19 EFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDED--------GSG 70
Query: 147 TIDFPEFLTMMARKMKD 163
T+DF EFL MM R MKD
Sbjct: 71 TVDFDEFLVMMVRCMKD 87
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 169 EIREAFRVFDKDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYT 227
E + AF +F +D +G IS EL VM LG+ T EE+ EMI E D DG G V+++ +
Sbjct: 19 EFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 228 IYCVHIM 234
+ V M
Sbjct: 79 VMMVRCM 85
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac
Troponin-I(147- 163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain
Of Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 45/71 (63%), Gaps = 16/71 (22%)
Query: 12 DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPE 71
DG I+TKELG VMR LGQNPT ELQ+MI+EVD D G+GT+DF E
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDED----------------GSGTVDFDE 76
Query: 72 FLTMMARKMKD 82
FL MM R MKD
Sbjct: 77 FLVMMVRCMKD 87
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 43/77 (55%), Gaps = 9/77 (11%)
Query: 88 EIREAFRVFDKDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNG 146
E + AF +F +G IS EL VM LG+ T EE+ EMI E D D G+G
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDED--------GSG 70
Query: 147 TIDFPEFLTMMARKMKD 163
T+DF EFL MM R MKD
Sbjct: 71 TVDFDEFLVMMVRCMKD 87
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 169 EIREAFRVFDKDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYT 227
E + AF +F +G IS EL VM LG+ T EE+ EMI E D DG G V+++ +
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 228 IYCVHIM 234
+ V M
Sbjct: 79 VMMVRCM 85
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 88/163 (53%), Gaps = 23/163 (14%)
Query: 84 DSEEEIREAFRVFD-KDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 141
D +++++ F +FD DG +G + A +L V LG +E+V + G +
Sbjct: 6 DEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV---------GGTH 56
Query: 142 YEGNGTIDFPEFLTMMARKMKDTDSEE----EIREAFRVFDKDGNGFISAAELRHVMTNL 197
G ++ F EFL M D E+ + EAF+ FD++G GFIS AELRHV+T L
Sbjct: 57 KMGEKSLPFEEFLPAYEGLM---DCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTAL 113
Query: 198 GEKLTDEEVDEMIREADI--DGDGQVNYEVYTIYCVHIMGNTY 238
GE+L+DE+VDE+I+ D+ D +G V YE + +M Y
Sbjct: 114 GERLSDEDVDEIIKLTDLQEDLEGNVKYEDFV---KKVMAGPY 153
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 75/138 (54%), Gaps = 26/138 (18%)
Query: 12 DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPE 71
DG + +LG V R LG NP +E+V + ++ G ++ F E
Sbjct: 25 DGAVDAFKLGDVCRCLGINPR-------------NEDVFAVGGTHKM----GEKSLPFEE 67
Query: 72 FLTMMARKMKDTDSEE----EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 127
FL M D E+ + EAF+ FD++G GFIS AELRHV+T LGE+L+DE+VDE
Sbjct: 68 FLPAYEGLM---DCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDE 124
Query: 128 MIREADI--DGDGQVNYE 143
+I+ D+ D +G V YE
Sbjct: 125 IIKLTDLQEDLEGNVKYE 142
Score = 30.8 bits (68), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 29/46 (63%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQY 55
+G G I+ EL V+ +LG+ ++ ++ ++I D E++E N++Y
Sbjct: 96 EGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKY 141
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin
C At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 45/71 (63%), Gaps = 16/71 (22%)
Query: 12 DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPE 71
DG I+TKELG VMR LGQNPT ELQ+MI+EVD D G+GT+DF E
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDED----------------GSGTVDFDE 76
Query: 72 FLTMMARKMKD 82
FL MM R MKD
Sbjct: 77 FLVMMVRCMKD 87
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 45/77 (58%), Gaps = 9/77 (11%)
Query: 88 EIREAFRVFDKDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNG 146
E + AF +F +D +G IS EL VM LG+ T EE+ EMI E D D G+G
Sbjct: 19 EFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDED--------GSG 70
Query: 147 TIDFPEFLTMMARKMKD 163
T+DF EFL MM R MKD
Sbjct: 71 TVDFDEFLVMMVRCMKD 87
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 169 EIREAFRVFDKDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYT 227
E + AF +F +D +G IS EL VM LG+ T EE+ EMI E D DG G V+++ +
Sbjct: 19 EFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 228 IYCVHIM 234
+ V M
Sbjct: 79 VMMVRCM 85
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 75/138 (54%), Gaps = 26/138 (18%)
Query: 12 DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPE 71
DG + +LG V R LG NP +E+V + ++ G ++ F E
Sbjct: 23 DGAVDAFKLGDVCRCLGINPR-------------NEDVFAVGGTHKM----GEKSLPFEE 65
Query: 72 FLTMMARKMKDTDSEE----EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 127
FL M D E+ + EAF+ FD++G GFIS AELRHV+T LGE+L+DE+VDE
Sbjct: 66 FLPAYEGLM---DCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDE 122
Query: 128 MIREADI--DGDGQVNYE 143
+I+ D+ D +G V YE
Sbjct: 123 IIKLTDLQEDLEGNVKYE 140
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 88/163 (53%), Gaps = 23/163 (14%)
Query: 84 DSEEEIREAFRVFD-KDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 141
D +++++ F +FD DG +G + A +L V LG +E+V + G +
Sbjct: 4 DEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV---------GGTH 54
Query: 142 YEGNGTIDFPEFLTMMARKMKDTDSEE----EIREAFRVFDKDGNGFISAAELRHVMTNL 197
G ++ F EFL M D E+ + EAF+ FD++G GFIS AELRHV+T L
Sbjct: 55 KMGEKSLPFEEFLPAYEGLM---DCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTAL 111
Query: 198 GEKLTDEEVDEMIREADI--DGDGQVNYEVYTIYCVHIMGNTY 238
GE+L+DE+VDE+I+ D+ D +G V YE + +M Y
Sbjct: 112 GERLSDEDVDEIIKLTDLQEDLEGNVKYEDFV---KKVMAGPY 151
Score = 30.8 bits (68), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 29/46 (63%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQY 55
+G G I+ EL V+ +LG+ ++ ++ ++I D E++E N++Y
Sbjct: 94 EGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKY 139
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 88/163 (53%), Gaps = 23/163 (14%)
Query: 84 DSEEEIREAFRVFD-KDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 141
D +++++ F +FD DG +G + A +L V LG +E+V + G +
Sbjct: 6 DEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV---------GGTH 56
Query: 142 YEGNGTIDFPEFLTMMARKMKDTDSEE----EIREAFRVFDKDGNGFISAAELRHVMTNL 197
G ++ F EFL M D E+ + EAF+ FD++G GFIS AELRHV+T L
Sbjct: 57 KMGEKSLPFEEFLPAYEGLM---DCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTAL 113
Query: 198 GEKLTDEEVDEMIREADI--DGDGQVNYEVYTIYCVHIMGNTY 238
GE+L+DE+VDE+I+ D+ D +G V YE + +M Y
Sbjct: 114 GERLSDEDVDEIIKLTDLQEDLEGNVKYEDFV---KKVMAGPY 153
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 75/138 (54%), Gaps = 26/138 (18%)
Query: 12 DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPE 71
DG + +LG V R LG NP +E+V + ++ G ++ F E
Sbjct: 25 DGAVDAFKLGDVCRCLGINPR-------------NEDVFAVGGTHKM----GEKSLPFEE 67
Query: 72 FLTMMARKMKDTDSEE----EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 127
FL M D E+ + EAF+ FD++G GFIS AELRHV+T LGE+L+DE+VDE
Sbjct: 68 FLPAYEGLM---DCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDE 124
Query: 128 MIREADI--DGDGQVNYE 143
+I+ D+ D +G V YE
Sbjct: 125 IIKLTDLQEDLEGNVKYE 142
Score = 30.8 bits (68), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 29/46 (63%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQY 55
+G G I+ EL V+ +LG+ ++ ++ ++I D E++E N++Y
Sbjct: 96 EGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKY 141
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 75/138 (54%), Gaps = 26/138 (18%)
Query: 12 DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPE 71
DG + +LG V R LG NP +E+V + ++ G ++ F E
Sbjct: 22 DGAVDAFKLGDVCRCLGINPR-------------NEDVFAVGGTHKM----GEKSLPFEE 64
Query: 72 FLTMMARKMKDTDSEE----EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 127
FL M D E+ + EAF+ FD++G GFIS AELRHV+T LGE+L+DE+VDE
Sbjct: 65 FLPAYEGLM---DCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDE 121
Query: 128 MIREADI--DGDGQVNYE 143
+I+ D+ D +G V YE
Sbjct: 122 IIKLTDLQEDLEGNVKYE 139
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 88/163 (53%), Gaps = 23/163 (14%)
Query: 84 DSEEEIREAFRVFD-KDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 141
D +++++ F +FD DG +G + A +L V LG +E+V + G +
Sbjct: 3 DEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV---------GGTH 53
Query: 142 YEGNGTIDFPEFLTMMARKMKDTDSEE----EIREAFRVFDKDGNGFISAAELRHVMTNL 197
G ++ F EFL M D E+ + EAF+ FD++G GFIS AELRHV+T L
Sbjct: 54 KMGEKSLPFEEFLPAYEGLM---DCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTAL 110
Query: 198 GEKLTDEEVDEMIREADI--DGDGQVNYEVYTIYCVHIMGNTY 238
GE+L+DE+VDE+I+ D+ D +G V YE + +M Y
Sbjct: 111 GERLSDEDVDEIIKLTDLQEDLEGNVKYEDFV---KKVMAGPY 150
Score = 30.8 bits (68), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 29/46 (63%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQY 55
+G G I+ EL V+ +LG+ ++ ++ ++I D E++E N++Y
Sbjct: 93 EGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKY 138
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 81/149 (54%), Gaps = 14/149 (9%)
Query: 84 DSEEEIREAFRVFD-KDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 141
D ++++E F +FD DG +G + A ++ V LG R D+ G +
Sbjct: 7 DEIDDLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGIN---------PRNEDVFAVGGTH 57
Query: 142 YEGNGTIDFPEFLTMMARKMK-DTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK 200
G ++ F EFL M + + + EAF+ FD++G GFIS AELRHV++ LGE+
Sbjct: 58 KMGEKSLPFEEFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGER 117
Query: 201 LTDEEVDEMIREADI--DGDGQVNYEVYT 227
L+DEEVDE+I D+ D +G V YE +
Sbjct: 118 LSDEEVDEIINLTDLQEDLEGNVKYEEFV 146
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 70/135 (51%), Gaps = 20/135 (14%)
Query: 12 DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPE 71
DG + ++G V R LG NP + + V + G ++ F E
Sbjct: 26 DGAVDAFKIGDVCRCLGINPRNED----VFAVGGTHKM-------------GEKSLPFEE 68
Query: 72 FLTMMARKMK-DTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIR 130
FL M + + + EAF+ FD++G GFIS AELRHV++ LGE+L+DEEVDE+I
Sbjct: 69 FLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIIN 128
Query: 131 EADI--DGDGQVNYE 143
D+ D +G V YE
Sbjct: 129 LTDLQEDLEGNVKYE 143
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAEL 58
+G G I+ EL V+ LG+ ++ E+ ++IN D E++E N++Y E
Sbjct: 97 EGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEF 145
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 75/138 (54%), Gaps = 26/138 (18%)
Query: 12 DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPE 71
DG + +LG V R LG NP +E+V + ++ G ++ F E
Sbjct: 22 DGAVDAFKLGDVCRCLGINPR-------------NEDVFAVGGTHKM----GEKSLPFEE 64
Query: 72 FLTMMARKMKDTDSEE----EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 127
FL M D E+ + EAF+ FD++G GFIS AELRHV+T LGE+L+DE+VDE
Sbjct: 65 FLPAYEGLM---DCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDE 121
Query: 128 MIREADI--DGDGQVNYE 143
+I+ D+ D +G V YE
Sbjct: 122 IIKLTDLQEDLEGNVKYE 139
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 85/152 (55%), Gaps = 20/152 (13%)
Query: 84 DSEEEIREAFRVFD-KDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 141
D +++++ F +FD DG +G + A +L V LG +E+V + G +
Sbjct: 3 DEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV---------GGTH 53
Query: 142 YEGNGTIDFPEFLTMMARKMKDTDSEE----EIREAFRVFDKDGNGFISAAELRHVMTNL 197
G ++ F EFL M D E+ + EAF+ FD++G GFIS AELRHV+T L
Sbjct: 54 KMGEKSLPFEEFLPAYEGLM---DCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTAL 110
Query: 198 GEKLTDEEVDEMIREADI--DGDGQVNYEVYT 227
GE+L+DE+VDE+I+ D+ D +G V YE +
Sbjct: 111 GERLSDEDVDEIIKLTDLQEDLEGNVKYEDFV 142
Score = 30.8 bits (68), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 29/46 (63%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQY 55
+G G I+ EL V+ +LG+ ++ ++ ++I D E++E N++Y
Sbjct: 93 EGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKY 138
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 83/149 (55%), Gaps = 14/149 (9%)
Query: 84 DSEEEIREAFRVFD-KDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 141
D ++++E F +FD DG +G + A ++ V LG +E+V + G +
Sbjct: 6 DEIDDLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRNEDVFAV---------GGTH 56
Query: 142 YEGNGTIDFPEFLTMMARKMK-DTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK 200
G ++ F EFL M + + + EAF+ FD++G GFIS AELRHV++ LGE+
Sbjct: 57 KMGEKSLPFEEFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGER 116
Query: 201 LTDEEVDEMIREADI--DGDGQVNYEVYT 227
L+DEEVDE+I D+ D +G V YE +
Sbjct: 117 LSDEEVDEIINLTDLQEDLEGNVKYEEFV 145
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 70/135 (51%), Gaps = 20/135 (14%)
Query: 12 DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPE 71
DG + ++G V R LG NP + + V + G ++ F E
Sbjct: 25 DGAVDAFKIGDVCRCLGINPRNED----VFAVGGTHKM-------------GEKSLPFEE 67
Query: 72 FLTMMARKMK-DTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIR 130
FL M + + + EAF+ FD++G GFIS AELRHV++ LGE+L+DEEVDE+I
Sbjct: 68 FLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIIN 127
Query: 131 EADI--DGDGQVNYE 143
D+ D +G V YE
Sbjct: 128 LTDLQEDLEGNVKYE 142
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAEL 58
+G G I+ EL V+ LG+ ++ E+ ++IN D E++E N++Y E
Sbjct: 96 EGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEF 144
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 87/163 (53%), Gaps = 23/163 (14%)
Query: 84 DSEEEIREAFRVFD-KDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 141
D +++++ F +FD DG +G + A +L V LG +E+V + G +
Sbjct: 6 DEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV---------GGTH 56
Query: 142 YEGNGTIDFPEFLTMMARKMKDTDSEE----EIREAFRVFDKDGNGFISAAELRHVMTNL 197
G ++ F EFL M D E+ + EAF+ FD++G GFIS AELRHV++ L
Sbjct: 57 KMGEKSLPFEEFLPAYEGLM---DCEQGTFADYMEAFKTFDREGQGFISGAELRHVLSGL 113
Query: 198 GEKLTDEEVDEMIREADI--DGDGQVNYEVYTIYCVHIMGNTY 238
GE+L+DEEVDE+I D+ D +G V YE + +M Y
Sbjct: 114 GERLSDEEVDEIINLTDLQEDLEGNVKYEEFV---KKVMAGPY 153
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 71/138 (51%), Gaps = 26/138 (18%)
Query: 12 DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPE 71
DG + +LG V R LG NP + + V + G ++ F E
Sbjct: 25 DGAVDAFKLGDVCRCLGINPRNED----VFAVGGTHKM-------------GEKSLPFEE 67
Query: 72 FLTMMARKMKDTDSEE----EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 127
FL M D E+ + EAF+ FD++G GFIS AELRHV++ LGE+L+DEEVDE
Sbjct: 68 FLPAYEGLM---DCEQGTFADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDE 124
Query: 128 MIREADI--DGDGQVNYE 143
+I D+ D +G V YE
Sbjct: 125 IINLTDLQEDLEGNVKYE 142
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAEL 58
+G G I+ EL V+ LG+ ++ E+ ++IN D E++E N++Y E
Sbjct: 96 EGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEF 144
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 45/71 (63%), Gaps = 16/71 (22%)
Query: 12 DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPE 71
DG I+TKELG VMR LGQNPT ELQ+MI+EVD D G+GT+DF E
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDED----------------GSGTVDFDE 76
Query: 72 FLTMMARKMKD 82
+L MM R MKD
Sbjct: 77 WLVMMVRCMKD 87
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 43/77 (55%), Gaps = 9/77 (11%)
Query: 88 EIREAFRVFDKDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNG 146
E + AF +F +G IS EL VM LG+ T EE+ EMI E D D G+G
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDED--------GSG 70
Query: 147 TIDFPEFLTMMARKMKD 163
T+DF E+L MM R MKD
Sbjct: 71 TVDFDEWLVMMVRCMKD 87
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 169 EIREAFRVFDKDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYT 227
E + AF +F +G IS EL VM LG+ T EE+ EMI E D DG G V+++ +
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWL 78
Query: 228 IYCVHIM 234
+ V M
Sbjct: 79 VMMVRCM 85
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 51/87 (58%), Gaps = 21/87 (24%)
Query: 1 MIEEYGSLLD-----GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQY 55
MI E+ + D G G I+TKELGTVMR LGQNPT+ EL +I EVD D
Sbjct: 18 MIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDED--------- 68
Query: 56 AELFVYHGNGTIDFPEFLTMMARKMKD 82
G+GTIDF EFL MM R+MK+
Sbjct: 69 -------GSGTIDFEEFLVMMVRQMKE 88
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 45/76 (59%), Gaps = 8/76 (10%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E + AF +FD DG G IS EL VM LG+ T E+D +I E D D G+GT
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDED--------GSGT 72
Query: 148 IDFPEFLTMMARKMKD 163
IDF EFL MM R+MK+
Sbjct: 73 IDFEEFLVMMVRQMKE 88
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 38/66 (57%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
E + AF +FD DG G IS EL VM LG+ T E+D +I E D DG G +++E + +
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFEEFLV 80
Query: 229 YCVHIM 234
V M
Sbjct: 81 MMVRQM 86
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 50/74 (67%), Gaps = 8/74 (10%)
Query: 87 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNG 146
E+++ AFR FD+DG+G I+ ELR M LG+ L EE+D MIREAD+D DG+VNYE
Sbjct: 6 EDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYE--- 62
Query: 147 TIDFPEFLTMMARK 160
EF M+A++
Sbjct: 63 -----EFARMLAQE 71
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 44/60 (73%)
Query: 168 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYT 227
E+++ AFR FD+DG+G I+ ELR M LG+ L EE+D MIREAD+D DG+VNYE +
Sbjct: 6 EDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFA 65
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 16/70 (22%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DGDG IT EL M LGQ + EL MI E D D+ +G +++
Sbjct: 18 DGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQ----------------DGRVNY 61
Query: 70 PEFLTMMARK 79
EF M+A++
Sbjct: 62 EEFARMLAQE 71
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain
Of Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr,
40 Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle,
Nmr, Minimized Average Structure
Length = 90
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 51/87 (58%), Gaps = 21/87 (24%)
Query: 1 MIEEYGSLLD-----GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQY 55
MI E+ + D G G I+TKELGTVMR LGQNPT+ EL +I EVD D
Sbjct: 18 MIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDED--------- 68
Query: 56 AELFVYHGNGTIDFPEFLTMMARKMKD 82
G+GTIDF EFL MM R+MK+
Sbjct: 69 -------GSGTIDFEEFLVMMVRQMKE 88
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%), Gaps = 8/76 (10%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E + AF +FD DG G IS EL VM LG+ T EE+D +I E D D G+GT
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDED--------GSGT 72
Query: 148 IDFPEFLTMMARKMKD 163
IDF EFL MM R+MK+
Sbjct: 73 IDFEEFLVMMVRQMKE 88
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
E + AF +FD DG G IS EL VM LG+ T EE+D +I E D DG G +++E + +
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 229 YCVHIM 234
V M
Sbjct: 81 MMVRQM 86
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 82/156 (52%), Gaps = 14/156 (8%)
Query: 71 EFLTMMARKMKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 127
+F R + ++ SEEEI +E F D D +G I+ EL+ + +G L + E+ +
Sbjct: 8 KFKKXALRVIAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILD 67
Query: 128 MIREADIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISA 187
+ + AD+D GTID+ EF+ + + E+ + AF FDKDG+G+I+
Sbjct: 68 LXQAADVDNS--------GTIDYKEFIAATLH-LNKIEREDHLFAAFTYFDKDGSGYITP 118
Query: 188 AELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 223
EL+ G + D ++E+ R+ D D DG+++Y
Sbjct: 119 DELQQACEEFG--VEDVRIEELXRDVDQDNDGRIDY 152
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 19/133 (14%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
D G IT +EL ++ +G N E+E+ D+ D D +GTID+
Sbjct: 39 DKSGQITFEELKAGLKRVGANLKESEILDLXQAADVD----------------NSGTIDY 82
Query: 70 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 129
EF+ + + E+ + AF FDKDG+G+I+ EL+ G + D ++E+
Sbjct: 83 KEFIAATLH-LNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFG--VEDVRIEELX 139
Query: 130 READIDGDGQVNY 142
R+ D D DG+++Y
Sbjct: 140 RDVDQDNDGRIDY 152
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 152 EFLTMMARKMKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 208
+F R + ++ SEEEI +E F D D +G I+ EL+ + +G L + E+ +
Sbjct: 8 KFKKXALRVIAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILD 67
Query: 209 MIREADIDGDGQVNYEVYTIYCVHI 233
+ + AD+D G ++Y+ + +H+
Sbjct: 68 LXQAADVDNSGTIDYKEFIAATLHL 92
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 79/137 (57%), Gaps = 13/137 (9%)
Query: 87 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNG 146
+E++EAF + D++ +GFI +L+ ++LG D+E+ M++EA G
Sbjct: 2 QEMKEAFTMIDQNRDGFIDINDLKEEFSSLGRTPDDKELTAMLKEAP------------G 49
Query: 147 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 206
++F FL++ + K+ TDSEE IR AF +FD+D ++ ++ ++ N+G+ +E+
Sbjct: 50 PLNFTMFLSIFSDKLSGTDSEETIRNAFGMFDEDATKKLNIEYIKDLLENMGDNFNKDEM 109
Query: 207 DEMIREADIDGDGQVNY 223
+EA ++G G+ +Y
Sbjct: 110 RMTFKEAPVEG-GKFDY 125
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 21/131 (16%)
Query: 12 DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPE 71
DG I +L SLG+ P + EL M+ E G ++F
Sbjct: 16 DGFIDINDLKEEFSSLGRTPDDKELTAMLKE--------------------APGPLNFTM 55
Query: 72 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRE 131
FL++ + K+ TDSEE IR AF +FD+D ++ ++ ++ N+G+ +E+ +E
Sbjct: 56 FLSIFSDKLSGTDSEETIRNAFGMFDEDATKKLNIEYIKDLLENMGDNFNKDEMRMTFKE 115
Query: 132 ADIDGDGQVNY 142
A ++G G+ +Y
Sbjct: 116 APVEG-GKFDY 125
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 139
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 79/141 (56%), Gaps = 13/141 (9%)
Query: 87 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNG 146
+E++EAF + D D +GF+S +++ + LG D+E+ M++EA G
Sbjct: 7 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAP------------G 54
Query: 147 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 206
++F FL++ + K+ TDSEE IR AF +FD+ ++ ++ ++ N+G+ +E+
Sbjct: 55 PLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEM 114
Query: 207 DEMIREADIDGDGQVNYEVYT 227
+EA ++G G+ +Y +T
Sbjct: 115 RMTFKEAPVEG-GKFDYVKFT 134
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 67/134 (50%), Gaps = 21/134 (15%)
Query: 9 LDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTID 68
+D DG ++ +++ + LG+ P + EL M+ E G ++
Sbjct: 18 VDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE--------------------APGPLN 57
Query: 69 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 128
F FL++ + K+ TDSEE IR AF +FD+ ++ ++ ++ N+G+ +E+
Sbjct: 58 FTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMT 117
Query: 129 IREADIDGDGQVNY 142
+EA ++G G+ +Y
Sbjct: 118 FKEAPVEG-GKFDY 130
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 79/141 (56%), Gaps = 13/141 (9%)
Query: 87 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNG 146
+E++EAF + D D +GF+S +++ + LG D+E+ M++EA G
Sbjct: 6 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAP------------G 53
Query: 147 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 206
++F FL++ + K+ TDSEE IR AF +FD+ ++ ++ ++ N+G+ +E+
Sbjct: 54 PLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEM 113
Query: 207 DEMIREADIDGDGQVNYEVYT 227
+EA ++G G+ +Y +T
Sbjct: 114 RMTFKEAPVEG-GKFDYVKFT 133
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 67/134 (50%), Gaps = 21/134 (15%)
Query: 9 LDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTID 68
+D DG ++ +++ + LG+ P + EL M+ E G ++
Sbjct: 17 VDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE--------------------APGPLN 56
Query: 69 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 128
F FL++ + K+ TDSEE IR AF +FD+ ++ ++ ++ N+G+ +E+
Sbjct: 57 FTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMT 116
Query: 129 IREADIDGDGQVNY 142
+EA ++G G+ +Y
Sbjct: 117 FKEAPVEG-GKFDY 129
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 79/141 (56%), Gaps = 13/141 (9%)
Query: 87 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNG 146
+E++EAF + D D +GF+S +++ + LG D+E+ M++EA G
Sbjct: 4 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAP------------G 51
Query: 147 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 206
++F FL++ + K+ TDSEE IR AF +FD+ ++ ++ ++ N+G+ +E+
Sbjct: 52 PLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEM 111
Query: 207 DEMIREADIDGDGQVNYEVYT 227
+EA ++G G+ +Y +T
Sbjct: 112 RMTFKEAPVEG-GKFDYVKFT 131
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 67/134 (50%), Gaps = 21/134 (15%)
Query: 9 LDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTID 68
+D DG ++ +++ + LG+ P + EL M+ E G ++
Sbjct: 15 VDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE--------------------APGPLN 54
Query: 69 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 128
F FL++ + K+ TDSEE IR AF +FD+ ++ ++ ++ N+G+ +E+
Sbjct: 55 FTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMT 114
Query: 129 IREADIDGDGQVNY 142
+EA ++G G+ +Y
Sbjct: 115 FKEAPVEG-GKFDY 127
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal
Muscle Troponin-C
Length = 76
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 45/72 (62%), Gaps = 16/72 (22%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DG G I+TKELGTVMR LGQNPT+ EL +I EVD D G+GTIDF
Sbjct: 21 DGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDED----------------GSGTIDF 64
Query: 70 PEFLTMMARKMK 81
EFL MM R+MK
Sbjct: 65 EEFLVMMVRQMK 76
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E + AF +FD DG G IS EL VM LG+ T EE+D +I E D D G+GT
Sbjct: 10 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDED--------GSGT 61
Query: 148 IDFPEFLTMMARKMK 162
IDF EFL MM R+MK
Sbjct: 62 IDFEEFLVMMVRQMK 76
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
E + AF +FD DG G IS EL VM LG+ T EE+D +I E D DG G +++E + +
Sbjct: 10 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 69
Query: 229 YCVHIM 234
V M
Sbjct: 70 MMVRQM 75
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 79/141 (56%), Gaps = 13/141 (9%)
Query: 87 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNG 146
+E++EAF + D D +GF+S +++ + LG D+E+ M++EA G
Sbjct: 7 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAP------------G 54
Query: 147 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 206
++F FL++ + K+ TDSEE IR AF +FD+ ++ ++ ++ N+G+ +E+
Sbjct: 55 PLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEM 114
Query: 207 DEMIREADIDGDGQVNYEVYT 227
+EA ++G G+ +Y +T
Sbjct: 115 RMTFKEAPVEG-GKFDYVKFT 134
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 67/134 (50%), Gaps = 21/134 (15%)
Query: 9 LDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTID 68
+D DG ++ +++ + LG+ P + EL M+ E G ++
Sbjct: 18 VDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE--------------------APGPLN 57
Query: 69 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 128
F FL++ + K+ TDSEE IR AF +FD+ ++ ++ ++ N+G+ +E+
Sbjct: 58 FTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMT 117
Query: 129 IREADIDGDGQVNY 142
+EA ++G G+ +Y
Sbjct: 118 FKEAPVEG-GKFDY 130
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 79/141 (56%), Gaps = 13/141 (9%)
Query: 87 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNG 146
+E++EAF + D D +GF+S +++ + LG D+E+ M++EA G
Sbjct: 18 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAP------------G 65
Query: 147 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 206
++F FL++ + K+ TDSEE IR AF +FD+ ++ ++ ++ N+G+ +E+
Sbjct: 66 PLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEM 125
Query: 207 DEMIREADIDGDGQVNYEVYT 227
+EA ++G G+ +Y +T
Sbjct: 126 RMTFKEAPVEG-GKFDYVKFT 145
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 67/134 (50%), Gaps = 21/134 (15%)
Query: 9 LDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTID 68
+D DG ++ +++ + LG+ P + EL M+ E G ++
Sbjct: 29 VDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE--------------------APGPLN 68
Query: 69 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 128
F FL++ + K+ TDSEE IR AF +FD+ ++ ++ ++ N+G+ +E+
Sbjct: 69 FTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMT 128
Query: 129 IREADIDGDGQVNY 142
+EA ++G G+ +Y
Sbjct: 129 FKEAPVEG-GKFDY 141
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 21/87 (24%)
Query: 1 MIEEYGSLLD-----GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQY 55
MI E+ + D G G I+TK LGTVMR LGQNPT+ EL +I EVD D
Sbjct: 18 MIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDED--------- 68
Query: 56 AELFVYHGNGTIDFPEFLTMMARKMKD 82
G+GTIDF EFL MM R+MK+
Sbjct: 69 -------GSGTIDFEEFLVMMVRQMKE 88
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 45/76 (59%), Gaps = 8/76 (10%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E + AF +FD DG G IS L VM LG+ T EE+D +I E D D G+GT
Sbjct: 21 EFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDED--------GSGT 72
Query: 148 IDFPEFLTMMARKMKD 163
IDF EFL MM R+MK+
Sbjct: 73 IDFEEFLVMMVRQMKE 88
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 38/66 (57%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
E + AF +FD DG G IS L VM LG+ T EE+D +I E D DG G +++E + +
Sbjct: 21 EFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 229 YCVHIM 234
V M
Sbjct: 81 MMVRQM 86
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 91/161 (56%), Gaps = 19/161 (11%)
Query: 73 LTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 132
+T++A++ D D E+ ++ F V D+DG G+I+ +L+ + G KL D ++ +
Sbjct: 39 MTIIAQQSNDYDVEK-LKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLP-YNFDLLLDQI 96
Query: 133 DIDGDGQVNYEGNGTIDFPEFLTM-MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELR 191
D DG G+ ID+ EF+ + RK S++ I AFRVFD D +G I+ AEL
Sbjct: 97 DSDGSGK--------IDYTEFIAAALDRKQL---SKKLIYCAFRVFDVDNDGEITTAELA 145
Query: 192 HVMTNLGEK--LTDEEVD---EMIREADIDGDGQVNYEVYT 227
H++ N +K +T +V+ MIR+ D + DG++++ ++
Sbjct: 146 HILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFS 186
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 79/155 (50%), Gaps = 36/155 (23%)
Query: 10 DGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTID 68
DG G IT ++L + G + P +L +++++D+D G+G ID
Sbjct: 64 DGKGYITKEQLKKGLEKDGLKLPYNFDL--LLDQIDSD----------------GSGKID 105
Query: 69 FPEFLTM-MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK--LTDEEV 125
+ EF+ + RK S++ I AFRVFD D +G I+ AEL H++ N +K +T +V
Sbjct: 106 YTEFIAAALDRKQL---SKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDV 162
Query: 126 D---EMIREADIDGDGQVNYEGNGTIDFPEFLTMM 157
+ MIR+ D + DG+ IDF EF MM
Sbjct: 163 NRVKRMIRDVDKNNDGK--------IDFHEFSEMM 189
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 53/82 (64%), Gaps = 4/82 (4%)
Query: 158 ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 217
+KM + D++EEI +AF++FD D G IS L+ V LGE LTDEE+ EMI EAD DG
Sbjct: 1 TQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDG 60
Query: 218 DGQVNYEVYTIYCVHIMGNTYL 239
DG+V+ + + + IM T L
Sbjct: 61 DGEVSEQEF----LRIMKKTSL 78
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 53/83 (63%), Gaps = 8/83 (9%)
Query: 77 ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 136
+KM + D++EEI +AF++FD D G IS L+ V LGE LTDEE+ EMI EAD DG
Sbjct: 1 TQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDG 60
Query: 137 DGQVNYEGNGTIDFPEFLTMMAR 159
DG+V+ + EFL +M +
Sbjct: 61 DGEVSEQ--------EFLRIMKK 75
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 18/74 (24%)
Query: 7 SLLDGD--GTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGN 64
L D D G I+ K L V + LG+N T+ ELQ+MI+E D D G+
Sbjct: 18 KLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRD----------------GD 61
Query: 65 GTIDFPEFLTMMAR 78
G + EFL +M +
Sbjct: 62 GEVSEQEFLRIMKK 75
Score = 27.7 bits (60), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 40 INEVDADENVESNLQYAELFVYHGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKD 99
++E D E + L+ +LF G I F L +A+++ + ++EE++E D+D
Sbjct: 4 MSEKDTKEEI---LKAFKLFDDDETGKISFKN-LKRVAKELGENLTDEELQEMIDEADRD 59
Query: 100 GNGFISAAELRHVM 113
G+G +S E +M
Sbjct: 60 GDGEVSEQEFLRIM 73
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 79/137 (57%), Gaps = 13/137 (9%)
Query: 87 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNG 146
+E++EAF + D++ +GFI +L+ + ++LG D+E+ M++EA G
Sbjct: 19 QEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEAP------------G 66
Query: 147 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 206
++F FL++ + K+ TDSEE IR AF +FD+ ++ ++ ++ N+G+ +E+
Sbjct: 67 PLNFTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEM 126
Query: 207 DEMIREADIDGDGQVNY 223
+EA ++G G+ +Y
Sbjct: 127 RMTFKEAPVEG-GKFDY 142
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 29/146 (19%)
Query: 12 DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPE 71
DG I +L + SLG+ P + EL M+ E G ++F
Sbjct: 33 DGFIDINDLKEMFSSLGRTPDDKELTAMLKE--------------------APGPLNFTM 72
Query: 72 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRE 131
FL++ + K+ TDSEE IR AF +FD+ ++ ++ ++ N+G+ +E+ +E
Sbjct: 73 FLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMTFKE 132
Query: 132 ADIDGDGQVNYEGNGTIDFPEFLTMM 157
A ++G G D+ F+ M+
Sbjct: 133 APVEG---------GKFDYVRFVAMI 149
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 79/137 (57%), Gaps = 13/137 (9%)
Query: 87 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNG 146
+E++EAF + D++ +GFI +L+ + ++LG D+E+ M++EA G
Sbjct: 23 QEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEAP------------G 70
Query: 147 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 206
++F FL++ + K+ TDSEE IR AF +FD+ ++ ++ ++ N+G+ +E+
Sbjct: 71 PLNFTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEM 130
Query: 207 DEMIREADIDGDGQVNY 223
+EA ++G G+ +Y
Sbjct: 131 RMTFKEAPVEG-GKFDY 146
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 29/146 (19%)
Query: 12 DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPE 71
DG I +L + SLG+ P + EL M+ E G ++F
Sbjct: 37 DGFIDINDLKEMFSSLGRTPDDKELTAMLKE--------------------APGPLNFTM 76
Query: 72 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRE 131
FL++ + K+ TDSEE IR AF +FD+ ++ ++ ++ N+G+ +E+ +E
Sbjct: 77 FLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMTFKE 136
Query: 132 ADIDGDGQVNYEGNGTIDFPEFLTMM 157
A ++G G D+ F+ M+
Sbjct: 137 APVEG---------GKFDYVRFVAMI 153
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 79/137 (57%), Gaps = 13/137 (9%)
Query: 87 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNG 146
+E++EAF + D++ +GFI +L+ + ++LG D+E+ M++EA G
Sbjct: 23 QEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEAP------------G 70
Query: 147 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 206
++F FL++ + K+ TDSEE IR AF +FD+ ++ ++ ++ N+G+ +E+
Sbjct: 71 PLNFTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEM 130
Query: 207 DEMIREADIDGDGQVNY 223
+EA ++G G+ +Y
Sbjct: 131 RMTFKEAPVEG-GKFDY 146
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 29/146 (19%)
Query: 12 DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPE 71
DG I +L + SLG+ P + EL M+ E G ++F
Sbjct: 37 DGFIDINDLKEMFSSLGRTPDDKELTAMLKE--------------------APGPLNFTM 76
Query: 72 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRE 131
FL++ + K+ TDSEE IR AF +FD+ ++ ++ ++ N+G+ +E+ +E
Sbjct: 77 FLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMTFKE 136
Query: 132 ADIDGDGQVNYEGNGTIDFPEFLTMM 157
A ++G G D+ F+ M+
Sbjct: 137 APVEG---------GKFDYVRFVAMI 153
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 49/78 (62%), Gaps = 8/78 (10%)
Query: 84 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 143
+ ++EIREAF +FD DG+G I A EL+ M LG + EE+ +MI E D D
Sbjct: 27 EQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKD-------- 78
Query: 144 GNGTIDFPEFLTMMARKM 161
G+GTIDF EFLTMM KM
Sbjct: 79 GSGTIDFEEFLTMMTAKM 96
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 40/71 (56%), Gaps = 16/71 (22%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DG GTI KEL MR+LG P + E++ MI+E+D D G+GTIDF
Sbjct: 42 DGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKD----------------GSGTIDF 85
Query: 70 PEFLTMMARKM 80
EFLTMM KM
Sbjct: 86 EEFLTMMTAKM 96
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 165 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 224
+ ++EIREAF +FD DG+G I A EL+ M LG + EE+ +MI E D DG G +++E
Sbjct: 27 EQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFE 86
Query: 225 VY 226
+
Sbjct: 87 EF 88
Score = 32.0 bits (71), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 57 ELFVYHGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT 114
+LF G+GTID E M R + +EEI++ DKDG+G I E +MT
Sbjct: 37 DLFDTDGSGTIDAKELKVAM-RALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMT 93
Score = 31.2 bits (69), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 120 LTDEEVDEMIREA-DIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFD 178
LT+E+ E IREA D+ + +G+GTID E M R + +EEI++ D
Sbjct: 24 LTEEQKQE-IREAFDL-----FDTDGSGTIDAKELKVAM-RALGFEPKKEEIKKMISEID 76
Query: 179 KDGNGFISAAELRHVMT 195
KDG+G I E +MT
Sbjct: 77 KDGSGTIDFEEFLTMMT 93
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 50/75 (66%), Gaps = 8/75 (10%)
Query: 84 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 143
D EEIREAF+VFD+DGNGFIS EL M +LG + E++ +I+ D+DGDGQV++E
Sbjct: 33 DELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFE 92
Query: 144 GNGTIDFPEFLTMMA 158
EF+T++
Sbjct: 93 --------EFVTLLG 99
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%)
Query: 165 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 224
D EEIREAF+VFD+DGNGFIS EL M +LG + E++ +I+ D+DGDGQV++E
Sbjct: 33 DELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFE 92
Query: 225 VYT 227
+
Sbjct: 93 EFV 95
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 16/68 (23%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DG+G I+ +ELGT MRSLG P E EL+ +I +D D G+G +DF
Sbjct: 48 DGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMD----------------GDGQVDF 91
Query: 70 PEFLTMMA 77
EF+T++
Sbjct: 92 EEFVTLLG 99
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 8/75 (10%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
E +EAF +FDKD NG IS++EL VM +LG ++ EV++++ E D+DG+ Q
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ-------- 62
Query: 148 IDFPEFLTMMARKMK 162
I+F EFL +M+R++K
Sbjct: 63 IEFSEFLALMSRQLK 77
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 16/72 (22%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
D +G+I++ EL TVMRSLG +P+EAE+ D++NE+D D GN I+F
Sbjct: 22 DNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVD----------------GNHQIEF 65
Query: 70 PEFLTMMARKMK 81
EFL +M+R++K
Sbjct: 66 SEFLALMSRQLK 77
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 41/58 (70%)
Query: 169 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVY 226
E +EAF +FDKD NG IS++EL VM +LG ++ EV++++ E D+DG+ Q+ + +
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEF 68
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 89/156 (57%), Gaps = 17/156 (10%)
Query: 73 LTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 132
+T++A++ D D ++ ++ AF D++G G I+ +LR + G L D ++ +
Sbjct: 42 MTIIAQQSNDYDVQK-LKAAFLHLDEEGKGNITKLQLRKGLERSGLMLP-PNFDLLLDQI 99
Query: 133 DIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRH 192
D DG +G ID+ EFL + + S++ I AFRVFD D +G I+ AEL H
Sbjct: 100 DSDG--------SGNIDYTEFLAAAIDRRQL--SKKLIYCAFRVFDVDNDGEITTAELAH 149
Query: 193 VMTNLGEK--LTDEEVDE---MIREADIDGDGQVNY 223
V+ N ++ +T+ +V++ MIRE D +GDG++++
Sbjct: 150 VLFNGNKRGNITERDVNQVKKMIREVDKNGDGKIDF 185
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 80/154 (51%), Gaps = 34/154 (22%)
Query: 10 DGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTID 68
+G G IT +L + RS P +L +++++D+D G+G ID
Sbjct: 67 EGKGNITKLQLRKGLERSGLMLPPNFDL--LLDQIDSD----------------GSGNID 108
Query: 69 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK--LTDEEVD 126
+ EFL + + S++ I AFRVFD D +G I+ AEL HV+ N ++ +T+ +V+
Sbjct: 109 YTEFLAAAIDRRQL--SKKLIYCAFRVFDVDNDGEITTAELAHVLFNGNKRGNITERDVN 166
Query: 127 E---MIREADIDGDGQVNYEGNGTIDFPEFLTMM 157
+ MIRE D +GDG+ IDF EF MM
Sbjct: 167 QVKKMIREVDKNGDGK--------IDFYEFSEMM 192
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 21/73 (28%)
Query: 9 LDGDGTITTKELGTVMRSLGQ--NPTEA---ELQDMINEVDADENVESNLQYAELFVYHG 63
+D DG ITT EL V+ + + N TE +++ MI EVD + G
Sbjct: 136 VDNDGEITTAELAHVLFNGNKRGNITERDVNQVKKMIREVDKN----------------G 179
Query: 64 NGTIDFPEFLTMM 76
+G IDF EF MM
Sbjct: 180 DGKIDFYEFSEMM 192
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 83/160 (51%), Gaps = 16/160 (10%)
Query: 73 LTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 132
LT++A+ + D + +R F D D +G +S+ E+ + +G + ++ +++R+
Sbjct: 44 LTIIAKHLCDVEINN-LRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDI 102
Query: 133 DIDGDGQVNYEG--NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAEL 190
D + GQ++Y TID +L +E F+ FD DGNG IS EL
Sbjct: 103 DSNASGQIHYTDFLAATIDKQTYL-----------KKEVCLIPFKFFDIDGNGKISVEEL 151
Query: 191 RHVM--TNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
+ + ++ L D+ +D +++E D++GDG++++ + +
Sbjct: 152 KRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFML 191
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 76/154 (49%), Gaps = 27/154 (17%)
Query: 9 LDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTID 68
+D GT++++E+ ++ +G ++ ++ ++D+ N + Y + TID
Sbjct: 68 VDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDS--NASGQIHYTDFLA----ATID 121
Query: 69 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM--TNLGEKLTDEEVD 126
+L +E F+ FD DGNG IS EL+ + ++ L D+ +D
Sbjct: 122 KQTYL-----------KKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAID 170
Query: 127 EMIREADIDGDGQVNYEGNGTIDFPEFLTMMARK 160
+++E D++GDG+ IDF EF+ MM++K
Sbjct: 171 SLLQEVDLNGDGE--------IDFHEFMLMMSKK 196
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 49/72 (68%), Gaps = 8/72 (11%)
Query: 86 EEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGN 145
++E+REAFR++DK+GNG+IS +R ++ L E L+ E++D MI E D D G+
Sbjct: 2 QQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDAD--------GS 53
Query: 146 GTIDFPEFLTMM 157
GT+DF EF+ +M
Sbjct: 54 GTVDFEEFMGVM 65
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 44/60 (73%)
Query: 167 EEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVY 226
++E+REAFR++DK+GNG+IS +R ++ L E L+ E++D MI E D DG G V++E +
Sbjct: 2 QQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEF 61
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 16/67 (23%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
+G+G I+T + ++ L + + +L MI+E+DAD G+GT+DF
Sbjct: 15 EGNGYISTDVMREILAELDETLSSEDLDAMIDEIDAD----------------GSGTVDF 58
Query: 70 PEFLTMM 76
EF+ +M
Sbjct: 59 EEFMGVM 65
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 87/168 (51%), Gaps = 11/168 (6%)
Query: 73 LTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV---DEMI 129
L MA K+ + +E+ + FR DK+G+G + EL + KL+ EEV D
Sbjct: 49 LLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYS----KLSGEEVAVFDLPQ 104
Query: 130 READIDGD-GQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAA 188
E+++D G +++ NG ID+ EF+T+ A K S++++ AF+ FD+DGNG IS
Sbjct: 105 IESEVDAILGAADFDRNGYIDYSEFVTV-AMDRKSLLSKDKLESAFQKFDQDGNGKISVD 163
Query: 189 ELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTIYCVHIMGN 236
EL V + L + EMI D + DG V++E + + N
Sbjct: 164 ELASVFG--LDHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQKLCSN 209
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 11/96 (11%)
Query: 64 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 123
NG ID+ EF+T+ A K S++++ AF+ FD+DGNG IS EL V + L +
Sbjct: 121 NGYIDYSEFVTV-AMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFG--LDHLESK 177
Query: 124 EVDEMIREADIDGDGQVNYEGNGTIDFPEFLTMMAR 159
EMI D + DG V DF EF M+ +
Sbjct: 178 TWKEMISGIDSNNDGDV--------DFEEFCKMIQK 205
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 74/140 (52%), Gaps = 25/140 (17%)
Query: 9 LDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTID 68
LD G+++ +E + + L QNP +Q +I+ D D GNG +D
Sbjct: 32 LDNSGSLSVEEFMS-LPELQQNPL---VQRVIDIFDTD----------------GNGEVD 71
Query: 69 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM-----TNLGEKLTDE 123
F EF+ +++ D E+++R AFR++D D +G+IS EL V+ NL + +
Sbjct: 72 FKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQ 131
Query: 124 EVDEMIREADIDGDGQVNYE 143
VD+ I AD DGDG++++E
Sbjct: 132 IVDKTIINADKDGDGRISFE 151
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 17/151 (11%)
Query: 82 DTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 141
D D + + + F+ D D +G +S E +L E + V +I D DG
Sbjct: 16 DADEIKRLGKRFKKLDLDNSGSLSVEEF----MSLPELQQNPLVQRVIDIFDTDG----- 66
Query: 142 YEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM-----TN 196
NG +DF EF+ +++ D E+++R AFR++D D +G+IS EL V+ N
Sbjct: 67 ---NGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNN 123
Query: 197 LGEKLTDEEVDEMIREADIDGDGQVNYEVYT 227
L + + VD+ I AD DGDG++++E +
Sbjct: 124 LKDTQLQQIVDKTIINADKDGDGRISFEEFC 154
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 85/159 (53%), Gaps = 11/159 (6%)
Query: 73 LTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV---DEMI 129
L MA K+ + +E+ + FR DK+G+G + EL + KL+ EEV D
Sbjct: 332 LLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQEL----IDGYSKLSGEEVAVFDLPQ 387
Query: 130 READIDGD-GQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAA 188
E+++D G +++ NG ID+ EF+T+ A K S++++ AF+ FD+DGNG IS
Sbjct: 388 IESEVDAILGAADFDRNGYIDYSEFVTV-AMDRKSLLSKDKLESAFQKFDQDGNGKISVD 446
Query: 189 ELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYT 227
EL V + L + EMI D + DG V++E +
Sbjct: 447 ELASVFGL--DHLESKTWKEMISGIDSNNDGDVDFEEFC 483
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 11/96 (11%)
Query: 64 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 123
NG ID+ EF+T+ A K S++++ AF+ FD+DGNG IS EL V + L +
Sbjct: 404 NGYIDYSEFVTV-AMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGL--DHLESK 460
Query: 124 EVDEMIREADIDGDGQVNYEGNGTIDFPEFLTMMAR 159
EMI D + DG V DF EF M+ +
Sbjct: 461 TWKEMISGIDSNNDGDV--------DFEEFCKMIQK 488
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 74/140 (52%), Gaps = 25/140 (17%)
Query: 9 LDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTID 68
LD G+++ +E + + L QNP +Q +I+ D D GNG +D
Sbjct: 31 LDNSGSLSVEEFMS-LPELQQNPL---VQRVIDIFDTD----------------GNGEVD 70
Query: 69 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM-----TNLGEKLTDE 123
F EF+ +++ D E+++R AFR++D D +G+IS EL V+ NL + +
Sbjct: 71 FKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQ 130
Query: 124 EVDEMIREADIDGDGQVNYE 143
VD+ I AD DGDG++++E
Sbjct: 131 IVDKTIINADKDGDGRISFE 150
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 17/151 (11%)
Query: 82 DTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 141
D D + + + F+ D D +G +S E +L E + V +I D DG
Sbjct: 15 DADEIKRLGKRFKKLDLDNSGSLSVEEF----MSLPELQQNPLVQRVIDIFDTDG----- 65
Query: 142 YEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM-----TN 196
NG +DF EF+ +++ D E+++R AFR++D D +G+IS EL V+ N
Sbjct: 66 ---NGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNN 122
Query: 197 LGEKLTDEEVDEMIREADIDGDGQVNYEVYT 227
L + + VD+ I AD DGDG++++E +
Sbjct: 123 LKDTQLQQIVDKTIINADKDGDGRISFEEFC 153
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 74/140 (52%), Gaps = 25/140 (17%)
Query: 9 LDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTID 68
LD G+++ +E + + L QNP +Q +I+ D D GNG +D
Sbjct: 18 LDNSGSLSVEEFMS-LPELQQNPL---VQRVIDIFDTD----------------GNGEVD 57
Query: 69 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM-----TNLGEKLTDE 123
F EF+ +++ D E+++R AFR++D D +G+IS EL V+ NL + +
Sbjct: 58 FKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQ 117
Query: 124 EVDEMIREADIDGDGQVNYE 143
VD+ I AD DGDG++++E
Sbjct: 118 IVDKTIINADKDGDGRISFE 137
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 17/151 (11%)
Query: 82 DTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 141
D D + + + F+ D D +G +S E +L E + V +I D DG
Sbjct: 2 DADEIKRLGKRFKKLDLDNSGSLSVEEF----MSLPELQQNPLVQRVIDIFDTDG----- 52
Query: 142 YEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM-----TN 196
NG +DF EF+ +++ D E+++R AFR++D D +G+IS EL V+ N
Sbjct: 53 ---NGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNN 109
Query: 197 LGEKLTDEEVDEMIREADIDGDGQVNYEVYT 227
L + + VD+ I AD DGDG++++E +
Sbjct: 110 LKDTQLQQIVDKTIINADKDGDGRISFEEFC 140
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 74/140 (52%), Gaps = 25/140 (17%)
Query: 9 LDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTID 68
LD G+++ +E + + L QNP +Q +I+ D D GNG +D
Sbjct: 17 LDNSGSLSVEEFMS-LPELQQNPL---VQRVIDIFDTD----------------GNGEVD 56
Query: 69 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM-----TNLGEKLTDE 123
F EF+ +++ D E+++R AFR++D D +G+IS EL V+ NL + +
Sbjct: 57 FKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQ 116
Query: 124 EVDEMIREADIDGDGQVNYE 143
VD+ I AD DGDG++++E
Sbjct: 117 IVDKTIINADKDGDGRISFE 136
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 17/151 (11%)
Query: 82 DTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 141
D D + + + F+ D D +G +S E +L E + V +I D DG
Sbjct: 1 DADEIKRLGKRFKKLDLDNSGSLSVEEF----MSLPELQQNPLVQRVIDIFDTDG----- 51
Query: 142 YEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM-----TN 196
NG +DF EF+ +++ D E+++R AFR++D D +G+IS EL V+ N
Sbjct: 52 ---NGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNN 108
Query: 197 LGEKLTDEEVDEMIREADIDGDGQVNYEVYT 227
L + + VD+ I AD DGDG++++E +
Sbjct: 109 LKDTQLQQIVDKTIINADKDGDGRISFEEFC 139
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 78/147 (53%), Gaps = 15/147 (10%)
Query: 84 DSEEEIREAFRVFD-KDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 141
D EE+RE F +FD DG +G + AA++ ++ LG T EA + G
Sbjct: 6 DEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPT---------EAQVHQHGGTK 56
Query: 142 YEGNGTIDFPEFLTMMAR-KMKDT-DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGE 199
G E L + KDT + +E EAF+ FD++G G IS+AE+R+V+ LGE
Sbjct: 57 KMGEKAYKLEEILPIYEEMSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGE 116
Query: 200 KLTDEEVDEMIREADI--DGDGQVNYE 224
++T+++ +++ DI D DG + YE
Sbjct: 117 RITEDQCNDIFTFCDIREDIDGNIKYE 143
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 73/135 (54%), Gaps = 19/135 (14%)
Query: 12 DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPE 71
DG + ++G ++R LG NPTEA++ + E + E+ P
Sbjct: 25 DGDVDAAKVGDLLRCLGMNPTEAQVH---QHGGTKKMGEKAYKLEEIL----------PI 71
Query: 72 FLTMMARKMKDT-DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIR 130
+ M + KDT + +E EAF+ FD++G G IS+AE+R+V+ LGE++T+++ +++
Sbjct: 72 YEEMSS---KDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFT 128
Query: 131 EADI--DGDGQVNYE 143
DI D DG + YE
Sbjct: 129 FCDIREDIDGNIKYE 143
Score = 35.0 bits (79), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 30/49 (61%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAEL 58
+G G I++ E+ V++ LG+ TE + D+ D E+++ N++Y +L
Sbjct: 97 EGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDL 145
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 40/71 (56%), Gaps = 16/71 (22%)
Query: 12 DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPE 71
DG I+TKELG V R LGQNPT ELQ+ I+EVD D G+GT+DF E
Sbjct: 33 DGCISTKELGKVXRXLGQNPTPEELQEXIDEVDED----------------GSGTVDFDE 76
Query: 72 FLTMMARKMKD 82
FL R KD
Sbjct: 77 FLVXXVRCXKD 87
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 38/77 (49%), Gaps = 9/77 (11%)
Query: 88 EIREAFRVFDKDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNG 146
E + AF +F +G IS EL V LG+ T EE+ E I E D DG +G
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDG--------SG 70
Query: 147 TIDFPEFLTMMARKMKD 163
T+DF EFL R KD
Sbjct: 71 TVDFDEFLVXXVRCXKD 87
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 169 EIREAFRVFDKDG-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYT 227
E + AF +F +G IS EL V LG+ T EE+ E I E D DG G V+++ +
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTVDFDEFL 78
Query: 228 IYCVHI 233
+ V
Sbjct: 79 VXXVRC 84
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 46/59 (77%)
Query: 168 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVY 226
E+ +AF+VFDK+ G +S +LR+++T LGEKLTD EVDE+++ ++D +G+++Y+ +
Sbjct: 5 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKF 63
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 45/57 (78%)
Query: 87 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 143
E+ +AF+VFDK+ G +S +LR+++T LGEKLTD EVDE+++ ++D +G+++Y+
Sbjct: 5 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYK 61
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 9/77 (11%)
Query: 84 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK-LTDEEVDEMIREADIDGDGQVNY 142
D EEEI AF+VFD +G+G I E + +M +GE+ LTD EV+E ++EAD D
Sbjct: 5 DDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADED------- 57
Query: 143 EGNGTIDFPEFLTMMAR 159
GNG ID PEF+ ++ +
Sbjct: 58 -GNGVIDIPEFMDLIKK 73
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 165 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK-LTDEEVDEMIREADIDGDGQVN 222
D EEEI AF+VFD +G+G I E + +M +GE+ LTD EV+E ++EAD DG+G ++
Sbjct: 5 DDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVID 63
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 17/70 (24%)
Query: 10 DGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADENVESNLQYAELFVYHGNGTID 68
+GDG I E +M+ +G+ P T+AE+++ + E D D GNG ID
Sbjct: 20 NGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADED----------------GNGVID 63
Query: 69 FPEFLTMMAR 78
PEF+ ++ +
Sbjct: 64 IPEFMDLIKK 73
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 50 ESNLQYAELFVYHGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAEL 109
E L+ ++F +G+G IDF EF +M + ++ ++ E+ EA + D+DGNG I E
Sbjct: 8 EEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEF 67
Query: 110 RHVM 113
++
Sbjct: 68 MDLI 71
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 144 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM 194
G+G IDF EF +M + ++ ++ E+ EA + D+DGNG I E ++
Sbjct: 21 GDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLI 71
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 161 MKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 220
M+D D E E++EAFRV DK+ G I LR ++ +LG++LT++E++ MI E D DG G
Sbjct: 1 MEDLD-ERELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGT 59
Query: 221 VNYEVY 226
V+YE +
Sbjct: 60 VDYEEF 65
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 80 MKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 139
M+D D E E++EAFRV DK+ G I LR ++ +LG++LT++E++ MI E D DG G
Sbjct: 1 MEDLD-ERELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGT 59
Query: 140 VNYE 143
V+YE
Sbjct: 60 VDYE 63
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 16/64 (25%)
Query: 13 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPEF 72
G I L +++SLG TE E+++MI E D D G+GT+D+ EF
Sbjct: 22 GVIKVDVLRWILKSLGDELTEDEIENMIAETDTD----------------GSGTVDYEEF 65
Query: 73 LTMM 76
+M
Sbjct: 66 KCLM 69
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 10/169 (5%)
Query: 73 LTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAEL----RHVMTNLGEKLTDEEVDEM 128
L M K+ D +E+ F DK+G+G + AEL + +M G+ + + +
Sbjct: 321 LLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAV 380
Query: 129 IREADIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAA 188
E D D V+++ NG I++ EF+T+ A K S E + AFR+FD D +G IS+
Sbjct: 381 EHEVDQVLDA-VDFDKNGYIEYSEFVTV-AMDRKTLLSRERLERAFRMFDSDNSGKISST 438
Query: 189 ELRHVMTNLGEKLTDEEV-DEMIREADIDGDGQVNYEVYTIYCVHIMGN 236
EL T G D E ++ E D + DG+V+++ + + + GN
Sbjct: 439 EL---ATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLKLCGN 484
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 26/155 (16%)
Query: 10 DGDGTITTKEL----GTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNG 65
+GDG + EL +MR GQ+ + + + +EVD Q + + NG
Sbjct: 347 NGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVD---------QVLDAVDFDKNG 397
Query: 66 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 125
I++ EF+T+ A K S E + AFR+FD D +G IS+ EL T G D E
Sbjct: 398 YIEYSEFVTV-AMDRKTLLSRERLERAFRMFDSDNSGKISSTEL---ATIFGVSDVDSET 453
Query: 126 -DEMIREADIDGDGQVNYEGNGTIDFPEFLTMMAR 159
++ E D + DG+V DF EF M+ +
Sbjct: 454 WKSVLSEVDKNNDGEV--------DFDEFQQMLLK 480
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 10/169 (5%)
Query: 73 LTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAEL----RHVMTNLGEKLTDEEVDEM 128
L M K+ D +E+ F DK+G+G + AEL + +M G+ + + +
Sbjct: 344 LLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAV 403
Query: 129 IREADIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAA 188
E D D V+++ NG I++ EF+T+ A K S E + AFR+FD D +G IS+
Sbjct: 404 EHEVDQVLDA-VDFDKNGYIEYSEFVTV-AMDRKTLLSRERLERAFRMFDSDNSGKISST 461
Query: 189 ELRHVMTNLGEKLTDEEV-DEMIREADIDGDGQVNYEVYTIYCVHIMGN 236
EL T G D E ++ E D + DG+V+++ + + + GN
Sbjct: 462 EL---ATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLKLCGN 507
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 26/155 (16%)
Query: 10 DGDGTITTKEL----GTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNG 65
+GDG + EL +MR GQ+ + + + +EVD Q + + NG
Sbjct: 370 NGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVD---------QVLDAVDFDKNG 420
Query: 66 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 125
I++ EF+T+ A K S E + AFR+FD D +G IS+ EL T G D E
Sbjct: 421 YIEYSEFVTV-AMDRKTLLSRERLERAFRMFDSDNSGKISSTEL---ATIFGVSDVDSET 476
Query: 126 -DEMIREADIDGDGQVNYEGNGTIDFPEFLTMMAR 159
++ E D + DG+V DF EF M+ +
Sbjct: 477 WKSVLSEVDKNNDGEV--------DFDEFQQMLLK 503
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 10/169 (5%)
Query: 73 LTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAEL----RHVMTNLGEKLTDEEVDEM 128
L M K+ D +E+ F DK+G+G + AEL + +M G+ + + +
Sbjct: 345 LLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAV 404
Query: 129 IREADIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAA 188
E D D V+++ NG I++ EF+T+ A K S E + AFR+FD D +G IS+
Sbjct: 405 EHEVDQVLDA-VDFDKNGYIEYSEFVTV-AMDRKTLLSRERLERAFRMFDSDNSGKISST 462
Query: 189 ELRHVMTNLGEKLTDEEV-DEMIREADIDGDGQVNYEVYTIYCVHIMGN 236
EL T G D E ++ E D + DG+V+++ + + + GN
Sbjct: 463 EL---ATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLKLCGN 508
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 26/155 (16%)
Query: 10 DGDGTITTKEL----GTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNG 65
+GDG + EL +MR GQ+ + + + +EVD Q + + NG
Sbjct: 371 NGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVD---------QVLDAVDFDKNG 421
Query: 66 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 125
I++ EF+T+ A K S E + AFR+FD D +G IS+ EL T G D E
Sbjct: 422 YIEYSEFVTV-AMDRKTLLSRERLERAFRMFDSDNSGKISSTEL---ATIFGVSDVDSET 477
Query: 126 -DEMIREADIDGDGQVNYEGNGTIDFPEFLTMMAR 159
++ E D + DG+V DF EF M+ +
Sbjct: 478 WKSVLSEVDKNNDGEV--------DFDEFQQMLLK 504
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 165 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 224
DS EEI +AFR+FD D +G I+ +LR V LGE LT+EE+ EMI EAD + D +++ +
Sbjct: 6 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDED 65
Query: 225 VYTIYCVHIMGNTYL 239
+ + IM T L
Sbjct: 66 EF----IRIMKKTSL 76
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 8/76 (10%)
Query: 84 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 143
DS EEI +AFR+FD D +G I+ +LR V LGE LT+EE+ EMI EAD + D +
Sbjct: 6 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNE---- 61
Query: 144 GNGTIDFPEFLTMMAR 159
ID EF+ +M +
Sbjct: 62 ----IDEDEFIRIMKK 73
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVE 50
D GTIT K+L V + LG+N TE ELQ+MI E D +++ E
Sbjct: 21 DNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNE 61
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 88/165 (53%), Gaps = 23/165 (13%)
Query: 73 LTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAEL-------RHVMTNLGE-KLTDEE 124
+ + K+ + +E+ + F+ DK+G+G + EL R+ LGE K +EE
Sbjct: 341 ILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEE 400
Query: 125 VDEMIREADIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGF 184
VD +++E D D NG I++ EF+++ K + SEE +R AF +FD D +G
Sbjct: 401 VDNILKEVDFDK--------NGYIEYSEFISVCMDK-QILFSEERLRRAFNLFDTDKSGK 451
Query: 185 ISAAELRHV--MTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYT 227
I+ EL ++ +T++ EK ++++ EAD + D ++++ +
Sbjct: 452 ITKEELANLFGLTSISEKTW----NDVLGEADQNKDNMIDFDEFV 492
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 82/160 (51%), Gaps = 39/160 (24%)
Query: 10 DGDGTITTKEL---GTVMRS----LGQ-NPTEAELQDMINEVDADENVESNLQYAELFVY 61
+GDG + KEL V+R+ LG+ E E+ +++ EVD D+N
Sbjct: 367 NGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKN------------- 413
Query: 62 HGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHV--MTNLGEK 119
G I++ EF+++ K + SEE +R AF +FD D +G I+ EL ++ +T++ EK
Sbjct: 414 ---GYIEYSEFISVCMDK-QILFSEERLRRAFNLFDTDKSGKITKEELANLFGLTSISEK 469
Query: 120 LTDEEVDEMIREADIDGDGQVNYEGNGTIDFPEFLTMMAR 159
++++ EAD + D IDF EF++MM +
Sbjct: 470 TW----NDVLGEADQNKD--------NMIDFDEFVSMMHK 497
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 154 LTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAEL-------RHVMTNLGE-KLTDEE 205
+ + K+ + +E+ + F+ DK+G+G + EL R+ LGE K +EE
Sbjct: 341 ILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEE 400
Query: 206 VDEMIREADIDGDGQVNYEVYTIYCV 231
VD +++E D D +G + Y + C+
Sbjct: 401 VDNILKEVDFDKNGYIEYSEFISVCM 426
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 87/157 (55%), Gaps = 10/157 (6%)
Query: 73 LTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAEL----RHVMTNLGEKLTDEEVDEM 128
+ M K+ + +E+ + FR D +G+G + EL R +M G+ ++D + ++
Sbjct: 300 MLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQI 359
Query: 129 IREADIDGDGQ-VNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISA 187
EA++D Q V+++ NG I++ EF+T+ K + S E + AF+ FD DG+G I+
Sbjct: 360 --EAEVDHILQSVDFDRNGYIEYSEFVTVCMDK-QLLLSRERLLAAFQQFDSDGSGKITN 416
Query: 188 AELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 224
EL + ++ DE ++++E D + DG+V++E
Sbjct: 417 EELGRLFGV--TEVDDETWHQVLQECDKNNDGEVDFE 451
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 11/89 (12%)
Query: 154 LTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAEL----RHVMTNLGEKLTD------ 203
+ M K+ + +E+ + FR D +G+G + EL R +M G+ ++D
Sbjct: 300 MLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQI 359
Query: 204 -EEVDEMIREADIDGDGQVNYEVYTIYCV 231
EVD +++ D D +G + Y + C+
Sbjct: 360 EAEVDHILQSVDFDRNGYIEYSEFVTVCM 388
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 61/169 (36%), Gaps = 48/169 (28%)
Query: 17 TKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPEFLTMM 76
TKEL + R L N ++D E +E Y +L + G+ D
Sbjct: 313 TKELTQIFRQLDNNGD--------GQLDRKELIEG---YRKLMQWKGDTVSD-------- 353
Query: 77 ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 136
+ + E E+ + D D NG+I +E V + L+ E + ++ D DG
Sbjct: 354 ---LDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDG 410
Query: 137 DGQVNYE--------------------------GNGTIDFPEFLTMMAR 159
G++ E +G +DF EF+ MM +
Sbjct: 411 SGKITNEELGRLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQK 459
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 50/74 (67%), Gaps = 9/74 (12%)
Query: 87 EEIREAFRVFDKDGNGFISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYEGN 145
+E+R+AFR FD +G+G IS +ELR M LG ++ +++E+IR+ D++GDG+V
Sbjct: 7 KELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRV----- 61
Query: 146 GTIDFPEFLTMMAR 159
DF EF+ MM+R
Sbjct: 62 ---DFEEFVRMMSR 72
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 168 EEIREAFRVFDKDGNGFISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYEVY 226
+E+R+AFR FD +G+G IS +ELR M LG ++ +++E+IR+ D++GDG+V++E +
Sbjct: 7 KELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEF 66
Query: 227 T 227
Sbjct: 67 V 67
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 17/70 (24%)
Query: 10 DGDGTITTKELGTVMRSL-GQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTID 68
+GDG I+T EL MR L G +++++I +VD +G+G +D
Sbjct: 19 NGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVD----------------LNGDGRVD 62
Query: 69 FPEFLTMMAR 78
F EF+ MM+R
Sbjct: 63 FEEFVRMMSR 72
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 87/160 (54%), Gaps = 10/160 (6%)
Query: 73 LTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAEL----RHVMTNLGEKLTDEEVDEM 128
+ M K+ + +E+ + FR D +G+G + EL R +M G+ ++D +D
Sbjct: 26 MLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSD--LDSS 83
Query: 129 IREADIDGDGQ-VNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISA 187
EA++D Q V+++ NG I++ EF+T+ K + S E + AF+ FD DG+G I+
Sbjct: 84 QIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDK-QLLLSRERLLAAFQQFDSDGSGKITN 142
Query: 188 AELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYT 227
EL + ++ DE ++++E D + DG+V++E +
Sbjct: 143 EELGRLFGV--TEVDDETWHQVLQECDKNNDGEVDFEEFV 180
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 11/89 (12%)
Query: 154 LTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAEL----RHVMTNLGEKLTD------ 203
+ M K+ + +E+ + FR D +G+G + EL R +M G+ ++D
Sbjct: 26 MLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQI 85
Query: 204 -EEVDEMIREADIDGDGQVNYEVYTIYCV 231
EVD +++ D D +G + Y + C+
Sbjct: 86 EAEVDHILQSVDFDRNGYIEYSEFVTVCM 114
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 61/169 (36%), Gaps = 48/169 (28%)
Query: 17 TKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPEFLTMM 76
TKEL + R L N ++D E +E Y +L + G+ D
Sbjct: 39 TKELTQIFRQLDNNGD--------GQLDRKELIEG---YRKLMQWKGDTVSD-------- 79
Query: 77 ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 136
+ + E E+ + D D NG+I +E V + L+ E + ++ D DG
Sbjct: 80 ---LDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDG 136
Query: 137 DGQVNYE--------------------------GNGTIDFPEFLTMMAR 159
G++ E +G +DF EF+ MM +
Sbjct: 137 SGKITNEELGRLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQK 185
Score = 27.7 bits (60), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 18/69 (26%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DG G IT +ELG R G + EVD DE LQ + + +G +DF
Sbjct: 135 DGSGKITNEELG---RLFG-----------VTEVD-DETWHQVLQECD---KNNDGEVDF 176
Query: 70 PEFLTMMAR 78
EF+ MM +
Sbjct: 177 EEFVEMMQK 185
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 83/167 (49%), Gaps = 27/167 (16%)
Query: 73 LTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAEL---------------RHVMTNLG 117
L MA K+ D +++ E FR D + +G + EL ++ N G
Sbjct: 317 LLYMASKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEG 376
Query: 118 EKLTDEEVDEMIREADIDGDGQVNYEGNGTIDFPEFL-TMMARKMKDTDSEEEIREAFRV 176
+ D+ +D ++ D+DG +G+I++ EF+ + + R + S E + AF++
Sbjct: 377 STIEDQ-IDSLMPLLDMDG--------SGSIEYSEFIASAIDRTI--LLSRERMERAFKM 425
Query: 177 FDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 223
FDKDG+G IS EL + + + EE++ +I + D + DG+V++
Sbjct: 426 FDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDF 472
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 55/96 (57%), Gaps = 11/96 (11%)
Query: 63 GNGTIDFPEFL-TMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLT 121
G+G+I++ EF+ + + R + S E + AF++FDKDG+G IS EL + + +
Sbjct: 394 GSGSIEYSEFIASAIDRTI--LLSRERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQ 451
Query: 122 DEEVDEMIREADIDGDGQVNYEGNGTIDFPEFLTMM 157
EE++ +I + D + DG+V DF EF+ M+
Sbjct: 452 MEELESIIEQVDNNKDGEV--------DFNEFVEML 479
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 16/67 (23%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DG G I+TKEL + + EL+ +I +VD ++ +G +DF
Sbjct: 429 DGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNK----------------DGEVDF 472
Query: 70 PEFLTMM 76
EF+ M+
Sbjct: 473 NEFVEML 479
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 8/78 (10%)
Query: 84 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 143
+ ++EIREAF +FD DG G I EL+ M LG + EE+ +MI E D +G G++N
Sbjct: 28 EQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN-- 85
Query: 144 GNGTIDFPEFLTMMARKM 161
F +FLT+M +KM
Sbjct: 86 ------FGDFLTVMTQKM 97
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 165 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 223
+ ++EIREAF +FD DG G I EL+ M LG + EE+ +MI E D +G G++N+
Sbjct: 28 EQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNF 86
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 16/71 (22%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
DG GTI KEL MR+LG P + E++ MI+E+D + G G ++F
Sbjct: 43 DGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKE----------------GTGKMNF 86
Query: 70 PEFLTMMARKM 80
+FLT+M +KM
Sbjct: 87 GDFLTVMTQKM 97
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 104 ISAAELRHVMTNLGEKLTDEEVDEMIREA-DIDGDGQVNYEGNGTIDFPEFLTMMARKMK 162
++++ R M+ E LT+E+ E IREA D+ + +G GTID E M R +
Sbjct: 10 MASSSQRKRMSPKPE-LTEEQKQE-IREAFDL-----FDADGTGTIDVKELKVAM-RALG 61
Query: 163 DTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN 196
+EEI++ DK+G G ++ + VMT
Sbjct: 62 FEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQ 95
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 58 LFVYHGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN 115
LF G GTID E M R + +EEI++ DK+G G ++ + VMT
Sbjct: 39 LFDADGTGTIDVKELKVAM-RALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQ 95
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 10/169 (5%)
Query: 73 LTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAEL----RHVMTNLGEKLTDEEVDEM 128
L K+ D +E+ F DK+G+G + AEL + + G+ + + +
Sbjct: 321 LLYXGSKLTSQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAV 380
Query: 129 IREADIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAA 188
E D D V+++ NG I++ EF+T+ A K S E + AFR FD D +G IS+
Sbjct: 381 EHEVDQVLDA-VDFDKNGYIEYSEFVTV-AXDRKTLLSRERLERAFRXFDSDNSGKISST 438
Query: 189 ELRHVMTNLGEKLTDEEV-DEMIREADIDGDGQVNYEVYTIYCVHIMGN 236
EL T G D E ++ E D + DG+V+++ + + + GN
Sbjct: 439 EL---ATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQXLLKLCGN 484
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 18/139 (12%)
Query: 10 DGDGTITTKEL----GTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNG 65
+GDG + EL + R GQ+ + + + +EVD Q + + NG
Sbjct: 347 NGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVD---------QVLDAVDFDKNG 397
Query: 66 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 125
I++ EF+T+ A K S E + AFR FD D +G IS+ EL T G D E
Sbjct: 398 YIEYSEFVTV-AXDRKTLLSRERLERAFRXFDSDNSGKISSTEL---ATIFGVSDVDSET 453
Query: 126 -DEMIREADIDGDGQVNYE 143
++ E D + DG+V+++
Sbjct: 454 WKSVLSEVDKNNDGEVDFD 472
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 47/73 (64%), Gaps = 8/73 (10%)
Query: 85 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEG 144
SEEE+ FR+FDK+ +GFI EL ++ GE + +E+++++++++D + DG+
Sbjct: 8 SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGR----- 62
Query: 145 NGTIDFPEFLTMM 157
IDF EFL MM
Sbjct: 63 ---IDFDEFLKMM 72
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 44/61 (72%)
Query: 166 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEV 225
SEEE+ FR+FDK+ +GFI EL ++ GE + +E+++++++++D + DG+++++
Sbjct: 8 SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDE 67
Query: 226 Y 226
+
Sbjct: 68 F 68
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 16/67 (23%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
+ DG I +ELG ++R+ G++ E +++D++ D+D+N +G IDF
Sbjct: 22 NADGFIDIEELGEILRATGEHVIEEDIEDLMK--DSDKN--------------NDGRIDF 65
Query: 70 PEFLTMM 76
EFL MM
Sbjct: 66 DEFLKMM 72
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 55/82 (67%), Gaps = 8/82 (9%)
Query: 76 MARKMKDTD---SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 132
M R MKD +EEE+ + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++
Sbjct: 1 MVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDG 60
Query: 133 DIDGDGQVNYEGNGTIDFPEFL 154
D + DG+++Y+ +F EF+
Sbjct: 61 DKNNDGRIDYD-----EFLEFM 77
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 51/73 (69%), Gaps = 3/73 (4%)
Query: 157 MARKMKDTD---SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 213
M R MKD +EEE+ + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++
Sbjct: 1 MVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDG 60
Query: 214 DIDGDGQVNYEVY 226
D + DG+++Y+ +
Sbjct: 61 DKNNDGRIDYDEF 73
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 16/134 (11%)
Query: 91 EAFRVFDKDGNGFISAAEL----RHVMTNL--GEKLTDEEVDEMIR------EADIDGDG 138
+ ++ FD D NG+I EL RH + L +K+TDE V ++ + +A DG
Sbjct: 15 QIWQHFDADDNGYIEGKELDDFFRHXLKKLQPKDKITDERVQQIKKSFXSAYDATFDGRL 74
Query: 139 QVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL- 197
Q+ N + E ++ R+ D+ E + +R +D D +G+ISAAEL++ + +L
Sbjct: 75 QIEELANXILPQEENFLLIFRREAPLDNSVEFXKIWRKYDADSSGYISAAELKNFLKDLF 134
Query: 198 ---GEKLTDEEVDE 208
+K+ ++DE
Sbjct: 135 LQHKKKIPPNKLDE 148
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 16/130 (12%)
Query: 10 DGDGTITTKELGTVMRSLGQ--NPTEAELQDMINEVDA------DENVESNLQYAELFVY 61
D +G I KEL R + P + + + ++ D + LQ EL
Sbjct: 23 DDNGYIEGKELDDFFRHXLKKLQPKDKITDERVQQIKKSFXSAYDATFDGRLQIEEL--- 79
Query: 62 HGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL----G 117
N + E ++ R+ D+ E + +R +D D +G+ISAAEL++ + +L
Sbjct: 80 -ANXILPQEENFLLIFRREAPLDNSVEFXKIWRKYDADSSGYISAAELKNFLKDLFLQHK 138
Query: 118 EKLTDEEVDE 127
+K+ ++DE
Sbjct: 139 KKIPPNKLDE 148
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 16/144 (11%)
Query: 89 IREAFRVFDKDGNGFISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
+ F+ DKD +G IS EL+ ++N V +I D E
Sbjct: 9 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFD--------RENKAG 60
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
++F EF T + + + D + FR +D+D +G I EL+ ++ G +L+D+ D
Sbjct: 61 VNFSEF-TGVWKYITDW------QNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHD 113
Query: 208 EMIREADIDGDGQVNYEVYTIYCV 231
+IR+ D G GQ+ ++ + C+
Sbjct: 114 ILIRKFDRQGRGQIAFDDFIQGCI 137
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
+ + FR +D+D +G I EL+ ++ G +L+D+ D +IR+ D G GQ+ ++
Sbjct: 75 DWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFD---- 130
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAA 188
DF + ++ R + + FR +D D +G+I +
Sbjct: 131 -DFIQGCIVLQR----------LTDIFRRYDTDQDGWIQVS 160
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 16/144 (11%)
Query: 89 IREAFRVFDKDGNGFISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
+ F+ DKD +G IS EL+ ++N V +I D E
Sbjct: 5 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFD--------RENKAG 56
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
++F EF T + + + D + FR +D+D +G I EL+ ++ G +L+D+ D
Sbjct: 57 VNFSEF-TGVWKYITDW------QNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHD 109
Query: 208 EMIREADIDGDGQVNYEVYTIYCV 231
+IR+ D G GQ+ ++ + C+
Sbjct: 110 ILIRKFDRQGRGQIAFDDFIQGCI 133
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
+ + FR +D+D +G I EL+ ++ G +L+D+ D +IR+ D G GQ+ ++
Sbjct: 71 DWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFD---- 126
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAA 188
DF + ++ R + + FR +D D +G+I +
Sbjct: 127 -DFIQGCIVLQR----------LTDIFRRYDTDQDGWIQVS 156
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 16/144 (11%)
Query: 89 IREAFRVFDKDGNGFISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
+ F+ DKD +G IS EL+ ++N V +I D E
Sbjct: 6 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFD--------RENKAG 57
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
++F EF T + + + D + FR +D+D +G I EL+ ++ G +L+D+ D
Sbjct: 58 VNFSEF-TGVWKYITDW------QNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHD 110
Query: 208 EMIREADIDGDGQVNYEVYTIYCV 231
+IR+ D G GQ+ ++ + C+
Sbjct: 111 ILIRKFDRQGRGQIAFDDFIQGCI 134
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
+ + FR +D+D +G I EL+ ++ G +L+D+ D +IR+ D G GQ+ ++
Sbjct: 72 DWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFD---- 127
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAA 188
DF + ++ R + + FR +D D +G+I +
Sbjct: 128 -DFIQGCIVLQR----------LTDIFRRYDTDQDGWIQVS 157
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 50/70 (71%), Gaps = 5/70 (7%)
Query: 85 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEG 144
SEEE+ + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++ D + DG+++Y+
Sbjct: 5 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD- 63
Query: 145 NGTIDFPEFL 154
+F EF+
Sbjct: 64 ----EFLEFM 69
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 46/61 (75%)
Query: 166 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEV 225
SEEE+ + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++ D + DG+++Y+
Sbjct: 5 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 64
Query: 226 Y 226
+
Sbjct: 65 F 65
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 16/144 (11%)
Query: 89 IREAFRVFDKDGNGFISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
+ F+ DKD +G IS EL+ ++N V +I D + VN
Sbjct: 27 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVN------ 80
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
F EF T + + + D + FR +D+D +G I EL+ ++ G +L+D+ D
Sbjct: 81 --FSEF-TGVWKYITDW------QNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHD 131
Query: 208 EMIREADIDGDGQVNYEVYTIYCV 231
+IR+ D G GQ+ ++ + C+
Sbjct: 132 ILIRKFDRQGRGQIAFDDFIQGCI 155
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
+ + FR +D+D +G I EL+ ++ G +L+D+ D +IR+ D G GQ+ ++
Sbjct: 93 DWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFD---- 148
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAA 188
DF + ++ R + + FR +D D +G+I +
Sbjct: 149 -DFIQGCIVLQR----------LTDIFRRYDTDQDGWIQVS 178
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 50/70 (71%), Gaps = 5/70 (7%)
Query: 85 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEG 144
SEEE+ + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++ D + DG+++Y+
Sbjct: 3 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD- 61
Query: 145 NGTIDFPEFL 154
+F EF+
Sbjct: 62 ----EFLEFM 67
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 46/61 (75%)
Query: 166 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEV 225
SEEE+ + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++ D + DG+++Y+
Sbjct: 3 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 62
Query: 226 Y 226
+
Sbjct: 63 F 63
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 50/70 (71%), Gaps = 5/70 (7%)
Query: 85 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEG 144
SEEE+ + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++ D + DG+++Y+
Sbjct: 4 SEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD- 62
Query: 145 NGTIDFPEFL 154
+F EF+
Sbjct: 63 ----EFLEFM 68
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 46/61 (75%)
Query: 166 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEV 225
SEEE+ + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++ D + DG+++Y+
Sbjct: 4 SEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 63
Query: 226 Y 226
+
Sbjct: 64 F 64
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 16/144 (11%)
Query: 89 IREAFRVFDKDGNGFISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
+ F+ DKD +G IS EL+ ++N V +I D E
Sbjct: 28 LWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFD--------RENKAG 79
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
++F EF T + + + D + FR +D+D +G I EL+ ++ G +L+D+ D
Sbjct: 80 VNFSEF-TGVWKYITDW------QNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHD 132
Query: 208 EMIREADIDGDGQVNYEVYTIYCV 231
+IR+ D G GQ+ ++ + C+
Sbjct: 133 ILIRKFDRQGRGQIAFDDFIQGCI 156
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
+ + FR +D+D +G I EL+ ++ G +L+D+ D +IR+ D G GQ+ ++
Sbjct: 94 DWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFD---- 149
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAA 188
DF + ++ R + + FR +D D +G+I +
Sbjct: 150 -DFIQGCIVLQR----------LTDIFRRYDTDQDGWIQVS 179
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 16/144 (11%)
Query: 89 IREAFRVFDKDGNGFISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
+ F+ DKD +G IS EL+ ++N V +I D E
Sbjct: 9 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFD--------RENKAG 60
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
++F EF T + + + D + FR +D+D +G I EL+ ++ G +L+D+ D
Sbjct: 61 VNFSEF-TGVWKYITDW------QNVFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHD 113
Query: 208 EMIREADIDGDGQVNYEVYTIYCV 231
+IR+ D G GQ+ ++ + C+
Sbjct: 114 ILIRKFDRQGRGQIAFDDFIQGCI 137
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
+ + FR +D+D +G I EL+ ++ G +L+D+ D +IR+ D G GQ+ ++
Sbjct: 75 DWQNVFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDILIRKFDRQGRGQIAFD---- 130
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAA 188
DF + ++ R + + FR +D D +G+I +
Sbjct: 131 -DFIQGCIVLQR----------LTDIFRRYDTDQDGWIQVS 160
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 50/70 (71%), Gaps = 5/70 (7%)
Query: 85 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEG 144
+EEE+ + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++ D + DG+++Y+
Sbjct: 8 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD- 66
Query: 145 NGTIDFPEFL 154
+F EF+
Sbjct: 67 ----EFLEFM 72
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 46/61 (75%)
Query: 166 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEV 225
+EEE+ + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++ D + DG+++Y+
Sbjct: 8 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 67
Query: 226 Y 226
+
Sbjct: 68 F 68
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 78/156 (50%), Gaps = 23/156 (14%)
Query: 85 SEEEIREAFRVFDKD-GNGFISAAELRHVMTNLGEKLTDEEVDEMI-READIDGDGQVNY 142
+E EI+E ++ F +D +G +S E + + N + E + R D +GDG
Sbjct: 23 TEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDG---- 78
Query: 143 EGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL----- 197
TIDF EF+ ++ + E++++ AF ++D DGNG+IS AE+ ++ +
Sbjct: 79 ----TIDFREFIIALSVTSRGK-LEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVS 133
Query: 198 -------GEKLTDEEVDEMIREADIDGDGQVNYEVY 226
E ++ +++ R+ D + DG+++ E +
Sbjct: 134 SVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEF 169
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 13/97 (13%)
Query: 59 FVYHGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL-- 116
F +G+GTIDF EF+ ++ + E++++ AF ++D DGNG+IS AE+ ++ +
Sbjct: 72 FDANGDGTIDFREFIIALSVTSRGK-LEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYK 130
Query: 117 ----------GEKLTDEEVDEMIREADIDGDGQVNYE 143
E ++ +++ R+ D + DG+++ E
Sbjct: 131 MVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLE 167
Score = 27.7 bits (60), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/106 (20%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Query: 36 LQDMINEVDADENVESNLQYAELFVYHGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 95
+QD++ D E+ E Y +G + EF + D+ + FR
Sbjct: 13 MQDLLESTDFTEH-EIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRT 71
Query: 96 FDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 141
FD +G+G I E ++ ++++ D+DG+G ++
Sbjct: 72 FDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYIS 117
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 70/150 (46%), Gaps = 18/150 (12%)
Query: 77 ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 136
AR M D +E+ E FR D DG+G IS EL +++ G + ++++ D +
Sbjct: 20 ARHMND---NQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNH 76
Query: 137 DGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN 196
G++ ++ D F+ M RE FR D G+G + + E+R + +
Sbjct: 77 SGEITFDEFK--DLHHFILSM-------------REGFRKRDSSGDGRLDSNEVRAALLS 121
Query: 197 LGEKLTDEEVDEMIREADIDGDGQVNYEVY 226
G +++++ ++R+ D G + ++ Y
Sbjct: 122 SGYQVSEQTFQALMRKFDRQRRGSLGFDDY 151
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 78/160 (48%), Gaps = 33/160 (20%)
Query: 89 IREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGTI 148
+ FR D++ G++S +L+ + L D ++ +G+ +
Sbjct: 31 LHHRFRALDRNKKGYLSRMDLQQIGALAVNPLGDRIIESFF------------PDGSQRV 78
Query: 149 DFPEFLTMMA--RKMKDTDSEEE--------------IREAFRVFDKDGNGFISAAELRH 192
DFP F+ ++A R ++D D+E + + AF+++D D +G IS E+
Sbjct: 79 DFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQ 138
Query: 193 VMTNL-GEKLTDEEV----DEMIREADIDGDGQVNYEVYT 227
V+ + G ++T+E++ D ++EAD DGDG V++ +T
Sbjct: 139 VLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFT 178
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 21/107 (19%)
Query: 57 ELFVYHGNGTIDFPEFLTMMA--RKMKDTDSEEE--------------IREAFRVFDKDG 100
E F G+ +DFP F+ ++A R ++D D+E + + AF+++D D
Sbjct: 68 ESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDR 127
Query: 101 NGFISAAELRHVMTNL-GEKLTDEEV----DEMIREADIDGDGQVNY 142
+G IS E+ V+ + G ++T+E++ D ++EAD DGDG V++
Sbjct: 128 DGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSF 174
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 55/221 (24%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQ---DMINEVDADENVESNLQYAELFVYHGNGT 66
DG G + KEL +++ L Q +A L+ +M VD QY + +G
Sbjct: 28 DGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVD---------QYGQ----RDDGK 74
Query: 67 IDFPEFLTMMAR--------KMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGE 118
I E ++ + + S EE + +R +D D +GFI EL++ + +L E
Sbjct: 75 IGIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLE 134
Query: 119 KLTD--------EEVDEMIREADIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTD----- 165
K E D M++ D + DG++ LT MAR + +
Sbjct: 135 KANKTVDDTKLAEYTDLMLKLFDSNNDGKLE------------LTEMARLLPVQENFLLK 182
Query: 166 ------SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK 200
+E +AF ++D+DGNG+I EL ++ +L EK
Sbjct: 183 FQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEK 223
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 68/146 (46%), Gaps = 16/146 (10%)
Query: 91 EAFRVFDKDGNGFISAAELRHVMTNL--GEKLTDEEVDEMIREADIDGDGQVNYEGNGTI 148
E + FD DG+G++ EL++++ L K E+ ++ +D GQ + G +
Sbjct: 20 EIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTF-VDQYGQRDDGKIGIV 78
Query: 149 DFPEFLT-----MMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD 203
+ L ++ + + S EE + +R +D D +GFI EL++ + +L EK
Sbjct: 79 ELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANK 138
Query: 204 --------EEVDEMIREADIDGDGQV 221
E D M++ D + DG++
Sbjct: 139 TVDDTKLAEYTDLMLKLFDSNNDGKL 164
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 62/145 (42%), Gaps = 17/145 (11%)
Query: 93 FRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGTIDFPE 152
FR D+DG+ + A E R + LG L E + + R+ D + G+GT+D E
Sbjct: 43 FRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRN--------GSGTLDLEE 94
Query: 153 FLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELR-------HVMTNLGEKLTDEE 205
FL + M E I AF D+ G+G ++ +LR H GE DE
Sbjct: 95 FLRALRPPMSQA-REAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEV 153
Query: 206 VDEMIREAD-IDGDGQVNYEVYTIY 229
+ + D + DGQV + Y
Sbjct: 154 LRRFLDNFDSSEKDGQVTLAEFQDY 178
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 9/88 (10%)
Query: 62 HGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELR-------HVMT 114
+G+GT+D EFL + M E I AF D+ G+G ++ +LR H
Sbjct: 85 NGSGTLDLEEFLRALRPPMSQA-REAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKV 143
Query: 115 NLGEKLTDEEVDEMIREAD-IDGDGQVN 141
GE DE + + D + DGQV
Sbjct: 144 RSGEWTEDEVLRRFLDNFDSSEKDGQVT 171
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 87 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNG 146
EE+REAFR FDKD +G+I+ +L + M +G T+ E+ E+ + Q+N G
Sbjct: 10 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQ--------QINMNLGG 61
Query: 147 TIDFPEFLTMMARKM 161
+DF +F+ +M K+
Sbjct: 62 HVDFDDFVELMGPKL 76
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 44/68 (64%), Gaps = 4/68 (5%)
Query: 168 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYT 227
EE+REAFR FDKD +G+I+ +L + M +G T+ E+ E+ ++ +++ G V+++ +
Sbjct: 10 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDF- 68
Query: 228 IYCVHIMG 235
V +MG
Sbjct: 69 ---VELMG 73
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 16/71 (22%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
D DG I ++LG MR++G PTE EL ++ + + NL G +DF
Sbjct: 22 DKDGYINCRDLGNCMRTMGYMPTEMEL------IELSQQINMNL----------GGHVDF 65
Query: 70 PEFLTMMARKM 80
+F+ +M K+
Sbjct: 66 DDFVELMGPKL 76
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
Query: 78 RKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGD 137
+K+ + ++E +EAF++FDKD + ++A EL VM LG T +++ E++++ D D
Sbjct: 5 KKVLTAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNS 64
Query: 138 GQVNYEGNGTIDFPEFLTMMARKMKDTDS 166
G+ + E FLT+M ++ DS
Sbjct: 65 GKFDQET--------FLTIMLEYGQEVDS 85
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 43/68 (63%)
Query: 159 RKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGD 218
+K+ + ++E +EAF++FDKD + ++A EL VM LG T +++ E++++ D D
Sbjct: 5 KKVLTAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNS 64
Query: 219 GQVNYEVY 226
G+ + E +
Sbjct: 65 GKFDQETF 72
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 16/76 (21%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
D D +T +ELGTVMR+LG NPT+ ++ +++ + D D +G D
Sbjct: 26 DNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKD----------------NSGKFDQ 69
Query: 70 PEFLTMMARKMKDTDS 85
FLT+M ++ DS
Sbjct: 70 ETFLTIMLEYGQEVDS 85
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
Length = 76
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 12/79 (15%)
Query: 85 SEEEIREAFRVFD-KDGN-GFISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQV 140
S EEI+ AF VF K+G+ IS EL+ VM LG L +DEMI E D +GDG+V
Sbjct: 3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEV 62
Query: 141 NYEGNGTIDFPEFLTMMAR 159
++E EFL MM +
Sbjct: 63 SFE--------EFLVMMKK 73
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 166 SEEEIREAFRVFD-KDGN-GFISAAELRHVMTNLGEKLTD--EEVDEMIREADIDGDGQV 221
S EEI+ AF VF K+G+ IS EL+ VM LG L +DEMI E D +GDG+V
Sbjct: 3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEV 62
Query: 222 NYEVYTIYCVHI 233
++E + + I
Sbjct: 63 SFEEFLVMMKKI 74
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 18/66 (27%)
Query: 15 ITTKELGTVMRSLGQNPTE--AELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPEF 72
I+ +EL VM++LG + + + L +MI EVD +G+G + F EF
Sbjct: 24 ISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDK----------------NGDGEVSFEEF 67
Query: 73 LTMMAR 78
L MM +
Sbjct: 68 LVMMKK 73
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 18/144 (12%)
Query: 89 IREAFRVFDKDGNGFISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
+ F+ DKD +G IS EL+ ++N V +I D E
Sbjct: 6 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFD--------RENKAG 57
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 207
++F EF T + + + D + FR +D+D +G I EL+ ++ G +L+D+ D
Sbjct: 58 VNFSEF-TGVWKYITDW------QNVFRTYDRDNSGMIDKNELKQALS--GYRLSDQFHD 108
Query: 208 EMIREADIDGDGQVNYEVYTIYCV 231
+IR+ D G GQ+ ++ + C+
Sbjct: 109 ILIRKFDRQGRGQIAFDDFIQGCI 132
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 17/101 (16%)
Query: 88 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
+ + FR +D+D +G I EL+ ++ G +L+D+ D +IR+ D G GQ+ ++
Sbjct: 72 DWQNVFRTYDRDNSGMIDKNELKQALS--GYRLSDQFHDILIRKFDRQGRGQIAFD---- 125
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAA 188
DF + ++ R + + FR +D D +G+I +
Sbjct: 126 -DFIQGCIVLQR----------LTDIFRRYDTDQDGWIQVS 155
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
Query: 84 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 143
+ ++EI+EAF +FD + G I EL+ M LG + E+ E++ E D E
Sbjct: 4 EQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYD--------RE 55
Query: 144 GNGTIDFPEFLTMMARKMKDTD 165
GNG I F +FL +M K+K+ D
Sbjct: 56 GNGYIGFDDFLDIMTEKIKNRD 77
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 165 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 224
+ ++EI+EAF +FD + G I EL+ M LG + E+ E++ E D +G+G + ++
Sbjct: 4 EQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFD 63
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 16/72 (22%)
Query: 13 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPEF 72
G+I EL MR+LG + + E+ +++NE D + GNG I F +F
Sbjct: 22 GSIDYHELKVAMRALGFDVKKPEILELMNEYDRE----------------GNGYIGFDDF 65
Query: 73 LTMMARKMKDTD 84
L +M K+K+ D
Sbjct: 66 LDIMTEKIKNRD 77
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 76/141 (53%), Gaps = 18/141 (12%)
Query: 93 FRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA-DIDGDGQVNYEGNGTIDFP 151
F+ D +G+G +S E++ +++ + +E++ ++I +A DID GNG ID
Sbjct: 6 FKQLDANGDGSVSYEEVKAFVSS-KRPIKNEQLLQLIFKAIDID--------GNGEIDLA 56
Query: 152 EFLTMMARKMKDTDSEEE---IREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 208
EF T A +K+ D +E ++ +++ D DG+G ++ E +T +K E+V +
Sbjct: 57 EF-TKFAAAVKEQDLSDEKVGLKILYKLMDADGDGKLTKEE----VTTFFKKFGYEKVVD 111
Query: 209 MIREADIDGDGQVNYEVYTIY 229
I +AD +GDG + E + +
Sbjct: 112 QIMKADANGDGYITLEEFLAF 132
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 24/137 (17%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
+GDG+++ +E+ + S E LQ + +D D GNG ID
Sbjct: 12 NGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDID----------------GNGEIDL 55
Query: 70 PEFLTMMARKMKDTDSEEE---IREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 126
EF T A +K+ D +E ++ +++ D DG+G ++ E +T +K E+V
Sbjct: 56 AEF-TKFAAAVKEQDLSDEKVGLKILYKLMDADGDGKLTKEE----VTTFFKKFGYEKVV 110
Query: 127 EMIREADIDGDGQVNYE 143
+ I +AD +GDG + E
Sbjct: 111 DQIMKADANGDGYITLE 127
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 174 FRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA-DIDGDGQVNYEVYTIYCVH 232
F+ D +G+G +S E++ +++ + +E++ ++I +A DIDG+G+++ +T +
Sbjct: 6 FKQLDANGDGSVSYEEVKAFVSS-KRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFAAA 64
Query: 233 I 233
+
Sbjct: 65 V 65
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 174 FRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTIY 229
F+ FD +G+G ISAAEL + LG +T +EV M+ E D DGDG ++++ +T +
Sbjct: 15 FKRFDANGDGKISAAELGEALKTLGS-ITPDEVKHMMAEIDTDGDGFISFQEFTDF 69
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 93 FRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 143
F+ FD +G+G ISAAEL + LG +T +EV M+ E D DGDG ++++
Sbjct: 15 FKRFDANGDGKISAAELGEALKTLGS-ITPDEVKHMMAEIDTDGDGFISFQ 64
Score = 32.0 bits (71), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 17/63 (26%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
+GDG I+ ELG +++LG + T E++ M+ E+D D G+G I F
Sbjct: 21 NGDGKISAAELGEALKTLG-SITPDEVKHMMAEIDTD----------------GDGFISF 63
Query: 70 PEF 72
EF
Sbjct: 64 QEF 66
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 14/103 (13%)
Query: 60 VYHGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL--- 116
+ GT D+ F ++ K K ++ +++E F + DKD +GFI EL+ V+
Sbjct: 17 AFKDPGTFDYKRFFHLVGLKGK---TDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAH 73
Query: 117 GEKLTDEEVDEMIREADIDGDGQVNYEGNGTIDFPEFLTMMAR 159
G L D E ++ D D DG++ + EF M+A+
Sbjct: 74 GRDLNDTETKALLAAGDSDHDGKIGAD--------EFAKMVAQ 108
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 142 YEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL---G 198
++ GT D+ F ++ K K ++ +++E F + DKD +GFI EL+ V+ G
Sbjct: 18 FKDPGTFDYKRFFHLVGLKGK---TDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHG 74
Query: 199 EKLTDEEVDEMIREADIDGDGQVNYEVYT 227
L D E ++ D D DG++ + +
Sbjct: 75 RDLNDTETKALLAAGDSDHDGKIGADEFA 103
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 143 EGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL---GE 199
+ G+ + +F ++ K S ++++ F+ D D +GFI EL+ V+ + G
Sbjct: 20 KAEGSFNHKKFFALVGLKAM---SANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGR 76
Query: 200 KLTDEEVDEMIREADIDGDGQVNYEVY 226
LTD E ++ AD DGDG++ + +
Sbjct: 77 DLTDAETKAFLKAADKDGDGKIGIDEF 103
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 65 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL---GEKLT 121
G+ + +F ++ K S ++++ F+ D D +GFI EL+ V+ + G LT
Sbjct: 23 GSFNHKKFFALVGLKAM---SANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLT 79
Query: 122 DEEVDEMIREADIDGDGQV 140
D E ++ AD DGDG++
Sbjct: 80 DAETKAFLKAADKDGDGKI 98
>pdb|2AUC|A Chain A, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|B Chain B, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|C Chain C, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
Length = 126
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 65/131 (49%), Gaps = 16/131 (12%)
Query: 98 KDGNGFISAAELRHVMTNLGEKLTDEEVDEM-IREADIDGDGQVNYEGNGTIDFPEFLTM 156
K NG + + H LG L DE IR D+ GD ++ + ++L
Sbjct: 7 KSSNGKLRIEDASHNARKLG--LAPSSTDEKKIR--DLYGD---------SLTYEQYLEY 53
Query: 157 MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADID 216
+ + D D+ EE+ + F FD + +GF++ + ++++T G+ LT++E ++ +
Sbjct: 54 LTXCVHDRDNXEELIKXFSHFDNNSSGFLTKNQXKNILTTWGDALTEQEANDALNA--FS 111
Query: 217 GDGQVNYEVYT 227
+ ++NY+++
Sbjct: 112 SEDRINYKLFC 122
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 66 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 125
++ + ++L + + D D+ EE+ + F FD + +GF++ + ++++T G+ LT++E
Sbjct: 44 SLTYEQYLEYLTXCVHDRDNXEELIKXFSHFDNNSSGFLTKNQXKNILTTWGDALTEQEA 103
Query: 126 DEMIREADIDGDGQVNYE 143
++ + + ++NY+
Sbjct: 104 NDALNA--FSSEDRINYK 119
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 168 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYT 227
+++ F+ FD +G+G IS +EL + LG D EV M+ E D DGDG +++ +
Sbjct: 3 DDMERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEFI 61
Query: 228 IYC 230
+C
Sbjct: 62 SFC 64
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 9/69 (13%)
Query: 87 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNG 146
+++ F+ FD +G+G IS +EL + LG D EV M+ E D DGD G
Sbjct: 3 DDMERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGD--------G 53
Query: 147 TIDFPEFLT 155
IDF EF++
Sbjct: 54 FIDFNEFIS 62
Score = 34.7 bits (78), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 17/65 (26%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
+GDG I+ EL +R+LG + E+Q M+ E+D D G+G IDF
Sbjct: 15 NGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTD----------------GDGFIDF 57
Query: 70 PEFLT 74
EF++
Sbjct: 58 NEFIS 62
>pdb|1SJJ|A Chain A, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
pdb|1SJJ|B Chain B, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
Length = 863
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 68/149 (45%), Gaps = 28/149 (18%)
Query: 62 HGNGTID-----FPEFLTMMARKMKDTDSE--------------EEIREAFRVFDKDGNG 102
H N T++ + + LT +AR + + +++ E R +F FD+ G
Sbjct: 681 HTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRKKTG 740
Query: 103 FISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGTIDFPEFLTMMARKMK 162
+ + R + ++G + + E ++ D + G V ++ F+ M+R+
Sbjct: 741 MMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQA--------FIDFMSRETA 792
Query: 163 DTDSEEEIREAFRVFDKDGNGFISAAELR 191
DTD+ +++ +F++ D N +I+ ELR
Sbjct: 793 DTDTADQVMASFKILAGDKN-YITVDELR 820
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 27/145 (18%)
Query: 13 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPEF 72
G + ++ + S+G N EAE +++ VD + G + F F
Sbjct: 740 GMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRM----------------GVVTFQAF 783
Query: 73 LTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 132
+ M+R+ DTD+ +++ +F++ D N +I+ ELR E D+ + R A
Sbjct: 784 IDFMSRETADTDTADQVMASFKILAGDKN-YITVDELRR------ELPPDQAEYCIARMA 836
Query: 133 DIDGDGQVNYEGNGTIDFPEFLTMM 157
+G V G +D+ F T +
Sbjct: 837 PYNGRDAV----PGALDYMSFSTAL 857
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 159 RKMKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADI 215
+ M + SEEEI +E F++ D D +G I+ EL+ + +G +L + E+ +++ ADI
Sbjct: 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADI 70
Query: 216 DGDGQVNYEVYTIYCVH 232
D G ++Y + VH
Sbjct: 71 DKSGTIDYGEFIAATVH 87
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 9/84 (10%)
Query: 62 HGNGTIDFPEFLTMMARKMKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGE 118
H +G ID + MA ++ SEEEI +E F++ D D +G I+ EL+ + +G
Sbjct: 1 HSSGHIDDDD--KHMAERL----SEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGS 54
Query: 119 KLTDEEVDEMIREADIDGDGQVNY 142
+L + E+ +++ ADID G ++Y
Sbjct: 55 ELMESEIKDLMDAADIDKSGTIDY 78
Score = 31.2 bits (69), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 16/65 (24%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
D GTIT EL ++ +G E+E++D+++ D D+ +GTID+
Sbjct: 35 DNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDK----------------SGTIDY 78
Query: 70 PEFLT 74
EF+
Sbjct: 79 GEFIA 83
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 168 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYT 227
+++ F+ FD +G+G IS +EL + LG D EV M+ E D DGDG +++ +
Sbjct: 2 DDMERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEFI 60
Query: 228 IYC 230
+C
Sbjct: 61 SFC 63
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 87 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNG 146
+++ F+ FD +G+G IS +EL + LG D EV M+ E D DGD G
Sbjct: 2 DDMERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGD--------G 52
Query: 147 TIDFPEFLTM 156
IDF EF++
Sbjct: 53 FIDFNEFISF 62
Score = 34.7 bits (78), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 17/66 (25%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
+GDG I+ EL +R+LG + E+Q M+ E+D D G+G IDF
Sbjct: 14 NGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTD----------------GDGFIDF 56
Query: 70 PEFLTM 75
EF++
Sbjct: 57 NEFISF 62
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 174 FRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTIYC 230
F+ FD +G+G IS++EL + LG +T +EV M+ E D DGDG ++++ +T +
Sbjct: 17 FKRFDTNGDGKISSSELGDALKTLGS-VTPDEVRRMMAEIDTDGDGFISFDEFTDFA 72
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 93 FRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 143
F+ FD +G+G IS++EL + LG +T +EV M+ E D DGDG ++++
Sbjct: 17 FKRFDTNGDGKISSSELGDALKTLGS-VTPDEVRRMMAEIDTDGDGFISFD 66
Score = 31.6 bits (70), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 17/63 (26%)
Query: 10 DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDF 69
+GDG I++ ELG +++LG + T E++ M+ E+D D G+G I F
Sbjct: 23 NGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTD----------------GDGFISF 65
Query: 70 PEF 72
EF
Sbjct: 66 DEF 68
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 164 TDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL---GEKLTDEEVDEMIREADIDGDGQ 220
+ S +++++AF + D+D +GFI EL+ + N LTD E ++ D DGDG+
Sbjct: 37 SKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGK 96
Query: 221 VNYEVYT 227
+ + +T
Sbjct: 97 IGVDEWT 103
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 83 TDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL---GEKLTDEEVDEMIREADIDGDGQ 139
+ S +++++AF + D+D +GFI EL+ + N LTD E ++ D DGDG+
Sbjct: 37 SKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGK 96
Query: 140 V 140
+
Sbjct: 97 I 97
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 19/110 (17%)
Query: 93 FRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGTIDFPE 152
F VFDKD NGFI E V++ +E++ D++ DG + ++ E
Sbjct: 69 FTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFD--------E 120
Query: 153 FLTMMARKMK-----------DTDSEEEIREAFRVFDKDGNGFISAAELR 191
LT++A K + E +++ F++ DK+ +G+I+ E R
Sbjct: 121 MLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFR 170
Score = 33.9 bits (76), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 174 FRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY-EVYTI 228
F VFDKD NGFI E V++ +E++ D++ DG + + E+ TI
Sbjct: 69 FTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTI 124
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 143 EGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL 197
+ NG I F EF+T+++ + T EE++ AF ++D + +G+I+ E+ ++ ++
Sbjct: 75 DNNGFIHFEEFITVLSTTSRGT-LEEKLSWAFELYDLNHDGYITFDEMLTIVASV 128
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 12/75 (16%)
Query: 48 NVESNLQYA-ELFVYHGNGTIDFPEFLTMMARKMK-----------DTDSEEEIREAFRV 95
+E L +A EL+ + +G I F E LT++A K + E +++ F++
Sbjct: 96 TLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKL 155
Query: 96 FDKDGNGFISAAELR 110
DK+ +G+I+ E R
Sbjct: 156 MDKNEDGYITLDEFR 170
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 164 TDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL---GEKLTDEEVDEMIREADIDGDGQ 220
+ S +++++AF + D+D +GFI EL+ + N LTD E ++ D DGDG+
Sbjct: 38 SKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGK 97
Query: 221 VNYEVYT 227
+ + +T
Sbjct: 98 IGVDEFT 104
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 83 TDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL---GEKLTDEEVDEMIREADIDGDGQ 139
+ S +++++AF + D+D +GFI EL+ + N LTD E ++ D DGDG+
Sbjct: 38 SKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGK 97
Query: 140 VNYE 143
+ +
Sbjct: 98 IGVD 101
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 26/115 (22%)
Query: 125 VDEMIREADIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGF 184
V+ M R D +GD TIDF E++ + ++ T E +++ F+++DKD NG
Sbjct: 61 VEAMFRAFDTNGDN--------TIDFLEYVAALNLVLRGT-LEHKLKWTFKIYDKDRNGC 111
Query: 185 ISAAELRHVMTNL----------------GEKLTDEE-VDEMIREADIDGDGQVN 222
I EL ++ ++ G+ LT EE VD + D +GDGQ++
Sbjct: 112 IDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLS 166
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 22/113 (19%)
Query: 50 ESNLQYAEL----FVYHGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFIS 105
E QY E F +G+ TIDF E++ + ++ T E +++ F+++DKD NG I
Sbjct: 55 EEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGT-LEHKLKWTFKIYDKDRNGCID 113
Query: 106 AAELRHVMTNL----------------GEKLTDEE-VDEMIREADIDGDGQVN 141
EL ++ ++ G+ LT EE VD + D +GDGQ++
Sbjct: 114 RQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLS 166
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 147 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD--- 203
+ D +F M+ K K D ++++ F + DKD +GFI EL ++ D
Sbjct: 23 SFDHKKFFQMVGLKKKSAD---DVKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSA 79
Query: 204 EEVDEMIREADIDGDGQVNYEVYTIYCV 231
+E ++ D DGDG++ E ++
Sbjct: 80 KETKTLMAAGDKDGDGKIGVEEFSTLVA 107
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 14/96 (14%)
Query: 66 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD--- 122
+ D +F M+ K K D ++++ F + DKD +GFI EL ++ D
Sbjct: 23 SFDHKKFFQMVGLKKKSAD---DVKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSA 79
Query: 123 EEVDEMIREADIDGDGQVNYEGNGTIDFPEFLTMMA 158
+E ++ D DGDG++ E EF T++A
Sbjct: 80 KETKTLMAAGDKDGDGKIGVE--------EFSTLVA 107
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 147 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL---GEKLTD 203
+ D +F M+ K K S +++++ F + DKD +GFI EL ++ L+
Sbjct: 23 SFDHKKFFQMVGLKKK---SADDVKKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSA 79
Query: 204 EEVDEMIREADIDGDGQVNYEVYTIYCV 231
+E ++ D DGDG++ E ++
Sbjct: 80 KETKTLMAAGDKDGDGKIGVEEFSTLVA 107
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 14/96 (14%)
Query: 66 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL---GEKLTD 122
+ D +F M+ K K S +++++ F + DKD +GFI EL ++ L+
Sbjct: 23 SFDHKKFFQMVGLKKK---SADDVKKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSA 79
Query: 123 EEVDEMIREADIDGDGQVNYEGNGTIDFPEFLTMMA 158
+E ++ D DGDG++ E EF T++A
Sbjct: 80 KETKTLMAAGDKDGDGKIGVE--------EFSTLVA 107
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 147 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL---GEKLTD 203
+ D +F M+ K K D ++++ F + DKD +GFI EL ++ L+
Sbjct: 23 SFDHKKFFQMVGLKKKSAD---DVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSA 79
Query: 204 EEVDEMIREADIDGDGQVNYEVYTIYCV 231
+E ++ D DGDG++ E ++
Sbjct: 80 KETKTLMAAGDKDGDGKIGVEEFSTLVA 107
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 14/96 (14%)
Query: 66 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL---GEKLTD 122
+ D +F M+ K K D ++++ F + DKD +GFI EL ++ L+
Sbjct: 23 SFDHKKFFQMVGLKKKSAD---DVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSA 79
Query: 123 EEVDEMIREADIDGDGQVNYEGNGTIDFPEFLTMMA 158
+E ++ D DGDG++ E EF T++A
Sbjct: 80 KETKTLMAAGDKDGDGKIGVE--------EFSTLVA 107
>pdb|2QAC|A Chain A, The Closed Mtip-myosina-tail Complex From The Malaria
Parasite Invasion Machinery
pdb|4AOM|A Chain A, Mtip And Myoa Complex
Length = 146
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 38/59 (64%)
Query: 67 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 125
+ + ++L ++ + D D+ EE+ + F FD + G+++ +++++++T G+ LTD+E
Sbjct: 64 LTYEQYLEYLSICVHDKDNVEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEA 122
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 38/59 (64%)
Query: 148 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 206
+ + ++L ++ + D D+ EE+ + F FD + G+++ +++++++T G+ LTD+E
Sbjct: 64 LTYEQYLEYLSICVHDKDNVEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEA 122
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 166 SEEEIREAFRVFDKDGNGFISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVN 222
S ++I++AF V D+D +GFI EL+ V + LTD E ++ D DGDG +
Sbjct: 40 SADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIG 99
Query: 223 YEVYT 227
+ +
Sbjct: 100 VDEWA 104
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 85 SEEEIREAFRVFDKDGNGFISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVN 141
S ++I++AF V D+D +GFI EL+ V + LTD E ++ D DGDG +
Sbjct: 40 SADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIG 99
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 11/107 (10%)
Query: 40 INEVDADENVESNLQYAELFVYHGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKD 99
I ++ + +++ES L + + ++ F + + K D +I++ F + D+D
Sbjct: 3 ITDILSAKDIESALSSCQ-----AADSFNYKSFFSTVGLSSKTPD---QIKKVFGILDQD 54
Query: 100 GNGFISAAELRHVMTNLGEK---LTDEEVDEMIREADIDGDGQVNYE 143
+GFI EL+ + N LT E + D DGDG++ E
Sbjct: 55 KSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVE 101
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 147 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK---LTD 203
+ ++ F + + K D +I++ F + D+D +GFI EL+ + N LT
Sbjct: 24 SFNYKSFFSTVGLSSKTPD---QIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTS 80
Query: 204 EEVDEMIREADIDGDGQVNYEVY 226
E + D DGDG++ E +
Sbjct: 81 AETKAFLAAGDTDGDGKIGVEEF 103
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 14/100 (14%)
Query: 47 ENVESNLQYAELFVYHGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISA 106
E+ S+ Q A+ F Y F + + K D +I++ F + D+D +GFI
Sbjct: 12 ESALSSCQAADSFNYK--------SFFSTVGLSSKTPD---QIKKVFGILDQDKSGFIEE 60
Query: 107 AELRHVMTNLGEK---LTDEEVDEMIREADIDGDGQVNYE 143
EL+ + N LT E + D DGDG++ E
Sbjct: 61 EELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVE 100
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 147 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK---LTD 203
+ ++ F + + K D +I++ F + D+D +GFI EL+ + N LT
Sbjct: 23 SFNYKSFFSTVGLSSKTPD---QIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTS 79
Query: 204 EEVDEMIREADIDGDGQVNYEVY 226
E + D DGDG++ E +
Sbjct: 80 AETKAFLAAGDTDGDGKIGVEEF 102
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 166 SEEEIREAFRVFDKDGNGFISAAELRHVMTNL---GEKLTDEEVDEMIREADIDGDGQVN 222
S +++E FR+ D D +GFI EL++ + LT E + AD DGDG++
Sbjct: 39 SSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIG 98
Query: 223 YEVY 226
E +
Sbjct: 99 AEEF 102
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 85 SEEEIREAFRVFDKDGNGFISAAELRHVMTNL---GEKLTDEEVDEMIREADIDGDGQVN 141
S +++E FR+ D D +GFI EL++ + LT E + AD DGDG++
Sbjct: 39 SSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIG 98
Query: 142 YE 143
E
Sbjct: 99 AE 100
>pdb|1B9A|A Chain A, Parvalbumin (Mutation;d51a, F102w)
Length = 108
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 164 TDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL---GEKLTDEEVDEMIREADIDGDGQ 220
+ S +++++AF + +D +GFI EL+ + N LTD E ++ D DGDG+
Sbjct: 37 SKSADDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGK 96
Query: 221 VNYEVYT 227
+ + +T
Sbjct: 97 IGVDEWT 103
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 83 TDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL---GEKLTDEEVDEMIREADIDGDGQ 139
+ S +++++AF + +D +GFI EL+ + N LTD E ++ D DGDG+
Sbjct: 37 SKSADDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGK 96
Query: 140 V 140
+
Sbjct: 97 I 97
>pdb|1B8C|A Chain A, Parvalbumin
pdb|1B8C|B Chain B, Parvalbumin
pdb|1B8L|A Chain A, Calcium-Bound D51aE101DF102W TRIPLE MUTANT OF BETA CARP
Parvalbumin
Length = 108
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 164 TDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL---GEKLTDEEVDEMIREADIDGDGQ 220
+ S +++++AF + +D +GFI EL+ + N LTD E ++ D DGDG+
Sbjct: 37 SKSADDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGK 96
Query: 221 VNYEVYT 227
+ + +T
Sbjct: 97 IGVDDWT 103
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 83 TDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL---GEKLTDEEVDEMIREADIDGDGQ 139
+ S +++++AF + +D +GFI EL+ + N LTD E ++ D DGDG+
Sbjct: 37 SKSADDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGK 96
Query: 140 VNYE 143
+ +
Sbjct: 97 IGVD 100
>pdb|3H4S|E Chain E, Structure Of The Complex Of A Mitotic Kinesin With Its
Calcium Binding Regulator
Length = 135
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 150 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG-EKLTDEEVDE 208
+ + L +MA KM + E+ + F + I+A LR LG E ++ E+
Sbjct: 22 YEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQG 81
Query: 209 MIREADIDGDGQVNYEVYTIYCVHI 233
M+RE D+DGDG +N + + V +
Sbjct: 82 MVREGDLDGDGALNQTEFCVLMVRL 106
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query: 69 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG-EKLTDEEVDE 127
+ + L +MA KM + E+ + F + I+A LR LG E ++ E+
Sbjct: 22 YEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQG 81
Query: 128 MIREADIDGDGQVNYEGNGTIDFPEFLTMMAR 159
M+RE D+DGDG +N EF +M R
Sbjct: 82 MVREGDLDGDGALNQT--------EFCVLMVR 105
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 164 TDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL---GEKLTDEEVDEMIREADIDGDGQ 220
+ S +++++AF V D+D +GFI EL+ + N LTD E + + D DGDG
Sbjct: 37 SKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGM 96
Query: 221 VNYEVYT 227
+ + +
Sbjct: 97 IGVDEFA 103
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 83 TDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL---GEKLTDEEVDEMIREADIDGDGQ 139
+ S +++++AF V D+D +GFI EL+ + N LTD E + + D DGDG
Sbjct: 37 SKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGM 96
Query: 140 V 140
+
Sbjct: 97 I 97
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 56/105 (53%), Gaps = 12/105 (11%)
Query: 128 MIREADIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISA 187
+ +E D++GDG V+YE + F++ K + +E+ ++ F+ D DGNG I
Sbjct: 5 LFKEIDVNGDGAVSYE-----EVKAFVS----KKRAIKNEQLLQLIFKSIDADGNGEIDQ 55
Query: 188 AELRHVMTNL-GEKLTDEEV--DEMIREADIDGDGQVNYEVYTIY 229
E ++ G+ L+D+++ + + D+DGDG++ E T +
Sbjct: 56 NEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSF 100
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 9 LDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTID 68
++GDG ++ +E+ + E LQ + +DAD GNG ID
Sbjct: 11 VNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDAD----------------GNGEID 54
Query: 69 FPEFLTMMARKMKDTDSEEEI--REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 126
EF S+++I + +++ D DG+G ++ E+ T+ +K E+V
Sbjct: 55 QNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEV----TSFFKKHGIEKVA 110
Query: 127 EMIREADIDGDGQVNYEGNGTIDFPEF 153
E + +AD +GDG + E +F EF
Sbjct: 111 EQVMKADANGDGYITLE-----EFLEF 132
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 71/142 (50%), Gaps = 16/142 (11%)
Query: 93 FRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI-READIDGDGQVNYEGNGTIDFP 151
F+ D +G+G +S E++ ++ + +E++ ++I + D D GNG ID
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSK-KRAIKNEQLLQLIFKSIDAD--------GNGEIDQN 56
Query: 152 EFLTMMARKMKDTDSEEEI--REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 209
EF S+++I + +++ D DG+G ++ E+ T+ +K E+V E
Sbjct: 57 EFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEV----TSFFKKHGIEKVAEQ 112
Query: 210 IREADIDGDGQVNYEVYTIYCV 231
+ +AD +GDG + E + + +
Sbjct: 113 VMKADANGDGYITLEEFLEFSL 134
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 56/105 (53%), Gaps = 12/105 (11%)
Query: 128 MIREADIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISA 187
+ +E D++GDG V+YE + F++ K + +E+ ++ F+ D DGNG I
Sbjct: 5 LFKEIDVNGDGAVSYE-----EVKAFVS----KKRAIKNEQLLQLIFKSIDADGNGEIDQ 55
Query: 188 AELRHVMTNL-GEKLTDEEV--DEMIREADIDGDGQVNYEVYTIY 229
E ++ G+ L+D+++ + + D+DGDG++ E T +
Sbjct: 56 NEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSF 100
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 9 LDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTID 68
++GDG ++ +E+ + E LQ + +DAD GNG ID
Sbjct: 11 VNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDAD----------------GNGEID 54
Query: 69 FPEFLTMMARKMKDTDSEEEI--REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 126
EF S+++I + +++ D DG+G ++ E +T+ +K E+V
Sbjct: 55 QNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEE----VTSFFKKHGIEKVA 110
Query: 127 EMIREADIDGDGQVNYEGNGTIDFPEF 153
E + +AD +GDG + E +F EF
Sbjct: 111 EQVMKADANGDGYITLE-----EFLEF 132
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 71/142 (50%), Gaps = 16/142 (11%)
Query: 93 FRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI-READIDGDGQVNYEGNGTIDFP 151
F+ D +G+G +S E++ ++ + +E++ ++I + D D GNG ID
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSK-KRAIKNEQLLQLIFKSIDAD--------GNGEIDQN 56
Query: 152 EFLTMMARKMKDTDSEEEI--REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 209
EF S+++I + +++ D DG+G ++ E +T+ +K E+V E
Sbjct: 57 EFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEE----VTSFFKKHGIEKVAEQ 112
Query: 210 IREADIDGDGQVNYEVYTIYCV 231
+ +AD +GDG + E + + +
Sbjct: 113 VMKADANGDGYITLEEFLEFSL 134
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 171 REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTIYC 230
+ F FDK+ +G +S E R V T E++ + E D+DG+G++N + +T C
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFT-SC 62
Query: 231 VHIM 234
+ M
Sbjct: 63 IEKM 66
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 90 REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 141
+ F FDK+ +G +S E R V T E++ + E D+DG+G++N
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELN 55
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 166 SEEEIREAFRVFDKDGNGFISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVN 222
S ++I++AF D+D +GFI EL+ V LTD E ++ D DGDG +
Sbjct: 40 SADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIG 99
Query: 223 YEVYT 227
E +
Sbjct: 100 VEEWV 104
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 85 SEEEIREAFRVFDKDGNGFISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVN 141
S ++I++AF D+D +GFI EL+ V LTD E ++ D DGDG +
Sbjct: 40 SADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIG 99
Query: 142 YE 143
E
Sbjct: 100 VE 101
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 166 SEEEIREAFRVFDKDGNGFISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVN 222
S ++I++AF D+D +GFI EL+ V LTD E ++ D DGDG +
Sbjct: 39 SADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIG 98
Query: 223 YEVYT 227
E +
Sbjct: 99 VEEWV 103
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 85 SEEEIREAFRVFDKDGNGFISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVN 141
S ++I++AF D+D +GFI EL+ V LTD E ++ D DGDG +
Sbjct: 39 SADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIG 98
Query: 142 YE 143
E
Sbjct: 99 VE 100
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 142 YEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL---G 198
+ + D +F M+ K K S +++++ F + DKD +GFI EL ++
Sbjct: 19 FSATDSFDHKKFFQMVGLKKK---SADDVKKVFHMLDKDKSGFIEEDELGFILKGFSPDA 75
Query: 199 EKLTDEEVDEMIREADIDGDGQVNYEVYTIYCV 231
L+ +E ++ D DGDG++ + ++
Sbjct: 76 RDLSAKETKMLMAAGDKDGDGKIGVDEFSTLVA 108
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 14/102 (13%)
Query: 60 VYHGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL--- 116
+ + D +F M+ K K S +++++ F + DKD +GFI EL ++
Sbjct: 18 AFSATDSFDHKKFFQMVGLKKK---SADDVKKVFHMLDKDKSGFIEEDELGFILKGFSPD 74
Query: 117 GEKLTDEEVDEMIREADIDGDGQVNYEGNGTIDFPEFLTMMA 158
L+ +E ++ D DGDG++ + EF T++A
Sbjct: 75 ARDLSAKETKMLMAAGDKDGDGKIGVD--------EFSTLVA 108
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
Query: 142 YEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL---G 198
+ + D +F M+ K K D ++++ F + DKD +GFI EL ++
Sbjct: 18 FTAADSFDHKKFFQMVGLKKKSAD---DVKKVFHILDKDKSGFIEEDELGSILKGFSSDA 74
Query: 199 EKLTDEEVDEMIREADIDGDGQVNYEVYTIYCV 231
L+ +E ++ D DG G++ E ++
Sbjct: 75 RDLSAKETKTLMAAGDKDGSGKIEVEEFSTLVA 107
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 14/102 (13%)
Query: 60 VYHGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL--- 116
+ + D +F M+ K K D ++++ F + DKD +GFI EL ++
Sbjct: 17 AFTAADSFDHKKFFQMVGLKKKSAD---DVKKVFHILDKDKSGFIEEDELGSILKGFSSD 73
Query: 117 GEKLTDEEVDEMIREADIDGDGQVNYEGNGTIDFPEFLTMMA 158
L+ +E ++ D DG G++ E EF T++A
Sbjct: 74 ARDLSAKETKTLMAAGDKDGSGKIEVE--------EFSTLVA 107
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 32/151 (21%)
Query: 93 FRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGTIDFPE 152
F DK NG +S + + + L D ++ E G+ QVN+ G
Sbjct: 35 FTSLDKGENGTLSREDFQRIPELAINPLGDRIINAFFSE----GEDQVNFRG-------- 82
Query: 153 FLTMMAR--------KMKDTDSEEEIRE-------AFRVFDKDGNGFISAAELRHVMTNL 197
F+ +A K KD + E + AFR++D D + IS EL V+ +
Sbjct: 83 FMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMM 142
Query: 198 -GEKLTDEEV----DEMIREADIDGDGQVNY 223
G ++DE++ D I+EAD DGD +++
Sbjct: 143 VGVNISDEQLGSIADRTIQEADQDGDSAISF 173
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 20/104 (19%)
Query: 59 FVYHGNGTIDFPEFLTMMAR--------KMKDTDSEEEIRE-------AFRVFDKDGNGF 103
F G ++F F+ +A K KD + E + AFR++D D +
Sbjct: 70 FFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDK 129
Query: 104 ISAAELRHVMTNL-GEKLTDEEV----DEMIREADIDGDGQVNY 142
IS EL V+ + G ++DE++ D I+EAD DGD +++
Sbjct: 130 ISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISF 173
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 32/151 (21%)
Query: 93 FRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGTIDFPE 152
F DK NG +S + + + L D ++ E G+ QVN+ G
Sbjct: 35 FTSLDKGENGTLSREDFQRIPELAINPLGDRIINAFFPE----GEDQVNFRG-------- 82
Query: 153 FLTMMAR--------KMKDTDSEEEIRE-------AFRVFDKDGNGFISAAELRHVMTNL 197
F+ +A K KD + E + AFR++D D + IS EL V+ +
Sbjct: 83 FMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDEKISRDELLQVLRMM 142
Query: 198 -GEKLTDEEV----DEMIREADIDGDGQVNY 223
G ++DE++ D I+EAD DGD +++
Sbjct: 143 VGVNISDEQLGSIADRTIQEADQDGDSAISF 173
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 20/104 (19%)
Query: 59 FVYHGNGTIDFPEFLTMMAR--------KMKDTDSEEEIRE-------AFRVFDKDGNGF 103
F G ++F F+ +A K KD + E + AFR++D D +
Sbjct: 70 FFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDEK 129
Query: 104 ISAAELRHVMTNL-GEKLTDEEV----DEMIREADIDGDGQVNY 142
IS EL V+ + G ++DE++ D I+EAD DGD +++
Sbjct: 130 ISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISF 173
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 12/102 (11%)
Query: 89 IREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGTI 148
I E F D + NG +S E+ V+ ++G K D ++ +++ DI+ G + Y
Sbjct: 41 INELFYKLDTNHNGSLSHREIYTVLASVGIKKWD--INRILQALDINDRGNITY------ 92
Query: 149 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAEL 190
EF+ R K+ +S ++ AF DKD +G+IS +++
Sbjct: 93 --TEFMAGCYR-WKNIESTF-LKAAFNKIDKDEDGYISKSDI 130
>pdb|3AKA|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 64/158 (40%), Gaps = 31/158 (19%)
Query: 86 EEEIREAFRVFDKDGNGFISAAELRHVMTNL------------GEKL---TDEEVDEMIR 130
E I F FD+DGNG I ++ L G+ L + +
Sbjct: 3 ERRIAARFTTFDQDGNGHIDRSDFSGAAKALLAEFGVAARSDRGQALYGGAEALWQGLAG 62
Query: 131 EADIDGDGQVNYEGNGTIDFPEFLTMMARKMKD-TDSEEEIREAF-----RVFDKDGNGF 184
AD DGD ++ E EF+T ++++D D EI F V D DG+G
Sbjct: 63 IADRDGDQRITRE--------EFVTGAVKRLRDKPDRFAEIARPFLHAALGVADTDGDGA 114
Query: 185 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 222
++ A+ +T G + ++ + D DGDG+V
Sbjct: 115 VTVADTARALTAFG--VPEDLARQAAAALDTDGDGKVG 150
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 11/77 (14%)
Query: 85 SEEEIREAFRVFDKDGNGFISAAELRHVMTNL---GEKLTDEEVDEMIREADIDGDGQVN 141
S +++++ F + DKD +GFI EL ++ L+ +E ++ D DGDG++
Sbjct: 3 SADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIG 62
Query: 142 YEGNGTIDFPEFLTMMA 158
E EF T++A
Sbjct: 63 VE--------EFSTLVA 71
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 166 SEEEIREAFRVFDKDGNGFISAAELRHVMTNL---GEKLTDEEVDEMIREADIDGDGQVN 222
S +++++ F + DKD +GFI EL ++ L+ +E ++ D DGDG++
Sbjct: 3 SADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIG 62
Query: 223 YEVYT 227
E ++
Sbjct: 63 VEEFS 67
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 11/74 (14%)
Query: 76 MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG--EKLTDEEVDE----MI 129
MA K+K E+ AF+ D +G+G+++A EL+ M L + L+ ++V E +I
Sbjct: 1 MACKVK-----AELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLI 55
Query: 130 READIDGDGQVNYE 143
+ AD + DG+++ E
Sbjct: 56 KMADKNSDGKISKE 69
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 11/74 (14%)
Query: 157 MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG--EKLTDEEVDE----MI 210
MA K+K E+ AF+ D +G+G+++A EL+ M L + L+ ++V E +I
Sbjct: 1 MACKVK-----AELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLI 55
Query: 211 READIDGDGQVNYE 224
+ AD + DG+++ E
Sbjct: 56 KMADKNSDGKISKE 69
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 64 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN-------- 115
NG I+F EF+ + E+++ AF+++D GFI EL+ ++
Sbjct: 88 NGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELV 147
Query: 116 LGEKLTDEEVDEMIREADIDGDGQVN 141
L E + + VD+ +AD DG+++
Sbjct: 148 LSEDMIEVMVDKAFVQADRKNDGKID 173
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 145 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN-------- 196
NG I+F EF+ + E+++ AF+++D GFI EL+ ++
Sbjct: 88 NGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELV 147
Query: 197 LGEKLTDEEVDEMIREADIDGDGQVN 222
L E + + VD+ +AD DG+++
Sbjct: 148 LSEDMIEVMVDKAFVQADRKNDGKID 173
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 64 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN-------- 115
NG I+F EF+ + E+++ AF+++D GFI EL+ ++
Sbjct: 88 NGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELV 147
Query: 116 LGEKLTDEEVDEMIREADIDGDGQVN 141
L E + + VD+ +AD DG+++
Sbjct: 148 LSEDMIEVMVDKAFVQADRKNDGKID 173
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 145 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN-------- 196
NG I+F EF+ + E+++ AF+++D GFI EL+ ++
Sbjct: 88 NGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELV 147
Query: 197 LGEKLTDEEVDEMIREADIDGDGQVN 222
L E + + VD+ +AD DG+++
Sbjct: 148 LSEDMIEVMVDKAFVQADRKNDGKID 173
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 166 SEEEIREAFRVFDKDGNGFISAAELRHVMTNL---GEKLTDEEVDEMIREADIDGDGQVN 222
S ++++ FR D D +G++ EL+ + +LT+ E ++ AD DGDG++
Sbjct: 40 SANQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIG 99
Query: 223 YEVY 226
E +
Sbjct: 100 AEEF 103
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 85 SEEEIREAFRVFDKDGNGFISAAELRHVMTNL---GEKLTDEEVDEMIREADIDGDGQVN 141
S ++++ FR D D +G++ EL+ + +LT+ E ++ AD DGDG++
Sbjct: 40 SANQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIG 99
Query: 142 YE 143
E
Sbjct: 100 AE 101
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 57 ELFVYHGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT-- 114
+LF NG + F EF ++ + +++I +F+++D GFI E++ ++
Sbjct: 92 DLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVAT 151
Query: 115 ------NLGEKLTDEEVDEMIREADIDGDGQVNYE 143
NL + + ++ +D+ EAD DG+++ E
Sbjct: 152 LAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKE 186
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 145 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT--------N 196
NG + F EF ++ + +++I +F+++D GFI E++ ++ N
Sbjct: 99 NGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMN 158
Query: 197 LGEKLTDEEVDEMIREADIDGDGQVNYEVY 226
L + + ++ +D+ EAD DG+++ E +
Sbjct: 159 LKDTVIEDIIDKTFEEADTKHDGKIDKEEW 188
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 146 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT-----NLGEK 200
G +DF EF+ + M++ E++++ F+++D DGNG I EL + N +
Sbjct: 72 GFVDFLEFIAAVNLIMQEK-MEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQT 130
Query: 201 LTDEE-VDEMIREADIDGDGQVNYE 224
L+ EE ++ + + DI+ DG++ E
Sbjct: 131 LSPEEFINLVFHKIDINNDGELTLE 155
Score = 34.3 bits (77), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 29/142 (20%), Positives = 66/142 (46%), Gaps = 5/142 (3%)
Query: 50 ESNLQYAELFVYHGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAEL 109
E+++ Y + + +G EF T++ + + + + I + + FD + +GF+ E
Sbjct: 20 ETHVWYRTFMMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEF 79
Query: 110 RHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEE 169
+ + ++ ++++ + D DG+G + + N +D F+ + A + T S EE
Sbjct: 80 IAAVNLIMQEKMEQKLKWYFKLYDADGNGSI--DKNELLDM--FMAVQALNGQQTLSPEE 135
Query: 170 -IREAFRVFDKDGNGFISAAEL 190
I F D + +G ++ E
Sbjct: 136 FINLVFHKIDINNDGELTLEEF 157
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 13/70 (18%), Positives = 35/70 (50%)
Query: 152 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIR 211
EF T++ + + + + I + + FD + +GF+ E + + ++ ++++ +
Sbjct: 41 EFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFK 100
Query: 212 EADIDGDGQV 221
D DG+G +
Sbjct: 101 LYDADGNGSI 110
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 85 SEEEIREAFRVFDKDGNGFISAAELRHVMTNL---GEKLTDEEVDEMIREADIDGDGQV 140
S ++++ FR D D +G++ EL++ + +LT+ E ++ AD DGDG++
Sbjct: 39 SASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKI 97
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 166 SEEEIREAFRVFDKDGNGFISAAELRHVMTNL---GEKLTDEEVDEMIREADIDGDGQV 221
S ++++ FR D D +G++ EL++ + +LT+ E ++ AD DGDG++
Sbjct: 39 SASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKI 97
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 57 ELFVYHGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT-- 114
+LF NG + F EF ++ + +++I +F+++D GFI E++ ++
Sbjct: 61 DLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVAT 120
Query: 115 ------NLGEKLTDEEVDEMIREADIDGDGQVNYE 143
NL + + ++ +D+ EAD DG+++ E
Sbjct: 121 LAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKE 155
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 145 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT--------N 196
NG + F EF ++ + +++I +F+++D GFI E++ ++ N
Sbjct: 68 NGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMN 127
Query: 197 LGEKLTDEEVDEMIREADIDGDGQVNYEVY 226
L + + ++ +D+ EAD DG+++ E +
Sbjct: 128 LKDTVIEDIIDKTFEEADTKHDGKIDKEEW 157
>pdb|3AKB|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 15/150 (10%)
Query: 86 EEEIREAFRVFDKDGNGFISAAEL----RHVMTNLGEKLTDEEVDEMI--READIDG-DG 138
E I F FD+DGNG I ++ + ++ G + + EA G G
Sbjct: 3 ERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAG 62
Query: 139 QVNYEGNGTIDFPEFLTMMARKMKDTD------SEEEIREAFRVFDKDGNGFISAAELRH 192
+ +G+ I EF+T ++++D + + A V D DG+G ++ A+
Sbjct: 63 IADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTAR 122
Query: 193 VMTNLGEKLTDEEVDEMIREADIDGDGQVN 222
+T G + ++ + D DGDG+V
Sbjct: 123 ALTAFG--VPEDLARQAAAALDTDGDGKVG 150
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 13/125 (10%)
Query: 85 SEEEIREAFRVFDKD-GNGFISAAELRHVMTNLGEKLTDEEV--DEMIREADIDGDGQVN 141
SEEE+ ++ F KD G I+ + + + TD + + R D + DG
Sbjct: 31 SEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPD-TDPKAYAQHVFRSFDSNLDG--- 86
Query: 142 YEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKL 201
T+DF E++ + + +++ AF ++D DGNG IS E+ ++ + + +
Sbjct: 87 -----TLDFKEYVIAL-HXTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVXAIFKXI 140
Query: 202 TDEEV 206
T E+V
Sbjct: 141 TPEDV 145
Score = 35.0 bits (79), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 32 TEAELQDMINEVDADENVESNLQYA-ELFVYHGNGTIDFPEFLTMMARKMKDTDSEEEIR 90
T+ + Q + + D + ++ Q+ F + +GT+DF E++ + + +++
Sbjct: 52 TQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIAL-HXTTAGKTNQKLE 110
Query: 91 EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 125
AF ++D DGNG IS E+ ++ + + +T E+V
Sbjct: 111 WAFSLYDVDGNGTISKNEVLEIVXAIFKXITPEDV 145
Score = 31.6 bits (70), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 37/77 (48%)
Query: 65 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 124
G I +F ++ A+ DTD + + FR FD + +G + E + T+++
Sbjct: 49 GRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHXTTAGKTNQK 108
Query: 125 VDEMIREADIDGDGQVN 141
++ D+DG+G ++
Sbjct: 109 LEWAFSLYDVDGNGTIS 125
>pdb|2D58|A Chain A, Human Microglia-Specific Protein Iba1
Length = 107
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
Query: 87 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNG 146
E +E + FD +GNG I L+ ++ LG T E+ ++I G+V+
Sbjct: 32 EGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLI--------GEVSSGSGE 83
Query: 147 TIDFPEFLTMMARK 160
T +P+FL MM K
Sbjct: 84 TFSYPDFLRMMLGK 97
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 20/146 (13%)
Query: 93 FRVFDKDGNGFISAAELRH-----VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGT 147
F D +GNG I+ E+ + NLG + + EA G G E
Sbjct: 26 FDYLDINGNGQITLDEIVSKASDDICKNLGATPAQTQRHQDCVEAFFRGCG---LEYGKE 82
Query: 148 IDFPEFLTMMARKMKDTDSEEEIRE-----------AFRVFDKDGNGFISAAELRHVMTN 196
FPEFL + + + D + R F +FDKDG+G I+ E +
Sbjct: 83 TKFPEFLEGW-KNLANADLAKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGRI 141
Query: 197 LGEKLTDEEVDEMIREADIDGDGQVN 222
G ++E+ ++ + D+D G+++
Sbjct: 142 SGISPSEEDCEKTFQHCDLDNSGELD 167
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
Query: 1 MIEEYGSLL------DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADENVE 50
+I E+G + DG GTIT E R G +P+E + + D D + E
Sbjct: 110 LIREWGDAVFDIFDKDGSGTITLDEWKAYGRISGISPSEEDCEKTFQHCDLDNSGE 165
>pdb|2G2B|A Chain A, Nmr Structure Of The Human Allograft Inflammatory Factor 1
Length = 150
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
Query: 87 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNG 146
E +E + FD +GNG I L+ ++ LG T E+ ++I G+V+
Sbjct: 51 EGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLI--------GEVSSGSGE 102
Query: 147 TIDFPEFLTMMARK 160
T +P+FL MM K
Sbjct: 103 TFSYPDFLRMMLGK 116
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 64/148 (43%), Gaps = 18/148 (12%)
Query: 90 REAFRVFDKDGNGFISAAEL-RHVMTNLGEKL--TDEEVD--EMIREADIDGDGQVNYEG 144
+ F D +GNG I+ E+ ++ KL T E+ ++ EA G G E
Sbjct: 23 KHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGM---EY 79
Query: 145 NGTIDFPEFL----TMMARKMKDTDSEEE--IRE----AFRVFDKDGNGFISAAELRHVM 194
I FP+FL + ++K E IRE F +FDKDG+G I+ E +
Sbjct: 80 GKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYG 139
Query: 195 TNLGEKLTDEEVDEMIREADIDGDGQVN 222
G + E+ + R D+D G ++
Sbjct: 140 KISGISPSQEDCEATFRHCDLDNSGDLD 167
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 64/148 (43%), Gaps = 18/148 (12%)
Query: 90 REAFRVFDKDGNGFISAAEL-RHVMTNLGEKL--TDEEVD--EMIREADIDGDGQVNYEG 144
+ F D +GNG I+ E+ ++ KL T E+ ++ EA G G E
Sbjct: 23 KHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGM---EY 79
Query: 145 NGTIDFPEFL----TMMARKMKDTDSEEE--IRE----AFRVFDKDGNGFISAAELRHVM 194
I FP+FL + ++K E IRE F +FDKDG+G I+ E +
Sbjct: 80 GKEIAFPQFLDGFKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYG 139
Query: 195 TNLGEKLTDEEVDEMIREADIDGDGQVN 222
G + E+ + R D+D G ++
Sbjct: 140 KISGISPSQEDCEATFRHCDLDNSGDLD 167
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 64/148 (43%), Gaps = 18/148 (12%)
Query: 90 REAFRVFDKDGNGFISAAEL-RHVMTNLGEKL--TDEEVD--EMIREADIDGDGQVNYEG 144
+ F D +GNG I+ E+ ++ KL T E+ ++ EA G G E
Sbjct: 23 KHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGM---EY 79
Query: 145 NGTIDFPEFL----TMMARKMKDTDSEEE--IRE----AFRVFDKDGNGFISAAELRHVM 194
I FP+FL + ++K E IRE F +FDKDG+G I+ E +
Sbjct: 80 GKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYG 139
Query: 195 TNLGEKLTDEEVDEMIREADIDGDGQVN 222
G + E+ + R D+D G ++
Sbjct: 140 KISGISPSQEDCEATFRHCDLDNSGDLD 167
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 35.0 bits (79), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 66/148 (44%), Gaps = 26/148 (17%)
Query: 9 LDGDGTITTKELGT-----VMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHG 63
++G+G IT E+ + + LG P + + E VE+ + ++ + +G
Sbjct: 34 INGNGKITLDEIVSKASDDICAKLGATPAQTQRHQ--------EAVEA--FFKKIGLDYG 83
Query: 64 NGTIDFPEF------LTMMARKMKDTDSEEEIRE----AFRVFDKDGNGFISAAELRHVM 113
++FP F L K+ + + IR F +FDKDG+G IS E +
Sbjct: 84 K-EVEFPAFVNGWKELAKHDLKLWSQNKKSLIRNWGEAVFDIFDKDGSGSISLDEWKTYG 142
Query: 114 TNLGEKLTDEEVDEMIREADIDGDGQVN 141
G +DE+ ++ + D+D G+++
Sbjct: 143 GISGICPSDEDAEKTFKHCDLDNSGKLD 170
Score = 34.3 bits (77), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 10/85 (11%)
Query: 148 IDFPEF------LTMMARKMKDTDSEEEIRE----AFRVFDKDGNGFISAAELRHVMTNL 197
++FP F L K+ + + IR F +FDKDG+G IS E +
Sbjct: 86 VEFPAFVNGWKELAKHDLKLWSQNKKSLIRNWGEAVFDIFDKDGSGSISLDEWKTYGGIS 145
Query: 198 GEKLTDEEVDEMIREADIDGDGQVN 222
G +DE+ ++ + D+D G+++
Sbjct: 146 GICPSDEDAEKTFKHCDLDNSGKLD 170
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 34.7 bits (78), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 64/148 (43%), Gaps = 18/148 (12%)
Query: 90 REAFRVFDKDGNGFISAAEL-RHVMTNLGEKL--TDEEVD--EMIREADIDGDGQVNYEG 144
+ F D +GNG I+ E+ ++ KL T E+ ++ EA G G E
Sbjct: 23 KHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGM---EY 79
Query: 145 NGTIDFPEFL----TMMARKMKDTDSEEE--IRE----AFRVFDKDGNGFISAAELRHVM 194
I FP+FL + ++K E IRE F +FDKDG+G I+ E +
Sbjct: 80 GKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYG 139
Query: 195 TNLGEKLTDEEVDEMIREADIDGDGQVN 222
G + E+ + R D+D G ++
Sbjct: 140 KISGISPSQEDCEATFRHCDLDNAGDLD 167
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 34.3 bits (77), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 64/148 (43%), Gaps = 18/148 (12%)
Query: 90 REAFRVFDKDGNGFISAAEL-RHVMTNLGEKL--TDEEVD--EMIREADIDGDGQVNYEG 144
+ F D +GNG I+ E+ ++ KL T E+ ++ EA G G E
Sbjct: 23 KHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGM---EY 79
Query: 145 NGTIDFPEFL----TMMARKMKDTDSEEE--IRE----AFRVFDKDGNGFISAAELRHVM 194
I FP+FL + ++K E IRE F +FDKDG+G I+ E +
Sbjct: 80 GKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYG 139
Query: 195 TNLGEKLTDEEVDEMIREADIDGDGQVN 222
G + E+ + R D+D G ++
Sbjct: 140 KISGISPSQEDCEATFRHCDLDDSGDLD 167
>pdb|1SL8|A Chain A, Calcium-Loaded Apo-Aequorin From Aequorea Victoria
Length = 191
Score = 34.3 bits (77), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 67/166 (40%), Gaps = 21/166 (12%)
Query: 75 MMARKMKDTDSEEEI---REAFRVFDKDGNGFISAAELRH-----VMTNLGEKLTDEEVD 126
M + D D+ + I + F D + NG IS E+ + V+ NLG +
Sbjct: 1 MSVKLTPDFDNPKWIGRHKHMFNFLDVNHNGRISLDEMVYKASDIVINNLGATPEQAKRH 60
Query: 127 EMIREADIDGDGQVNYEGNGTIDFPEFLTMMAR------KMKDTDSEEEIR----EAFRV 176
+ EA G G + ++PE++ R K + IR F +
Sbjct: 61 KDAVEAFFGGAGM---KYGVETEWPEYIEGWKRLASEELKRYSKNQITLIRLWGDALFDI 117
Query: 177 FDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 222
DKD NG IS E + + G + E+ +E R DID GQ++
Sbjct: 118 IDKDQNGAISLDEWKAYTKSAGIIQSSEDCEETFRVCDIDESGQLD 163
>pdb|1PON|A Chain A, Site Iii-Site Iv Troponin C Heterodimer, Nmr
pdb|1CTA|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTA|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
Length = 36
Score = 34.3 bits (77), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 85 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLG 117
SEEE+ AFR+FDK+ +G+I EL ++ G
Sbjct: 3 SEEELANAFRIFDKNADGYIDIEELGEILRATG 35
Score = 34.3 bits (77), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 166 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLG 198
SEEE+ AFR+FDK+ +G+I EL ++ G
Sbjct: 3 SEEELANAFRIFDKNADGYIDIEELGEILRATG 35
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 33.9 bits (76), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 71/162 (43%), Gaps = 4/162 (2%)
Query: 32 TEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPEFLTMMARKMKDTDSEEEIRE 91
++ +LQD++ D+ E Y F +G ++ EF + + D
Sbjct: 9 SQDQLQDLVRSTRFDKK-ELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEY 67
Query: 92 AFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGTI--D 149
F VFD D NG+I E ++ ++++ + D+D +G ++Y+ I
Sbjct: 68 VFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDA 127
Query: 150 FPEFLTMMARKMKDTDSEEE-IREAFRVFDKDGNGFISAAEL 190
+ + M + +D D+ E+ + + F + DK+ +G ++ E
Sbjct: 128 IYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEF 169
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 13/95 (13%)
Query: 145 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGE----- 199
NG IDF EF+ ++ + +++ I AF+++D D NG IS E+ ++ + +
Sbjct: 77 NGYIDFKEFICALSVTSRGELNDKLIW-AFQLYDLDNNGLISYDEMLRIVDAIYKMVGSM 135
Query: 200 -KLTDEE------VDEMIREADIDGDGQVNYEVYT 227
KL ++E V+++ D + DGQ+ E +
Sbjct: 136 VKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFC 170
>pdb|1F4O|A Chain A, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4O|B Chain B, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4Q|A Chain A, Crystal Structure Of Apo Grancalcin
pdb|1F4Q|B Chain B, Crystal Structure Of Apo Grancalcin
Length = 165
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 58/142 (40%), Gaps = 22/142 (15%)
Query: 101 NGFISAAELRHVMTNLG-----EKLTDEEVDEMIREADIDGDGQVNYEGNGTIDFPEFLT 155
+G + A EL+ +T G + E MI D D G++ + F E
Sbjct: 13 DGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNA-----FKELWA 67
Query: 156 MMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADI 215
+ +E F D+DG+G + ELR + +G +L+ + + +++
Sbjct: 68 AL----------NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKR--Y 115
Query: 216 DGDGQVNYEVYTIYCVHIMGNT 237
+G++ ++ Y CV + T
Sbjct: 116 SKNGRIFFDDYVACCVKLRALT 137
Score = 31.6 bits (70), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 10/76 (13%)
Query: 90 REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGTID 149
+E F D+DG+G + ELR + +G +L+ + + +++ Y NG I
Sbjct: 73 KENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKR----------YSKNGRIF 122
Query: 150 FPEFLTMMARKMKDTD 165
F +++ + TD
Sbjct: 123 FDDYVACCVKLRALTD 138
>pdb|1K95|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|B Chain B, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
Length = 165
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 58/142 (40%), Gaps = 22/142 (15%)
Query: 101 NGFISAAELRHVMTNLG-----EKLTDEEVDEMIREADIDGDGQVNYEGNGTIDFPEFLT 155
+G + A EL+ +T G + E MI D D G++ + F E
Sbjct: 13 DGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNA-----FKELWA 67
Query: 156 MMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADI 215
+ +E F D+DG+G + ELR + +G +L+ + + +++
Sbjct: 68 AL----------NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKR--Y 115
Query: 216 DGDGQVNYEVYTIYCVHIMGNT 237
+G++ ++ Y CV + T
Sbjct: 116 SKNGRIFFDDYVACCVKLRALT 137
Score = 31.6 bits (70), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 10/76 (13%)
Query: 90 REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGTID 149
+E F D+DG+G + ELR + +G +L+ + + +++ Y NG I
Sbjct: 73 KENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKR----------YSKNGRIF 122
Query: 150 FPEFLTMMARKMKDTD 165
F +++ + TD
Sbjct: 123 FDDYVACCVKLRALTD 138
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 63 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL-GE--- 118
++ F +FL +++ + + AFR+FD D +G ++ +L ++ L GE
Sbjct: 74 AKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGED 133
Query: 119 -KLTDEE----VDEMIREADIDGDGQVN 141
+L+ E +D ++ E+DID DG +N
Sbjct: 134 TRLSASEMKQLIDNILEESDIDRDGTIN 161
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 144 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL-GE--- 199
++ F +FL +++ + + AFR+FD D +G ++ +L ++ L GE
Sbjct: 74 AKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGED 133
Query: 200 -KLTDEE----VDEMIREADIDGDGQVN 222
+L+ E +D ++ E+DID DG +N
Sbjct: 134 TRLSASEMKQLIDNILEESDIDRDGTIN 161
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 63 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL-GE--- 118
++ F +FL +++ + + AFR+FD D +G ++ +L ++ L GE
Sbjct: 105 AKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGED 164
Query: 119 -KLTDEE----VDEMIREADIDGDGQVN 141
+L+ E +D ++ E+DID DG +N
Sbjct: 165 TRLSASEMKQLIDNILEESDIDRDGTIN 192
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 144 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL-GE--- 199
++ F +FL +++ + + AFR+FD D +G ++ +L ++ L GE
Sbjct: 105 AKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGED 164
Query: 200 -KLTDEE----VDEMIREADIDGDGQVN 222
+L+ E +D ++ E+DID DG +N
Sbjct: 165 TRLSASEMKQLIDNILEESDIDRDGTIN 192
>pdb|1WLZ|A Chain A, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
pdb|1WLZ|B Chain B, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
pdb|1WLZ|C Chain C, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
pdb|1WLZ|D Chain D, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
Length = 105
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 75 MMARKMKDTDSE-EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 133
++AR K S I + F FD IS E R + + LTDE+ D + E
Sbjct: 11 ILARLHKAVTSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMP 70
Query: 134 IDGDGQVNYEGNGTIDFPEFLT 155
++ G++ Y P+FL+
Sbjct: 71 VNAKGRLKY--------PDFLS 84
Score = 31.6 bits (70), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 156 MMARKMKDTDSE-EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 214
++AR K S I + F FD IS E R + + LTDE+ D + E
Sbjct: 11 ILARLHKAVTSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMP 70
Query: 215 IDGDGQVNY 223
++ G++ Y
Sbjct: 71 VNAKGRLKY 79
>pdb|1WY9|A Chain A, Crystal Structure Of Microglia-Specific Protein, Iba1
Length = 147
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 12/71 (16%)
Query: 91 EAFRV----FDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNG 146
EAF+V FD +GNG I L+ ++ LG T E+ +IRE V+
Sbjct: 48 EAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIRE--------VSSGSEE 99
Query: 147 TIDFPEFLTMM 157
T + +FL MM
Sbjct: 100 TFSYSDFLRMM 110
Score = 30.8 bits (68), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 172 EAFRV----FDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 223
EAF+V FD +GNG I L+ ++ LG T E+ +IRE + +Y
Sbjct: 48 EAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSY 103
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 64 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGE----- 118
+G I+F EF+ ++ + T +E++R AF+++D D +G+I+ E+ ++ + +
Sbjct: 77 DGRIEFSEFIQALSVTSRGT-LDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNT 135
Query: 119 -KLTDEE------VDEMIREADIDGDGQVNYE 143
+L +EE VD + D + DG++ +
Sbjct: 136 VELPEEENTPEKRVDRIFAMMDKNADGKLTLQ 167
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 145 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGE----- 199
+G I+F EF+ ++ + T +E++R AF+++D D +G+I+ E+ ++ + +
Sbjct: 77 DGRIEFSEFIQALSVTSRGT-LDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNT 135
Query: 200 -KLTDEE------VDEMIREADIDGDGQVNYE 224
+L +EE VD + D + DG++ +
Sbjct: 136 VELPEEENTPEKRVDRIFAMMDKNADGKLTLQ 167
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
Query: 113 MTNLGEKLTDEEVDEMIREADI-DGDGQVNYEG------NGTIDFPEFLTMMARKMKDTD 165
M KL E V+E+ R+ + + Q Y+G +G +D F + + D
Sbjct: 1 MGKSNSKLKPEVVEELTRKTYFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGD 60
Query: 166 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 221
+ F VFD++ +G I +E ++ DE++ + D+D DG +
Sbjct: 61 PTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYI 116
Score = 28.1 bits (61), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 48/112 (42%), Gaps = 21/112 (18%)
Query: 92 AFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN---------- 141
F VFD++ +G I +E ++ DE++ + D+D DG +
Sbjct: 68 VFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDA 127
Query: 142 -YEGNG-TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELR 191
Y+ G T++ PE ++ E+ + F + DK+ +G ++ E +
Sbjct: 128 IYQMVGNTVELPE---------EENTPEKRVDRIFAMMDKNADGKLTLQEFQ 170
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 31.6 bits (70), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 14/147 (9%)
Query: 50 ESNLQYAELFVYHGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAEL 109
E + Y + +G + EF K + + + + F FD + +G+I E
Sbjct: 15 ECHQWYKKFMTECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEY 74
Query: 110 RHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGNGTIDFPEFLTMM-ARKMKDTDSEE 168
++ + + D+++ + D+D GNG ID E L ++ A + + +E
Sbjct: 75 VAALSLVLKGKVDQKLRWYFKLYDVD--------GNGCIDRGELLNIIKAIRAINRCNEA 126
Query: 169 EIREAFR--VFDK---DGNGFISAAEL 190
E F VFDK +G+G +S E
Sbjct: 127 MTAEEFTNMVFDKIDINGDGELSLEEF 153
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/78 (19%), Positives = 36/78 (46%)
Query: 145 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 204
+G + EF K + + + + F FD + +G+I E ++ + + D+
Sbjct: 29 SGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQ 88
Query: 205 EVDEMIREADIDGDGQVN 222
++ + D+DG+G ++
Sbjct: 89 KLRWYFKLYDVDGNGCID 106
>pdb|1EJ3|A Chain A, Crystal Structure Of Aequorin
pdb|1EJ3|B Chain B, Crystal Structure Of Aequorin
pdb|1UHI|A Chain A, Crystal Structure Of I-aequorin
pdb|1UHI|B Chain B, Crystal Structure Of I-aequorin
pdb|1UHK|A Chain A, Crystal Structure Of N-Aequorin
pdb|1UHK|B Chain B, Crystal Structure Of N-Aequorin
Length = 191
Score = 31.2 bits (69), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 174 FRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 222
F + DKD NG I+ E + G + E+ +E R DID GQ++
Sbjct: 115 FDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLD 163
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 31.2 bits (69), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 64 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAE--LRHVMTNLGEKLT 121
+G I EF T+ ++ + D + + FR FD + +G + E + MT+ G+ T
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGK--T 97
Query: 122 DEEVDEMIREADIDGDGQVN 141
+++++ D+DG+G ++
Sbjct: 98 NQKLEWAFSLYDVDGNGTIS 117
Score = 31.2 bits (69), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 145 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAE--LRHVMTNLGEKLT 202
+G I EF T+ ++ + D + + FR FD + +G + E + MT+ G+ T
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGK--T 97
Query: 203 DEEVDEMIREADIDGDGQVN 222
+++++ D+DG+G ++
Sbjct: 98 NQKLEWAFSLYDVDGNGTIS 117
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 31.2 bits (69), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 64 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAE--LRHVMTNLGEKLT 121
+G I EF T+ ++ + D + + FR FD + +G + E + MT+ G+ T
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGK--T 97
Query: 122 DEEVDEMIREADIDGDGQVN 141
+++++ D+DG+G ++
Sbjct: 98 NQKLEWAFSLYDVDGNGTIS 117
Score = 31.2 bits (69), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 145 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAE--LRHVMTNLGEKLT 202
+G I EF T+ ++ + D + + FR FD + +G + E + MT+ G+ T
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGK--T 97
Query: 203 DEEVDEMIREADIDGDGQVN 222
+++++ D+DG+G ++
Sbjct: 98 NQKLEWAFSLYDVDGNGTIS 117
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 31.2 bits (69), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 64 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAE--LRHVMTNLGEKLT 121
+G I EF T+ ++ + D + + FR FD + +G + E + MT+ G+ T
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGK--T 97
Query: 122 DEEVDEMIREADIDGDGQVN 141
+++++ D+DG+G ++
Sbjct: 98 NQKLEWAFSLYDVDGNGTIS 117
Score = 31.2 bits (69), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 145 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAE--LRHVMTNLGEKLT 202
+G I EF T+ ++ + D + + FR FD + +G + E + MT+ G+ T
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGK--T 97
Query: 203 DEEVDEMIREADIDGDGQVN 222
+++++ D+DG+G ++
Sbjct: 98 NQKLEWAFSLYDVDGNGTIS 117
>pdb|1UHH|A Chain A, Crystal Structure Of Cp-Aequorin
pdb|1UHH|B Chain B, Crystal Structure Of Cp-Aequorin
pdb|1UHJ|A Chain A, Crystal Structure Of Br-Aequorin
pdb|1UHJ|B Chain B, Crystal Structure Of Br-Aequorin
Length = 191
Score = 31.2 bits (69), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 93 FRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 141
F + DKD NG I+ E + G + E+ +E R DID GQ++
Sbjct: 115 FDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLD 163
Score = 31.2 bits (69), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 174 FRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 222
F + DKD NG I+ E + G + E+ +E R DID GQ++
Sbjct: 115 FDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLD 163
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 31.2 bits (69), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 64 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAE--LRHVMTNLGEKLT 121
+G I EF T+ ++ + D + + FR FD + +G + E + MT+ G+ T
Sbjct: 41 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGK--T 98
Query: 122 DEEVDEMIREADIDGDGQVN 141
+++++ D+DG+G ++
Sbjct: 99 NQKLEWAFSLYDVDGNGTIS 118
Score = 31.2 bits (69), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 145 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAE--LRHVMTNLGEKLT 202
+G I EF T+ ++ + D + + FR FD + +G + E + MT+ G+ T
Sbjct: 41 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGK--T 98
Query: 203 DEEVDEMIREADIDGDGQVN 222
+++++ D+DG+G ++
Sbjct: 99 NQKLEWAFSLYDVDGNGTIS 118
>pdb|2LVV|A Chain A, Nmr Structure Of Tb24
Length = 226
Score = 31.2 bits (69), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 10/157 (6%)
Query: 81 KDTDSEEEIREAFRVFDKDGNGFISAAEL---RHVMTNLGEKLTDEEVDEMIREADIDGD 137
KD +S+ E F+ FD +G G + E+ + + L E T D + R D D
Sbjct: 45 KDAESKSRRIELFKQFDTNGTGKLGFREVLDGCYGILKLDE-FTTHLPDIVQRAFDKAKD 103
Query: 138 GQVNYEGNGTIDFPEFL--TMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT 195
+G G D EFL +M + D E+ F DKDG+ + E + +
Sbjct: 104 LGNKVKGVGEEDLVEFLEFRLMLCYIYDI---FELTVMFDTMDKDGSLLLELQEFKEALP 160
Query: 196 NLGEKLTD-EEVDEMIREADIDGDGQVNYEVYTIYCV 231
L E D + + E D +G G V ++ ++ + V
Sbjct: 161 KLKEWGVDITDATTVFNEIDTNGSGVVTFDEFSCWAV 197
>pdb|2FCD|A Chain A, Solution Structure Of N-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 78
Score = 31.2 bits (69), Expect = 0.56, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 11 GDGTITTKELGTVMRSLGQNPTEAELQDMIN 41
G G I LG +R++G NPT +QD+IN
Sbjct: 17 GQGAIAKDSLGDYLRAIGYNPTNQLVQDIIN 47
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 64 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAE--LRHVMTNLGEKLT 121
+G I EF T+ ++ + D + + FR FD + +G + + + MT+ G+ T
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKQYVIALHMTSAGK--T 97
Query: 122 DEEVDEMIREADIDGDGQVN 141
+++++ D+DG+G ++
Sbjct: 98 NQKLEWAFSLYDVDGNGTIS 117
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 145 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAE--LRHVMTNLGEKLT 202
+G I EF T+ ++ + D + + FR FD + +G + + + MT+ G+ T
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKQYVIALHMTSAGK--T 97
Query: 203 DEEVDEMIREADIDGDGQVN 222
+++++ D+DG+G ++
Sbjct: 98 NQKLEWAFSLYDVDGNGTIS 117
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 64 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAE--LRHVMTNLGEKLT 121
+G I EF T+ ++ + D + + FR FD + +G + + + MT+ G+ T
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKQYVIALHMTSAGK--T 97
Query: 122 DEEVDEMIREADIDGDGQVN 141
+++++ D+DG+G ++
Sbjct: 98 NQKLEWAFSLYDVDGNGTIS 117
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 145 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAE--LRHVMTNLGEKLT 202
+G I EF T+ ++ + D + + FR FD + +G + + + MT+ G+ T
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKQYVIALHMTSAGK--T 97
Query: 203 DEEVDEMIREADIDGDGQVN 222
+++++ D+DG+G ++
Sbjct: 98 NQKLEWAFSLYDVDGNGTIS 117
>pdb|1BOD|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 74
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 14/76 (18%)
Query: 166 SEEEIREAFRVFDKDGNG--------FISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 217
S EE++ F +DK+G+G + E ++ + +DE+ E D +G
Sbjct: 3 SPEELKGIFEKYDKEGDGQLSKEELKLLLQTEFPSLLKGMS------TLDELFEELDKNG 56
Query: 218 DGQVNYEVYTIYCVHI 233
DG+V++E + + I
Sbjct: 57 DGEVSFEEFQVLVKKI 72
Score = 27.7 bits (60), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 14/67 (20%)
Query: 85 SEEEIREAFRVFDKDGNG--------FISAAELRHVMTNLGEKLTDEEVDEMIREADIDG 136
S EE++ F +DK+G+G + E ++ + +DE+ E D +G
Sbjct: 3 SPEELKGIFEKYDKEGDGQLSKEELKLLLQTEFPSLLKGMS------TLDELFEELDKNG 56
Query: 137 DGQVNYE 143
DG+V++E
Sbjct: 57 DGEVSFE 63
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 9/56 (16%)
Query: 128 MIREADIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG 183
+ +E D++GDG V+YE + F++ K + +E+ ++ F+ D DGNG
Sbjct: 5 LFKEIDVNGDGAVSYE-----EVKAFVS----KKRAIKNEQLLQLIFKSIDADGNG 51
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/55 (21%), Positives = 28/55 (50%)
Query: 174 FRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
+ D D +G++S E + + +G LTD++ D + +GQ++ + + +
Sbjct: 108 YDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLV 162
>pdb|2HPS|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri
Length = 186
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/55 (21%), Positives = 28/55 (50%)
Query: 174 FRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVYTI 228
+ D D +G++S E + + +G LTD++ D + +GQ++ + + +
Sbjct: 108 YDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLV 162
>pdb|4E31|A Chain A, X-Ray Structure Of The Y76f Mutant Of Tcab9, A
C-3'-Methyltransferase, In Complex With
S-Adenosyl-L-Homocysteine And Sugar Product
Length = 416
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 38 DMINEVDADENVESNLQYAELFVYHGNGTIDFPEFLTMMARKMKDTD 84
D V E V +L + E+F YH +G+ E M+AR T+
Sbjct: 57 DSCEMVQLTEEVPRDLMFHEVFPYHSSGSSVMREHFAMLARDFLATE 103
>pdb|1LDK|B Chain B, Structure Of The Cul1-Rbx1-Skp1-F Boxskp2 Scf Ubiquitin
Ligase Complex
Length = 366
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/137 (19%), Positives = 61/137 (44%), Gaps = 15/137 (10%)
Query: 22 TVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPEFLTMMARKMK 81
++++ +NP EAEL+D +N+V +F Y + + + M+A+++
Sbjct: 18 SLLKKSSKNPEEAELEDTLNQVMV------------VFKYIEDKDVFQKFYAKMLAKRLV 65
Query: 82 DTDSEEEIREAFRVFD-KDGNGFISAAELRHVMTNLG--EKLTDEEVDEMIREADIDGDG 138
+S + EA + K GF ++L+ + ++G + L ++ + +D D
Sbjct: 66 HQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSEPLDLDF 125
Query: 139 QVNYEGNGTIDFPEFLT 155
+ +G+ F + T
Sbjct: 126 SIQVLSSGSWPFQQSCT 142
>pdb|1BJA|A Chain A, Activation Domain Of The Phage T4 Transcription Factor
Mota
pdb|1BJA|B Chain B, Activation Domain Of The Phage T4 Transcription Factor
Mota
Length = 95
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 73 LTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 132
+T + + D +E+ + KD FI+AAE+R V +LG + + + +I++
Sbjct: 3 VTYIIKASNDVLNEKTATILITIAKKD---FITAAEVREVHPDLGNAVVNSNIGVLIKKG 59
Query: 133 DID--GDGQV 140
++ GDG +
Sbjct: 60 LVEKSGDGLI 69
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 154 LTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 213
+T + + D +E+ + KD FI+AAE+R V +LG + + + +I++
Sbjct: 3 VTYIIKASNDVLNEKTATILITIAKKD---FITAAEVREVHPDLGNAVVNSNIGVLIKKG 59
Query: 214 DID--GDGQV 221
++ GDG +
Sbjct: 60 LVEKSGDGLI 69
>pdb|1I1S|A Chain A, Solution Structure Of The Transcriptional Activation
Domain Of The Bacteriophage T4 Protein Mota
Length = 96
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 73 LTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 132
+T + + D +E+ + KD FI+AAE+R V +LG + + + +I++
Sbjct: 4 VTYIIKASNDVLNEKTATILITIAKKD---FITAAEVREVHPDLGNAVVNSNIGVLIKKG 60
Query: 133 DID--GDGQV 140
++ GDG +
Sbjct: 61 LVEKSGDGLI 70
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 154 LTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 213
+T + + D +E+ + KD FI+AAE+R V +LG + + + +I++
Sbjct: 4 VTYIIKASNDVLNEKTATILITIAKKD---FITAAEVREVHPDLGNAVVNSNIGVLIKKG 60
Query: 214 DID--GDGQV 221
++ GDG +
Sbjct: 61 LVEKSGDGLI 70
>pdb|1QLS|A Chain A, S100c (S100a11),Or Calgizzarin, In Complex With Annexin I
N-Terminus
Length = 99
Score = 28.1 bits (61), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 18/87 (20%)
Query: 81 KDTDSEEEIREAFRVFDK----DGNGF-ISAAELRHVMTNLGEKLTDEE-----VDEMIR 130
+ T++E I +F K DGN IS E M T + +D M++
Sbjct: 4 RPTETERCIESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMK 63
Query: 131 EADIDGDGQVNYEGNGTIDFPEFLTMM 157
+ D+D DGQ +DF EFL ++
Sbjct: 64 KLDLDSDGQ--------LDFQEFLNLI 82
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 11/66 (16%)
Query: 125 VDEMIREADIDGDGQVNYEGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGF 184
V ++ D + DGQ+N + +F +LT + S+ E EAF D +GNG
Sbjct: 104 VKGIVGMCDKNADGQINAD-----EFAAWLTALGM------SKAEAAEAFNQVDTNGNGE 152
Query: 185 ISAAEL 190
+S EL
Sbjct: 153 LSLDEL 158
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 9/71 (12%)
Query: 83 TDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 142
+D + ++ +++ D DG+G ++ E+ T+ +K E+V E + +AD +GDG +
Sbjct: 1 SDDKIGLKVLYKLMDVDGDGKLTKEEV----TSFFKKHGIEKVAEQVMKADANGDGYITL 56
Query: 143 EGNGTIDFPEF 153
E +F EF
Sbjct: 57 E-----EFLEF 62
Score = 27.7 bits (60), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 164 TDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 223
+D + ++ +++ D DG+G ++ E+ T+ +K E+V E + +AD +GDG +
Sbjct: 1 SDDKIGLKVLYKLMDVDGDGKLTKEEV----TSFFKKHGIEKVAEQVMKADANGDGYITL 56
Query: 224 E 224
E
Sbjct: 57 E 57
>pdb|1U6G|A Chain A, Crystal Structure Of The Cand1-Cul1-Roc1 Complex
Length = 776
Score = 27.7 bits (60), Expect = 5.5, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 61/137 (44%), Gaps = 15/137 (10%)
Query: 22 TVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPEFLTMMARKMK 81
++++ +NP EAEL+D +N+V +F Y + + + M+A+++
Sbjct: 428 SLLKKSSKNPEEAELEDTLNQVMV------------VFKYIEDKDVFQKFYAKMLAKRLV 475
Query: 82 DTDSEEEIREAFRVFD-KDGNGFISAAELRHVMTNLG--EKLTDEEVDEMIREADIDGDG 138
+S + EA + K GF ++L+ + ++G + L ++ + +D D
Sbjct: 476 HQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSEPLDLDF 535
Query: 139 QVNYEGNGTIDFPEFLT 155
+ +G+ F + T
Sbjct: 536 SIQVLSSGSWPFQQSCT 552
>pdb|2JPT|A Chain A, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
pdb|2JPT|B Chain B, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
Length = 93
Score = 27.7 bits (60), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 19/23 (82%)
Query: 206 VDEMIREADIDGDGQVNYEVYTI 228
VD++++E D DGDG+V+++ Y +
Sbjct: 54 VDKVMKELDEDGDGEVDFQEYVV 76
>pdb|4E2X|A Chain A, X-Ray Structure Of The Y222f Mutant Of Tcab9, A C-3'-
Methyltransferase, In Complex With
S-Adenosyl-L-Homocysteine And Dtdp
Length = 416
Score = 27.7 bits (60), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 38 DMINEVDADENVESNLQYAELFVYHGNGTIDFPEFLTMMARKMKDTD 84
D V E V +L + E++ YH +G+ E M+AR T+
Sbjct: 57 DSCEMVQLTEEVPRDLMFHEVYPYHSSGSSVMREHFAMLARDFLATE 103
>pdb|3NDI|A Chain A, X-Ray Structure Of A C-3'-Methyltransferase In Complex
With S- Adenosylmethionine And Dtmp
pdb|3NDJ|A Chain A, X-Ray Structure Of A C-3'-Methyltransferase In Complex
With S- Adenosyl-L-Homocysteine And Sugar Product
pdb|4E32|A Chain A, X-Ray Structure Of The C-3'-Methyltransferase Tcab9 In
Complex With S- Adenosyl-L-Homocysteine And Dtdp-Sugar
Substrate
pdb|4E33|A Chain A, X-Ray Structure Of The C-3'-Methyltransferase Tcab9 In
Complex With S- Adenosyl-L-Homocysteine And Reduced
Dtdp-Sugar Substrate
Length = 416
Score = 27.7 bits (60), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 38 DMINEVDADENVESNLQYAELFVYHGNGTIDFPEFLTMMARKMKDTD 84
D V E V +L + E++ YH +G+ E M+AR T+
Sbjct: 57 DSCEMVQLTEEVPRDLMFHEVYPYHSSGSSVMREHFAMLARDFLATE 103
>pdb|1LDJ|A Chain A, Structure Of The Cul1-rbx1-skp1-f Boxskp2 Scf Ubiquitin
Ligase Complex
Length = 760
Score = 27.7 bits (60), Expect = 5.8, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 61/137 (44%), Gaps = 15/137 (10%)
Query: 22 TVMRSLGQNPTEAELQDMINEVDADENVESNLQYAELFVYHGNGTIDFPEFLTMMARKMK 81
++++ +NP EAEL+D +N+V +F Y + + + M+A+++
Sbjct: 412 SLLKKSSKNPEEAELEDTLNQVMV------------VFKYIEDKDVFQKFYAKMLAKRLV 459
Query: 82 DTDSEEEIREAFRVFD-KDGNGFISAAELRHVMTNLG--EKLTDEEVDEMIREADIDGDG 138
+S + EA + K GF ++L+ + ++G + L ++ + +D D
Sbjct: 460 HQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSEPLDLDF 519
Query: 139 QVNYEGNGTIDFPEFLT 155
+ +G+ F + T
Sbjct: 520 SIQVLSSGSWPFQQSCT 536
>pdb|4E30|A Chain A, X-Ray Structure Of The H181nE224Q DOUBLE MUTANT OF TCAB9,
A C-3'- Methyltransferase, In Complex With
S-Adenosyl-L-Homocysteine And Dtdp
Length = 416
Score = 27.7 bits (60), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 38 DMINEVDADENVESNLQYAELFVYHGNGTIDFPEFLTMMARKMKDTD 84
D V E V +L + E++ YH +G+ E M+AR T+
Sbjct: 57 DSCEMVQLTEEVPRDLMFHEVYPYHSSGSSVMREHFAMLARDFLATE 103
>pdb|4E2Z|A Chain A, X-Ray Structure Of The H225n Mutant Of Tcab9, A C-3'-
Methyltransferase, In Complex With
S-Adenosyl-L-Homocysteine And Sugar Product
Length = 416
Score = 27.7 bits (60), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 38 DMINEVDADENVESNLQYAELFVYHGNGTIDFPEFLTMMARKMKDTD 84
D V E V +L + E++ YH +G+ E M+AR T+
Sbjct: 57 DSCEMVQLTEEVPRDLMFHEVYPYHSSGSSVMREHFAMLARDFLATE 103
>pdb|4E2Y|A Chain A, X-Ray Structure Of The E224q Mutant Of Tcab9, A C-3'-
Methyltransferase, In Complex With
S-Adenosyl-L-Homocysteine And Sugar Product
Length = 416
Score = 27.7 bits (60), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 38 DMINEVDADENVESNLQYAELFVYHGNGTIDFPEFLTMMARKMKDTD 84
D V E V +L + E++ YH +G+ E M+AR T+
Sbjct: 57 DSCEMVQLTEEVPRDLMFHEVYPYHSSGSSVMREHFAMLARDFLATE 103
>pdb|4E2W|A Chain A, X-Ray Structure Of The H181n Mutant Of Tcab9, A C-3'-
Methyltransferase, In Complex With
S-Adenosyl-L-Homocysteine And Sugar Product
Length = 416
Score = 27.7 bits (60), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 38 DMINEVDADENVESNLQYAELFVYHGNGTIDFPEFLTMMARKMKDTD 84
D V E V +L + E++ YH +G+ E M+AR T+
Sbjct: 57 DSCEMVQLTEEVPRDLMFHEVYPYHSSGSSVMREHFAMLARDFLATE 103
>pdb|2JMM|A Chain A, Nmr Solution Structure Of A Minimal Transmembrane Beta-
Barrel Platform Protein
Length = 156
Score = 27.3 bits (59), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 11/12 (91%), Positives = 12/12 (100%)
Query: 97 DKDGNGFISAAE 108
DKDGNG+ISAAE
Sbjct: 90 DKDGNGYISAAE 101
Score = 27.3 bits (59), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 11/12 (91%), Positives = 12/12 (100%)
Query: 178 DKDGNGFISAAE 189
DKDGNG+ISAAE
Sbjct: 90 DKDGNGYISAAE 101
>pdb|4GXT|A Chain A, The Crystal Structure Of A Conserved Functionally Unknown
Protein From Anaerococcus Prevotii Dsm 20548
Length = 385
Score = 27.3 bits (59), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 75 MMARKMKDTDSEEEIREAFRVFDKDGNGFISAAE---LRHVMTNLGEKLTDEEVDEMIRE 131
++A+ KD ++ + F VFD D I E L + + N+ K EE E+IR+
Sbjct: 24 LIAKHGKDNEAYNPDNKPFAVFDWDNTSIIGDVEEALLYYXVRNVSFKXDPEEFYELIRK 83
Score = 27.3 bits (59), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 156 MMARKMKDTDSEEEIREAFRVFDKDGNGFISAAE---LRHVMTNLGEKLTDEEVDEMIRE 212
++A+ KD ++ + F VFD D I E L + + N+ K EE E+IR+
Sbjct: 24 LIAKHGKDNEAYNPDNKPFAVFDWDNTSIIGDVEEALLYYXVRNVSFKXDPEEFYELIRK 83
>pdb|1KSM|A Chain A, Average Nmr Solution Structure Of Ca Ln Calbindin D9k
pdb|1KQV|A Chain A, Family Of Nmr Solution Structures Of Ca Ln Calbindin D9k
Length = 79
Score = 27.3 bits (59), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 206 VDEMIREADIDGDGQVNYEVYTIYCVHI 233
+DE+ E D +GDG+V++E + + I
Sbjct: 50 LDELFEELDKNGDGEVSFEEFQVLVKKI 77
>pdb|4ICB|A Chain A, Proline Cis-Trans Isomers In Calbindin D9k Observed By X-
Ray Crystallography
Length = 76
Score = 26.9 bits (58), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 206 VDEMIREADIDGDGQVNYEVYTIYCVHI 233
+DE+ E D +GDG+V++E + + I
Sbjct: 47 LDELFEELDKNGDGEVSFEEFQVLVKKI 74
>pdb|4F52|A Chain A, Structure Of A Glomulin-Rbx1-Cul1 Complex
pdb|4F52|C Chain C, Structure Of A Glomulin-Rbx1-Cul1 Complex
Length = 282
Score = 26.9 bits (58), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 26/138 (18%), Positives = 62/138 (44%), Gaps = 17/138 (12%)
Query: 22 TVMRSLGQNPTEAELQDMINEV-DADENVESNLQYAELFVYHGNGTIDFPEFLTMMARKM 80
++++ +NP EAEL+D +N+V + + +E + + + M+A+++
Sbjct: 20 SLLKKSSKNPEEAELEDTLNQVMEKFKKIEDKDVFQKFYA-------------KMLAKRL 66
Query: 81 KDTDSEEEIREAFRVFD-KDGNGFISAAELRHVMTNLG--EKLTDEEVDEMIREADIDGD 137
+S + EA + K GF ++L+ + ++G + L ++ + +D D
Sbjct: 67 VHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSEPLDLD 126
Query: 138 GQVNYEGNGTIDFPEFLT 155
+ +G+ F + T
Sbjct: 127 FSIQVLSSGSWPFQQSCT 144
>pdb|1N65|A Chain A, Family Of Nmr Solution Structures Of Ca Ce Calbindin D9k
In Denaturating Conditions
Length = 75
Score = 26.9 bits (58), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 206 VDEMIREADIDGDGQVNYEVYTIYCVHI 233
+DE+ E D +GDG+V++E + + I
Sbjct: 46 LDELFEELDKNGDGEVSFEEFQVLVKKI 73
>pdb|1CDN|A Chain A, Solution Structure Of (Cd2+)1-Calbindin D9k Reveals
Details Of The Stepwise Structural Changes Along The
Apo--> (Ca2+) Ii1--> (Ca2+)i,Ii2 Binding Pathway
pdb|1CLB|A Chain A, Determination Of The Solution Structure Of Apo Calbindin
D9k By Nmr Spectroscopy
pdb|2BCA|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
Length = 76
Score = 26.9 bits (58), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 206 VDEMIREADIDGDGQVNYEVYTIYCVHI 233
+DE+ E D +GDG+V++E + + I
Sbjct: 47 LDELFEELDKNGDGEVSFEEFQVLVKKI 74
>pdb|1HT9|A Chain A, Domain Swapping Ef-Hands
pdb|1HT9|B Chain B, Domain Swapping Ef-Hands
Length = 76
Score = 26.9 bits (58), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 206 VDEMIREADIDGDGQVNYEVYTIYCVHI 233
+DE+ E D +GDG+V++E + + I
Sbjct: 47 LDELFEELDKNGDGEVSFEEFQVLVKKI 74
>pdb|1J7Q|A Chain A, Solution Structure And Backbone Dynamics Of The Defunct
Ef- Hand Domain Of Calcium Vector Protein
pdb|1J7R|A Chain A, Solution Structure And Backbone Dynamics Of The Defunct
Ef- Hand Domain Of Calcium Vector Protein
Length = 86
Score = 26.9 bits (58), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 11/47 (23%), Positives = 26/47 (55%)
Query: 86 EEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 132
++E + F +FD++ ++ ++T LG+ T E + +++EA
Sbjct: 13 KDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEA 59
Score = 26.9 bits (58), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 11/47 (23%), Positives = 26/47 (55%)
Query: 167 EEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 213
++E + F +FD++ ++ ++T LG+ T E + +++EA
Sbjct: 13 KDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEA 59
>pdb|3RTR|A Chain A, A Ring E3-Substrate Complex Poised For Ubiquitin-Like
Protein Transfer: Structural Insights Into Cullin-Ring
Ligases
pdb|3RTR|C Chain C, A Ring E3-Substrate Complex Poised For Ubiquitin-Like
Protein Transfer: Structural Insights Into Cullin-Ring
Ligases
pdb|3RTR|E Chain E, A Ring E3-Substrate Complex Poised For Ubiquitin-Like
Protein Transfer: Structural Insights Into Cullin-Ring
Ligases
pdb|3RTR|G Chain G, A Ring E3-Substrate Complex Poised For Ubiquitin-Like
Protein Transfer: Structural Insights Into Cullin-Ring
Ligases
Length = 368
Score = 26.9 bits (58), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 26/138 (18%), Positives = 62/138 (44%), Gaps = 17/138 (12%)
Query: 22 TVMRSLGQNPTEAELQDMINEV-DADENVESNLQYAELFVYHGNGTIDFPEFLTMMARKM 80
++++ +NP EAEL+D +N+V + + +E + + + M+A+++
Sbjct: 20 SLLKKSSKNPEEAELEDTLNQVMEKFKKIEDKDVFQKFYA-------------KMLAKRL 66
Query: 81 KDTDSEEEIREAFRVFD-KDGNGFISAAELRHVMTNLG--EKLTDEEVDEMIREADIDGD 137
+S + EA + K GF ++L+ + ++G + L ++ + +D D
Sbjct: 67 VHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSEPLDLD 126
Query: 138 GQVNYEGNGTIDFPEFLT 155
+ +G+ F + T
Sbjct: 127 FSIQVLSSGSWPFQQSCT 144
>pdb|1BOC|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 76
Score = 26.9 bits (58), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 206 VDEMIREADIDGDGQVNYEVYTIYCVHI 233
+DE+ E D +GDG+V++E + + I
Sbjct: 47 LDELFEELDKNGDGEVSFEEFQVLVKKI 74
>pdb|1KCY|A Chain A, Nmr Solution Structure Of Apo Calbindin D9k (F36g + P43m
Mutant)
Length = 75
Score = 26.9 bits (58), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 206 VDEMIREADIDGDGQVNYEVYTIYCVHI 233
+DE+ E D +GDG+V++E + + I
Sbjct: 46 LDELFEELDKNGDGEVSFEEFQVLVKKI 73
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.135 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,742,537
Number of Sequences: 62578
Number of extensions: 354635
Number of successful extensions: 3115
Number of sequences better than 100.0: 374
Number of HSP's better than 100.0 without gapping: 284
Number of HSP's successfully gapped in prelim test: 90
Number of HSP's that attempted gapping in prelim test: 949
Number of HSP's gapped (non-prelim): 1108
length of query: 243
length of database: 14,973,337
effective HSP length: 96
effective length of query: 147
effective length of database: 8,965,849
effective search space: 1317979803
effective search space used: 1317979803
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 50 (23.9 bits)