BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7437
(279 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9U1N0|HRP65_CHITE Hrp65 protein OS=Chironomus tentans GN=HRP65 PE=1 SV=1
Length = 535
Score = 244 bits (624), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 122/246 (49%), Positives = 168/246 (68%), Gaps = 39/246 (15%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
+ERAV++VDDRG + EGI+EF RK A ALK C + +FLT SL+P +VE D +D+
Sbjct: 213 VERAVIIVDDRGKTTGEGIVEFARKSGAMSALKYCSEKCYFLTSSLRPCVVETFDHIDET 272
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYELYKQKEEALQKELKLE 122
+G E+++ +KS+DY+K R GPRFA +GSFE E+GT+WKQ+Y++YKQK +AL++E++LE
Sbjct: 273 DGFPEKSLMRKSNDYYKARQNGPRFAEMGSFEHEFGTKWKQMYDMYKQKHDALKREMQLE 332
Query: 123 EEKLEAQMEFARYENETEILRERECRFVEEALQKELKLEEEKLEAQMEFARYENETEILR 182
EEKLEAQME+A++E+ETE LR
Sbjct: 333 EEKLEAQMEYAKFEHETE---------------------------------------SLR 353
Query: 183 EQLRQREADRERQKQEWELKERHAEEQRRCDEEAMRRQTEEIHLRMQQQDEELRRRHQEN 242
EQLR+RE DR+RQK+EWE +ER A+E R DE+ MRRQ +++ +RMQ+QDEE+RRR QEN
Sbjct: 354 EQLRKREQDRDRQKKEWEDRERQADESRIRDEQQMRRQQDDMQMRMQRQDEEMRRRQQEN 413
Query: 243 SIFMQV 248
S+FMQ
Sbjct: 414 SLFMQA 419
>sp|Q9GRW7|NONA_DROVI Protein no-on-transient A OS=Drosophila virilis GN=nonA PE=2 SV=1
Length = 697
Score = 224 bits (570), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 113/246 (45%), Positives = 164/246 (66%), Gaps = 39/246 (15%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
IERA + VDDRG EG +EF +K +A+ L+ C + FFLT SL+P +VEP+++ DD
Sbjct: 385 IERASITVDDRGKHLGEGTVEFAKKSSASACLRLCNEKCFFLTASLRPCLVEPMEVNDDN 444
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYELYKQKEEALQKELKLE 122
+GL E+ ++KK ++ ++RS+GPRFA + SFE EYG+RWKQL++L+K K++AL++ELK+E
Sbjct: 445 DGLPEKALNKKLQEFNQERSVGPRFADLNSFEHEYGSRWKQLHDLFKSKQDALKRELKME 504
Query: 123 EEKLEAQMEFARYENETEILRERECRFVEEALQKELKLEEEKLEAQMEFARYENETEILR 182
EEKL+AQME+ARYE ETE +LR
Sbjct: 505 EEKLDAQMEYARYEQETE---------------------------------------LLR 525
Query: 183 EQLRQREADRERQKQEWELKERHAEEQRRCDEEAMRRQTEEIHLRMQQQDEELRRRHQEN 242
++LR+RE+D ER+K EWE++E+ AEE R+ +EE MRR E+ RM +Q+E++RRR QEN
Sbjct: 526 QELRKRESDNERKKLEWEMREKQAEEMRKREEETMRRHQTEMQSRMVRQEEDMRRRQQEN 585
Query: 243 SIFMQV 248
++FMQ
Sbjct: 586 TLFMQA 591
>sp|Q9GRX4|NONA_DROLR Protein no-on-transient A OS=Drosophila littoralis GN=nonA PE=2
SV=1
Length = 698
Score = 219 bits (559), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 111/246 (45%), Positives = 162/246 (65%), Gaps = 39/246 (15%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
IERA + VDDRG EG +EF +K +A+ L+ C + FFLT SL+P +VEP+++ DD
Sbjct: 381 IERASITVDDRGKHLGEGTVEFAKKSSASACLRLCNEKCFFLTASLRPCLVEPMEVNDDN 440
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYELYKQKEEALQKELKLE 122
+GL E+ ++KK ++ ++RS+GPRFA + SFE EYG+RWKQL++L+K K++AL++ELK+E
Sbjct: 441 DGLPEKALNKKLQEFNQERSVGPRFADLNSFEHEYGSRWKQLHDLFKSKQDALKRELKME 500
Query: 123 EEKLEAQMEFARYENETEILRERECRFVEEALQKELKLEEEKLEAQMEFARYENETEILR 182
EEKL+AQME+ARY ET E+ R
Sbjct: 501 EEKLDAQMEYARYGQET---------------------------------------ELSR 521
Query: 183 EQLRQREADRERQKQEWELKERHAEEQRRCDEEAMRRQTEEIHLRMQQQDEELRRRHQEN 242
++LR+RE+D ER+K EWE++E+ AEE R+ +EE MRR E+ RM +Q+E++RRR QEN
Sbjct: 522 QELRKRESDNERKKLEWEMREKQAEEMRKREEETMRRHQTEMQSRMVRQEEDMRRRQQEN 581
Query: 243 SIFMQV 248
++FMQ
Sbjct: 582 TLFMQA 587
>sp|Q04047|NONA_DROME Protein no-on-transient A OS=Drosophila melanogaster GN=nonA PE=1
SV=2
Length = 700
Score = 215 bits (547), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 111/246 (45%), Positives = 158/246 (64%), Gaps = 40/246 (16%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
IERA + VDDRG EGI+EF +K +A+ L+ C + FFLT SL+P +V+P+++ DD
Sbjct: 402 IERASITVDDRGKHMGEGIVEFAKKSSASACLRMCNEKCFFLTASLRPCLVDPMEVNDDT 461
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYELYKQKEEALQKELKLE 122
+GL E+ +KK D+ ++RSIGPRFA SFE EYG+RWKQL+ L+K K++AL++ELK+E
Sbjct: 462 DGLPEKAFNKKMPDFNQERSIGPRFADPNSFEHEYGSRWKQLHNLFKTKQDALKRELKME 521
Query: 123 EEKLEAQMEFARYENETEILRERECRFVEEALQKELKLEEEKLEAQMEFARYENETEILR 182
E+KLEAQME+ARYE ETE+ LR
Sbjct: 522 EDKLEAQMEYARYEQETEL---------------------------------------LR 542
Query: 183 EQLRQREADRERQKQEWELKERHAEEQRRCDEEAMRRQTEEIHLRMQQQDEELRRRHQEN 242
++LR+RE D ER+K EWE++E+ AEE R+ +EE MRR E+ M +Q+E++ RR QE
Sbjct: 543 QELRKREVDNERKKLEWEMREKQAEEMRKREEETMRRHQTEMQSHMNRQEEDMLRRQQE- 601
Query: 243 SIFMQV 248
++FM+
Sbjct: 602 TLFMKA 607
>sp|Q8VIJ6|SFPQ_MOUSE Splicing factor, proline- and glutamine-rich OS=Mus musculus
GN=Sfpq PE=1 SV=1
Length = 699
Score = 151 bits (382), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/230 (43%), Positives = 148/230 (64%), Gaps = 22/230 (9%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
IERAVV+VDDRG S +GI+EF KPAA +A +RC +GVF LT + +PVIVEPL+ +DDE
Sbjct: 389 IERAVVIVDDRGRSTGKGIVEFASKPAARKAFERCSEGVFLLTTTPRPVIVEPLEQLDDE 448
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYELYKQKEEALQKELKLE 122
+GL E+ +++K+ Y K+R PRFA G+FE+EY RWK L E+ KQ+ E ++K +K
Sbjct: 449 DGLPEK-LAQKNPMYQKERETPPRFAQHGTFEYEYSQRWKSLDEMEKQQREQVEKNMKDA 507
Query: 123 EEKLEAQMEFARYENETEILRERECRFVEEALQKELKLEEEKLEAQMEFARYENETEILR 182
++KLE++ME A +E++ +LR+ R EE L++ +L ++++ + E
Sbjct: 508 KDKLESEMEDAYHEHQANLLRQDLMRRQEE-LRRMEELHSQEMQKRKEM----------- 555
Query: 183 EQLRQREADRERQKQEWELKERHAEEQRRCDEEAMRRQTEEIHLRMQQQD 232
QLRQ E R R+++E +++R EEQ MRRQ EE + RM D
Sbjct: 556 -QLRQEEE-RRRREEEMMIRQREMEEQ-------MRRQREESYSRMGYMD 596
>sp|P23246|SFPQ_HUMAN Splicing factor, proline- and glutamine-rich OS=Homo sapiens
GN=SFPQ PE=1 SV=2
Length = 707
Score = 151 bits (381), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 100/230 (43%), Positives = 148/230 (64%), Gaps = 22/230 (9%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
IERAVV+VDDRG S +GI+EF KPAA +A +RC +GVF LT + +PVIVEPL+ +DDE
Sbjct: 397 IERAVVIVDDRGRSTGKGIVEFASKPAARKAFERCSEGVFLLTTTPRPVIVEPLEQLDDE 456
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYELYKQKEEALQKELKLE 122
+GL E+ +++K+ Y K+R PRFA G+FE+EY RWK L E+ KQ+ E ++K +K
Sbjct: 457 DGLPEK-LAQKNPMYQKERETPPRFAQHGTFEYEYSQRWKSLDEMEKQQREQVEKNMKDA 515
Query: 123 EEKLEAQMEFARYENETEILRERECRFVEEALQKELKLEEEKLEAQMEFARYENETEILR 182
++KLE++ME A +E++ +LR+ R EE L++ +L ++++ + E
Sbjct: 516 KDKLESEMEDAYHEHQANLLRQDLMRRQEE-LRRMEELHNQEMQKRKEM----------- 563
Query: 183 EQLRQREADRERQKQEWELKERHAEEQRRCDEEAMRRQTEEIHLRMQQQD 232
QLRQ E R R+++E +++R EEQ MRRQ EE + RM D
Sbjct: 564 -QLRQEEE-RRRREEEMMIRQREMEEQ-------MRRQREESYSRMGYMD 604
>sp|Q5ZK88|PSPC1_CHICK Paraspeckle component 1 OS=Gallus gallus GN=PSPC1 PE=2 SV=1
Length = 523
Score = 146 bits (368), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 103/142 (72%), Gaps = 1/142 (0%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
+ERAVV+VDDRG + +G +EF KP A +AL+RC DG F LT + +PV+VEP++ DDE
Sbjct: 181 VERAVVVVDDRGRATGKGFVEFAAKPPARKALERCSDGAFLLTTTPRPVVVEPMEQFDDE 240
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYELYKQKEEALQKELKLE 122
+GL E+ + +K+ Y K+R PRFA G+FEFEY +RWK L E+ KQ+ E + + ++
Sbjct: 241 DGLPEKLM-QKTQQYHKEREQPPRFAQPGTFEFEYASRWKALDEMEKQQREQVDRNIREA 299
Query: 123 EEKLEAQMEFARYENETEILRE 144
+EKLEA+ME AR+E++ ++R+
Sbjct: 300 KEKLEAEMEAARHEHQLMLMRQ 321
>sp|Q8WXF1|PSPC1_HUMAN Paraspeckle component 1 OS=Homo sapiens GN=PSPC1 PE=1 SV=1
Length = 523
Score = 145 bits (366), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 103/142 (72%), Gaps = 1/142 (0%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
+E+AVV+VDDRG + +G +EF KP A +AL+RC DG F LT + +PVIVEP++ DDE
Sbjct: 182 VEKAVVVVDDRGRATGKGFVEFAAKPPARKALERCGDGAFLLTTTPRPVIVEPMEQFDDE 241
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYELYKQKEEALQKELKLE 122
+GL E+ + +K+ Y K+R PRFA G+FEFEY +RWK L E+ KQ+ E + + ++
Sbjct: 242 DGLPEKLM-QKTQQYHKEREQPPRFAQPGTFEFEYASRWKALDEMEKQQREQVDRNIREA 300
Query: 123 EEKLEAQMEFARYENETEILRE 144
+EKLEA+ME AR+E++ ++R+
Sbjct: 301 KEKLEAEMEAARHEHQLMLMRQ 322
>sp|Q4KLH4|PSPC1_RAT Paraspeckle component 1 OS=Rattus norvegicus GN=Pspc1 PE=2 SV=1
Length = 522
Score = 145 bits (366), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 103/142 (72%), Gaps = 1/142 (0%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
+E+AVV+VDDRG + +G +EF KP A +AL+RC DG F LT + +PVIVEP++ DDE
Sbjct: 181 VEKAVVVVDDRGRATGKGFVEFAAKPPARKALERCGDGAFLLTTTPRPVIVEPMEQFDDE 240
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYELYKQKEEALQKELKLE 122
+GL E+ + +K+ Y K+R PRFA G+FEFEY +RWK L E+ KQ+ E + + ++
Sbjct: 241 DGLPEKLM-QKTQQYHKEREQPPRFAQPGTFEFEYASRWKALDEMEKQQREQVDRNIREA 299
Query: 123 EEKLEAQMEFARYENETEILRE 144
+EKLEA+ME AR+E++ ++R+
Sbjct: 300 KEKLEAEMEAARHEHQLMLMRQ 321
>sp|Q99K48|NONO_MOUSE Non-POU domain-containing octamer-binding protein OS=Mus musculus
GN=Nono PE=1 SV=3
Length = 473
Score = 145 bits (366), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 100/142 (70%), Gaps = 1/142 (0%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
+ERAVV+VDDRG +GI+EF+ KPAA +AL RC +G F LT +PV VEP+D +DDE
Sbjct: 176 VERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLTTFPRPVTVEPMDQLDDE 235
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYELYKQKEEALQKELKLE 122
EGL E+ V K+ + K+R PRFA GSFE+EY RWK L E+ KQ+++ + + +K
Sbjct: 236 EGLPEKLVI-KNQQFHKEREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQDQVDRNIKEA 294
Query: 123 EEKLEAQMEFARYENETEILRE 144
EKLE +ME AR+E++ ++R+
Sbjct: 295 REKLEMEMEAARHEHQVMLMRQ 316
>sp|Q8R326|PSPC1_MOUSE Paraspeckle component 1 OS=Mus musculus GN=Pspc1 PE=1 SV=1
Length = 523
Score = 145 bits (365), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 103/142 (72%), Gaps = 1/142 (0%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
+E+AVV+VDDRG + +G +EF KP A +AL+RC DG F LT + +PVIVEP++ DDE
Sbjct: 181 VEKAVVVVDDRGRATGKGFVEFAAKPPARKALERCGDGAFLLTTTPRPVIVEPMEQFDDE 240
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYELYKQKEEALQKELKLE 122
+GL E+ + +K+ Y K+R PRFA G+FEFEY +RWK L E+ KQ+ E + + ++
Sbjct: 241 DGLPEKLM-QKTQQYHKEREQPPRFAQPGTFEFEYASRWKALDEMEKQQREQVDRNIREA 299
Query: 123 EEKLEAQMEFARYENETEILRE 144
+EKLEA+ME AR+E++ ++R+
Sbjct: 300 KEKLEAEMEAARHEHQLMLMRQ 321
>sp|Q5RFL9|NONO_PONAB Non-POU domain-containing octamer-binding protein OS=Pongo abelii
GN=NONO PE=2 SV=3
Length = 471
Score = 145 bits (365), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 100/142 (70%), Gaps = 1/142 (0%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
+ERAVV+VDDRG +GI+EF+ KPAA +AL RC +G F LT +PV VEP+D +DDE
Sbjct: 174 VERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLTTFPRPVTVEPMDQLDDE 233
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYELYKQKEEALQKELKLE 122
EGL E+ V K+ + K+R PRFA GSFE+EY RWK L E+ KQ+++ + + +K
Sbjct: 234 EGLPEKLVI-KNQQFHKEREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQDQVDRNIKEA 292
Query: 123 EEKLEAQMEFARYENETEILRE 144
EKLE +ME AR+E++ ++R+
Sbjct: 293 REKLEMEMEAARHEHQVMLMRQ 314
>sp|Q15233|NONO_HUMAN Non-POU domain-containing octamer-binding protein OS=Homo sapiens
GN=NONO PE=1 SV=4
Length = 471
Score = 145 bits (365), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 100/142 (70%), Gaps = 1/142 (0%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
+ERAVV+VDDRG +GI+EF+ KPAA +AL RC +G F LT +PV VEP+D +DDE
Sbjct: 174 VERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLTTFPRPVTVEPMDQLDDE 233
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYELYKQKEEALQKELKLE 122
EGL E+ V K+ + K+R PRFA GSFE+EY RWK L E+ KQ+++ + + +K
Sbjct: 234 EGLPEKLVI-KNQQFHKEREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQDQVDRNIKEA 292
Query: 123 EEKLEAQMEFARYENETEILRE 144
EKLE +ME AR+E++ ++R+
Sbjct: 293 REKLEMEMEAARHEHQVMLMRQ 314
>sp|Q1LZD9|PSPC1_BOVIN Paraspeckle component 1 OS=Bos taurus GN=PSPC1 PE=2 SV=1
Length = 520
Score = 145 bits (365), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 103/142 (72%), Gaps = 1/142 (0%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
+E+AVV+VDDRG + +G +EF KP A +AL+RC DG F LT + +PVIVEP++ DDE
Sbjct: 179 VEKAVVVVDDRGRATGKGFVEFAAKPPARKALERCGDGAFLLTTTPRPVIVEPMEQFDDE 238
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYELYKQKEEALQKELKLE 122
+GL E+ + +K+ Y K+R PRFA G+FEFEY +RWK L E+ KQ+ E + + ++
Sbjct: 239 DGLPEKLM-QKTQQYHKEREQPPRFAQPGTFEFEYASRWKALDEMEKQQREQVDRNIREA 297
Query: 123 EEKLEAQMEFARYENETEILRE 144
+EKLEA+ME AR+E++ ++R+
Sbjct: 298 KEKLEAEMEAARHEHQLMLMRQ 319
>sp|Q5FVM4|NONO_RAT Non-POU domain-containing octamer-binding protein OS=Rattus
norvegicus GN=Nono PE=2 SV=3
Length = 476
Score = 145 bits (365), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 100/142 (70%), Gaps = 1/142 (0%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
+ERAVV+VDDRG +GI+EF+ KPAA +AL RC +G F LT +PV VEP+D +DDE
Sbjct: 179 VERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLTTFPRPVTVEPMDQLDDE 238
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYELYKQKEEALQKELKLE 122
EGL E+ V K+ + K+R PRFA GSFE+EY RWK L E+ KQ+++ + + +K
Sbjct: 239 EGLPEKLVI-KNQQFHKEREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQDQVDRNIKEA 297
Query: 123 EEKLEAQMEFARYENETEILRE 144
EKLE +ME AR+E++ ++R+
Sbjct: 298 REKLEMEMEAARHEHQVMLMRQ 319
>sp|Q1JPY8|PSPC1_DANRE Paraspeckle component 1 OS=Danio rerio GN=pspc1 PE=2 SV=1
Length = 512
Score = 137 bits (346), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 67/142 (47%), Positives = 99/142 (69%), Gaps = 1/142 (0%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
+ERA+V+VDDRG +GI+EF KPAA +AL C DG LT S +PVI+EP + DDE
Sbjct: 176 VERAIVIVDDRGRPTGKGIVEFANKPAARKALDHCADGALLLTTSPRPVILEPTEQYDDE 235
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYELYKQKEEALQKELKLE 122
+GL E+ + +KS+ Y K+R P FA G+FEFEY +RWK L E+ KQ+ E +++ ++
Sbjct: 236 DGLPEKLL-QKSAQYHKEREHKPHFAQPGTFEFEYSSRWKALDEMDKQQREQVERNIQEA 294
Query: 123 EEKLEAQMEFARYENETEILRE 144
+EKLE +ME A+ E++ ++R+
Sbjct: 295 KEKLETEMEAAKQEHQLMMMRQ 316
>sp|Q8SX83|SPEN_DROME Protein split ends OS=Drosophila melanogaster GN=spen PE=1 SV=2
Length = 5560
Score = 34.7 bits (78), Expect = 0.71, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 155 QKELKLEEEKLEAQMEFARYENETEILREQLRQREADRERQKQEWEL-KERHAEEQRRCD 213
QKE ++ E+ L + + R E E+ + LR++E RE++++E EL +E+ E+ +
Sbjct: 2000 QKEKEIREKDLREKEQRERDNREKELRDKDLREKEM-REKEQREKELHREKDQREREHRE 2058
Query: 214 EEAMRRQTE 222
+E RR +
Sbjct: 2059 KEQSRRAMD 2067
>sp|A6RW62|NST1_BOTFB Stress response protein nst1 OS=Botryotinia fuckeliana (strain
B05.10) GN=nst1 PE=3 SV=1
Length = 1168
Score = 33.5 bits (75), Expect = 1.9, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 8/82 (9%)
Query: 160 LEEEKLEAQMEFARYENETEILREQLRQREADRERQKQEWELKERHAEEQRRCDEEAMRR 219
+ EEK E A E LRE + +++A+ +R K+E K++ E Q++ DEE R
Sbjct: 527 MAEEKARKDAEKAAEEAS---LRE-IEEKKAEAQRLKREENRKKK--EAQKKADEEERVR 580
Query: 220 QTEEIHLRMQQQDEELRRRHQE 241
+ E R+Q+Q E R+ QE
Sbjct: 581 KESEKQRRLQEQRE--RQAEQE 600
Score = 32.7 bits (73), Expect = 2.8, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 140 EILRERECRFVEEALQKELKLEEEKLEAQMEFARYENETEILREQLRQREADRERQKQEW 199
E R+ + EEA +E+ EE+K EAQ R EN +++ Q++AD E + ++
Sbjct: 530 EKARKDAEKAAEEASLREI--EEKKAEAQ-RLKREENR----KKKEAQKKADEEERVRKE 582
Query: 200 ELKERHAEEQRRCDEEAMRRQ 220
K+R +EQR E R+Q
Sbjct: 583 SEKQRRLQEQRERQAEQERKQ 603
>sp|A7EMM3|NST1_SCLS1 Stress response protein nst1 OS=Sclerotinia sclerotiorum (strain
ATCC 18683 / 1980 / Ss-1) GN=nst1 PE=3 SV=1
Length = 1171
Score = 32.3 bits (72), Expect = 3.5, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 181 LREQLRQREADRERQKQEWELKERHAEEQRRCDEEAMRRQTEEIHLRMQQQDEELRRRHQ 240
LRE + +++A+ +R K+E K++ E Q++ DEE R+ E R+Q+Q E R+ Q
Sbjct: 597 LRE-IEEKKAEEQRLKREENRKKK--EAQKKADEEERVRKEAEKQRRLQEQRE--RQAEQ 651
Query: 241 E 241
E
Sbjct: 652 E 652
>sp|C0H5F4|RBP2B_PLAF7 Reticulocyte binding protein 2 homolog b OS=Plasmodium falciparum
(isolate 3D7) GN=Rh2b PE=3 SV=1
Length = 3179
Score = 32.0 bits (71), Expect = 4.7, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 48/88 (54%)
Query: 150 VEEALQKELKLEEEKLEAQMEFARYENETEILREQLRQREADRERQKQEWELKERHAEEQ 209
+E Q++LK E K + Q + + E + R++ + + + E ++QE E ER +EQ
Sbjct: 2633 LEREKQEQLKKEALKKQEQERQEQQQKEEALKRQEQERLQKEEELKRQEQERLEREKQEQ 2692
Query: 210 RRCDEEAMRRQTEEIHLRMQQQDEELRR 237
+ +EE +++ E+ R Q+ EE ++
Sbjct: 2693 LQKEEELRKKEQEKQQQRNIQELEEQKK 2720
>sp|Q91785|KI15A_XENLA Kinesin-like protein KIF15-A OS=Xenopus laevis GN=kif15-a PE=1 SV=1
Length = 1388
Score = 31.2 bits (69), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 8/140 (5%)
Query: 105 YELYKQKEEALQKELKLEEEKLEAQMEFARYENETEILRERECRFVEEALQKELKLEEEK 164
Y LY++K+E +L ++ Q++ R E+ET + +R + + L++ +K E ++
Sbjct: 827 YSLYREKQEKELSQLSARHMDVQLQLDNVRLEHETLLEEKRSLQDAFDNLEEVMKFEIDQ 886
Query: 165 LEAQMEFARYENET---EILREQLRQREADRERQKQEWEL---KERHAEEQRRCDEEAM- 217
L+ ++ +++ENET E RQK +L KE +E + +E M
Sbjct: 887 LKQEISDSKHENETLRAEFSNLLELLETEKERRQKLTSQLEEDKENKTKELLQVVDENMH 946
Query: 218 -RRQTEEIHLRMQQQDEELR 236
R+Q E+ + +QQ EL
Sbjct: 947 LRKQCSELMTKCEQQVTELH 966
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,261,139
Number of Sequences: 539616
Number of extensions: 4290620
Number of successful extensions: 66846
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 2923
Number of HSP's that attempted gapping in prelim test: 35022
Number of HSP's gapped (non-prelim): 18572
length of query: 279
length of database: 191,569,459
effective HSP length: 116
effective length of query: 163
effective length of database: 128,974,003
effective search space: 21022762489
effective search space used: 21022762489
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)