Your job contains 1 sequence.
>psy7437
MNIERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVD
DEEGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYELYKQKEEALQKELK
LEEEKLEAQMEFARYENETEILRERECRFVEEALQKELKLEEEKLEAQMEFARYENETEI
LREQLRQREADRERQKQEWELKERHAEEQRRCDEEAMRRQTEEIHLRMQQQDEELRRRHQ
ENSIFMQVIVWLGDLKQGVYQLGLTEGPFICECNNKMKN
The BLAST search returned 7 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy7437
(279 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q9U1N0 - symbol:HRP65 "Hrp65 protein" species:7... 362 4.2e-33 1
UNIPROTKB|Q9GRW7 - symbol:nonA "Protein no-on-transient A... 358 5.4e-32 1
FB|FBgn0004227 - symbol:nonA "no on or off transient A" s... 357 7.1e-32 1
ZFIN|ZDB-GENE-030131-9530 - symbol:pspc1 "paraspeckle com... 287 1.7e-31 2
FB|FBgn0015520 - symbol:nonA-l "nonA-like" species:7227 "... 351 2.3e-31 1
UNIPROTKB|Q9GRX4 - symbol:nonA "Protein no-on-transient A... 345 1.4e-30 1
UNIPROTKB|F1N941 - symbol:PSPC1 "Paraspeckle component 1"... 336 3.7e-30 1
UNIPROTKB|Q91017 - symbol:SFPQ "Uncharacterized protein" ... 330 7.9e-30 1
UNIPROTKB|F1P555 - symbol:SFPQ "Uncharacterized protein" ... 337 8.2e-30 1
UNIPROTKB|F1LQW3 - symbol:Sfpq "Protein Sfpq" species:101... 335 1.1e-29 1
UNIPROTKB|F1P7J0 - symbol:SFPQ "Uncharacterized protein" ... 335 1.4e-29 1
MGI|MGI:1918764 - symbol:Sfpq "splicing factor proline/gl... 335 1.7e-29 1
RGD|727923 - symbol:Sfpq "splicing factor proline/glutami... 335 1.7e-29 1
UNIPROTKB|E1BQ37 - symbol:SFPQ "Uncharacterized protein" ... 335 1.8e-29 1
UNIPROTKB|P23246 - symbol:SFPQ "Splicing factor, proline-... 335 1.8e-29 1
UNIPROTKB|Q5ZIZ5 - symbol:NONO "Uncharacterized protein" ... 323 4.6e-29 1
UNIPROTKB|Q5ZK88 - symbol:PSPC1 "Paraspeckle component 1"... 321 1.9e-28 1
UNIPROTKB|E1C0S2 - symbol:PSPC1 "Paraspeckle component 1"... 317 5.3e-28 1
UNIPROTKB|H7C367 - symbol:NONO "Non-POU domain-containing... 312 6.4e-28 1
MGI|MGI:1913895 - symbol:Pspc1 "paraspeckle protein 1" sp... 316 6.8e-28 1
UNIPROTKB|J9P3Z0 - symbol:J9P3Z0 "Uncharacterized protein... 250 6.9e-28 2
UNIPROTKB|Q2KJ42 - symbol:NONO "Uncharacterized protein" ... 312 9.0e-28 1
UNIPROTKB|F1PTP3 - symbol:NONO "Uncharacterized protein" ... 312 9.0e-28 1
UNIPROTKB|Q15233 - symbol:NONO "Non-POU domain-containing... 312 9.2e-28 1
UNIPROTKB|I3LSU1 - symbol:NONO "Uncharacterized protein" ... 312 9.2e-28 1
UNIPROTKB|F1RN28 - symbol:PSPC1 "Uncharacterized protein"... 311 9.3e-28 1
MGI|MGI:1855692 - symbol:Nono "non-POU-domain-containing,... 312 9.6e-28 1
RGD|1549738 - symbol:Nono "non-POU domain containing, oct... 312 1.0e-27 1
UNIPROTKB|F1Q1U4 - symbol:F1Q1U4 "Uncharacterized protein... 316 1.8e-27 1
UNIPROTKB|G3N361 - symbol:NONO "Uncharacterized protein" ... 312 2.0e-27 1
UNIPROTKB|E2QXH2 - symbol:PSPC1 "Uncharacterized protein"... 311 2.4e-27 1
UNIPROTKB|Q1LZD9 - symbol:PSPC1 "Paraspeckle component 1"... 311 2.4e-27 1
RGD|1310122 - symbol:Pspc1 "paraspeckle component 1" spec... 311 2.4e-27 1
UNIPROTKB|Q8WXF1 - symbol:PSPC1 "Paraspeckle component 1"... 311 2.5e-27 1
UNIPROTKB|E2RIS4 - symbol:E2RIS4 "Uncharacterized protein... 313 3.6e-27 1
ZFIN|ZDB-GENE-030131-713 - symbol:nono "non-POU domain co... 304 4.5e-27 1
UNIPROTKB|F1Q0F6 - symbol:F1Q0F6 "Uncharacterized protein... 304 7.7e-27 1
ZFIN|ZDB-GENE-040426-2452 - symbol:sfpq "splicing factor ... 308 1.1e-26 1
UNIPROTKB|F1M3I1 - symbol:F1M3I1 "Uncharacterized protein... 239 2.1e-25 2
WB|WBGene00017778 - symbol:psf-1 species:6239 "Caenorhabd... 258 1.5e-24 2
UNIPROTKB|F1LVR9 - symbol:F1LVR9 "Uncharacterized protein... 226 2.8e-21 2
UNIPROTKB|F1PM01 - symbol:F1PM01 "Uncharacterized protein... 196 9.9e-19 2
UNIPROTKB|F1M8Q6 - symbol:F1M8Q6 "Uncharacterized protein... 153 1.1e-08 1
UNIPROTKB|E1BU51 - symbol:TNRC15 "Uncharacterized protein... 126 5.2e-05 1
UNIPROTKB|A7MB14 - symbol:GIGYF2 "GIGYF2 protein" species... 127 5.5e-05 1
MGI|MGI:2138584 - symbol:Gigyf2 "GRB10 interacting GYF pr... 126 7.3e-05 1
UNIPROTKB|Q6Y7W6 - symbol:GIGYF2 "PERQ amino acid-rich wi... 126 7.3e-05 1
UNIPROTKB|F1PWP6 - symbol:GIGYF2 "Uncharacterized protein... 126 7.4e-05 1
TAIR|locus:2144593 - symbol:AT5G03710 "AT5G03710" species... 96 0.00016 1
UNIPROTKB|C9IZL7 - symbol:NONO "Non-POU domain-containing... 109 0.00033 1
UNIPROTKB|G3N264 - symbol:TNNT2 "Troponin T, cardiac musc... 92 0.00044 1
ZFIN|ZDB-GENE-040426-1050 - symbol:ddrgk1 "DDRGK domain c... 110 0.00064 1
ZFIN|ZDB-GENE-050309-102 - symbol:itsn2b "intersectin 2b"... 118 0.00084 1
>UNIPROTKB|Q9U1N0 [details] [associations]
symbol:HRP65 "Hrp65 protein" species:7153 "Chironomus
tentans" [GO:0003723 "RNA binding" evidence=NAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006406 "mRNA export from nucleus" evidence=NAS]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0005856
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0006406
EMBL:AJ243013 EMBL:AJ404654 ProteinModelPortal:Q9U1N0
InterPro:IPR012975 Pfam:PF08075 Uniprot:Q9U1N0
Length = 535
Score = 362 (132.5 bits), Expect = 4.2e-33, P = 4.2e-33
Identities = 79/230 (34%), Positives = 123/230 (53%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
+ERAV++VDDRG + EGI+EF RK A ALK C + +FLT SL+P +VE D +D+
Sbjct: 213 VERAVIIVDDRGKTTGEGIVEFARKSGAMSALKYCSEKCYFLTSSLRPCVVETFDHIDET 272
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXXX 122
+G E+++ +KS+DY+K R GPRFA +GSFE E+GT+WKQ+Y
Sbjct: 273 DGFPEKSLMRKSNDYYKARQNGPRFAEMGSFEHEFGTKWKQMYDMYKQKHDALKREMQLE 332
Query: 123 XXXXXXXMEFARYENETEILRERECRFVXXXXXXXXXXXXXXXXXXMEFARYENETEILR 182
ME+A++E+ETE LRE+ + R +E+ I
Sbjct: 333 EEKLEAQMEYAKFEHETESLREQ--------LRKREQDRDRQKKEWEDRERQADESRIRD 384
Query: 183 EQLRQREADRERQKQEWELKERHAEEQRRCDEEAMRRQTEEIHLRMQQQD 232
EQ +R+ D + ++ + E +RR E ++ Q +++ + QQ+
Sbjct: 385 EQQMRRQQD----DMQMRMQRQDEEMRRRQQENSLFMQAQQLSNMLDQQE 430
Score = 277 (102.6 bits), Expect = 1.6e-23, P = 1.6e-23
Identities = 51/79 (64%), Positives = 68/79 (86%)
Query: 169 MEFARYENETEILREQLRQREADRERQKQEWELKERHAEEQRRCDEEAMRRQTEEIHLRM 228
ME+A++E+ETE LREQLR+RE DR+RQK+EWE +ER A+E R DE+ MRRQ +++ +RM
Sbjct: 340 MEYAKFEHETESLREQLRKREQDRDRQKKEWEDRERQADESRIRDEQQMRRQQDDMQMRM 399
Query: 229 QQQDEELRRRHQENSIFMQ 247
Q+QDEE+RRR QENS+FMQ
Sbjct: 400 QRQDEEMRRRQQENSLFMQ 418
>UNIPROTKB|Q9GRW7 [details] [associations]
symbol:nonA "Protein no-on-transient A" species:7244
"Drosophila virilis" [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 GO:GO:0007601 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0050896 InterPro:IPR012975 Pfam:PF08075
eggNOG:NOG298586 OrthoDB:EOG4GTHVF EMBL:AJ298998
ProteinModelPortal:Q9GRW7 FlyBase:FBgn0042729 InParanoid:Q9GRW7
Uniprot:Q9GRW7
Length = 697
Score = 358 (131.1 bits), Expect = 5.4e-32, P = 5.4e-32
Identities = 81/231 (35%), Positives = 124/231 (53%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
IERA + VDDRG EG +EF +K +A+ L+ C + FFLT SL+P +VEP+++ DD
Sbjct: 385 IERASITVDDRGKHLGEGTVEFAKKSSASACLRLCNEKCFFLTASLRPCLVEPMEVNDDN 444
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXXX 122
+GL E+ ++KK ++ ++RS+GPRFA + SFE EYG+RWKQL+
Sbjct: 445 DGLPEKALNKKLQEFNQERSVGPRFADLNSFEHEYGSRWKQLHDLFKSKQDALKRELKME 504
Query: 123 XXXXXXXMEFARYENETEILRERECRFVXXXXXXXXXXXXXXXXXXMEFARYENETEILR 182
ME+ARYE ETE+LR+ E R +E+ E + E +R
Sbjct: 505 EEKLDAQMEYARYEQETELLRQ-ELR----------KRESDNERKKLEWEMREKQAEEMR 553
Query: 183 EQLRQREADRERQKQEWELKERHAEEQRRCDEE-AMRRQTEEIHLRMQQQD 232
+ R+ E R Q + R E+ RR +E + Q ++++ + QQ+
Sbjct: 554 K--REEETMRRHQTEMQSRMVRQEEDMRRRQQENTLFMQAQQLNSLLDQQE 602
Score = 259 (96.2 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 46/79 (58%), Positives = 65/79 (82%)
Query: 169 MEFARYENETEILREQLRQREADRERQKQEWELKERHAEEQRRCDEEAMRRQTEEIHLRM 228
ME+ARYE ETE+LR++LR+RE+D ER+K EWE++E+ AEE R+ +EE MRR E+ RM
Sbjct: 512 MEYARYEQETELLRQELRKRESDNERKKLEWEMREKQAEEMRKREEETMRRHQTEMQSRM 571
Query: 229 QQQDEELRRRHQENSIFMQ 247
+Q+E++RRR QEN++FMQ
Sbjct: 572 VRQEEDMRRRQQENTLFMQ 590
>FB|FBgn0004227 [details] [associations]
symbol:nonA "no on or off transient A" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=IDA]
[GO:0045433 "male courtship behavior, veined wing generated song
production" evidence=NAS;IMP;TAS] [GO:0007601 "visual perception"
evidence=NAS;IMP;TAS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0008187 "poly-pyrimidine tract binding"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0003729 "mRNA binding" evidence=ISS;NAS;TAS]
[GO:0007632 "visual behavior" evidence=NAS] [GO:0042331
"phototaxis" evidence=NAS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 EMBL:AE014298 GO:GO:0007601
GO:GO:0042331 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 GO:GO:0045433 GO:GO:0007632
InterPro:IPR012975 Pfam:PF08075 EMBL:M33496 EMBL:X55902
EMBL:AY119651 PIR:JH0162 PIR:JH0163 RefSeq:NP_001014747.1
RefSeq:NP_523367.2 UniGene:Dm.179 ProteinModelPortal:Q04047
SMR:Q04047 MINT:MINT-810524 STRING:Q04047 PaxDb:Q04047
EnsemblMetazoa:FBtr0074232 GeneID:32603 KEGG:dme:Dmel_CG4211
CTD:32603 FlyBase:FBgn0004227 eggNOG:NOG298586
GeneTree:ENSGT00390000005004 InParanoid:Q04047 KO:K13219
OrthoDB:EOG4GTHVF GenomeRNAi:32603 NextBio:779385 Bgee:Q04047
GermOnline:CG4211 Uniprot:Q04047
Length = 700
Score = 357 (130.7 bits), Expect = 7.1e-32, P = 7.1e-32
Identities = 81/230 (35%), Positives = 122/230 (53%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
IERA + VDDRG EGI+EF +K +A+ L+ C + FFLT SL+P +V+P+++ DD
Sbjct: 402 IERASITVDDRGKHMGEGIVEFAKKSSASACLRMCNEKCFFLTASLRPCLVDPMEVNDDT 461
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXXX 122
+GL E+ +KK D+ ++RSIGPRFA SFE EYG+RWKQL+
Sbjct: 462 DGLPEKAFNKKMPDFNQERSIGPRFADPNSFEHEYGSRWKQLHNLFKTKQDALKRELKME 521
Query: 123 XXXXXXXMEFARYENETEILRERECRFVXXXXXXXXXXXXXXXXXXMEFARYENETEILR 182
ME+ARYE ETE+LR+ E R +E+ E + E +R
Sbjct: 522 EDKLEAQMEYARYEQETELLRQ-ELR----------KREVDNERKKLEWEMREKQAEEMR 570
Query: 183 EQLRQREADRERQKQEWELKERHAEEQRRCDEEAMRRQTEEIHLRMQQQD 232
+ R+ E R Q + R E+ R +E + + ++++ + QQ+
Sbjct: 571 K--REEETMRRHQTEMQSHMNRQEEDMLRRQQETLFMKAQQLNSLLDQQE 618
Score = 229 (85.7 bits), Expect = 4.7e-18, P = 4.7e-18
Identities = 42/79 (53%), Positives = 61/79 (77%)
Query: 169 MEFARYENETEILREQLRQREADRERQKQEWELKERHAEEQRRCDEEAMRRQTEEIHLRM 228
ME+ARYE ETE+LR++LR+RE D ER+K EWE++E+ AEE R+ +EE MRR E+ M
Sbjct: 529 MEYARYEQETELLRQELRKREVDNERKKLEWEMREKQAEEMRKREEETMRRHQTEMQSHM 588
Query: 229 QQQDEELRRRHQENSIFMQ 247
+Q+E++ RR QE ++FM+
Sbjct: 589 NRQEEDMLRRQQE-TLFMK 606
>ZFIN|ZDB-GENE-030131-9530 [details] [associations]
symbol:pspc1 "paraspeckle component 1"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0016363 "nuclear
matrix" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 ZFIN:ZDB-GENE-030131-9530 GO:GO:0005737 GO:GO:0005730
GO:GO:0006355 GO:GO:0000166 GO:GO:0016607 Gene3D:3.30.70.330
GO:GO:0006351 GO:GO:0003723 GO:GO:0016363 InterPro:IPR012975
Pfam:PF08075 eggNOG:NOG298586 GeneTree:ENSGT00390000005004
HOGENOM:HOG000231095 HOVERGEN:HBG009801 CTD:55269 OMA:DNREQEM
OrthoDB:EOG444KKN EMBL:BC116549 IPI:IPI00650514
RefSeq:NP_001038723.1 UniGene:Dr.75397 ProteinModelPortal:Q1JPY8
SMR:Q1JPY8 STRING:Q1JPY8 Ensembl:ENSDART00000102335 GeneID:692285
KEGG:dre:692285 InParanoid:Q1JPY8 NextBio:20902486
ArrayExpress:Q1JPY8 Bgee:Q1JPY8 Uniprot:Q1JPY8
Length = 512
Score = 287 (106.1 bits), Expect = 1.7e-31, Sum P(2) = 1.7e-31
Identities = 59/142 (41%), Positives = 82/142 (57%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
+ERA+V+VDDRG +GI+EF KPAA +AL C DG LT S +PVI+EP + DDE
Sbjct: 176 VERAIVIVDDRGRPTGKGIVEFANKPAARKALDHCADGALLLTTSPRPVILEPTEQYDDE 235
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXXX 122
+GL E+ + +KS+ Y K+R P FA G+FEFEY +RWK L
Sbjct: 236 DGLPEKLL-QKSAQYHKEREHKPHFAQPGTFEFEYSSRWKALDEMDKQQREQVERNIQEA 294
Query: 123 XXXXXXXMEFARYENETEILRE 144
ME A+ E++ ++R+
Sbjct: 295 KEKLETEMEAAKQEHQLMMMRQ 316
Score = 85 (35.0 bits), Expect = 1.7e-31, Sum P(2) = 1.7e-31
Identities = 32/114 (28%), Positives = 59/114 (51%)
Query: 169 MEFARYENETEILREQL--RQREADR--ERQKQEWELKE----RHAEEQRRCDEEAMRRQ 220
ME A+ E++ ++R+ L RQ E R E + QE + ++ RH EE+RR +E+ +R +
Sbjct: 302 MEAAKQEHQLMMMRQDLMRRQEELRRLEELRNQELQKRKQIELRHEEERRRREEDMIRHR 361
Query: 221 TEEIHLRMQQQDEE---LRRRHQE---NSIFMQVIVWLGDLKQGVYQLGLTEGP 268
E++ +R Q + + R Q+ N + + + +GD V + +GP
Sbjct: 362 -EQLDIRRQPDGFKSGFMESREQDMRMNEMGTRGAINIGDSFNPVTAISGNQGP 414
>FB|FBgn0015520 [details] [associations]
symbol:nonA-l "nonA-like" species:7227 "Drosophila
melanogaster" [GO:0003729 "mRNA binding" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008187 "poly-pyrimidine
tract binding" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 GO:GO:0003729
Gene3D:3.30.70.330 GO:GO:0005681 EMBL:U31961 GO:GO:0000398
GO:GO:0008187 InterPro:IPR012975 Pfam:PF08075 FlyBase:FBgn0015520
ProteinModelPortal:Q7JPC7 STRING:Q7JPC7 PRIDE:Q7JPC7
InParanoid:Q7JPC7 ArrayExpress:Q7JPC7 Bgee:Q7JPC7 Uniprot:Q7JPC7
Length = 642
Score = 351 (128.6 bits), Expect = 2.3e-31, P = 2.3e-31
Identities = 79/230 (34%), Positives = 127/230 (55%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
IERAV+ VDDRG EGI+EF +K +A+ L+ C + FFLT SL+P +VEP+++ +D
Sbjct: 376 IERAVICVDDRGKHTGEGIVEFAKKSSASACLRLCNEKCFFLTASLRPCLVEPMEVNNDN 435
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXXX 122
+GL ++T++KKS ++ +RS+GPRFA + SFE EYG+RWKQL+
Sbjct: 436 DGLPDKTLNKKSLEFRHERSVGPRFACLNSFEHEYGSRWKQLHDLFKSKQDSLKRELKME 495
Query: 123 XXXXXXXMEFARYENETEILRERECRFVXXXXXXXXXXXXXXXXXXMEFARYENETEILR 182
ME+ARYE ETE+LR+ E + +E+ E + E
Sbjct: 496 EDKLEAQMEYARYEQETELLRQ-ELK----------KRELDNERMKLEWEMREKQAE--- 541
Query: 183 EQLRQREADRERQKQEWELKERHAEEQRRCDEEAMRRQTEEIHLRMQQQD 232
++R+RE + + Q +L + + R E + Q +++++ + QQ+
Sbjct: 542 -EIRKREEEYMHRYQN-QLLRHEEDMRARQQENDLLMQAKKLNMILDQQE 589
Score = 203 (76.5 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 40/79 (50%), Positives = 57/79 (72%)
Query: 169 MEFARYENETEILREQLRQREADRERQKQEWELKERHAEEQRRCDEEAMRRQTEEIHLRM 228
ME+ARYE ETE+LR++L++RE D ER K EWE++E+ AEE R+ +EE M R ++ LR
Sbjct: 503 MEYARYEQETELLRQELKKRELDNERMKLEWEMREKQAEEIRKREEEYMHRYQNQL-LR- 560
Query: 229 QQQDEELRRRHQENSIFMQ 247
+E++R R QEN + MQ
Sbjct: 561 --HEEDMRARQQENDLLMQ 577
>UNIPROTKB|Q9GRX4 [details] [associations]
symbol:nonA "Protein no-on-transient A" species:47316
"Drosophila littoralis" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 GO:GO:0007601
Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0050896 InterPro:IPR012975
Pfam:PF08075 EMBL:AJ296178 ProteinModelPortal:Q9GRX4 PRIDE:Q9GRX4
FlyBase:FBgn0043410 Uniprot:Q9GRX4
Length = 698
Score = 345 (126.5 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 79/231 (34%), Positives = 122/231 (52%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
IERA + VDDRG EG +EF +K +A+ L+ C + FFLT SL+P +VEP+++ DD
Sbjct: 381 IERASITVDDRGKHLGEGTVEFAKKSSASACLRLCNEKCFFLTASLRPCLVEPMEVNDDN 440
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXXX 122
+GL E+ ++KK ++ ++RS+GPRFA + SFE EYG+RWKQL+
Sbjct: 441 DGLPEKALNKKLQEFNQERSVGPRFADLNSFEHEYGSRWKQLHDLFKSKQDALKRELKME 500
Query: 123 XXXXXXXMEFARYENETEILRERECRFVXXXXXXXXXXXXXXXXXXMEFARYENETEILR 182
ME+ARY ETE+ R+ E R +E+ E + E +R
Sbjct: 501 EEKLDAQMEYARYGQETELSRQ-ELR----------KRESDNERKKLEWEMREKQAEEMR 549
Query: 183 EQLRQREADRERQKQEWELKERHAEEQRRCDEE-AMRRQTEEIHLRMQQQD 232
+ R+ E R Q + R E+ RR +E + Q ++++ + QQ+
Sbjct: 550 K--REEETMRRHQTEMQSRMVRQEEDMRRRQQENTLFMQAQQLNSLLDQQE 598
Score = 246 (91.7 bits), Expect = 6.9e-20, P = 6.9e-20
Identities = 44/79 (55%), Positives = 63/79 (79%)
Query: 169 MEFARYENETEILREQLRQREADRERQKQEWELKERHAEEQRRCDEEAMRRQTEEIHLRM 228
ME+ARY ETE+ R++LR+RE+D ER+K EWE++E+ AEE R+ +EE MRR E+ RM
Sbjct: 508 MEYARYGQETELSRQELRKRESDNERKKLEWEMREKQAEEMRKREEETMRRHQTEMQSRM 567
Query: 229 QQQDEELRRRHQENSIFMQ 247
+Q+E++RRR QEN++FMQ
Sbjct: 568 VRQEEDMRRRQQENTLFMQ 586
>UNIPROTKB|F1N941 [details] [associations]
symbol:PSPC1 "Paraspeckle component 1" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0042382 "paraspeckles" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005730 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0042382 InterPro:IPR012975 Pfam:PF08075
GeneTree:ENSGT00390000005004 OMA:DNREQEM EMBL:AADN02005081
EMBL:AADN02005082 EMBL:AADN02005083 EMBL:AADN02005084
IPI:IPI00819057 Ensembl:ENSGALT00000036438 ArrayExpress:F1N941
Uniprot:F1N941
Length = 524
Score = 336 (123.3 bits), Expect = 3.7e-30, P = 3.7e-30
Identities = 75/211 (35%), Positives = 108/211 (51%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
+ERAVV+VDDRG + +G +EF KP A +AL+RC DG F LT + +PV+VEP++ DDE
Sbjct: 181 VERAVVVVDDRGRATGKGFVEFAAKPPARKALERCSDGAFLLTTTPRPVVVEPMEQFDDE 240
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXXX 122
+GL E+ + +K+ Y K+R PRFA G+FEFEY +RWK L
Sbjct: 241 DGLPEKLM-QKTQQYHKEREQPPRFAQPGTFEFEYASRWKALDEMEKQQREQVDRNIREA 299
Query: 123 XXXXXXXMEFARYENETEILREREC--RFVXXXXXXXXXXXXXXXXXXMEFARYENETEI 180
ME AR+E++ ++R+ C R V +E E
Sbjct: 300 KEKLEAEMEAARHEHQLMLMRQEVCKIRTVELRREEMINSKQLVVEYQIELKHEEEHRRR 359
Query: 181 LREQLRQREADRERQKQEWELKERHAEEQRR 211
E LRQRE + R++QE K + + +
Sbjct: 360 EEEMLRQREQEELRRQQEGGFKPNFMDNREQ 390
>UNIPROTKB|Q91017 [details] [associations]
symbol:SFPQ "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000380 "alternative mRNA
splicing, via spliceosome" evidence=IEA] [GO:0016363 "nuclear
matrix" evidence=IEA] [GO:0042382 "paraspeckles" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0016363 GO:GO:0000380 GO:GO:0042382 InterPro:IPR012975
Pfam:PF08075 eggNOG:NOG298586 GeneTree:ENSGT00390000005004
HOGENOM:HOG000231095 HOVERGEN:HBG009801 HSSP:O08583
OrthoDB:EOG4RNB8S EMBL:AADN02043825 EMBL:AADN02043826 EMBL:U35610
IPI:IPI00822812 PIR:S69282 UniGene:Gga.4684
Ensembl:ENSGALT00000040823 InParanoid:Q91017 Uniprot:Q91017
Length = 241
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 82/208 (39%), Positives = 115/208 (55%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
+ERAVV+VDDRG S +GI+EF KPAA +A +RC +GVF LT + +PVIVEPL+ +DDE
Sbjct: 50 VERAVVIVDDRGRSTGKGIVEFASKPAARKAFERCTEGVFLLTTTPRPVIVEPLEQLDDE 109
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXXX 122
+GL E+ +++K+ Y K+R PRFA GSFEFEY RWK L
Sbjct: 110 DGLPEK-LAQKNPMYQKERETPPRFAQPGSFEFEYSQRWKSLDEMEKQQREQVAKNMKDA 168
Query: 123 XXXXXXXMEFARYENETEILRERECRFVXXXXXXXXXXXXXXXXXXMEFARYENETEILR 182
ME A +E++ +LR+ R ME + E + +
Sbjct: 169 KDKLESEMEDAYHEHQANLLRQDLMR-------------RQEELRRME-ELHNQEMQKRK 214
Query: 183 E-QLRQREADRERQKQEWELKERHAEEQ 209
E QLRQ E +R R+++E +++R EEQ
Sbjct: 215 EIQLRQEE-ERRRREEEMMIRQREMEEQ 241
>UNIPROTKB|F1P555 [details] [associations]
symbol:SFPQ "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000380 "alternative mRNA
splicing, via spliceosome" evidence=IEA] [GO:0016363 "nuclear
matrix" evidence=IEA] [GO:0042382 "paraspeckles" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0016363 GO:GO:0000380 GO:GO:0042382 InterPro:IPR012975
Pfam:PF08075 GeneTree:ENSGT00390000005004 OMA:APGGHPK
EMBL:AADN02043825 EMBL:AADN02043826 IPI:IPI00574618
Ensembl:ENSGALT00000003963 ArrayExpress:F1P555 Uniprot:F1P555
Length = 647
Score = 337 (123.7 bits), Expect = 8.2e-30, P = 8.2e-30
Identities = 87/219 (39%), Positives = 120/219 (54%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
+ERAVV+VDDRG S +GI+EF KPAA +A +RC +GVF LT + +PVIVEPL+ +DDE
Sbjct: 337 VERAVVIVDDRGRSTGKGIVEFASKPAARKAFERCTEGVFLLTTTPRPVIVEPLEQLDDE 396
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXXX 122
+GL E+ +++K+ Y K+R PRFA GSFEFEY RWK L
Sbjct: 397 DGLPEK-LAQKNPMYQKERETPPRFAQPGSFEFEYSQRWKSLDEMEKQQREQVAKNMKDA 455
Query: 123 XXXXXXXMEFARYENETEILRERECRFVXXXXXXXXXXXXXXXXXXMEFARYENETEILR 182
ME A +E++ +LR+ R ME + E + +
Sbjct: 456 KDKLESEMEDAYHEHQANLLRQDLMR-------------RQEELRRME-ELHNQEMQKRK 501
Query: 183 E-QLRQREADRERQKQEWELKERHAEEQ-RRCDEEAMRR 219
E QLRQ E +R R+++E +++R EEQ RR EE R
Sbjct: 502 EIQLRQEE-ERRRREEEMMIRQREMEEQMRRQREENYSR 539
Score = 116 (45.9 bits), Expect = 0.00044, P = 0.00044
Identities = 28/76 (36%), Positives = 48/76 (63%)
Query: 169 MEFARYENETEILREQL--RQREADRERQKQEWELKERHAEEQRRCDEEAMRRQTEEIHL 226
ME A +E++ +LR+ L RQ E R + E+++R E Q R +EE RR+ EE+ +
Sbjct: 463 MEDAYHEHQANLLRQDLMRRQEELRRMEELHNQEMQKRK-EIQLRQEEERRRRE-EEMMI 520
Query: 227 RMQQQDEELRRRHQEN 242
R ++ +E++RR+ +EN
Sbjct: 521 RQREMEEQMRRQREEN 536
>UNIPROTKB|F1LQW3 [details] [associations]
symbol:Sfpq "Protein Sfpq" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000380 "alternative mRNA splicing, via spliceosome"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016363 "nuclear matrix" evidence=IEA] [GO:0042382
"paraspeckles" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:727923 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR012975 Pfam:PF08075
GeneTree:ENSGT00390000005004 IPI:IPI00627068 PRIDE:F1LQW3
Ensembl:ENSRNOT00000018049 Uniprot:F1LQW3
Length = 606
Score = 335 (123.0 bits), Expect = 1.1e-29, P = 1.1e-29
Identities = 86/219 (39%), Positives = 121/219 (55%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
IERAVV+VDDRG S +GI+EF KPAA +A +RC +GVF LT + +PVIVEPL+ +DDE
Sbjct: 296 IERAVVIVDDRGRSTGKGIVEFASKPAARKAFERCSEGVFLLTTTPRPVIVEPLEQLDDE 355
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXXX 122
+GL E+ +++K+ Y K+R PRFA G+FE+EY RWK L
Sbjct: 356 DGLPEK-LAQKNPMYQKERETPPRFAQHGTFEYEYSQRWKSLDEMEKQQREQVEKNMKDA 414
Query: 123 XXXXXXXMEFARYENETEILRERECRFVXXXXXXXXXXXXXXXXXXMEFARYENETEILR 182
ME A +E++ +LR+ R ME + E + +
Sbjct: 415 KDKLESEMEDAYHEHQANLLRQDLMR-------------RQEELRRME-ELHSQEMQKRK 460
Query: 183 E-QLRQREADRERQKQEWELKERHAEEQ-RRCDEEAMRR 219
E QLRQ E +R R+++E +++R EEQ RR EE+ R
Sbjct: 461 EMQLRQEE-ERRRREEEMMIRQREMEEQMRRQREESYSR 498
>UNIPROTKB|F1P7J0 [details] [associations]
symbol:SFPQ "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR012975
Pfam:PF08075 GeneTree:ENSGT00390000005004 OMA:APGGHPK
EMBL:AAEX03009659 EMBL:AAEX03009658 Ensembl:ENSCAFT00000005784
Uniprot:F1P7J0
Length = 659
Score = 335 (123.0 bits), Expect = 1.4e-29, P = 1.4e-29
Identities = 86/219 (39%), Positives = 121/219 (55%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
IERAVV+VDDRG S +GI+EF KPAA +A +RC +GVF LT + +PVIVEPL+ +DDE
Sbjct: 349 IERAVVIVDDRGRSTGKGIVEFASKPAARKAFERCSEGVFLLTTTPRPVIVEPLEQLDDE 408
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXXX 122
+GL E+ +++K+ Y K+R PRFA G+FE+EY RWK L
Sbjct: 409 DGLPEK-LAQKNPMYQKERETPPRFAQHGTFEYEYSQRWKSLDEMEKQQREQVEKNMKDA 467
Query: 123 XXXXXXXMEFARYENETEILRERECRFVXXXXXXXXXXXXXXXXXXMEFARYENETEILR 182
ME A +E++ +LR+ R ME + E + +
Sbjct: 468 KDKLESEMEDAYHEHQANLLRQDLMR-------------RQEELRRME-ELHNQEMQKRK 513
Query: 183 E-QLRQREADRERQKQEWELKERHAEEQ-RRCDEEAMRR 219
E QLRQ E +R R+++E +++R EEQ RR EE+ R
Sbjct: 514 EMQLRQEE-ERRRREEEMMIRQREMEEQMRRQREESYSR 551
>MGI|MGI:1918764 [details] [associations]
symbol:Sfpq "splicing factor proline/glutamine rich
(polypyrimidine tract binding protein associated)" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000380 "alternative mRNA
splicing, via spliceosome" evidence=ISO] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0016363 "nuclear matrix" evidence=ISO]
[GO:0042382 "paraspeckles" evidence=ISO] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
MGI:MGI:1918764 GO:GO:0005737 GO:GO:0006355 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 Gene3D:3.30.70.330 GO:GO:0006351
GO:GO:0003723 GO:GO:0016363 GO:GO:0000380 GO:GO:0042382
InterPro:IPR012975 Pfam:PF08075 eggNOG:NOG298586
GeneTree:ENSGT00390000005004 KO:K13219 HOGENOM:HOG000231095
HOVERGEN:HBG009801 CTD:6421 OMA:APGGHPK OrthoDB:EOG4RNB8S
ChiTaRS:SFPQ EMBL:AY034062 EMBL:AL606985 EMBL:BC089305
EMBL:AF272847 IPI:IPI00129430 RefSeq:NP_076092.1 UniGene:Mm.257276
UniGene:Mm.482296 ProteinModelPortal:Q8VIJ6 SMR:Q8VIJ6
IntAct:Q8VIJ6 STRING:Q8VIJ6 PhosphoSite:Q8VIJ6
REPRODUCTION-2DPAGE:Q8VIJ6 PaxDb:Q8VIJ6 PRIDE:Q8VIJ6
Ensembl:ENSMUST00000030623 GeneID:71514 KEGG:mmu:71514
UCSC:uc008utz.2 InParanoid:A2A7U6 NextBio:333919 Bgee:Q8VIJ6
Genevestigator:Q8VIJ6 GermOnline:ENSMUSG00000028820 Uniprot:Q8VIJ6
Length = 699
Score = 335 (123.0 bits), Expect = 1.7e-29, P = 1.7e-29
Identities = 86/219 (39%), Positives = 121/219 (55%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
IERAVV+VDDRG S +GI+EF KPAA +A +RC +GVF LT + +PVIVEPL+ +DDE
Sbjct: 389 IERAVVIVDDRGRSTGKGIVEFASKPAARKAFERCSEGVFLLTTTPRPVIVEPLEQLDDE 448
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXXX 122
+GL E+ +++K+ Y K+R PRFA G+FE+EY RWK L
Sbjct: 449 DGLPEK-LAQKNPMYQKERETPPRFAQHGTFEYEYSQRWKSLDEMEKQQREQVEKNMKDA 507
Query: 123 XXXXXXXMEFARYENETEILRERECRFVXXXXXXXXXXXXXXXXXXMEFARYENETEILR 182
ME A +E++ +LR+ R ME + E + +
Sbjct: 508 KDKLESEMEDAYHEHQANLLRQDLMR-------------RQEELRRME-ELHSQEMQKRK 553
Query: 183 E-QLRQREADRERQKQEWELKERHAEEQ-RRCDEEAMRR 219
E QLRQ E +R R+++E +++R EEQ RR EE+ R
Sbjct: 554 EMQLRQEE-ERRRREEEMMIRQREMEEQMRRQREESYSR 591
>RGD|727923 [details] [associations]
symbol:Sfpq "splicing factor proline/glutamine-rich"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000380 "alternative mRNA splicing, via spliceosome"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0016363
"nuclear matrix" evidence=ISO] [GO:0042382 "paraspeckles"
evidence=ISO] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 RGD:727923 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR012975 Pfam:PF08075
KO:K13219 HOGENOM:HOG000231095 HOVERGEN:HBG009801 CTD:6421
OrthoDB:EOG4RNB8S IPI:IPI00627068 EMBL:BC098731
RefSeq:NP_001020442.1 UniGene:Rn.54645 ProteinModelPortal:Q4KM71
SMR:Q4KM71 STRING:Q4KM71 PhosphoSite:Q4KM71 PRIDE:Q4KM71
GeneID:252855 KEGG:rno:252855 UCSC:RGD:727923 InParanoid:Q4KM71
NextBio:623920 ArrayExpress:Q4KM71 Genevestigator:Q4KM71
Uniprot:Q4KM71
Length = 699
Score = 335 (123.0 bits), Expect = 1.7e-29, P = 1.7e-29
Identities = 86/219 (39%), Positives = 121/219 (55%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
IERAVV+VDDRG S +GI+EF KPAA +A +RC +GVF LT + +PVIVEPL+ +DDE
Sbjct: 389 IERAVVIVDDRGRSTGKGIVEFASKPAARKAFERCSEGVFLLTTTPRPVIVEPLEQLDDE 448
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXXX 122
+GL E+ +++K+ Y K+R PRFA G+FE+EY RWK L
Sbjct: 449 DGLPEK-LAQKNPMYQKERETPPRFAQHGTFEYEYSQRWKSLDEMEKQQREQVEKNMKDA 507
Query: 123 XXXXXXXMEFARYENETEILRERECRFVXXXXXXXXXXXXXXXXXXMEFARYENETEILR 182
ME A +E++ +LR+ R ME + E + +
Sbjct: 508 KDKLESEMEDAYHEHQANLLRQDLMR-------------RQEELRRME-ELHSQEMQKRK 553
Query: 183 E-QLRQREADRERQKQEWELKERHAEEQ-RRCDEEAMRR 219
E QLRQ E +R R+++E +++R EEQ RR EE+ R
Sbjct: 554 EMQLRQEE-ERRRREEEMMIRQREMEEQMRRQREESYSR 591
>UNIPROTKB|E1BQ37 [details] [associations]
symbol:SFPQ "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042382 "paraspeckles" evidence=IEA] [GO:0016363
"nuclear matrix" evidence=IEA] [GO:0000380 "alternative mRNA
splicing, via spliceosome" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0016363 GO:GO:0000380 GO:GO:0042382
InterPro:IPR012975 Pfam:PF08075 GeneTree:ENSGT00390000005004
KO:K13219 CTD:6421 OMA:APGGHPK EMBL:DAAA02009211 IPI:IPI00688960
RefSeq:NP_001193220.1 UniGene:Bt.59171 ProteinModelPortal:E1BQ37
Ensembl:ENSBTAT00000021719 GeneID:618226 KEGG:bta:618226
NextBio:20901069 Uniprot:E1BQ37
Length = 707
Score = 335 (123.0 bits), Expect = 1.8e-29, P = 1.8e-29
Identities = 86/219 (39%), Positives = 121/219 (55%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
IERAVV+VDDRG S +GI+EF KPAA +A +RC +GVF LT + +PVIVEPL+ +DDE
Sbjct: 397 IERAVVIVDDRGRSTGKGIVEFASKPAARKAFERCSEGVFLLTTTPRPVIVEPLEQLDDE 456
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXXX 122
+GL E+ +++K+ Y K+R PRFA G+FE+EY RWK L
Sbjct: 457 DGLPEK-LAQKNPMYQKERETPPRFAQHGTFEYEYSQRWKSLDEMEKQQREQVEKNMKDA 515
Query: 123 XXXXXXXMEFARYENETEILRERECRFVXXXXXXXXXXXXXXXXXXMEFARYENETEILR 182
ME A +E++ +LR+ R ME + E + +
Sbjct: 516 KDKLESEMEDAYHEHQANLLRQDLMR-------------RQEELRRME-ELHNQEMQKRK 561
Query: 183 E-QLRQREADRERQKQEWELKERHAEEQ-RRCDEEAMRR 219
E QLRQ E +R R+++E +++R EEQ RR EE+ R
Sbjct: 562 EMQLRQEE-ERRRREEEMMIRQREMEEQMRRQREESYSR 599
>UNIPROTKB|P23246 [details] [associations]
symbol:SFPQ "Splicing factor, proline- and glutamine-rich"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0006397
"mRNA processing" evidence=TAS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0016363 "nuclear matrix" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0042382 "paraspeckles"
evidence=IDA] [GO:0000380 "alternative mRNA splicing, via
spliceosome" evidence=IMP] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
GO:GO:0000166 GO:GO:0003677 EMBL:CH471059 GO:GO:0006281
Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723 GO:GO:0000122
GO:GO:0006310 GO:GO:0016363 GO:GO:0000380 GO:GO:0042382
InterPro:IPR012975 Pfam:PF08075 eggNOG:NOG298586 KO:K13219
HOGENOM:HOG000231095 HOVERGEN:HBG009801 EMBL:X70944 EMBL:AL590434
EMBL:X16850 IPI:IPI00010740 IPI:IPI00216613 PIR:A46302 PIR:S29770
RefSeq:NP_005057.1 UniGene:Hs.355934 UniGene:Hs.611911
ProteinModelPortal:P23246 SMR:P23246 IntAct:P23246
MINT:MINT-1141893 STRING:P23246 PhosphoSite:P23246 DMDM:1709851
SWISS-2DPAGE:P23246 PaxDb:P23246 PeptideAtlas:P23246 PRIDE:P23246
Ensembl:ENST00000357214 GeneID:6421 KEGG:hsa:6421 UCSC:uc001bys.3
CTD:6421 GeneCards:GC01M035641 HGNC:HGNC:10774 HPA:CAB009886
MIM:605199 neXtProt:NX_P23246 PharmGKB:PA35690 InParanoid:P23246
OMA:APGGHPK OrthoDB:EOG4RNB8S PhylomeDB:P23246 ChiTaRS:SFPQ
GenomeRNAi:6421 NextBio:24935 ArrayExpress:P23246 Bgee:P23246
CleanEx:HS_SFPQ Genevestigator:P23246 GermOnline:ENSG00000116560
Uniprot:P23246
Length = 707
Score = 335 (123.0 bits), Expect = 1.8e-29, P = 1.8e-29
Identities = 86/219 (39%), Positives = 121/219 (55%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
IERAVV+VDDRG S +GI+EF KPAA +A +RC +GVF LT + +PVIVEPL+ +DDE
Sbjct: 397 IERAVVIVDDRGRSTGKGIVEFASKPAARKAFERCSEGVFLLTTTPRPVIVEPLEQLDDE 456
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXXX 122
+GL E+ +++K+ Y K+R PRFA G+FE+EY RWK L
Sbjct: 457 DGLPEK-LAQKNPMYQKERETPPRFAQHGTFEYEYSQRWKSLDEMEKQQREQVEKNMKDA 515
Query: 123 XXXXXXXMEFARYENETEILRERECRFVXXXXXXXXXXXXXXXXXXMEFARYENETEILR 182
ME A +E++ +LR+ R ME + E + +
Sbjct: 516 KDKLESEMEDAYHEHQANLLRQDLMR-------------RQEELRRME-ELHNQEMQKRK 561
Query: 183 E-QLRQREADRERQKQEWELKERHAEEQ-RRCDEEAMRR 219
E QLRQ E +R R+++E +++R EEQ RR EE+ R
Sbjct: 562 EMQLRQEE-ERRRREEEMMIRQREMEEQMRRQREESYSR 599
>UNIPROTKB|Q5ZIZ5 [details] [associations]
symbol:NONO "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0042382 "paraspeckles" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0016363
GO:GO:0042382 InterPro:IPR012975 Pfam:PF08075 eggNOG:NOG298586
GeneTree:ENSGT00390000005004 CTD:4841 HOGENOM:HOG000231095
HOVERGEN:HBG009801 KO:K13214 OMA:NQQYHKE OrthoDB:EOG4ZCT50
EMBL:AADN02013229 EMBL:AADN02013230 EMBL:AJ720639 IPI:IPI00603370
RefSeq:NP_001026703.1 UniGene:Gga.4549 SMR:Q5ZIZ5
Ensembl:ENSGALT00000008838 GeneID:428701 KEGG:gga:428701
InParanoid:Q5ZIZ5 NextBio:20829624 Uniprot:Q5ZIZ5
Length = 473
Score = 323 (118.8 bits), Expect = 4.6e-29, P = 4.6e-29
Identities = 75/196 (38%), Positives = 101/196 (51%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
+ERAVV+VDDRG S +GI+EF+ KPAA +AL RC DG F LT +PV VEP+D DDE
Sbjct: 174 VERAVVIVDDRGRSSGKGIVEFSGKPAARKALDRCSDGSFLLTTFPRPVTVEPMDQYDDE 233
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXXX 122
EGL E+ V K + Y K+R PRFA GSFE+EY RWK L
Sbjct: 234 EGLPEKLVIK-NQQYHKEREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQEQVDRNIKEA 292
Query: 123 XXXXXXXMEFARYENETEILRERECRFVXXXXXXXXXXXXXXXXXXMEFARYENETEILR 182
ME AR+E++ ++R+ R R E E
Sbjct: 293 REKLEMEMEAARHEHQVMLMRQDLMRRQEELRRMEELHNQEVQKRKQLEIRQEEERRRRE 352
Query: 183 EQLRQREADRERQKQE 198
E++R+++ + R++QE
Sbjct: 353 EEMRRQQEEMMRRQQE 368
>UNIPROTKB|Q5ZK88 [details] [associations]
symbol:PSPC1 "Paraspeckle component 1" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016363
"nuclear matrix" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005737 GO:GO:0005730
GO:GO:0006355 GO:GO:0000166 GO:GO:0016607 Gene3D:3.30.70.330
GO:GO:0006351 GO:GO:0003723 GO:GO:0016363 InterPro:IPR012975
Pfam:PF08075 eggNOG:NOG298586 HOGENOM:HOG000231095
HOVERGEN:HBG009801 CTD:55269 OrthoDB:EOG444KKN EMBL:AJ720196
IPI:IPI00584056 RefSeq:NP_001026002.1 UniGene:Gga.4178 HSSP:Q99K48
ProteinModelPortal:Q5ZK88 SMR:Q5ZK88 PRIDE:Q5ZK88 GeneID:418955
KEGG:gga:418955 InParanoid:Q5ZK88 NextBio:20822076 Uniprot:Q5ZK88
Length = 523
Score = 321 (118.1 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 74/210 (35%), Positives = 108/210 (51%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
+ERAVV+VDDRG + +G +EF KP A +AL+RC DG F LT + +PV+VEP++ DDE
Sbjct: 181 VERAVVVVDDRGRATGKGFVEFAAKPPARKALERCSDGAFLLTTTPRPVVVEPMEQFDDE 240
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXXX 122
+GL E+ + +K+ Y K+R PRFA G+FEFEY +RWK L
Sbjct: 241 DGLPEKLM-QKTQQYHKEREQPPRFAQPGTFEFEYASRWKALDEMEKQQREQVDRNIREA 299
Query: 123 XXXXXXXMEFARYENETEILRERECRFVXXXXXXXXXXXXXXXXXXMEFARYENETEILR 182
ME AR+E++ ++R+ R R+E E
Sbjct: 300 KEKLEAEMEAARHEHQLMLMRQDLMRRQEELRRLEELRNQELQKRKQIQLRHEEEHRRRE 359
Query: 183 EQ-LRQREADRERQKQEWELKERHAEEQRR 211
E+ LRQRE + R++QE K + + +
Sbjct: 360 EEMLRQREQEELRRQQEGGFKPNFMDNREQ 389
>UNIPROTKB|E1C0S2 [details] [associations]
symbol:PSPC1 "Paraspeckle component 1" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR012975
Pfam:PF08075 GeneTree:ENSGT00390000005004 IPI:IPI00584056
EMBL:AADN02005081 EMBL:AADN02005082 EMBL:AADN02005083
EMBL:AADN02005084 Ensembl:ENSGALT00000027687 ArrayExpress:E1C0S2
Uniprot:E1C0S2
Length = 523
Score = 317 (116.6 bits), Expect = 5.3e-28, P = 5.3e-28
Identities = 72/212 (33%), Positives = 107/212 (50%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
+ERAVV+VDDRG + +G +EF KP A +AL+RC DG F LT + +PV+VEP++ DDE
Sbjct: 181 VERAVVVVDDRGRATGKGFVEFAAKPPARKALERCSDGAFLLTTTPRPVVVEPMEQFDDE 240
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXXX 122
+GL E+ + +K+ Y K+R PRFA G+FEFEY +RWK L
Sbjct: 241 DGLPEKLM-QKTQQYHKEREQPPRFAQPGTFEFEYASRWKALDEMEKQQREQVDRNIREA 299
Query: 123 XXXXXXXMEFARYENETEILRER---ECRFVXXXXXXXXXXXXXXXXXXMEFARYENETE 179
ME AR+E++ ++R+ C + ++ E
Sbjct: 300 KEKLEAEMEAARHEHQLMLMRQEISGRCYLIKCIEPKQRKKLVPYTVLKIKHEEEHRRRE 359
Query: 180 ILREQLRQREADRERQKQEWELKERHAEEQRR 211
E LRQRE + R++QE K + + +
Sbjct: 360 --EEMLRQREQEELRRQQEGGFKPNFMDNREQ 389
>UNIPROTKB|H7C367 [details] [associations]
symbol:NONO "Non-POU domain-containing octamer-binding
protein" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
InterPro:IPR012975 Pfam:PF08075 EMBL:AL590762 HGNC:HGNC:7871
ProteinModelPortal:H7C367 PRIDE:H7C367 Ensembl:ENST00000418921
Uniprot:H7C367
Length = 235
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 72/196 (36%), Positives = 101/196 (51%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
+ERAVV+VDDRG +GI+EF+ KPAA +AL RC +G F LT +PV VEP+D +DDE
Sbjct: 36 VERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLTTFPRPVTVEPMDQLDDE 95
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXXX 122
EGL E+ V K + + K+R PRFA GSFE+EY RWK L
Sbjct: 96 EGLPEKLVIK-NQQFHKEREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQDQVDRNIKEA 154
Query: 123 XXXXXXXMEFARYENETEILRERECRFVXXXXXXXXXXXXXXXXXXMEFARYENETEILR 182
ME AR+E++ ++R+ R R E E
Sbjct: 155 REKLEMEMEAARHEHQVMLMRQDLMRRQEELRRMEELHNQEVQKRKQLELRQEEERRRRE 214
Query: 183 EQLRQREADRERQKQE 198
E++R+++ + R++QE
Sbjct: 215 EEMRRQQEEMMRRQQE 230
>MGI|MGI:1913895 [details] [associations]
symbol:Pspc1 "paraspeckle protein 1" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0042382 "paraspeckles" evidence=IDA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
MGI:MGI:1913895 GO:GO:0005737 GO:GO:0005730 GO:GO:0006355
GO:GO:0000166 GO:GO:0016607 Gene3D:3.30.70.330 GO:GO:0006351
GO:GO:0003723 GO:GO:0016363 GO:GO:0042382 InterPro:IPR012975
Pfam:PF08075 eggNOG:NOG298586 GeneTree:ENSGT00390000005004
HOGENOM:HOG000231095 HOVERGEN:HBG009801 CTD:55269 OMA:DNREQEM
OrthoDB:EOG444KKN HSSP:Q99K48 ChiTaRS:PSPC1 EMBL:AK011272
EMBL:AK017689 EMBL:AK150823 EMBL:AK160722 EMBL:BC026772
IPI:IPI00321266 IPI:IPI00857897 RefSeq:NP_079958.3 UniGene:Mm.20129
ProteinModelPortal:Q8R326 SMR:Q8R326 IntAct:Q8R326 MINT:MINT-218330
STRING:Q8R326 PhosphoSite:Q8R326 PaxDb:Q8R326 PRIDE:Q8R326
Ensembl:ENSMUST00000022507 Ensembl:ENSMUST00000163924 GeneID:66645
KEGG:mmu:66645 UCSC:uc007ucj.1 UCSC:uc007uck.1 InParanoid:Q8R326
NextBio:322261 Bgee:Q8R326 CleanEx:MM_PSPC1 Genevestigator:Q8R326
Uniprot:Q8R326
Length = 523
Score = 316 (116.3 bits), Expect = 6.8e-28, P = 6.8e-28
Identities = 73/210 (34%), Positives = 108/210 (51%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
+E+AVV+VDDRG + +G +EF KP A +AL+RC DG F LT + +PVIVEP++ DDE
Sbjct: 181 VEKAVVVVDDRGRATGKGFVEFAAKPPARKALERCGDGAFLLTTTPRPVIVEPMEQFDDE 240
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXXX 122
+GL E+ + +K+ Y K+R PRFA G+FEFEY +RWK L
Sbjct: 241 DGLPEKLM-QKTQQYHKEREQPPRFAQPGTFEFEYASRWKALDEMEKQQREQVDRNIREA 299
Query: 123 XXXXXXXMEFARYENETEILRERECRFVXXXXXXXXXXXXXXXXXXMEFARYENETEILR 182
ME AR+E++ ++R+ R R+E E
Sbjct: 300 KEKLEAEMEAARHEHQLMLMRQDLMRRQEELRRLEELRNQELQKRKQIQLRHEEEHRRRE 359
Query: 183 EQL-RQREADRERQKQEWELKERHAEEQRR 211
E++ R RE + R++QE K + E + +
Sbjct: 360 EEMIRHREQEELRRQQEGGFKPNYMENREQ 389
>UNIPROTKB|J9P3Z0 [details] [associations]
symbol:J9P3Z0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR012975
Pfam:PF08075 GeneTree:ENSGT00390000005004 EMBL:AAEX03009341
Ensembl:ENSCAFT00000046015 Uniprot:J9P3Z0
Length = 410
Score = 250 (93.1 bits), Expect = 6.9e-28, Sum P(2) = 6.9e-28
Identities = 58/142 (40%), Positives = 81/142 (57%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
+ERAVV++DDRG +GI+EF+ KPAA +AL C++G F LT +PV VEP+D +DDE
Sbjct: 166 MERAVVIMDDRGRPSGKGIVEFSGKPAAWKALD-CREGSFLLTTFPRPVTVEPMDQLDDE 224
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXXX 122
EGL E+ V K + + K+R P FA GSFE+E WK L
Sbjct: 225 EGLPEKLVIK-NQQFHKEREQPPSFAQPGSFEYEDAMCWKALIEMEKQQQGRVDHNIKEA 283
Query: 123 XXXXXXXMEFARYENETEILRE 144
ME AR+E++ ++R+
Sbjct: 284 REEEME-MEAARHEHQVMLMRQ 304
Score = 83 (34.3 bits), Expect = 6.9e-28, Sum P(2) = 6.9e-28
Identities = 23/66 (34%), Positives = 38/66 (57%)
Query: 169 MEFARYENETEILREQL-RQREADRERQKQEWELKERHAEEQRRCDEEAMRRQTEEIHLR 227
ME AR+E++ ++R+ L R++E R + E+++R R+ +E R Q EE+
Sbjct: 290 MEAARHEHQVMLMRQDLMRRQELRRMEELHNQEVQKRKQLVLRQEEERRHREQQEEM--- 346
Query: 228 MQQQDE 233
MQQQ E
Sbjct: 347 MQQQQE 352
>UNIPROTKB|Q2KJ42 [details] [associations]
symbol:NONO "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042802 "identical protein binding" evidence=ISS]
[GO:0042382 "paraspeckles" evidence=IEA] [GO:0016363 "nuclear
matrix" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0042802 GO:GO:0016363 GO:GO:0042382 InterPro:IPR012975
Pfam:PF08075 eggNOG:NOG298586 GeneTree:ENSGT00390000005004 CTD:4841
HOGENOM:HOG000231095 HOVERGEN:HBG009801 KO:K13214 OrthoDB:EOG4ZCT50
EMBL:DAAA02072840 EMBL:BC105532 IPI:IPI00699994
RefSeq:NP_001040019.1 UniGene:Bt.37860 SMR:Q2KJ42
Ensembl:ENSBTAT00000016122 GeneID:615175 KEGG:bta:615175
InParanoid:Q2KJ42 NextBio:20899485 Uniprot:Q2KJ42
Length = 470
Score = 312 (114.9 bits), Expect = 9.0e-28, P = 9.0e-28
Identities = 72/196 (36%), Positives = 101/196 (51%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
+ERAVV+VDDRG +GI+EF+ KPAA +AL RC +G F LT +PV VEP+D +DDE
Sbjct: 173 VERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLTTFPRPVTVEPMDQLDDE 232
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXXX 122
EGL E+ V K + + K+R PRFA GSFE+EY RWK L
Sbjct: 233 EGLPEKLVIK-NQQFHKEREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQDQVDRNIKEA 291
Query: 123 XXXXXXXMEFARYENETEILRERECRFVXXXXXXXXXXXXXXXXXXMEFARYENETEILR 182
ME AR+E++ ++R+ R R E E
Sbjct: 292 REKLEMEMEAARHEHQVMLMRQDLMRRQEELRRMEELHNQEVQKRKQLELRQEEERRRRE 351
Query: 183 EQLRQREADRERQKQE 198
E++R+++ + R++QE
Sbjct: 352 EEMRRQQEEMMRRQQE 367
>UNIPROTKB|F1PTP3 [details] [associations]
symbol:NONO "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR012975
Pfam:PF08075 GeneTree:ENSGT00390000005004 CTD:4841 KO:K13214
OMA:NQQYHKE EMBL:AAEX03026487 RefSeq:XP_849110.1
ProteinModelPortal:F1PTP3 Ensembl:ENSCAFT00000027037 GeneID:612773
KEGG:cfa:612773 Uniprot:F1PTP3
Length = 470
Score = 312 (114.9 bits), Expect = 9.0e-28, P = 9.0e-28
Identities = 72/196 (36%), Positives = 101/196 (51%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
+ERAVV+VDDRG +GI+EF+ KPAA +AL RC +G F LT +PV VEP+D +DDE
Sbjct: 173 VERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLTTFPRPVTVEPMDQLDDE 232
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXXX 122
EGL E+ V K + + K+R PRFA GSFE+EY RWK L
Sbjct: 233 EGLPEKLVIK-NQQFHKEREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQDQVDRNIKEA 291
Query: 123 XXXXXXXMEFARYENETEILRERECRFVXXXXXXXXXXXXXXXXXXMEFARYENETEILR 182
ME AR+E++ ++R+ R R E E
Sbjct: 292 REKLEMEMEAARHEHQVMLMRQDLMRRQEELRRMEELHNQEVQKRKQLELRQEEERRRRE 351
Query: 183 EQLRQREADRERQKQE 198
E++R+++ + R++QE
Sbjct: 352 EEMRRQQEEMMRRQQE 367
>UNIPROTKB|Q15233 [details] [associations]
symbol:NONO "Non-POU domain-containing octamer-binding
protein" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0042382 "paraspeckles"
evidence=IDA] [GO:0005634 "nucleus" evidence=TAS] [GO:0042802
"identical protein binding" evidence=IPI] [GO:0016363 "nuclear
matrix" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005730
GO:GO:0006355 GO:GO:0008380 GO:GO:0000166 GO:GO:0003677
GO:GO:0016607 GO:GO:0006281 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0006351 GO:GO:0003723 GO:GO:0006310 GO:GO:0016363
EMBL:CH471132 Pathway_Interaction_DB:circadianpathway GO:GO:0042382
InterPro:IPR012975 Pfam:PF08075 eggNOG:NOG298586 EMBL:L14599
EMBL:U89867 EMBL:Y11289 EMBL:Y11290 EMBL:Y11291 EMBL:Y11292
EMBL:Y11293 EMBL:Y11294 EMBL:Y11295 EMBL:Y11296 EMBL:Y11297
EMBL:Y11298 EMBL:U02493 EMBL:AK297144 EMBL:CR456761 EMBL:AL590762
EMBL:BC002364 EMBL:BC003129 EMBL:BC012141 EMBL:BC028299
EMBL:BC069616 EMBL:BC069639 IPI:IPI00304596 IPI:IPI00922367
PIR:G01211 PIR:S29769 PIR:S41768 RefSeq:NP_001138880.1
RefSeq:NP_001138881.1 RefSeq:NP_001138882.1 RefSeq:NP_031389.3
UniGene:Hs.533282 UniGene:Hs.700344 PDB:3SDE PDBsum:3SDE
ProteinModelPortal:Q15233 SMR:Q15233 DIP:DIP-29951N IntAct:Q15233
MINT:MINT-1131452 STRING:Q15233 PhosphoSite:Q15233 DMDM:67469924
REPRODUCTION-2DPAGE:IPI00304596 SWISS-2DPAGE:Q15233 PaxDb:Q15233
PeptideAtlas:Q15233 PRIDE:Q15233 DNASU:4841 Ensembl:ENST00000276079
Ensembl:ENST00000373841 Ensembl:ENST00000373856
Ensembl:ENST00000535149 GeneID:4841 KEGG:hsa:4841 UCSC:uc004dzn.3
CTD:4841 GeneCards:GC0XP070503 HGNC:HGNC:7871 HPA:CAB022069
MIM:300084 neXtProt:NX_Q15233 PharmGKB:PA31680 HOGENOM:HOG000231095
HOVERGEN:HBG009801 InParanoid:Q15233 KO:K13214 OMA:NQQYHKE
OrthoDB:EOG4ZCT50 PhylomeDB:Q15233 GenomeRNAi:4841 NextBio:18654
PMAP-CutDB:Q15233 ArrayExpress:Q15233 Bgee:Q15233 CleanEx:HS_NONO
Genevestigator:Q15233 GermOnline:ENSG00000147140 Uniprot:Q15233
Length = 471
Score = 312 (114.9 bits), Expect = 9.2e-28, P = 9.2e-28
Identities = 72/196 (36%), Positives = 101/196 (51%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
+ERAVV+VDDRG +GI+EF+ KPAA +AL RC +G F LT +PV VEP+D +DDE
Sbjct: 174 VERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLTTFPRPVTVEPMDQLDDE 233
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXXX 122
EGL E+ V K + + K+R PRFA GSFE+EY RWK L
Sbjct: 234 EGLPEKLVIK-NQQFHKEREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQDQVDRNIKEA 292
Query: 123 XXXXXXXMEFARYENETEILRERECRFVXXXXXXXXXXXXXXXXXXMEFARYENETEILR 182
ME AR+E++ ++R+ R R E E
Sbjct: 293 REKLEMEMEAARHEHQVMLMRQDLMRRQEELRRMEELHNQEVQKRKQLELRQEEERRRRE 352
Query: 183 EQLRQREADRERQKQE 198
E++R+++ + R++QE
Sbjct: 353 EEMRRQQEEMMRRQQE 368
>UNIPROTKB|I3LSU1 [details] [associations]
symbol:NONO "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0042382 "paraspeckles" evidence=IEA] [GO:0016363 "nuclear
matrix" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0016363 GO:GO:0042382 InterPro:IPR012975 Pfam:PF08075
GeneTree:ENSGT00390000005004 OMA:NQQYHKE Ensembl:ENSSSCT00000031783
Uniprot:I3LSU1
Length = 471
Score = 312 (114.9 bits), Expect = 9.2e-28, P = 9.2e-28
Identities = 72/196 (36%), Positives = 101/196 (51%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
+ERAVV+VDDRG +GI+EF+ KPAA +AL RC +G F LT +PV VEP+D +DDE
Sbjct: 174 VERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLTTFPRPVTVEPMDQLDDE 233
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXXX 122
EGL E+ V K + + K+R PRFA GSFE+EY RWK L
Sbjct: 234 EGLPEKLVIK-NQQFHKEREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQDQVDRNIKEA 292
Query: 123 XXXXXXXMEFARYENETEILRERECRFVXXXXXXXXXXXXXXXXXXMEFARYENETEILR 182
ME AR+E++ ++R+ R R E E
Sbjct: 293 REKLEMEMEAARHEHQVMLMRQDLMRRQEELRRMEELHNQEVQKRKQLELRQEEERRRRE 352
Query: 183 EQLRQREADRERQKQE 198
E++R+++ + R++QE
Sbjct: 353 EEMRRQQEEMMRRQQE 368
>UNIPROTKB|F1RN28 [details] [associations]
symbol:PSPC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042382 "paraspeckles" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005730 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0042382 InterPro:IPR012975 Pfam:PF08075
GeneTree:ENSGT00390000005004 OMA:DNREQEM EMBL:CU928808
Ensembl:ENSSSCT00000010490 Uniprot:F1RN28
Length = 460
Score = 311 (114.5 bits), Expect = 9.3e-28, P = 9.3e-28
Identities = 78/230 (33%), Positives = 116/230 (50%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
+E+AVV+VDDRG + +G +EF KP A +AL+RC DG F LT + +PVIVEP++ DDE
Sbjct: 180 VEKAVVVVDDRGRATGKGFVEFAAKPPARKALERCGDGAFLLTTTPRPVIVEPMEQFDDE 239
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXXX 122
+GL E+ + +K+ Y K+R PRFA G+FEFEY +RWK L
Sbjct: 240 DGLPEKLM-QKTQQYHKEREQPPRFAQPGTFEFEYASRWKALDEMEKQQREQVDRNIREA 298
Query: 123 XXXXXXXMEFARYENETEILRERECRFVXXXXXXXXXXXXXXXXXXMEFARYENETEILR 182
ME AR+E++ ++R+ R +E R N+ R
Sbjct: 299 KEKLEAEMEAARHEHQLMLMRQDLMR-------------RQEELRRLEELR--NQELQKR 343
Query: 183 EQLRQREADRERQKQEWELKERHAEEQRRCDEEAMRRQTEEIHLRMQQQD 232
+Q++ R + R+++E ++ R EE RR E E M+ D
Sbjct: 344 KQIQLRHEEEHRRREEEMIRHREQEELRRQQEGFKPNYMENREQEMRMGD 393
>MGI|MGI:1855692 [details] [associations]
symbol:Nono "non-POU-domain-containing, octamer binding
protein" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016363 "nuclear
matrix" evidence=ISO] [GO:0042382 "paraspeckles" evidence=ISO]
[GO:0042802 "identical protein binding" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 MGI:MGI:1855692 GO:GO:0005730 GO:GO:0006355
GO:GO:0008380 GO:GO:0000166 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0006351
GO:GO:0003723 GO:GO:0006310 GO:GO:0016363 GO:GO:0042382
InterPro:IPR012975 Pfam:PF08075 eggNOG:NOG298586
GeneTree:ENSGT00390000005004 CTD:4841 HOVERGEN:HBG009801 KO:K13214
OrthoDB:EOG4ZCT50 EMBL:S64860 EMBL:AK004830 EMBL:AK013444
EMBL:AK028338 EMBL:BC005465 EMBL:BC083074 IPI:IPI00320016
IPI:IPI00471251 RefSeq:NP_001239447.1 RefSeq:NP_075633.2
UniGene:Mm.280069 PDB:2CPJ PDB:2RS8 PDBsum:2CPJ PDBsum:2RS8
ProteinModelPortal:Q99K48 SMR:Q99K48 IntAct:Q99K48 STRING:Q99K48
PhosphoSite:Q99K48 PaxDb:Q99K48 PRIDE:Q99K48
Ensembl:ENSMUST00000033673 GeneID:53610 KEGG:mmu:53610
UCSC:uc009txr.2 InParanoid:Q99K48 ChiTaRS:NONO
EvolutionaryTrace:Q99K48 NextBio:310319 Bgee:Q99K48
Genevestigator:Q99K48 GermOnline:ENSMUSG00000031311 Uniprot:Q99K48
Length = 473
Score = 312 (114.9 bits), Expect = 9.6e-28, P = 9.6e-28
Identities = 72/196 (36%), Positives = 101/196 (51%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
+ERAVV+VDDRG +GI+EF+ KPAA +AL RC +G F LT +PV VEP+D +DDE
Sbjct: 176 VERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLTTFPRPVTVEPMDQLDDE 235
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXXX 122
EGL E+ V K + + K+R PRFA GSFE+EY RWK L
Sbjct: 236 EGLPEKLVIK-NQQFHKEREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQDQVDRNIKEA 294
Query: 123 XXXXXXXMEFARYENETEILRERECRFVXXXXXXXXXXXXXXXXXXMEFARYENETEILR 182
ME AR+E++ ++R+ R R E E
Sbjct: 295 REKLEMEMEAARHEHQVMLMRQDLMRRQEELRRMEELHNQEVQKRKQLELRQEEERRRRE 354
Query: 183 EQLRQREADRERQKQE 198
E++R+++ + R++QE
Sbjct: 355 EEMRRQQEEMMRRQQE 370
>RGD|1549738 [details] [associations]
symbol:Nono "non-POU domain containing, octamer-binding"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016363
"nuclear matrix" evidence=IEA;ISO] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0042382 "paraspeckles" evidence=IEA;ISO]
[GO:0042802 "identical protein binding" evidence=IEA;ISO]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 RGD:1549738 GO:GO:0005730 GO:GO:0006355 GO:GO:0008380
GO:GO:0000166 GO:GO:0003677 GO:GO:0016607 GO:GO:0006281
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723
GO:GO:0006310 InterPro:IPR012975 Pfam:PF08075 eggNOG:NOG298586
GeneTree:ENSGT00390000005004 CTD:4841 HOGENOM:HOG000231095
HOVERGEN:HBG009801 KO:K13214 OMA:NQQYHKE OrthoDB:EOG4ZCT50
EMBL:BC089880 IPI:IPI00205912 RefSeq:NP_001012356.1 UniGene:Rn.8381
ProteinModelPortal:Q5FVM4 SMR:Q5FVM4 IntAct:Q5FVM4 STRING:Q5FVM4
PhosphoSite:Q5FVM4 PRIDE:Q5FVM4 Ensembl:ENSRNOT00000004911
GeneID:317259 KEGG:rno:317259 UCSC:RGD:1549738 InParanoid:Q5FVM4
NextBio:671515 Genevestigator:Q5FVM4 GermOnline:ENSRNOG00000003689
Uniprot:Q5FVM4
Length = 476
Score = 312 (114.9 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 72/196 (36%), Positives = 101/196 (51%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
+ERAVV+VDDRG +GI+EF+ KPAA +AL RC +G F LT +PV VEP+D +DDE
Sbjct: 179 VERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLTTFPRPVTVEPMDQLDDE 238
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXXX 122
EGL E+ V K + + K+R PRFA GSFE+EY RWK L
Sbjct: 239 EGLPEKLVIK-NQQFHKEREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQDQVDRNIKEA 297
Query: 123 XXXXXXXMEFARYENETEILRERECRFVXXXXXXXXXXXXXXXXXXMEFARYENETEILR 182
ME AR+E++ ++R+ R R E E
Sbjct: 298 REKLEMEMEAARHEHQVMLMRQDLMRRQEELRRMEELHNQEVQKRKQLELRQEEERRRRE 357
Query: 183 EQLRQREADRERQKQE 198
E++R+++ + R++QE
Sbjct: 358 EEMRRQQEEMMRRQQE 373
>UNIPROTKB|F1Q1U4 [details] [associations]
symbol:F1Q1U4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR012975
Pfam:PF08075 GeneTree:ENSGT00390000005004 EMBL:AAEX03003072
Ensembl:ENSCAFT00000027920 Uniprot:F1Q1U4
Length = 678
Score = 316 (116.3 bits), Expect = 1.8e-27, P = 1.8e-27
Identities = 84/219 (38%), Positives = 120/219 (54%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
IERAVV+VDDRG S +GI+EF KP A +A +RC +GVF LT + +PVIVEPL+ +DDE
Sbjct: 369 IERAVVIVDDRGRSTGKGIVEFASKPVARKAFERCGEGVFLLTTTPRPVIVEPLEQLDDE 428
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXXX 122
+GLSE+ +++K+ Y K+R PR A G+FE+EY RWK L
Sbjct: 429 DGLSEK-LAQKNPMYQKERETPPRVAQHGTFEYEYSQRWKSLDEMEKQQREQVEKNMKDA 487
Query: 123 XXXXXXXMEFARYENETEILRERECRFVXXXXXXXXXXXXXXXXXXMEFARYENETEILR 182
ME A +E++ +LR+ R EF + E + +
Sbjct: 488 KDKLENEMEDAYHEHQANLLRQDLMRCQEELRRME------------EF--HNQEMQKCK 533
Query: 183 E-QLRQREADRERQKQEWELKERHAEEQ-RRCDEEAMRR 219
E QLRQ E +R R+++E +++R +EQ RR EE+ R
Sbjct: 534 EMQLRQEE-ERRRREEEM-IRQREMKEQMRRQREESYSR 570
>UNIPROTKB|G3N361 [details] [associations]
symbol:NONO "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0042382 "paraspeckles" evidence=IEA] [GO:0016363 "nuclear
matrix" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0016363 GO:GO:0042382 InterPro:IPR012975 Pfam:PF08075
GeneTree:ENSGT00390000005004 OMA:NQQYHKE EMBL:DAAA02072840
Ensembl:ENSBTAT00000063337 Uniprot:G3N361
Length = 528
Score = 312 (114.9 bits), Expect = 2.0e-27, P = 2.0e-27
Identities = 72/196 (36%), Positives = 101/196 (51%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
+ERAVV+VDDRG +GI+EF+ KPAA +AL RC +G F LT +PV VEP+D +DDE
Sbjct: 231 VERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLTTFPRPVTVEPMDQLDDE 290
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXXX 122
EGL E+ V K + + K+R PRFA GSFE+EY RWK L
Sbjct: 291 EGLPEKLVIK-NQQFHKEREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQDQVDRNIKEA 349
Query: 123 XXXXXXXMEFARYENETEILRERECRFVXXXXXXXXXXXXXXXXXXMEFARYENETEILR 182
ME AR+E++ ++R+ R R E E
Sbjct: 350 REKLEMEMEAARHEHQVMLMRQDLMRRQEELRRMEELHNQEVQKRKQLELRQEEERRRRE 409
Query: 183 EQLRQREADRERQKQE 198
E++R+++ + R++QE
Sbjct: 410 EEMRRQQEEMMRRQQE 425
>UNIPROTKB|E2QXH2 [details] [associations]
symbol:PSPC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR012975
Pfam:PF08075 GeneTree:ENSGT00390000005004 OMA:DNREQEM
EMBL:AAEX03014280 Ensembl:ENSCAFT00000011791 Uniprot:E2QXH2
Length = 519
Score = 311 (114.5 bits), Expect = 2.4e-27, P = 2.4e-27
Identities = 78/230 (33%), Positives = 116/230 (50%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
+E+AVV+VDDRG + +G +EF KP A +AL+RC DG F LT + +PVIVEP++ DDE
Sbjct: 178 VEKAVVVVDDRGRATGKGFVEFAAKPPARKALERCGDGAFLLTTTPRPVIVEPMEQFDDE 237
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXXX 122
+GL E+ + +K+ Y K+R PRFA G+FEFEY +RWK L
Sbjct: 238 DGLPEKLM-QKTQQYHKEREQPPRFAQPGTFEFEYASRWKALDEMEKQQREQVDRNIREA 296
Query: 123 XXXXXXXMEFARYENETEILRERECRFVXXXXXXXXXXXXXXXXXXMEFARYENETEILR 182
ME AR+E++ ++R+ R +E R N+ R
Sbjct: 297 KEKLEAEMEAARHEHQLMLMRQDLMR-------------RQEELRRLEELR--NQELQKR 341
Query: 183 EQLRQREADRERQKQEWELKERHAEEQRRCDEEAMRRQTEEIHLRMQQQD 232
+Q++ R + R+++E ++ R EE RR E E M+ D
Sbjct: 342 KQIQLRHEEEHRRREEEMIRHREQEELRRQQEGFKPNYMENREQEMRMGD 391
>UNIPROTKB|Q1LZD9 [details] [associations]
symbol:PSPC1 "Paraspeckle component 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0016363
"nuclear matrix" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0042382
"paraspeckles" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005737 GO:GO:0005730
GO:GO:0006355 GO:GO:0000166 GO:GO:0016607 Gene3D:3.30.70.330
GO:GO:0006351 GO:GO:0003723 GO:GO:0016363 GO:GO:0042382
InterPro:IPR012975 Pfam:PF08075 eggNOG:NOG298586
GeneTree:ENSGT00390000005004 HOGENOM:HOG000231095
HOVERGEN:HBG009801 EMBL:BC116062 IPI:IPI00706558
RefSeq:NP_001068745.1 UniGene:Bt.55499 ProteinModelPortal:Q1LZD9
SMR:Q1LZD9 PRIDE:Q1LZD9 Ensembl:ENSBTAT00000005134 GeneID:506696
KEGG:bta:506696 CTD:55269 InParanoid:Q1LZD9 OMA:DNREQEM
OrthoDB:EOG444KKN NextBio:20867718 Uniprot:Q1LZD9
Length = 520
Score = 311 (114.5 bits), Expect = 2.4e-27, P = 2.4e-27
Identities = 78/230 (33%), Positives = 116/230 (50%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
+E+AVV+VDDRG + +G +EF KP A +AL+RC DG F LT + +PVIVEP++ DDE
Sbjct: 179 VEKAVVVVDDRGRATGKGFVEFAAKPPARKALERCGDGAFLLTTTPRPVIVEPMEQFDDE 238
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXXX 122
+GL E+ + +K+ Y K+R PRFA G+FEFEY +RWK L
Sbjct: 239 DGLPEKLM-QKTQQYHKEREQPPRFAQPGTFEFEYASRWKALDEMEKQQREQVDRNIREA 297
Query: 123 XXXXXXXMEFARYENETEILRERECRFVXXXXXXXXXXXXXXXXXXMEFARYENETEILR 182
ME AR+E++ ++R+ R +E R N+ R
Sbjct: 298 KEKLEAEMEAARHEHQLMLMRQDLMR-------------RQEELRRLEELR--NQELQKR 342
Query: 183 EQLRQREADRERQKQEWELKERHAEEQRRCDEEAMRRQTEEIHLRMQQQD 232
+Q++ R + R+++E ++ R EE RR E E M+ D
Sbjct: 343 KQIQLRHEEEHRRREEEMIRHREQEELRRQQEGFKPNYMENREQEMRMGD 392
>RGD|1310122 [details] [associations]
symbol:Pspc1 "paraspeckle component 1" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016363 "nuclear matrix" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0042382
"paraspeckles" evidence=IEA;ISO] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:1310122 GO:GO:0005737 GO:GO:0005730 GO:GO:0006355 GO:GO:0000166
GO:GO:0016607 Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723
GO:GO:0016363 GO:GO:0042382 InterPro:IPR012975 Pfam:PF08075
eggNOG:NOG298586 GeneTree:ENSGT00390000005004 HOGENOM:HOG000231095
HOVERGEN:HBG009801 CTD:55269 OMA:DNREQEM OrthoDB:EOG444KKN
HSSP:Q99K48 EMBL:BC099204 IPI:IPI00203753 RefSeq:NP_001020843.1
UniGene:Rn.140724 ProteinModelPortal:Q4KLH4 SMR:Q4KLH4
STRING:Q4KLH4 PhosphoSite:Q4KLH4 Ensembl:ENSRNOT00000028219
GeneID:305910 KEGG:rno:305910 UCSC:RGD:1310122 InParanoid:Q4KLH4
NextBio:655234 Genevestigator:Q4KLH4 Uniprot:Q4KLH4
Length = 522
Score = 311 (114.5 bits), Expect = 2.4e-27, P = 2.4e-27
Identities = 78/230 (33%), Positives = 116/230 (50%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
+E+AVV+VDDRG + +G +EF KP A +AL+RC DG F LT + +PVIVEP++ DDE
Sbjct: 181 VEKAVVVVDDRGRATGKGFVEFAAKPPARKALERCGDGAFLLTTTPRPVIVEPMEQFDDE 240
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXXX 122
+GL E+ + +K+ Y K+R PRFA G+FEFEY +RWK L
Sbjct: 241 DGLPEKLM-QKTQQYHKEREQPPRFAQPGTFEFEYASRWKALDEMEKQQREQVDRNIREA 299
Query: 123 XXXXXXXMEFARYENETEILRERECRFVXXXXXXXXXXXXXXXXXXMEFARYENETEILR 182
ME AR+E++ ++R+ R +E R N+ R
Sbjct: 300 KEKLEAEMEAARHEHQLMLMRQDLMR-------------RQEELRRLEELR--NQELQKR 344
Query: 183 EQLRQREADRERQKQEWELKERHAEEQRRCDEEAMRRQTEEIHLRMQQQD 232
+Q++ R + R+++E ++ R EE RR E E M+ D
Sbjct: 345 KQIQLRHEEEHRRREEEMIRHREQEELRRQQEGFKPNYMENREQEMRMGD 394
>UNIPROTKB|Q8WXF1 [details] [associations]
symbol:PSPC1 "Paraspeckle component 1" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0042382
"paraspeckles" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016363 "nuclear matrix" evidence=IEA] [GO:0016607 "nuclear
speck" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005737 GO:GO:0005730
GO:GO:0006355 GO:GO:0000166 GO:GO:0016607 EMBL:CH471075
Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723 GO:GO:0016363
GO:GO:0042382 InterPro:IPR012975 Pfam:PF08075 EMBL:AL354808
eggNOG:NOG298586 PDB:3SDE PDBsum:3SDE HOGENOM:HOG000231095
HOVERGEN:HBG009801 CTD:55269 OMA:DNREQEM OrthoDB:EOG444KKN
EMBL:AF448795 EMBL:AF449627 EMBL:AK001817 EMBL:BC014184
EMBL:CR457272 EMBL:AL834505 IPI:IPI00103525 IPI:IPI00395775
RefSeq:NP_001035879.1 UniGene:Hs.213198 ProteinModelPortal:Q8WXF1
SMR:Q8WXF1 IntAct:Q8WXF1 MINT:MINT-1395719 STRING:Q8WXF1
PhosphoSite:Q8WXF1 DMDM:74762636 PaxDb:Q8WXF1 PRIDE:Q8WXF1
DNASU:55269 Ensembl:ENST00000338910 Ensembl:ENST00000427943
Ensembl:ENST00000471658 Ensembl:ENST00000492741 GeneID:55269
KEGG:hsa:55269 UCSC:uc021rgx.1 GeneCards:GC13M020249
H-InvDB:HIX0011177 HGNC:HGNC:20320 HPA:HPA038904 MIM:612408
neXtProt:NX_Q8WXF1 PharmGKB:PA134968603 InParanoid:Q8WXF1
PhylomeDB:Q8WXF1 ChiTaRS:PSPC1 GenomeRNAi:55269 NextBio:59380
ArrayExpress:Q8WXF1 Bgee:Q8WXF1 CleanEx:HS_PSPC1
Genevestigator:Q8WXF1 Uniprot:Q8WXF1
Length = 523
Score = 311 (114.5 bits), Expect = 2.5e-27, P = 2.5e-27
Identities = 78/230 (33%), Positives = 116/230 (50%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
+E+AVV+VDDRG + +G +EF KP A +AL+RC DG F LT + +PVIVEP++ DDE
Sbjct: 182 VEKAVVVVDDRGRATGKGFVEFAAKPPARKALERCGDGAFLLTTTPRPVIVEPMEQFDDE 241
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXXX 122
+GL E+ + +K+ Y K+R PRFA G+FEFEY +RWK L
Sbjct: 242 DGLPEKLM-QKTQQYHKEREQPPRFAQPGTFEFEYASRWKALDEMEKQQREQVDRNIREA 300
Query: 123 XXXXXXXMEFARYENETEILRERECRFVXXXXXXXXXXXXXXXXXXMEFARYENETEILR 182
ME AR+E++ ++R+ R +E R N+ R
Sbjct: 301 KEKLEAEMEAARHEHQLMLMRQDLMR-------------RQEELRRLEELR--NQELQKR 345
Query: 183 EQLRQREADRERQKQEWELKERHAEEQRRCDEEAMRRQTEEIHLRMQQQD 232
+Q++ R + R+++E ++ R EE RR E E M+ D
Sbjct: 346 KQIQLRHEEEHRRREEEMIRHREQEELRRQQEGFKPNYMENREQEMRMGD 395
>UNIPROTKB|E2RIS4 [details] [associations]
symbol:E2RIS4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR012975
Pfam:PF08075 GeneTree:ENSGT00390000005004 EMBL:AAEX03026810
ProteinModelPortal:E2RIS4 Ensembl:ENSCAFT00000029021 OMA:NEREMPP
Uniprot:E2RIS4
Length = 663
Score = 313 (115.2 bits), Expect = 3.6e-27, P = 3.6e-27
Identities = 82/219 (37%), Positives = 117/219 (53%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
IERAVV+VDDRG S +GI+EF KPAA +A +RC GVF LT +PVIVEPL+ +DDE
Sbjct: 353 IERAVVIVDDRGRSTGKGIVEFASKPAARKAFERCGKGVFLLTTMPRPVIVEPLEQLDDE 412
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXXX 122
+GL E+ +++++ Y +R + PRFA G+ E+EY RWK L
Sbjct: 413 DGLPEK-LAQRNPMYQNEREMPPRFAQYGTLEYEYSQRWKSLDEMEKQQREQVEKIMKDA 471
Query: 123 XXXXXXXMEFARYENETEILRERECRFVXXXXXXXXXXXXXXXXXXMEFARYENETEILR 182
ME A +E+ +LR+ R ME + E + +
Sbjct: 472 KDKLENEMEDAYHEHRANLLRQNLMRC-------------QEELRRME-ELHNQEMQKRK 517
Query: 183 E-QLRQREADRERQKQEWELKERHAEEQ-RRCDEEAMRR 219
E QL+Q E +R R+++E +++R EEQ RR EE+ R
Sbjct: 518 EMQLKQEE-ERRRREEEMMIRQREMEEQMRRQREESYSR 555
>ZFIN|ZDB-GENE-030131-713 [details] [associations]
symbol:nono "non-POU domain containing,
octamer-binding" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030131-713
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR012975
Pfam:PF08075 HSSP:P52298 GeneTree:ENSGT00390000005004 CTD:4841
HOGENOM:HOG000231095 HOVERGEN:HBG009801 KO:K13214 OMA:LEFEMES
EMBL:BX470076 EMBL:BX511098 EMBL:BC046880 IPI:IPI00498278
RefSeq:NP_963873.1 UniGene:Dr.150274 SMR:Q802Z5
Ensembl:ENSDART00000011699 GeneID:321994 KEGG:dre:321994
InParanoid:Q802Z5 NextBio:20807618 Uniprot:Q802Z5
Length = 441
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 73/210 (34%), Positives = 100/210 (47%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
IERA+V+VDDRG +GI+EF KP+A +AL RC DG F LT +PV +EP++ +D+E
Sbjct: 172 IERAIVIVDDRGRPTGKGIVEFANKPSARKALDRCGDGAFLLTAFPRPVTIEPMEQLDEE 231
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXXX 122
EGL ER ++K Y K+R PRFA GSFE+EY RWK L
Sbjct: 232 EGLPERLINKNPV-YHKEREQPPRFAQPGSFEYEYAMRWKALMEMEKQQYEQVDRNIKEA 290
Query: 123 XXXXXXXMEFARYENETEILRERECRFVXXXXXXXXXXXXXXXXXXMEFARYENETEILR 182
+E AR+E++ ++R+ R R E E
Sbjct: 291 KEKLETELEAARHEHQVMLMRQDLLRRQEELRRMEEAHSQEVQKRKQMELRQEEERRRRE 350
Query: 183 EQLR--QREADRERQKQEWELKERHAEEQR 210
E+LR E R +Q Q E+ + R
Sbjct: 351 EELRAHSEELMRRQQGQGGNFSEKRDPDMR 380
>UNIPROTKB|F1Q0F6 [details] [associations]
symbol:F1Q0F6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR012975
Pfam:PF08075 GeneTree:ENSGT00390000005004 EMBL:AAEX03010245
ProteinModelPortal:F1Q0F6 Ensembl:ENSCAFT00000005152 OMA:LEFEMES
Uniprot:F1Q0F6
Length = 470
Score = 304 (112.1 bits), Expect = 7.7e-27, P = 7.7e-27
Identities = 71/196 (36%), Positives = 100/196 (51%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
+ERAVV+VDDRG +GI+EF+ KPAA +AL RC +G F LT +PV VEP+D +DDE
Sbjct: 173 VERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLTTFPRPVTVEPMDQLDDE 232
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXXX 122
EGL E+ V K + + K+R PRFA GS E+EY RWK L
Sbjct: 233 EGLPEKLVIK-NQQFHKEREQPPRFAQPGSSEYEYAMRWKALIEMEKQQQDQVDRNIKEA 291
Query: 123 XXXXXXXMEFARYENETEILRERECRFVXXXXXXXXXXXXXXXXXXMEFARYENETEILR 182
ME AR+E++ ++R+ R R E E
Sbjct: 292 REKLEMEMEAARHEHQVMLMRQDLMRRQEELRRMEELHNQEVQKRKQLELRQEEERRRRE 351
Query: 183 EQLRQREADRERQKQE 198
E++R+++ + R++QE
Sbjct: 352 EEMRRQQEEMMRRQQE 367
>ZFIN|ZDB-GENE-040426-2452 [details] [associations]
symbol:sfpq "splicing factor proline/glutamine
rich (polypyrimidine tract binding protein associated)"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0007420 "brain development" evidence=IMP] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-040426-2452 GO:GO:0007420 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR012975 Pfam:PF08075
HOVERGEN:HBG009801 EMBL:AY648751 IPI:IPI00507036 UniGene:Dr.32607
ProteinModelPortal:Q6DRK8 SMR:Q6DRK8 STRING:Q6DRK8 PRIDE:Q6DRK8
InParanoid:Q6DRK8 ArrayExpress:Q6DRK8 Bgee:Q6DRK8 Uniprot:Q6DRK8
Length = 638
Score = 308 (113.5 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 81/218 (37%), Positives = 119/218 (54%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
+ERA+V+VDDRG S +GI+EF+ KPAA +A+ R DGVF LT S +P++VE L+ DDE
Sbjct: 339 VERAIVIVDDRGRSTGKGIVEFSSKPAARKAMDRISDGVFLLTSSPRPIVVELLEQYDDE 398
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXXX 122
+GL E+ +++K+ Y K+R PRFA G+FE+EY RWK L
Sbjct: 399 DGLPEK-LAQKNPSYQKEREQPPRFARPGTFEYEYSQRWKSLDEMEKQQRQQVEKNICEA 457
Query: 123 XXXXXXXMEFARYENETEILRERECRFVXXXXXXXXXXXXXXXXXXMEFARYENETEILR 182
M+ A +E++ +LR+ R ME + E + +
Sbjct: 458 REKLETEMDDAYHEHQANMLRQDLLR-------------RQEELRRME-ELHSQEMQKRK 503
Query: 183 E-QLRQREADRERQKQEWELKERHAEEQ-RRCDEEAMR 218
E QLRQ E +R R+++E +++R EEQ RR EE+ R
Sbjct: 504 EMQLRQEE-ERRRREEEM-MRQREIEEQLRRKREESYR 539
>UNIPROTKB|F1M3I1 [details] [associations]
symbol:F1M3I1 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR012975
Pfam:PF08075 IPI:IPI00947725 ProteinModelPortal:F1M3I1
Ensembl:ENSRNOT00000068010 Uniprot:F1M3I1
Length = 296
Score = 239 (89.2 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
Identities = 54/107 (50%), Positives = 66/107 (61%)
Query: 3 IERAVVLVDDRGNSKNE-----GIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLD 57
+ERAVV VDDR + E G EF+ KPAA +AL RC +G F LT +P VEP+D
Sbjct: 131 VERAVVTVDDRRKALRERPSGKGTAEFSGKPAARKALDRCSEGSFLLTTFPRPATVEPMD 190
Query: 58 LVDDEEGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQL 104
+DDEEGL E V K + + ++R PRFA GSFE EY RWK L
Sbjct: 191 QLDDEEGLPEELVLK-NQQFHEEREQPPRFAQPGSFEKEYTMRWKAL 236
Score = 64 (27.6 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
Identities = 20/68 (29%), Positives = 36/68 (52%)
Query: 173 RYENETEILREQLRQ--READRERQKQEWELKERHAEEQRRCDEEAMRRQTEEIHLRMQQ 230
R++ EI ++Q Q R ++ R+K E E H R ++ MRRQ EE+ +
Sbjct: 232 RWKALIEIEKQQQDQVDRNIEQAREKMEMEAAREHQVMLMR--QDLMRRQ-EELRRTEEL 288
Query: 231 QDEELRRR 238
++E+++R
Sbjct: 289 HNQEVQKR 296
>WB|WBGene00017778 [details] [associations]
symbol:psf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0002009 "morphogenesis of
an epithelium" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040027 "negative regulation
of vulval development" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0002009 GO:GO:0040007
GO:GO:0002119 GO:GO:0000166 EMBL:FO081045 Gene3D:3.30.70.330
GO:GO:0000003 GO:GO:0003676 GO:GO:0040027 InterPro:IPR012975
Pfam:PF08075 GeneTree:ENSGT00390000005004 KO:K13219
UniGene:Cel.18121 GeneID:175844 KEGG:cel:CELE_F25B5.7 CTD:175844
NextBio:889920 RefSeq:NP_498295.3 ProteinModelPortal:B3GWA1
SMR:B3GWA1 STRING:B3GWA1 PRIDE:B3GWA1 EnsemblMetazoa:F25B5.7a
WormBase:F25B5.7a HOGENOM:HOG000018765 InParanoid:B3GWA1
OMA:ERMIPRT ArrayExpress:B3GWA1 Uniprot:B3GWA1
Length = 562
Score = 258 (95.9 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 54/143 (37%), Positives = 81/143 (56%)
Query: 2 NIERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDD 61
++ERAV +VD++G EGI+EF RKP +A+ +D VF LT S KP+I E L+ D+
Sbjct: 214 DVERAVHIVDEKGRPTGEGIVEFERKPNCNEAMAAIRDKVFLLTASPKPLICEVLEPRDE 273
Query: 62 EEGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQLYXXXXXXXXXXXXXXXX 121
++GL+ER + + + K+R +GPRF T SFE+ YG +WK+LY
Sbjct: 274 DDGLAERMIPR-TPGLSKERELGPRFPTPNSFEYVYGMKWKELYVVEQKRRAQLDEELRE 332
Query: 122 XXXXXXXXMEFARYENETEILRE 144
ME A + + ++LRE
Sbjct: 333 SRRRLESDMELAYQDYQAQMLRE 355
Score = 52 (23.4 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 169 MEFARYENETEILREQLRQREADRER 194
ME A + + ++LRE L++R+ + ER
Sbjct: 341 MELAYQDYQAQMLREDLQRRQQELER 366
>UNIPROTKB|F1LVR9 [details] [associations]
symbol:F1LVR9 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR012975
Pfam:PF08075 IPI:IPI00559747 Ensembl:ENSRNOT00000029858
Uniprot:F1LVR9
Length = 442
Score = 226 (84.6 bits), Expect = 2.8e-21, Sum P(2) = 2.8e-21
Identities = 48/102 (47%), Positives = 65/102 (63%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
+ERAVV+V+D+ + E EF+ KPA +AL RC +G F LT +PV VEP+D +D+E
Sbjct: 173 VERAVVIVNDK-KALRERHFEFSLKPATQKALGRCSEGSFLLTTFPQPVTVEPMDWLDNE 231
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQL 104
E L E+ + K + K+R PRFA GS E+EYG WK L
Sbjct: 232 ERLPEKLIINKMQ-FHKEREQSPRFAQPGSCEYEYGMHWKAL 272
Score = 49 (22.3 bits), Expect = 2.8e-21, Sum P(2) = 2.8e-21
Identities = 16/56 (28%), Positives = 29/56 (51%)
Query: 169 MEFARYENETEILREQLRQREADRERQKQEWELKERHAEEQRRCDEE-AMRRQTEE 223
ME Y ++ ++R++L + QK E E H +E ++C + M++Q EE
Sbjct: 298 MEATHYGHQVTLMRKELMRH------QKME----ELHNQEVQKCRKRNEMQKQEEE 343
>UNIPROTKB|F1PM01 [details] [associations]
symbol:F1PM01 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR012975
Pfam:PF08075 GeneTree:ENSGT00390000005004 EMBL:AAEX03005167
Ensembl:ENSCAFT00000021845 Uniprot:F1PM01
Length = 391
Score = 196 (74.1 bits), Expect = 9.9e-19, Sum P(2) = 9.9e-19
Identities = 41/84 (48%), Positives = 56/84 (66%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
+ERAVV+VD RG +GI+EF+ KPAA +AL RC++G LT +PV VEP+ +DDE
Sbjct: 173 VERAVVIVDVRGRPSGKGIVEFSGKPAAGKALDRCREGSCLLTTFPRPVTVEPMAQLDDE 232
Query: 63 EGLSERTVSKKSSDYFKQRSIGPR 86
EGL E+ K+ + K+R PR
Sbjct: 233 EGLPEKL---KNQQFHKEREQPPR 253
Score = 54 (24.1 bits), Expect = 9.9e-19, Sum P(2) = 9.9e-19
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 182 REQLRQREAD-RERQKQEWELKERHAEEQRRCDEEAMRRQTE 222
REQ +R+ + R ++ +L+ R EE+RR +EE MR Q E
Sbjct: 248 REQPPRRQEELRSCTTKKKQLELRQEEERRRGEEE-MRWQQE 288
>UNIPROTKB|F1M8Q6 [details] [associations]
symbol:F1M8Q6 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR012975
Pfam:PF08075 GeneTree:ENSGT00390000005004 IPI:IPI00562995
Ensembl:ENSRNOT00000040557 Uniprot:F1M8Q6
Length = 478
Score = 153 (58.9 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 40/102 (39%), Positives = 62/102 (60%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKRCQDGVFFLTQSLKPVIVEPLDLVDDE 62
IER VV+V+ + +G+++F K AA +A +R +G FFL VIVEPL+ ++D+
Sbjct: 326 IERVVVIVNAHRRT-GKGVVDFASKTAARKACERWGEG-FFLADK-DTVIVEPLEELEDK 382
Query: 63 EGLSERTVSKKSSDYFKQRSIGPRFATIGSFEFEYGTRWKQL 104
+GL E+ + + Y +R+ PRFA G+F +E RWK L
Sbjct: 383 DGL-EKLLHRNPM-Y--ERATPPRFAQHGTFGYENPQRWKSL 420
>UNIPROTKB|E1BU51 [details] [associations]
symbol:TNRC15 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000084 "S phase of mitotic cell cycle"
evidence=IEA] [GO:0007631 "feeding behavior" evidence=IEA]
[GO:0008344 "adult locomotory behavior" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0021522 "spinal cord
motor neuron differentiation" evidence=IEA] [GO:0035264
"multicellular organism growth" evidence=IEA] [GO:0044267 "cellular
protein metabolic process" evidence=IEA] [GO:0048009 "insulin-like
growth factor receptor signaling pathway" evidence=IEA] [GO:0048873
"homeostasis of number of cells within a tissue" evidence=IEA]
[GO:0050881 "musculoskeletal movement" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
InterPro:IPR003169 Pfam:PF02213 PROSITE:PS50829 SMART:SM00444
GO:GO:0044267 GO:GO:0048009 GO:GO:0000084 SUPFAM:SSF55277
GeneTree:ENSGT00660000095550 EMBL:AADN02024438 IPI:IPI00588711
Ensembl:ENSGALT00000002246 ArrayExpress:E1BU51 Uniprot:E1BU51
Length = 966
Score = 126 (49.4 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 33/75 (44%), Positives = 49/75 (65%)
Query: 172 ARYENETEILREQLRQREADRERQKQEWELKERHAEE-QRRCDEEAMRRQTE-EIHLRMQ 229
A+ E E +E+LR+++ + R++QE E K R EE RR EEA+RRQ E EI LR Q
Sbjct: 426 AKREEEERKRQEELRRQQEELLRRQQEDERKRREEEELARRKQEEALRRQREQEIALRRQ 485
Query: 230 QQDEELRRRHQENSI 244
+++EE R+ QE ++
Sbjct: 486 REEEE--RQQQEEAL 498
>UNIPROTKB|A7MB14 [details] [associations]
symbol:GIGYF2 "GIGYF2 protein" species:9913 "Bos taurus"
[GO:0050885 "neuromuscular process controlling balance"
evidence=IEA] [GO:0050881 "musculoskeletal movement" evidence=IEA]
[GO:0048873 "homeostasis of number of cells within a tissue"
evidence=IEA] [GO:0048009 "insulin-like growth factor receptor
signaling pathway" evidence=IEA] [GO:0044267 "cellular protein
metabolic process" evidence=IEA] [GO:0035264 "multicellular
organism growth" evidence=IEA] [GO:0021522 "spinal cord motor
neuron differentiation" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0008344 "adult locomotory behavior"
evidence=IEA] [GO:0007631 "feeding behavior" evidence=IEA]
[GO:0000084 "S phase of mitotic cell cycle" evidence=IEA]
InterPro:IPR003169 Pfam:PF02213 PROSITE:PS50829 SMART:SM00444
GO:GO:0007631 GO:GO:0008344 GO:GO:0050885 GO:GO:0021522
GO:GO:0009791 GO:GO:0050881 GO:GO:0048873 GO:GO:0035264
GO:GO:0044267 GO:GO:0048009 GO:GO:0000084 SUPFAM:SSF55277
eggNOG:NOG330740 GeneTree:ENSGT00660000095550 HOGENOM:HOG000290720
HOVERGEN:HBG082121 OrthoDB:EOG40VVP7 CTD:26058 OMA:SNTTACQ
EMBL:DAAA02009260 EMBL:DAAA02009261 EMBL:DAAA02009262
EMBL:DAAA02009263 EMBL:DAAA02009264 EMBL:DAAA02009265
EMBL:DAAA02009266 EMBL:DAAA02009267 EMBL:BC151282 IPI:IPI00694207
RefSeq:NP_001095347.1 UniGene:Bt.77827 Ensembl:ENSBTAT00000018720
GeneID:506913 KEGG:bta:506913 InParanoid:A7MB14 NextBio:20867798
Uniprot:A7MB14
Length = 1291
Score = 127 (49.8 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 33/75 (44%), Positives = 49/75 (65%)
Query: 172 ARYENETEILREQLRQREADRERQKQEWELKERHAEE-QRRCDEEAMRRQTE-EIHLRMQ 229
A+ E E +E+LR+++ + R++QE E K R EE RR EEA+RRQ E EI LR Q
Sbjct: 747 AKREEEERKRQEELRRQQEEILRRQQEEERKRREEEELARRKQEEALRRQREQEIALRQQ 806
Query: 230 QQDEELRRRHQENSI 244
+++EE R+ QE ++
Sbjct: 807 REEEE--RQQQEEAL 819
Score = 121 (47.7 bits), Expect = 0.00027, P = 0.00027
Identities = 35/88 (39%), Positives = 51/88 (57%)
Query: 170 EFARYENETEILREQ------LRQREADRERQKQEWELKE----RHAEEQRRCDEEAMRR 219
E AR + E E LR Q LRQ+ + ERQ+QE L+ R EE+RR EE +R+
Sbjct: 783 ELARRKQE-EALRRQREQEIALRQQREEEERQQQEEALRRLEERRREEEERRKQEELLRK 841
Query: 220 QTEEIHLRMQQQDEELRRRHQENSIFMQ 247
Q EE + +++EE +RR +EN + M+
Sbjct: 842 QEEEA-AKWAREEEEAQRRLEENRLRME 868
>MGI|MGI:2138584 [details] [associations]
symbol:Gigyf2 "GRB10 interacting GYF protein 2"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005575 "cellular_component" evidence=ND]
[GO:0007631 "feeding behavior" evidence=IMP] [GO:0008344 "adult
locomotory behavior" evidence=IMP] [GO:0009791 "post-embryonic
development" evidence=IMP] [GO:0017148 "negative regulation of
translation" evidence=ISO] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=IMP] [GO:0031571 "mitotic G1 DNA damage
checkpoint" evidence=IMP] [GO:0035264 "multicellular organism
growth" evidence=IMP] [GO:0044267 "cellular protein metabolic
process" evidence=IMP] [GO:0048009 "insulin-like growth factor
receptor signaling pathway" evidence=IMP] [GO:0048873 "homeostasis
of number of cells within a tissue" evidence=IMP] [GO:0050881
"musculoskeletal movement" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] InterPro:IPR003169
Pfam:PF02213 PROSITE:PS50829 SMART:SM00444 MGI:MGI:2138584
GO:GO:0007631 GO:GO:0008344 GO:GO:0050885 GO:GO:0021522
GO:GO:0009791 GO:GO:0050881 GO:GO:0048873 GO:GO:0035264
GO:GO:0044267 GO:GO:0048009 GO:GO:0000084 SUPFAM:SSF55277
HSSP:Q9FT92 eggNOG:NOG330740 GeneTree:ENSGT00660000095550
HOVERGEN:HBG082121 OrthoDB:EOG40VVP7 CTD:26058 ChiTaRS:GIGYF2
EMBL:AY176043 EMBL:BC027137 EMBL:BC030845 EMBL:BC082811
EMBL:BC089036 EMBL:AK144058 EMBL:AK122337 IPI:IPI00473912
IPI:IPI00816882 RefSeq:NP_001103682.1 RefSeq:NP_666224.3
UniGene:Mm.23065 ProteinModelPortal:Q6Y7W8 SMR:Q6Y7W8
MINT:MINT-266607 STRING:Q6Y7W8 PhosphoSite:Q6Y7W8 PaxDb:Q6Y7W8
PRIDE:Q6Y7W8 Ensembl:ENSMUST00000027475 Ensembl:ENSMUST00000174501
GeneID:227331 KEGG:mmu:227331 UCSC:uc007bwr.2 InParanoid:Q6Y7W8
OMA:SNTTACQ NextBio:378560 Bgee:Q6Y7W8 CleanEx:MM_GIGYF2
Genevestigator:Q6Y7W8 Uniprot:Q6Y7W8
Length = 1291
Score = 126 (49.4 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 33/75 (44%), Positives = 49/75 (65%)
Query: 172 ARYENETEILREQLRQREADRERQKQEWELKERHAEE-QRRCDEEAMRRQTE-EIHLRMQ 229
A+ E E +E+LR+++ + R++QE E K R EE RR EEA+RRQ E EI LR Q
Sbjct: 749 AKREEEERKRQEELRRQQEEILRRQQEEERKRREEEELARRKQEEALRRQREQEIALRRQ 808
Query: 230 QQDEELRRRHQENSI 244
+++EE R+ QE ++
Sbjct: 809 REEEE--RQQQEEAL 821
Score = 117 (46.2 bits), Expect = 0.00078, P = 0.00078
Identities = 35/83 (42%), Positives = 50/83 (60%)
Query: 170 EFARYENETEI-LREQLRQREADRERQKQEWELKE----RHAEEQRRCDEEAMRRQTEEI 224
E R + E EI LR RQRE + ERQ+QE L+ R EE+RR EE +R+Q EE
Sbjct: 793 EALRRQREQEIALR---RQRE-EEERQQQEEALRRLEERRREEEERRKQEELLRKQEEEA 848
Query: 225 HLRMQQQDEELRRRHQENSIFMQ 247
+ +++EE +RR +EN + M+
Sbjct: 849 -AKWAREEEEAQRRLEENRLRME 870
>UNIPROTKB|Q6Y7W6 [details] [associations]
symbol:GIGYF2 "PERQ amino acid-rich with GYF
domain-containing protein 2" species:9606 "Homo sapiens"
[GO:0008219 "cell death" evidence=IEA] [GO:0000084 "S phase of
mitotic cell cycle" evidence=IEA] [GO:0007631 "feeding behavior"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IEA] [GO:0021522
"spinal cord motor neuron differentiation" evidence=IEA]
[GO:0035264 "multicellular organism growth" evidence=IEA]
[GO:0044267 "cellular protein metabolic process" evidence=IEA]
[GO:0048009 "insulin-like growth factor receptor signaling pathway"
evidence=IEA] [GO:0048873 "homeostasis of number of cells within a
tissue" evidence=IEA] [GO:0050881 "musculoskeletal movement"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IMP] InterPro:IPR003169 Pfam:PF02213
PROSITE:PS50829 SMART:SM00444 GO:GO:0008219 GO:GO:0007631
GO:GO:0008344 GO:GO:0050885 GO:GO:0021522 GO:GO:0009791
GO:GO:0050881 GO:GO:0048873 GO:GO:0035264 GO:GO:0044267
GO:GO:0048009 GO:GO:0000084 Orphanet:2828 SUPFAM:SSF55277
HSSP:Q9FT92 EMBL:AC064852 eggNOG:NOG330740 EMBL:AC016692
HOGENOM:HOG000290720 HOVERGEN:HBG082121 OrthoDB:EOG40VVP7
EMBL:AY176045 EMBL:AB014542 EMBL:BX538172 EMBL:AK001739
EMBL:BX537885 EMBL:BX538321 EMBL:BC008072 EMBL:BC146775
IPI:IPI00647635 IPI:IPI00784233 IPI:IPI00916026 IPI:IPI00916904
PIR:T00377 RefSeq:NP_001096616.1 RefSeq:NP_001096617.1
RefSeq:NP_001096618.1 RefSeq:NP_056390.2 UniGene:Hs.565319
ProteinModelPortal:Q6Y7W6 SMR:Q6Y7W6 IntAct:Q6Y7W6
MINT:MINT-1365781 STRING:Q6Y7W6 DMDM:74710467 PaxDb:Q6Y7W6
PRIDE:Q6Y7W6 DNASU:26058 Ensembl:ENST00000373563
Ensembl:ENST00000409196 Ensembl:ENST00000409451
Ensembl:ENST00000409547 GeneID:26058 KEGG:hsa:26058 UCSC:uc002vti.4
CTD:26058 GeneCards:GC02P233562 HGNC:HGNC:11960 MIM:607688
MIM:612003 neXtProt:NX_Q6Y7W6 PharmGKB:PA36647 ChiTaRS:GIGYF2
GenomeRNAi:26058 NextBio:47940 ArrayExpress:Q6Y7W6 Bgee:Q6Y7W6
CleanEx:HS_GIGYF2 Genevestigator:Q6Y7W6 Uniprot:Q6Y7W6
Length = 1299
Score = 126 (49.4 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 33/75 (44%), Positives = 49/75 (65%)
Query: 172 ARYENETEILREQLRQREADRERQKQEWELKERHAEE-QRRCDEEAMRRQTE-EIHLRMQ 229
A+ E E +E+LR+++ + R++QE E K R EE RR EEA+RRQ E EI LR Q
Sbjct: 748 AKREEEERKRQEELRRQQEEILRRQQEEERKRREEEELARRKQEEALRRQREQEIALRRQ 807
Query: 230 QQDEELRRRHQENSI 244
+++EE R+ QE ++
Sbjct: 808 REEEE--RQQQEEAL 820
Score = 117 (46.2 bits), Expect = 0.00079, P = 0.00079
Identities = 35/83 (42%), Positives = 50/83 (60%)
Query: 170 EFARYENETEI-LREQLRQREADRERQKQEWELKE----RHAEEQRRCDEEAMRRQTEEI 224
E R + E EI LR RQRE + ERQ+QE L+ R EE+RR EE +R+Q EE
Sbjct: 792 EALRRQREQEIALR---RQRE-EEERQQQEEALRRLEERRREEEERRKQEELLRKQEEEA 847
Query: 225 HLRMQQQDEELRRRHQENSIFMQ 247
+ +++EE +RR +EN + M+
Sbjct: 848 -AKWAREEEEAQRRLEENRLRME 869
>UNIPROTKB|F1PWP6 [details] [associations]
symbol:GIGYF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0050881 "musculoskeletal movement"
evidence=IEA] [GO:0048873 "homeostasis of number of cells within a
tissue" evidence=IEA] [GO:0048009 "insulin-like growth factor
receptor signaling pathway" evidence=IEA] [GO:0044267 "cellular
protein metabolic process" evidence=IEA] [GO:0035264 "multicellular
organism growth" evidence=IEA] [GO:0021522 "spinal cord motor
neuron differentiation" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0008344 "adult locomotory behavior"
evidence=IEA] [GO:0007631 "feeding behavior" evidence=IEA]
[GO:0000084 "S phase of mitotic cell cycle" evidence=IEA]
InterPro:IPR003169 Pfam:PF02213 PROSITE:PS50829 SMART:SM00444
GO:GO:0007631 GO:GO:0008344 GO:GO:0050885 GO:GO:0021522
GO:GO:0009791 GO:GO:0050881 GO:GO:0048873 GO:GO:0035264
GO:GO:0044267 GO:GO:0048009 GO:GO:0000084 SUPFAM:SSF55277
GeneTree:ENSGT00660000095550 OMA:SNTTACQ EMBL:AAEX03014450
Ensembl:ENSCAFT00000018353 Uniprot:F1PWP6
Length = 1317
Score = 126 (49.4 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 33/75 (44%), Positives = 49/75 (65%)
Query: 172 ARYENETEILREQLRQREADRERQKQEWELKERHAEE-QRRCDEEAMRRQTE-EIHLRMQ 229
A+ E E +E+LR+++ + R++QE E K R EE RR EEA+RRQ E EI LR Q
Sbjct: 769 AKREEEERKRQEELRRQQEEILRRQQEEERKRREEEELARRKQEEALRRQREQEIALRRQ 828
Query: 230 QQDEELRRRHQENSI 244
+++EE R+ QE ++
Sbjct: 829 REEEE--RQQQEEAL 841
Score = 117 (46.2 bits), Expect = 0.00080, P = 0.00080
Identities = 35/83 (42%), Positives = 50/83 (60%)
Query: 170 EFARYENETEI-LREQLRQREADRERQKQEWELKE----RHAEEQRRCDEEAMRRQTEEI 224
E R + E EI LR RQRE + ERQ+QE L+ R EE+RR EE +R+Q EE
Sbjct: 813 EALRRQREQEIALR---RQRE-EEERQQQEEALRRLEERRREEEERRKQEELLRKQEEEA 868
Query: 225 HLRMQQQDEELRRRHQENSIFMQ 247
+ +++EE +RR +EN + M+
Sbjct: 869 -AKWAREEEEAQRRLEENRLRME 890
>TAIR|locus:2144593 [details] [associations]
symbol:AT5G03710 "AT5G03710" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AL162506
IPI:IPI00539790 PIR:T48398 RefSeq:NP_195991.1
EnsemblPlants:AT5G03710.1 GeneID:831750 KEGG:ath:AT5G03710
TAIR:At5g03710 OMA:EREERAF ProtClustDB:CLSN2916924
Genevestigator:Q9LZR7 Uniprot:Q9LZR7
Length = 81
Score = 96 (38.9 bits), Expect = 0.00016, P = 0.00016
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 169 MEFARYENETEILREQLRQREADRERQKQEWELKERHAEEQRRCDEEAMRRQTEEIHLRM 228
MEF E E E E+ + E + E +++E E +E EE+ +EE + EE
Sbjct: 1 MEFWGEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 60
Query: 229 QQQDEELRRRHQENSIFM 246
++++EE R R + F+
Sbjct: 61 EEEEEEDREREERAFAFV 78
>UNIPROTKB|C9IZL7 [details] [associations]
symbol:NONO "Non-POU domain-containing octamer-binding
protein" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AL590762 HGNC:HGNC:7871 HOGENOM:HOG000231095
IPI:IPI00645966 ProteinModelPortal:C9IZL7 SMR:C9IZL7 STRING:C9IZL7
PRIDE:C9IZL7 Ensembl:ENST00000454976 ArrayExpress:C9IZL7
Bgee:C9IZL7 Uniprot:C9IZL7
Length = 207
Score = 109 (43.4 bits), Expect = 0.00033, P = 0.00033
Identities = 21/34 (61%), Positives = 27/34 (79%)
Query: 3 IERAVVLVDDRGNSKNEGIIEFTRKPAAAQALKR 36
+ERAVV+VDDRG +GI+EF+ KPAA +AL R
Sbjct: 174 VERAVVIVDDRGRPSGKGIVEFSGKPAARKALDR 207
>UNIPROTKB|G3N264 [details] [associations]
symbol:TNNT2 "Troponin T, cardiac muscle" species:9913 "Bos
taurus" [GO:0005861 "troponin complex" evidence=IEA]
InterPro:IPR001978 Pfam:PF00992 GeneTree:ENSGT00390000013611
EMBL:DAAA02043120 Ensembl:ENSBTAT00000065361 Uniprot:G3N264
Length = 126
Score = 92 (37.4 bits), Expect = 0.00044, P = 0.00044
Identities = 26/72 (36%), Positives = 41/72 (56%)
Query: 175 ENETEILREQLRQREADR-ERQK----QEWELKERHAEEQRRCDEEAMRRQTEEIHLRMQ 229
E E L++++ +R A+R E+Q+ +E E + R AEE+ R +EE RR+ E+
Sbjct: 50 EEELVSLKDRIEKRRAERAEQQRIRAEREKERQTRLAEERARREEEESRRKAEDEQEEGS 109
Query: 230 QQDEELRRRHQE 241
Q + LRR H E
Sbjct: 110 VQHDALRRLHPE 121
>ZFIN|ZDB-GENE-040426-1050 [details] [associations]
symbol:ddrgk1 "DDRGK domain containing 1"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS]
ZFIN:ZDB-GENE-040426-1050 GO:GO:0005783 eggNOG:NOG296076
HOGENOM:HOG000005758 InterPro:IPR019153 Pfam:PF09756 CTD:65992
HOVERGEN:HBG051191 OrthoDB:EOG4GTKF5 EMBL:BC065652 IPI:IPI00502000
RefSeq:NP_956587.2 UniGene:Dr.81714 ProteinModelPortal:Q6P0E5
SMR:Q6P0E5 GeneID:393263 KEGG:dre:393263 NextBio:20814322
ArrayExpress:Q6P0E5 Bgee:Q6P0E5 Uniprot:Q6P0E5
Length = 300
Score = 110 (43.8 bits), Expect = 0.00064, P = 0.00064
Identities = 30/75 (40%), Positives = 44/75 (58%)
Query: 181 LREQLRQREADRERQ---KQEWELKERHAEEQRRCDEEAMRRQTEEIHLRMQQQDEELRR 237
LR+Q RQ+E ++ERQ KQE EL +R EEQ R +EE +R E + Q + EEL
Sbjct: 139 LRDQERQKEEEKERQQEQKQEEEL-QRVKEEQERREEEEYQRLKESFIIEDQGEAEELTE 197
Query: 238 RHQENSIFMQVIVWL 252
H+ S+ + I ++
Sbjct: 198 -HESQSLLQEFIQYV 211
>ZFIN|ZDB-GENE-050309-102 [details] [associations]
symbol:itsn2b "intersectin 2b" species:7955 "Danio
rerio" [GO:0035023 "regulation of Rho protein signal transduction"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] Pfam:PF00018 Pfam:PF00169
InterPro:IPR000219 InterPro:IPR000008 InterPro:IPR000261
InterPro:IPR001452 InterPro:IPR001849 InterPro:IPR002048
InterPro:IPR008973 InterPro:IPR011992 InterPro:IPR027029
Pfam:PF00168 Pfam:PF00621 PRINTS:PR00452 PROSITE:PS50002
PROSITE:PS50003 PROSITE:PS50010 PROSITE:PS50031 PROSITE:PS50222
SMART:SM00027 SMART:SM00054 SMART:SM00233 SMART:SM00239
SMART:SM00325 SMART:SM00326 Prosite:PS00018
ZFIN:ZDB-GENE-050309-102 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0005509 Gene3D:1.10.238.10
InterPro:IPR018247 GO:GO:0005622 InterPro:IPR000108 PRINTS:PR00499
SUPFAM:SSF50044 GO:GO:0005089 Gene3D:1.20.900.10 InterPro:IPR018029
SUPFAM:SSF49562 SUPFAM:SSF48065 PROSITE:PS50004 GO:GO:0035023
InterPro:IPR011511 Pfam:PF07653 GeneTree:ENSGT00700000104202
PANTHER:PTHR11216:SF29 EMBL:CR628334 IPI:IPI00505629
RefSeq:NP_001003547.2 UniGene:Dr.26309 ProteinModelPortal:F1R0Z9
Ensembl:ENSDART00000087111 GeneID:445153 KEGG:dre:445153 CTD:445153
NextBio:20831915 ArrayExpress:F1R0Z9 Bgee:F1R0Z9 Uniprot:F1R0Z9
Length = 1741
Score = 118 (46.6 bits), Expect = 0.00084, P = 0.00084
Identities = 31/80 (38%), Positives = 47/80 (58%)
Query: 170 EFARYENETEILREQLRQREADRERQKQEWELKE-RHAEEQRRCDEEAMRRQTEEIHL-R 227
E + E E L E+ R+ E +R+RQ +E LKE R EE+RR +EE R++ E R
Sbjct: 760 ERRKLEEERRKLEEERRKLEDERKRQ-EEIRLKEEREREERRRAEEERRRKEEERREEER 818
Query: 228 MQQQDEELRRRHQENSIFMQ 247
++++EE RRRH+ M+
Sbjct: 819 KREREEEERRRHRAQEAAMR 838
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 279 237 0.00090 113 3 11 22 0.41 33
32 0.43 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 53
No. of states in DFA: 600 (64 KB)
Total size of DFA: 190 KB (2108 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.59u 0.08s 30.67t Elapsed: 00:00:06
Total cpu time: 30.60u 0.08s 30.68t Elapsed: 00:00:06
Start: Thu Aug 15 12:52:16 2013 End: Thu Aug 15 12:52:22 2013