Query psy744
Match_columns 405
No_of_seqs 565 out of 3662
Neff 8.6
Searched_HMMs 29240
Date Fri Aug 16 18:22:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy744.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/744hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t4n_C Nuclear protein SNF4; C 100.0 1.6E-37 5.3E-42 299.1 29.6 273 71-346 16-321 (323)
2 2v8q_E 5'-AMP-activated protei 100.0 1.2E-35 4.1E-40 286.8 27.0 277 70-346 20-324 (330)
3 2qrd_G Protein C1556.08C; AMPK 100.0 4.6E-33 1.6E-37 269.0 29.9 272 74-348 11-318 (334)
4 3kh5_A Protein MJ1225; AMPK, A 100.0 3.1E-31 1E-35 249.2 23.5 240 86-343 4-279 (280)
5 3ddj_A CBS domain-containing p 100.0 7.7E-32 2.6E-36 256.1 17.2 240 84-345 19-285 (296)
6 2yzq_A Putative uncharacterize 100.0 4.9E-30 1.7E-34 241.5 14.3 243 86-345 2-279 (282)
7 3kh5_A Protein MJ1225; AMPK, A 99.9 4E-22 1.4E-26 186.9 17.0 167 166-344 29-204 (280)
8 3ddj_A CBS domain-containing p 99.9 4E-21 1.4E-25 182.1 15.3 183 84-274 92-286 (296)
9 2yzq_A Putative uncharacterize 99.8 5.2E-21 1.8E-25 179.7 13.0 153 166-340 26-179 (282)
10 2v8q_E 5'-AMP-activated protei 99.8 9.2E-20 3.1E-24 175.4 15.6 223 166-400 62-304 (330)
11 4esy_A CBS domain containing m 99.8 2.2E-20 7.7E-25 162.6 9.4 126 211-346 17-163 (170)
12 3t4n_C Nuclear protein SNF4; C 99.8 3.2E-19 1.1E-23 171.0 18.1 181 87-274 116-321 (323)
13 2nyc_A Nuclear protein SNF4; b 99.8 4.8E-19 1.7E-23 149.0 16.1 140 207-346 3-142 (144)
14 2qrd_G Protein C1556.08C; AMPK 99.8 2.8E-19 9.4E-24 172.3 15.2 223 166-399 49-295 (334)
15 2uv4_A 5'-AMP-activated protei 99.8 2.9E-19 1E-23 152.4 13.4 136 209-344 15-150 (152)
16 3k6e_A CBS domain protein; str 99.8 1.9E-19 6.5E-24 154.7 12.2 130 211-346 14-143 (156)
17 3lv9_A Putative transporter; C 99.8 6.3E-19 2.2E-23 149.6 15.3 126 209-346 20-146 (148)
18 3i8n_A Uncharacterized protein 99.8 4.8E-19 1.7E-23 147.0 12.9 124 211-345 5-129 (130)
19 3hf7_A Uncharacterized CBS-dom 99.8 1.1E-18 3.8E-23 145.0 14.7 124 213-345 3-127 (130)
20 3lhh_A CBS domain protein; str 99.8 2.2E-18 7.5E-23 150.3 15.0 125 211-347 41-166 (172)
21 3nqr_A Magnesium and cobalt ef 99.8 7E-19 2.4E-23 145.4 11.2 123 212-345 3-126 (127)
22 4esy_A CBS domain containing m 99.8 3.1E-19 1E-23 155.4 9.0 160 71-274 4-163 (170)
23 3jtf_A Magnesium and cobalt ef 99.8 1E-18 3.5E-23 144.9 11.4 123 211-346 4-127 (129)
24 3kpb_A Uncharacterized protein 99.8 1.6E-18 5.3E-23 141.8 12.1 119 213-345 2-120 (122)
25 3lfr_A Putative metal ION tran 99.8 1.2E-18 4E-23 146.0 9.8 125 212-346 3-128 (136)
26 3oco_A Hemolysin-like protein 99.8 2.5E-18 8.5E-23 146.9 11.4 125 211-347 19-145 (153)
27 3fhm_A Uncharacterized protein 99.8 5.4E-18 1.9E-22 146.6 13.5 134 207-347 19-152 (165)
28 2rih_A Conserved protein with 99.8 8.5E-18 2.9E-22 141.3 13.6 122 211-344 4-127 (141)
29 3fv6_A YQZB protein; CBS domai 99.8 9.8E-18 3.4E-22 144.1 14.1 124 211-345 16-144 (159)
30 2ef7_A Hypothetical protein ST 99.8 1.2E-17 4.3E-22 138.6 14.2 125 211-347 3-127 (133)
31 2p9m_A Hypothetical protein MJ 99.8 1.3E-17 4.6E-22 139.3 14.2 124 211-345 7-136 (138)
32 2yzi_A Hypothetical protein PH 99.8 1.8E-17 6E-22 138.6 14.9 125 211-347 6-131 (138)
33 1pbj_A Hypothetical protein; s 99.8 1.6E-17 5.3E-22 136.3 14.3 121 213-345 2-122 (125)
34 3ocm_A Putative membrane prote 99.8 1.5E-17 5.1E-22 145.3 15.0 124 211-347 35-159 (173)
35 3gby_A Uncharacterized protein 99.8 2.7E-18 9.2E-23 142.0 9.6 123 211-345 4-126 (128)
36 2rc3_A CBS domain; in SITU pro 99.7 1.3E-17 4.6E-22 138.9 13.2 126 213-346 7-132 (135)
37 1pvm_A Conserved hypothetical 99.7 1.4E-17 4.6E-22 146.8 13.7 127 210-345 7-133 (184)
38 4fry_A Putative signal-transdu 99.7 3.3E-17 1.1E-21 140.3 14.9 129 212-348 7-138 (157)
39 3lqn_A CBS domain protein; csg 99.7 1.3E-17 4.6E-22 141.5 12.2 129 210-347 13-145 (150)
40 1y5h_A Hypothetical protein RV 99.7 7.8E-18 2.7E-22 139.9 10.4 122 212-344 8-130 (133)
41 2o16_A Acetoin utilization pro 99.7 3E-17 1E-21 141.3 14.3 124 212-345 5-135 (160)
42 3k2v_A Putative D-arabinose 5- 99.7 2E-17 6.9E-22 140.5 13.0 119 212-341 28-148 (149)
43 4gqw_A CBS domain-containing p 99.7 1.4E-17 4.8E-22 141.2 12.0 128 212-346 5-144 (152)
44 3l2b_A Probable manganase-depe 99.7 2.8E-18 9.6E-23 158.2 8.1 213 84-343 6-242 (245)
45 3k6e_A CBS domain protein; str 99.7 1.5E-17 5.1E-22 142.8 11.9 136 77-274 8-143 (156)
46 1o50_A CBS domain-containing p 99.7 6.4E-17 2.2E-21 138.6 15.3 128 208-346 12-154 (157)
47 3ctu_A CBS domain protein; str 99.7 2E-17 6.8E-22 141.5 11.7 130 210-348 13-145 (156)
48 3sl7_A CBS domain-containing p 99.7 1.6E-17 5.4E-22 145.2 10.2 127 213-346 5-157 (180)
49 3oi8_A Uncharacterized protein 99.7 2.4E-17 8.1E-22 141.3 10.4 118 211-340 37-155 (156)
50 2emq_A Hypothetical conserved 99.7 8.3E-17 2.8E-21 137.6 13.2 130 210-348 9-142 (157)
51 3kxr_A Magnesium transporter, 99.7 9.1E-17 3.1E-21 144.2 13.5 121 211-347 53-176 (205)
52 1yav_A Hypothetical protein BS 99.7 7.8E-17 2.7E-21 138.3 12.3 129 210-347 12-144 (159)
53 3lv9_A Putative transporter; C 99.7 2.9E-16 9.9E-21 133.0 15.1 127 82-274 20-146 (148)
54 1vr9_A CBS domain protein/ACT 99.7 1E-16 3.5E-21 144.7 12.9 159 212-399 13-171 (213)
55 3i8n_A Uncharacterized protein 99.7 1.2E-16 4E-21 132.5 11.8 127 82-273 3-129 (130)
56 3hf7_A Uncharacterized CBS-dom 99.7 6.9E-17 2.3E-21 134.1 10.1 127 85-274 2-128 (130)
57 2pfi_A Chloride channel protei 99.7 3.7E-16 1.3E-20 134.3 14.9 131 211-345 12-147 (164)
58 1vr9_A CBS domain protein/ACT 99.7 1.7E-16 5.7E-21 143.3 12.9 163 84-329 12-175 (213)
59 2j9l_A Chloride channel protei 99.7 3E-16 1E-20 137.8 11.9 130 211-347 10-167 (185)
60 3jtf_A Magnesium and cobalt ef 99.7 1.4E-16 4.7E-21 132.0 9.0 125 83-274 3-127 (129)
61 3kpb_A Uncharacterized protein 99.7 6.7E-16 2.3E-20 126.0 12.4 119 86-273 2-120 (122)
62 3lhh_A CBS domain protein; str 99.7 8.2E-16 2.8E-20 133.9 13.4 127 82-274 39-165 (172)
63 3fv6_A YQZB protein; CBS domai 99.7 9.8E-16 3.4E-20 131.5 13.7 137 74-274 6-145 (159)
64 3oco_A Hemolysin-like protein 99.7 4.6E-16 1.6E-20 132.7 11.4 127 82-274 17-144 (153)
65 3ocm_A Putative membrane prote 99.7 1.1E-15 3.8E-20 133.3 13.4 139 70-275 19-159 (173)
66 2ef7_A Hypothetical protein ST 99.6 2.3E-15 7.9E-20 124.8 14.3 125 83-274 2-126 (133)
67 3lfr_A Putative metal ION tran 99.6 1.3E-16 4.5E-21 133.4 6.5 127 84-274 2-128 (136)
68 3nqr_A Magnesium and cobalt ef 99.6 2.1E-16 7.3E-21 130.3 7.6 124 84-272 2-125 (127)
69 3lqn_A CBS domain protein; csg 99.6 6.4E-16 2.2E-20 131.1 10.7 134 81-274 11-144 (150)
70 2oux_A Magnesium transporter; 99.6 1.1E-15 3.9E-20 144.1 13.4 120 211-346 136-260 (286)
71 2rih_A Conserved protein with 99.6 5E-15 1.7E-19 124.2 15.0 121 85-272 5-127 (141)
72 2d4z_A Chloride channel protei 99.6 2E-15 6.8E-20 139.2 13.2 130 211-344 12-245 (250)
73 2yvy_A MGTE, Mg2+ transporter 99.6 2.2E-15 7.6E-20 141.5 13.7 121 211-347 134-259 (278)
74 2p9m_A Hypothetical protein MJ 99.6 2.1E-15 7.2E-20 125.8 11.6 128 80-273 3-136 (138)
75 3ctu_A CBS domain protein; str 99.6 1.7E-15 5.9E-20 129.3 11.3 135 78-274 9-143 (156)
76 3gby_A Uncharacterized protein 99.6 1.1E-15 3.7E-20 126.2 9.7 124 83-273 3-126 (128)
77 3fhm_A Uncharacterized protein 99.6 1.6E-15 5.6E-20 130.9 10.4 130 82-274 21-151 (165)
78 1pbj_A Hypothetical protein; s 99.6 8.1E-15 2.8E-19 119.9 13.8 122 86-274 2-123 (125)
79 2uv4_A 5'-AMP-activated protei 99.6 5.3E-15 1.8E-19 125.8 12.6 130 80-272 18-150 (152)
80 3k2v_A Putative D-arabinose 5- 99.6 3.6E-15 1.2E-19 126.5 11.4 130 75-269 19-148 (149)
81 2rc3_A CBS domain; in SITU pro 99.6 4.9E-15 1.7E-19 123.2 11.6 125 86-274 7-132 (135)
82 4gqw_A CBS domain-containing p 99.6 2.5E-15 8.4E-20 127.2 9.8 142 83-274 3-144 (152)
83 2o16_A Acetoin utilization pro 99.6 5.4E-15 1.9E-19 127.0 11.9 132 84-273 4-135 (160)
84 2yzi_A Hypothetical protein PH 99.6 9.4E-15 3.2E-19 121.9 12.8 127 82-274 4-130 (138)
85 3kxr_A Magnesium transporter, 99.6 2.3E-14 7.7E-19 128.5 15.3 134 71-275 38-176 (205)
86 3oi8_A Uncharacterized protein 99.6 1.5E-15 5.1E-20 130.0 7.2 121 82-268 35-155 (156)
87 2nyc_A Nuclear protein SNF4; b 99.6 1.5E-14 5.3E-19 121.2 12.7 129 84-273 7-141 (144)
88 1y5h_A Hypothetical protein RV 99.6 4.2E-15 1.4E-19 123.2 8.8 126 81-272 4-130 (133)
89 1o50_A CBS domain-containing p 99.6 4.2E-14 1.4E-18 120.9 15.3 141 82-274 13-154 (157)
90 3sl7_A CBS domain-containing p 99.6 7.3E-15 2.5E-19 128.1 9.9 154 85-274 4-157 (180)
91 2emq_A Hypothetical conserved 99.6 1.2E-14 4.1E-19 124.0 10.5 133 82-274 8-140 (157)
92 3pc3_A CG1753, isoform A; CBS, 99.6 1.2E-14 4.2E-19 148.5 12.5 127 209-347 381-513 (527)
93 2j9l_A Chloride channel protei 99.6 3.2E-14 1.1E-18 124.7 13.3 155 80-274 6-166 (185)
94 4fry_A Putative signal-transdu 99.6 1.4E-14 4.9E-19 123.7 10.5 127 85-275 7-137 (157)
95 1pvm_A Conserved hypothetical 99.6 2.7E-14 9.1E-19 125.6 12.1 125 85-273 9-133 (184)
96 2d4z_A Chloride channel protei 99.5 7.6E-14 2.6E-18 128.6 14.9 176 83-273 11-246 (250)
97 2pfi_A Chloride channel protei 99.5 7.1E-14 2.4E-18 119.9 13.1 134 83-274 11-148 (164)
98 2zy9_A Mg2+ transporter MGTE; 99.5 4.3E-14 1.5E-18 142.3 13.1 120 211-346 154-278 (473)
99 1yav_A Hypothetical protein BS 99.5 2.2E-14 7.4E-19 122.9 9.3 133 82-274 11-143 (159)
100 3org_A CMCLC; transporter, tra 99.5 6.3E-15 2.1E-19 153.6 3.2 133 210-344 451-624 (632)
101 3usb_A Inosine-5'-monophosphat 99.5 2E-13 6.7E-18 138.4 13.2 112 222-345 120-234 (511)
102 2oux_A Magnesium transporter; 99.5 2.9E-13 9.9E-18 127.6 12.9 131 73-274 123-260 (286)
103 2yvy_A MGTE, Mg2+ transporter 99.4 1.1E-12 3.9E-17 122.9 13.7 120 84-274 134-258 (278)
104 4fxs_A Inosine-5'-monophosphat 99.4 1.6E-13 5.4E-18 138.6 5.5 117 213-344 90-208 (496)
105 1zfj_A Inosine monophosphate d 99.4 1.5E-12 5E-17 132.0 12.5 117 214-345 92-211 (491)
106 3pc3_A CG1753, isoform A; CBS, 99.4 1.6E-12 5.6E-17 132.7 11.7 126 82-274 381-512 (527)
107 1me8_A Inosine-5'-monophosphat 99.4 7.1E-14 2.4E-18 141.7 0.5 115 222-347 104-223 (503)
108 1vrd_A Inosine-5'-monophosphat 99.3 1.3E-13 4.5E-18 139.8 1.5 119 213-346 96-216 (494)
109 2zy9_A Mg2+ transporter MGTE; 99.3 1E-11 3.6E-16 124.9 14.2 129 75-274 143-278 (473)
110 4avf_A Inosine-5'-monophosphat 99.3 1.6E-13 5.6E-18 138.4 -0.2 117 213-345 89-207 (490)
111 1me8_A Inosine-5'-monophosphat 99.3 5.4E-13 1.8E-17 135.2 3.5 165 80-323 91-260 (503)
112 4af0_A Inosine-5'-monophosphat 99.3 1.6E-13 5.6E-18 135.8 -0.5 110 222-344 145-257 (556)
113 3usb_A Inosine-5'-monophosphat 99.3 4.6E-11 1.6E-15 121.0 17.4 160 87-328 115-279 (511)
114 3org_A CMCLC; transporter, tra 99.3 3.5E-12 1.2E-16 132.9 8.5 172 83-272 451-624 (632)
115 1jcn_A Inosine monophosphate d 99.2 2.5E-13 8.7E-18 138.3 -4.9 132 189-344 96-232 (514)
116 2cu0_A Inosine-5'-monophosphat 99.1 3.8E-12 1.3E-16 128.6 0.1 107 223-344 101-207 (486)
117 1zfj_A Inosine monophosphate d 99.1 1.3E-09 4.4E-14 110.3 18.6 116 88-273 93-211 (491)
118 4fxs_A Inosine-5'-monophosphat 99.1 6.7E-11 2.3E-15 119.4 6.0 119 86-272 90-208 (496)
119 4avf_A Inosine-5'-monophosphat 99.1 5.8E-11 2E-15 119.7 5.4 119 85-272 88-206 (490)
120 1vrd_A Inosine-5'-monophosphat 99.1 5.9E-11 2E-15 120.3 5.3 119 86-274 96-216 (494)
121 3ghd_A A cystathionine beta-sy 99.1 3E-10 1E-14 83.2 6.7 70 224-300 1-70 (70)
122 4af0_A Inosine-5'-monophosphat 99.0 6E-11 2.1E-15 117.6 0.0 109 96-272 147-257 (556)
123 2cu0_A Inosine-5'-monophosphat 98.9 3.6E-10 1.2E-14 114.1 3.8 163 88-335 96-258 (486)
124 1jcn_A Inosine monophosphate d 98.9 9.9E-11 3.4E-15 119.1 -2.1 121 85-272 108-232 (514)
125 3ghd_A A cystathionine beta-sy 98.8 1.4E-08 4.8E-13 74.2 7.3 48 297-345 2-49 (70)
126 3fio_A A cystathionine beta-sy 98.8 1.3E-08 4.4E-13 74.0 6.7 62 224-286 1-62 (70)
127 3l2b_A Probable manganase-depe 98.8 1.9E-08 6.5E-13 92.0 8.8 174 211-399 6-224 (245)
128 3fio_A A cystathionine beta-sy 98.6 1.1E-07 3.6E-12 69.0 7.2 48 297-345 2-49 (70)
129 1tif_A IF3-N, translation init 59.0 21 0.00073 25.6 5.5 30 246-275 13-42 (78)
130 1tif_A IF3-N, translation init 50.8 24 0.00081 25.4 4.6 28 318-345 13-40 (78)
131 1svj_A Potassium-transporting 31.8 16 0.00053 30.1 1.2 35 305-340 120-154 (156)
132 3fan_A Non-structural protein; 23.2 38 0.0013 29.3 2.1 24 317-340 125-148 (213)
133 1p0z_A Sensor kinase CITA; tra 22.2 59 0.002 25.2 3.0 26 234-259 37-63 (131)
134 3by8_A Sensor protein DCUS; hi 21.5 60 0.002 25.7 3.0 27 232-258 41-68 (142)
135 1p0z_A Sensor kinase CITA; tra 21.2 66 0.0023 24.9 3.2 17 249-265 106-122 (131)
136 3by8_A Sensor protein DCUS; hi 20.4 68 0.0023 25.3 3.1 22 248-269 110-131 (142)
No 1
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=100.00 E-value=1.6e-37 Score=299.06 Aligned_cols=273 Identities=35% Similarity=0.642 Sum_probs=226.6
Q ss_pred ccchhHHHHHHhhhcccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCC
Q psy744 71 KDGGNQIFVKFFKFHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTS 150 (405)
Q Consensus 71 ~~~~~~~~~~~l~~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~ 150 (405)
++...+.+.+||+.++|||+||.+.++++++.+.++.+|++.|.+++++++||||++.++++|++|..|++..+..++..
T Consensus 16 ~~~~~~~i~~~l~~~~~~d~m~~~~~~v~v~~~~sv~~a~~~m~~~~~~~~pV~d~~~~~lvGilt~~Dl~~~l~~~~~~ 95 (323)
T 3t4n_C 16 QQLAVESIRKFLNSKTSYDVLPVSYRLIVLDTSLLVKKSLNVLLQNSIVSAPLWDSKTSRFAGLLTTTDFINVIQYYFSN 95 (323)
T ss_dssp HHHHHHHHHHHHHHSBHHHHSCSEEEEEEEETTSBHHHHHHHHHHTTCSCEEEEETTTTEEEEEECHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCchHhhCCCCCcEEEEcCCCcHHHHHHHHHHcCCceEEEEeCCCCeEEEEEEHHHHHHHHHHHHcC
Confidence 34457888899999999999999999999999999999999999999999999998767999999999999987654332
Q ss_pred CCC----------CHHHHhh---------------c---cHHHHHHhcCCCEEEEEeCCCC-----EEEEEeHHHHHHHH
Q psy744 151 SSI----------TMEELEE---------------H---KLETNLIDYKIHRLPVIDEMGN-----VLYILTHKRILRFL 197 (405)
Q Consensus 151 ~~~----------~~~~l~~---------------~---~i~~~l~~~~i~~lpVvd~~~~-----vvgilt~~dIl~~l 197 (405)
+.. .+.++.. . .+...|.+++++++||+|+++. ++|++|.+|+++++
T Consensus 96 ~~~~~~l~~~~~~~v~~i~~~~~~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~Givt~~di~~~l 175 (323)
T 3t4n_C 96 PDKFELVDKLQLDGLKDIERALGVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVSVLTQYRILKFV 175 (323)
T ss_dssp GGGGGGGGGCBHHHHHHHHHHTTC----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEEEEEHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHhCCCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEEEecHHHHHHHH
Confidence 210 0111110 0 1122789999999999997765 99999999999998
Q ss_pred HHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhcccc
Q psy744 198 FLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYT 277 (405)
Q Consensus 198 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~~ 277 (405)
..+... ..+...++++++.++.++++++.+++++.++++.|.+++++++||+|++|+++|+||.+|+++++..+.+.
T Consensus 176 ~~~~~~---~~~~~~~v~~~~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~~~ 252 (323)
T 3t4n_C 176 ALNCRE---THFLKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGIYN 252 (323)
T ss_dssp HHHCGG---GGGCCSBGGGTTCSBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETTHHHHHHHTTHHH
T ss_pred HhcCCc---hhhhhCcHHHcCCCCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHhhchhh
Confidence 765432 33456689999554468899999999999999999999999999999999999999999999988766444
Q ss_pred chhhhHHHhhhccccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhC
Q psy744 278 NLDVTLKEANEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVLK 346 (405)
Q Consensus 278 ~l~~~v~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~~ 346 (405)
.+..++.++|........++.+|++++++.++++.|.+++++++||+|++|+++|+||.+||++++..+
T Consensus 253 ~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~~~l~Giit~~Dil~~l~~~ 321 (323)
T 3t4n_C 253 DLSLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYILLG 321 (323)
T ss_dssp HTTSBHHHHGGGSCTTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEECTTSBEEEEEEHHHHHHHHHHC
T ss_pred hccCCHHHHHhhccccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEECCCCcEEEEEEHHHHHHHHHhc
Confidence 556678888653222223789999999999999999999999999999899999999999999999854
No 2
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=100.00 E-value=1.2e-35 Score=286.82 Aligned_cols=277 Identities=59% Similarity=0.954 Sum_probs=229.3
Q ss_pred hccchhHHHHHHhhhcccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhC
Q psy744 70 EKDGGNQIFVKFFKFHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYT 149 (405)
Q Consensus 70 ~~~~~~~~~~~~l~~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~ 149 (405)
+.+.+.+.|++||+..+|+|+|+.+.++++++++.++.+|++.|.+++++++||+|++.++++|++|..|++..+.....
T Consensus 20 ~~~~~~~~~~~~l~~~~v~dim~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll~~l~~~~~ 99 (330)
T 2v8q_E 20 TPESNSSVYTTFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRYYK 99 (330)
T ss_dssp ---CCSCHHHHHHHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHHHHHHHHHH
T ss_pred ccchhhHHHHHHHHcCcHhhhccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHHHHHHHHHh
Confidence 45566888999999999999999999999999999999999999999999999999876799999999999987654321
Q ss_pred CC--------CCCHHHHh-------h------------ccHHHHHHhcCCCEEEEEeC-CCCEEEEEeHHHHHHHHHHhh
Q psy744 150 SS--------SITMEELE-------E------------HKLETNLIDYKIHRLPVIDE-MGNVLYILTHKRILRFLFLYI 201 (405)
Q Consensus 150 ~~--------~~~~~~l~-------~------------~~i~~~l~~~~i~~lpVvd~-~~~vvgilt~~dIl~~l~~~~ 201 (405)
.+ ......+. . ..+...|.+++++++||+|+ +|+++|++|..|+++++....
T Consensus 100 ~~~~~~~~l~~~~~~~~~~~~~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~~dl~~~~~~~~ 179 (330)
T 2v8q_E 100 SALVQIYELEEHKIETWREVYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTHKRILKFLKLFI 179 (330)
T ss_dssp HHTTTCCCGGGCBHHHHHHHHSSSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTTCCEEEEECHHHHHHHHHHHS
T ss_pred ccccchhHHhhccHHHHHHHHhhcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCCCcEEEEEcHHHHHHHHHHHh
Confidence 10 01111111 0 01223788999999999997 899999999999999887665
Q ss_pred CCCCCccccccccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhccccchhh
Q psy744 202 NDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDV 281 (405)
Q Consensus 202 ~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~~~l~~ 281 (405)
...+...++..+++++.++..+++.++.+++++.++++.|.+++++++||+|++|+++|+||.+|+++......+..++.
T Consensus 180 ~~~~~~~~~~~~v~~~~v~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~l~Giit~~dl~~~~~~~~~~~~~~ 259 (330)
T 2v8q_E 180 TEFPKPEFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDV 259 (330)
T ss_dssp CSSSCCGGGGSBHHHHTCSBCSSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEGGGTGGGGGSSCCCCCSS
T ss_pred hccCchhhhcCCHHHhcccCcCCceEECCCCCHHHHHHHHHHcCCCeEEEECCCCcEEEEEEHHHHHHHHhccccccccC
Confidence 54434455667777875443368899999999999999999999999999998899999999999998876554444567
Q ss_pred hHHHhhhccccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhC
Q psy744 282 TLKEANEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVLK 346 (405)
Q Consensus 282 ~v~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~~ 346 (405)
++.+++..+..|.+++.++.+++++.++++.|.+++++++||+|++|+++|+||..||++++...
T Consensus 260 ~v~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~l~Giit~~Dil~~~~~~ 324 (330)
T 2v8q_E 260 SVTKALQHRSHYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDEHDVVKGIVSLSDILQALVLT 324 (330)
T ss_dssp BHHHHGGGCCSCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHSS
T ss_pred cHHHHHhccccccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEcCCCcEEEEEeHHHHHHHHHhh
Confidence 88888765556678999999999999999999999999999999889999999999999999854
No 3
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=100.00 E-value=4.6e-33 Score=269.01 Aligned_cols=272 Identities=33% Similarity=0.628 Sum_probs=218.0
Q ss_pred hhHHHHHHhhhcccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhC---C
Q psy744 74 GNQIFVKFFKFHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYT---S 150 (405)
Q Consensus 74 ~~~~~~~~l~~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~---~ 150 (405)
-.+.+.+|+..++|+|+|+.+.++++++++.++.+|++.|.+++++++||+|++.++++|++|..|++.++...+. .
T Consensus 11 ~~~~~~~~l~~~~v~dim~~~~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~~~~~~~~~~ 90 (334)
T 2qrd_G 11 ALKEIQAFIRSRTSYDVLPTSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNVIKYYYQSSSF 90 (334)
T ss_dssp HHHHHHHHHHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHhcCchhhhCCCCCCEEEEcCCCCHHHHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHHHHHhhccCC
Confidence 4677888999999999999888999999999999999999999999999999876899999999999987754321 1
Q ss_pred C-------CCCHHHHhh---------------------ccHHHHHHhcCCCEEEEEeCCC-C----EEEEEeHHHHHHHH
Q psy744 151 S-------SITMEELEE---------------------HKLETNLIDYKIHRLPVIDEMG-N----VLYILTHKRILRFL 197 (405)
Q Consensus 151 ~-------~~~~~~l~~---------------------~~i~~~l~~~~i~~lpVvd~~~-~----vvgilt~~dIl~~l 197 (405)
+ ......+.+ ..+...|.+++++++||+|++| + ++|++|.+|+++++
T Consensus 91 ~~~~~~~~~~~~~~i~~~l~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Givt~~dl~~~~ 170 (334)
T 2qrd_G 91 PEAIAEIDKFRLLGLREVERKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSVLTQYRILKFI 170 (334)
T ss_dssp GGGGGGGGSCBHHHHHHHHHHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEEEEEEHHHHHHHH
T ss_pred ccHHHHHhhhchhhHHHHHHhhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCcCccceEEEeeHHHHHHHH
Confidence 1 112222210 0112378899999999999655 4 99999999999988
Q ss_pred HHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhcccc
Q psy744 198 FLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYT 277 (405)
Q Consensus 198 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~~ 277 (405)
.....+ ..+...++++++..+.+++.++.+++++.++++.|.+++++++||+|++|+++|+||.+|+++.+..+.+.
T Consensus 171 ~~~~~~---~~~~~~~v~~l~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~ 247 (334)
T 2qrd_G 171 SMNCKE---TAMLRVPLNQMTIGTWSNLATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVYESVDVMHLIQDGDYS 247 (334)
T ss_dssp HHHCGG---GGGCCCBGGGSSCSBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETHHHHHHHTTSCGG
T ss_pred Hhhccc---hhhhhCcHHHhCCcccCCceEECCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEHHHHHHHhhccccc
Confidence 653221 12334577885322247889999999999999999999999999999889999999999999988765434
Q ss_pred chhhhHHHhhhccccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhCCC
Q psy744 278 NLDVTLKEANEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVLKPS 348 (405)
Q Consensus 278 ~l~~~v~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~~~~ 348 (405)
....++.++|.......+++.+|++++++.++++.|.+++++++||+|++|+++|+||..||++++.....
T Consensus 248 ~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~l~Giit~~dil~~~~~~~~ 318 (334)
T 2qrd_G 248 NLDLSVGEALLKRPANFDGVHTCRATDRLDGIFDAIKHSRVHRLFVVDENLKLEGILSLADILNYIIYDKT 318 (334)
T ss_dssp GGGSBHHHHHTTCCTTCCCCCEECTTCBHHHHHHHHHHSCCCEEEEECTTCBEEEEEEHHHHHHHHHSCCC
T ss_pred cccCcHHHHHhcccccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHHhccc
Confidence 45667777754110001478899999999999999999999999999988999999999999999986543
No 4
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.98 E-value=3.1e-31 Score=249.23 Aligned_cols=240 Identities=20% Similarity=0.327 Sum_probs=192.1
Q ss_pred ccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhC--------C------C
Q psy744 86 KCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYT--------S------S 151 (405)
Q Consensus 86 ~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~--------~------~ 151 (405)
++.+++. +++++++++++++.+|+++|.+++++++||+|++.++++|++|..|++.++..... . .
T Consensus 4 ~v~~~i~-~~~~~~v~~~~sl~~a~~~m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (280)
T 3kh5_A 4 RVMKIAQ-NKKIVTVYPTTTIRKALMTMNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSKYNLIREKHERNFLAAI 82 (280)
T ss_dssp BGGGTSC-CSCCCCBCTTSBHHHHHHHHHHHCCCEEEEECTTTCBEEEEEEHHHHHHHTTTSGGGHHHHTTSTTCHHHHT
T ss_pred hHHHHhc-CCCcEEECCCCcHHHHHHHHHhCCCcEeeEEECCCCeEEEEEEHHHHHHHhcccchhhhhhhccccchhHHh
Confidence 4445543 34899999999999999999999999999999744899999999999987632110 0 0
Q ss_pred CCCHHHHhhc------------cHHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccc
Q psy744 152 SITMEELEEH------------KLETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKI 219 (405)
Q Consensus 152 ~~~~~~l~~~------------~i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~ 219 (405)
..++.++... .+...|.+++++++||+|++|+++|++|.+|+++.+..... ...+++++|
T Consensus 83 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~-------~~~~v~~~m- 154 (280)
T 3kh5_A 83 NEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRALLDKID-------ENEVIDDYI- 154 (280)
T ss_dssp TSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHGGGSC-------TTCBSGGGC-
T ss_pred hhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHHHHHhhcCC-------CCCCHHHHh-
Confidence 1112222111 12238899999999999999999999999999998765332 133788888
Q ss_pred cccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhccc----------cchhhhHHHhhhc
Q psy744 220 GTYENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTY----------TNLDVTLKEANEH 289 (405)
Q Consensus 220 ~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~----------~~l~~~v~~~~~~ 289 (405)
.+++.++.+++++.++++.|.+++++++||+ ++|+++|+||.+|+++.+..... ...+.++.++
T Consensus 155 --~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--- 228 (280)
T 3kh5_A 155 --TRDVIVATPGERLKDVARTMVRNGFRRLPVV-SEGRLVGIITSTDFIKLLGSDWAFNHMQTGNVREITNVRMEEI--- 228 (280)
T ss_dssp --BCSCCCBCTTCBHHHHHHHHHHHTCSEEEEE-ETTEEEEEEEHHHHHHHHTSHHHHHHHHSCCTHHHHHCBHHHH---
T ss_pred --CCCCeEECCCCcHHHHHHHHHHcCCCEEEEE-ECCEEEEEEEHHHHHHHHhhhhhhhhhcccchhhhhCCcHHHH---
Confidence 3788999999999999999999999999999 57999999999999988754310 0023445555
Q ss_pred cccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHH
Q psy744 290 KTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYL 343 (405)
Q Consensus 290 ~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l 343 (405)
|.+++.++++++++.+|++.|.+++++++||+|++|+++|+||.+||++++
T Consensus 229 ---m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Givt~~dil~~l 279 (280)
T 3kh5_A 229 ---MKRDVITAKEGDKLKKIAEIMVTNDIGALPVVDENLRIKGIITEKDVLKYF 279 (280)
T ss_dssp ---SBSSCCCBCTTCBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHGGGG
T ss_pred ---hcCCCEEECCCCCHHHHHHHHHHCCCCEEEEECCCCeEEEEEeHHHHHHhh
Confidence 568899999999999999999999999999999889999999999999876
No 5
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.98 E-value=7.7e-32 Score=256.06 Aligned_cols=240 Identities=16% Similarity=0.212 Sum_probs=196.7
Q ss_pred hcccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhh----------CCCCC
Q psy744 84 FHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYY----------TSSSI 153 (405)
Q Consensus 84 ~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~----------~~~~~ 153 (405)
..++.|+| +.+++++++++++.+|++.|.+++++++||+| ++++|++|..|+++.+.... .....
T Consensus 19 ~~~V~dim--~~~~~~v~~~~~v~~a~~~m~~~~~~~~~V~d---~~l~GivT~~Di~~~~~~~~~~~~~~~~~~~~~~~ 93 (296)
T 3ddj_A 19 GMNIETLM--IKNPPILSKEDRLGSAFKKINEGGIGRIIVAN---EKIEGLLTTRDLLSTVESYCKDSCSQGDLYHISTT 93 (296)
T ss_dssp CSSGGGTC--EESCCEECTTSBHHHHHHHTTGGGCCEEEEES---SSEEEEEEHHHHHGGGTTCC---CCHHHHHHHHTS
T ss_pred ccCHHHhc--cCCCcEECCCccHHHHHHHHHHCCCceEEEEC---CeEEEEEeHHHHHHHhcccccccccchhhHHHhcc
Confidence 56888999 66899999999999999999999999999999 79999999999998763110 00011
Q ss_pred CHHHHhhc------------cHHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccc
Q psy744 154 TMEELEEH------------KLETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGT 221 (405)
Q Consensus 154 ~~~~l~~~------------~i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~ 221 (405)
++.++... .+...|.+++++++||+|++|+++|++|..|+++.+.... ...+++++|
T Consensus 94 ~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~lvGivt~~dl~~~~~~~~--------~~~~v~~~m--- 162 (296)
T 3ddj_A 94 PIIDYMTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIVTEREFLLLYKDLD--------EIFPVKVFM--- 162 (296)
T ss_dssp BGGGTSEESCCCEETTSCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHGGGGGGSC--------CCCBHHHHS---
T ss_pred cHHHhccCCCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHhhhccc--------ccccHHHhh---
Confidence 12221110 1223889999999999998999999999999997664321 234788888
Q ss_pred cCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhcccc-----chhhhHHHhhhccccCccC
Q psy744 222 YENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYT-----NLDVTLKEANEHKTDWFEG 296 (405)
Q Consensus 222 ~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~~-----~l~~~v~~~~~~~~~~~~~ 296 (405)
.+++.++.+++++.++++.|.+++++++||+|++|+++|+||..|+++.+...... ....++.++ |.++
T Consensus 163 ~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~v~~~------m~~~ 236 (296)
T 3ddj_A 163 STKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLAKAVDKLDPDYFYGKVVKDV------MVTN 236 (296)
T ss_dssp BCSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHHHHTCTHHHHTCBHHHH------SBCC
T ss_pred cCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHHhhcChhhhcCcCHHHH------hCCC
Confidence 37889999999999999999999999999999999999999999999887643110 123345555 6678
Q ss_pred ceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHh
Q psy744 297 VEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVL 345 (405)
Q Consensus 297 ~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~ 345 (405)
+.+|.+++++.+|++.|.+++++++||+|++|+++|+||.+||++++..
T Consensus 237 ~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~Dil~~l~~ 285 (296)
T 3ddj_A 237 LVTIDELASVNRAAAEMIVKRIGSLLILNKDNTIRGIITERDLLIALHH 285 (296)
T ss_dssp CCBCCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHH
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEcHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999974
No 6
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.96 E-value=4.9e-30 Score=241.53 Aligned_cols=243 Identities=19% Similarity=0.250 Sum_probs=173.1
Q ss_pred ccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHh-----hCC------CCCC
Q psy744 86 KCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMY-----YTS------SSIT 154 (405)
Q Consensus 86 ~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~-----~~~------~~~~ 154 (405)
++.|+| +.++++++++.++.+|++.|.+++++++||+|++ ++++|++|..|++..+... +.. +..+
T Consensus 2 ~v~~im--~~~~~~v~~~~~~~~a~~~~~~~~~~~~pV~d~~-~~~~Giv~~~dl~~~~~~~~v~~~m~~~~~~v~~~~~ 78 (282)
T 2yzq_A 2 RVKTIM--TQNPVTITLPATRNYALELFKKYKVRSFPVVNKE-GKLVGIISVKRILVNPDEEQLAMLVKRDVPVVKENDT 78 (282)
T ss_dssp BHHHHS--EESCCCEESSCC------------CCEEEEECTT-CCEEEEEESSCC----------CCCBSCCCEEETTSB
T ss_pred chHHhc--cCCCeEECCCCcHHHHHHHHHHcCCCeEEEEcCC-CcEEEEEEHHHHHhhhccCCHHHHcCCCCcEECCCCc
Confidence 456777 4678999999999999999999999999999975 8999999999998665321 111 1112
Q ss_pred HHHHhhccHHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHH-HHHHhhCCCCCccccccccccccccccCCeeEEcCCCC
Q psy744 155 MEELEEHKLETNLIDYKIHRLPVIDEMGNVLYILTHKRILR-FLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETS 233 (405)
Q Consensus 155 ~~~l~~~~i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~-~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~ 233 (405)
+.++ ...|.+++++++||+|++|+++|++|..|+++ ++... ......+++++| .+++.++.++++
T Consensus 79 l~~a-----~~~m~~~~~~~~~Vvd~~~~~~Giit~~di~~~~~~~~------~~~~~~~v~~~m---~~~~~~v~~~~~ 144 (282)
T 2yzq_A 79 LKKA-----AKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRYFAKS------EKYKGVEIEPYY---QRYVSIVWEGTP 144 (282)
T ss_dssp HHHH-----HHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTC------SGGGGCBSTTTS---BSCCCCEETTSB
T ss_pred HHHH-----HHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHhcc------CCcccCcHHHHh---CCCCEEECCCCC
Confidence 2222 23889999999999998899999999999998 65421 112345778888 378899999999
Q ss_pred HHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHH------HHHH------hc--------cccch-hhhHHH--hhhcc
Q psy744 234 IIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVI------NLAA------EK--------TYTNL-DVTLKE--ANEHK 290 (405)
Q Consensus 234 l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~------~~~~------~~--------~~~~l-~~~v~~--~~~~~ 290 (405)
+.++++.|.+++++++||+|++|+++|++|..|++ +... .. ..... ...... -..+.
T Consensus 145 l~~~~~~~~~~~~~~l~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 224 (282)
T 2yzq_A 145 LKAALKALLLSNSMALPVVDSEGNLVGIVDETDLLRDSEIVRIMKSTELAASSEEEWILESHPTLLFEKFELQLPNKPVA 224 (282)
T ss_dssp HHHHHHHHHTCSSSEEEEECTTSCEEEEEEGGGGGGCGGGCC--------------------------------CCCBGG
T ss_pred HHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHhhhhhhhhhhccchhhhhhhhhhhcccchHHHHhHhhhhhccCCHH
Confidence 99999999999999999999889999999999998 4332 00 00000 000000 01234
Q ss_pred ccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHh
Q psy744 291 TDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVL 345 (405)
Q Consensus 291 ~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~ 345 (405)
+.|.+++.++++++++.+|+++|.+++++++||+|++|+++|+||.+||++++..
T Consensus 225 ~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~lvGiit~~Dil~~~~~ 279 (282)
T 2yzq_A 225 EIMTRDVIVATPHMTVHEVALKMAKYSIEQLPVIRGEGDLIGLIRDFDLLKVLVK 279 (282)
T ss_dssp GTCBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEETTTEEEEEEEHHHHGGGGCC
T ss_pred HhcCCCCceeCCCCCHHHHHHHHHHcCcceeEEECCCCCEEEEEeHHHHHHHHHh
Confidence 5577899999999999999999999999999999987899999999999998863
No 7
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.88 E-value=4e-22 Score=186.91 Aligned_cols=167 Identities=26% Similarity=0.386 Sum_probs=139.1
Q ss_pred HHHhcCCCEEEEEeC-CCCEEEEEeHHHHHHHHHHh-----hCCCCCc---cccccccccccccccCCeeEEcCCCCHHH
Q psy744 166 NLIDYKIHRLPVIDE-MGNVLYILTHKRILRFLFLY-----INDLPKP---SFLNKTLRDLKIGTYENVETVAEETSIIH 236 (405)
Q Consensus 166 ~l~~~~i~~lpVvd~-~~~vvgilt~~dIl~~l~~~-----~~~~~~~---~~~~~~v~~i~~~~~~~~~~v~~~~~l~~ 236 (405)
.|.+++++++||+|+ +|+++|++|.+||++++... ....... .....+++++|. ++++++.+++++.+
T Consensus 29 ~m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~---~~~~~v~~~~~~~~ 105 (280)
T 3kh5_A 29 TMNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSKYNLIREKHERNFLAAINEPVREIME---ENVITLKENADIDE 105 (280)
T ss_dssp HHHHHCCCEEEEECTTTCBEEEEEEHHHHHHHTTTSGGGHHHHTTSTTCHHHHTTSBGGGTSB---CSCCCEETTCBHHH
T ss_pred HHHhCCCcEeeEEECCCCeEEEEEEHHHHHHHhcccchhhhhhhccccchhHHhhhhHHHhcC---CCCEEECCCCCHHH
Confidence 899999999999995 89999999999999876321 1111111 122458888884 68999999999999
Q ss_pred HHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhccccchhhhHHHhhhccccCccCceEecCCCCHHHHHHHHHHc
Q psy744 237 ALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDVTLKEANEHKTDWFEGVEKCLLDETLFTVMERIVRA 316 (405)
Q Consensus 237 a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~ 316 (405)
+++.|.+++++++||+|++|+++|++|.+|+++.+...... ..++.+ .|.+++.++++++++.++++.|.++
T Consensus 106 a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~--~~~v~~------~m~~~~~~v~~~~~l~~~~~~~~~~ 177 (280)
T 3kh5_A 106 AIETFLTKNVGGAPIVNDENQLISLITERDVIRALLDKIDE--NEVIDD------YITRDVIVATPGERLKDVARTMVRN 177 (280)
T ss_dssp HHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHGGGSCT--TCBSGG------GCBCSCCCBCTTCBHHHHHHHHHHH
T ss_pred HHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHHHHHhhcCCC--CCCHHH------HhCCCCeEECCCCcHHHHHHHHHHc
Confidence 99999999999999999999999999999999887655321 223444 3668899999999999999999999
Q ss_pred CCCEEEEEcCCCcEEEEEeHHHHHHHHH
Q psy744 317 EVHRLVVVDEDDHVLGVLSLSDILVYLV 344 (405)
Q Consensus 317 ~~~~lpVvd~~g~lvGiIt~~DIl~~l~ 344 (405)
+++++||+ ++|+++|+||.+||++++.
T Consensus 178 ~~~~~~Vv-~~~~~~Givt~~dl~~~~~ 204 (280)
T 3kh5_A 178 GFRRLPVV-SEGRLVGIITSTDFIKLLG 204 (280)
T ss_dssp TCSEEEEE-ETTEEEEEEEHHHHHHHHT
T ss_pred CCCEEEEE-ECCEEEEEEEHHHHHHHHh
Confidence 99999999 5899999999999999985
No 8
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.86 E-value=4e-21 Score=182.08 Aligned_cols=183 Identities=18% Similarity=0.239 Sum_probs=150.1
Q ss_pred hcccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHhhc--
Q psy744 84 FHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEEH-- 161 (405)
Q Consensus 84 ~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~~-- 161 (405)
..++.++| +.+++++.++.++.+|++.|.+++++.+||+|++ ++++|++|..|+++.+.... ...++.++...
T Consensus 92 ~~~v~~im--~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~-~~lvGivt~~dl~~~~~~~~--~~~~v~~~m~~~~ 166 (296)
T 3ddj_A 92 TTPIIDYM--TPNPVTVYNTSDEFTAINIMVTRNFGSLPVVDIN-DKPVGIVTEREFLLLYKDLD--EIFPVKVFMSTKV 166 (296)
T ss_dssp TSBGGGTS--EESCCCEETTSCHHHHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHGGGGGGSC--CCCBHHHHSBCSC
T ss_pred cccHHHhc--cCCCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHhhhccc--ccccHHHhhcCCC
Confidence 56899999 5578999999999999999999999999999987 89999999999997654221 11223332211
Q ss_pred ----------cHHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCC
Q psy744 162 ----------KLETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEE 231 (405)
Q Consensus 162 ----------~i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~ 231 (405)
.+...|.+++++++||+|++|+++|++|..|+++.+...+..+........++.++| .+++.++.++
T Consensus 167 ~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~v~~~m---~~~~~~v~~~ 243 (296)
T 3ddj_A 167 QTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLAKAVDKLDPDYFYGKVVKDVM---VTNLVTIDEL 243 (296)
T ss_dssp CCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHHHHTCTHHHHTCBHHHHS---BCCCCBCCTT
T ss_pred eEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHHhhcChhhhcCcCHHHHh---CCCCeEECCC
Confidence 122388999999999999999999999999999988754443322333456888888 3788999999
Q ss_pred CCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhc
Q psy744 232 TSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEK 274 (405)
Q Consensus 232 ~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~ 274 (405)
+++.+|++.|.+++++++||+|++|+++|+||..||++++...
T Consensus 244 ~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~Dil~~l~~~ 286 (296)
T 3ddj_A 244 ASVNRAAAEMIVKRIGSLLILNKDNTIRGIITERDLLIALHHI 286 (296)
T ss_dssp SBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHcCCCEEEEECCCCeEEEEEcHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999988764
No 9
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.85 E-value=5.2e-21 Score=179.71 Aligned_cols=153 Identities=24% Similarity=0.330 Sum_probs=120.5
Q ss_pred HHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHHHHHHhcC
Q psy744 166 NLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRKFLERR 245 (405)
Q Consensus 166 ~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~ 245 (405)
.|.+++++++||+|++|+++|++|..|+++.+. +.+++++|. +++.++.+++++.++++.|.+++
T Consensus 26 ~~~~~~~~~~pV~d~~~~~~Giv~~~dl~~~~~------------~~~v~~~m~---~~~~~v~~~~~l~~a~~~m~~~~ 90 (282)
T 2yzq_A 26 LFKKYKVRSFPVVNKEGKLVGIISVKRILVNPD------------EEQLAMLVK---RDVPVVKENDTLKKAAKLMLEYD 90 (282)
T ss_dssp ------CCEEEEECTTCCEEEEEESSCC----------------------CCCB---SCCCEEETTSBHHHHHHHHHHHT
T ss_pred HHHHcCCCeEEEEcCCCcEEEEEEHHHHHhhhc------------cCCHHHHcC---CCCcEECCCCcHHHHHHHHHHcC
Confidence 788899999999998899999999999986442 347888883 56899999999999999999999
Q ss_pred CCEEEEECCCCcEEEEEeHHHHHH-HHHhccccchhhhHHHhhhccccCccCceEecCCCCHHHHHHHHHHcCCCEEEEE
Q psy744 246 VSALPMTDSEGHLVDIFAKFDVIN-LAAEKTYTNLDVTLKEANEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVV 324 (405)
Q Consensus 246 ~~~lpVvd~~g~lvGivt~~Dl~~-~~~~~~~~~l~~~v~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVv 324 (405)
.+.+||+|++|+++|++|..|+++ .+..+. .....++ .+.|..++.++.+++++.++++.|.+++++++||+
T Consensus 91 ~~~~~Vvd~~~~~~Giit~~di~~~~~~~~~-~~~~~~v------~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vv 163 (282)
T 2yzq_A 91 YRRVVVVDSKGKPVGILTVGDIIRRYFAKSE-KYKGVEI------EPYYQRYVSIVWEGTPLKAALKALLLSNSMALPVV 163 (282)
T ss_dssp CSEEEEECTTSCEEEEEEHHHHHHHTTTTCS-GGGGCBS------TTTSBSCCCCEETTSBHHHHHHHHHTCSSSEEEEE
T ss_pred CCEEEEEcCCCEEEEEEEHHHHHHHHHhccC-CcccCcH------HHHhCCCCEEECCCCCHHHHHHHHHHcCCcEEEEE
Confidence 999999998899999999999998 655321 1112233 34466888999999999999999999999999999
Q ss_pred cCCCcEEEEEeHHHHH
Q psy744 325 DEDDHVLGVLSLSDIL 340 (405)
Q Consensus 325 d~~g~lvGiIt~~DIl 340 (405)
|++|+++|+||..|++
T Consensus 164 d~~~~~~Giit~~dl~ 179 (282)
T 2yzq_A 164 DSEGNLVGIVDETDLL 179 (282)
T ss_dssp CTTSCEEEEEEGGGGG
T ss_pred cCCCeEEEEEEHHHHh
Confidence 9889999999999999
No 10
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.82 E-value=9.2e-20 Score=175.42 Aligned_cols=223 Identities=13% Similarity=0.158 Sum_probs=155.9
Q ss_pred HHHhcCCCEEEEEeCC-CCEEEEEeHHHHHHHHHHhhCC--CCCccccc-------cccccccccccCCeeEEcCCCCHH
Q psy744 166 NLIDYKIHRLPVIDEM-GNVLYILTHKRILRFLFLYIND--LPKPSFLN-------KTLRDLKIGTYENVETVAEETSII 235 (405)
Q Consensus 166 ~l~~~~i~~lpVvd~~-~~vvgilt~~dIl~~l~~~~~~--~~~~~~~~-------~~v~~i~~~~~~~~~~v~~~~~l~ 235 (405)
.|.+++++++||++++ ++++|++|.+|++..+...... .....+.. ..++++| .++++++.+++++.
T Consensus 62 ~~~~~~~~~~pV~d~~~~~~vGivt~~Dll~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~im---~~~~~~v~~~~~~~ 138 (330)
T 2v8q_E 62 ALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRYYKSALVQIYELEEHKIETWREVYLQDS---FKPLVCISPNASLF 138 (330)
T ss_dssp HHHHHTCSEEEEEETTTTEEEEEEEHHHHHHHHHHHHHHHTTTCCCGGGCBHHHHHHHHSSSS---CCCCCCBCTTSBHH
T ss_pred HHHHcCCcEEEEEeCCCCeEEEEEEHHHHHHHHHHHHhccccchhHHhhccHHHHHHHHhhcc---cCCceEeCCCCCHH
Confidence 7889999999999966 7899999999999877543210 00111111 1234555 37899999999999
Q ss_pred HHHHHHHhcCCCEEEEECC-CCcEEEEEeHHHHHHHHHhcccc-----chhhhHHHhhhccccCc-cCceEecCCCCHHH
Q psy744 236 HALRKFLERRVSALPMTDS-EGHLVDIFAKFDVINLAAEKTYT-----NLDVTLKEANEHKTDWF-EGVEKCLLDETLFT 308 (405)
Q Consensus 236 ~a~~~m~~~~~~~lpVvd~-~g~lvGivt~~Dl~~~~~~~~~~-----~l~~~v~~~~~~~~~~~-~~~~~v~~~~~l~~ 308 (405)
++++.|.+++++++||+|+ +|+++|+||.+|+++.+...... ....++.++. .|. +++.++.+++++.+
T Consensus 139 ~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~v~~~~----v~~~~~~~~v~~~~~l~~ 214 (330)
T 2v8q_E 139 DAVSSLIRNKIHRLPVIDPESGNTLYILTHKRILKFLKLFITEFPKPEFMSKSLEELQ----IGTYANIAMVRTTTPVYV 214 (330)
T ss_dssp HHHHHHHHHTCSCEEEECTTTCCEEEEECHHHHHHHHHHHSCSSSCCGGGGSBHHHHT----CSBCSSCCCEETTCBHHH
T ss_pred HHHHHHHHCCCCeEEEEeCCCCcEEEEEcHHHHHHHHHHHhhccCchhhhcCCHHHhc----ccCcCCceEECCCCCHHH
Confidence 9999999999999999998 89999999999999887653211 1223444431 133 67889999999999
Q ss_pred HHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhCCCCCCCCccCCCCCCCCCCCCCCcCCcccccccCCccc---c
Q psy744 309 VMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVLKPSDDDIGVDETSSDSEVPVDPDLASSDDKVFEENEEPR---D 385 (405)
Q Consensus 309 a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 385 (405)
+++.|.+++++++||+|++|+++|+||..||++++...............+... .........+..+..+. +
T Consensus 215 ~~~~m~~~~~~~~~Vvd~~~~l~Giit~~dl~~~~~~~~~~~~~~~v~~~~~~~-----~~~~~~~~~v~~~~~l~~a~~ 289 (330)
T 2v8q_E 215 ALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQHR-----SHYFEGVLKCYLHETLEAIIN 289 (330)
T ss_dssp HHHHHHHHCCSEEEEECTTSBEEEEEEGGGTGGGGGSSCCCCCSSBHHHHGGGC-----CSCCCSCCEECTTSBHHHHHH
T ss_pred HHHHHHHcCCCeEEEECCCCcEEEEEEHHHHHHHHhccccccccCcHHHHHhcc-----ccccCCCeEECCCCcHHHHHH
Confidence 999999999999999998899999999999999876431110000000001000 00011222333444444 4
Q ss_pred ccccCcccccccccc
Q psy744 386 YVQNSCWGEVPVSDS 400 (405)
Q Consensus 386 ~~~~~~~~~~~~~~~ 400 (405)
.+.+.+...+||+|.
T Consensus 290 ~m~~~~~~~l~Vvd~ 304 (330)
T 2v8q_E 290 RLVEAEVHRLVVVDE 304 (330)
T ss_dssp HHHHHTCSEEEEECT
T ss_pred HHHHCCCcEEEEEcC
Confidence 556888999999983
No 11
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.82 E-value=2.2e-20 Score=162.59 Aligned_cols=126 Identities=23% Similarity=0.368 Sum_probs=106.9
Q ss_pred ccccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhccccc------------
Q psy744 211 NKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTN------------ 278 (405)
Q Consensus 211 ~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~~~------------ 278 (405)
+.+++++| .++++++.+++++.+|++.|.+++++++||+|++|+++|+||.+|+++.........
T Consensus 17 ~~~V~diM---~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~~~~~~~~~~~~~~~~~~~~~ 93 (170)
T 4esy_A 17 QVPIRDIL---TSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGSIPFWIYEASEILSRAIPAP 93 (170)
T ss_dssp TSBGGGGC---CSCCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGGTCCTTHHHHHHHHTTTSCHH
T ss_pred CCCHHHhc---CCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHHHhhccccchhhhhhhccchh
Confidence 45899999 488999999999999999999999999999999999999999999986543221000
Q ss_pred ---------hhhhHHHhhhccccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhC
Q psy744 279 ---------LDVTLKEANEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVLK 346 (405)
Q Consensus 279 ---------l~~~v~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~~ 346 (405)
...++. +.|.+++++|++++++.+|+++|.+++++++||+| +|+++|+||.+||+++++.+
T Consensus 94 ~~~~~~~~~~~~~v~------~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd-~g~lvGivt~~Dil~~l~~~ 163 (170)
T 4esy_A 94 EVEHLFETGRKLTAS------AVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQ-DGVPVGIVTRRDLLKLLLLE 163 (170)
T ss_dssp HHHHHHHHHTTCBHH------HHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHTTTSCCC
T ss_pred hHHhhhccccccchh------hhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEE-CCEEEEEEEHHHHHHHHHhc
Confidence 011233 44778999999999999999999999999999998 69999999999999998743
No 12
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.82 E-value=3.2e-19 Score=171.04 Aligned_cols=181 Identities=16% Similarity=0.209 Sum_probs=139.8
Q ss_pred cccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCC----eeeeEEeHHHHHHHHHHhhCC---CCCCHHHH-
Q psy744 87 CYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQ----QYVGMLTITDFIKILQMYYTS---SSITMEEL- 158 (405)
Q Consensus 87 ~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~----~~~GilT~~Dil~~l~~~~~~---~~~~~~~l- 158 (405)
+.++| +.++++++++.++.+|++.|.+++++.+||+|++.+ +++|++|..|+++++...... ...++.++
T Consensus 116 ~~~~~--~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~Givt~~di~~~l~~~~~~~~~~~~~v~~~~ 193 (323)
T 3t4n_C 116 ALGVD--QLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVSVLTQYRILKFVALNCRETHFLKIPIGDLN 193 (323)
T ss_dssp HTTC------CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEEEEEHHHHHHHHHHHCGGGGGCCSBGGGTT
T ss_pred HhCCC--CCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEEEecHHHHHHHHHhcCCchhhhhCcHHHcC
Confidence 44555 567899999999999999999999999999998622 399999999999987643211 11123333
Q ss_pred --hh------------ccHHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCcccccccccccccccc--
Q psy744 159 --EE------------HKLETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTY-- 222 (405)
Q Consensus 159 --~~------------~~i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~-- 222 (405)
.. ..+...|.+++++++||+|++|+++|++|..|+++.+..... .....+++++|....
T Consensus 194 ~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~~-----~~~~~~v~~~m~~~~~~ 268 (323)
T 3t4n_C 194 IITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGIY-----NDLSLSVGEALMRRSDD 268 (323)
T ss_dssp CSBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETTHHHHHHHTTHH-----HHTTSBHHHHGGGSCTT
T ss_pred CCCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHhhchh-----hhccCCHHHHHhhcccc
Confidence 11 112238899999999999999999999999999998764221 122457888884210
Q ss_pred -CCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhc
Q psy744 223 -ENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEK 274 (405)
Q Consensus 223 -~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~ 274 (405)
.++.++.+++++.++++.|.+++++++||+|++|+++|+||..|+++++..+
T Consensus 269 ~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~~~l~Giit~~Dil~~l~~~ 321 (323)
T 3t4n_C 269 FEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYILLG 321 (323)
T ss_dssp CCCCEEECTTCBHHHHHHHHHHSCCCEEEEECTTSBEEEEEEHHHHHHHHHHC
T ss_pred CCCCEEECCCCCHHHHHHHHHHhCCCEEEEECCCCcEEEEEEHHHHHHHHHhc
Confidence 1789999999999999999999999999999999999999999999988654
No 13
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.81 E-value=4.8e-19 Score=149.03 Aligned_cols=140 Identities=36% Similarity=0.639 Sum_probs=112.8
Q ss_pred ccccccccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhccccchhhhHHHh
Q psy744 207 PSFLNKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDVTLKEA 286 (405)
Q Consensus 207 ~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~ 286 (405)
..++++++++++..+.++++++.+++++.+|++.|.+++++++||+|++|+++|+++..|+++....+.+.....++.++
T Consensus 3 ~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~ 82 (144)
T 2nyc_A 3 THFLKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGIYNDLSLSVGEA 82 (144)
T ss_dssp CGGGGSBGGGSSCCBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHTC----CCSBHHHH
T ss_pred cchhhcchhhcCCCCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhcccccccCCccHHHH
Confidence 44567788996544468899999999999999999999999999999889999999999999887654322335567776
Q ss_pred hhccccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhC
Q psy744 287 NEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVLK 346 (405)
Q Consensus 287 ~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~~ 346 (405)
|........++.++++++++.++++.|.+++.+++||+|++|+++|+||..||++++..+
T Consensus 83 m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~~ 142 (144)
T 2nyc_A 83 LMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYILLG 142 (144)
T ss_dssp HHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHHC
T ss_pred HhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHHhc
Confidence 531100012678999999999999999999999999999889999999999999999754
No 14
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.81 E-value=2.8e-19 Score=172.28 Aligned_cols=223 Identities=13% Similarity=0.182 Sum_probs=151.8
Q ss_pred HHHhcCCCEEEEEeCC-CCEEEEEeHHHHHHHHHHhhCCCCCcc----cccccc-------ccccccccCCe--eEEcCC
Q psy744 166 NLIDYKIHRLPVIDEM-GNVLYILTHKRILRFLFLYINDLPKPS----FLNKTL-------RDLKIGTYENV--ETVAEE 231 (405)
Q Consensus 166 ~l~~~~i~~lpVvd~~-~~vvgilt~~dIl~~l~~~~~~~~~~~----~~~~~v-------~~i~~~~~~~~--~~v~~~ 231 (405)
.|.+++++++||++.+ ++++|++|.+|+++++........... ....++ +++|. +++ +++.++
T Consensus 49 ~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~im~---~~~~~~~v~~~ 125 (334)
T 2qrd_G 49 LLTLNNIVSAPLWDSEANKFAGLLTMADFVNVIKYYYQSSSFPEAIAEIDKFRLLGLREVERKIGA---IPPETIYVHPM 125 (334)
T ss_dssp HHHHHTCSCEEEEETTTTEEEEEECHHHHHHHHHHHHHHCSCGGGGGGGGSCBHHHHHHHHHHHTC---SCSSCCCBCTT
T ss_pred HHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHHHHHhhccCCccHHHHHhhhchhhHHHHHHhhcc---CCCceeeeCCC
Confidence 7889999999999965 899999999999987654321000000 001122 22342 445 899999
Q ss_pred CCHHHHHHHHHhcCCCEEEEECCCCc-----EEEEEeHHHHHHHHHhccc--cchhhhHHHhhhccccCccCceEecCCC
Q psy744 232 TSIIHALRKFLERRVSALPMTDSEGH-----LVDIFAKFDVINLAAEKTY--TNLDVTLKEANEHKTDWFEGVEKCLLDE 304 (405)
Q Consensus 232 ~~l~~a~~~m~~~~~~~lpVvd~~g~-----lvGivt~~Dl~~~~~~~~~--~~l~~~v~~~~~~~~~~~~~~~~v~~~~ 304 (405)
+++.++++.|.+++++++||+|++|. ++|++|.+|+++.+..... .....++.++ ...|.+++.++++++
T Consensus 126 ~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~v~~l---~~~m~~~~~~v~~~~ 202 (334)
T 2qrd_G 126 HSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSVLTQYRILKFISMNCKETAMLRVPLNQM---TIGTWSNLATASMET 202 (334)
T ss_dssp SBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEEEEEEHHHHHHHHHHHCGGGGGCCCBGGGS---SCSBCSSCCCBCTTS
T ss_pred CcHHHHHHHHHHCCceEEEEEeCCCCcCccceEEEeeHHHHHHHHHhhccchhhhhCcHHHh---CCcccCCceEECCCC
Confidence 99999999999999999999997654 9999999999988764321 0112233332 113668899999999
Q ss_pred CHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhCCCCCCCCccCCCCCCCCCCCCCCcCCcccccccCCc--
Q psy744 305 TLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVLKPSDDDIGVDETSSDSEVPVDPDLASSDDKVFEENEE-- 382 (405)
Q Consensus 305 ~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 382 (405)
++.++++.|.+++.+++||+|++|+++|+||..||++++...............+..... . . .....+..+..
T Consensus 203 ~~~~~~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~v~~~m~~~~~---~-~-~~~~~v~~~~~l~ 277 (334)
T 2qrd_G 203 KVYDVIKMLAEKNISAVPIVNSEGTLLNVYESVDVMHLIQDGDYSNLDLSVGEALLKRPA---N-F-DGVHTCRATDRLD 277 (334)
T ss_dssp BHHHHHHHHHHHTCSEEEEECTTCBEEEEEETHHHHHHHTTSCGGGGGSBHHHHHTTCCT---T-C-CCCCEECTTCBHH
T ss_pred cHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEHHHHHHHhhccccccccCcHHHHHhcccc---c-C-CCCEEECCCCcHH
Confidence 999999999999999999999889999999999999988642210000000000110000 0 0 11223333444
Q ss_pred -cccccccCccccccccc
Q psy744 383 -PRDYVQNSCWGEVPVSD 399 (405)
Q Consensus 383 -~~~~~~~~~~~~~~~~~ 399 (405)
..+.+.+.+.+.+||+|
T Consensus 278 ~~~~~m~~~~~~~l~Vvd 295 (334)
T 2qrd_G 278 GIFDAIKHSRVHRLFVVD 295 (334)
T ss_dssp HHHHHHHHSCCCEEEEEC
T ss_pred HHHHHHHHcCCCEEEEEC
Confidence 44455688999999998
No 15
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.80 E-value=2.9e-19 Score=152.44 Aligned_cols=136 Identities=58% Similarity=0.911 Sum_probs=114.5
Q ss_pred ccccccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhccccchhhhHHHhhh
Q psy744 209 FLNKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDVTLKEANE 288 (405)
Q Consensus 209 ~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~~ 288 (405)
...+.++++.+++.+++.++.+++++.+|++.|.+++++++||+|++|+++|+||..|+++......+...+.++.++|.
T Consensus 15 ~~~~~l~~~~v~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~~~~~~~~~~~~v~~~m~ 94 (152)
T 2uv4_A 15 FMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQ 94 (152)
T ss_dssp HHTSBHHHHTCSBCSSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHHHCSSCCCTTSBGGGGGG
T ss_pred HHHhhHHHccCCccCCceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHhcchhhhhhcchHHHHHh
Confidence 34455666666555788999999999999999999999999999988999999999999988765533334556677654
Q ss_pred ccccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHH
Q psy744 289 HKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLV 344 (405)
Q Consensus 289 ~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~ 344 (405)
.+..|.+++.++.+++++.++++.|.+++.+++||+|++|+++|+||..||++++.
T Consensus 95 ~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~l~ 150 (152)
T 2uv4_A 95 HRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQALV 150 (152)
T ss_dssp TCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHC
T ss_pred hhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 43334478899999999999999999999999999998899999999999999885
No 16
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.80 E-value=1.9e-19 Score=154.66 Aligned_cols=130 Identities=15% Similarity=0.144 Sum_probs=107.0
Q ss_pred ccccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhccccchhhhHHHhhhcc
Q psy744 211 NKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDVTLKEANEHK 290 (405)
Q Consensus 211 ~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~~~~ 290 (405)
...++++|+.. .+++++.+++++.+|++.|.+++++++||+|++|+++|+||.+|++++.......... ..-..+.
T Consensus 14 ~~~~~~iM~P~-~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~~~~~~~---~~~~~v~ 89 (156)
T 3k6e_A 14 LGQEETFLTPA-KNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEI---MADTDIV 89 (156)
T ss_dssp HTTGGGGEEET-TSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHH---HTTSBGG
T ss_pred hccHHHhCcch-hHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhccccccc---ccccCHH
Confidence 45788888643 6899999999999999999999999999999999999999999999887654322110 0111233
Q ss_pred ccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhC
Q psy744 291 TDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVLK 346 (405)
Q Consensus 291 ~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~~ 346 (405)
+.|.+++.++++++++.+|++.|.++++ +||||++|+++|+||.+||++++...
T Consensus 90 ~im~~~~~~v~~~~~l~~~~~~m~~~~~--lpVVd~~g~l~GiiT~~Dil~~~~~~ 143 (156)
T 3k6e_A 90 HMTKTDVAVVSPDFTITEVLHKLVDESF--LPVVDAEGIFQGIITRKSILKAVNAL 143 (156)
T ss_dssp GTCBCSCCCBCTTCCHHHHHHHTTTSSE--EEEECTTSBEEEEEEHHHHHHHHHHH
T ss_pred HhhcCCceecccccHHHHHHHHHHHcCC--eEEEecCCEEEEEEEHHHHHHHHHHH
Confidence 4577899999999999999999988764 99999999999999999999999653
No 17
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.80 E-value=6.3e-19 Score=149.61 Aligned_cols=126 Identities=21% Similarity=0.288 Sum_probs=109.3
Q ss_pred ccccccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCC-CcEEEEEeHHHHHHHHHhccccchhhhHHHhh
Q psy744 209 FLNKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSE-GHLVDIFAKFDVINLAAEKTYTNLDVTLKEAN 287 (405)
Q Consensus 209 ~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~ 287 (405)
+...+++++|... .+++++.+++++.+|++.|.+++++++||+|++ |+++|+||.+|+++...... ..++.+
T Consensus 20 l~~~~v~diM~~~-~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~----~~~v~~-- 92 (148)
T 3lv9_A 20 FEEKKIREIMVPR-TDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINEN----KIELEE-- 92 (148)
T ss_dssp GGTCBGGGTSEET-TTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS----CCCGGG--
T ss_pred cCCCCHHHccccH-HHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcCC----CccHHH--
Confidence 3456899999411 289999999999999999999999999999987 89999999999998876542 233333
Q ss_pred hccccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhC
Q psy744 288 EHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVLK 346 (405)
Q Consensus 288 ~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~~ 346 (405)
.| +++.++++++++.++++.|.+++.+++||+|++|+++|+||..||++++..+
T Consensus 93 ----~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~~ 146 (148)
T 3lv9_A 93 ----IL-RDIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIVGE 146 (148)
T ss_dssp ----TC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHHHHHT
T ss_pred ----hc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCc
Confidence 36 7889999999999999999999999999999889999999999999999854
No 18
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.80 E-value=4.8e-19 Score=146.99 Aligned_cols=124 Identities=18% Similarity=0.243 Sum_probs=107.2
Q ss_pred ccccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCC-CcEEEEEeHHHHHHHHHhccccchhhhHHHhhhc
Q psy744 211 NKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSE-GHLVDIFAKFDVINLAAEKTYTNLDVTLKEANEH 289 (405)
Q Consensus 211 ~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~~~ 289 (405)
..+++++|... .+++++.+++++.+|++.|.+++++++||+|++ |+++|+||.+|+++....+. ...++.++
T Consensus 5 ~~~v~~iM~~~-~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~---~~~~v~~~--- 77 (130)
T 3i8n_A 5 DVPVTQVMTPR-PVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGS---GQKQLGAV--- 77 (130)
T ss_dssp --CCTTTSCCB-CCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTT---TTSBHHHH---
T ss_pred cCCHhhCCCcH-HHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCC---CcCCHHHH---
Confidence 55888998422 457799999999999999999999999999987 89999999999999876542 24566666
Q ss_pred cccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHh
Q psy744 290 KTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVL 345 (405)
Q Consensus 290 ~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~ 345 (405)
| +++.++++++++.++++.|.+++.+.+||+|++|+++|+||..||++++.+
T Consensus 78 ---m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~~dil~~l~g 129 (130)
T 3i8n_A 78 ---M-RPIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTLEDIFEHLVG 129 (130)
T ss_dssp ---S-EECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHHHT
T ss_pred ---h-cCCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEHHHHHHHHcC
Confidence 4 457899999999999999999999999999989999999999999999874
No 19
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.79 E-value=1.1e-18 Score=144.98 Aligned_cols=124 Identities=15% Similarity=0.157 Sum_probs=106.4
Q ss_pred ccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECC-CCcEEEEEeHHHHHHHHHhccccchhhhHHHhhhccc
Q psy744 213 TLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDS-EGHLVDIFAKFDVINLAAEKTYTNLDVTLKEANEHKT 291 (405)
Q Consensus 213 ~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~~~~~ 291 (405)
+++++|... ++++++.+++++.+|++.|.+++++++||+++ +|+++|++|.+|++++...+.. ....++.++
T Consensus 3 ~v~~iM~~~-~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~~-~~~~~v~~~----- 75 (130)
T 3hf7_A 3 SVNDIMVPR-NEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKE-FTKEIMLRA----- 75 (130)
T ss_dssp BHHHHSEEG-GGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSSC-CCHHHHHHH-----
T ss_pred CHHHhCccH-HHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccCc-cchhhHHHh-----
Confidence 577788421 47899999999999999999999999999975 5899999999999998765421 113456665
Q ss_pred cCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHh
Q psy744 292 DWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVL 345 (405)
Q Consensus 292 ~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~ 345 (405)
| +++.++++++++.++++.|.+++.+.+||+|++|+++|+||..||++++.+
T Consensus 76 -m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~g 127 (130)
T 3hf7_A 76 -A-DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIVG 127 (130)
T ss_dssp -S-BCCCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHHHC
T ss_pred -c-cCCeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHHhC
Confidence 4 578899999999999999999999999999989999999999999999984
No 20
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.78 E-value=2.2e-18 Score=150.32 Aligned_cols=125 Identities=14% Similarity=0.202 Sum_probs=108.3
Q ss_pred ccccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCC-CcEEEEEeHHHHHHHHHhccccchhhhHHHhhhc
Q psy744 211 NKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSE-GHLVDIFAKFDVINLAAEKTYTNLDVTLKEANEH 289 (405)
Q Consensus 211 ~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~~~ 289 (405)
..+++++|... .+++++.+++++.+|++.|.+++++++||+|++ |+++|+||.+|++++...+. ..++.+
T Consensus 41 ~~~v~diM~~~-~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~----~~~v~~---- 111 (172)
T 3lhh_A 41 ERTISSLMVPR-SDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESIAGE----RLELVD---- 111 (172)
T ss_dssp --CTTTTSEEG-GGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHHTTC----CCCGGG----
T ss_pred CCCHHHhCccH-HHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHhhcC----cccHHH----
Confidence 55889998421 578999999999999999999999999999987 99999999999999876542 233444
Q ss_pred cccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhCC
Q psy744 290 KTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVLKP 347 (405)
Q Consensus 290 ~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~~~ 347 (405)
.| +++.++.+++++.++++.|.+++++.+||+|++|+++|+||..||++++..+.
T Consensus 112 --im-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dil~~l~~~~ 166 (172)
T 3lhh_A 112 --LV-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLVTLQDMMDALTGEF 166 (172)
T ss_dssp --GC-BCCEEEETTCCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHTTC
T ss_pred --Hh-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCEEEEeeHHHHHHHHhCCC
Confidence 36 78899999999999999999999999999998899999999999999998644
No 21
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.78 E-value=7e-19 Score=145.39 Aligned_cols=123 Identities=17% Similarity=0.281 Sum_probs=104.6
Q ss_pred cccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCC-CcEEEEEeHHHHHHHHHhccccchhhhHHHhhhcc
Q psy744 212 KTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSE-GHLVDIFAKFDVINLAAEKTYTNLDVTLKEANEHK 290 (405)
Q Consensus 212 ~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~~~~ 290 (405)
.+++++|... .+++++.+++++.+|++.|.+++++++||+|++ |+++|+||.+|+++.+.... ...++.++
T Consensus 3 ~~v~diM~~~-~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~---~~~~v~~~---- 74 (127)
T 3nqr_A 3 QRVRDIMIPR-SQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDA---EAFSMDKV---- 74 (127)
T ss_dssp CBHHHHSEEG-GGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTTC---CCCCHHHH----
T ss_pred cCHHHhcccH-HHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhccC---CCCCHHHH----
Confidence 4678888421 458899999999999999999999999999987 89999999999988765431 24566776
Q ss_pred ccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHh
Q psy744 291 TDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVL 345 (405)
Q Consensus 291 ~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~ 345 (405)
| .++.++++++++.++++.|.+++.+++||+|++|+++|+||..||++++..
T Consensus 75 --m-~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l~g 126 (127)
T 3nqr_A 75 --L-RTAVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIVG 126 (127)
T ss_dssp --C-BCCCEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC--
T ss_pred --c-CCCeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhC
Confidence 3 346799999999999999999999999999999999999999999999863
No 22
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.78 E-value=3.1e-19 Score=155.37 Aligned_cols=160 Identities=18% Similarity=0.252 Sum_probs=121.2
Q ss_pred ccchhHHHHHHhhhcccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCC
Q psy744 71 KDGGNQIFVKFFKFHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTS 150 (405)
Q Consensus 71 ~~~~~~~~~~~l~~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~ 150 (405)
+++..+++.+.++..++.|+| +++++++++++++.+|++.|.+++++++||+|++ ++++|++|..|+++.+....
T Consensus 4 e~~~~~~~~~~l~~~~V~diM--~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~-g~lvGiit~~Dll~~~~~~~-- 78 (170)
T 4esy_A 4 EQARRRAIARAIRQVPIRDIL--TSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQN-GHLVGIITESDFLRGSIPFW-- 78 (170)
T ss_dssp HHHHHHHHHHHHHTSBGGGGC--CSCCCCEETTSBHHHHHHHHHHTTCSEEEEECTT-SCEEEEEEGGGGGGGTCCTT--
T ss_pred HHHHHHHHHHHHcCCCHHHhc--CCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCC-ccEEEEEEHHHHHHHHhhcc--
Confidence 455678888999999999999 7789999999999999999999999999999987 99999999999985432110
Q ss_pred CCCCHHHHhhccHHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcC
Q psy744 151 SSITMEELEEHKLETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAE 230 (405)
Q Consensus 151 ~~~~~~~l~~~~i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~ 230 (405)
...... +..... ..... ..+... ....+++++| .++++++.+
T Consensus 79 ----~~~~~~------~~~~~~----------------~~~~~-~~~~~~--------~~~~~v~~im---~~~~~tv~~ 120 (170)
T 4esy_A 79 ----IYEASE------ILSRAI----------------PAPEV-EHLFET--------GRKLTASAVM---TQPVVTAAP 120 (170)
T ss_dssp ----HHHHHH------HHTTTS----------------CHHHH-HHHHHH--------HTTCBHHHHC---BCCSCCBCT
T ss_pred ----ccchhh------hhhhcc----------------chhhH-Hhhhcc--------ccccchhhhc---ccCcccCCc
Confidence 000000 000000 00000 111111 1244788888 488999999
Q ss_pred CCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhc
Q psy744 231 ETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEK 274 (405)
Q Consensus 231 ~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~ 274 (405)
++++.+|+++|.+++++++||+| +|+++|+||..||++++...
T Consensus 121 ~~~l~~a~~~m~~~~~~~lpVvd-~g~lvGivt~~Dil~~l~~~ 163 (170)
T 4esy_A 121 EDSVGSIADQMRRHGIHRIPVVQ-DGVPVGIVTRRDLLKLLLLE 163 (170)
T ss_dssp TSBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHTTTSCCC
T ss_pred chhHHHHHHHHHHcCCcEEEEEE-CCEEEEEEEHHHHHHHHHhc
Confidence 99999999999999999999998 69999999999999876543
No 23
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.78 E-value=1e-18 Score=144.91 Aligned_cols=123 Identities=15% Similarity=0.274 Sum_probs=104.6
Q ss_pred ccccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCC-CcEEEEEeHHHHHHHHHhccccchhhhHHHhhhc
Q psy744 211 NKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSE-GHLVDIFAKFDVINLAAEKTYTNLDVTLKEANEH 289 (405)
Q Consensus 211 ~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~~~ 289 (405)
..+++++|... .+++++.+++++.+|++.|.+++++++||+|++ |+++|+||.+|++++.... ..++.++
T Consensus 4 ~~~v~diM~~~-~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~-----~~~v~~~--- 74 (129)
T 3jtf_A 4 ERTVADIMVPR-SRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLEP-----ALDIRSL--- 74 (129)
T ss_dssp CCBHHHHCEEG-GGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTCT-----TSCGGGG---
T ss_pred CCCHHHhCccH-HHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhccC-----CcCHHHH---
Confidence 45788888421 577899999999999999999999999999985 8999999999998765422 2334444
Q ss_pred cccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhC
Q psy744 290 KTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVLK 346 (405)
Q Consensus 290 ~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~~ 346 (405)
| +++.++.+++++.++++.|.+++.+.+||+|++|+++|+||.+||++++.++
T Consensus 75 ---m-~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l~ge 127 (129)
T 3jtf_A 75 ---V-RPAVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQIVGD 127 (129)
T ss_dssp ---C-BCCCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHHHHT
T ss_pred ---h-CCCeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCC
Confidence 4 4578999999999999999999999999999889999999999999999854
No 24
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.78 E-value=1.6e-18 Score=141.85 Aligned_cols=119 Identities=23% Similarity=0.341 Sum_probs=105.1
Q ss_pred ccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhccccchhhhHHHhhhcccc
Q psy744 213 TLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDVTLKEANEHKTD 292 (405)
Q Consensus 213 ~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~~~~~~ 292 (405)
+++++|. +++.++.+++++.++++.|.+++++++||+|++|+++|+|+..|+++.+.... .++.++
T Consensus 2 ~v~~im~---~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~-----~~v~~~------ 67 (122)
T 3kpb_A 2 LVKDILS---KPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQNK-----KTIEEI------ 67 (122)
T ss_dssp BHHHHCC---SCCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHHTTC-----CBGGGT------
T ss_pred chHHhhC---CCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHHhcc-----cCHHHH------
Confidence 5677773 78899999999999999999999999999999999999999999998876542 134443
Q ss_pred CccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHh
Q psy744 293 WFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVL 345 (405)
Q Consensus 293 ~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~ 345 (405)
|.+++.++.+++++.++++.|.+++.+++||+|++|+++|+||..||++++..
T Consensus 68 ~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l~~ 120 (122)
T 3kpb_A 68 MTRNVITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLFGG 120 (122)
T ss_dssp SBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHC-
T ss_pred hcCCCeEECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHHhhc
Confidence 66788999999999999999999999999999988999999999999999863
No 25
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.77 E-value=1.2e-18 Score=145.96 Aligned_cols=125 Identities=14% Similarity=0.212 Sum_probs=104.3
Q ss_pred cccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCC-CcEEEEEeHHHHHHHHHhccccchhhhHHHhhhcc
Q psy744 212 KTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSE-GHLVDIFAKFDVINLAAEKTYTNLDVTLKEANEHK 290 (405)
Q Consensus 212 ~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~~~~ 290 (405)
.+++++|... ++++++.+++++.+|++.|.+++++++||+|++ |+++|+||.+|+++++.... ....++.++
T Consensus 3 ~~v~~iM~~~-~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~--~~~~~v~~~---- 75 (136)
T 3lfr_A 3 LQVRDIMVPR-SQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKAD--GDSDDVKKL---- 75 (136)
T ss_dssp CBHHHHSEEG-GGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSSS--GGGCCGGGT----
T ss_pred CChHhccccH-HHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhcc--CCCcCHHHH----
Confidence 4678888421 578999999999999999999999999999987 89999999999998765321 123344444
Q ss_pred ccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhC
Q psy744 291 TDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVLK 346 (405)
Q Consensus 291 ~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~~ 346 (405)
| .++.++.+++++.+|++.|.+++++.+||+|++|+++|+||.+||++++..+
T Consensus 76 --m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~~~ 128 (136)
T 3lfr_A 76 --L-RPATFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQIVGD 128 (136)
T ss_dssp --C-BCCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC---
T ss_pred --c-CCCeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCC
Confidence 4 3488999999999999999999999999999899999999999999998753
No 26
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.76 E-value=2.5e-18 Score=146.86 Aligned_cols=125 Identities=19% Similarity=0.285 Sum_probs=107.1
Q ss_pred ccccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEE-CC-CCcEEEEEeHHHHHHHHHhccccchhhhHHHhhh
Q psy744 211 NKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMT-DS-EGHLVDIFAKFDVINLAAEKTYTNLDVTLKEANE 288 (405)
Q Consensus 211 ~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVv-d~-~g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~~ 288 (405)
..+++++|... .+++++.+++++.+|++.|.+++++++||+ |+ +|+++|+||.+|+++.+.... ..++.+
T Consensus 19 ~~~v~~iM~~~-~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~~----~~~v~~--- 90 (153)
T 3oco_A 19 DKVASDVMVDR-TSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARIDD----KAKIST--- 90 (153)
T ss_dssp HCBHHHHSEEG-GGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHHT----TSBGGG---
T ss_pred CCEeeeEecch-hheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcCC----CCcHHH---
Confidence 45889999411 378999999999999999999999999999 65 489999999999998876542 233343
Q ss_pred ccccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhCC
Q psy744 289 HKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVLKP 347 (405)
Q Consensus 289 ~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~~~ 347 (405)
.| +++.++.+++++.+|++.|.+++++.+||+|++|+++|+||..||++++..+.
T Consensus 91 ---~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~~~~ 145 (153)
T 3oco_A 91 ---IM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELFGNL 145 (153)
T ss_dssp ---TC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHHC--
T ss_pred ---Hh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHhccC
Confidence 36 78999999999999999999999999999998899999999999999998643
No 27
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.76 E-value=5.4e-18 Score=146.62 Aligned_cols=134 Identities=20% Similarity=0.282 Sum_probs=112.3
Q ss_pred ccccccccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhccccchhhhHHHh
Q psy744 207 PSFLNKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDVTLKEA 286 (405)
Q Consensus 207 ~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~ 286 (405)
..+...+++++|....++++++.+++++.+|++.|.+++++++||+|++|+++|+||..|+++.+..........++.++
T Consensus 19 ~~l~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~ 98 (165)
T 3fhm_A 19 FQGMATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQGAASLQQSVSVA 98 (165)
T ss_dssp CSSSSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHGGGGGTSBGGGT
T ss_pred HhhhhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHhcCCccccCCHHHH
Confidence 34456688998841113689999999999999999999999999999999999999999999887765322234445554
Q ss_pred hhccccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhCC
Q psy744 287 NEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVLKP 347 (405)
Q Consensus 287 ~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~~~ 347 (405)
|.+++.++.+++++.++++.|.+++++++||+|+ |+++|+||..||++++....
T Consensus 99 ------m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~~~Giit~~dil~~~~~~~ 152 (165)
T 3fhm_A 99 ------MTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-GRLAGIISIGDVVKARIGEI 152 (165)
T ss_dssp ------SBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHTTCC-
T ss_pred ------hcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHHHH
Confidence 6678899999999999999999999999999997 99999999999999997543
No 28
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.76 E-value=8.5e-18 Score=141.29 Aligned_cols=122 Identities=18% Similarity=0.255 Sum_probs=105.7
Q ss_pred ccccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCC--cEEEEEeHHHHHHHHHhccccchhhhHHHhhh
Q psy744 211 NKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEG--HLVDIFAKFDVINLAAEKTYTNLDVTLKEANE 288 (405)
Q Consensus 211 ~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g--~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~~ 288 (405)
..+++++|. +++.++.+++++.+|++.|.+++++++||+|++| +++|+||.+|+++.+..+. ..+.++.++
T Consensus 4 ~~~v~~im~---~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~~~--~~~~~v~~~-- 76 (141)
T 2rih_A 4 AIRTSELLK---RPPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQRL--DLDGPAMPI-- 76 (141)
T ss_dssp -CBGGGGCC---SCCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHHTTC--CTTSBSGGG--
T ss_pred ceEHHHHhc---CCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHhcCC--CCCCCHHHH--
Confidence 457888884 7899999999999999999999999999999888 9999999999998876542 123344444
Q ss_pred ccccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHH
Q psy744 289 HKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLV 344 (405)
Q Consensus 289 ~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~ 344 (405)
|.+++.+++++ ++.++++.|.+++.+++||+|++|+++|+||..||++++.
T Consensus 77 ----m~~~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~ 127 (141)
T 2rih_A 77 ----ANSPITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDLCFERA 127 (141)
T ss_dssp ----CBCCCEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHSCHH
T ss_pred ----cCCCCeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHHHHHHH
Confidence 66789999999 9999999999999999999998899999999999987665
No 29
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.75 E-value=9.8e-18 Score=144.09 Aligned_cols=124 Identities=15% Similarity=0.314 Sum_probs=106.8
Q ss_pred ccccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhccccchhhhHHHhhhcc
Q psy744 211 NKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDVTLKEANEHK 290 (405)
Q Consensus 211 ~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~~~~ 290 (405)
..+++++|. + ++++.+++++.+|++.|.+++++++||+|++|+++|+||.+|+++...... .....++.++
T Consensus 16 ~~~v~~im~---~-~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~-~~~~~~v~~~---- 86 (159)
T 3fv6_A 16 KLQVKDFQS---I-PVVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIGQQ-ELTSVPVHII---- 86 (159)
T ss_dssp TCBGGGSCB---C-CCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHTSCS-CTTTCBGGGT----
T ss_pred hCCHHHHcC---C-CEEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHhhccC-cccCcCHHHH----
Confidence 458889883 4 569999999999999999999999999998999999999999998774431 1223455554
Q ss_pred ccCcc--CceEecCCCCHHHHHHHHHHcCCCEEEEEcCCC---cEEEEEeHHHHHHHHHh
Q psy744 291 TDWFE--GVEKCLLDETLFTVMERIVRAEVHRLVVVDEDD---HVLGVLSLSDILVYLVL 345 (405)
Q Consensus 291 ~~~~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g---~lvGiIt~~DIl~~l~~ 345 (405)
|.+ ++.++++++++.+|++.|.+++++++||+|++| +++|+||..||++++..
T Consensus 87 --m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~~ 144 (159)
T 3fv6_A 87 --MTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILVS 144 (159)
T ss_dssp --SEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHHH
T ss_pred --HcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHHH
Confidence 556 788999999999999999999999999999888 99999999999999985
No 30
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.75 E-value=1.2e-17 Score=138.65 Aligned_cols=125 Identities=14% Similarity=0.234 Sum_probs=108.3
Q ss_pred ccccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhccccchhhhHHHhhhcc
Q psy744 211 NKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDVTLKEANEHK 290 (405)
Q Consensus 211 ~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~~~~ 290 (405)
..+++++|. +++.++.+++++.+|++.|.+++++++||+| +|+++|+++..|+++....+. ....++.++
T Consensus 3 ~~~v~~im~---~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~--~~~~~v~~~---- 72 (133)
T 2ef7_A 3 EEIVKEYMK---TQVISVTKDAKLNDIAKVMTEKNIGSVIVVD-GNKPVGIITERDIVKAIGKGK--SLETKAEEF---- 72 (133)
T ss_dssp CCBGGGTSB---CSCCEEETTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTTC--CTTCBGGGT----
T ss_pred cccHHHhcc---CCCEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEcHHHHHHHHhcCC--CcccCHHHH----
Confidence 347888883 6789999999999999999999999999999 899999999999998776542 123344444
Q ss_pred ccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhCC
Q psy744 291 TDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVLKP 347 (405)
Q Consensus 291 ~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~~~ 347 (405)
|.+++.++++++++.++++.|.+++.+++||+|++|+++|+||..||++++....
T Consensus 73 --~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~~~ 127 (133)
T 2ef7_A 73 --MTASLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAIDDMF 127 (133)
T ss_dssp --SEECCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHC
T ss_pred --cCCCCEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHHH
Confidence 5578899999999999999999999999999998899999999999999987543
No 31
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.75 E-value=1.3e-17 Score=139.27 Aligned_cols=124 Identities=24% Similarity=0.444 Sum_probs=107.9
Q ss_pred ccccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHH-HHHHHhccccchhhhHHHhhhc
Q psy744 211 NKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDV-INLAAEKTYTNLDVTLKEANEH 289 (405)
Q Consensus 211 ~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl-~~~~~~~~~~~l~~~v~~~~~~ 289 (405)
..+++++| .+++.++.+++++.++++.|.+++.+++||+|++|+++|+++..|+ ++.+..+. ....++.++
T Consensus 7 ~~~v~~im---~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~--~~~~~v~~~--- 78 (138)
T 2p9m_A 7 NIKVKDVM---TKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIRDKY--TLETTIGDV--- 78 (138)
T ss_dssp TCBGGGTS---BCSCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTTTCC--CSSCBHHHH---
T ss_pred cCCHHHhh---cCCceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHhhcc--cCCcCHHHH---
Confidence 55788888 3688999999999999999999999999999988999999999999 87665432 224566666
Q ss_pred cccCccCceEecCCCCHHHHHHHHHHcC-----CCEEEEEcCCCcEEEEEeHHHHHHHHHh
Q psy744 290 KTDWFEGVEKCLLDETLFTVMERIVRAE-----VHRLVVVDEDDHVLGVLSLSDILVYLVL 345 (405)
Q Consensus 290 ~~~~~~~~~~v~~~~~l~~a~~~m~~~~-----~~~lpVvd~~g~lvGiIt~~DIl~~l~~ 345 (405)
|.+++.++++++++.++++.|.+++ .+++||+|++|+++|+||..||++++..
T Consensus 79 ---m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~ 136 (138)
T 2p9m_A 79 ---MTKDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRTISK 136 (138)
T ss_dssp ---SCSSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred ---hCCCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHHHHHHHHh
Confidence 5578899999999999999999999 9999999988999999999999998864
No 32
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.75 E-value=1.8e-17 Score=138.63 Aligned_cols=125 Identities=18% Similarity=0.336 Sum_probs=106.9
Q ss_pred ccccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHH-HHhccccchhhhHHHhhhc
Q psy744 211 NKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINL-AAEKTYTNLDVTLKEANEH 289 (405)
Q Consensus 211 ~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~-~~~~~~~~l~~~v~~~~~~ 289 (405)
..+++++|. +++.++.+++++.+|++.|.+++++++||+|++|+++|+|+..|+++. ...+. ....++.++
T Consensus 6 ~~~v~~im~---~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~--~~~~~v~~~--- 77 (138)
T 2yzi_A 6 KAPIKVYMT---KKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIVPGL--PYDIPVERI--- 77 (138)
T ss_dssp TSBGGGTCB---CCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCC--CTTSBGGGT---
T ss_pred hhhHHHHhc---CCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhcCC--cccCCHHHH---
Confidence 457888884 789999999999999999999999999999988999999999999743 33321 123344444
Q ss_pred cccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhCC
Q psy744 290 KTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVLKP 347 (405)
Q Consensus 290 ~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~~~ 347 (405)
|.+++.++++++++.++++.|.+++++++ |+|++|+++|+||..||++++....
T Consensus 78 ---m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~dil~~~~~~~ 131 (138)
T 2yzi_A 78 ---MTRNLITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLSDLLEASRRRL 131 (138)
T ss_dssp ---CBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHHHHHHHHHCCS
T ss_pred ---hhCCCeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHHHHHHHHHHHH
Confidence 66789999999999999999999999999 9998899999999999999998543
No 33
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.75 E-value=1.6e-17 Score=136.34 Aligned_cols=121 Identities=26% Similarity=0.363 Sum_probs=105.1
Q ss_pred ccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhccccchhhhHHHhhhcccc
Q psy744 213 TLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDVTLKEANEHKTD 292 (405)
Q Consensus 213 ~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~~~~~~ 292 (405)
+++++| .+++.++.+++++.+|++.|.+++.+++||+| +|+++|+++..|+++....+. .....++.++
T Consensus 2 ~v~~~m---~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~G~it~~dl~~~~~~~~-~~~~~~v~~~------ 70 (125)
T 1pbj_A 2 RVEDVM---VTDVDTIDITASLEDVLRNYVENAKGSSVVVK-EGVRVGIVTTWDVLEAIAEGD-DLAEVKVWEV------ 70 (125)
T ss_dssp CHHHHC---BCSCCEEETTCBHHHHHHHHHHHCCCEEEEEE-TTEEEEEEEHHHHHHHHHHTC-CTTTSBHHHH------
T ss_pred CHHHhc---CCCceEECCCCcHHHHHHHHHHcCCCEEEEEe-CCeeEEEEeHHHHHHHHhcCC-cccccCHHHH------
Confidence 456777 36889999999999999999999999999999 899999999999998776542 1234567776
Q ss_pred CccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHh
Q psy744 293 WFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVL 345 (405)
Q Consensus 293 ~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~ 345 (405)
|.+++.++.+++++.++++.|.+++.+++||+|+ |+++|+||..||++++..
T Consensus 71 m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~Gvit~~dl~~~l~~ 122 (125)
T 1pbj_A 71 MERDLVTISPRATIKEAAEKMVKNVVWRLLVEED-DEIIGVISATDILRAKMA 122 (125)
T ss_dssp CBCGGGEECTTSCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHHC-
T ss_pred cCCCCeEECCCCCHHHHHHHHHhcCCcEEEEEEC-CEEEEEEEHHHHHHHHHh
Confidence 5578899999999999999999999999999997 999999999999999863
No 34
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.75 E-value=1.5e-17 Score=145.31 Aligned_cols=124 Identities=13% Similarity=0.140 Sum_probs=107.1
Q ss_pred ccccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCC-CcEEEEEeHHHHHHHHHhccccchhhhHHHhhhc
Q psy744 211 NKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSE-GHLVDIFAKFDVINLAAEKTYTNLDVTLKEANEH 289 (405)
Q Consensus 211 ~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~~~ 289 (405)
..+++++|... ++++++.+++++.+|++.|.+++++++||+|++ |+++|+|+.+|++++..... ..++.
T Consensus 35 ~~~v~diM~~~-~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~~~~----~~~v~----- 104 (173)
T 3ocm_A 35 ERSIRSIMTPR-TDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITEG----RVRRN----- 104 (173)
T ss_dssp TSCSTTTSEEG-GGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS----SCCGG-----
T ss_pred CCCHHHhCCcH-HHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHhcCC----cchhH-----
Confidence 45889999421 568999999999999999999999999999976 89999999999998876442 12222
Q ss_pred cccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhCC
Q psy744 290 KTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVLKP 347 (405)
Q Consensus 290 ~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~~~ 347 (405)
|.+++.++.+++++.+|++.|.+++.+.+||+|++|+++|+||..||++++..+.
T Consensus 105 ---~~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lvGiIT~~Dil~~l~~~i 159 (173)
T 3ocm_A 105 ---RLRDPIIVHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGEF 159 (173)
T ss_dssp ---GSBCCCEECGGGCHHHHHHHHHHSTTCCEEEECTTCCEEEEECHHHHHHHHHCCC
T ss_pred ---hcCCCeEECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEEEEEeHHHHHHHHhCcC
Confidence 3367889999999999999999999999999998999999999999999998644
No 35
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.75 E-value=2.7e-18 Score=142.00 Aligned_cols=123 Identities=20% Similarity=0.209 Sum_probs=106.4
Q ss_pred ccccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhccccchhhhHHHhhhcc
Q psy744 211 NKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDVTLKEANEHK 290 (405)
Q Consensus 211 ~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~~~~ 290 (405)
..+++++|. +++.++.+++++.+|++.|.+++++++||+|+ |+++|+||.+|+++...++.. ...++.+
T Consensus 4 s~~v~~~m~---~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~Givt~~dl~~~~~~~~~--~~~~v~~----- 72 (128)
T 3gby_A 4 SVTFSYLAE---TDYPVFTLGGSTADAARRLAASGCACAPVLDG-ERYLGMVHLSRLLEGRKGWPT--VKEKLGE----- 72 (128)
T ss_dssp TCBGGGGCB---CCSCCEETTSBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHTTCSSSCC--TTCBCCG-----
T ss_pred ceEHHHhhc---CCcceECCCCCHHHHHHHHHHCCCcEEEEEEC-CEEEEEEEHHHHHHHHhhCCc--ccCcHHH-----
Confidence 447888884 78999999999999999999999999999998 999999999999987654321 1123333
Q ss_pred ccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHh
Q psy744 291 TDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVL 345 (405)
Q Consensus 291 ~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~ 345 (405)
.|.+++.++.+++++.++++.|.+++.+++||+|++|+++|+||..||++++..
T Consensus 73 -~m~~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~l~~ 126 (128)
T 3gby_A 73 -ELLETVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLAE 126 (128)
T ss_dssp -GGCBCCCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHHHHHT
T ss_pred -HccCCCcEECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHHHHHh
Confidence 366788999999999999999999999999999989999999999999999863
No 36
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.75 E-value=1.3e-17 Score=138.92 Aligned_cols=126 Identities=24% Similarity=0.290 Sum_probs=104.7
Q ss_pred ccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhccccchhhhHHHhhhcccc
Q psy744 213 TLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDVTLKEANEHKTD 292 (405)
Q Consensus 213 ~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~~~~~~ 292 (405)
+++++|....+++.++.+++++.+|++.|.+++++++||+| +|+++|+|+..|+++............++.++
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~------ 79 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMK-DEKLVGILTERDFSRKSYLLDKPVKDTQVKEI------ 79 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHGGGSSSCGGGSBGGGT------
T ss_pred eHHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEehHHHHHHHHHcCCCcccCCHHHh------
Confidence 67777721116889999999999999999999999999999 89999999999998754433222223444444
Q ss_pred CccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhC
Q psy744 293 WFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVLK 346 (405)
Q Consensus 293 ~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~~ 346 (405)
|.+++.++++++++.++++.|.+++.+++||+| +|+++|+||..||++++..+
T Consensus 80 m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dll~~~~~~ 132 (135)
T 2rc3_A 80 MTRQVAYVDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGLLSIGDLVKDAISQ 132 (135)
T ss_dssp SBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHC-
T ss_pred ccCCCeEECCCCcHHHHHHHHHHhCCCEEEEEe-CCEEEEEEEHHHHHHHHHhc
Confidence 667889999999999999999999999999999 79999999999999998743
No 37
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.74 E-value=1.4e-17 Score=146.81 Aligned_cols=127 Identities=20% Similarity=0.284 Sum_probs=108.8
Q ss_pred cccccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhccccchhhhHHHhhhc
Q psy744 210 LNKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDVTLKEANEH 289 (405)
Q Consensus 210 ~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~~~ 289 (405)
+..+++++|. ++++++.+++++.+|++.|.+++++++||+|++|+++|+++.+|+++.+..........++.++
T Consensus 7 ~~~~v~~im~---~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~~~~~~~~~~~v~~i--- 80 (184)
T 1pvm_A 7 MFMRVEKIMN---SNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIPRNKKPDEVPIRLV--- 80 (184)
T ss_dssp CCCBGGGTSB---TTCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTGGGCCCGGGSBGGGT---
T ss_pred cccCHHHhcC---CCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhcccCcccCCHHHH---
Confidence 4568899984 7899999999999999999999999999999889999999999999876542111223344444
Q ss_pred cccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHh
Q psy744 290 KTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVL 345 (405)
Q Consensus 290 ~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~ 345 (405)
|.+++.++.+++++.+|++.|.+++.+++||+|++|+++|+||..||++++..
T Consensus 81 ---m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~ 133 (184)
T 1pvm_A 81 ---MRKPIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYLSR 133 (184)
T ss_dssp ---SBSSCCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTTSCH
T ss_pred ---hCCCCcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHh
Confidence 66788999999999999999999999999999988999999999999987754
No 38
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.74 E-value=3.3e-17 Score=140.27 Aligned_cols=129 Identities=15% Similarity=0.226 Sum_probs=111.2
Q ss_pred ccccccccccc---CCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhccccchhhhHHHhhh
Q psy744 212 KTLRDLKIGTY---ENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDVTLKEANE 288 (405)
Q Consensus 212 ~~v~~i~~~~~---~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~~ 288 (405)
.+++++|.... +++.++.+++++.+|++.|.+++++++||++ +|+++|+|+..|+++.+..........++.++
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~-- 83 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVD-GDDIAGIVTERDYARKVVLQERSSKATRVEEI-- 83 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEES-SSSEEEEEEHHHHHHHSGGGTCCSSSCBHHHH--
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEee-CCEEEEEEEHHHHHHHHHhccCCccccCHHHH--
Confidence 46888885332 5679999999999999999999999999966 79999999999999887665433345677776
Q ss_pred ccccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhCCC
Q psy744 289 HKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVLKPS 348 (405)
Q Consensus 289 ~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~~~~ 348 (405)
|.+++.++.+++++.++++.|.+++++++||+| +|+++|+||..||++++.....
T Consensus 84 ----m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dil~~l~~~~~ 138 (157)
T 4fry_A 84 ----MTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIADQQ 138 (157)
T ss_dssp ----SBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTTCC
T ss_pred ----cCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHHHHH
Confidence 557889999999999999999999999999999 7999999999999999986553
No 39
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.74 E-value=1.3e-17 Score=141.50 Aligned_cols=129 Identities=19% Similarity=0.231 Sum_probs=107.7
Q ss_pred cccccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhcccc----chhhhHHH
Q psy744 210 LNKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYT----NLDVTLKE 285 (405)
Q Consensus 210 ~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~~----~l~~~v~~ 285 (405)
...+++++|... ++++++.+++++.+|++.|.+++++++||+|++|+++|+||..|+++.+...... ....++.+
T Consensus 13 ~~~~v~~im~~~-~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v~~ 91 (150)
T 3lqn_A 13 QQIFVKDLMISS-EKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGILGLERIEFERLEEMKVEQ 91 (150)
T ss_dssp HHCBHHHHSEEG-GGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHTBCSSSBCGGGGGGCBGGG
T ss_pred hcCChhhcccCC-CceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHHHHHHhhcccchhHHhcCCHHH
Confidence 356888988421 4689999999999999999999999999999999999999999999887532111 11233333
Q ss_pred hhhccccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhCC
Q psy744 286 ANEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVLKP 347 (405)
Q Consensus 286 ~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~~~ 347 (405)
.|.+++.++.+++++.++++.|.++++ +||+|++|+++|+||..||++++....
T Consensus 92 ------~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~dil~~l~~~~ 145 (150)
T 3lqn_A 92 ------VMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRRAILKLLNKKV 145 (150)
T ss_dssp ------TCBSSCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHHHHHHHHHHHC
T ss_pred ------HhcCCCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHHHHHHHHHHHh
Confidence 466889999999999999999999987 999998999999999999999998543
No 40
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.74 E-value=7.8e-18 Score=139.89 Aligned_cols=122 Identities=20% Similarity=0.272 Sum_probs=105.3
Q ss_pred cccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHH-HHHhccccchhhhHHHhhhcc
Q psy744 212 KTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVIN-LAAEKTYTNLDVTLKEANEHK 290 (405)
Q Consensus 212 ~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~-~~~~~~~~~l~~~v~~~~~~~ 290 (405)
.+++++|. +++.++.+++++.++++.|.+++++++||+|++|+++|+|+..|+++ .+..+. .....++.++|
T Consensus 8 ~~v~~im~---~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~-~~~~~~v~~~m--- 80 (133)
T 1y5h_A 8 TTARDIMN---AGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAGL-DPNTATAGELA--- 80 (133)
T ss_dssp CCHHHHSE---ETCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHHTTGGGTC-CTTTSBHHHHH---
T ss_pred cCHHHHhc---CCceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHHHHHhcCC-CccccCHHHHh---
Confidence 47788884 68899999999999999999999999999998899999999999984 444331 12345677764
Q ss_pred ccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHH
Q psy744 291 TDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLV 344 (405)
Q Consensus 291 ~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~ 344 (405)
.+++.++++++++.++++.|.+++.+++||+|+ |+++|+||..||++++.
T Consensus 81 ---~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g~~~Giit~~dil~~l~ 130 (133)
T 1y5h_A 81 ---RDSIYYVDANASIQEMLNVMEEHQVRRVPVISE-HRLVGIVTEADIARHLP 130 (133)
T ss_dssp ---TTCCCCEETTCCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHTCC
T ss_pred ---cCCCEEECCCCCHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHH
Confidence 468889999999999999999999999999996 99999999999999875
No 41
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.74 E-value=3e-17 Score=141.28 Aligned_cols=124 Identities=15% Similarity=0.214 Sum_probs=106.8
Q ss_pred cccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhccc-------cchhhhHH
Q psy744 212 KTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTY-------TNLDVTLK 284 (405)
Q Consensus 212 ~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~-------~~l~~~v~ 284 (405)
.+++++|. ++++++.+++++.+|++.|.+.+++++||+|++|+++|+|+..|+++....... .....++.
T Consensus 5 ~~v~dim~---~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~~v~ 81 (160)
T 2o16_A 5 IKVEDMMT---RHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQESSLQRSAQGDSLAFETPLF 81 (160)
T ss_dssp CBGGGTSE---ESCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHCC---------CCCBHH
T ss_pred CcHHHHhc---CCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHHhhcccccccchhcccCHH
Confidence 47888883 688999999999999999999999999999988999999999999987654210 11234566
Q ss_pred HhhhccccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHh
Q psy744 285 EANEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVL 345 (405)
Q Consensus 285 ~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~ 345 (405)
++ |.+++.++++++++.+|++.|.+++++.+||+|+ |+++|+||..||++++..
T Consensus 82 ~i------m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGiit~~dil~~~~~ 135 (160)
T 2o16_A 82 EV------MHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAK-DVLVGIITDSDFVTIAIN 135 (160)
T ss_dssp HH------SCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEET-TEEEEEECHHHHHHHHHH
T ss_pred HH------hcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEEC-CEEEEEEEHHHHHHHHHH
Confidence 65 5578899999999999999999999999999996 999999999999998774
No 42
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.74 E-value=2e-17 Score=140.48 Aligned_cols=119 Identities=16% Similarity=0.276 Sum_probs=105.1
Q ss_pred cccccccccccC--CeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhccccchhhhHHHhhhc
Q psy744 212 KTLRDLKIGTYE--NVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDVTLKEANEH 289 (405)
Q Consensus 212 ~~v~~i~~~~~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~~~ 289 (405)
.+++++|. + +++++.+++++.+|++.|.+++++++||+|++|+++|+||..|+++.+..+. .....++.++
T Consensus 28 ~~v~dim~---~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~-~~~~~~v~~~--- 100 (149)
T 3k2v_A 28 LRVNDIMH---TGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVFDTGV-DMRDASIADV--- 100 (149)
T ss_dssp SBGGGTSB---CGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHHCSSS-CCTTCBHHHH---
T ss_pred cCHHHHhc---CCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHHhcCC-CcccCcHHHH---
Confidence 48899994 5 7899999999999999999999999999999999999999999998876542 2245667776
Q ss_pred cccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHH
Q psy744 290 KTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILV 341 (405)
Q Consensus 290 ~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~ 341 (405)
|.+++.++++++++.++++.|.+++++++||+|++ +++|+||..||++
T Consensus 101 ---m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-~~~Giit~~dil~ 148 (149)
T 3k2v_A 101 ---MTRGGIRIRPGTLAVDALNLMQSRHITCVLVADGD-HLLGVVHMHDLLR 148 (149)
T ss_dssp ---SEESCCEECTTCBHHHHHHHHHHHTCSEEEEEETT-EEEEEEEHHHHTC
T ss_pred ---cCCCCeEECCCCCHHHHHHHHHHcCCCEEEEecCC-EEEEEEEHHHhhc
Confidence 55788999999999999999999999999999954 9999999999975
No 43
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.74 E-value=1.4e-17 Score=141.22 Aligned_cols=128 Identities=17% Similarity=0.291 Sum_probs=105.0
Q ss_pred cccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhcc------------ccch
Q psy744 212 KTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKT------------YTNL 279 (405)
Q Consensus 212 ~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~------------~~~l 279 (405)
.+++++|... .+++++.+++++.+|++.|.+++++++||+|++|+++|+|+..|+++...... ....
T Consensus 5 ~~v~~im~~~-~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 83 (152)
T 4gqw_A 5 YTVGEFMTKK-EDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLSKTN 83 (152)
T ss_dssp SBGGGTSEES-TTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTTCC----CCHHHHHHHTC-----
T ss_pred EEhhhccCCC-CCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHHhhcccCcccchHHHHHHHHHhc
Confidence 4788888421 27899999999999999999999999999999899999999999986432110 0112
Q ss_pred hhhHHHhhhccccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhC
Q psy744 280 DVTLKEANEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVLK 346 (405)
Q Consensus 280 ~~~v~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~~ 346 (405)
..++.++ |.+++.++.+++++.++++.|.+++++++||+|++|+++|+||.+||++++...
T Consensus 84 ~~~v~~~------m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~~~ 144 (152)
T 4gqw_A 84 GKLVGDL------MTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQI 144 (152)
T ss_dssp CCBHHHH------SEESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHHC-
T ss_pred cccHHHh------cCCCceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHHhc
Confidence 3355555 557788999999999999999999999999999899999999999999999854
No 44
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.73 E-value=2.8e-18 Score=158.21 Aligned_cols=213 Identities=15% Similarity=0.219 Sum_probs=138.2
Q ss_pred hcccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCCC-----CCCHHHH
Q psy744 84 FHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSS-----SITMEEL 158 (405)
Q Consensus 84 ~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~-----~~~~~~l 158 (405)
..++.|+| +.+++++.++.++.+|++.|.+++++.+||+|++ ++++|++|..|+++.+....... ..+..++
T Consensus 6 ~~~v~~im--~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~-~~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~v 82 (245)
T 3l2b_A 6 KLKVEDLE--MDKIAPLAPEVSLKMAWNIMRDKNLKSIPVADGN-NHLLGMLSTSNITATYMDIWDSNILAKSATSLDNI 82 (245)
T ss_dssp CCBGGGSC--CBCCCCBCTTCBHHHHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHHH
T ss_pred cCcHHHhc--CCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCC-CEEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHHH
Confidence 45788999 6679999999999999999999999999999987 89999999999998876432111 1112221
Q ss_pred hhccHHHHHHhcCCCEEEEEeC-----CCC-EEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCC
Q psy744 159 EEHKLETNLIDYKIHRLPVIDE-----MGN-VLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEET 232 (405)
Q Consensus 159 ~~~~i~~~l~~~~i~~lpVvd~-----~~~-vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~ 232 (405)
.. . .+ ..+..-.. .|+ ++|-.+ ...+.+.+. ...++.+ .+
T Consensus 83 ~~-----~---l~-~~~l~~~~~~~~~~g~~~i~a~~---------------------~~~~~~~~~--~~~ivIv-gd- 128 (245)
T 3l2b_A 83 LD-----T---LS-AEAQNINEERKVFPGKVVVAAMQ---------------------AESLKEFIS--EGDIAIA-GD- 128 (245)
T ss_dssp HH-----H---TT-CEEEECCTTCCCCCSCEEECCSC---------------------GGGGGGTCC--TTCEEEE-CS-
T ss_pred HH-----H---hC-CEEEeccCCcceeeeeEEEEeCC---------------------hHHHHhcCC--CCCEEEE-CC-
Confidence 11 0 00 01100000 000 011111 112222221 1334444 33
Q ss_pred CHHHHHHHHHhcCCCEEEEECCC------------CcEEEEEeHHHHHHHHHhccccchhhhHHHhhhccccCc-cCceE
Q psy744 233 SIIHALRKFLERRVSALPMTDSE------------GHLVDIFAKFDVINLAAEKTYTNLDVTLKEANEHKTDWF-EGVEK 299 (405)
Q Consensus 233 ~l~~a~~~m~~~~~~~lpVvd~~------------g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~~~~~~~~-~~~~~ 299 (405)
-.++...+.+.+.+++++++.. +.+..+.+..|........ ....+++++ |. +++.+
T Consensus 129 -r~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~~~~~~~i~t~~d~~~~~~~~---~~~~~v~~i------m~~~~~~~ 198 (245)
T 3l2b_A 129 -RAEIQAELIELKVSLLIVTGGHTPSKEIIELAKKNNITVITTPHDSFTASRLI---VQSLPVDYV------MTKDNLVA 198 (245)
T ss_dssp -CHHHHHHHHHTTCSEEEECTTCCCCHHHHHHHHHHTCEEEECSSCHHHHHHHG---GGGSBHHHH------SBCTTCCC
T ss_pred -CHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHcCCeEEEeCCChHHHHHHH---hcCCceeeE------ecCCccEE
Confidence 3688888999999999888642 2345566666655443322 123445555 66 78999
Q ss_pred ecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHH
Q psy744 300 CLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYL 343 (405)
Q Consensus 300 v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l 343 (405)
+++++++.++++.|.+++++++||+|++|+++|+||.+||+++.
T Consensus 199 ~~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dll~~~ 242 (245)
T 3l2b_A 199 VSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIARFHLISTH 242 (245)
T ss_dssp EETTSBHHHHHHHHHHHCCSEEEEECTTCBEEEEEECC------
T ss_pred ECCCCcHHHHHHHHHhcCCceEEEEcCCCeEEEEEEHHHhhchh
Confidence 99999999999999999999999999899999999999999865
No 45
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.73 E-value=1.5e-17 Score=142.77 Aligned_cols=136 Identities=17% Similarity=0.262 Sum_probs=112.0
Q ss_pred HHHHHhhhcccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCCCCCCHH
Q psy744 77 IFVKFFKFHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSITME 156 (405)
Q Consensus 77 ~~~~~l~~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~ 156 (405)
.+.+|+ ..+..++|....++++++++.|+.+|+++|.+++++++||+|++ ++++|++|..|+++++...... .
T Consensus 8 ~~e~~l-~~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~-~~lvGiit~~Di~~~~~~~~~~----~- 80 (156)
T 3k6e_A 8 EFETFL-LGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDE-KQFVGTIGLRDIMAYQMEHDLS----Q- 80 (156)
T ss_dssp HHHHHH-HTTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTCC----H-
T ss_pred HHHHHh-hccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCC-CcEEEEEEecchhhhhhhcccc----c-
Confidence 355565 45678899878899999999999999999999999999999987 8999999999999776543100 0
Q ss_pred HHhhccHHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHH
Q psy744 157 ELEEHKLETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIH 236 (405)
Q Consensus 157 ~l~~~~i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~ 236 (405)
......+++++| .+++.++.+++++.+
T Consensus 81 --------------------------------------------------~~~~~~~v~~im---~~~~~~v~~~~~l~~ 107 (156)
T 3k6e_A 81 --------------------------------------------------EIMADTDIVHMT---KTDVAVVSPDFTITE 107 (156)
T ss_dssp --------------------------------------------------HHHTTSBGGGTC---BCSCCCBCTTCCHHH
T ss_pred --------------------------------------------------ccccccCHHHhh---cCCceecccccHHHH
Confidence 011244788888 488999999999999
Q ss_pred HHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhc
Q psy744 237 ALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEK 274 (405)
Q Consensus 237 a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~ 274 (405)
|++.|.+++ .+||+|++|+++|+||.+|+++++...
T Consensus 108 ~~~~m~~~~--~lpVVd~~g~l~GiiT~~Dil~~~~~~ 143 (156)
T 3k6e_A 108 VLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNAL 143 (156)
T ss_dssp HHHHTTTSS--EEEEECTTSBEEEEEEHHHHHHHHHHH
T ss_pred HHHHHHHcC--CeEEEecCCEEEEEEEHHHHHHHHHHH
Confidence 999998765 499999999999999999999988653
No 46
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.73 E-value=6.4e-17 Score=138.61 Aligned_cols=128 Identities=18% Similarity=0.245 Sum_probs=109.0
Q ss_pred cccccccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCE-EEEECCCCcEEEEEeHHHHHHHHHhc------------
Q psy744 208 SFLNKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSA-LPMTDSEGHLVDIFAKFDVINLAAEK------------ 274 (405)
Q Consensus 208 ~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~-lpVvd~~g~lvGivt~~Dl~~~~~~~------------ 274 (405)
.+...+++++| .++++++.+++++.+|++.|.+++++. +||+|++ +++|+||..|+++.....
T Consensus 12 ~~~~~~v~~im---~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~-~~vGivt~~dl~~~~~~~~~~~~~~~~~~~ 87 (157)
T 1o50_A 12 HMKVKDVCKLI---SLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDN-KLVGMIPVMHLLKVSGFHFFGFIPKEELIR 87 (157)
T ss_dssp TCBHHHHTTSS---CCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEETT-EEEEEEEHHHHHHHHHHHHHCCCC------
T ss_pred hhccccHhhcc---cCCCceECCCCCHHHHHHHHHhCCCCccEEEEECC-EEEEEEEHHHHHHHHhhhHHhhhccHHHHH
Confidence 44466888998 478999999999999999999999999 9999987 999999999999875421
Q ss_pred --cccchhhhHHHhhhccccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhC
Q psy744 275 --TYTNLDVTLKEANEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVLK 346 (405)
Q Consensus 275 --~~~~l~~~v~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~~ 346 (405)
.......++.++ |.+ +.++++++++.+|++.|.+++++++||+|++|+++|+||..||++++...
T Consensus 88 ~~~~~~~~~~v~~i------m~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~l~~~ 154 (157)
T 1o50_A 88 SSMKRLIAKNASEI------MLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLALWKG 154 (157)
T ss_dssp -CCCCCSSCBHHHH------CBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHS
T ss_pred HHHHHHcCCcHHHH------cCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHHHHHh
Confidence 001224456665 556 88999999999999999999999999999889999999999999999754
No 47
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.73 E-value=2e-17 Score=141.48 Aligned_cols=130 Identities=17% Similarity=0.176 Sum_probs=108.1
Q ss_pred cccccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhccccc---hhhhHHHh
Q psy744 210 LNKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTN---LDVTLKEA 286 (405)
Q Consensus 210 ~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~~~---l~~~v~~~ 286 (405)
...+++++|... ++++++.+++++.+|++.|.+++++++||+|++|+++|+||.+|+++......... ...++.+
T Consensus 13 ~~~~v~dim~p~-~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~v~~- 90 (156)
T 3ctu_A 13 LLGQEETFLTPA-KNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVH- 90 (156)
T ss_dssp HHTTGGGGEEEG-GGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGG-
T ss_pred HHHHHHHHcCcc-cCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHhccccccccccCcHHH-
Confidence 355889998422 67899999999999999999999999999999999999999999998887542211 1233444
Q ss_pred hhccccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhCCC
Q psy744 287 NEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVLKPS 348 (405)
Q Consensus 287 ~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~~~~ 348 (405)
.|.+++.++.+++++.+|++.|.+++ ++||+|++|+++|+||.+||++++.....
T Consensus 91 -----~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~dil~~l~~~~~ 145 (156)
T 3ctu_A 91 -----MTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNALLH 145 (156)
T ss_dssp -----GCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETTHHHHHHHHHSC
T ss_pred -----hccCCceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHHHHHHHHHHHHH
Confidence 46678899999999999999999886 79999989999999999999999986543
No 48
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.72 E-value=1.6e-17 Score=145.24 Aligned_cols=127 Identities=20% Similarity=0.324 Sum_probs=104.3
Q ss_pred ccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhcc---------------c-
Q psy744 213 TLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKT---------------Y- 276 (405)
Q Consensus 213 ~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~---------------~- 276 (405)
+++++|... .+++++.+++++.+|++.|.+++++++||+|++|+++|+|+..|+++...... +
T Consensus 5 ~v~dim~~~-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (180)
T 3sl7_A 5 TVGDFMTPR-QNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTWK 83 (180)
T ss_dssp BHHHHSEEG-GGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTCC-------------------CCC
T ss_pred eHHHhcCCC-CCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHhhhhhccccCCcccccccccchhh
Confidence 677788411 27899999999999999999999999999999999999999999985321100 0
Q ss_pred ----------cchhhhHHHhhhccccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhC
Q psy744 277 ----------TNLDVTLKEANEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVLK 346 (405)
Q Consensus 277 ----------~~l~~~v~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~~ 346 (405)
.....++.++ |.+++.++.+++++.+|++.|.+++++++||+|++|+++|+||..||++++...
T Consensus 84 ~~~~~~~~~~~~~~~~v~~~------m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~~~~~ 157 (180)
T 3sl7_A 84 TFNELQKLISKTYGKVVGDL------MTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQI 157 (180)
T ss_dssp SHHHHHHHHHTTTTCBHHHH------SEESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHHHHHH
T ss_pred hhHHHHHHHhccccccHHHH------hCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHH
Confidence 0113345554 567889999999999999999999999999999899999999999999999853
No 49
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.71 E-value=2.4e-17 Score=141.32 Aligned_cols=118 Identities=17% Similarity=0.252 Sum_probs=102.3
Q ss_pred ccccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCC-cEEEEEeHHHHHHHHHhccccchhhhHHHhhhc
Q psy744 211 NKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEG-HLVDIFAKFDVINLAAEKTYTNLDVTLKEANEH 289 (405)
Q Consensus 211 ~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g-~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~~~ 289 (405)
..+++++|... .+++++.+++++.+|++.|.+++++++||+|+++ +++|+||.+|++++...+ ...++.++|
T Consensus 37 ~~~v~diM~~~-~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~----~~~~v~~im-- 109 (156)
T 3oi8_A 37 DLEVRDAMITR-SRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFNP----EQFHLKSIL-- 109 (156)
T ss_dssp TCBGGGTCEEG-GGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSSCG----GGCCHHHHC--
T ss_pred CCCHhheeeeH-HHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHcC----CcccHHHHc--
Confidence 45889999421 3789999999999999999999999999999874 999999999998765432 245677764
Q ss_pred cccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHH
Q psy744 290 KTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDIL 340 (405)
Q Consensus 290 ~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl 340 (405)
.++.++++++++.+|++.|.+++.+.+||+|++|+++|+||..||+
T Consensus 110 -----~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 110 -----RPAVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDII 155 (156)
T ss_dssp -----BCCCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHHHC
T ss_pred -----CCCEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHHhc
Confidence 3478999999999999999999999999999999999999999986
No 50
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.71 E-value=8.3e-17 Score=137.59 Aligned_cols=130 Identities=18% Similarity=0.231 Sum_probs=107.2
Q ss_pred cccccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhccc----cchhhhHHH
Q psy744 210 LNKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTY----TNLDVTLKE 285 (405)
Q Consensus 210 ~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~----~~l~~~v~~ 285 (405)
...+++++|... ++++++.+++++.+|++.|.+++++++||+|++|+++|+||..|+++....... .....++.+
T Consensus 9 ~~~~v~~im~~~-~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v~~ 87 (157)
T 2emq_A 9 MQMTVKPFLIPA-DKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAILGLERIEFERLETMKVEE 87 (157)
T ss_dssp -CCBSTTTCEEG-GGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHHSBCSSSBCGGGGGTCBGGG
T ss_pred hhCcHHhhccCC-ccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHHHhcccccchHHhcCCcHHH
Confidence 355888888410 278899999999999999999999999999988999999999999987654210 011223333
Q ss_pred hhhccccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhCCC
Q psy744 286 ANEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVLKPS 348 (405)
Q Consensus 286 ~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~~~~ 348 (405)
.|.+++.++++++++.++++.|.++++ +||+|++|+++|+||..||++++.....
T Consensus 88 ------~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~dil~~~~~~~~ 142 (157)
T 2emq_A 88 ------VMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRREVLKQLNKQLH 142 (157)
T ss_dssp ------TCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHHHHHHHHHTTC
T ss_pred ------HhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHHHHHHHHHHhh
Confidence 466889999999999999999999987 9999988999999999999999986554
No 51
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.71 E-value=9.1e-17 Score=144.20 Aligned_cols=121 Identities=14% Similarity=0.191 Sum_probs=106.2
Q ss_pred ccccccccccccCCeeEEcCCCCHHHHHHHHHhc---CCCEEEEECCCCcEEEEEeHHHHHHHHHhccccchhhhHHHhh
Q psy744 211 NKTLRDLKIGTYENVETVAEETSIIHALRKFLER---RVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDVTLKEAN 287 (405)
Q Consensus 211 ~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~---~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~ 287 (405)
..+++++| .++++++.++.++.+|++.|.+. +++.+||+|++|+++|+||.+|++... ...++.++
T Consensus 53 ~~~v~~iM---~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~~-------~~~~v~~i- 121 (205)
T 3kxr_A 53 ENEIGRYT---DHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIFKHE-------PHEPLISL- 121 (205)
T ss_dssp TTCGGGGC---BCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTTSC-------TTSBGGGG-
T ss_pred cchHHhhc---cCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHhCC-------CcchHHHH-
Confidence 45889999 47899999999999999999987 789999999999999999999997531 13344444
Q ss_pred hccccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhCC
Q psy744 288 EHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVLKP 347 (405)
Q Consensus 288 ~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~~~ 347 (405)
|.+++.++++++++.++++.|.+++++.+||||++|+++|+||..||++.+..+.
T Consensus 122 -----m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i~~e~ 176 (205)
T 3kxr_A 122 -----LSEDSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTLRAATALVREHY 176 (205)
T ss_dssp -----CCSSCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHHHHHH
T ss_pred -----hcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHHHHHH
Confidence 6688999999999999999999999999999999999999999999999998543
No 52
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.70 E-value=7.8e-17 Score=138.29 Aligned_cols=129 Identities=15% Similarity=0.220 Sum_probs=108.2
Q ss_pred cccccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhccc----cchhhhHHH
Q psy744 210 LNKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTY----TNLDVTLKE 285 (405)
Q Consensus 210 ~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~----~~l~~~v~~ 285 (405)
...+++++|... .+++++.+++++.+|++.|.+++++++||+|++|+++|+||..|++........ .....++.+
T Consensus 12 ~~~~v~~im~~~-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~v~~ 90 (159)
T 1yav_A 12 LEATVGQFMIEA-DKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFGLERIEFEKLDQITVEE 90 (159)
T ss_dssp TTCBHHHHSEEG-GGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHBCSSSBCGGGTTTSBHHH
T ss_pred hHhhHHHHhCCc-cceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhhhhcccchhhhccCCHHH
Confidence 356888888410 278999999999999999999999999999988999999999999987754210 012445666
Q ss_pred hhhccccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhCC
Q psy744 286 ANEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVLKP 347 (405)
Q Consensus 286 ~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~~~ 347 (405)
+ |.+++.++.+++++.++++.|.++++ +||+|++|+++|+||..||++++....
T Consensus 91 ~------m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~~dil~~~~~~~ 144 (159)
T 1yav_A 91 V------MLTDIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTRRVVLKELNKHI 144 (159)
T ss_dssp H------SBCSCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEHHHHHHHHHHHC
T ss_pred h------cCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEHHHHHHHHHHHH
Confidence 5 55788999999999999999999877 999998899999999999999998644
No 53
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.70 E-value=2.9e-16 Score=133.04 Aligned_cols=127 Identities=14% Similarity=0.201 Sum_probs=109.5
Q ss_pred hhhcccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHhhc
Q psy744 82 FKFHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEEH 161 (405)
Q Consensus 82 l~~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~~ 161 (405)
+...++.|+|....++++++++.++.+|++.|.++++..+||+|++.++++|++|..|++..+....
T Consensus 20 l~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~------------- 86 (148)
T 3lv9_A 20 FEEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINEN------------- 86 (148)
T ss_dssp GGTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS-------------
T ss_pred cCCCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcCC-------------
Confidence 4577999999554589999999999999999999999999999986468999999999986654320
Q ss_pred cHHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHHHHH
Q psy744 162 KLETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRKF 241 (405)
Q Consensus 162 ~i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m 241 (405)
..+++++| +++.++.+++++.++++.|
T Consensus 87 -------------------------------------------------~~~v~~~m----~~~~~v~~~~~l~~~~~~m 113 (148)
T 3lv9_A 87 -------------------------------------------------KIELEEIL----RDIIYISENLTIDKALERI 113 (148)
T ss_dssp -------------------------------------------------CCCGGGTC----BCCEEEETTSBHHHHHHHH
T ss_pred -------------------------------------------------CccHHHhc----CCCeEECCCCCHHHHHHHH
Confidence 22566777 5789999999999999999
Q ss_pred HhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhc
Q psy744 242 LERRVSALPMTDSEGHLVDIFAKFDVINLAAEK 274 (405)
Q Consensus 242 ~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~ 274 (405)
.+++.+.+||+|++|+++|+||..|+++.+...
T Consensus 114 ~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~~ 146 (148)
T 3lv9_A 114 RKEKLQLAIVVDEYGGTSGVVTIEDILEEIVGE 146 (148)
T ss_dssp HHHTCSEEEEECTTSSEEEEEEHHHHHHHHHHT
T ss_pred HhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCc
Confidence 999999999999999999999999999987653
No 54
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.70 E-value=1e-16 Score=144.72 Aligned_cols=159 Identities=18% Similarity=0.162 Sum_probs=105.4
Q ss_pred cccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhccccchhhhHHHhhhccc
Q psy744 212 KTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDVTLKEANEHKT 291 (405)
Q Consensus 212 ~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~~~~~ 291 (405)
.+++++| .++++++.+++++.+|++.|.+++++++||+|++|+++|+||.+|+.+... +.++.+
T Consensus 13 ~~~~~~~---~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~~~~~-------~~~v~~------ 76 (213)
T 1vr9_A 13 MKVKKWV---TQDFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLLDLDL-------DSSVFN------ 76 (213)
T ss_dssp CBGGGGC---BSCSCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGTTSCT-------TSBSGG------
T ss_pred cCHHHhh---cCCCeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHHhhcC-------CCcHHH------
Confidence 4667777 488999999999999999999999999999998899999999999976432 223333
Q ss_pred cCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhCCCCCCCCccCCCCCCCCCCCCCCcC
Q psy744 292 DWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVLKPSDDDIGVDETSSDSEVPVDPDLAS 371 (405)
Q Consensus 292 ~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (405)
.|.+++.++.+++++.+|++.|.+++++++||+|++|+++|+||.+||++.+........ ....+.......+
T Consensus 77 im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~~~~~~~---~~~~l~~~~~~~~---- 149 (213)
T 1vr9_A 77 KVSLPDFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIEALAMDV---PGIRFSVLLEDKP---- 149 (213)
T ss_dssp GCBCTTCCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHHSCC-----------------------
T ss_pred HccCCCEEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHhcCCC---CcEEEEEEeCCCC----
Confidence 366789999999999999999999999999999988999999999999999875442111 0111111000000
Q ss_pred CcccccccCCccccccccCccccccccc
Q psy744 372 SDDKVFEENEEPRDYVQNSCWGEVPVSD 399 (405)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (405)
..-.++.+++.+.+.+.+||.+
T Consensus 150 ------~~l~~~~~~l~~~~~~~l~V~~ 171 (213)
T 1vr9_A 150 ------GELRKVVDALALSNINILSVIT 171 (213)
T ss_dssp ----------------------------
T ss_pred ------ccHHHHHHHHHHCCCcEEEEEE
Confidence 0134666778888888888875
No 55
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.69 E-value=1.2e-16 Score=132.50 Aligned_cols=127 Identities=9% Similarity=0.146 Sum_probs=106.2
Q ss_pred hhhcccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHhhc
Q psy744 82 FKFHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEEH 161 (405)
Q Consensus 82 l~~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~~ 161 (405)
|...++.|+|....++++++++.++.+|++.|.++++..+||+|++.++++|++|..|+++.+....
T Consensus 3 l~~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~------------- 69 (130)
T 3i8n_A 3 AQDVPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGS------------- 69 (130)
T ss_dssp ----CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTT-------------
T ss_pred cCcCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCC-------------
Confidence 5678899999666778899999999999999999999999999975579999999999996654210
Q ss_pred cHHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHHHHH
Q psy744 162 KLETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRKF 241 (405)
Q Consensus 162 ~i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m 241 (405)
...+++++| +++.++.+++++.++++.|
T Consensus 70 ------------------------------------------------~~~~v~~~m----~~~~~v~~~~~l~~~~~~m 97 (130)
T 3i8n_A 70 ------------------------------------------------GQKQLGAVM----RPIQVVLNNTALPKVFDQM 97 (130)
T ss_dssp ------------------------------------------------TTSBHHHHS----EECCEEETTSCHHHHHHHH
T ss_pred ------------------------------------------------CcCCHHHHh----cCCcCcCCCCcHHHHHHHH
Confidence 023566666 3578999999999999999
Q ss_pred HhcCCCEEEEECCCCcEEEEEeHHHHHHHHHh
Q psy744 242 LERRVSALPMTDSEGHLVDIFAKFDVINLAAE 273 (405)
Q Consensus 242 ~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~ 273 (405)
.+++.+.+||+|++|+++|+||..|+++.+.+
T Consensus 98 ~~~~~~~~~Vvd~~g~~vGivt~~dil~~l~g 129 (130)
T 3i8n_A 98 MTHRLQLALVVDEYGTVLGLVTLEDIFEHLVG 129 (130)
T ss_dssp HHHTCCEEEEECTTSCEEEEEEHHHHHHHHHT
T ss_pred HHcCCeEEEEEcCCCCEEEEEEHHHHHHHHcC
Confidence 99999999999999999999999999987653
No 56
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.69 E-value=6.9e-17 Score=134.07 Aligned_cols=127 Identities=14% Similarity=0.160 Sum_probs=105.5
Q ss_pred cccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHhhccHH
Q psy744 85 HKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEEHKLE 164 (405)
Q Consensus 85 ~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~~~i~ 164 (405)
.++.|+|....++++++++.++.+|++.|.++++.++||++++.++++|++|..|+++.+....
T Consensus 2 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~---------------- 65 (130)
T 3hf7_A 2 VSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKK---------------- 65 (130)
T ss_dssp CBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSS----------------
T ss_pred cCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccC----------------
Confidence 4678888555679999999999999999999999999999764489999999999996653210
Q ss_pred HHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHHHHHHhc
Q psy744 165 TNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRKFLER 244 (405)
Q Consensus 165 ~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~ 244 (405)
.+...+++++| +++.++.+++++.++++.|.++
T Consensus 66 -------------------------------------------~~~~~~v~~~m----~~~~~v~~~~~l~~~~~~m~~~ 98 (130)
T 3hf7_A 66 -------------------------------------------EFTKEIMLRAA----DEIYFVPEGTPLSTQLVKFQRN 98 (130)
T ss_dssp -------------------------------------------CCCHHHHHHHS----BCCCEEETTCBHHHHHHHHHHH
T ss_pred -------------------------------------------ccchhhHHHhc----cCCeEeCCCCcHHHHHHHHHhc
Confidence 00122456666 5678999999999999999999
Q ss_pred CCCEEEEECCCCcEEEEEeHHHHHHHHHhc
Q psy744 245 RVSALPMTDSEGHLVDIFAKFDVINLAAEK 274 (405)
Q Consensus 245 ~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~ 274 (405)
+.+.+||+|++|+++|+||..|+++.+.+.
T Consensus 99 ~~~~~~Vvd~~g~lvGiit~~Dil~~l~g~ 128 (130)
T 3hf7_A 99 KKKVGLVVDEYGDIQGLVTVEDILEEIVGD 128 (130)
T ss_dssp CCCEEEEECTTSCEEEEEEHHHHHHHHHC-
T ss_pred CCeEEEEEcCCCCEEEEeeHHHHHHHHhCC
Confidence 999999999999999999999999987643
No 57
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.69 E-value=3.7e-16 Score=134.28 Aligned_cols=131 Identities=12% Similarity=0.155 Sum_probs=106.4
Q ss_pred ccccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECC--CCcEEEEEeHHHHHHHHHhcccc---chhhhHHH
Q psy744 211 NKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDS--EGHLVDIFAKFDVINLAAEKTYT---NLDVTLKE 285 (405)
Q Consensus 211 ~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~--~g~lvGivt~~Dl~~~~~~~~~~---~l~~~v~~ 285 (405)
..+++++|. ++++++.+++++.+|++.|.+++++++||+|+ +|+++|+||..|+++........ ....++.+
T Consensus 12 ~~~v~dim~---~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~v~~ 88 (164)
T 2pfi_A 12 HVRVEHFMN---HSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSRAPGHQQCLQD 88 (164)
T ss_dssp SCBHHHHCB---CCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC-------CCCCBHHH
T ss_pred CCCHHHHcC---CCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccccCCcccchhhh
Confidence 457888884 68899999999999999999999999999996 79999999999999877543211 11345666
Q ss_pred hhhccccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHh
Q psy744 286 ANEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVL 345 (405)
Q Consensus 286 ~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~ 345 (405)
++.........+.++++++++.++++.|.+++.+++||+| +|+++|+||..||++++..
T Consensus 89 ~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~l~Giit~~dil~~~~~ 147 (164)
T 2pfi_A 89 ILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS-RGRAVGCVSWVEMKKAISN 147 (164)
T ss_dssp HHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHHHH
T ss_pred hhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEHHHHHHHHHh
Confidence 6542111111178999999999999999999999999999 7999999999999999875
No 58
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.69 E-value=1.7e-16 Score=143.31 Aligned_cols=163 Identities=17% Similarity=0.173 Sum_probs=104.4
Q ss_pred hcccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHhhccH
Q psy744 84 FHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEEHKL 163 (405)
Q Consensus 84 ~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~~~i 163 (405)
..+|.++| ..+++++.++.++.+|+++|.+++++.+||+|++ ++++|++|..|+...+.
T Consensus 12 ~~~~~~~~--~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~-~~l~Givt~~dl~~~~~------------------ 70 (213)
T 1vr9_A 12 HMKVKKWV--TQDFPMVEESATVRECLHRMRQYQTNECIVKDRE-GHFRGVVNKEDLLDLDL------------------ 70 (213)
T ss_dssp -CBGGGGC--BSCSCEEETTCBHHHHHHHHHHTTSSEEEEECTT-SBEEEEEEGGGGTTSCT------------------
T ss_pred ccCHHHhh--cCCCeEECCCCcHHHHHHHHHHCCCCEEEEEcCC-CEEEEEEEHHHHHhhcC------------------
Confidence 45888888 6789999999999999999999999999999976 89999999999872210
Q ss_pred HHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHHHHHHh
Q psy744 164 ETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRKFLE 243 (405)
Q Consensus 164 ~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~ 243 (405)
..+++++|. ++++++.+++++.+|++.|.+
T Consensus 71 -----------------------------------------------~~~v~~im~---~~~~~v~~~~~l~~a~~~m~~ 100 (213)
T 1vr9_A 71 -----------------------------------------------DSSVFNKVS---LPDFFVHEEDNITHALLLFLE 100 (213)
T ss_dssp -----------------------------------------------TSBSGGGCB---CTTCCEETTSBHHHHHHHHHH
T ss_pred -----------------------------------------------CCcHHHHcc---CCCEEECCCCcHHHHHHHHHH
Confidence 125777773 688999999999999999999
Q ss_pred cCCCEEEEECCCCcEEEEEeHHHHHHHHHhccccchhhhHHHhhhccccCcc-CceEecCCCCHHHHHHHHHHcCCCEEE
Q psy744 244 RRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDVTLKEANEHKTDWFE-GVEKCLLDETLFTVMERIVRAEVHRLV 322 (405)
Q Consensus 244 ~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~~~~~~~~~-~~~~v~~~~~l~~a~~~m~~~~~~~lp 322 (405)
++++++||+|++|+++|+||.+|+++.+..... ..+. +.+ .+.+.....++.++.+.|.+++++.++
T Consensus 101 ~~~~~lpVvd~~g~lvGiit~~Dil~~~~~~~~------~~~~------~~~l~~~~~~~~~~l~~~~~~l~~~~~~~l~ 168 (213)
T 1vr9_A 101 HQEPYLPVVDEEMRLKGAVSLHDFLEALIEALA------MDVP------GIRFSVLLEDKPGELRKVVDALALSNINILS 168 (213)
T ss_dssp CCCSEEEEECTTCBEEEEEEHHHHHHHHHHSCC-----------------------------------------------
T ss_pred hCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHhc------CCCC------cEEEEEEeCCCCccHHHHHHHHHHCCCcEEE
Confidence 999999999988999999999999988765421 0111 111 011123344599999999999999999
Q ss_pred EEcCCCc
Q psy744 323 VVDEDDH 329 (405)
Q Consensus 323 Vvd~~g~ 329 (405)
|++.+|.
T Consensus 169 V~~~~~~ 175 (213)
T 1vr9_A 169 VITTRSG 175 (213)
T ss_dssp -------
T ss_pred EEEEecC
Confidence 9865443
No 59
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.67 E-value=3e-16 Score=137.78 Aligned_cols=130 Identities=14% Similarity=0.128 Sum_probs=106.7
Q ss_pred cccccccccccc-CCeeEE--cCCCCHHHHHHHHHhcCCCEEEEE--CCCCcEEEEEeHHHHHHHHHhccc---------
Q psy744 211 NKTLRDLKIGTY-ENVETV--AEETSIIHALRKFLERRVSALPMT--DSEGHLVDIFAKFDVINLAAEKTY--------- 276 (405)
Q Consensus 211 ~~~v~~i~~~~~-~~~~~v--~~~~~l~~a~~~m~~~~~~~lpVv--d~~g~lvGivt~~Dl~~~~~~~~~--------- 276 (405)
..+++++|.... .+++++ .+++++.+|++.|.+++++++||+ |++|+++|+||..|+++.......
T Consensus 10 ~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~~~~~~ 89 (185)
T 2j9l_A 10 KTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVVSTS 89 (185)
T ss_dssp CCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSCCCTTC
T ss_pred cCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCCccccc
Confidence 457889984211 117788 999999999999999999999999 788999999999999988764310
Q ss_pred --------------cchhhhHHHhhhccccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHH
Q psy744 277 --------------TNLDVTLKEANEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVY 342 (405)
Q Consensus 277 --------------~~l~~~v~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~ 342 (405)
.....++.+ .|.+++.++.+++++.+|++.|.+++.+++||+| +|+++|+||..||+++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~v~~------im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~dll~~ 162 (185)
T 2j9l_A 90 IIYFTEHSPPLPPYTPPTLKLRN------ILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKKDVLKH 162 (185)
T ss_dssp EEECSSSCCCCCTTCCCCEECGG------GEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHH
T ss_pred eeecccCCcccccccccCccHHH------hhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHHHHHHH
Confidence 011223333 4667899999999999999999999999999999 8999999999999999
Q ss_pred HHhCC
Q psy744 343 LVLKP 347 (405)
Q Consensus 343 l~~~~ 347 (405)
+....
T Consensus 163 l~~~~ 167 (185)
T 2j9l_A 163 IAQMA 167 (185)
T ss_dssp HHHHC
T ss_pred HHHhh
Confidence 98644
No 60
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.67 E-value=1.4e-16 Score=131.96 Aligned_cols=125 Identities=14% Similarity=0.233 Sum_probs=104.4
Q ss_pred hhcccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHhhcc
Q psy744 83 KFHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEEHK 162 (405)
Q Consensus 83 ~~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~~~ 162 (405)
...++.|+|....++++++++.++.+|++.|.++++.++||+|++.++++|++|..|+++.+..
T Consensus 3 ~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~---------------- 66 (129)
T 3jtf_A 3 AERTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLE---------------- 66 (129)
T ss_dssp -CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTC----------------
T ss_pred CCCCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhcc----------------
Confidence 3567889995447889999999999999999999999999999754789999999998743210
Q ss_pred HHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHHHHHH
Q psy744 163 LETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRKFL 242 (405)
Q Consensus 163 i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~ 242 (405)
...+++++| +++.++.+++++.++++.|.
T Consensus 67 -----------------------------------------------~~~~v~~~m----~~~~~v~~~~~l~~~~~~m~ 95 (129)
T 3jtf_A 67 -----------------------------------------------PALDIRSLV----RPAVFIPEVKRLNVLLREFR 95 (129)
T ss_dssp -----------------------------------------------TTSCGGGGC----BCCCEEETTCBHHHHHHHHH
T ss_pred -----------------------------------------------CCcCHHHHh----CCCeEeCCCCcHHHHHHHHH
Confidence 022566776 45889999999999999999
Q ss_pred hcCCCEEEEECCCCcEEEEEeHHHHHHHHHhc
Q psy744 243 ERRVSALPMTDSEGHLVDIFAKFDVINLAAEK 274 (405)
Q Consensus 243 ~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~ 274 (405)
+++.+.+||+|++|+++|+||..|+++.+...
T Consensus 96 ~~~~~~~pVvd~~g~~~Giit~~Dil~~l~ge 127 (129)
T 3jtf_A 96 ASRNHLAIVIDEHGGISGLVTMEDVLEQIVGD 127 (129)
T ss_dssp TSSCCEEEEECC-CCEEEEEEHHHHHHHHHHT
T ss_pred hcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCC
Confidence 99999999999989999999999999987653
No 61
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.66 E-value=6.7e-16 Score=126.01 Aligned_cols=119 Identities=24% Similarity=0.314 Sum_probs=103.2
Q ss_pred ccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHhhccHHH
Q psy744 86 KCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEEHKLET 165 (405)
Q Consensus 86 ~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~~~i~~ 165 (405)
++.|+| +.++++++++.++.+|++.|.++++..+||+|++ ++++|++|..|+++.+...
T Consensus 2 ~v~~im--~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-~~~~G~vt~~dl~~~~~~~------------------ 60 (122)
T 3kpb_A 2 LVKDIL--SKPPITAHSNISIMEAAKILIKHNINHLPIVDEH-GKLVGIITSWDIAKALAQN------------------ 60 (122)
T ss_dssp BHHHHC--CSCCCCEETTSBHHHHHHHHHHHTCSCEEEECTT-SBEEEEECHHHHHHHHHTT------------------
T ss_pred chHHhh--CCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCC-CCEEEEEEHHHHHHHHHhc------------------
Confidence 567888 5678999999999999999999999999999977 8999999999998665421
Q ss_pred HHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHHHHHHhcC
Q psy744 166 NLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRKFLERR 245 (405)
Q Consensus 166 ~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~ 245 (405)
..++.++| .+++.++.+++++.++++.|.+++
T Consensus 61 ---------------------------------------------~~~v~~~~---~~~~~~v~~~~~l~~~~~~~~~~~ 92 (122)
T 3kpb_A 61 ---------------------------------------------KKTIEEIM---TRNVITAHEDEPVDHVAIKMSKYN 92 (122)
T ss_dssp ---------------------------------------------CCBGGGTS---BSSCCCEETTSBHHHHHHHHHHHT
T ss_pred ---------------------------------------------ccCHHHHh---cCCCeEECCCCCHHHHHHHHHHhC
Confidence 11566666 367889999999999999999999
Q ss_pred CCEEEEECCCCcEEEEEeHHHHHHHHHh
Q psy744 246 VSALPMTDSEGHLVDIFAKFDVINLAAE 273 (405)
Q Consensus 246 ~~~lpVvd~~g~lvGivt~~Dl~~~~~~ 273 (405)
.+.+||+|++|+++|+||..|+++++.+
T Consensus 93 ~~~l~Vvd~~g~~~Givt~~dl~~~l~~ 120 (122)
T 3kpb_A 93 ISGVPVVDDYRRVVGIVTSEDISRLFGG 120 (122)
T ss_dssp CSEEEEECTTCBEEEEEEHHHHHHHHC-
T ss_pred CCeEEEECCCCCEEEEEeHHHHHHHhhc
Confidence 9999999998999999999999987654
No 62
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.66 E-value=8.2e-16 Score=133.92 Aligned_cols=127 Identities=15% Similarity=0.181 Sum_probs=107.6
Q ss_pred hhhcccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHhhc
Q psy744 82 FKFHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEEH 161 (405)
Q Consensus 82 l~~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~~ 161 (405)
+...++.|+|....++++++++.++.+|++.|.++++..+||+|.+.++++|++|..|+++.+...
T Consensus 39 l~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~-------------- 104 (172)
T 3lhh_A 39 LDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESIAG-------------- 104 (172)
T ss_dssp ----CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHHTT--------------
T ss_pred cCCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHhhc--------------
Confidence 456799999954478999999999999999999999999999987557899999999998654321
Q ss_pred cHHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHHHHH
Q psy744 162 KLETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRKF 241 (405)
Q Consensus 162 ~i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m 241 (405)
...+++++| +++.++.+++++.++++.|
T Consensus 105 ------------------------------------------------~~~~v~~im----~~~~~v~~~~~l~~a~~~m 132 (172)
T 3lhh_A 105 ------------------------------------------------ERLELVDLV----KNCNFVPNSLSGMELLEHF 132 (172)
T ss_dssp ------------------------------------------------CCCCGGGGC----BCCEEEETTCCHHHHHHHH
T ss_pred ------------------------------------------------CcccHHHHh----cCCeEeCCCCCHHHHHHHH
Confidence 023677777 5789999999999999999
Q ss_pred HhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhc
Q psy744 242 LERRVSALPMTDSEGHLVDIFAKFDVINLAAEK 274 (405)
Q Consensus 242 ~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~ 274 (405)
.+++.+.+||+|++|+++|+||..|+++.+...
T Consensus 133 ~~~~~~~~pVvd~~g~lvGiit~~Dil~~l~~~ 165 (172)
T 3lhh_A 133 RTTGSQMVFVVDEYGDLKGLVTLQDMMDALTGE 165 (172)
T ss_dssp HHHTCSEEEEECTTSCEEEEEEHHHHHHHHHTT
T ss_pred HHcCCeEEEEEeCCCCEEEEeeHHHHHHHHhCC
Confidence 999999999999999999999999999988765
No 63
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.66 E-value=9.8e-16 Score=131.50 Aligned_cols=137 Identities=15% Similarity=0.242 Sum_probs=114.2
Q ss_pred hhHHHHHHhhhcccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCCCCC
Q psy744 74 GNQIFVKFFKFHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSI 153 (405)
Q Consensus 74 ~~~~~~~~l~~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~~~ 153 (405)
....+.+.+...++.|+|. . .+++.++.++.+|++.|.++++..+||+|++ ++++|++|..|+++.+...
T Consensus 6 ~~~~l~~~l~~~~v~~im~--~-~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~------ 75 (159)
T 3fv6_A 6 GTQLLADKLKKLQVKDFQS--I-PVVIHENVSVYDAICTMFLEDVGTLFVVDRD-AVLVGVLSRKDLLRASIGQ------ 75 (159)
T ss_dssp -CHHHHHHHTTCBGGGSCB--C-CCEEETTSBHHHHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHTSC------
T ss_pred hHHHHHHHHhhCCHHHHcC--C-CEEECCCCcHHHHHHHHHHCCCCEEEEEcCC-CcEEEEEeHHHHHHHhhcc------
Confidence 3556888899999999994 3 4599999999999999999999999999977 8999999999998665211
Q ss_pred CHHHHhhccHHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCC
Q psy744 154 TMEELEEHKLETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETS 233 (405)
Q Consensus 154 ~~~~l~~~~i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~ 233 (405)
......++.++|.. ..++.++.++++
T Consensus 76 -----------------------------------------------------~~~~~~~v~~~m~~-~~~~~~v~~~~~ 101 (159)
T 3fv6_A 76 -----------------------------------------------------QELTSVPVHIIMTR-MPNITVCRREDY 101 (159)
T ss_dssp -----------------------------------------------------SCTTTCBGGGTSEE-TTSCCCBCTTSB
T ss_pred -----------------------------------------------------CcccCcCHHHHHcC-CCCcEEECCCCC
Confidence 00113467787731 027899999999
Q ss_pred HHHHHHHHHhcCCCEEEEECCCC---cEEEEEeHHHHHHHHHhc
Q psy744 234 IIHALRKFLERRVSALPMTDSEG---HLVDIFAKFDVINLAAEK 274 (405)
Q Consensus 234 l~~a~~~m~~~~~~~lpVvd~~g---~lvGivt~~Dl~~~~~~~ 274 (405)
+.+|++.|.+++++++||+|++| +++|+||..||++++.+-
T Consensus 102 l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~~~ 145 (159)
T 3fv6_A 102 VMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILVSL 145 (159)
T ss_dssp HHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHHHH
Confidence 99999999999999999999888 999999999999987653
No 64
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.66 E-value=4.6e-16 Score=132.69 Aligned_cols=127 Identities=13% Similarity=0.188 Sum_probs=108.6
Q ss_pred hhhcccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeE-eCCCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHhh
Q psy744 82 FKFHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLW-DSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEE 160 (405)
Q Consensus 82 l~~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~-d~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~ 160 (405)
+...++.|+|....+++++++++++.+|++.|.+++++++||+ |++.++++|++|..|+++.+....
T Consensus 17 l~~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~~------------ 84 (153)
T 3oco_A 17 MNDKVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARIDD------------ 84 (153)
T ss_dssp HHHCBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHHT------------
T ss_pred cCCCEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcCC------------
Confidence 4567999999443479999999999999999999999999999 543379999999999997654320
Q ss_pred ccHHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHHHH
Q psy744 161 HKLETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRK 240 (405)
Q Consensus 161 ~~i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~ 240 (405)
..+++++| +++.++.+++++.+|++.
T Consensus 85 --------------------------------------------------~~~v~~~m----~~~~~v~~~~~l~~~~~~ 110 (153)
T 3oco_A 85 --------------------------------------------------KAKISTIM----RDIVSVPENMKVPDVMEE 110 (153)
T ss_dssp --------------------------------------------------TSBGGGTC----BCCEEEETTSBHHHHHHH
T ss_pred --------------------------------------------------CCcHHHHh----CCCeEECCCCCHHHHHHH
Confidence 22567777 578999999999999999
Q ss_pred HHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhc
Q psy744 241 FLERRVSALPMTDSEGHLVDIFAKFDVINLAAEK 274 (405)
Q Consensus 241 m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~ 274 (405)
|.+++.+.+||+|++|+++|+||..|+++.+...
T Consensus 111 m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~~~ 144 (153)
T 3oco_A 111 MSAHRVPMAIVIDEYGGTSGIITDKDVYEELFGN 144 (153)
T ss_dssp HHHTTCSCEEEECTTSCEEEEECHHHHHHHHHC-
T ss_pred HHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHhcc
Confidence 9999999999999999999999999999988765
No 65
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.65 E-value=1.1e-15 Score=133.32 Aligned_cols=139 Identities=11% Similarity=0.039 Sum_probs=114.1
Q ss_pred hccchhHHHHHHh--hhcccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHh
Q psy744 70 EKDGGNQIFVKFF--KFHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMY 147 (405)
Q Consensus 70 ~~~~~~~~~~~~l--~~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~ 147 (405)
+...+.+.+++.+ ...++.|+|....++++++++.++.+|++.|.++++.++||+|.+.++++|++|..|++..+...
T Consensus 19 l~~~e~~~i~~~l~l~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~~~ 98 (173)
T 3ocm_A 19 FGVEERNMVSGVLTLAERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITE 98 (173)
T ss_dssp CCHHHHHHHHHHHHHTTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHhccCCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHhcC
Confidence 3444455555443 56799999965567999999999999999999999999999987557899999999999665421
Q ss_pred hCCCCCCHHHHhhccHHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeE
Q psy744 148 YTSSSITMEELEEHKLETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVET 227 (405)
Q Consensus 148 ~~~~~~~~~~l~~~~i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~ 227 (405)
. ..+++ ++ +++++
T Consensus 99 ~--------------------------------------------------------------~~~v~-~~----~~~~~ 111 (173)
T 3ocm_A 99 G--------------------------------------------------------------RVRRN-RL----RDPII 111 (173)
T ss_dssp S--------------------------------------------------------------SCCGG-GS----BCCCE
T ss_pred C--------------------------------------------------------------cchhH-hc----CCCeE
Confidence 0 12344 33 67889
Q ss_pred EcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhcc
Q psy744 228 VAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKT 275 (405)
Q Consensus 228 v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~ 275 (405)
+.+++++.+|++.|.+++.+.+||+|++|+++|+||..|++..+....
T Consensus 112 v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lvGiIT~~Dil~~l~~~i 159 (173)
T 3ocm_A 112 VHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGEF 159 (173)
T ss_dssp ECGGGCHHHHHHHHHHSTTCCEEEECTTCCEEEEECHHHHHHHHHCCC
T ss_pred ECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEEEEEeHHHHHHHHhCcC
Confidence 999999999999999999999999999999999999999999987654
No 66
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.65 E-value=2.3e-15 Score=124.81 Aligned_cols=125 Identities=16% Similarity=0.223 Sum_probs=107.4
Q ss_pred hhcccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHhhcc
Q psy744 83 KFHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEEHK 162 (405)
Q Consensus 83 ~~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~~~ 162 (405)
...++.|+| ..++++++++.++.+|++.|.++++..+||+| + ++++|++|..|++..+....
T Consensus 2 ~~~~v~~im--~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~-~~~~Givt~~dl~~~~~~~~-------------- 63 (133)
T 2ef7_A 2 EEEIVKEYM--KTQVISVTKDAKLNDIAKVMTEKNIGSVIVVD-G-NKPVGIITERDIVKAIGKGK-------------- 63 (133)
T ss_dssp CCCBGGGTS--BCSCCEEETTCBHHHHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHHTTC--------------
T ss_pred CcccHHHhc--cCCCEEECCCCcHHHHHHHHHhcCCCEEEEEE-C-CEEEEEEcHHHHHHHHhcCC--------------
Confidence 456888999 55789999999999999999999999999999 5 89999999999986654210
Q ss_pred HHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHHHHHH
Q psy744 163 LETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRKFL 242 (405)
Q Consensus 163 i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~ 242 (405)
....+++++|. +++.++.+++++.++++.|.
T Consensus 64 ----------------------------------------------~~~~~v~~~~~---~~~~~v~~~~~l~~~~~~~~ 94 (133)
T 2ef7_A 64 ----------------------------------------------SLETKAEEFMT---ASLITIREDSPITGALALMR 94 (133)
T ss_dssp ----------------------------------------------CTTCBGGGTSE---ECCCCEETTSBHHHHHHHHH
T ss_pred ----------------------------------------------CcccCHHHHcC---CCCEEECCCCCHHHHHHHHH
Confidence 01236777773 67889999999999999999
Q ss_pred hcCCCEEEEECCCCcEEEEEeHHHHHHHHHhc
Q psy744 243 ERRVSALPMTDSEGHLVDIFAKFDVINLAAEK 274 (405)
Q Consensus 243 ~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~ 274 (405)
+++.+.+||+|++|+++|+||..|+++.+...
T Consensus 95 ~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~~ 126 (133)
T 2ef7_A 95 QFNIRHLPVVDDKGNLKGIISIRDITRAIDDM 126 (133)
T ss_dssp HHTCSEEEEECTTSCEEEEEEHHHHHHHHHHH
T ss_pred HcCCCEEEEECCCCeEEEEEEHHHHHHHHHHH
Confidence 99999999999889999999999999887654
No 67
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.64 E-value=1.3e-16 Score=133.38 Aligned_cols=127 Identities=13% Similarity=0.179 Sum_probs=104.6
Q ss_pred hcccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHhhccH
Q psy744 84 FHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEEHKL 163 (405)
Q Consensus 84 ~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~~~i 163 (405)
..++.|+|....++++++++.++.+|++.|.++++.++||+|.+.++++|++|..|+++.+...
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~---------------- 65 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKA---------------- 65 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSS----------------
T ss_pred CCChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhc----------------
Confidence 4578889954467899999999999999999999999999998646899999999988543210
Q ss_pred HHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHHHHHHh
Q psy744 164 ETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRKFLE 243 (405)
Q Consensus 164 ~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~ 243 (405)
.....+++++| +++.++.+++++.+|++.|.+
T Consensus 66 --------------------------------------------~~~~~~v~~~m----~~~~~v~~~~~l~~~~~~m~~ 97 (136)
T 3lfr_A 66 --------------------------------------------DGDSDDVKKLL----RPATFVPESKRLNVLLREFRA 97 (136)
T ss_dssp --------------------------------------------SGGGCCGGGTC----BCCCEEETTCBHHHHHHHHHH
T ss_pred --------------------------------------------cCCCcCHHHHc----CCCeEECCCCcHHHHHHHHHh
Confidence 00134677887 458999999999999999999
Q ss_pred cCCCEEEEECCCCcEEEEEeHHHHHHHHHhc
Q psy744 244 RRVSALPMTDSEGHLVDIFAKFDVINLAAEK 274 (405)
Q Consensus 244 ~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~ 274 (405)
++.+.+||+|++|+++|+||..|+++.+...
T Consensus 98 ~~~~~~~Vvd~~g~lvGiit~~Dil~~l~~~ 128 (136)
T 3lfr_A 98 NHNHMAIVIDEYGGVAGLVTIEDVLEQIVGD 128 (136)
T ss_dssp HTCCEEEEECTTSCEEEEEEHHHHHTTC---
T ss_pred cCCeEEEEEeCCCCEEEEEEHHHHHHHHhCC
Confidence 9999999999999999999999999876654
No 68
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.64 E-value=2.1e-16 Score=130.33 Aligned_cols=124 Identities=11% Similarity=0.208 Sum_probs=102.5
Q ss_pred hcccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHhhccH
Q psy744 84 FHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEEHKL 163 (405)
Q Consensus 84 ~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~~~i 163 (405)
..++.|+|....++++++++.++.+|++.|.++++.++||+|++.++++|++|..|+++.+...
T Consensus 2 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~---------------- 65 (127)
T 3nqr_A 2 DQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSD---------------- 65 (127)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTT----------------
T ss_pred CcCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcc----------------
Confidence 4577888844356899999999999999999999999999997646899999999988443210
Q ss_pred HHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHHHHHHh
Q psy744 164 ETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRKFLE 243 (405)
Q Consensus 164 ~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~ 243 (405)
....+++++| +++.++.+++++.++++.|.+
T Consensus 66 ---------------------------------------------~~~~~v~~~m----~~~~~v~~~~~l~~a~~~m~~ 96 (127)
T 3nqr_A 66 ---------------------------------------------AEAFSMDKVL----RTAVVVPESKRVDRMLKEFRS 96 (127)
T ss_dssp ---------------------------------------------CCCCCHHHHC----BCCCEEETTCBHHHHHHHHHH
T ss_pred ---------------------------------------------CCCCCHHHHc----CCCeEECCCCcHHHHHHHHHh
Confidence 0123567777 347899999999999999999
Q ss_pred cCCCEEEEECCCCcEEEEEeHHHHHHHHH
Q psy744 244 RRVSALPMTDSEGHLVDIFAKFDVINLAA 272 (405)
Q Consensus 244 ~~~~~lpVvd~~g~lvGivt~~Dl~~~~~ 272 (405)
++.+.+||+|++|+++|+||..|+++.+.
T Consensus 97 ~~~~~lpVvd~~g~~~Giit~~dll~~l~ 125 (127)
T 3nqr_A 97 QRYHMAIVIDEFGGVSGLVTIEDILELIV 125 (127)
T ss_dssp TTCCEEEEECTTSCEEEEEEHHHHHHHC-
T ss_pred cCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 99999999999999999999999998754
No 69
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.64 E-value=6.4e-16 Score=131.05 Aligned_cols=134 Identities=16% Similarity=0.230 Sum_probs=111.1
Q ss_pred HhhhcccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHhh
Q psy744 81 FFKFHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEE 160 (405)
Q Consensus 81 ~l~~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~ 160 (405)
.|...++.|+|....+++++.+++++.+|++.|.++++..+||+|++ ++++|++|..|+++.+.... ..
T Consensus 11 ~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~---~~------- 79 (150)
T 3lqn_A 11 EFQQIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPM-YKLHGLISTAMILDGILGLE---RI------- 79 (150)
T ss_dssp HHHHCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHTBCSS---SB-------
T ss_pred hhhcCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCC-CCEEEEEEHHHHHHHHHhhc---cc-------
Confidence 45678999999554679999999999999999999999999999987 89999999999996653210 00
Q ss_pred ccHHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHHHH
Q psy744 161 HKLETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRK 240 (405)
Q Consensus 161 ~~i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~ 240 (405)
........++.++|. +++.++.+++++.+|++.
T Consensus 80 --------------------------------------------~~~~~~~~~v~~~m~---~~~~~v~~~~~l~~a~~~ 112 (150)
T 3lqn_A 80 --------------------------------------------EFERLEEMKVEQVMK---QDIPVLKLEDSFAKALEM 112 (150)
T ss_dssp --------------------------------------------CGGGGGGCBGGGTCB---SSCCEEETTCBHHHHHHH
T ss_pred --------------------------------------------chhHHhcCCHHHHhc---CCCceeCCCCCHHHHHHH
Confidence 001122457888883 788999999999999999
Q ss_pred HHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhc
Q psy744 241 FLERRVSALPMTDSEGHLVDIFAKFDVINLAAEK 274 (405)
Q Consensus 241 m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~ 274 (405)
|.++++ +||+|++|+++|+||..|+++.+...
T Consensus 113 ~~~~~~--l~Vvd~~g~~~Giit~~dil~~l~~~ 144 (150)
T 3lqn_A 113 TIDHPF--ICAVNEDGYFEGILTRRAILKLLNKK 144 (150)
T ss_dssp HHHCSE--EEEECTTCBEEEEEEHHHHHHHHHHH
T ss_pred HHhCCE--EEEECCCCcEEEEEEHHHHHHHHHHH
Confidence 999886 99999999999999999999988765
No 70
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.64 E-value=1.1e-15 Score=144.15 Aligned_cols=120 Identities=19% Similarity=0.254 Sum_probs=106.7
Q ss_pred ccccccccccccCCeeEEcCCCCHHHHHHHHHhc-----CCCEEEEECCCCcEEEEEeHHHHHHHHHhccccchhhhHHH
Q psy744 211 NKTLRDLKIGTYENVETVAEETSIIHALRKFLER-----RVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDVTLKE 285 (405)
Q Consensus 211 ~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~-----~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~ 285 (405)
..+++++| .++++++.+++++.+|++.|.++ +++++||+|++|+++|+||.+|++... ...++.+
T Consensus 136 ~~~v~~iM---~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll~~~-------~~~~v~~ 205 (286)
T 2oux_A 136 DETAGAIM---TTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVND-------DDTLIAD 205 (286)
T ss_dssp TTBHHHHC---BSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHTTSC-------TTSBHHH
T ss_pred hHHHHHhC---CCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHHcCC-------CCCcHHH
Confidence 45888999 47899999999999999999987 889999999999999999999997641 2445666
Q ss_pred hhhccccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhC
Q psy744 286 ANEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVLK 346 (405)
Q Consensus 286 ~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~~ 346 (405)
+ |.+++.++++++++.++++.|.+++++.+||||++|+++|+||..||++.+..+
T Consensus 206 i------m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i~~e 260 (286)
T 2oux_A 206 I------LNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVIDDE 260 (286)
T ss_dssp H------SBSCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHH
T ss_pred H------cCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHHH
Confidence 6 557889999999999999999999999999999899999999999999998754
No 71
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.63 E-value=5e-15 Score=124.22 Aligned_cols=121 Identities=13% Similarity=0.163 Sum_probs=104.6
Q ss_pred cccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCC--eeeeEEeHHHHHHHHHHhhCCCCCCHHHHhhcc
Q psy744 85 HKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQ--QYVGMLTITDFIKILQMYYTSSSITMEELEEHK 162 (405)
Q Consensus 85 ~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~--~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~~~ 162 (405)
.++.|+| ..+++++.++.++.+|++.|.+++++.+||+|++ + +++|++|..|+++.+....
T Consensus 5 ~~v~~im--~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-~~~~~~Givt~~dl~~~~~~~~-------------- 67 (141)
T 2rih_A 5 IRTSELL--KRPPVSLPETATIREVATELAKNRVGLAVLTARD-NPKRPVAVVSERDILRAVAQRL-------------- 67 (141)
T ss_dssp CBGGGGC--CSCCEEEETTCBHHHHHHHHHHHTCSEEEEEETT-EEEEEEEEEEHHHHHHHHHTTC--------------
T ss_pred eEHHHHh--cCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCC-CcceeEEEEEHHHHHHHHhcCC--------------
Confidence 5788999 5689999999999999999999999999999986 6 9999999999986654210
Q ss_pred HHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHHHHHH
Q psy744 163 LETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRKFL 242 (405)
Q Consensus 163 i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~ 242 (405)
....++.++| .+++.++.++ ++.++++.|.
T Consensus 68 ----------------------------------------------~~~~~v~~~m---~~~~~~v~~~-~l~~a~~~m~ 97 (141)
T 2rih_A 68 ----------------------------------------------DLDGPAMPIA---NSPITVLDTD-PVHVAAEKMR 97 (141)
T ss_dssp ----------------------------------------------CTTSBSGGGC---BCCCEEETTS-BHHHHHHHHH
T ss_pred ----------------------------------------------CCCCCHHHHc---CCCCeEEcCC-CHHHHHHHHH
Confidence 0134677887 3788999999 9999999999
Q ss_pred hcCCCEEEEECCCCcEEEEEeHHHHHHHHH
Q psy744 243 ERRVSALPMTDSEGHLVDIFAKFDVINLAA 272 (405)
Q Consensus 243 ~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~ 272 (405)
+++.+.+||+|++|+++|+||..|++++..
T Consensus 98 ~~~~~~l~Vvd~~g~~~Giit~~dll~~~~ 127 (141)
T 2rih_A 98 RHNIRHVVVVNKNGELVGVLSIRDLCFERA 127 (141)
T ss_dssp HHTCSEEEEECTTSCEEEEEEHHHHHSCHH
T ss_pred HcCCeEEEEEcCCCcEEEEEEHHHHHHHHH
Confidence 999999999998899999999999987654
No 72
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.63 E-value=2e-15 Score=139.23 Aligned_cols=130 Identities=15% Similarity=0.217 Sum_probs=104.9
Q ss_pred ccccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCC--CcEEEEEeHHHHHHHHHhccc--cc--------
Q psy744 211 NKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSE--GHLVDIFAKFDVINLAAEKTY--TN-------- 278 (405)
Q Consensus 211 ~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~--g~lvGivt~~Dl~~~~~~~~~--~~-------- 278 (405)
..+++++| .++++++.+++++.+|.++|.+++++++||||++ ++++|+|+..||++++..... ..
T Consensus 12 ~~~v~diM---t~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~~ 88 (250)
T 2d4z_A 12 NIQVGDIM---VRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRISAYRRQPAAAAEA 88 (250)
T ss_dssp SCBTTSSS---BSSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHHTTSSSCCCCCCB
T ss_pred CCChHHhc---CCCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhhhhhhhhhhhhhcc
Confidence 45889999 4889999999999999999999999999999964 689999999999987653200 00
Q ss_pred ----------------------h-h-------------------------------------------------------
Q psy744 279 ----------------------L-D------------------------------------------------------- 280 (405)
Q Consensus 279 ----------------------l-~------------------------------------------------------- 280 (405)
+ +
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (250)
T 2d4z_A 89 DEEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRFE 168 (250)
T ss_dssp CCC---------------------------------------------------------------------------CC
T ss_pred cccccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCcccc
Confidence 0 0
Q ss_pred --hhHH-------Hhhh--c--c-ccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHH
Q psy744 281 --VTLK-------EANE--H--K-TDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLV 344 (405)
Q Consensus 281 --~~v~-------~~~~--~--~-~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~ 344 (405)
.... +.+. + . ..|...++++.++++|.++..+|...+++++||++ .|+|+||||+.||++++.
T Consensus 169 ~~i~~~~~~~~~~~~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~-~GrLVGIVTrkDl~kai~ 245 (250)
T 2d4z_A 169 EMLTLEEIYRWEQREKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS-MGKLVGVVALAEIQAAIE 245 (250)
T ss_dssp SCCBHHHHHHHHHHHTTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHH
T ss_pred cccChhhhhhHHHHhcCceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEE-CCEEEEEEEHHHHHHHHH
Confidence 0000 0011 1 1 24778899999999999999999999999999998 799999999999999996
No 73
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.63 E-value=2.2e-15 Score=141.52 Aligned_cols=121 Identities=18% Similarity=0.196 Sum_probs=103.1
Q ss_pred ccccccccccccCCeeEEcCCCCHHHHHHHHHhc-----CCCEEEEECCCCcEEEEEeHHHHHHHHHhccccchhhhHHH
Q psy744 211 NKTLRDLKIGTYENVETVAEETSIIHALRKFLER-----RVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDVTLKE 285 (405)
Q Consensus 211 ~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~-----~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~ 285 (405)
..+++++|. ++++++.+++++.++++.|.+. +++++||+|++|+++|+||.+|++... ...++.
T Consensus 134 ~~~v~~iM~---~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~~-------~~~~v~- 202 (278)
T 2yvy_A 134 EDEAGGLMT---PEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVAD-------PRTRVA- 202 (278)
T ss_dssp TTBGGGTCB---SCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHHHSC-------TTCBST-
T ss_pred cchHHhhcC---CCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHhcCC-------CCCcHH-
Confidence 457888984 7899999999999999999987 789999999889999999999998641 122333
Q ss_pred hhhccccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhCC
Q psy744 286 ANEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVLKP 347 (405)
Q Consensus 286 ~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~~~ 347 (405)
+.|.++++++++++++.++++.|.+++.+.+||||++|+++|+||..||++.+..+.
T Consensus 203 -----~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~Dil~~i~~e~ 259 (278)
T 2yvy_A 203 -----EIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEAEA 259 (278)
T ss_dssp -----TTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHC----
T ss_pred -----HHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHHHHHHHHHHHh
Confidence 346688999999999999999999999999999998999999999999999987543
No 74
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.62 E-value=2.1e-15 Score=125.78 Aligned_cols=128 Identities=24% Similarity=0.370 Sum_probs=107.1
Q ss_pred HHhhhcccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHH-HHHHHHhhCCCCCCHHHH
Q psy744 80 KFFKFHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDF-IKILQMYYTSSSITMEEL 158 (405)
Q Consensus 80 ~~l~~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Di-l~~l~~~~~~~~~~~~~l 158 (405)
++|...++.++| +.+++++.++.++.+|++.|.++++..+||+|++ ++++|++|..|+ ++++...
T Consensus 3 ~~l~~~~v~~im--~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~----------- 68 (138)
T 2p9m_A 3 DTLKNIKVKDVM--TKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDE-NKVIGIVTTTDIGYNLIRDK----------- 68 (138)
T ss_dssp --CTTCBGGGTS--BCSCCCEETTSBHHHHHHHHHHHTCCEEEEECTT-CBEEEEEEHHHHHHHHTTTC-----------
T ss_pred cccccCCHHHhh--cCCceEECCCCcHHHHHHHHHHCCCcEEEEECCC-CeEEEEEEHHHHHHHHHhhc-----------
Confidence 467788999999 5688999999999999999999999999999987 899999999999 7543210
Q ss_pred hhccHHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHH
Q psy744 159 EEHKLETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHAL 238 (405)
Q Consensus 159 ~~~~i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~ 238 (405)
.....+++++|. +++.++.+++++.+++
T Consensus 69 -------------------------------------------------~~~~~~v~~~m~---~~~~~v~~~~~l~~~~ 96 (138)
T 2p9m_A 69 -------------------------------------------------YTLETTIGDVMT---KDVITIHEDASILEAI 96 (138)
T ss_dssp -------------------------------------------------CCSSCBHHHHSC---SSCCCEETTSBHHHHH
T ss_pred -------------------------------------------------ccCCcCHHHHhC---CCcEEECCCCCHHHHH
Confidence 011346777773 6788999999999999
Q ss_pred HHHHhcC-----CCEEEEECCCCcEEEEEeHHHHHHHHHh
Q psy744 239 RKFLERR-----VSALPMTDSEGHLVDIFAKFDVINLAAE 273 (405)
Q Consensus 239 ~~m~~~~-----~~~lpVvd~~g~lvGivt~~Dl~~~~~~ 273 (405)
+.|.+++ .+.+||+|++|+++|+||..|+++.+.+
T Consensus 97 ~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~ 136 (138)
T 2p9m_A 97 KKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRTISK 136 (138)
T ss_dssp HHHTCC-----CCCEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred HHHHhcCCccccccEEEEECCCCeEEEEEEHHHHHHHHHh
Confidence 9999999 9999999988999999999999987654
No 75
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.62 E-value=1.7e-15 Score=129.33 Aligned_cols=135 Identities=17% Similarity=0.270 Sum_probs=111.5
Q ss_pred HHHHhhhcccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCCCCCCHHH
Q psy744 78 FVKFFKFHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSITMEE 157 (405)
Q Consensus 78 ~~~~l~~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~ 157 (405)
+.+|+ ..++.|+|....++++++++.++.+|++.|.+++++.+||+|++ ++++|++|..|+++.+...... .
T Consensus 9 ~~~l~-~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~-~~~~Giit~~dl~~~~~~~~~~----~-- 80 (156)
T 3ctu_A 9 FETFL-LGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDE-KQFVGTIGLRDIMAYQMEHDLS----Q-- 80 (156)
T ss_dssp HHHHH-HTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTCC----H--
T ss_pred HHHHH-HHHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCC-CEEEEEEcHHHHHHHHHhcccc----c--
Confidence 34444 66789999766889999999999999999999999999999987 8999999999999877642100 0
Q ss_pred HhhccHHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHH
Q psy744 158 LEEHKLETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHA 237 (405)
Q Consensus 158 l~~~~i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a 237 (405)
..+...++.++| .+++.++.+++++.+|
T Consensus 81 -------------------------------------------------~~~~~~~v~~~m---~~~~~~v~~~~~l~~a 108 (156)
T 3ctu_A 81 -------------------------------------------------EIMADTDIVHMT---KTDVAVVSPDFTITEV 108 (156)
T ss_dssp -------------------------------------------------HHHTTSBGGGGC---BCSCCCBCSSCCHHHH
T ss_pred -------------------------------------------------cccccCcHHHhc---cCCceeeCCCCcHHHH
Confidence 011244788888 3788999999999999
Q ss_pred HHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhc
Q psy744 238 LRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEK 274 (405)
Q Consensus 238 ~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~ 274 (405)
++.|.+++ ++||+|++|+++|+||..|+++.+.+.
T Consensus 109 ~~~~~~~~--~lpVvd~~g~~~Giit~~dil~~l~~~ 143 (156)
T 3ctu_A 109 LHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNAL 143 (156)
T ss_dssp HHHTTTSS--EEEEECTTSBEEEEEETTHHHHHHHHH
T ss_pred HHHHHHcC--eEEEEcCCCeEEEEEEHHHHHHHHHHH
Confidence 99999876 799999899999999999999988765
No 76
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.62 E-value=1.1e-15 Score=126.21 Aligned_cols=124 Identities=18% Similarity=0.293 Sum_probs=105.7
Q ss_pred hhcccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHhhcc
Q psy744 83 KFHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEEHK 162 (405)
Q Consensus 83 ~~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~~~ 162 (405)
.+.++.++| ..++.+++++.++.+|++.|.++++..+||+|+ ++++|++|..|+++.+...
T Consensus 3 ~s~~v~~~m--~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~--~~~~Givt~~dl~~~~~~~--------------- 63 (128)
T 3gby_A 3 ASVTFSYLA--ETDYPVFTLGGSTADAARRLAASGCACAPVLDG--ERYLGMVHLSRLLEGRKGW--------------- 63 (128)
T ss_dssp TTCBGGGGC--BCCSCCEETTSBHHHHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHTTCSSS---------------
T ss_pred cceEHHHhh--cCCcceECCCCCHHHHHHHHHHCCCcEEEEEEC--CEEEEEEEHHHHHHHHhhC---------------
Confidence 356889999 667899999999999999999999999999998 8999999999998432110
Q ss_pred HHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHHHHHH
Q psy744 163 LETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRKFL 242 (405)
Q Consensus 163 i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~ 242 (405)
.....+++++|. +++.++.+++++.++++.|.
T Consensus 64 ---------------------------------------------~~~~~~v~~~m~---~~~~~v~~~~~l~~~~~~~~ 95 (128)
T 3gby_A 64 ---------------------------------------------PTVKEKLGEELL---ETVRSYRPGEQLFDNLISVA 95 (128)
T ss_dssp ---------------------------------------------CCTTCBCCGGGC---BCCCCBCTTSBGGGSHHHHH
T ss_pred ---------------------------------------------CcccCcHHHHcc---CCCcEECCCCCHHHHHHHHH
Confidence 000236777773 67889999999999999999
Q ss_pred hcCCCEEEEECCCCcEEEEEeHHHHHHHHHh
Q psy744 243 ERRVSALPMTDSEGHLVDIFAKFDVINLAAE 273 (405)
Q Consensus 243 ~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~ 273 (405)
+++.+++||+|++|+++|+||..|+++++.+
T Consensus 96 ~~~~~~lpVvd~~g~~~Giit~~dll~~l~~ 126 (128)
T 3gby_A 96 AAKCSVVPLADEDGRYEGVVSRKRILGFLAE 126 (128)
T ss_dssp HCSSSEEEEECTTCBEEEEEEHHHHHHHHHT
T ss_pred hCCCcEEEEECCCCCEEEEEEHHHHHHHHHh
Confidence 9999999999999999999999999988754
No 77
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.62 E-value=1.6e-15 Score=130.92 Aligned_cols=130 Identities=17% Similarity=0.169 Sum_probs=109.6
Q ss_pred hhhcccccccCCC-CCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHhh
Q psy744 82 FKFHKCYDLIPTS-AKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEE 160 (405)
Q Consensus 82 l~~~~~~d~~p~s-~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~ 160 (405)
+...++.|+|... .+++++++++++.+|++.|.++++..+||+|++ ++++|++|..|+++.+.....
T Consensus 21 l~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~----------- 88 (165)
T 3fhm_A 21 GMATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDAD-GVVLGIFTERDLVKAVAGQGA----------- 88 (165)
T ss_dssp SSSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHHHHGG-----------
T ss_pred hhhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCC-CeEEEEEEHHHHHHHHHhcCC-----------
Confidence 3456788888432 468999999999999999999999999999987 899999999999977654310
Q ss_pred ccHHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHHHH
Q psy744 161 HKLETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRK 240 (405)
Q Consensus 161 ~~i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~ 240 (405)
.....++.++|. +++.++.+++++.++++.
T Consensus 89 -----------------------------------------------~~~~~~v~~~m~---~~~~~v~~~~~l~~a~~~ 118 (165)
T 3fhm_A 89 -----------------------------------------------ASLQQSVSVAMT---KNVVRCQHNSTTDQLMEI 118 (165)
T ss_dssp -----------------------------------------------GGGTSBGGGTSB---SSCCCBCTTCBHHHHHHH
T ss_pred -----------------------------------------------ccccCCHHHHhc---CCCeEECCCCcHHHHHHH
Confidence 011347788873 788999999999999999
Q ss_pred HHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhc
Q psy744 241 FLERRVSALPMTDSEGHLVDIFAKFDVINLAAEK 274 (405)
Q Consensus 241 m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~ 274 (405)
|.+++++++||+|+ |+++|+||..|+++++...
T Consensus 119 m~~~~~~~lpVvd~-g~~~Giit~~dil~~~~~~ 151 (165)
T 3fhm_A 119 MTGGRFRHVPVEEN-GRLAGIISIGDVVKARIGE 151 (165)
T ss_dssp HHHHTCSEEEEEET-TEEEEEEEHHHHHHHTTCC
T ss_pred HHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHHH
Confidence 99999999999998 9999999999999987654
No 78
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.61 E-value=8.1e-15 Score=119.94 Aligned_cols=122 Identities=13% Similarity=0.196 Sum_probs=102.6
Q ss_pred ccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHhhccHHH
Q psy744 86 KCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEEHKLET 165 (405)
Q Consensus 86 ~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~~~i~~ 165 (405)
++.|+| .+++++++++.++.+|++.|.+++++.+||+| + ++++|++|..|+++.+.....
T Consensus 2 ~v~~~m--~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~-~~~~G~it~~dl~~~~~~~~~---------------- 61 (125)
T 1pbj_A 2 RVEDVM--VTDVDTIDITASLEDVLRNYVENAKGSSVVVK-E-GVRVGIVTTWDVLEAIAEGDD---------------- 61 (125)
T ss_dssp CHHHHC--BCSCCEEETTCBHHHHHHHHHHHCCCEEEEEE-T-TEEEEEEEHHHHHHHHHHTCC----------------
T ss_pred CHHHhc--CCCceEECCCCcHHHHHHHHHHcCCCEEEEEe-C-CeeEEEEeHHHHHHHHhcCCc----------------
Confidence 456788 55889999999999999999999999999999 5 999999999999966543200
Q ss_pred HHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHHHHHHhcC
Q psy744 166 NLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRKFLERR 245 (405)
Q Consensus 166 ~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~ 245 (405)
....++.++|. +++.++.+++++.++++.|.+++
T Consensus 62 -------------------------------------------~~~~~v~~~m~---~~~~~v~~~~~l~~~~~~~~~~~ 95 (125)
T 1pbj_A 62 -------------------------------------------LAEVKVWEVME---RDLVTISPRATIKEAAEKMVKNV 95 (125)
T ss_dssp -------------------------------------------TTTSBHHHHCB---CGGGEECTTSCHHHHHHHHHHHT
T ss_pred -------------------------------------------ccccCHHHHcC---CCCeEECCCCCHHHHHHHHHhcC
Confidence 01336677773 67899999999999999999999
Q ss_pred CCEEEEECCCCcEEEEEeHHHHHHHHHhc
Q psy744 246 VSALPMTDSEGHLVDIFAKFDVINLAAEK 274 (405)
Q Consensus 246 ~~~lpVvd~~g~lvGivt~~Dl~~~~~~~ 274 (405)
++.+||+|+ |+++|++|..|+++.+.+.
T Consensus 96 ~~~l~Vvd~-~~~~Gvit~~dl~~~l~~~ 123 (125)
T 1pbj_A 96 VWRLLVEED-DEIIGVISATDILRAKMAK 123 (125)
T ss_dssp CSEEEEEET-TEEEEEEEHHHHHHHHC--
T ss_pred CcEEEEEEC-CEEEEEEEHHHHHHHHHhc
Confidence 999999998 9999999999999877543
No 79
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.61 E-value=5.3e-15 Score=125.82 Aligned_cols=130 Identities=16% Similarity=0.155 Sum_probs=104.5
Q ss_pred HHhhhcccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHh
Q psy744 80 KFFKFHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELE 159 (405)
Q Consensus 80 ~~l~~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~ 159 (405)
+.++..++.++ .+++++++++++.+|++.|.++++..+||+|++ ++++|++|..|+++.+......
T Consensus 18 ~~l~~~~v~~~----~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~-~~~vGivt~~dl~~~~~~~~~~--------- 83 (152)
T 2uv4_A 18 KSLEELQIGTY----ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEK-GRVVDIYSKFDVINLAAEKTYN--------- 83 (152)
T ss_dssp SBHHHHTCSBC----SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTT-SBEEEEEEHHHHHHHHHCSSCC---------
T ss_pred hhHHHccCCcc----CCceEeCCCCcHHHHHHHHHHcCCceEeEECCC-CcEEEEEeHHHHHHHhcchhhh---------
Confidence 34566677777 578999999999999999999999999999987 8999999999998765421100
Q ss_pred hccHHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccc---cCCeeEEcCCCCHHH
Q psy744 160 EHKLETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGT---YENVETVAEETSIIH 236 (405)
Q Consensus 160 ~~~i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~---~~~~~~v~~~~~l~~ 236 (405)
....++.++|... .+++.++.+++++.+
T Consensus 84 -------------------------------------------------~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~ 114 (152)
T 2uv4_A 84 -------------------------------------------------NLDVSVTKALQHRSHYFEGVLKCYLHETLET 114 (152)
T ss_dssp -------------------------------------------------CTTSBGGGGGGTCCHHHHTCSEECTTSBHHH
T ss_pred -------------------------------------------------hhcchHHHHHhhhhcccCCCeEECCCCcHHH
Confidence 0012344444100 157889999999999
Q ss_pred HHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHH
Q psy744 237 ALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAA 272 (405)
Q Consensus 237 a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~ 272 (405)
+++.|.+++.+.+||+|++|+++|+||..|+++.+.
T Consensus 115 a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~l~ 150 (152)
T 2uv4_A 115 IINRLVEAEVHRLVVVDENDVVKGIVSLSDILQALV 150 (152)
T ss_dssp HHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHC
T ss_pred HHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 999999999999999998899999999999998764
No 80
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.61 E-value=3.6e-15 Score=126.47 Aligned_cols=130 Identities=13% Similarity=0.270 Sum_probs=106.1
Q ss_pred hHHHHHHhhhcccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCCCCCC
Q psy744 75 NQIFVKFFKFHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSIT 154 (405)
Q Consensus 75 ~~~~~~~l~~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~~~~ 154 (405)
...+.+.+ ..++.|+|....++++++++.++.+|++.|.++++..+||+|++ ++++|++|..|+++.+....
T Consensus 19 ~~~l~~~l-~~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~------ 90 (149)
T 3k2v_A 19 GGALGRKL-LLRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDD-MNIIGIFTDGDLRRVFDTGV------ 90 (149)
T ss_dssp -CHHHHHT-TSBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTT-CBEEEEEEHHHHHHHHCSSS------
T ss_pred Cchhchhc-ccCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCC-CcEEEEecHHHHHHHHhcCC------
Confidence 33444443 36999999432389999999999999999999999999999987 89999999999996653210
Q ss_pred HHHHhhccHHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCH
Q psy744 155 MEELEEHKLETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSI 234 (405)
Q Consensus 155 ~~~l~~~~i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l 234 (405)
.+...+++++|. +++.++.+++++
T Consensus 91 -----------------------------------------------------~~~~~~v~~~m~---~~~~~v~~~~~l 114 (149)
T 3k2v_A 91 -----------------------------------------------------DMRDASIADVMT---RGGIRIRPGTLA 114 (149)
T ss_dssp -----------------------------------------------------CCTTCBHHHHSE---ESCCEECTTCBH
T ss_pred -----------------------------------------------------CcccCcHHHHcC---CCCeEECCCCCH
Confidence 011346777773 678899999999
Q ss_pred HHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHH
Q psy744 235 IHALRKFLERRVSALPMTDSEGHLVDIFAKFDVIN 269 (405)
Q Consensus 235 ~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~ 269 (405)
.++++.|.+++++.+||+|++ +++|+||..|+++
T Consensus 115 ~~a~~~m~~~~~~~lpVvd~~-~~~Giit~~dil~ 148 (149)
T 3k2v_A 115 VDALNLMQSRHITCVLVADGD-HLLGVVHMHDLLR 148 (149)
T ss_dssp HHHHHHHHHHTCSEEEEEETT-EEEEEEEHHHHTC
T ss_pred HHHHHHHHHcCCCEEEEecCC-EEEEEEEHHHhhc
Confidence 999999999999999999975 9999999999864
No 81
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.60 E-value=4.9e-15 Score=123.22 Aligned_cols=125 Identities=18% Similarity=0.256 Sum_probs=103.8
Q ss_pred ccccccC-CCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHhhccHH
Q psy744 86 KCYDLIP-TSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEEHKLE 164 (405)
Q Consensus 86 ~~~d~~p-~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~~~i~ 164 (405)
++.|+|. ...++++++++.++.+|++.|.++++..+||+| + ++++|++|..|+++.+....
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~-~~~~Givt~~dl~~~~~~~~---------------- 68 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMK-D-EKLVGILTERDFSRKSYLLD---------------- 68 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHGGGSS----------------
T ss_pred eHHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEE-C-CEEEEEEehHHHHHHHHHcC----------------
Confidence 7788883 116789999999999999999999999999999 4 89999999999985332110
Q ss_pred HHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHHHHHHhc
Q psy744 165 TNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRKFLER 244 (405)
Q Consensus 165 ~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~ 244 (405)
......++.++|. +++.++.+++++.++++.|.++
T Consensus 69 ------------------------------------------~~~~~~~v~~~m~---~~~~~v~~~~~l~~~~~~m~~~ 103 (135)
T 2rc3_A 69 ------------------------------------------KPVKDTQVKEIMT---RQVAYVDLNNTNEDCMALITEM 103 (135)
T ss_dssp ------------------------------------------SCGGGSBGGGTSB---CSCCCBCTTCBHHHHHHHHHHH
T ss_pred ------------------------------------------CCcccCCHHHhcc---CCCeEECCCCcHHHHHHHHHHh
Confidence 0012447788883 6889999999999999999999
Q ss_pred CCCEEEEECCCCcEEEEEeHHHHHHHHHhc
Q psy744 245 RVSALPMTDSEGHLVDIFAKFDVINLAAEK 274 (405)
Q Consensus 245 ~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~ 274 (405)
+.+.+||+| +|+++|+||..|+++.+.+.
T Consensus 104 ~~~~lpVvd-~g~~~Giit~~dll~~~~~~ 132 (135)
T 2rc3_A 104 RVRHLPVLD-DGKVIGLLSIGDLVKDAISQ 132 (135)
T ss_dssp TCSEEEEEE-TTEEEEEEEHHHHHHHHHC-
T ss_pred CCCEEEEEe-CCEEEEEEEHHHHHHHHHhc
Confidence 999999999 79999999999999887653
No 82
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.60 E-value=2.5e-15 Score=127.24 Aligned_cols=142 Identities=23% Similarity=0.272 Sum_probs=109.2
Q ss_pred hhcccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHhhcc
Q psy744 83 KFHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEEHK 162 (405)
Q Consensus 83 ~~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~~~ 162 (405)
+..++.|+|....++++++++.++.+|++.|.++++..+||+|++ ++++|++|..|++.++..... ...+..
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-~~~~G~vt~~dl~~~~~~~~~-----~~~~~~-- 74 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDED-WKLVGLVSDYDLLALDSGDST-----WKTFNA-- 74 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHTTCC----C-----CHHHHH--
T ss_pred ceEEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCC-CeEEEEEEHHHHHHhhcccCc-----ccchHH--
Confidence 356889999555589999999999999999999999999999987 899999999999854321100 000000
Q ss_pred HHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHHHHHH
Q psy744 163 LETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRKFL 242 (405)
Q Consensus 163 i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~ 242 (405)
+.... ......++.++|. ++++++.+++++.++++.|.
T Consensus 75 ----------------------------------~~~~~-----~~~~~~~v~~~m~---~~~~~v~~~~~l~~a~~~~~ 112 (152)
T 4gqw_A 75 ----------------------------------VQKLL-----SKTNGKLVGDLMT---PAPLVVEEKTNLEDAAKILL 112 (152)
T ss_dssp ----------------------------------HHTC----------CCBHHHHSE---ESCCCEESSSBHHHHHHHHH
T ss_pred ----------------------------------HHHHH-----HHhccccHHHhcC---CCceEECCCCcHHHHHHHHH
Confidence 00000 0012347788883 67889999999999999999
Q ss_pred hcCCCEEEEECCCCcEEEEEeHHHHHHHHHhc
Q psy744 243 ERRVSALPMTDSEGHLVDIFAKFDVINLAAEK 274 (405)
Q Consensus 243 ~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~ 274 (405)
+++++.+||+|++|+++|+||..|+++.+...
T Consensus 113 ~~~~~~l~Vvd~~g~~~Giit~~dil~~~~~~ 144 (152)
T 4gqw_A 113 ETKYRRLPVVDSDGKLVGIITRGNVVRAALQI 144 (152)
T ss_dssp HSSCCEEEEECTTSBEEEEEEHHHHHHHHHC-
T ss_pred HCCCCEEEEECCCCcEEEEEEHHHHHHHHHhc
Confidence 99999999999999999999999999987654
No 83
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.60 E-value=5.4e-15 Score=127.01 Aligned_cols=132 Identities=16% Similarity=0.249 Sum_probs=108.0
Q ss_pred hcccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHhhccH
Q psy744 84 FHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEEHKL 163 (405)
Q Consensus 84 ~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~~~i 163 (405)
..++.|+| +.+++++.++.++.+|++.|.++++..+||+|++ ++++|++|..|+++.+...+.... .
T Consensus 4 ~~~v~dim--~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~-~~lvGivt~~dl~~~~~~~~~~~~------~---- 70 (160)
T 2o16_A 4 MIKVEDMM--TRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDAN-KKLLGIVSQRDLLAAQESSLQRSA------Q---- 70 (160)
T ss_dssp CCBGGGTS--EESCCCBCTTSBHHHHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHHHHCC--------------
T ss_pred cCcHHHHh--cCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHHHhhcccc------c----
Confidence 45788999 5578999999999999999999999999999976 899999999999987654321000 0
Q ss_pred HHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHHHHHHh
Q psy744 164 ETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRKFLE 243 (405)
Q Consensus 164 ~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~ 243 (405)
........++.++|. +++.++.+++++.+|++.|.+
T Consensus 71 -----------------------------------------~~~~~~~~~v~~im~---~~~~~v~~~~~l~~a~~~m~~ 106 (160)
T 2o16_A 71 -----------------------------------------GDSLAFETPLFEVMH---TDVTSVAPQAGLKESAIYMQK 106 (160)
T ss_dssp ----------------------------------------------CCCBHHHHSC---SCEEEBCTTSBHHHHHHHHHH
T ss_pred -----------------------------------------ccchhcccCHHHHhc---CCCeEECCCCCHHHHHHHHHH
Confidence 000112447888883 789999999999999999999
Q ss_pred cCCCEEEEECCCCcEEEEEeHHHHHHHHHh
Q psy744 244 RRVSALPMTDSEGHLVDIFAKFDVINLAAE 273 (405)
Q Consensus 244 ~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~ 273 (405)
.+.+.+||+|+ |+++|+||..||++.+..
T Consensus 107 ~~~~~lpVvd~-g~lvGiit~~dil~~~~~ 135 (160)
T 2o16_A 107 HKIGCLPVVAK-DVLVGIITDSDFVTIAIN 135 (160)
T ss_dssp TTCSCEEEEET-TEEEEEECHHHHHHHHHH
T ss_pred hCCCEEEEEEC-CEEEEEEEHHHHHHHHHH
Confidence 99999999997 999999999999988764
No 84
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.59 E-value=9.4e-15 Score=121.88 Aligned_cols=127 Identities=19% Similarity=0.236 Sum_probs=107.3
Q ss_pred hhhcccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHhhc
Q psy744 82 FKFHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEEH 161 (405)
Q Consensus 82 l~~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~~ 161 (405)
|...++.|+| +.++++++++.++.+|++.|.++++..+||+|++ ++++|++|..|+++.+...
T Consensus 4 l~~~~v~~im--~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~-------------- 66 (138)
T 2yzi_A 4 DMKAPIKVYM--TKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDD-GNVVGFFTKSDIIRRVIVP-------------- 66 (138)
T ss_dssp CTTSBGGGTC--BCCCCEECTTSBHHHHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHTTTT--------------
T ss_pred hhhhhHHHHh--cCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHHhc--------------
Confidence 4567899999 5689999999999999999999999999999976 8999999999997332110
Q ss_pred cHHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHHHHH
Q psy744 162 KLETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRKF 241 (405)
Q Consensus 162 ~i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m 241 (405)
+ .....++.++| .+++.++.+++++.++++.|
T Consensus 67 --------------------~-------------------------~~~~~~v~~~m---~~~~~~v~~~~~l~~~~~~m 98 (138)
T 2yzi_A 67 --------------------G-------------------------LPYDIPVERIM---TRNLITANVNTPLGEVLRKM 98 (138)
T ss_dssp --------------------C-------------------------CCTTSBGGGTC---BCSCCEEETTSBHHHHHHHH
T ss_pred --------------------C-------------------------CcccCCHHHHh---hCCCeEECCCCcHHHHHHHH
Confidence 0 01134677777 36889999999999999999
Q ss_pred HhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhc
Q psy744 242 LERRVSALPMTDSEGHLVDIFAKFDVINLAAEK 274 (405)
Q Consensus 242 ~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~ 274 (405)
.+++.+++ |+|++|+++|+||..|+++.+...
T Consensus 99 ~~~~~~~l-Vvd~~g~~~Giit~~dil~~~~~~ 130 (138)
T 2yzi_A 99 AEHRIKHI-LIEEEGKIVGIFTLSDLLEASRRR 130 (138)
T ss_dssp HHHTCSEE-EEEETTEEEEEEEHHHHHHHHHCC
T ss_pred HhcCCCEE-EECCCCCEEEEEEHHHHHHHHHHH
Confidence 99999999 999889999999999999987754
No 85
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.59 E-value=2.3e-14 Score=128.52 Aligned_cols=134 Identities=17% Similarity=0.182 Sum_probs=112.8
Q ss_pred ccchhHHHHHHhh--hcccccccCCCCCeEEEeCCccHHHHHHHHHHc---CCceeeeEeCCCCeeeeEEeHHHHHHHHH
Q psy744 71 KDGGNQIFVKFFK--FHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYN---GIRAAPLWDSVHQQYVGMLTITDFIKILQ 145 (405)
Q Consensus 71 ~~~~~~~~~~~l~--~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~---~i~~~PV~d~~~~~~~GilT~~Dil~~l~ 145 (405)
...+.+.+++.++ ..++.++| +.++++++++.++.+|++.|.++ ++..+||+|++ ++++|++|..|++..
T Consensus 38 ~~~e~~~i~~~l~~~~~~v~~iM--~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~-~~lvGivt~~dll~~-- 112 (205)
T 3kxr_A 38 GERQRQRFELYDQYSENEIGRYT--DHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEA-DKYLGTVRRYDIFKH-- 112 (205)
T ss_dssp CHHHHHHHHHHHHSCTTCGGGGC--BCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTT-CBEEEEEEHHHHTTS--
T ss_pred CHHHHHHHHHHhCCCcchHHhhc--cCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCC-CeEEEEEEHHHHHhC--
Confidence 3445555655544 45899999 56899999999999999999998 89999999987 899999999998621
Q ss_pred HhhCCCCCCHHHHhhccHHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCe
Q psy744 146 MYYTSSSITMEELEEHKLETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENV 225 (405)
Q Consensus 146 ~~~~~~~~~~~~l~~~~i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 225 (405)
. ...+++++| .+++
T Consensus 113 ----~-----------------------------------------------------------~~~~v~~im---~~~~ 126 (205)
T 3kxr_A 113 ----E-----------------------------------------------------------PHEPLISLL---SEDS 126 (205)
T ss_dssp ----C-----------------------------------------------------------TTSBGGGGC---CSSC
T ss_pred ----C-----------------------------------------------------------CcchHHHHh---cCCC
Confidence 0 023677888 3788
Q ss_pred eEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhcc
Q psy744 226 ETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKT 275 (405)
Q Consensus 226 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~ 275 (405)
+++++++++.++++.|.+++++.+||+|++|+++|+||..|++..+.+..
T Consensus 127 ~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i~~e~ 176 (205)
T 3kxr_A 127 RALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTLRAATALVREHY 176 (205)
T ss_dssp CCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHHHHHH
T ss_pred eEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999887653
No 86
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.59 E-value=1.5e-15 Score=130.04 Aligned_cols=121 Identities=17% Similarity=0.201 Sum_probs=102.6
Q ss_pred hhhcccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHhhc
Q psy744 82 FKFHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEEH 161 (405)
Q Consensus 82 l~~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~~ 161 (405)
+...++.|+|....++++++++.++.+|++.|.++++..+||+|++.++++|++|..|++..+...
T Consensus 35 l~~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~-------------- 100 (156)
T 3oi8_A 35 FSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFNP-------------- 100 (156)
T ss_dssp HTTCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSSCG--------------
T ss_pred cCCCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHcC--------------
Confidence 456799999954457999999999999999999999999999998634899999999988432110
Q ss_pred cHHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHHHHH
Q psy744 162 KLETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRKF 241 (405)
Q Consensus 162 ~i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m 241 (405)
...+++++| +++.++.+++++.+|++.|
T Consensus 101 ------------------------------------------------~~~~v~~im----~~~~~v~~~~~l~~a~~~m 128 (156)
T 3oi8_A 101 ------------------------------------------------EQFHLKSIL----RPAVFVPEGKSLTALLKEF 128 (156)
T ss_dssp ------------------------------------------------GGCCHHHHC----BCCCEEETTSBHHHHHHHH
T ss_pred ------------------------------------------------CcccHHHHc----CCCEEECCCCCHHHHHHHH
Confidence 133567777 3588999999999999999
Q ss_pred HhcCCCEEEEECCCCcEEEEEeHHHHH
Q psy744 242 LERRVSALPMTDSEGHLVDIFAKFDVI 268 (405)
Q Consensus 242 ~~~~~~~lpVvd~~g~lvGivt~~Dl~ 268 (405)
.+++.+.+||+|++|+++|+||..|++
T Consensus 129 ~~~~~~~~~Vvd~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 129 REQRNHMAIVIDEYGGTSGLVTFEDII 155 (156)
T ss_dssp HHTTCCEEEEECTTSSEEEEEEHHHHC
T ss_pred HhcCCeEEEEECCCCCEEEEEEHHHhc
Confidence 999999999999999999999999985
No 87
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.58 E-value=1.5e-14 Score=121.22 Aligned_cols=129 Identities=13% Similarity=0.169 Sum_probs=100.7
Q ss_pred hccccc---ccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHhh
Q psy744 84 FHKCYD---LIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEE 160 (405)
Q Consensus 84 ~~~~~d---~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~ 160 (405)
..+..+ +| ..++++++++.++.+|++.|.++++..+||+|++ ++++|++|..|+++.+......
T Consensus 7 ~~~v~~~~~~~--~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~---------- 73 (144)
T 2nyc_A 7 KIPIGDLNIIT--QDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDEN-GYLINVYEAYDVLGLIKGGIYN---------- 73 (144)
T ss_dssp GSBGGGSSCCB--CSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHHTC-------------
T ss_pred hcchhhcCCCC--CCCceEECCCCcHHHHHHHHHHcCcceeeEEcCC-CcEEEEEcHHHHHHHhcccccc----------
Confidence 345555 45 4678999999999999999999999999999987 8999999999999765421000
Q ss_pred ccHHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccc---cCCeeEEcCCCCHHHH
Q psy744 161 HKLETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGT---YENVETVAEETSIIHA 237 (405)
Q Consensus 161 ~~i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~---~~~~~~v~~~~~l~~a 237 (405)
....++.++|... ..++.++.+++++.++
T Consensus 74 ------------------------------------------------~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~ 105 (144)
T 2nyc_A 74 ------------------------------------------------DLSLSVGEALMRRSDDFEGVYTCTKNDKLSTI 105 (144)
T ss_dssp -------------------------------------------------CCSBHHHHHHHCC------CEECTTSBHHHH
T ss_pred ------------------------------------------------cCCccHHHHHhcCccccCCCeEECCCCcHHHH
Confidence 0022344444210 0267899999999999
Q ss_pred HHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHh
Q psy744 238 LRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAE 273 (405)
Q Consensus 238 ~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~ 273 (405)
++.|.+++.+.+||+|++|+++|+||..|+++.+..
T Consensus 106 ~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~ 141 (144)
T 2nyc_A 106 MDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYILL 141 (144)
T ss_dssp HHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred HHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHHh
Confidence 999999999999999988999999999999988754
No 88
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.58 E-value=4.2e-15 Score=123.22 Aligned_cols=126 Identities=21% Similarity=0.219 Sum_probs=102.5
Q ss_pred HhhhcccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHH-HHHHhhCCCCCCHHHHh
Q psy744 81 FFKFHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIK-ILQMYYTSSSITMEELE 159 (405)
Q Consensus 81 ~l~~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~-~l~~~~~~~~~~~~~l~ 159 (405)
.++..++.|+| +++++++.++.++.+|++.|.++++..+||+|++ ++++|++|..|++. .+....
T Consensus 4 ~~~~~~v~~im--~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~----------- 69 (133)
T 1y5h_A 4 PFTMTTARDIM--NAGVTCVGEHETLTAAAQYMREHDIGALPICGDD-DRLHGMLTDRDIVIKGLAAGL----------- 69 (133)
T ss_dssp ----CCHHHHS--EETCCCEETTSBHHHHHHHHHHHTCSEEEEECGG-GBEEEEEEHHHHHHTTGGGTC-----------
T ss_pred hhhhcCHHHHh--cCCceEeCCCCCHHHHHHHHHHhCCCeEEEECCC-CeEEEEEeHHHHHHHHHhcCC-----------
Confidence 34556888888 4578999999999999999999999999999876 89999999999983 322110
Q ss_pred hccHHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHHH
Q psy744 160 EHKLETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALR 239 (405)
Q Consensus 160 ~~~i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~ 239 (405)
.....+++++| .+++.++.+++++.++++
T Consensus 70 ------------------------------------------------~~~~~~v~~~m---~~~~~~v~~~~~l~~~~~ 98 (133)
T 1y5h_A 70 ------------------------------------------------DPNTATAGELA---RDSIYYVDANASIQEMLN 98 (133)
T ss_dssp ------------------------------------------------CTTTSBHHHHH---TTCCCCEETTCCHHHHHH
T ss_pred ------------------------------------------------CccccCHHHHh---cCCCEEECCCCCHHHHHH
Confidence 00133667777 367889999999999999
Q ss_pred HHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHH
Q psy744 240 KFLERRVSALPMTDSEGHLVDIFAKFDVINLAA 272 (405)
Q Consensus 240 ~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~ 272 (405)
.|.+++.+++||+|+ |+++|++|..|+++.+.
T Consensus 99 ~m~~~~~~~l~Vvd~-g~~~Giit~~dil~~l~ 130 (133)
T 1y5h_A 99 VMEEHQVRRVPVISE-HRLVGIVTEADIARHLP 130 (133)
T ss_dssp HHHHHTCSEEEEEET-TEEEEEEEHHHHHHTCC
T ss_pred HHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHH
Confidence 999999999999997 99999999999987653
No 89
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.58 E-value=4.2e-14 Score=120.91 Aligned_cols=141 Identities=13% Similarity=0.235 Sum_probs=109.9
Q ss_pred hhhcccccccCCCCCeEEEeCCccHHHHHHHHHHcCCce-eeeEeCCCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHhh
Q psy744 82 FKFHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRA-APLWDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEE 160 (405)
Q Consensus 82 l~~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~-~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~ 160 (405)
+...++.|+| +.+++++++++++.+|++.|.+++++. +||+|++ +++|++|..|+++.+...+.... .
T Consensus 13 ~~~~~v~~im--~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~--~~vGivt~~dl~~~~~~~~~~~~------~- 81 (157)
T 1o50_A 13 MKVKDVCKLI--SLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDN--KLVGMIPVMHLLKVSGFHFFGFI------P- 81 (157)
T ss_dssp CBHHHHTTSS--CCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEETT--EEEEEEEHHHHHHHHHHHHHCCC------C-
T ss_pred hccccHhhcc--cCCCceECCCCCHHHHHHHHHhCCCCccEEEEECC--EEEEEEEHHHHHHHHhhhHHhhh------c-
Confidence 3456888999 668999999999999999999999999 9999985 99999999999987653210000 0
Q ss_pred ccHHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHHHH
Q psy744 161 HKLETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRK 240 (405)
Q Consensus 161 ~~i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~ 240 (405)
..+ . + ... .......++.++|. + ++++.+++++.+|++.
T Consensus 82 -------------------~~~---------~---~-~~~-----~~~~~~~~v~~im~---~-~~~v~~~~~l~~a~~~ 120 (157)
T 1o50_A 82 -------------------KEE---------L---I-RSS-----MKRLIAKNASEIML---D-PVYVHMDTPLEEALKL 120 (157)
T ss_dssp ---------------------------------------C-----CCCCSSCBHHHHCB---C-CCCBCTTSBHHHHHHH
T ss_pred -------------------cHH---------H---H-HHH-----HHHHcCCcHHHHcC---C-CeEECCCCCHHHHHHH
Confidence 000 0 0 000 01123457888883 6 8999999999999999
Q ss_pred HHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhc
Q psy744 241 FLERRVSALPMTDSEGHLVDIFAKFDVINLAAEK 274 (405)
Q Consensus 241 m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~ 274 (405)
|.+++++++||+|++|+++|+||..|+++.+.+.
T Consensus 121 m~~~~~~~lpVvd~~g~~vGiit~~dll~~l~~~ 154 (157)
T 1o50_A 121 MIDNNIQEMPVVDEKGEIVGDLNSLEILLALWKG 154 (157)
T ss_dssp HHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHS
T ss_pred HHHCCCcEEEEEcCCCEEEEEEEHHHHHHHHHHh
Confidence 9999999999999889999999999999987654
No 90
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.57 E-value=7.3e-15 Score=128.13 Aligned_cols=154 Identities=21% Similarity=0.276 Sum_probs=108.8
Q ss_pred cccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHhhccHH
Q psy744 85 HKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEEHKLE 164 (405)
Q Consensus 85 ~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~~~i~ 164 (405)
.++.|+|....+++++.++.++.+|++.|.++++..+||+|++ ++++|++|..|+++.......... ...+.
T Consensus 4 ~~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~--~~~~~----- 75 (180)
T 3sl7_A 4 YTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDN-WTLVGVVSDYDLLALDSISGRSQN--DTNLF----- 75 (180)
T ss_dssp CBHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHTCC---------------------
T ss_pred eeHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCC-CeEEEEEEHHHHHhhhhhccccCC--ccccc-----
Confidence 4778888443478999999999999999999999999999987 899999999999854321100000 00000
Q ss_pred HHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHHHHHHhc
Q psy744 165 TNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRKFLER 244 (405)
Q Consensus 165 ~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~ 244 (405)
+-. .. ......++...+. .....+++++|. ++++++.+++++.+|++.|.++
T Consensus 76 -----------~~~--~~---~~~~~~~~~~~~~---------~~~~~~v~~~m~---~~~~~v~~~~~l~~a~~~m~~~ 127 (180)
T 3sl7_A 76 -----------PDV--DS---TWKTFNELQKLIS---------KTYGKVVGDLMT---PSPLVVRDSTNLEDAARLLLET 127 (180)
T ss_dssp ---------------------CCCSHHHHHHHHH---------TTTTCBHHHHSE---ESCCCEETTSBHHHHHHHHTTS
T ss_pred -----------ccc--cc---hhhhhHHHHHHHh---------ccccccHHHHhC---CCceEeCCCCcHHHHHHHHHHc
Confidence 000 00 0001111111111 012457888883 6788999999999999999999
Q ss_pred CCCEEEEECCCCcEEEEEeHHHHHHHHHhc
Q psy744 245 RVSALPMTDSEGHLVDIFAKFDVINLAAEK 274 (405)
Q Consensus 245 ~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~ 274 (405)
+++++||+|++|+++|+||..|+++.+...
T Consensus 128 ~~~~lpVvd~~g~~vGiit~~dil~~~~~~ 157 (180)
T 3sl7_A 128 KFRRLPVVDADGKLIGILTRGNVVRAALQI 157 (180)
T ss_dssp TTCEEEEECTTCBEEEEEEHHHHHHHHHHH
T ss_pred CCCEEEEECCCCeEEEEEEHHHHHHHHHHH
Confidence 999999999999999999999999987654
No 91
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.56 E-value=1.2e-14 Score=124.02 Aligned_cols=133 Identities=14% Similarity=0.261 Sum_probs=107.7
Q ss_pred hhhcccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHhhc
Q psy744 82 FKFHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEEH 161 (405)
Q Consensus 82 l~~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~~ 161 (405)
+...++.|+|....+++++.++.++.+|++.|.+++++.+||+|++ ++++|++|..|++..+... ...
T Consensus 8 l~~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~---~~~-------- 75 (157)
T 2emq_A 8 FMQMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTS-YKLHGLISMTMMMDAILGL---ERI-------- 75 (157)
T ss_dssp --CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTT-CCEEEEEEHHHHHHHSBCS---SSB--------
T ss_pred HhhCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCC-CCEEEEeeHHHHHHHHhcc---ccc--------
Confidence 4577899999443478999999999999999999999999999986 8999999999998654311 000
Q ss_pred cHHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHHHHH
Q psy744 162 KLETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRKF 241 (405)
Q Consensus 162 ~i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m 241 (405)
........++.++|. +++.++.+++++.++++.|
T Consensus 76 -------------------------------------------~~~~~~~~~v~~~m~---~~~~~v~~~~~l~~a~~~m 109 (157)
T 2emq_A 76 -------------------------------------------EFERLETMKVEEVMN---RNIPRLRLDDSLMKAVGLI 109 (157)
T ss_dssp -------------------------------------------CGGGGGTCBGGGTCB---CCCCEEETTSBHHHHHHHH
T ss_pred -------------------------------------------chHHhcCCcHHHHhC---CCCceecCCCcHHHHHHHH
Confidence 001112447788873 7889999999999999999
Q ss_pred HhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhc
Q psy744 242 LERRVSALPMTDSEGHLVDIFAKFDVINLAAEK 274 (405)
Q Consensus 242 ~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~ 274 (405)
.++++ +||+|++|+++|+||..|+++.+...
T Consensus 110 ~~~~~--l~Vvd~~g~~~Giit~~dil~~~~~~ 140 (157)
T 2emq_A 110 VNHPF--VCVENDDGYFAGIFTRREVLKQLNKQ 140 (157)
T ss_dssp HHSSE--EEEECSSSSEEEEEEHHHHHHHHHHT
T ss_pred hhCCE--EEEEcCCCeEEEEEEHHHHHHHHHHH
Confidence 99887 99999889999999999999988765
No 92
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.56 E-value=1.2e-14 Score=148.46 Aligned_cols=127 Identities=11% Similarity=0.191 Sum_probs=108.7
Q ss_pred ccccccccccccccCCeeEEcCC-CCHHHHHHHHHhcCCCEEEEEC-CCCcEEEEEeHHHHHHHHHhccccchhhhHHHh
Q psy744 209 FLNKTLRDLKIGTYENVETVAEE-TSIIHALRKFLERRVSALPMTD-SEGHLVDIFAKFDVINLAAEKTYTNLDVTLKEA 286 (405)
Q Consensus 209 ~~~~~v~~i~~~~~~~~~~v~~~-~~l~~a~~~m~~~~~~~lpVvd-~~g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~ 286 (405)
+...+++++|. ++++++.++ +++.+++++|.+++++++||+| ++|+++|+||.+||++.+.... .....++.++
T Consensus 381 l~~~~V~diM~---~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~-~~~~~~V~~i 456 (527)
T 3pc3_A 381 WWSLAIAELEL---PAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMN-RQQSDPAIKA 456 (527)
T ss_dssp TTTSBGGGGCC---CCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHC-CCTTSBGGGG
T ss_pred ccCCcHHHhCc---CCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhcc-CcCCCcHHHH
Confidence 44568899994 789999999 9999999999999999999999 7899999999999998877642 2234455555
Q ss_pred hhccccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCC----CcEEEEEeHHHHHHHHHhCC
Q psy744 287 NEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDED----DHVLGVLSLSDILVYLVLKP 347 (405)
Q Consensus 287 ~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~----g~lvGiIt~~DIl~~l~~~~ 347 (405)
|.+++.++++++++.+++++|.++++ +||||++ |+++||||..||++++....
T Consensus 457 ------m~~~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g~lvGIVT~~Dll~~l~~~~ 513 (527)
T 3pc3_A 457 ------LNKRVIRLNESEILGKLARVLEVDPS--VLILGKNPAGKVELKALATKLDVTTFIAAGK 513 (527)
T ss_dssp ------EETTCCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCEEEEEEEEHHHHHHHHHTCC
T ss_pred ------hcCCCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCCeEEEEEEHHHHHHHHHhcc
Confidence 66899999999999999999977665 7999974 99999999999999998654
No 93
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.56 E-value=3.2e-14 Score=124.72 Aligned_cols=155 Identities=17% Similarity=0.172 Sum_probs=112.5
Q ss_pred HHhhhcccccccCCCCC--eEEE--eCCccHHHHHHHHHHcCCceeeeE--eCCCCeeeeEEeHHHHHHHHHHhhCCCCC
Q psy744 80 KFFKFHKCYDLIPTSAK--LVVF--DTQLLVKKAFFALVYNGIRAAPLW--DSVHQQYVGMLTITDFIKILQMYYTSSSI 153 (405)
Q Consensus 80 ~~l~~~~~~d~~p~s~~--vv~v--~~~~~v~~A~~~m~~~~i~~~PV~--d~~~~~~~GilT~~Dil~~l~~~~~~~~~ 153 (405)
.++...++.|+|....+ ++++ +++.++.+|++.|.+++++.+||+ |++ ++++|++|..|+++.+.........
T Consensus 6 ~~~~~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~-~~lvGiit~~dl~~~~~~~~~~~~~ 84 (185)
T 2j9l_A 6 EFAHKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRES-QRLVGFVLRRDLIISIENARKKQDG 84 (185)
T ss_dssp ---CCCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTT-CBEEEEEEHHHHHHHHHHHHTSCSC
T ss_pred hhhccCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCC-CeEEEEEEHHHHHHHHHhhcccCCC
Confidence 46678899999955422 7778 999999999999999999999999 555 8999999999999877643211100
Q ss_pred CHHHHhhccHHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCC
Q psy744 154 TMEELEEHKLETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETS 233 (405)
Q Consensus 154 ~~~~l~~~~i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~ 233 (405)
... ..+...... ............++.++| .+++.++.++++
T Consensus 85 ~~~----------------~~~~~~~~~-------------------~~~~~~~~~~~~~v~~im---~~~~~~v~~~~~ 126 (185)
T 2j9l_A 85 VVS----------------TSIIYFTEH-------------------SPPLPPYTPPTLKLRNIL---DLSPFTVTDLTP 126 (185)
T ss_dssp CCT----------------TCEEECSSS-------------------CCCCCTTCCCCEECGGGE---ESSCCEEETTSB
T ss_pred ccc----------------cceeecccC-------------------CcccccccccCccHHHhh---CcCCeEeCCCCC
Confidence 000 000000000 000000112345788888 378899999999
Q ss_pred HHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhc
Q psy744 234 IIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEK 274 (405)
Q Consensus 234 l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~ 274 (405)
+.+|++.|.+++.+++||+| +|+++|+||..|+++.+.+.
T Consensus 127 l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~dll~~l~~~ 166 (185)
T 2j9l_A 127 MEIVVDIFRKLGLRQCLVTH-NGRLLGIITKKDVLKHIAQM 166 (185)
T ss_dssp HHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHHHHHHHHHHh
Confidence 99999999999999999999 89999999999999988765
No 94
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.55 E-value=1.4e-14 Score=123.70 Aligned_cols=127 Identities=17% Similarity=0.232 Sum_probs=105.8
Q ss_pred cccccccCCC----CCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHhh
Q psy744 85 HKCYDLIPTS----AKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEE 160 (405)
Q Consensus 85 ~~~~d~~p~s----~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~ 160 (405)
.++.|+|... +++++++++.++.+|++.|.++++..+||.| + ++++|++|..|+++.+.....
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~-~-~~~~Givt~~dl~~~~~~~~~----------- 73 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVD-G-DDIAGIVTERDYARKVVLQER----------- 73 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEES-S-SSEEEEEEHHHHHHHSGGGTC-----------
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEee-C-CEEEEEEEHHHHHHHHHhccC-----------
Confidence 3677777433 6789999999999999999999999999965 4 899999999999966542210
Q ss_pred ccHHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHHHH
Q psy744 161 HKLETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRK 240 (405)
Q Consensus 161 ~~i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~ 240 (405)
.....+++++|. +++.++.+++++.++++.
T Consensus 74 -----------------------------------------------~~~~~~v~~~m~---~~~~~v~~~~~l~~~~~~ 103 (157)
T 4fry_A 74 -----------------------------------------------SSKATRVEEIMT---AKVRYVEPSQSTDECMAL 103 (157)
T ss_dssp -----------------------------------------------CSSSCBHHHHSB---SSCCCBCTTSBHHHHHHH
T ss_pred -----------------------------------------------CccccCHHHHcC---CCCcEECCCCcHHHHHHH
Confidence 011346777773 678999999999999999
Q ss_pred HHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhcc
Q psy744 241 FLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKT 275 (405)
Q Consensus 241 m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~ 275 (405)
|.+++++++||+| +|+++|+||..|+++++....
T Consensus 104 m~~~~~~~lpVvd-~g~~~Giit~~dil~~l~~~~ 137 (157)
T 4fry_A 104 MTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIADQ 137 (157)
T ss_dssp HHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTTC
T ss_pred HHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHHHH
Confidence 9999999999999 799999999999999987653
No 95
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.55 E-value=2.7e-14 Score=125.59 Aligned_cols=125 Identities=14% Similarity=0.114 Sum_probs=106.4
Q ss_pred cccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHhhccHH
Q psy744 85 HKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEEHKLE 164 (405)
Q Consensus 85 ~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~~~i~ 164 (405)
.++.|+| .+++++++++.++.+|+++|.++++..+||+|++ ++++|++|..|++..+....
T Consensus 9 ~~v~~im--~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~-g~~vGivt~~dl~~~~~~~~---------------- 69 (184)
T 1pvm_A 9 MRVEKIM--NSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDN-GNDVGLLSERSIIKRFIPRN---------------- 69 (184)
T ss_dssp CBGGGTS--BTTCCEEETTCBHHHHHHHHHHHTCCEEEEECTT-SCEEEEEEHHHHHHHTGGGC----------------
T ss_pred cCHHHhc--CCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHhhcc----------------
Confidence 5788999 5689999999999999999999999999999976 89999999999986543210
Q ss_pred HHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHHHHHHhc
Q psy744 165 TNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRKFLER 244 (405)
Q Consensus 165 ~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~ 244 (405)
......+++++|. +++.++.+++++.+|++.|.++
T Consensus 70 ------------------------------------------~~~~~~~v~~im~---~~~~~v~~~~~l~~a~~~m~~~ 104 (184)
T 1pvm_A 70 ------------------------------------------KKPDEVPIRLVMR---KPIPKVKSDYDVKDVAAYLSEN 104 (184)
T ss_dssp ------------------------------------------CCGGGSBGGGTSB---SSCCEEETTCBHHHHHHHHHHH
T ss_pred ------------------------------------------cCcccCCHHHHhC---CCCcEECCCCCHHHHHHHHHHc
Confidence 0011347788883 6889999999999999999999
Q ss_pred CCCEEEEECCCCcEEEEEeHHHHHHHHHh
Q psy744 245 RVSALPMTDSEGHLVDIFAKFDVINLAAE 273 (405)
Q Consensus 245 ~~~~lpVvd~~g~lvGivt~~Dl~~~~~~ 273 (405)
+.+.+||+|++|+++|+||..|+++++..
T Consensus 105 ~~~~lpVvd~~g~~~Givt~~dll~~~~~ 133 (184)
T 1pvm_A 105 GLERCAVVDDPGRVVGIVTLTDLSRYLSR 133 (184)
T ss_dssp TCSEEEEECTTCCEEEEEEHHHHTTTSCH
T ss_pred CCcEEEEEcCCCeEEEEEEHHHHHHHHHh
Confidence 99999999988999999999999876654
No 96
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.54 E-value=7.6e-14 Score=128.60 Aligned_cols=176 Identities=14% Similarity=0.059 Sum_probs=112.7
Q ss_pred hhcccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCC-CCeeeeEEeHHHHHHHHHHhhCCCCC---C----
Q psy744 83 KFHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSV-HQQYVGMLTITDFIKILQMYYTSSSI---T---- 154 (405)
Q Consensus 83 ~~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~-~~~~~GilT~~Dil~~l~~~~~~~~~---~---- 154 (405)
...++.|+| +++++++.+++++.+|.++|.+++++++||+|+. .++++|+||..||+..+......... .
T Consensus 11 ~~~~v~diM--t~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~~ 88 (250)
T 2d4z_A 11 YNIQVGDIM--VRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRISAYRRQPAAAAEA 88 (250)
T ss_dssp SSCBTTSSS--BSSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHHTTSSSCCCCCCB
T ss_pred CCCChHHhc--CCCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhhhhhhhhhhhhhcc
Confidence 456899999 7789999999999999999999999999999975 26899999999999887644211000 0
Q ss_pred -----------------HH--HHhhccHHHHHHhcC------CCEEE---E--EeCCCC-------------------EE
Q psy744 155 -----------------ME--ELEEHKLETNLIDYK------IHRLP---V--IDEMGN-------------------VL 185 (405)
Q Consensus 155 -----------------~~--~l~~~~i~~~l~~~~------i~~lp---V--vd~~~~-------------------vv 185 (405)
.. .+........-.+.+ ....| . -+.++. ..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (250)
T 2d4z_A 89 DEEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRFE 168 (250)
T ss_dssp CCC---------------------------------------------------------------------------CC
T ss_pred cccccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCcccc
Confidence 00 000000000000000 00000 0 000000 00
Q ss_pred EEEeHHHHHHHHHHhhCCCCCcccccccc--cc-ccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEE
Q psy744 186 YILTHKRILRFLFLYINDLPKPSFLNKTL--RD-LKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIF 262 (405)
Q Consensus 186 gilt~~dIl~~l~~~~~~~~~~~~~~~~v--~~-i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiv 262 (405)
.-++..++..+-.. .+..++ .. +| ...++++.+++++.++..+|...|++++||++ .|+++|||
T Consensus 169 ~~i~~~~~~~~~~~---------~l~~~Vdl~~~~m---d~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~-~GrLVGIV 235 (250)
T 2d4z_A 169 EMLTLEEIYRWEQR---------EKNVVVNFETCRI---DQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS-MGKLVGVV 235 (250)
T ss_dssp SCCBHHHHHHHHHH---------HTTCBCCTTSSCE---ECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEE
T ss_pred cccChhhhhhHHHH---------hcCceeccccccc---cCCCeEECCCCcHHHHHHHHHHhCCeEEEEEE-CCEEEEEE
Confidence 01444554433221 122333 22 34 37889999999999999999999999999998 69999999
Q ss_pred eHHHHHHHHHh
Q psy744 263 AKFDVINLAAE 273 (405)
Q Consensus 263 t~~Dl~~~~~~ 273 (405)
|.+||++++..
T Consensus 236 TrkDl~kai~~ 246 (250)
T 2d4z_A 236 ALAEIQAAIEG 246 (250)
T ss_dssp EHHHHHHHHHC
T ss_pred EHHHHHHHHHH
Confidence 99999998764
No 97
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.53 E-value=7.1e-14 Score=119.89 Aligned_cols=134 Identities=15% Similarity=0.154 Sum_probs=103.4
Q ss_pred hhcccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeC-CCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHhhc
Q psy744 83 KFHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDS-VHQQYVGMLTITDFIKILQMYYTSSSITMEELEEH 161 (405)
Q Consensus 83 ~~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~-~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~~ 161 (405)
...++.|+| +.+++++++++++.+|++.|.+++++++||+|+ +.++++|++|..|++..+....... ..
T Consensus 11 ~~~~v~dim--~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~------~~-- 80 (164)
T 2pfi_A 11 HHVRVEHFM--NHSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSR------AP-- 80 (164)
T ss_dssp CSCBHHHHC--BCCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC---------------
T ss_pred cCCCHHHHc--CCCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhcccc------CC--
Confidence 456888999 557899999999999999999999999999996 2389999999999997664321000 00
Q ss_pred cHHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccc---cCCeeEEcCCCCHHHHH
Q psy744 162 KLETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGT---YENVETVAEETSIIHAL 238 (405)
Q Consensus 162 ~i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~---~~~~~~v~~~~~l~~a~ 238 (405)
....++.++|... ...+.++.+++++.+++
T Consensus 81 -----------------------------------------------~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~ 113 (164)
T 2pfi_A 81 -----------------------------------------------GHQQCLQDILARGCPTEPVTLTLFSETTLHQAQ 113 (164)
T ss_dssp -----------------------------------------------CCCCBHHHHHHTTCCCBCCCCCEETTCBHHHHH
T ss_pred -----------------------------------------------cccchhhhhhcccccccCCceEECCCCcHHHHH
Confidence 0011333333210 01268899999999999
Q ss_pred HHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhc
Q psy744 239 RKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEK 274 (405)
Q Consensus 239 ~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~ 274 (405)
+.|.+++.+++||+| +|+++|+||..|+++++.+.
T Consensus 114 ~~m~~~~~~~lpVvd-~g~l~Giit~~dil~~~~~~ 148 (164)
T 2pfi_A 114 NLFKLLNLQSLFVTS-RGRAVGCVSWVEMKKAISNL 148 (164)
T ss_dssp HHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHHHHH
T ss_pred HHHHHhCCCEEEEEE-CCEEEEEEEHHHHHHHHHhh
Confidence 999999999999999 79999999999999987654
No 98
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.53 E-value=4.3e-14 Score=142.32 Aligned_cols=120 Identities=19% Similarity=0.215 Sum_probs=104.8
Q ss_pred ccccccccccccCCeeEEcCCCCHHHHHHHHHhc-----CCCEEEEECCCCcEEEEEeHHHHHHHHHhccccchhhhHHH
Q psy744 211 NKTLRDLKIGTYENVETVAEETSIIHALRKFLER-----RVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDVTLKE 285 (405)
Q Consensus 211 ~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~-----~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~ 285 (405)
..+++++|. +++++++++.++.++++.|.++ +++++||+|++++++|+++.+|++... .+.++.+
T Consensus 154 ~~~v~~iM~---~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll~~~-------~~~~v~d 223 (473)
T 2zy9_A 154 EDEAGGLMT---PEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVAD-------PRTRVAE 223 (473)
T ss_dssp TTBSTTTCB---SCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHHHSC-------TTSBGGG
T ss_pred CCCHHHhCC---CCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHhcCC-------CCCcHHH
Confidence 457888884 7899999999999999999986 478999999889999999999998631 1334444
Q ss_pred hhhccccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhC
Q psy744 286 ANEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVLK 346 (405)
Q Consensus 286 ~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~~ 346 (405)
+ |.+++.++++++++.++++.|.+++.+.+||||++|+++|+||.+|+++.+..+
T Consensus 224 i------m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvGiIT~~Dil~~i~~e 278 (473)
T 2zy9_A 224 I------MNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEAE 278 (473)
T ss_dssp T------SBSSCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHHH
T ss_pred H------hCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEEEEehHhhHHHHHHH
Confidence 4 667899999999999999999999999999999999999999999999998753
No 99
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.53 E-value=2.2e-14 Score=122.90 Aligned_cols=133 Identities=11% Similarity=0.165 Sum_probs=107.3
Q ss_pred hhhcccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHhhc
Q psy744 82 FKFHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEEH 161 (405)
Q Consensus 82 l~~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~~ 161 (405)
+...++.|+|....++++++++.++.+|++.|.++++..+||+|++ ++++|++|..|++..+.... ...
T Consensus 11 l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~-~~lvGivt~~dl~~~~~~~~---~~~------- 79 (159)
T 1yav_A 11 LLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPS-YRLHGLIGTNMIMNSIFGLE---RIE------- 79 (159)
T ss_dssp CTTCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTT-CBEEEEEEHHHHHHHHBCSS---SBC-------
T ss_pred HhHhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCC-CCEEEEeEHHHHHHHhhhhc---ccc-------
Confidence 3467888898432378999999999999999999999999999987 89999999999986653210 000
Q ss_pred cHHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHHHHH
Q psy744 162 KLETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRKF 241 (405)
Q Consensus 162 ~i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m 241 (405)
.......++.++|. +++.++.+++++.++++.|
T Consensus 80 --------------------------------------------~~~~~~~~v~~~m~---~~~~~v~~~~~l~~a~~~m 112 (159)
T 1yav_A 80 --------------------------------------------FEKLDQITVEEVML---TDIPRLHINDPIMKGFGMV 112 (159)
T ss_dssp --------------------------------------------GGGTTTSBHHHHSB---CSCCEEETTSBHHHHHHHT
T ss_pred --------------------------------------------hhhhccCCHHHhcC---CCCceEcCCCCHHHHHHHH
Confidence 00112446778873 6889999999999999999
Q ss_pred HhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhc
Q psy744 242 LERRVSALPMTDSEGHLVDIFAKFDVINLAAEK 274 (405)
Q Consensus 242 ~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~ 274 (405)
.++++ +||+|++|+++|+||..|+++.+...
T Consensus 113 ~~~~~--lpVvd~~g~~vGiit~~dil~~~~~~ 143 (159)
T 1yav_A 113 INNGF--VCVENDEQVFEGIFTRRVVLKELNKH 143 (159)
T ss_dssp TTCSE--EEEECTTCBEEEEEEHHHHHHHHHHH
T ss_pred HhCCE--EEEEeCCCeEEEEEEHHHHHHHHHHH
Confidence 98876 99999889999999999999987654
No 100
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.49 E-value=6.3e-15 Score=153.59 Aligned_cols=133 Identities=11% Similarity=0.051 Sum_probs=105.2
Q ss_pred cccccccccccccCCeeEEcCCCCHHHHHHHHH-hcCCCEEEEECCCCcEEEEEeHHHHHHHHHhcccc-----------
Q psy744 210 LNKTLRDLKIGTYENVETVAEETSIIHALRKFL-ERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYT----------- 277 (405)
Q Consensus 210 ~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~-~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~~----------- 277 (405)
.+.+++++|... +++.++++++++.|+.+.|. +++++.+||+|++|+++|+|+.+|+++.+......
T Consensus 451 ~~~~V~diM~p~-~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~ 529 (632)
T 3org_A 451 PEMTAREIMHPI-EGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRKEIVDRLQHVLEDVPEPIAGHRTL 529 (632)
T ss_dssp TTSBHHHHCBCT-TTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEESHHHHTTTTTTC--------------
T ss_pred ccCcHHHHhhcC-CCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEEEHHHHHHHHHHHhhhcccccccccce
Confidence 345788998311 68899999999999999999 79999999999999999999999998876443100
Q ss_pred ------chhhhHHHh-----------------------hhccccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCCC
Q psy744 278 ------NLDVTLKEA-----------------------NEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDD 328 (405)
Q Consensus 278 ------~l~~~v~~~-----------------------~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g 328 (405)
.+...+... -.+.+.|.+++.++++++++.++++.|.+++++++||+ |+|
T Consensus 530 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVv-e~G 608 (632)
T 3org_A 530 VLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVT-ERG 608 (632)
T ss_dssp -----------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEE-ETT
T ss_pred eccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEE-ECC
Confidence 000000000 01445788999999999999999999999999999999 689
Q ss_pred cEEEEEeHHHHHHHHH
Q psy744 329 HVLGVLSLSDILVYLV 344 (405)
Q Consensus 329 ~lvGiIt~~DIl~~l~ 344 (405)
+++||||++||++++.
T Consensus 609 ~lvGIVT~~Dll~~~~ 624 (632)
T 3org_A 609 KLVGIVEREDVAYGYS 624 (632)
T ss_dssp EEEEEEEGGGTEECCC
T ss_pred EEEEEEehhhHHHHHh
Confidence 9999999999988765
No 101
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.48 E-value=2e-13 Score=138.38 Aligned_cols=112 Identities=16% Similarity=0.263 Sum_probs=100.8
Q ss_pred cCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECC--CCcEEEEEeHHHHHHHHHhccccchhhhHHHhhhccccCcc-Cce
Q psy744 222 YENVETVAEETSIIHALRKFLERRVSALPMTDS--EGHLVDIFAKFDVINLAAEKTYTNLDVTLKEANEHKTDWFE-GVE 298 (405)
Q Consensus 222 ~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~--~g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~~~~~~~~~-~~~ 298 (405)
..+++++.+++++.+++++|.+++++++||+|+ +++++|+||.+|++. ....+.++.++ |.+ +++
T Consensus 120 ~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~------~~~~~~~V~~v------M~~~~~v 187 (511)
T 3usb_A 120 ISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRF------IQDYSIKISDV------MTKEQLI 187 (511)
T ss_dssp SSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTT------CCCSSSBHHHH------CCCCCCC
T ss_pred ccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhh------hccCCCcHHHh------cccCCCE
Confidence 368899999999999999999999999999998 899999999999964 12335667776 445 889
Q ss_pred EecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHh
Q psy744 299 KCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVL 345 (405)
Q Consensus 299 ~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~ 345 (405)
++++++++.++++.|.+++++.+||||++|+++|+||..||++.+..
T Consensus 188 tv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~ 234 (511)
T 3usb_A 188 TAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEF 234 (511)
T ss_dssp CEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred EECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhc
Confidence 99999999999999999999999999999999999999999999975
No 102
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.47 E-value=2.9e-13 Score=127.59 Aligned_cols=131 Identities=18% Similarity=0.249 Sum_probs=109.3
Q ss_pred chhHHHHHHhh--hcccccccCCCCCeEEEeCCccHHHHHHHHHHc-----CCceeeeEeCCCCeeeeEEeHHHHHHHHH
Q psy744 73 GGNQIFVKFFK--FHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYN-----GIRAAPLWDSVHQQYVGMLTITDFIKILQ 145 (405)
Q Consensus 73 ~~~~~~~~~l~--~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~-----~i~~~PV~d~~~~~~~GilT~~Dil~~l~ 145 (405)
.+...+++.+. ..++.++| +.+++++.++.++.+|++.|.++ ++..+||+|++ ++++|++|..|++..
T Consensus 123 ~e~~~i~~ll~~~~~~v~~iM--~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~-~~lvGivt~~dll~~-- 197 (286)
T 2oux_A 123 EEAGEIKELLHYEDETAGAIM--TTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQE-NHLVGVISLRDLIVN-- 197 (286)
T ss_dssp HHHHHHHHHTTSCTTBHHHHC--BSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTT-CBEEEEEEHHHHTTS--
T ss_pred HHHHHHHHHhcCChHHHHHhC--CCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCC-CeEEEEEEHHHHHcC--
Confidence 34455555543 34788899 56899999999999999999998 78889999987 899999999998731
Q ss_pred HhhCCCCCCHHHHhhccHHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCe
Q psy744 146 MYYTSSSITMEELEEHKLETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENV 225 (405)
Q Consensus 146 ~~~~~~~~~~~~l~~~~i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 225 (405)
. ...+++++| .+++
T Consensus 198 ----~-----------------------------------------------------------~~~~v~~im---~~~~ 211 (286)
T 2oux_A 198 ----D-----------------------------------------------------------DDTLIADIL---NERV 211 (286)
T ss_dssp ----C-----------------------------------------------------------TTSBHHHHS---BSCC
T ss_pred ----C-----------------------------------------------------------CCCcHHHHc---CCCC
Confidence 0 023566777 3678
Q ss_pred eEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhc
Q psy744 226 ETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEK 274 (405)
Q Consensus 226 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~ 274 (405)
+++++++++.++++.|.+++.+++||+|++|+++|+||..|++..+.+.
T Consensus 212 ~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i~~e 260 (286)
T 2oux_A 212 ISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVIDDE 260 (286)
T ss_dssp CCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHH
T ss_pred eeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999987654
No 103
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.43 E-value=1.1e-12 Score=122.95 Aligned_cols=120 Identities=20% Similarity=0.254 Sum_probs=102.6
Q ss_pred hcccccccCCCCCeEEEeCCccHHHHHHHHHHc-----CCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHH
Q psy744 84 FHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYN-----GIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSITMEEL 158 (405)
Q Consensus 84 ~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~-----~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l 158 (405)
..++.++| +.+++++.++.++.+|++.|.++ ++..+||+|.+ ++++|++|..|++.. .
T Consensus 134 ~~~v~~iM--~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~-~~lvGivt~~dll~~------~-------- 196 (278)
T 2yvy_A 134 EDEAGGLM--TPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEK-GRLKGVLSLRDLIVA------D-------- 196 (278)
T ss_dssp TTBGGGTC--BSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTT-CBEEEEEEHHHHHHS------C--------
T ss_pred cchHHhhc--CCCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCC-CCEEEEEEHHHHhcC------C--------
Confidence 45788999 45899999999999999999998 78999999987 899999999998731 0
Q ss_pred hhccHHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHH
Q psy744 159 EEHKLETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHAL 238 (405)
Q Consensus 159 ~~~~i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~ 238 (405)
...+++++| .++++++++++++.+++
T Consensus 197 ---------------------------------------------------~~~~v~~im---~~~~~~v~~~~~l~~a~ 222 (278)
T 2yvy_A 197 ---------------------------------------------------PRTRVAEIM---NPKVVYVRTDTDQEEVA 222 (278)
T ss_dssp ---------------------------------------------------TTCBSTTTS---BSSCCCEETTSBHHHHH
T ss_pred ---------------------------------------------------CCCcHHHHh---CCCCeEEeCCCCHHHHH
Confidence 023677777 37889999999999999
Q ss_pred HHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhc
Q psy744 239 RKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEK 274 (405)
Q Consensus 239 ~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~ 274 (405)
+.|.+++.+.+||+|++|+++|+||..|++..+.+.
T Consensus 223 ~~m~~~~~~~lpVvd~~g~lvGivT~~Dil~~i~~e 258 (278)
T 2yvy_A 223 RLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEAE 258 (278)
T ss_dssp HHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHC---
T ss_pred HHHHhcCCCEEEEEeCCCeEEEEEEHHHHHHHHHHH
Confidence 999999999999999999999999999999887654
No 104
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.39 E-value=1.6e-13 Score=138.59 Aligned_cols=117 Identities=18% Similarity=0.216 Sum_probs=87.8
Q ss_pred ccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhccccchhhhHHHhhhcccc
Q psy744 213 TLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDVTLKEANEHKTD 292 (405)
Q Consensus 213 ~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~~~~~~ 292 (405)
..+++|. .+++++.+++++.+++++|.+++++++||+|++++++|+||.+|++.. ...+.++.++
T Consensus 90 ~~~~~m~---~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~~------~~~~~~v~di------ 154 (496)
T 4fxs_A 90 IFEAGVV---THPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVRFV------TDLTKSVAAV------ 154 (496)
T ss_dssp HCCC--C---BCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHTTC------CCTTSBGGGT------
T ss_pred ccccccc---cCceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHhhc------ccCCCcHHHH------
Confidence 4455663 788999999999999999999999999999999999999999999621 1234445554
Q ss_pred Cc-c-CceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHH
Q psy744 293 WF-E-GVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLV 344 (405)
Q Consensus 293 ~~-~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~ 344 (405)
|. . +++++++++++.++++.|.+++++.+||||++|+++|+||..||++...
T Consensus 155 M~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~~~ 208 (496)
T 4fxs_A 155 MTPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKAES 208 (496)
T ss_dssp SEEGGGCCEEECC----CGGGTCC---CCCEEEECTTSBCCEEECCC-----CC
T ss_pred hcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHhhc
Confidence 54 2 5899999999999999999999999999999999999999999999864
No 105
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.39 E-value=1.5e-12 Score=132.00 Aligned_cols=117 Identities=16% Similarity=0.244 Sum_probs=101.7
Q ss_pred cccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEEC--CCCcEEEEEeHHHHHHHHHhccccchhhhHHHhhhccc
Q psy744 214 LRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTD--SEGHLVDIFAKFDVINLAAEKTYTNLDVTLKEANEHKT 291 (405)
Q Consensus 214 v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd--~~g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~~~~~ 291 (405)
++++|. .+++++.+++++.++++.|.+++++.+||+| ++++++|+||.+|++... ..+.++.+
T Consensus 92 ~~~im~---~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~~------~~~~~v~~------ 156 (491)
T 1zfj_A 92 SENGVI---IDPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFIS------DYNAPISE------ 156 (491)
T ss_dssp HTTTTS---SSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHCS------CSSSBTTT------
T ss_pred HHhcCc---CCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhhc------cCCCcHHH------
Confidence 456663 6889999999999999999999999999999 789999999999998541 12333444
Q ss_pred cCcc-CceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHh
Q psy744 292 DWFE-GVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVL 345 (405)
Q Consensus 292 ~~~~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~ 345 (405)
.|.+ +++++++++++.++++.|.+++++.+||||++|+++|+||..||++.+..
T Consensus 157 im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~~ 211 (491)
T 1zfj_A 157 HMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEF 211 (491)
T ss_dssp SCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred HcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHhc
Confidence 4666 88999999999999999999999999999999999999999999999874
No 106
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.37 E-value=1.6e-12 Score=132.73 Aligned_cols=126 Identities=13% Similarity=0.053 Sum_probs=106.5
Q ss_pred hhhcccccccCCCCCeEEEeCC-ccHHHHHHHHHHcCCceeeeEe-CCCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHh
Q psy744 82 FKFHKCYDLIPTSAKLVVFDTQ-LLVKKAFFALVYNGIRAAPLWD-SVHQQYVGMLTITDFIKILQMYYTSSSITMEELE 159 (405)
Q Consensus 82 l~~~~~~d~~p~s~~vv~v~~~-~~v~~A~~~m~~~~i~~~PV~d-~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~ 159 (405)
+...++.|+| ++++++++++ +++.+|+++|.+++++.+||+| ++ ++++|+||..|+++.+.....
T Consensus 381 l~~~~V~diM--~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~-g~lvGiVt~~Dll~~l~~~~~---------- 447 (527)
T 3pc3_A 381 WWSLAIAELE--LPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDD-GSVLGVVGQETLITQIVSMNR---------- 447 (527)
T ss_dssp TTTSBGGGGC--CCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTT-CCEEEEEEHHHHHHHHHHHCC----------
T ss_pred ccCCcHHHhC--cCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCC-CEEEEEEEHHHHHHHHHhccC----------
Confidence 4467899999 6789999999 9999999999999999999999 44 899999999999977653210
Q ss_pred hccHHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHHH
Q psy744 160 EHKLETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALR 239 (405)
Q Consensus 160 ~~~i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~ 239 (405)
....+++++| .++++++.+++++.++++
T Consensus 448 -------------------------------------------------~~~~~V~~im---~~~~~~v~~~~~l~~a~~ 475 (527)
T 3pc3_A 448 -------------------------------------------------QQSDPAIKAL---NKRVIRLNESEILGKLAR 475 (527)
T ss_dssp -------------------------------------------------CTTSBGGGGE---ETTCCEEETTSBHHHHHH
T ss_pred -------------------------------------------------cCCCcHHHHh---cCCCeEECCCCcHHHHHH
Confidence 0134778888 478999999999999999
Q ss_pred HHHhcCCCEEEEECCC----CcEEEEEeHHHHHHHHHhc
Q psy744 240 KFLERRVSALPMTDSE----GHLVDIFAKFDVINLAAEK 274 (405)
Q Consensus 240 ~m~~~~~~~lpVvd~~----g~lvGivt~~Dl~~~~~~~ 274 (405)
+|.+++ .+||+|++ |+++|+||..||++.+.+.
T Consensus 476 ~m~~~~--~~pVVd~~~~~~g~lvGIVT~~Dll~~l~~~ 512 (527)
T 3pc3_A 476 VLEVDP--SVLILGKNPAGKVELKALATKLDVTTFIAAG 512 (527)
T ss_dssp HHTTCS--EEEEEEECSSSCEEEEEEEEHHHHHHHHHTC
T ss_pred HHhhCC--EEEEEeCCcccCCeEEEEEEHHHHHHHHHhc
Confidence 997665 47999984 8999999999999998765
No 107
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.36 E-value=7.1e-14 Score=141.69 Aligned_cols=115 Identities=15% Similarity=0.110 Sum_probs=0.8
Q ss_pred cCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCC---CcEEEEEeHHHHHHHHHhccccchhhhHHHhhhccccCccC--
Q psy744 222 YENVETVAEETSIIHALRKFLERRVSALPMTDSE---GHLVDIFAKFDVINLAAEKTYTNLDVTLKEANEHKTDWFEG-- 296 (405)
Q Consensus 222 ~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~---g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~~~~~~~~~~-- 296 (405)
.++++++.+++++.++++.|.+++++++||+|++ ++++|+||.+|++.. . ...+.++.++ |.++
T Consensus 104 ~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~--~---~~~~~~V~di------M~~~~~ 172 (503)
T 1me8_A 104 VVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPID--L---TQTETKVSDM------MTPFSK 172 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHhh--h---ccccCcHHHH------hCCCCC
Confidence 3688999999999999999999999999999987 899999999999864 1 1234455555 5555
Q ss_pred ceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhCC
Q psy744 297 VEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVLKP 347 (405)
Q Consensus 297 ~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~~~ 347 (405)
++++++++++.+++++|.+++++.+||||++|+++|+||.+||++.+....
T Consensus 173 ~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~~~ 223 (503)
T 1me8_A 173 LVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVCHN 223 (503)
T ss_dssp -------------------------------------------------CC
T ss_pred CEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhhccc
Confidence 899999999999999999999999999999999999999999999987443
No 108
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.34 E-value=1.3e-13 Score=139.79 Aligned_cols=119 Identities=21% Similarity=0.306 Sum_probs=7.1
Q ss_pred ccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhccccchhhhHHHhhhcccc
Q psy744 213 TLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDVTLKEANEHKTD 292 (405)
Q Consensus 213 ~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~~~~~~ 292 (405)
.+.++| .++++++.+++++.++++.|.+++++.+||+|++++++|+||.+|+++.. ..+.++.++
T Consensus 96 ~~~~iM---~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~~~~------~~~~~v~~i------ 160 (494)
T 1vrd_A 96 KTENGI---IYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVRFEK------NLSKKIKDL------ 160 (494)
T ss_dssp TC------------------------------------------------------------------------------
T ss_pred hHhhcC---ccCCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHHhhc------CCCCcHHHH------
Confidence 345666 37889999999999999999999999999999889999999999998631 123455554
Q ss_pred Ccc--CceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhC
Q psy744 293 WFE--GVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVLK 346 (405)
Q Consensus 293 ~~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~~ 346 (405)
|.+ ++.++++++++.+++++|.+++++.+||||++|+++|+||..||++.+...
T Consensus 161 m~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~~~ 216 (494)
T 1vrd_A 161 MTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIEHP 216 (494)
T ss_dssp ------------------------------------------------CHHHHTCT
T ss_pred hCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhccc
Confidence 555 889999999999999999999999999999999999999999999998643
No 109
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.33 E-value=1e-11 Score=124.89 Aligned_cols=129 Identities=19% Similarity=0.230 Sum_probs=107.4
Q ss_pred hHHHHHHhh--hcccccccCCCCCeEEEeCCccHHHHHHHHHHc-----CCceeeeEeCCCCeeeeEEeHHHHHHHHHHh
Q psy744 75 NQIFVKFFK--FHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYN-----GIRAAPLWDSVHQQYVGMLTITDFIKILQMY 147 (405)
Q Consensus 75 ~~~~~~~l~--~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~-----~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~ 147 (405)
.+.+++.++ ..++.++| +.++++++++.++.+|++.|.++ ++..+||+|++ ++++|++|..|++..
T Consensus 143 ~~~i~~~l~~~~~~v~~iM--~~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~-~~lvGiVt~~Dll~~---- 215 (473)
T 2zy9_A 143 RAEVEALARYEEDEAGGLM--TPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEK-GRLKGVLSLRDLIVA---- 215 (473)
T ss_dssp HHHHHHHHTSCTTBSTTTC--BSCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTT-SBEEEEEEHHHHHHS----
T ss_pred HHHHHHHhcCCCCCHHHhC--CCCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCC-CcEEEEEEHHHHhcC----
Confidence 333444443 34777888 55899999999999999999997 58899999987 899999999998731
Q ss_pred hCCCCCCHHHHhhccHHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeE
Q psy744 148 YTSSSITMEELEEHKLETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVET 227 (405)
Q Consensus 148 ~~~~~~~~~~l~~~~i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~ 227 (405)
. .+.+++++| .+++++
T Consensus 216 --~-----------------------------------------------------------~~~~v~dim---~~~~~~ 231 (473)
T 2zy9_A 216 --D-----------------------------------------------------------PRTRVAEIM---NPKVVY 231 (473)
T ss_dssp --C-----------------------------------------------------------TTSBGGGTS---BSSCCC
T ss_pred --C-----------------------------------------------------------CCCcHHHHh---CCCCeE
Confidence 0 033677888 378999
Q ss_pred EcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhc
Q psy744 228 VAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEK 274 (405)
Q Consensus 228 v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~ 274 (405)
+++++++.++++.|.+++...+||+|++|+++|+||.+|+++.+.+.
T Consensus 232 v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvGiIT~~Dil~~i~~e 278 (473)
T 2zy9_A 232 VRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEAE 278 (473)
T ss_dssp EESSSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHHH
T ss_pred EeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEEEEehHhhHHHHHHH
Confidence 99999999999999999999999999999999999999999887654
No 110
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.31 E-value=1.6e-13 Score=138.35 Aligned_cols=117 Identities=21% Similarity=0.235 Sum_probs=2.6
Q ss_pred ccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhccccchhhhHHHhhhcccc
Q psy744 213 TLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDVTLKEANEHKTD 292 (405)
Q Consensus 213 ~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~~~~~~ 292 (405)
.++++|. .+++++.+++++.+++++|.+++++++||+| +++++|+||.+|+.... ..+.++.++
T Consensus 89 ~~~~~m~---~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd-~g~lvGIVt~rDl~~~~------~~~~~V~~v------ 152 (490)
T 4avf_A 89 KHETAIV---RDPVTVTPSTKIIELLQMAREYGFSGFPVVE-QGELVGIVTGRDLRVKP------NAGDTVAAI------ 152 (490)
T ss_dssp HCCC----------------------------------------------------------------------------
T ss_pred ccccCcc---cCceEeCCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEhHHhhhcc------ccCCcHHHH------
Confidence 4566663 7889999999999999999999999999999 89999999999996321 224455555
Q ss_pred Cc-c-CceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHh
Q psy744 293 WF-E-GVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVL 345 (405)
Q Consensus 293 ~~-~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~ 345 (405)
|. + +++++++++++.+++++|.+++++.+||||++|+++|+||+.||++....
T Consensus 153 Mtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~ 207 (490)
T 4avf_A 153 MTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKTY 207 (490)
T ss_dssp ------------------------------------------------------C
T ss_pred hccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhccC
Confidence 54 3 68999999999999999999999999999999999999999999998753
No 111
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.31 E-value=5.4e-13 Score=135.24 Aligned_cols=165 Identities=14% Similarity=0.083 Sum_probs=25.5
Q ss_pred HHhhhcccccc-cCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCC--CCeeeeEEeHHHHHHHHHHhhCCCCCCHH
Q psy744 80 KFFKFHKCYDL-IPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSV--HQQYVGMLTITDFIKILQMYYTSSSITME 156 (405)
Q Consensus 80 ~~l~~~~~~d~-~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~--~~~~~GilT~~Dil~~l~~~~~~~~~~~~ 156 (405)
+++...+.+++ | ..++++++++.++.+|+++|.++++..+||+|++ .++++|+||..|+... .
T Consensus 91 ~~v~~V~~~e~gM--~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~-~----------- 156 (503)
T 1me8_A 91 AMVHAVKNFKAGF--VVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPID-L----------- 156 (503)
T ss_dssp HHHHHHHTTTC---------------------------------------------------------------------
T ss_pred HHHhhhhhcccCc--ccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHhh-h-----------
Confidence 34445566676 7 4589999999999999999999999999999974 2689999999998732 0
Q ss_pred HHhhccHHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCC--eeEEcCCCCH
Q psy744 157 ELEEHKLETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYEN--VETVAEETSI 234 (405)
Q Consensus 157 ~l~~~~i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~--~~~v~~~~~l 234 (405)
. ....+++++|. ++ ++++++++++
T Consensus 157 --~-------------------------------------------------~~~~~V~diM~---~~~~~~tv~~~~sl 182 (503)
T 1me8_A 157 --T-------------------------------------------------QTETKVSDMMT---PFSKLVTAHQDTKL 182 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --c-------------------------------------------------cccCcHHHHhC---CCCCCEEEcCCCcH
Confidence 0 01235667773 44 8999999999
Q ss_pred HHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhccccchhhhHHHhhhccccCccCceEecCCCCHHHHHHHHH
Q psy744 235 IHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDVTLKEANEHKTDWFEGVEKCLLDETLFTVMERIV 314 (405)
Q Consensus 235 ~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~ 314 (405)
.+++++|.+++++.+||+|++|+++|+||.+||++........ ..... ..+ ....+.. ....+.++.|.
T Consensus 183 ~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~~~~~--~d~~~------~l~--v~a~v~~-~~~~e~~~~l~ 251 (503)
T 1me8_A 183 SEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVCHNEL--VDSQK------RYL--VGAGINT-RDFRERVPALV 251 (503)
T ss_dssp ---------------------------------------CCCC--BCTTS------CBC--CEEEECS-SSHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhhcccch--hcccc------ccc--cccccCc-hhHHHHHHHHH
Confidence 9999999999999999999999999999999999887644210 00000 001 1123444 66667788888
Q ss_pred HcCCCEEEE
Q psy744 315 RAEVHRLVV 323 (405)
Q Consensus 315 ~~~~~~lpV 323 (405)
+.+++.+.|
T Consensus 252 e~gv~~l~V 260 (503)
T 1me8_A 252 EAGADVLCI 260 (503)
T ss_dssp HHTCSEEEE
T ss_pred hhhccceEE
Confidence 989987665
No 112
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.30 E-value=1.6e-13 Score=135.84 Aligned_cols=110 Identities=16% Similarity=0.190 Sum_probs=0.0
Q ss_pred cCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECC---CCcEEEEEeHHHHHHHHHhccccchhhhHHHhhhccccCccCce
Q psy744 222 YENVETVAEETSIIHALRKFLERRVSALPMTDS---EGHLVDIFAKFDVINLAAEKTYTNLDVTLKEANEHKTDWFEGVE 298 (405)
Q Consensus 222 ~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~---~g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~ 298 (405)
..+++++.|+.++.+++++|.+++++.+||+|+ +++++||||.+|+... +.+.++.++ |+++++
T Consensus 145 i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~-------d~~~~V~ev------MT~~lv 211 (556)
T 4af0_A 145 ITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ-------DAETPIKSV------MTTEVV 211 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc-------ccceEhhhh------cccceE
Confidence 378999999999999999999999999999986 5899999999998542 234556665 667899
Q ss_pred EecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHH
Q psy744 299 KCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLV 344 (405)
Q Consensus 299 ~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~ 344 (405)
+++++.++.+|.++|.++++..|||||++|+|+|+||..||++.-.
T Consensus 212 t~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~~ 257 (556)
T 4af0_A 212 TGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQN 257 (556)
T ss_dssp ----------------------------------------------
T ss_pred EecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhhhh
Confidence 9999999999999999999999999999999999999999998664
No 113
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.30 E-value=4.6e-11 Score=120.98 Aligned_cols=160 Identities=15% Similarity=0.174 Sum_probs=121.1
Q ss_pred cccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeC--CCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHhhccHH
Q psy744 87 CYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDS--VHQQYVGMLTITDFIKILQMYYTSSSITMEELEEHKLE 164 (405)
Q Consensus 87 ~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~--~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~~~i~ 164 (405)
..+.| ..++++++++.++.+|+++|.++++..+||+|+ + ++++|+||..|+.. ...
T Consensus 115 ~~~~m--~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~-~~lvGiVt~rDl~~-----~~~-------------- 172 (511)
T 3usb_A 115 SESGV--ISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDE-RKLVGIITNRDMRF-----IQD-------------- 172 (511)
T ss_dssp SSSCS--SSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTT-CBEEEEEEHHHHTT-----CCC--------------
T ss_pred ccccc--ccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCC-CEEEEEEEehHhhh-----hcc--------------
Confidence 44555 457889999999999999999999999999997 5 89999999999862 000
Q ss_pred HHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccC-CeeEEcCCCCHHHHHHHHHh
Q psy744 165 TNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYE-NVETVAEETSIIHALRKFLE 243 (405)
Q Consensus 165 ~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~-~~~~v~~~~~l~~a~~~m~~ 243 (405)
...+++++|. + ++++++++.++.++++.|.+
T Consensus 173 ---------------------------------------------~~~~V~~vM~---~~~~vtv~~~~~l~eal~~m~~ 204 (511)
T 3usb_A 173 ---------------------------------------------YSIKISDVMT---KEQLITAPVGTTLSEAEKILQK 204 (511)
T ss_dssp ---------------------------------------------SSSBHHHHCC---CCCCCCEETTCCHHHHHHHHHH
T ss_pred ---------------------------------------------CCCcHHHhcc---cCCCEEECCCCCHHHHHHHHHH
Confidence 1346777773 4 88999999999999999999
Q ss_pred cCCCEEEEECCCCcEEEEEeHHHHHHHHHhccccchhhhHHHhhhccccCccCc--eEecCCCCHHHHHHHHHHcCCCEE
Q psy744 244 RRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDVTLKEANEHKTDWFEGV--EKCLLDETLFTVMERIVRAEVHRL 321 (405)
Q Consensus 244 ~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~--~~v~~~~~l~~a~~~m~~~~~~~l 321 (405)
++++.+||+|++|+++|+||.+|+++........ . +.+.+.. ..+.......+.++.+.+.++..+
T Consensus 205 ~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~p~a~------~------D~~~rl~V~aavg~~~d~~era~aLveaGvd~I 272 (511)
T 3usb_A 205 YKIEKLPLVDNNGVLQGLITIKDIEKVIEFPNSA------K------DKQGRLLVGAAVGVTADAMTRIDALVKASVDAI 272 (511)
T ss_dssp HTCSEEEEECTTSBEEEEEEHHHHHHHHHCTTCC------B------CTTSCBCCEEEECSSTTHHHHHHHHHHTTCSEE
T ss_pred cCCCEEEEEeCCCCEeeeccHHHHHHhhhcccch------h------hhccceeeeeeeeeccchHHHHHHHHhhccceE
Confidence 9999999999999999999999999987653100 0 0011111 233444445666777888888877
Q ss_pred EEEcCCC
Q psy744 322 VVVDEDD 328 (405)
Q Consensus 322 pVvd~~g 328 (405)
.|-..++
T Consensus 273 ~Id~a~g 279 (511)
T 3usb_A 273 VLDTAHG 279 (511)
T ss_dssp EEECSCT
T ss_pred Eeccccc
Confidence 7754443
No 114
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.29 E-value=3.5e-12 Score=132.85 Aligned_cols=172 Identities=12% Similarity=-0.018 Sum_probs=105.5
Q ss_pred hhcccccccCCCCCeEEEeCCccHHHHHHHHH-HcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHhhc
Q psy744 83 KFHKCYDLIPTSAKLVVFDTQLLVKKAFFALV-YNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEEH 161 (405)
Q Consensus 83 ~~~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~-~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~~ 161 (405)
...++.|+|...++++++++++++.++.+.|. +++++++||+|++ ++++|++|..|+.+.+.................
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~-~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~ 529 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDAN-GYLLGAISRKEIVDRLQHVLEDVPEPIAGHRTL 529 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTT-CBBCCEESHHHHTTTTTTC--------------
T ss_pred ccCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecC-CeEEEEEEHHHHHHHHHHHhhhcccccccccce
Confidence 56789999954478999999999999999999 7999999999986 899999999999976543211110000000000
Q ss_pred c-HHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHHHH
Q psy744 162 K-LETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRK 240 (405)
Q Consensus 162 ~-i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~ 240 (405)
. .........++.+.-. ......+..+.++.... ....+++++| .++++++++++++.++++.
T Consensus 530 ~~~~~~~l~~~~~~~~~~-~~~~~~~~~~e~~~~~~------------~~~~~v~~iM---t~~pitV~~~~~l~ea~~~ 593 (632)
T 3org_A 530 VLLDAADLSENIEGLVDE-TPSGEHSSKGKRTATVL------------EPTSSLVVPC---DVSPIVVTSYSLVRQLHFL 593 (632)
T ss_dssp ------------------------------------------------------CCSC---CCCCCEEETTCBHHHHHHH
T ss_pred eccCHHHHHhhcccCCCC-CcccchhhhcccceEee------------ccccccchhh---cCCCceecCCCcHHHHHHH
Confidence 0 0000000000000000 00000000000000000 0112477888 4889999999999999999
Q ss_pred HHhcCCCEEEEECCCCcEEEEEeHHHHHHHHH
Q psy744 241 FLERRVSALPMTDSEGHLVDIFAKFDVINLAA 272 (405)
Q Consensus 241 m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~ 272 (405)
|.+++++++||+ ++|+++|+||.+|+++...
T Consensus 594 M~~~~i~~lpVv-e~G~lvGIVT~~Dll~~~~ 624 (632)
T 3org_A 594 FVMLMPSMIYVT-ERGKLVGIVEREDVAYGYS 624 (632)
T ss_dssp HHHTCCSEEEEE-ETTEEEEEEEGGGTEECCC
T ss_pred HHhcCCCEEEEE-ECCEEEEEEehhhHHHHHh
Confidence 999999999999 6899999999999976543
No 115
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.21 E-value=2.5e-13 Score=138.27 Aligned_cols=132 Identities=17% Similarity=0.164 Sum_probs=77.8
Q ss_pred eHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECC---CCcEEEEEeHH
Q psy744 189 THKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDS---EGHLVDIFAKF 265 (405)
Q Consensus 189 t~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~---~g~lvGivt~~ 265 (405)
|+.++..++.. -.++.++|. ++++++.+++++.+++++|.+++++.+||+|+ +++++|+||.+
T Consensus 96 t~e~~~~~v~~-----------v~~~~~im~---~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~ 161 (514)
T 1jcn_A 96 TPEFQANEVRK-----------VKNFEQGFI---TDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSR 161 (514)
T ss_dssp CHHHHHHHHHH-----------HHTCCTTSC---SSCCCCCC-----------------CEESCC--------CCEECTT
T ss_pred CHHHHHHHHHh-----------hhhhhhccc---cCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHH
Confidence 67777766532 125667774 67889999999999999999999999999997 58999999999
Q ss_pred HHHHHHHhccccchhhhHHHhhhccccCcc--CceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHH
Q psy744 266 DVINLAAEKTYTNLDVTLKEANEHKTDWFE--GVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYL 343 (405)
Q Consensus 266 Dl~~~~~~~~~~~l~~~v~~~~~~~~~~~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l 343 (405)
|+...... ....++.++ |.+ ++.++++++++.+++++|.+++.+.+||||++|+++|+||++||++.+
T Consensus 162 Dl~~~~~~----~~~~~v~~v------m~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~ 231 (514)
T 1jcn_A 162 DIDFLAEK----DHTTLLSEV------MTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKNR 231 (514)
T ss_dssp TTC--------------------------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSCC
T ss_pred HHHhhhhc----cCCCCHHHH------hCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHHh
Confidence 99764210 123445554 556 889999999999999999999999999999999999999999999877
Q ss_pred H
Q psy744 344 V 344 (405)
Q Consensus 344 ~ 344 (405)
.
T Consensus 232 ~ 232 (514)
T 1jcn_A 232 D 232 (514)
T ss_dssp C
T ss_pred h
Confidence 5
No 116
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.15 E-value=3.8e-12 Score=128.62 Aligned_cols=107 Identities=22% Similarity=0.329 Sum_probs=0.5
Q ss_pred CCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhccccchhhhHHHhhhccccCccCceEecC
Q psy744 223 ENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDVTLKEANEHKTDWFEGVEKCLL 302 (405)
Q Consensus 223 ~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~~v~~ 302 (405)
.+++++.+++++.++++.|.+++++.+||+|+ ++++|+|+.+|++. . .+.++.++ |.+++.++++
T Consensus 101 ~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~-~~lvGivt~~Dl~~---~-----~~~~v~~i------m~~~~~~v~~ 165 (486)
T 2cu0_A 101 EDVITIAPDETVDFALFLMEKHGIDGLPVVED-EKVVGIITKKDIAA---R-----EGKLVKEL------MTKEVITVPE 165 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCceEECCCCCHHHHHHHHHHcCCcEEEEEEC-CEEEEEEEHHHhcc---C-----CCCCHHHH------ccCCCeEECC
Confidence 68899999999999999999999999999997 99999999999975 1 13344444 5568889999
Q ss_pred CCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHH
Q psy744 303 DETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLV 344 (405)
Q Consensus 303 ~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~ 344 (405)
++++.++++.|.+++++.+||||++|+++|+||.+||++.+.
T Consensus 166 ~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~~~~ 207 (486)
T 2cu0_A 166 SIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVARKK 207 (486)
T ss_dssp -----------------------------------------C
T ss_pred cCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHHhhh
Confidence 999999999999999999999999999999999999999864
No 117
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.14 E-value=1.3e-09 Score=110.33 Aligned_cols=116 Identities=20% Similarity=0.246 Sum_probs=100.9
Q ss_pred ccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEe--CCCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHhhccHHH
Q psy744 88 YDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWD--SVHQQYVGMLTITDFIKILQMYYTSSSITMEELEEHKLET 165 (405)
Q Consensus 88 ~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d--~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~~~i~~ 165 (405)
.|+| ..++++++++.++.+|++.|.++++..+||+| ++ ++++|++|..|++.. ..
T Consensus 93 ~~im--~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~-~~lvGivt~~Dl~~~-----~~--------------- 149 (491)
T 1zfj_A 93 ENGV--IIDPFFLTPEHKVSEAEELMQRYRISGVPIVETLAN-RKLVGIITNRDMRFI-----SD--------------- 149 (491)
T ss_dssp TTTT--SSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTT-CBEEEEEEHHHHHHC-----SC---------------
T ss_pred HhcC--cCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCC-CEEEEEEEHHHHhhh-----cc---------------
Confidence 5777 55889999999999999999999999999999 55 899999999998732 00
Q ss_pred HHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccC-CeeEEcCCCCHHHHHHHHHhc
Q psy744 166 NLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYE-NVETVAEETSIIHALRKFLER 244 (405)
Q Consensus 166 ~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~-~~~~v~~~~~l~~a~~~m~~~ 244 (405)
...+++++|. + +++++++++++.++++.|.++
T Consensus 150 --------------------------------------------~~~~v~~im~---~~~~~~v~~~~~l~~a~~~m~~~ 182 (491)
T 1zfj_A 150 --------------------------------------------YNAPISEHMT---SEHLVTAAVGTDLETAERILHEH 182 (491)
T ss_dssp --------------------------------------------SSSBTTTSCC---CSCCCCEETTCCHHHHHHHHHHT
T ss_pred --------------------------------------------CCCcHHHHcC---CCCCEEECCCCCHHHHHHHHHHc
Confidence 0336777773 4 788999999999999999999
Q ss_pred CCCEEEEECCCCcEEEEEeHHHHHHHHHh
Q psy744 245 RVSALPMTDSEGHLVDIFAKFDVINLAAE 273 (405)
Q Consensus 245 ~~~~lpVvd~~g~lvGivt~~Dl~~~~~~ 273 (405)
+.+.+||+|++|+++|++|..|+++....
T Consensus 183 ~~~~lpVVd~~g~lvGivt~~Dil~~~~~ 211 (491)
T 1zfj_A 183 RIEKLPLVDNSGRLSGLITIKDIEKVIEF 211 (491)
T ss_dssp TCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred CCCEEEEEcCCCcEEEEEEHHHHHHHHhc
Confidence 99999999999999999999999998874
No 118
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.09 E-value=6.7e-11 Score=119.37 Aligned_cols=119 Identities=17% Similarity=0.165 Sum_probs=87.6
Q ss_pred ccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHhhccHHH
Q psy744 86 KCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEEHKLET 165 (405)
Q Consensus 86 ~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~~~i~~ 165 (405)
+..++| ..++++++++.++.+|+++|.++++..+||+|++ ++++|+||..|+.. ..
T Consensus 90 ~~~~~m--~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~-~~lvGiVt~rDL~~------~~--------------- 145 (496)
T 4fxs_A 90 IFEAGV--VTHPVTVRPEQTIADVMELTHYHGFAGFPVVTEN-NELVGIITGRDVRF------VT--------------- 145 (496)
T ss_dssp HCCC----CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSS-SBEEEEEEHHHHTT------CC---------------
T ss_pred cccccc--ccCceEECCCCCHHHHHHHHHHcCCcEEEEEccC-CEEEEEEEHHHHhh------cc---------------
Confidence 446677 4678999999999999999999999999999986 89999999999860 00
Q ss_pred HHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHHHHHHhcC
Q psy744 166 NLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRKFLERR 245 (405)
Q Consensus 166 ~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~ 245 (405)
....++.++|.. ..++++++++.++.+++++|.+++
T Consensus 146 -------------------------------------------~~~~~v~diM~p-~~~~vtv~~~~~l~ea~~~m~~~~ 181 (496)
T 4fxs_A 146 -------------------------------------------DLTKSVAAVMTP-KERLATVKEGATGAEVQEKMHKAR 181 (496)
T ss_dssp -------------------------------------------CTTSBGGGTSEE-GGGCCEEECC----CGGGTCC---
T ss_pred -------------------------------------------cCCCcHHHHhcC-CCCCEEECCCCCHHHHHHHHHHcC
Confidence 013367787720 026899999999999999999999
Q ss_pred CCEEEEECCCCcEEEEEeHHHHHHHHH
Q psy744 246 VSALPMTDSEGHLVDIFAKFDVINLAA 272 (405)
Q Consensus 246 ~~~lpVvd~~g~lvGivt~~Dl~~~~~ 272 (405)
+..+||+|++|+++|+||.+|+++...
T Consensus 182 i~~lpVVDe~G~l~GiIT~~DIl~~~~ 208 (496)
T 4fxs_A 182 VEKILVVNDEFQLKGMITAKDFHKAES 208 (496)
T ss_dssp CCCEEEECTTSBCCEEECCC-----CC
T ss_pred CCEEEEEcCCCCEEEeehHhHHHHhhc
Confidence 999999999999999999999998653
No 119
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.08 E-value=5.8e-11 Score=119.72 Aligned_cols=119 Identities=16% Similarity=0.134 Sum_probs=3.0
Q ss_pred cccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHhhccHH
Q psy744 85 HKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEEHKLE 164 (405)
Q Consensus 85 ~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~~~i~ 164 (405)
.+..++| ..++++++++.++.+|+++|.++++..+||+| + ++++|++|..|+.... .
T Consensus 88 k~~~~~m--~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd-~-g~lvGIVt~rDl~~~~-----~-------------- 144 (490)
T 4avf_A 88 KKHETAI--VRDPVTVTPSTKIIELLQMAREYGFSGFPVVE-Q-GELVGIVTGRDLRVKP-----N-------------- 144 (490)
T ss_dssp HHCCC---------------------------------------------------------------------------
T ss_pred cccccCc--ccCceEeCCCCcHHHHHHHHHHhCCCEEEEEE-C-CEEEEEEEhHHhhhcc-----c--------------
Confidence 3567777 46789999999999999999999999999999 4 8999999999985110 0
Q ss_pred HHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHHHHHHhc
Q psy744 165 TNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRKFLER 244 (405)
Q Consensus 165 ~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~ 244 (405)
...+++++|.. ..+++++++++++.+++++|.++
T Consensus 145 ---------------------------------------------~~~~V~~vMtp-~~~~vtv~~~~~l~ea~~~m~~~ 178 (490)
T 4avf_A 145 ---------------------------------------------AGDTVAAIMTP-KDKLVTAREGTPLEEMKAKLYEN 178 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---------------------------------------------cCCcHHHHhcc-CCCCEEECCCCcHHHHHHHHHHc
Confidence 02356677720 01689999999999999999999
Q ss_pred CCCEEEEECCCCcEEEEEeHHHHHHHHH
Q psy744 245 RVSALPMTDSEGHLVDIFAKFDVINLAA 272 (405)
Q Consensus 245 ~~~~lpVvd~~g~lvGivt~~Dl~~~~~ 272 (405)
+++.+||+|++|+++|+||.+|+++...
T Consensus 179 ~i~~lpVVDe~g~lvGiIT~~Dil~~~~ 206 (490)
T 4avf_A 179 RIEKMLVVDENFYLRGLVTFRDIEKAKT 206 (490)
T ss_dssp ----------------------------
T ss_pred CCCEEEEEcCCCcEEEEEehHHhhhhcc
Confidence 9999999999999999999999998764
No 120
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.08 E-value=5.9e-11 Score=120.26 Aligned_cols=119 Identities=21% Similarity=0.290 Sum_probs=6.8
Q ss_pred ccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHhhccHHH
Q psy744 86 KCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEEHKLET 165 (405)
Q Consensus 86 ~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~~~i~~ 165 (405)
+..|+| ..++++++++.++.+|++.|.++++..+||+|++ ++++|+||..|+... . +
T Consensus 96 ~~~~iM--~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~-~~lvGivt~~Dl~~~-~-----------~-------- 152 (494)
T 1vrd_A 96 KTENGI--IYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEE-GRLVGLLTNRDVRFE-K-----------N-------- 152 (494)
T ss_dssp TC------------------------------------------------------------------------------
T ss_pred hHhhcC--ccCCeEECCCCCHHHHHHHHHHcCceEEEEEcCC-CEEEEEEEHHHHHhh-c-----------C--------
Confidence 456788 5689999999999999999999999999999986 899999999998731 0 0
Q ss_pred HHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccC--CeeEEcCCCCHHHHHHHHHh
Q psy744 166 NLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYE--NVETVAEETSIIHALRKFLE 243 (405)
Q Consensus 166 ~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~--~~~~v~~~~~l~~a~~~m~~ 243 (405)
...++.++|. + +++++.+++++.+++++|.+
T Consensus 153 --------------------------------------------~~~~v~~im~---~~~~~~~v~~~~~l~ea~~~m~~ 185 (494)
T 1vrd_A 153 --------------------------------------------LSKKIKDLMT---PREKLIVAPPDISLEKAKEILHQ 185 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------CCCcHHHHhC---CCCCCeEECCCCCHHHHHHHHHH
Confidence 0225666663 4 78999999999999999999
Q ss_pred cCCCEEEEECCCCcEEEEEeHHHHHHHHHhc
Q psy744 244 RRVSALPMTDSEGHLVDIFAKFDVINLAAEK 274 (405)
Q Consensus 244 ~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~ 274 (405)
+++..+||+|++|+++|+||..|+++.....
T Consensus 186 ~~~~~lpVVd~~g~lvGiIt~~Dll~~~~~~ 216 (494)
T 1vrd_A 186 HRIEKLPLVSKDNKLVGLITIKDIMSVIEHP 216 (494)
T ss_dssp -----------------------CHHHHTCT
T ss_pred cCCcEEEEEcCCCeEEEEEEHHHHHhhhccc
Confidence 9999999999999999999999999987543
No 121
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=99.05 E-value=3e-10 Score=83.18 Aligned_cols=70 Identities=9% Similarity=0.154 Sum_probs=56.2
Q ss_pred CeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhccccchhhhHHHhhhccccCccCceEe
Q psy744 224 NVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDVTLKEANEHKTDWFEGVEKC 300 (405)
Q Consensus 224 ~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~~v 300 (405)
+++++.+++++.+|+++|.+++++++||+| +|+++|++|.+|+++.+.....+..+.+++++ |+++++++
T Consensus 1 k~vtv~p~~tv~ea~~~M~~~~i~~~~V~d-~~~lvGIvT~~Di~~~~~~~~~~~~~~~V~~i------Mt~~~iTV 70 (70)
T 3ghd_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVME-GDEILGVVTERDILDKVVAKGKNPKEVKVEEI------MTKNPVKI 70 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHTTTTTCCGGGCBGGGT------CEECTTCC
T ss_pred CCEEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHhcCCCcccCCHHHh------cCCCCeEC
Confidence 368999999999999999999999999998 58999999999998776554343345556665 66776653
No 122
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=98.97 E-value=6e-11 Score=117.61 Aligned_cols=109 Identities=19% Similarity=0.251 Sum_probs=0.0
Q ss_pred CeEEEeCCccHHHHHHHHHHcCCceeeeEeCC--CCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHhhccHHHHHHhcCCC
Q psy744 96 KLVVFDTQLLVKKAFFALVYNGIRAAPLWDSV--HQQYVGMLTITDFIKILQMYYTSSSITMEELEEHKLETNLIDYKIH 173 (405)
Q Consensus 96 ~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~--~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~~~i~~~l~~~~i~ 173 (405)
+.+++.++.+|.+|+++|.++++..+||+|+. .++++||+|.+|+.- .
T Consensus 147 dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf--~---------------------------- 196 (556)
T 4af0_A 147 DPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQF--Q---------------------------- 196 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEecccccc--c----------------------------
Confidence 46888888888888888888888888888762 257777777777540 0
Q ss_pred EEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEEC
Q psy744 174 RLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTD 253 (405)
Q Consensus 174 ~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 253 (405)
-...+++++| .+++++++.+.++.+|.++|.++++..+||||
T Consensus 197 -----------------------------------d~~~~V~evM---T~~lvt~~~~~~leeA~~iL~~~kieklpVVd 238 (556)
T 4af0_A 197 -----------------------------------DAETPIKSVM---TTEVVTGSSPITLEKANSLLRETKKGKLPIVD 238 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----------------------------------ccceEhhhhc---ccceEEecCCCCHHHHHHHHHHccccceeEEc
Confidence 0134677888 36799999999999999999999999999999
Q ss_pred CCCcEEEEEeHHHHHHHHH
Q psy744 254 SEGHLVDIFAKFDVINLAA 272 (405)
Q Consensus 254 ~~g~lvGivt~~Dl~~~~~ 272 (405)
++|+++|+||.+|+.+...
T Consensus 239 ~~g~LvGlIT~kDi~k~~~ 257 (556)
T 4af0_A 239 SNGHLVSLVARSDLLKNQN 257 (556)
T ss_dssp -------------------
T ss_pred cCCcEEEEEEechhhhhhh
Confidence 9999999999999987553
No 123
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.92 E-value=3.6e-10 Score=114.09 Aligned_cols=163 Identities=23% Similarity=0.329 Sum_probs=22.9
Q ss_pred ccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCCCCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHhhccHHHHH
Q psy744 88 YDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEEHKLETNL 167 (405)
Q Consensus 88 ~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~~~i~~~l 167 (405)
.|.| ..++++++++.++.+|++.|.++++..+||+|+ ++++|++|..|++. . +
T Consensus 96 ~~~m--~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~--~~lvGivt~~Dl~~---~----~---------------- 148 (486)
T 2cu0_A 96 ERLI--VEDVITIAPDETVDFALFLMEKHGIDGLPVVED--EKVVGIITKKDIAA---R----E---------------- 148 (486)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred hhcc--ccCceEECCCCCHHHHHHHHHHcCCcEEEEEEC--CEEEEEEEHHHhcc---C----C----------------
Confidence 4566 468999999999999999999999999999997 79999999999873 0 0
Q ss_pred HhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccCCeeEEcCCCCHHHHHHHHHhcCCC
Q psy744 168 IDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVS 247 (405)
Q Consensus 168 ~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~ 247 (405)
..++.++| .++++++++++++.++++.|.+++++
T Consensus 149 -------------------------------------------~~~v~~im---~~~~~~v~~~~~l~eal~~m~~~~~~ 182 (486)
T 2cu0_A 149 -------------------------------------------GKLVKELM---TKEVITVPESIEVEEALKIMIENRID 182 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------------------------------------CCCHHHHc---cCCCeEECCcCcHHHHHHHHHHcCCC
Confidence 12455566 25788999999999999999999999
Q ss_pred EEEEECCCCcEEEEEeHHHHHHHHHhccccchhhhHHHhhhccccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCC
Q psy744 248 ALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDVTLKEANEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDED 327 (405)
Q Consensus 248 ~lpVvd~~g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~ 327 (405)
.+||+|++|+++|++|.+|+++....... ..+.. ...+.. ..+..++ .+.+..|.+.++..+.|-...
T Consensus 183 ~lpVVde~g~lvGiiT~~Dil~~~~~~~~------~~~~~--g~~~v~--~~~~~~~--~~~a~~l~~~gvd~lvvdta~ 250 (486)
T 2cu0_A 183 RLPVVDERGKLVGLITMSDLVARKKYKNA------VRDEN--GELLVA--AAVSPFD--IKRAIELDKAGVDVIVVDTAH 250 (486)
T ss_dssp ------------------------CCTTC------CBCTT--SCBCCE--EEECTTC--HHHHHHHHHTTCSEEEEECSC
T ss_pred EEEEEecCCeEEEEEEHHHHHHhhhcccc------ccccC--Cceeec--ceechhh--HHHHHHHHHhcCCceEEEecC
Confidence 99999999999999999999987542110 00000 000111 1233333 566778889999876443334
Q ss_pred CcEEEEEe
Q psy744 328 DHVLGVLS 335 (405)
Q Consensus 328 g~lvGiIt 335 (405)
|...++++
T Consensus 251 G~~~~~L~ 258 (486)
T 2cu0_A 251 AHNLKAIK 258 (486)
T ss_dssp CCCHHHHH
T ss_pred CcEeehhh
Confidence 55544443
No 124
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.88 E-value=9.9e-11 Score=119.11 Aligned_cols=121 Identities=16% Similarity=0.183 Sum_probs=70.0
Q ss_pred cccccccCCCCCeEEEeCCccHHHHHHHHHHcCCceeeeEeCC--CCeeeeEEeHHHHHHHHHHhhCCCCCCHHHHhhcc
Q psy744 85 HKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSV--HQQYVGMLTITDFIKILQMYYTSSSITMEELEEHK 162 (405)
Q Consensus 85 ~~~~d~~p~s~~vv~v~~~~~v~~A~~~m~~~~i~~~PV~d~~--~~~~~GilT~~Dil~~l~~~~~~~~~~~~~l~~~~ 162 (405)
.++.|+| ..+++++.++.++.+|+++|.+++++.+||+|+. .++++|++|..|+..... .
T Consensus 108 ~~~~~im--~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~-------------~--- 169 (514)
T 1jcn_A 108 KNFEQGF--ITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAE-------------K--- 169 (514)
T ss_dssp HTCCTTS--CSSCCCCCC-----------------CEESCC--------CCEECTTTTC---------------------
T ss_pred hhhhhcc--ccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhh-------------c---
Confidence 3677888 4578899999999999999999999999999973 389999999998863210 0
Q ss_pred HHHHHHhcCCCEEEEEeCCCCEEEEEeHHHHHHHHHHhhCCCCCccccccccccccccccC--CeeEEcCCCCHHHHHHH
Q psy744 163 LETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYE--NVETVAEETSIIHALRK 240 (405)
Q Consensus 163 i~~~l~~~~i~~lpVvd~~~~vvgilt~~dIl~~l~~~~~~~~~~~~~~~~v~~i~~~~~~--~~~~v~~~~~l~~a~~~ 240 (405)
....++.++|. + +++++.+++++.+++++
T Consensus 170 ----------------------------------------------~~~~~v~~vm~---~~~~~~tv~~~~~l~ea~~~ 200 (514)
T 1jcn_A 170 ----------------------------------------------DHTTLLSEVMT---PRIELVVAPAGVTLKEANEI 200 (514)
T ss_dssp ------------------------------------------------------------CCBCCCCEETTCCSTTTTTH
T ss_pred ----------------------------------------------cCCCCHHHHhC---CCCCCeEECCCCCHHHHHHH
Confidence 00235666763 4 78999999999999999
Q ss_pred HHhcCCCEEEEECCCCcEEEEEeHHHHHHHHH
Q psy744 241 FLERRVSALPMTDSEGHLVDIFAKFDVINLAA 272 (405)
Q Consensus 241 m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~ 272 (405)
|.+++...+||+|++|+++|+||.+|+++.+.
T Consensus 201 m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~ 232 (514)
T 1jcn_A 201 LQRSKKGKLPIVNDCDELVAIIARTDLKKNRD 232 (514)
T ss_dssp HHHHTCSCCCEESSSSCCC----CCCCSSCCC
T ss_pred HHHcCCCcccEECCCCeEEEEEEHHHHHHHhh
Confidence 99999999999999999999999999987653
No 125
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.79 E-value=1.4e-08 Score=74.19 Aligned_cols=48 Identities=27% Similarity=0.322 Sum_probs=44.7
Q ss_pred ceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHh
Q psy744 297 VEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVL 345 (405)
Q Consensus 297 ~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~ 345 (405)
++++++++++.+|+++|.+++++++||+| +|+++||||.+||++.+..
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d-~~~lvGIvT~~Di~~~~~~ 49 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME-GDEILGVVTERDILDKVVA 49 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHTTT
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHh
Confidence 57899999999999999999999999998 6999999999999988764
No 126
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.77 E-value=1.3e-08 Score=73.95 Aligned_cols=62 Identities=8% Similarity=0.198 Sum_probs=51.0
Q ss_pred CeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhccccchhhhHHHh
Q psy744 224 NVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDVTLKEA 286 (405)
Q Consensus 224 ~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~~~l~~~v~~~ 286 (405)
+++++.+++++.+|++.|.+++++++||+|+ |+++|+||.+|+++++........+.++.++
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~~~~~~~~~~~~v~~i 62 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVVAKGKNPKEVKVEEI 62 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTTTTTCCGGGCBGGGT
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHHcCCCcccCCHHHh
Confidence 3678999999999999999999999999997 9999999999999987654322334455554
No 127
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.75 E-value=1.9e-08 Score=92.03 Aligned_cols=174 Identities=17% Similarity=0.208 Sum_probs=106.8
Q ss_pred ccccccccccccCCeeEEcCCCCHHHHHHHHHhcCCCEEEEECCCCcEEEEEeHHHHHHHHHhccccch----hhhHHHh
Q psy744 211 NKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNL----DVTLKEA 286 (405)
Q Consensus 211 ~~~v~~i~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~~~~l----~~~v~~~ 286 (405)
..+++++| .++++++.+++++.+|++.|.+++++++||+|++|+++|++|..|+++.+........ ..++.++
T Consensus 6 ~~~v~~im---~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~v 82 (245)
T 3l2b_A 6 KLKVEDLE---MDKIAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNITATYMDIWDSNILAKSATSLDNI 82 (245)
T ss_dssp CCBGGGSC---CBCCCCBCTTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHHH
T ss_pred cCcHHHhc---CCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHHH
Confidence 45899999 4788999999999999999999999999999999999999999999998765321110 0111111
Q ss_pred hh-----------------------------ccccCccCceEecCCCCHHHHHHHHHHcCCCEEEEEcCC----------
Q psy744 287 NE-----------------------------HKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDED---------- 327 (405)
Q Consensus 287 ~~-----------------------------~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~---------- 327 (405)
.. ..+.+..+.+.+-.+ -.++.+.+.+.++..+++++..
T Consensus 83 ~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgd--r~~~~~~~i~~~~~~liit~~~~~~~~v~~~a 160 (245)
T 3l2b_A 83 LDTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGD--RAEIQAELIELKVSLLIVTGGHTPSKEIIELA 160 (245)
T ss_dssp HHHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECS--CHHHHHHHHHTTCSEEEECTTCCCCHHHHHHH
T ss_pred HHHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECC--CHHHHHHHHHcCCCEEEECCCCCCCHHHHHHH
Confidence 11 001111222222222 3788889999999998887531
Q ss_pred --CcEEEEEeHHHHHHHHHhCCCCCCCCccCCCCCCCCCCCCCCcCCcccccccCCccccccccCccccccccc
Q psy744 328 --DHVLGVLSLSDILVYLVLKPSDDDIGVDETSSDSEVPVDPDLASSDDKVFEENEEPRDYVQNSCWGEVPVSD 399 (405)
Q Consensus 328 --g~lvGiIt~~DIl~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (405)
+.+-.+.|..|.......-.... ..+..|.+ ..+...+....+ .+..+++.+.++..+||+|
T Consensus 161 ~~~~~~~i~t~~d~~~~~~~~~~~~---~v~~im~~---~~~~~~~~~~~~----~~~~~~m~~~~~~~~pVvd 224 (245)
T 3l2b_A 161 KKNNITVITTPHDSFTASRLIVQSL---PVDYVMTK---DNLVAVSTDDLV----EDVKVTMSETRYSNYPVID 224 (245)
T ss_dssp HHHTCEEEECSSCHHHHHHHGGGGS---BHHHHSBC---TTCCCEETTSBH----HHHHHHHHHHCCSEEEEEC
T ss_pred HHcCCeEEEeCCChHHHHHHHhcCC---ceeeEecC---CccEEECCCCcH----HHHHHHHHhcCCceEEEEc
Confidence 23455666666554432211110 00111211 112222222111 2556677899999999998
No 128
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.60 E-value=1.1e-07 Score=68.98 Aligned_cols=48 Identities=27% Similarity=0.316 Sum_probs=45.1
Q ss_pred ceEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHh
Q psy744 297 VEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVL 345 (405)
Q Consensus 297 ~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl~~l~~ 345 (405)
+.++.+++++.+|++.|.+++++.+||+|+ |+++|+||.+||++++..
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~~~ 49 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVVA 49 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTTT
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHH
Confidence 578999999999999999999999999996 999999999999999864
No 129
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=58.97 E-value=21 Score=25.65 Aligned_cols=30 Identities=20% Similarity=0.403 Sum_probs=25.3
Q ss_pred CCEEEEECCCCcEEEEEeHHHHHHHHHhcc
Q psy744 246 VSALPMTDSEGHLVDIFAKFDVINLAAEKT 275 (405)
Q Consensus 246 ~~~lpVvd~~g~lvGivt~~Dl~~~~~~~~ 275 (405)
...+-++|++|..+|+++..+.++...+..
T Consensus 13 ~~eVrli~~~Ge~lGv~~~~eAl~~A~e~~ 42 (78)
T 1tif_A 13 AREVRLIDQNGDQLGIKSKQEALEIAARRN 42 (78)
T ss_dssp CSEEEEECTTSCEEEEEEHHHHHHHHHHTT
T ss_pred CCEEEEECCCCcCCCcccHHHHHHHHHHcC
Confidence 455779999999999999999998877664
No 130
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=50.79 E-value=24 Score=25.42 Aligned_cols=28 Identities=18% Similarity=0.303 Sum_probs=23.8
Q ss_pred CCEEEEEcCCCcEEEEEeHHHHHHHHHh
Q psy744 318 VHRLVVVDEDDHVLGVLSLSDILVYLVL 345 (405)
Q Consensus 318 ~~~lpVvd~~g~lvGiIt~~DIl~~l~~ 345 (405)
...+=++|++|..+|+++..+.++....
T Consensus 13 ~~eVrli~~~Ge~lGv~~~~eAl~~A~e 40 (78)
T 1tif_A 13 AREVRLIDQNGDQLGIKSKQEALEIAAR 40 (78)
T ss_dssp CSEEEEECTTSCEEEEEEHHHHHHHHHH
T ss_pred CCEEEEECCCCcCCCcccHHHHHHHHHH
Confidence 4567789999999999999999987753
No 131
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=31.76 E-value=16 Score=30.13 Aligned_cols=35 Identities=34% Similarity=0.583 Sum_probs=29.0
Q ss_pred CHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHH
Q psy744 305 TLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDIL 340 (405)
Q Consensus 305 ~l~~a~~~m~~~~~~~lpVvd~~g~lvGiIt~~DIl 340 (405)
.+.+.++.+.+.+...+.|.. +|+++|+|...|.+
T Consensus 120 ~~~~~~~~la~~G~T~v~VA~-d~~l~GvIalaD~i 154 (156)
T 1svj_A 120 DVDQKVDQVARQGATPLVVVE-GSRVLGVIALKDIV 154 (156)
T ss_dssp HHHHHHHHHHHTTCEEEEEEE-TTEEEEEEEEEECC
T ss_pred HHHHHHHHHHhCCCCEEEEEE-CCEEEEEEEEecCC
Confidence 377788888889988888886 69999999988754
No 132
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=23.18 E-value=38 Score=29.25 Aligned_cols=24 Identities=21% Similarity=0.155 Sum_probs=17.3
Q ss_pred CCCEEEEEcCCCcEEEEEeHHHHH
Q psy744 317 EVHRLVVVDEDDHVLGVLSLSDIL 340 (405)
Q Consensus 317 ~~~~lpVvd~~g~lvGiIt~~DIl 340 (405)
+-+.-||+|.+|+++||-+..|=.
T Consensus 125 GdSGsPVvn~dG~VIGVHt~s~~~ 148 (213)
T 3fan_A 125 GDSGSPVITEAGELVGVHTGSNKQ 148 (213)
T ss_dssp CSTTCEEEETTSCEEEEEEC----
T ss_pred CCCCCccCCCCCcEEEEEeccCCc
Confidence 444679999999999999988743
No 133
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=22.21 E-value=59 Score=25.22 Aligned_cols=26 Identities=12% Similarity=0.169 Sum_probs=17.7
Q ss_pred HHHHHHHHH-hcCCCEEEEECCCCcEE
Q psy744 234 IIHALRKFL-ERRVSALPMTDSEGHLV 259 (405)
Q Consensus 234 l~~a~~~m~-~~~~~~lpVvd~~g~lv 259 (405)
+...++.+. ..+...+.|+|.+|..+
T Consensus 37 l~~~~~~~~~~~~~~~i~v~d~~G~~~ 63 (131)
T 1p0z_A 37 IKALIDPMRSFSDATYITVGDASGQRL 63 (131)
T ss_dssp HHHHHHHHHHHSCCSEEEEEETTSBEE
T ss_pred HHHHHHHHHHhcCCCEEEEEcCCCcEE
Confidence 444555444 56888999999888653
No 134
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=21.50 E-value=60 Score=25.65 Aligned_cols=27 Identities=11% Similarity=0.043 Sum_probs=19.6
Q ss_pred CCHHHHHHHHH-hcCCCEEEEECCCCcE
Q psy744 232 TSIIHALRKFL-ERRVSALPMTDSEGHL 258 (405)
Q Consensus 232 ~~l~~a~~~m~-~~~~~~lpVvd~~g~l 258 (405)
..+...++.+. ..+...+.|+|.+|..
T Consensus 41 ~~l~~~~~~~~~~~~~~~i~v~d~~G~~ 68 (142)
T 3by8_A 41 SGIQAIAEAVRKRNDLLFIVVTDMQSLR 68 (142)
T ss_dssp CSHHHHHHHHHHHTTCSEEEEEETTCBB
T ss_pred HHHHHHHHHHHhhcCCcEEEEECCCCcE
Confidence 45666666665 5688899999988744
No 135
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=21.17 E-value=66 Score=24.89 Aligned_cols=17 Identities=24% Similarity=0.475 Sum_probs=14.2
Q ss_pred EEEECCCCcEEEEEeHH
Q psy744 249 LPMTDSEGHLVDIFAKF 265 (405)
Q Consensus 249 lpVvd~~g~lvGivt~~ 265 (405)
.||.+++|+++|+|...
T Consensus 106 ~PV~~~~g~viGvv~vg 122 (131)
T 1p0z_A 106 SPIQDATGKVIGIVSVG 122 (131)
T ss_dssp EEEECTTCCEEEEEEEE
T ss_pred EeEECCCCCEEEEEEEE
Confidence 59998789999998753
No 136
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=20.43 E-value=68 Score=25.31 Aligned_cols=22 Identities=14% Similarity=0.113 Sum_probs=16.7
Q ss_pred EEEEECCCCcEEEEEeHHHHHH
Q psy744 248 ALPMTDSEGHLVDIFAKFDVIN 269 (405)
Q Consensus 248 ~lpVvd~~g~lvGivt~~Dl~~ 269 (405)
..||.|++|+++|+|+..-.+.
T Consensus 110 ~~PV~~~~g~viGvv~vg~~~~ 131 (142)
T 3by8_A 110 FTPIYDENHKQIGVVAIGLELS 131 (142)
T ss_dssp EEEEECTTSCEEEEEEEEEEHH
T ss_pred EEeEEcCCCCEEEEEEEeEEHH
Confidence 3599987899999998655443
Done!