RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy744
(405 letters)
>d2v8qe1 d.37.1.1 (E:182-326) 5'-AMP-activated protein kinase
subunit gamma-1, AMPKg {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 145
Score = 107 bits (267), Expect = 1e-28
Identities = 82/144 (56%), Positives = 108/144 (75%)
Query: 204 LPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFA 263
PKP F++K+L +L+IGTY N+ V T + AL F++ RVSALP+ D +G +VDI++
Sbjct: 1 FPKPEFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYS 60
Query: 264 KFDVINLAAEKTYTNLDVTLKEANEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVV 323
KFDVINLAAEKTY NLDV++ +A +H++ +FEGV KC L ETL ++ R+V AEVHRLVV
Sbjct: 61 KFDVINLAAEKTYNNLDVSVTKALQHRSHYFEGVLKCYLHETLEAIINRLVEAEVHRLVV 120
Query: 324 VDEDDHVLGVLSLSDILVYLVLKP 347
VDE D V G++SLSDIL LVL
Sbjct: 121 VDEHDVVKGIVSLSDILQALVLTG 144
Score = 34.4 bits (78), Expect = 0.008
Identities = 27/129 (20%), Positives = 47/129 (36%), Gaps = 20/129 (15%)
Query: 91 IPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKI------- 143
I T A + + T V A V + + A P + V + + D I +
Sbjct: 16 IGTYANIAMVRTTTPVYVALGIFVQHRVSALP-VVDEKGRVVDIYSKFDVINLAAEKTYN 74
Query: 144 -----------LQMYYTSSSITMEELEE-HKLETNLIDYKIHRLPVIDEMGNVLYILTHK 191
+ +Y + E + L++ ++HRL V+DE V I++
Sbjct: 75 NLDVSVTKALQHRSHYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDEHDVVKGIVSLS 134
Query: 192 RILRFLFLY 200
IL+ L L
Sbjct: 135 DILQALVLT 143
>d2nyca1 d.37.1.1 (A:181-320) Nuclear protein SNF4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 140
Score = 92.2 bits (228), Expect = 4e-23
Identities = 50/137 (36%), Positives = 86/137 (62%)
Query: 209 FLNKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVI 268
FL + DL I T +N+++ T +I ++ + RVS++P+ D G+L++++ +DV+
Sbjct: 3 FLKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVL 62
Query: 269 NLAAEKTYTNLDVTLKEANEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDD 328
L Y +L +++ EA ++D FEGV C ++ L T+M+ I +A VHR VVD+
Sbjct: 63 GLIKGGIYNDLSLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVG 122
Query: 329 HVLGVLSLSDILVYLVL 345
++GVL+LSDIL Y++L
Sbjct: 123 RLVGVLTLSDILKYILL 139
Score = 42.5 bits (99), Expect = 1e-05
Identities = 18/103 (17%), Positives = 37/103 (35%), Gaps = 2/103 (1%)
Query: 167 LIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVE 226
L ++ +P+IDE G ++ + +L + S + +E V
Sbjct: 35 LTQGRVSSVPIIDENGYLINVYEAYDVLGLIKG--GIYNDLSLSVGEALMRRSDDFEGVY 92
Query: 227 TVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVIN 269
T + + + + RV + D G LV + D++
Sbjct: 93 TCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILK 135
Score = 34.0 bits (77), Expect = 0.010
Identities = 13/76 (17%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Query: 124 WDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEEHKLETNLIDYKIHRLPVIDEMGN 183
+ VG + +Y + + + + ++ + ++HR V+D++G
Sbjct: 69 IYNDLSLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRK-----ARVHRFFVVDDVGR 123
Query: 184 VLYILTHKRILRFLFL 199
++ +LT IL+++ L
Sbjct: 124 LVGVLTLSDILKYILL 139
>d2ooxe2 d.37.1.1 (E:182-334) Uncharacterized protein C1556.08c
{Schizosaccharomyces pombe [TaxId: 4896]}
Length = 153
Score = 86.2 bits (212), Expect = 8e-21
Identities = 48/146 (32%), Positives = 87/146 (59%)
Query: 214 LRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAE 273
L + IGT+ N+ T + ET + ++ E+ +SA+P+ +SEG L++++ DV++L +
Sbjct: 3 LNQMTIGTWSNLATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVYESVDVMHLIQD 62
Query: 274 KTYTNLDVTLKEANEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGV 333
Y+NLD+++ EA + F+GV C + L + + I + VHRL VVDE+ + G+
Sbjct: 63 GDYSNLDLSVGEALLKRPANFDGVHTCRATDRLDGIFDAIKHSRVHRLFVVDENLKLEGI 122
Query: 334 LSLSDILVYLVLKPSDDDIGVDETSS 359
LSL+DIL Y++ + ++T +
Sbjct: 123 LSLADILNYIIYDKTTTPGVPEQTDN 148
Score = 28.4 bits (62), Expect = 0.96
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 161 HKLETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFL 197
+ + ++HRL V+DE + IL+ IL ++
Sbjct: 96 DGIFDAIKHSRVHRLFVVDENLKLEGILSLADILNYI 132
>d2v8qe2 d.37.1.1 (E:23-181) 5'-AMP-activated protein kinase subunit
gamma-1, AMPKg {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 159
Score = 76.8 bits (188), Expect = 2e-17
Identities = 87/157 (55%), Positives = 102/157 (64%), Gaps = 28/157 (17%)
Query: 75 NQIFVKFFKFHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGM 134
+ ++ F K H+CYDLIPTS+KLVVFDT L VKKAFFALV NG+RAAPLWDS Q +VGM
Sbjct: 3 SSVYTTFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGM 62
Query: 135 LTITDFIKILQMYYTSSSITMEELEEH---------------------------KLETNL 167
LTITDFI IL YY S+ + + ELEEH ++L
Sbjct: 63 LTITDFINILHRYYKSALVQIYELEEHKIETWREVYLQDSFKPLVCISPNASLFDAVSSL 122
Query: 168 IDYKIHRLPVID-EMGNVLYILTHKRILRFLFLYIND 203
I KIHRLPVID E GN LYILTHKRIL+FL L+I +
Sbjct: 123 IRNKIHRLPVIDPESGNTLYILTHKRILKFLKLFITE 159
Score = 54.4 bits (130), Expect = 1e-09
Identities = 32/154 (20%), Positives = 59/154 (38%), Gaps = 12/154 (7%)
Query: 207 PSFL-NKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSE-GHLVDIFAK 264
+F+ + DL T + + A + V A P+ DS+ V +
Sbjct: 7 TTFMKSHRCYDLIP-TSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTI 65
Query: 265 FDVINLAAEKTYTNLDVTLKEANEHKTDWFEGVEKCLL--------DETLFTVMERIVRA 316
D IN+ + L + W E + + +LF + ++R
Sbjct: 66 TDFINILHRYYKSALVQIYELEEHKIETWREVYLQDSFKPLVCISPNASLFDAVSSLIRN 125
Query: 317 EVHRLVVVD-EDDHVLGVLSLSDILVYLVLKPSD 349
++HRL V+D E + L +L+ IL +L L ++
Sbjct: 126 KIHRLPVIDPESGNTLYILTHKRILKFLKLFITE 159
>d2ooxe1 d.37.1.1 (E:3-181) Uncharacterized protein C1556.08c
{Schizosaccharomyces pombe [TaxId: 4896]}
Length = 179
Score = 61.9 bits (149), Expect = 6e-12
Identities = 48/175 (27%), Positives = 77/175 (44%), Gaps = 37/175 (21%)
Query: 65 DFADLEKDGGNQIFVKFFKFHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLW 124
D + +K +I F + YD++PTS +L+VFD L VK + L N I +APLW
Sbjct: 1 DVQETQKGALKEIQ-AFIRSRTSYDVLPTSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLW 59
Query: 125 DSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEEHK---------------------- 162
DS ++ G+LT+ DF+ +++ YY SSS E K
Sbjct: 60 DSEANKFAGLLTMADFVNVIKYYYQSSSFPEAIAEIDKFRLLGLREVERKIGAIPPETIY 119
Query: 163 ---------LETNLIDYKIHRLPVIDEMGN-----VLYILTHKRILRFLFLYIND 203
+ + R+P+ID G ++ +LT RIL+F+ + +
Sbjct: 120 VHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSVLTQYRILKFISMNCKE 174
Score = 48.8 bits (115), Expect = 2e-07
Identities = 21/161 (13%), Positives = 53/161 (32%), Gaps = 20/161 (12%)
Query: 208 SFL-NKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSE-GHLVDIFAKF 265
+F+ ++T D+ T + + +L + + P+ DSE +
Sbjct: 15 AFIRSRTSYDVLP-TSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDSEANKFAGLLTMA 73
Query: 266 DVINLAAEKTYTN------------LDVTLKEANEHKTDWFEGVEKCLLDETLFTVMERI 313
D +N+ ++ + L+E +L +
Sbjct: 74 DFVNVIKYYYQSSSFPEAIAEIDKFRLLGLREVERKIGAIPPETIYVHPMHSLMDACLAM 133
Query: 314 VRAEVHRLVVVDEDD-----HVLGVLSLSDILVYLVLKPSD 349
++ R+ ++D D ++ VL+ IL ++ + +
Sbjct: 134 SKSRARRIPLIDVDGETGSEMIVSVLTQYRILKFISMNCKE 174
>d2rc3a1 d.37.1.1 (A:23-149) Uncharacterized protein NE2398
{Nitrosomonas europaea [TaxId: 915]}
Length = 127
Score = 56.7 bits (136), Expect = 1e-10
Identities = 30/133 (22%), Positives = 54/133 (40%), Gaps = 8/133 (6%)
Query: 212 KTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLA 271
KT++ L V + + S+ +A++K + AL + + LV I + D +
Sbjct: 2 KTVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMK-DEKLVGILTERDFSRKS 60
Query: 272 AEKTYTNLDVTLKEANEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVL 331
D +KE + + L+ T M I V L V+D D V+
Sbjct: 61 YLLDKPVKDTQVKEIMTRQVAY------VDLNNTNEDCMALITEMRVRHLPVLD-DGKVI 113
Query: 332 GVLSLSDILVYLV 344
G+LS+ D++ +
Sbjct: 114 GLLSIGDLVKDAI 126
Score = 32.0 bits (72), Expect = 0.047
Identities = 20/119 (16%), Positives = 43/119 (36%), Gaps = 16/119 (13%)
Query: 90 LIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYT 149
L +V V A + + I A + ++ VG+LT DF + +
Sbjct: 8 LQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMK--DEKLVGILTERDFSRKSYLLDK 65
Query: 150 SSSITMEELEEHKLETN-------------LIDYKIHRLPVIDEMGNVLYILTHKRILR 195
T + + + + ++ LPV+D+ G V+ +L+ +++
Sbjct: 66 PVKDTQVKEIMTRQVAYVDLNNTNEDCMALITEMRVRHLPVLDD-GKVIGLLSIGDLVK 123
>d2yzqa1 d.37.1.1 (A:123-278) Uncharacterized protein PH1780
{Pyrococcus horikoshii [TaxId: 53953]}
Length = 156
Score = 56.6 bits (135), Expect = 2e-10
Identities = 32/155 (20%), Positives = 56/155 (36%), Gaps = 25/155 (16%)
Query: 215 RDLKIGTY--ENVETVAEETSIIHALRKFLERRVSALPMTDSEG---HLVDIFAKFDVIN 269
+ ++I Y V V E T + AL+ L ALP+ DSEG +VD
Sbjct: 2 KGVEIEPYYQRYVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDLLRDSE 61
Query: 270 LAAEKTYTNLDVTLKEANEHKTDWFEGVEKCLLDETLFTV-------------------- 309
+ T L + +E ++ EK L V
Sbjct: 62 IVRIMKSTELAASSEEEWILESHPTLLFEKFELQLPNKPVAEIMTRDVIVATPHMTVHEV 121
Query: 310 MERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLV 344
++ + + +L V+ + ++G++ D+L LV
Sbjct: 122 ALKMAKYSIEQLPVIRGEGDLIGLIRDFDLLKVLV 156
Score = 36.1 bits (82), Expect = 0.003
Identities = 19/123 (15%), Positives = 36/123 (29%), Gaps = 21/123 (17%)
Query: 167 LIDYKIHRLPVIDEMGNVLYILTHK-------------------RILRFLFLYINDLPKP 207
L+ LPV+D GN++ I+ L +
Sbjct: 30 LLLSNSMALPVVDSEGNLVGIVDETDLLRDSEIVRIMKSTELAASSEEEWILESHPTLLF 89
Query: 208 SFLNKTLRDLKIGTYEN--VETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKF 265
L + + V ++ K + + LP+ EG L+ + F
Sbjct: 90 EKFELQLPNKPVAEIMTRDVIVATPHMTVHEVALKMAKYSIEQLPVIRGEGDLIGLIRDF 149
Query: 266 DVI 268
D++
Sbjct: 150 DLL 152
Score = 33.8 bits (76), Expect = 0.013
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 168 IDYKIHRLPVIDEMGNVLYILTHKRILRFL 197
Y I +LPVI G+++ ++ +L+ L
Sbjct: 126 AKYSIEQLPVIRGEGDLIGLIRDFDLLKVL 155
>d1pvma4 d.37.1.1 (A:1-142) Hypothetical protein Ta0289 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 142
Score = 54.9 bits (131), Expect = 6e-10
Identities = 27/137 (19%), Positives = 56/137 (40%), Gaps = 7/137 (5%)
Query: 224 NVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDVTL 283
N +TV T++ A++ E + L + D G+ V + ++ +I + +V +
Sbjct: 12 NFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIPRNKKPDEVPI 71
Query: 284 KEANEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYL 343
+ + V + + R VVD+ V+G+++L+D+ YL
Sbjct: 72 RLVMRKPIPKVKSDYDV------KDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYL 125
Query: 344 VLKPSDDDIGVDETSSD 360
+ S DI + + D
Sbjct: 126 S-RASITDILLSHRTKD 141
Score = 34.5 bits (78), Expect = 0.008
Identities = 12/70 (17%), Positives = 29/70 (41%)
Query: 128 HQQYVGMLTITDFIKILQMYYTSSSITMEELEEHKLETNLIDYKIHRLPVIDEMGNVLYI 187
++++ D + I + + + + L + + R V+D+ G V+ I
Sbjct: 56 IKRFIPRNKKPDEVPIRLVMRKPIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGI 115
Query: 188 LTHKRILRFL 197
+T + R+L
Sbjct: 116 VTLTDLSRYL 125
>d2o16a3 d.37.1.1 (A:20-158) Hypothetical protein VC0737 {Vibrio
cholerae [TaxId: 666]}
Length = 139
Score = 51.4 bits (122), Expect = 1e-08
Identities = 14/122 (11%), Positives = 42/122 (34%), Gaps = 2/122 (1%)
Query: 224 NVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDVTL 283
+ T+ ++ A + +P+ D+ L+ I ++ D++ +
Sbjct: 11 HPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQESSLQRSAQGDS 70
Query: 284 KEANEHKTDWFEGVEKCLLDETLFT-VMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVY 342
+ + + + + ++ L VV D ++G+++ SD +
Sbjct: 71 LAFETPLFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVA-KDVLVGIITDSDFVTI 129
Query: 343 LV 344
+
Sbjct: 130 AI 131
Score = 29.1 bits (64), Expect = 0.47
Identities = 16/124 (12%), Positives = 37/124 (29%), Gaps = 22/124 (17%)
Query: 94 SAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSI 153
+ + A + IR P +++ +G+++ D + + S+
Sbjct: 9 TRHPHTLLRTHTLNDAKHLMEALDIRHVP-IVDANKKLLGIVSQRDLLAAQESSLQRSAQ 67
Query: 154 TMEELEEHKLE--------------------TNLIDYKIHRLPVIDEMGNVLYILTHKRI 193
E L + +KI LPV+ + ++ I+T
Sbjct: 68 GDSLAFETPLFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAK-DVLVGIITDSDF 126
Query: 194 LRFL 197
+
Sbjct: 127 VTIA 130
>d1jr1a4 d.37.1.1 (A:113-232) Type II inosine monophosphate
dehydrogenase CBS domains {Chinese hamster (Cricetulus
griseus) [TaxId: 10029]}
Length = 120
Score = 49.8 bits (118), Expect = 2e-08
Identities = 20/120 (16%), Positives = 46/120 (38%), Gaps = 11/120 (9%)
Query: 224 NVETVAEETSIIHALRKFLERRVSALPMT---DSEGHLVDIFAKFDVINLAAEKTYTNLD 280
+ ++ + + +P+T LV I + D+ L E+
Sbjct: 5 DPVVLSPKDRVRDVFEAKARHGFCGIPITDTGRMGSRLVGIISSRDIDFLKEEEHDR--- 61
Query: 281 VTLKEANEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDIL 340
L+E + D TL E + R++ +L +V+E+D ++ +++ +D+
Sbjct: 62 -FLEEIMTKREDLVVAPA----GITLKEANEILQRSKKGKLPIVNENDELVAIIARTDLK 116
Score = 35.1 bits (80), Expect = 0.003
Identities = 9/46 (19%), Positives = 18/46 (39%)
Query: 223 ENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVI 268
E++ ++ A + LP+ + LV I A+ D+
Sbjct: 71 EDLVVAPAGITLKEANEILQRSKKGKLPIVNENDELVAIIARTDLK 116
Score = 32.4 bits (73), Expect = 0.031
Identities = 6/32 (18%), Positives = 15/32 (46%)
Query: 164 ETNLIDYKIHRLPVIDEMGNVLYILTHKRILR 195
L K +LP+++E ++ I+ + +
Sbjct: 86 NEILQRSKKGKLPIVNENDELVAIIARTDLKK 117
Score = 26.6 bits (58), Expect = 2.4
Identities = 11/60 (18%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Query: 83 KFHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIK 142
+++ LVV + +K+A L + P+ + + + V ++ TD K
Sbjct: 59 HDRFLEEIMTKREDLVVAPAGITLKEANEILQRSKKGKLPIVNE-NDELVAIIARTDLKK 117
>d2yzia1 d.37.1.1 (A:4-135) Uncharacterized protein PH0107
{Pyrococcus horikoshii [TaxId: 53953]}
Length = 132
Score = 49.0 bits (116), Expect = 6e-08
Identities = 21/117 (17%), Positives = 48/117 (41%), Gaps = 8/117 (6%)
Query: 224 NVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDVTL 283
+ V TS+ A R +E V +L + + +G++V F K D+I
Sbjct: 14 KLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIVPGLPYDIPVE 73
Query: 284 KEANEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDIL 340
+ + + L V+ ++ + +++ + + ++G+ +LSD+L
Sbjct: 74 RIMTRNLITANV-------NTPLGEVLRKMAEHRIKHILIEE-EGKIVGIFTLSDLL 122
Score = 27.8 bits (61), Expect = 1.4
Identities = 11/98 (11%), Positives = 33/98 (33%), Gaps = 4/98 (4%)
Query: 103 QLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEEHK 162
+L+++ +LV + + + + + + + +
Sbjct: 29 RLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIVPGLPYDIPVERIMTRNLITANVNTP 88
Query: 163 LETNL---IDYKIHRLPVIDEMGNVLYILTHKRILRFL 197
L L +++I + + +E G ++ I T +L
Sbjct: 89 LGEVLRKMAEHRIKHILIEEE-GKIVGIFTLSDLLEAS 125
>d2ef7a1 d.37.1.1 (A:1-127) Uncharacterized protein ST2348
{Sulfolobus tokodaii [TaxId: 111955]}
Length = 127
Score = 47.9 bits (113), Expect = 1e-07
Identities = 16/121 (13%), Positives = 44/121 (36%), Gaps = 9/121 (7%)
Query: 224 NVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDVTL 283
V +V ++ + + E+ + ++ + D V I + D++ +
Sbjct: 13 QVISVTKDAKLNDIAKVMTEKNIGSVIVVD-GNKPVGIITERDIVKAIGKGKSLETK--- 68
Query: 284 KEANEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYL 343
+ + D + + + + + L VVD+ ++ G++S+ DI +
Sbjct: 69 -----AEEFMTASLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAI 123
Query: 344 V 344
Sbjct: 124 D 124
Score = 33.3 bits (75), Expect = 0.013
Identities = 14/74 (18%), Positives = 26/74 (35%), Gaps = 3/74 (4%)
Query: 124 WDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEEHKLETNLIDYKIHRLPVIDEMGN 183
D V G T + + + + + I LPV+D+ GN
Sbjct: 53 RDIVKAIGKGKSLETKAEEFMTASLITIREDSPITGALA---LMRQFNIRHLPVVDDKGN 109
Query: 184 VLYILTHKRILRFL 197
+ I++ + I R +
Sbjct: 110 LKGIISIRDITRAI 123
Score = 26.4 bits (57), Expect = 4.0
Identities = 7/35 (20%), Positives = 15/35 (42%)
Query: 239 RKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAE 273
+ + LP+ D +G+L I + D+ +
Sbjct: 91 ALMRQFNIRHLPVVDDKGNLKGIISIRDITRAIDD 125
>d1y5ha3 d.37.1.1 (A:2-124) Hypothetical protein Rv2626c
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 123
Score = 47.6 bits (112), Expect = 2e-07
Identities = 19/120 (15%), Positives = 44/120 (36%), Gaps = 7/120 (5%)
Query: 224 NVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDVTL 283
V V E ++ A + E + ALP+ + L + D++ T
Sbjct: 10 GVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAGLDPNTATA 69
Query: 284 KEANEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYL 343
E + + ++ + +V R+ V+ + ++G+++ +DI +L
Sbjct: 70 GELARDSIYYVDANASI------QEMLNVMEEHQVRRVPVIS-EHRLVGIVTEADIARHL 122
Score = 34.5 bits (78), Expect = 0.006
Identities = 11/74 (14%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Query: 124 WDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEEHKLETNLIDYKIHRLPVIDEMGN 183
+ + + + ++ S ++ + ++++ R+PVI E
Sbjct: 50 DRDIVIKGLAAGLDPNTATAGELARDSIYYVDANASIQEMLNVMEEHQVRRVPVISE-HR 108
Query: 184 VLYILTHKRILRFL 197
++ I+T I R L
Sbjct: 109 LVGIVTEADIARHL 122
>d1o50a3 d.37.1.1 (A:1-145) Hypothetical protein TM0935 {Thermotoga
maritima [TaxId: 2336]}
Length = 145
Score = 46.9 bits (110), Expect = 5e-07
Identities = 23/137 (16%), Positives = 53/137 (38%), Gaps = 7/137 (5%)
Query: 214 LRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAE 273
++D+ V E+T I + + LE V+ + LV + ++ ++
Sbjct: 3 VKDVCKLISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDNKLVGMIPVMHLLKVSGF 62
Query: 274 KTYTNLDVTLKEANEHKTDWFEGVEKCLLD-------ETLFTVMERIVRAEVHRLVVVDE 326
+ + + K + + +LD L ++ ++ + + VVDE
Sbjct: 63 HFFGFIPKEELIRSSMKRLIAKNASEIMLDPVYVHMDTPLEEALKLMIDNNIQEMPVVDE 122
Query: 327 DDHVLGVLSLSDILVYL 343
++G L+ +IL+ L
Sbjct: 123 KGEIVGDLNSLEILLAL 139
Score = 30.3 bits (67), Expect = 0.19
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 168 IDYKIHRLPVIDEMGNVLYILTHKRILRFLF 198
ID I +PV+DE G ++ L IL L+
Sbjct: 110 IDNNIQEMPVVDEKGEIVGDLNSLEILLALW 140
>d1pbja3 d.37.1.1 (A:2-121) Hypothetical protein MTH1622 {Archaeon
Methanobacterium thermoautotrophicum [TaxId: 145262]}
Length = 120
Score = 46.0 bits (108), Expect = 5e-07
Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 9/117 (7%)
Query: 224 NVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDVTL 283
+V+T+ S+ LR ++E + + EG V I +DV+ AE
Sbjct: 9 DVDTIDITASLEDVLRNYVENAKGSSVVVK-EGVRVGIVTTWDVLEAIAEGDDLAEVKVW 67
Query: 284 KEANEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDIL 340
+ T+ E++V+ V RL+V + DD ++GV+S +DIL
Sbjct: 68 EVMERDLVTISP-------RATIKEAAEKMVKNVVWRLLVEE-DDEIIGVISATDIL 116
Score = 30.6 bits (68), Expect = 0.12
Identities = 7/73 (9%), Positives = 25/73 (34%), Gaps = 1/73 (1%)
Query: 123 LWDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEEHKLETNLIDYKIHRLPVIDEMG 182
+ + + +K+ ++ + ++ + RL V ++
Sbjct: 46 VTTWDVLEAIAEGDDLAEVKVWEVMERDLVTISPRATIKEAAEKMVKNVVWRLLVEED-D 104
Query: 183 NVLYILTHKRILR 195
++ +++ ILR
Sbjct: 105 EIIGVISATDILR 117
>d2riha1 d.37.1.1 (A:2-132) Uncharacterized protein PAE2072
{Pyrobaculum aerophilum [TaxId: 13773]}
Length = 131
Score = 44.2 bits (103), Expect = 3e-06
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 11/119 (9%)
Query: 224 NVETVAEETSIIHALRKFLERRVSALPMTD--SEGHLVDIFAKFDVINLAAEKTYTNLDV 281
++ E +I + + RV +T + V + ++ D++ A++ +
Sbjct: 10 PPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQRLDLDGPA 69
Query: 282 TLKEANEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDIL 340
+ + V E++ R + +VVV+++ ++GVLS+ D+
Sbjct: 70 MPIANSPITVLDTDPVHVAA---------EKMRRHNIRHVVVVNKNGELVGVLSIRDLC 119
Score = 32.2 bits (72), Expect = 0.039
Identities = 5/72 (6%), Positives = 23/72 (31%), Gaps = 1/72 (1%)
Query: 124 WDSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEEHKLETNLIDYKIHRLPVIDEMGN 183
+ + + + ++ + E + I + V+++ G
Sbjct: 50 VSERDILRAVAQRLDLDGPAMPIANSPITVLDTDPVHVAAEKMR-RHNIRHVVVVNKNGE 108
Query: 184 VLYILTHKRILR 195
++ +L+ + +
Sbjct: 109 LVGVLSIRDLCF 120
Score = 27.2 bits (59), Expect = 2.2
Identities = 6/34 (17%), Positives = 13/34 (38%)
Query: 236 HALRKFLERRVSALPMTDSEGHLVDIFAKFDVIN 269
A K + + + + G LV + + D+
Sbjct: 87 VAAEKMRRHNIRHVVVVNKNGELVGVLSIRDLCF 120
>d2yzqa2 d.37.1.1 (A:1-122) Uncharacterized protein PH1780
{Pyrococcus horikoshii [TaxId: 53953]}
Length = 122
Score = 43.7 bits (102), Expect = 3e-06
Identities = 24/121 (19%), Positives = 47/121 (38%), Gaps = 13/121 (10%)
Query: 224 NVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDVTL 283
N T+ + +AL F + +V + P+ + EG LV I +
Sbjct: 10 NPVTITLPATRNYALELFKKYKVRSFPVVNKEGKLVGII-------------SVKRILVN 56
Query: 284 KEANEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYL 343
+ + V ++TL + ++ + R+VVVD +G+L++ DI+
Sbjct: 57 PDEEQLAMLVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRY 116
Query: 344 V 344
Sbjct: 117 F 117
Score = 33.7 bits (76), Expect = 0.010
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 161 HKLETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFLF 198
K +++Y R+ V+D G + ILT I+R F
Sbjct: 80 KKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRYF 117
Score = 26.8 bits (58), Expect = 2.5
Identities = 13/62 (20%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Query: 81 FFKFHKCYDLIPTSAKLVVFDTQLLVKKAFFALVYNGIRAAPLWDSVHQQYVGMLTITDF 140
+ + + V +KKA ++ R + DS + VG+LT+ D
Sbjct: 54 LVNPDEEQLAMLVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDS-KGKPVGILTVGDI 112
Query: 141 IK 142
I+
Sbjct: 113 IR 114
>d1zfja4 d.37.1.1 (A:95-220) Type II inosine monophosphate
dehydrogenase CBS domains {Streptococcus pyogenes
[TaxId: 1314]}
Length = 126
Score = 43.7 bits (102), Expect = 4e-06
Identities = 19/119 (15%), Positives = 40/119 (33%), Gaps = 13/119 (10%)
Query: 224 NVETVAEETSIIHALRKFLERRVSALP--MTDSEGHLVDIFAKFDVINLAAEKTYTNLDV 281
+ + E + A R+S +P T + LV I D+ ++ + +
Sbjct: 6 DPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFISDYNAPISEHM 65
Query: 282 TLKEANEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDIL 340
T + L T + + +L +VD + G++++ DI
Sbjct: 66 TSEHLVTAAVGT-----------DLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIE 113
Score = 28.7 bits (63), Expect = 0.66
Identities = 19/99 (19%), Positives = 38/99 (38%), Gaps = 9/99 (9%)
Query: 106 VKKAFFALVYNGIRAAPLW-DSVHQQYVGMLTITDFIKILQMYYTSSSITMEELEEHKLE 164
V +A + I P+ +++ VG++T D I S E
Sbjct: 16 VSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFISDYNAPISEHMTSEHLVTAAV 75
Query: 165 TNLID--------YKIHRLPVIDEMGNVLYILTHKRILR 195
++ ++I +LP++D G + ++T K I +
Sbjct: 76 GTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEK 114
>d1vr9a3 d.37.1.1 (A:1-121) Hypothetical protein TM0892, CBS tandem
{Thermotoga maritima [TaxId: 2336]}
Length = 121
Score = 42.6 bits (99), Expect = 7e-06
Identities = 20/130 (15%), Positives = 45/130 (34%), Gaps = 15/130 (11%)
Query: 217 LKIGTY--ENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEK 274
+K+ + ++ V E ++ L + + + + + D EGH +
Sbjct: 1 MKVKKWVTQDFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVV------------ 48
Query: 275 TYTNLDVTLKEANEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVL 334
+ L + ++ + + + + L VVDE+ + G +
Sbjct: 49 -NKEDLLDLDLDSSVFNKVSLPDFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAV 107
Query: 335 SLSDILVYLV 344
SL D L L+
Sbjct: 108 SLHDFLEALI 117
Score = 35.3 bits (80), Expect = 0.003
Identities = 28/142 (19%), Positives = 43/142 (30%), Gaps = 26/142 (18%)
Query: 132 VGMLTITDFIKILQMYYTSSSITMEELEEHKLETNLIDYKIHRLPVIDEMGNVLYILTHK 191
V DF + S T+ E + Y+ + V D G+ ++ +
Sbjct: 3 VKKWVTQDFPMV------EESATVRECLHRMRQ-----YQTNECIVKDREGHFRGVVNKE 51
Query: 192 RILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPM 251
+L V EE +I HAL FLE + LP+
Sbjct: 52 DLLDLDLDSSVF---------------NKVSLPDFFVHEEDNITHALLLFLEHQEPYLPV 96
Query: 252 TDSEGHLVDIFAKFDVINLAAE 273
D E L + D + E
Sbjct: 97 VDEEMRLKGAVSLHDFLEALIE 118
>d3ddja2 d.37.1.1 (A:1-135) Uncharacterized protein SSO3205
{Sulfolobus solfataricus [TaxId: 2287]}
Length = 135
Score = 41.9 bits (97), Expect = 2e-05
Identities = 17/124 (13%), Positives = 41/124 (33%), Gaps = 13/124 (10%)
Query: 224 NVETVAEETSIIHALRKFLERRVSALPMTDSE-------GHLVDIFAKFDVINLAAEKTY 276
N +++E + A +K E + + + + + L+ + + + Y
Sbjct: 10 NPPILSKEDRLGSAFKKINEGGIGRIIVANEKIEGLLTTRDLLSTVESYCKDSCSQGDLY 69
Query: 277 TNLDVTLKEANEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSL 336
+ + FT + +V L VVD +D +G+++
Sbjct: 70 HISTTPIIDYMTPNPVT------VYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIVTE 123
Query: 337 SDIL 340
+ L
Sbjct: 124 REFL 127
Score = 32.7 bits (73), Expect = 0.031
Identities = 18/107 (16%), Positives = 35/107 (32%), Gaps = 1/107 (0%)
Query: 167 LIDYKIHRLPVIDEMGNVLYILTHKRILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVE 226
+ + I R+ V +E L + + + T + T V
Sbjct: 27 INEGGIGRIIVANEKIEGLLTTRDLLSTVESYCKDSCSQGDLYHISTTPIIDYMTPNPV- 85
Query: 227 TVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAE 273
TV + A+ + R +LP+ D V I + + + L +
Sbjct: 86 TVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIVTEREFLLLYKD 132
Score = 29.2 bits (64), Expect = 0.43
Identities = 9/57 (15%), Positives = 18/57 (31%)
Query: 141 IKILQMYYTSSSITMEELEEHKLETNLIDYKIHRLPVIDEMGNVLYILTHKRILRFL 197
I+ + +E ++ LPV+D + I+T + L
Sbjct: 74 TPIIDYMTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIVTEREFLLLY 130
>d3ddja1 d.37.1.1 (A:136-276) Uncharacterized protein SSO3205
{Sulfolobus solfataricus [TaxId: 2287]}
Length = 141
Score = 41.5 bits (96), Expect = 3e-05
Identities = 20/123 (16%), Positives = 49/123 (39%), Gaps = 5/123 (4%)
Query: 224 NVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDVTL 283
V+T+ +E + A++ L R LP+ D + +V I + I A+
Sbjct: 11 KVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLAKAVDKLDPDYF 70
Query: 284 KE--ANEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILV 341
+ +++ M + + L+++++D+ + G+++ D+L+
Sbjct: 71 YGKVVKDVMVTNLVTIDELASVNRAAAEM---IVKRIGSLLILNKDNTIRGIITERDLLI 127
Query: 342 YLV 344
L
Sbjct: 128 ALH 130
Score = 27.7 bits (60), Expect = 1.5
Identities = 7/32 (21%), Positives = 17/32 (53%)
Query: 166 NLIDYKIHRLPVIDEMGNVLYILTHKRILRFL 197
+I +I L ++++ + I+T + +L L
Sbjct: 98 EMIVKRIGSLLILNKDNTIRGIITERDLLIAL 129
>d1yava3 d.37.1.1 (A:13-144) Hypothetical protein YkuL {Bacillus
subtilis [TaxId: 1423]}
Length = 132
Score = 41.2 bits (95), Expect = 3e-05
Identities = 17/132 (12%), Positives = 42/132 (31%), Gaps = 5/132 (3%)
Query: 212 KTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLA 271
T+ I + V V ++ HAL + +A+P+ D L + ++N
Sbjct: 2 ATVGQFMI-EADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSI 60
Query: 272 AEKTYTNLDVTLKEANEHKTDWFEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVL 331
+ ++ + + L + + + V +++
Sbjct: 61 FGLERIEFEKL----DQITVEEVMLTDIPRLHINDPIMKGFGMVINNGFVCVENDEQVFE 116
Query: 332 GVLSLSDILVYL 343
G+ + +L L
Sbjct: 117 GIFTRRVVLKEL 128
Score = 27.7 bits (60), Expect = 1.6
Identities = 5/27 (18%), Positives = 11/27 (40%)
Query: 171 KIHRLPVIDEMGNVLYILTHKRILRFL 197
+ V ++ I T + +L+ L
Sbjct: 102 NNGFVCVENDEQVFEGIFTRRVVLKEL 128
>d2yvxa2 d.37.1.1 (A:132-275) Magnesium transporter MgtE {Thermus
thermophilus [TaxId: 274]}
Length = 144
Score = 40.6 bits (94), Expect = 6e-05
Identities = 27/142 (19%), Positives = 50/142 (35%), Gaps = 21/142 (14%)
Query: 132 VGMLTITDFIKILQMYYTSSSITMEELEEHKLETNLIDYKIHRLPVIDEMGNVLYILTHK 191
G L +++ + +T+EE+ I+ + V+DE G + +L+ +
Sbjct: 3 AGGLMTPEYVAV------REGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLR 56
Query: 192 RILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPM 251
+ R +I V V +T R + + LP+
Sbjct: 57 D--------------LIVADPRTRVAEIMN-PKVVYVRTDTDQEEVARLMADYDFTVLPV 101
Query: 252 TDSEGHLVDIFAKFDVINLAAE 273
D EG LV I DV+++
Sbjct: 102 VDEEGRLVGIVTVDDVLDVLEA 123
>d2ouxa2 d.37.1.1 (A:136-262) Magnesium transporter MgtE
{Enterococcus faecalis [TaxId: 1351]}
Length = 127
Score = 39.0 bits (90), Expect = 2e-04
Identities = 20/142 (14%), Positives = 53/142 (37%), Gaps = 21/142 (14%)
Query: 132 VGMLTITDFIKILQMYYTSSSITMEELEEHKLETNLIDYKIHRLPVIDEMGNVLYILTHK 191
G + T+F+ I ++ T+ + I+ + V+D+ +++ +++ +
Sbjct: 3 AGAIMTTEFVSI------VANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLR 56
Query: 192 RILRFLFLYINDLPKPSFLNKTLRDLKIGTYENVETVAEETSIIHALRKFLERRVSALPM 251
++ + + E V +V + + A+P+
Sbjct: 57 DLIVNDDDTL---------------IADILNERVISVHVGDDQEDVAQTIRDYDFLAVPV 101
Query: 252 TDSEGHLVDIFAKFDVINLAAE 273
TD + HL+ I D+I++ +
Sbjct: 102 TDYDDHLLGIVTVDDIIDVIDD 123
Score = 32.5 bits (73), Expect = 0.026
Identities = 12/44 (27%), Positives = 23/44 (52%)
Query: 297 VEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDIL 340
V + + V + I + + V D DDH+LG++++ DI+
Sbjct: 75 VISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDII 118
>d2j9la1 d.37.1.1 (A:578-746) Chloride channel protein 5, ClC-5
{Human (Homo sapiens) [TaxId: 9606]}
Length = 169
Score = 37.6 bits (86), Expect = 9e-04
Identities = 17/136 (12%), Positives = 35/136 (25%), Gaps = 18/136 (13%)
Query: 227 TVAEETSIIHALRKFLERRVSALPMT--DSEGHLVDIFAKFDVINLAAEKTYTNLDVTLK 284
+ ++ E S P+ LV + D+I V
Sbjct: 21 LTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVVST 80
Query: 285 EANEHKTDWFEGVEKCLLDETLFTVMER----------------IVRAEVHRLVVVDEDD 328
L +++ I R R +V +
Sbjct: 81 SIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTHNG 140
Query: 329 HVLGVLSLSDILVYLV 344
+LG+++ D+L ++
Sbjct: 141 RLLGIITKKDVLKHIA 156
>d2d4za3 d.37.1.1 (A:527-606,A:691-770) Chloride channel protein,
CBS tandem {Marbled electric ray (Torpedo marmorata)
[TaxId: 7788]}
Length = 160
Score = 36.6 bits (83), Expect = 0.002
Identities = 16/140 (11%), Positives = 44/140 (31%), Gaps = 19/140 (13%)
Query: 224 NVETVAEETSIIHALRKFLERRVSALPMTDSEGHLVDIFAKFDVINLAAEKTYTNLDVTL 283
+V ++A ++ L + ++ P D+ + + + +
Sbjct: 20 DVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRISAYRRQ 79
Query: 284 KEANEHKTDWFEGVEK-----------CLLDETLFTVMERIVRAEVH--------RLVVV 324
+ E+ C +D++ F ++E + H V
Sbjct: 80 PFEEMLTLEEIYRWEQREKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYV 139
Query: 325 DEDDHVLGVLSLSDILVYLV 344
++GV++L++I +
Sbjct: 140 TSMGKLVGVVALAEIQAAIE 159
Score = 29.6 bits (65), Expect = 0.41
Identities = 7/40 (17%), Positives = 12/40 (30%), Gaps = 1/40 (2%)
Query: 156 EELEEHKLETNLIDYKIHRLPVIDEMGNVLYILTHKRILR 195
E K T + R V G ++ ++ I
Sbjct: 118 EGTSLQKTHTLFSLLGLDRAYVTSM-GKLVGVVALAEIQA 156
>d1tifa_ d.15.8.1 (A:) Translation initiation factor IF3, N-terminal
domain {Bacillus stearothermophilus [TaxId: 1422]}
Length = 76
Score = 25.8 bits (57), Expect = 2.6
Identities = 12/55 (21%), Positives = 25/55 (45%), Gaps = 7/55 (12%)
Query: 311 ERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVLKPSDDDIGVDETSSDSEVPV 365
E+I EV ++D++ LG+ S + L + D + + +++ PV
Sbjct: 7 EQIRAREVR---LIDQNGDQLGIKSKQEALEIAARRNLD----LVLVAPNAKPPV 54
>d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis
[TaxId: 1423]}
Length = 363
Score = 27.4 bits (60), Expect = 3.4
Identities = 13/67 (19%), Positives = 25/67 (37%), Gaps = 4/67 (5%)
Query: 294 FEGVEKCLLDETLFTVMERIVRAEVHRLVVVDEDDHVLGVLSLSDILVYLVLKPSDDDIG 353
+G+ K LD T + + + + ED G + DI V D +
Sbjct: 278 AKGINKGYLDRAYETTLLKAYQGLIQHKTETSED----GAFLVKDICVGTSAGFYDYYVS 333
Query: 354 VDETSSD 360
+ +++D
Sbjct: 334 RERSTND 340
>d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B
chain, KdpB {Escherichia coli [TaxId: 562]}
Length = 136
Score = 25.4 bits (55), Expect = 7.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 314 VRAEVHRLVVVDEDDHVLGVLSLSDIL 340
V + +VV E VLGV++L DI+
Sbjct: 108 VARQGATPLVVVEGSRVLGVIALKDIV 134
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.138 0.393
Gapped
Lambda K H
0.267 0.0425 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,514,728
Number of extensions: 72455
Number of successful extensions: 297
Number of sequences better than 10.0: 1
Number of HSP's gapped: 261
Number of HSP's successfully gapped: 76
Length of query: 405
Length of database: 2,407,596
Length adjustment: 87
Effective length of query: 318
Effective length of database: 1,213,086
Effective search space: 385761348
Effective search space used: 385761348
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)