Diaphorina citri psyllid: psy7449

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590------
IITLFILRRTSREQSICIDYTSLFRRSKQKHVLHLWPCRIWSMAIEEAFFEAYGRAQNKNTCCICGHVESGAWRLKRHFLKHTGEKSYECCWCTYKTAYENDLKKHQRKHTGEKPYSCGHCPYTARSSSYMLTHLKVHSGEKAFKCEYCSYSSYSKSNLRTHMRTHIGEKPYKCSSCDFQATQKIQVKKHVLIICQHCDQSLFGTTQQLADHCRTCDKMPRPDRSYQYQCYSCEYHSLYSSRMIKHIRNHTGERPFQCKICDSTFKRKQTLDLHIKRHTGERTYKCEFCDYTAARKDTLGVHVRIKHKISICQNCGLILSTITEELLEHCRICSGKERPDSSTDKSFNYVCYTCDYHTGVRECMKKHIRTHTGEKPFKCTHCRYSASRRDTLDHHIQVSHLYKKRFQCPVCDYRCTKKYNLQMHALTKHDLDIKSDGIIQDAGTYILDTALSPEKRVKSRGHETVICHHCRDLLPYKIKDLVSHGELCSGVPRPDGSFRFVCFTCNYHTYKSGHMRQHINGHVGIKPYKCLHCSYKSTQSSCLGRHMRIHTGEKPYACSLCDLKFSQNSQLKYHLTTRHDLPDMSTCLSIECGAKK
cccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccHHHHHcccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccHHHHHccccccccccccccccHcccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccccccccHcccccccccccccccccccccccccccccccc
IITLFILRRTSREQSICIDYTSLFRRSKQKHVLHLWPCRIWSMAIEEAFFEAYGRAQNKNTCCICGHVESGAWRLKRHFLKHTGEKSYECCWCTYKTAYENDLKKHQRKHTGEKPYSCGHCPYTARSSSYMLTHLKVHSGEKAFKCEYCSYSSYSKSNLRTHMRTHIGEKPYKCSSCDFQATQKIQVKKHVLIICQHCDQSLFGTTQQLADHCRTCDKMPRPDRSYQYQCYSCEYHSLYSSRMIKHIRNHTGERPFQCKICDSTFKRKQTLDLHIKRHTGERTYKCEFCDYTAARKDTLGVHVRIKHKISICQNCGLILSTITEELLEHCRICSGKERPDSSTDKSFNYVCYTCDYHTGVRECMKKHIRTHTGEKPFKCTHCRYSASRRDTLDHHIQVSHLYKKRFQCPVCDYRCTKKYNLQMHALTKHDLDIKSDGIIQDAGTYILDTALSPEKRVKSRGHETVICHHCRDLLPYKIKDLVSHGELCSGVPRPDGSFRFVCFTCNYHTYKSGHMRQHINGHVGIKPYKCLHCSYKSTQSSCLGRHMRIHTGEKPYACSLCDLKFSQNSQLKYHLTTRHDLPDMSTCLSIECGAK*
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IITLFILRRTSREQSICIDYTSLFRRSKQKHVLHLWPCRIWSMAIEEAFFEAYGRAQNKNTCCICGHVESGAWRLKRHFLKHTGEKSYECCWCTYKTAYENDLKKHQRKHTGEKPYSCGHCPYTARSSSYMLTHLKVHSGEKAFKCEYCSYSSYSKSNLRTHMRTHIGEKPYKCSSCDFQATQKIQVKKHVLIICQHCDQSLFGTTQQLADHCRTCDKMPRPDRSYQYQCYSCEYHSLYSSRMIKHIRNHTGERPFQCKICDSTFKRKQTLDLHIKRHTGERTYKCEFCDYTAARKDTLGVHVRIKHKISICQNCGLILSTITEELLEHCRICSGKERPDSSTDKSFNYVCYTCDYHTGVRECMKKHIRTHTGEKPFKCTHCRYSASRRDTLDHHIQVSHLYKKRFQCPVCDYRCTKKYNLQMHALTKHDLDIKSDGIIQDAGTYILDTALSPEKRVKSRGHETVICHHCRDLLPYKIKDLVSHGELCSGVPRPDGSFRFVCFTCNYHTYKSGHMRQHINGHVGIKPYKCLHCSYKSTQSSCLGRHMRIHTGEKPYACSLCDLKFSQNSQLKYHLTTRHDLPDMSTCLSIECGAKK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Zinc finger protein 420 May be involved in transcriptional regulation.confidentQ8TAQ5
Zinc finger protein 271 May be involved in transcriptional regulation.confidentQ5R5U3

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0008270 [MF]zinc ion bindingprobableGO:0043169, GO:0046914, GO:0043167, GO:0003674, GO:0005488, GO:0046872
GO:0003676 [MF]nucleic acid bindingprobableGO:0097159, GO:0003674, GO:1901363, GO:0005488
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0048523 [BP]negative regulation of cellular processprobableGO:0008150, GO:0048519, GO:0065007, GO:0050789, GO:0050794

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2I13, chain A
Confidence level:very confident
Coverage over the Query: 358-429,496-578
View the alignment between query and template
View the model in PyMOL
Template: 2I13, chain A
Confidence level:very confident
Coverage over the Query: 97-192,215-278
View the alignment between query and template
View the model in PyMOL
Template: 2DLQ, chain A
Confidence level:very confident
Coverage over the Query: 460-582
View the alignment between query and template
View the model in PyMOL
Template: 1A1I, chain A
Confidence level:probable
Coverage over the Query: 224-305
View the alignment between query and template
View the model in PyMOL