BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7453
(200 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|260792114|ref|XP_002591072.1| hypothetical protein BRAFLDRAFT_69373 [Branchiostoma floridae]
gi|229276272|gb|EEN47083.1| hypothetical protein BRAFLDRAFT_69373 [Branchiostoma floridae]
Length = 921
Score = 63.5 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 44/175 (25%)
Query: 69 TTIPTQNHSLCKHC-------HSQLSHLDLLD-----HCKTCSY--------MIRPNANN 108
T + + +CK C H+ L+HL L C C Y + N
Sbjct: 664 THVEKKTPLVCKKCGYQTIRKHNFLAHLRLHTGEKPFSCGQCDYKTAFKTSLTLHFKTNK 723
Query: 109 TFSP-------FCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFV------------ 149
+ P F CK + T+L + C+TC +++ + K V
Sbjct: 724 SKEPLSCEDCSFSTTCKRAMRTHLKDHTYACKTCDAVLNSKEELQKHVRNHQKEESEKAL 783
Query: 150 -CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL----KKTY 199
C CDY +++ C+ H+R HTGEKP+AC +C++R+ + + L H+ KKT+
Sbjct: 784 RCKVCDYKAFSRPCLEIHMRKHTGEKPFACQECSYRAKAKSTLKIHIANKHKKTF 838
Score = 37.4 bits (85), Expect = 3.2, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 23/77 (29%)
Query: 143 PFRHKFVCYACDYFSYNIGCMRSHIRTH-----------------------TGEKPYACG 179
P KF+C C Y + +R+H++TH TGE+P C
Sbjct: 510 PLEKKFLCKECGYVAKYENELRNHLKTHYEKALLCEECGFKTWVEVEMRAHTGERPLECA 569
Query: 180 QCAFRSASVAGLHYHLK 196
+C FR + + H K
Sbjct: 570 KCCFRISCKVAMREHRK 586
>gi|260810935|ref|XP_002600178.1| hypothetical protein BRAFLDRAFT_66686 [Branchiostoma floridae]
gi|229285464|gb|EEN56190.1| hypothetical protein BRAFLDRAFT_66686 [Branchiostoma floridae]
Length = 1052
Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + CY C+Y + + HI+THTGEKPY CG+C +R+ ++ L H+KK
Sbjct: 474 MRTHTSERPYRCYQCNYSARTKSHLDVHIKTHTGEKPYMCGECGYRATQMSTLRSHMKK 532
Score = 56.2 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY S + + +HI THTGEKPY CG+C +R+ ++ L H+KK
Sbjct: 605 YKCDHCDYSSASKSSLDAHILTHTGEKPYMCGECGYRATQLSTLRSHMKK 654
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + +RSH++ HTGEKPY C QC + +A + L+ H K
Sbjct: 633 YMCGECGYRATQLSTLRSHMKKHTGEKPYKCDQCDYSAAQKSSLYLHKAK 682
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++ FVC C Y + + + H+ THTGEKPY C C + SAS + L H+
Sbjct: 574 KNPFVCGECGYRAPILSGLSRHMMTHTGEKPYKCDHCDYSSASKSSLDAHI 624
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 21/112 (18%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRHK- 147
C C Y + + +Y K T+ E C+ C +S + RH
Sbjct: 854 CDLCDYA---------TAYEVYLKQHKFTHTGEKPHKCKQCDFSSAWRSNLEDHMRRHAG 904
Query: 148 -----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + + H+R+HTGEKPY C +C F +A LH H
Sbjct: 905 QIQKPYMCEECGYRATTKRRLTDHMRSHTGEKPYKCDKCDFSTAHSGSLHSH 956
Score = 44.7 bits (104), Expect = 0.024, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + ++ H THTGEKP+ C QC F SA + L H+++
Sbjct: 852 YACDLCDYATAYEVYLKQHKFTHTGEKPHKCKQCDFSSAWRSNLEDHMRR 901
Score = 42.7 bits (99), Expect = 0.079, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T +S ++ + C CDY + + H H G+KPY C QC +RS + L
Sbjct: 647 TLRSHMKKHTGEKPYKCDQCDYSAAQKSSLYLHKAKHHGDKPYKCKQCGYRSTQRSSLLQ 706
Query: 194 HLKK 197
HL++
Sbjct: 707 HLEE 710
Score = 42.7 bits (99), Expect = 0.081, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 30/51 (58%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++ +VC C Y + N + H++ H + P+ CG+C +R+ ++GL H+
Sbjct: 546 KNPYVCEECGYRTANKHHLSRHMKRHRDKNPFVCGECGYRAPILSGLSRHM 596
Score = 41.2 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + H+RTHT E+PY C QC + + + + L H+K
Sbjct: 455 YMCSECGYGPAAKSTLSIHMRTHTSERPYRCYQCNYSARTKSHLDVHIK 503
Score = 40.8 bits (94), Expect = 0.28, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 25/44 (56%)
Query: 154 DYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
D+ + N H+RTH G K Y CG+C +R+ + L H++K
Sbjct: 257 DFSTANKASPNGHMRTHNGGKTYMCGECGYRATKKSSLMQHMRK 300
Score = 39.3 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 151 YACDYFSYNIGCMRS---HIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
Y CD + RS H+ H G+KPY CG+C +++ + L HL
Sbjct: 769 YKCDQCEFTAARKRSLDIHLLEHEGQKPYICGECGYKTTKKSALSRHL 816
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 15/119 (12%)
Query: 79 CKHCH-SQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKS 137
CK C S +L DH +R +A P+ +T L +H R S
Sbjct: 882 CKQCDFSSAWRSNLEDH-------MRRHAGQIQKPYMCEECGYRATTKRRLTDHMR---S 931
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P++ C CD+ + + G + SH HT +K +AC +C F++ A L H++
Sbjct: 932 HTGEKPYK----CDKCDFSTAHSGSLHSHNLRHTDKKRFACDKCRFKTTVKAYLTKHMR 986
Score = 38.9 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 39/95 (41%), Gaps = 13/95 (13%)
Query: 114 CIYCKAVLSTNLNELIEHC--RTCK-------SMIRTDPFRHK----FVCYACDYFSYNI 160
C Y S+ L L EH ++CK + D H F+C C + +
Sbjct: 694 CGYRSTQRSSLLQHLEEHNGEKSCKRDPPKVSGSTKNDKIAHANEKPFMCGECGLRTTDG 753
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ H++ H GEK Y C QC F +A L HL
Sbjct: 754 SSLAQHMKIHAGEKAYKCDQCEFTAARKRSLDIHL 788
Score = 38.1 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 27/58 (46%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT ++C C Y + + H+R HT KPY C QC + + L +H K
Sbjct: 270 MRTHNGGKTYMCGECGYRATKKSSLMQHMRKHTRGKPYKCDQCDYSAKYKRSLDHHKK 327
Score = 35.8 bits (81), Expect = 9.1, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSH-IRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
I +D R+K C CDY + + +H I HT EKPY C C + + L HL K
Sbjct: 987 IHSDNRRYK--CDHCDYSTARKDNLNNHVIVKHTKEKPYKCDHCGYSTVRKDSLIKHLAK 1044
>gi|391346127|ref|XP_003747330.1| PREDICTED: uncharacterized protein LOC100905253 [Metaseiulus
occidentalis]
Length = 1161
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 44/82 (53%)
Query: 118 KAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA 177
KA+ + N + EH + ++ ++ C C+Y + + +H+RTHT EKP++
Sbjct: 1041 KALKCVHCNYITEHRSYLQRHMKAHAEGKRYQCLECEYRTARSDHLNNHMRTHTSEKPFS 1100
Query: 178 CGQCAFRSASVAGLHYHLKKTY 199
C QC FR A A L+ HL + +
Sbjct: 1101 CNQCDFRCAQQATLYNHLNRRH 1122
>gi|260823036|ref|XP_002603989.1| hypothetical protein BRAFLDRAFT_71723 [Branchiostoma floridae]
gi|229289314|gb|EEN60000.1| hypothetical protein BRAFLDRAFT_71723 [Branchiostoma floridae]
Length = 1004
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/56 (46%), Positives = 32/56 (57%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+RT R F C CDY + + HI THTGEKPY CG+C FR+A + L H
Sbjct: 884 MRTHSGRKPFKCDQCDYCAARKCTLDRHIMTHTGEKPYMCGECGFRTADTSDLSRH 939
Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C+ C Y + + H+RTHTGEKPY C QC + +A + LH HL K
Sbjct: 641 YICWECGYSTACKSHLSQHMRTHTGEKPYKCDQCDYSAAQKSALHAHLAK 690
Score = 53.9 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/93 (36%), Positives = 44/93 (47%), Gaps = 14/93 (15%)
Query: 117 CKAVLS----TNLNELIEHCRTC------KSMIRTDPFRH----KFVCYACDYFSYNIGC 162
CK+ LS T+ E C C KS + +H ++VC C Y + N C
Sbjct: 652 CKSHLSQHMRTHTGEKPYKCDQCDYSAAQKSALHAHLAKHTDGGRYVCDVCGYRAPNKYC 711
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ H+RTHTGEKPY C C F SA L H+
Sbjct: 712 LSRHMRTHTGEKPYKCDHCDFSSARKDDLRKHV 744
Score = 52.8 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 135 CKSMI----RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAG 190
CKS + R+ + C CDY + G + +H+ THTGEKP+ CG+C R+A +
Sbjct: 820 CKSTLIRHMRSHSGEKPYKCDQCDYSAVQKGDLDNHLATHTGEKPFMCGECGHRTARKSN 879
Query: 191 LHYHLK 196
L H++
Sbjct: 880 LSRHMR 885
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y +Y + +H+R H+GEKPY C QC + +A L HL K
Sbjct: 753 FMCVECGYRAYTRSDLSAHMRNHSGEKPYKCEQCDYSAAQKGNLDRHLMK 802
Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + G + H+ HTGEKP+ C +C FR+ + L H++
Sbjct: 781 YKCEQCDYSAAQKGNLDRHLMKHTGEKPFMCDECGFRTPCKSTLIRHMR 829
Score = 45.1 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CD+ S +R H+ HTG+KP+ C +C +R+ + + L H++
Sbjct: 716 MRTHTGEKPYKCDHCDFSSARKDDLRKHVANHTGDKPFMCVECGYRAYTRSDLSAHMR 773
Score = 44.3 bits (103), Expect = 0.030, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + + +RTHTGEKPY C QC + +A L H+
Sbjct: 585 YMCEECGYRATKMFDLSRRMRTHTGEKPYKCDQCDYAAAQKGNLDQHI 632
Score = 42.4 bits (98), Expect = 0.097, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEK-PYACGQCAFRSASVAGLHYHLK 196
++C+ C Y M HI HT EK Y CGQC F +A AGL H++
Sbjct: 328 YICWKCGYRDACKDNMDKHISKHTVEKLHYMCGQCEFTTADKAGLSQHME 377
Score = 41.6 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C + + + H+R+H+GEKPY C QC + + L HL
Sbjct: 809 FMCDECGFRTPCKSTLIRHMRSHSGEKPYKCDQCDYSAVQKGDLDNHL 856
Score = 40.8 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + G + HI EKPY C +C + +A + L H++
Sbjct: 604 MRTHTGEKPYKCDQCDYAAAQKGNLDQHIAAKLSEKPYICWECGYSTACKSHLSQHMR 661
Score = 39.7 bits (91), Expect = 0.77, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C + + + H+RTH+G KP+ C QC + +A L H+
Sbjct: 865 FMCGECGHRTARKSNLSRHMRTHSGRKPFKCDQCDYCAARKCTLDRHI 912
Score = 37.0 bits (84), Expect = 4.1, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 29/64 (45%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T I T ++C C + + + + H THT EKPY C C + +A A L
Sbjct: 907 TLDRHIMTHTGEKPYMCGECGFRTADTSDLSRHKWTHTREKPYKCHLCNYSAAIKARLSK 966
Query: 194 HLKK 197
HL +
Sbjct: 967 HLTR 970
Score = 35.8 bits (81), Expect = 9.4, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 166 HIRTHTGEKPYACGQCAFRSASV 188
H+RTHTGEKP+ C QC + + V
Sbjct: 182 HMRTHTGEKPFKCDQCDYSANMV 204
>gi|444518559|gb|ELV12229.1| Leucine-rich repeat-containing protein 16C [Tupaia chinensis]
Length = 1981
Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 41/125 (32%), Positives = 53/125 (42%), Gaps = 20/125 (16%)
Query: 79 CKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKS 137
C HC + ++ DL H + I C YC AV LI+H ++ K+
Sbjct: 326 CPHCDTVIARKSDLGVHLRKQHSYIEQGKK------CRYCDAVFHERY-ALIQHQKSHKN 378
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHL 195
+F C CDY M H RTHTGEKPYAC C FR + +H+
Sbjct: 379 -------EKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDMHF-- 429
Query: 196 KKTYH 200
K YH
Sbjct: 430 -KRYH 433
>gi|357609802|gb|EHJ66686.1| putative CTCF-like protein [Danaus plexippus]
Length = 671
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 46/97 (47%), Gaps = 16/97 (16%)
Query: 105 NANNTFSP-FCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH----KFVCYACDYFSYN 159
N +N P C YCK+ +T+ EL+ H R +RH C CDY S
Sbjct: 255 NMHNGVKPHVCKYCKSPFTTS-GELVRHVR----------YRHTHEKPHKCSECDYASVE 303
Query: 160 IGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ +R H+R HTGE+PY C C + S L HL+
Sbjct: 304 LSKLRRHVRCHTGERPYQCPHCTYASPDTFKLKRHLR 340
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGL 191
+CK +T F C C Y S + +++H+ HT EKP+AC QC +FR +
Sbjct: 421 SCKIHNKTHEGEKCFKCEMCPYASTTLRHLKTHMLKHTDEKPFACEQCDHSFRQKQLLRR 480
Query: 192 HYHL 195
H +L
Sbjct: 481 HQNL 484
>gi|260813386|ref|XP_002601399.1| hypothetical protein BRAFLDRAFT_103420 [Branchiostoma floridae]
gi|229286694|gb|EEN57411.1| hypothetical protein BRAFLDRAFT_103420 [Branchiostoma floridae]
Length = 1077
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDYF+ + H+RTHTGEKPY CG+C +R+A ++ L H++
Sbjct: 897 MRTHTGEKSYKCDQCDYFAARKSNLDRHLRTHTGEKPYMCGECGYRAAQMSDLSKHMR 954
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDYF+ + H+R H+GEKPY CG+C +R+ + L H++
Sbjct: 841 MRTHTGEKSYKCDQCDYFAARKSNLDRHLRKHSGEKPYMCGECGYRATLKSYLSKHMR 898
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + CY CDY + + H+ HTGEKPY CG+C +R+A L H++
Sbjct: 431 MRTHTGEKPYKCYQCDYSAPQKNHLDLHLLKHTGEKPYMCGECGYRTALKTNLSRHMR 488
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IRT + C CDY + + + +H + HTGEKPY CG+C FR+ + L H++
Sbjct: 319 IRTHTGEKPYKCDQCDYSAADNTTLTNHQKKHTGEKPYMCGECGFRTTRKSILSAHVR 376
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A LH HL K
Sbjct: 580 YMCEECGYRTARNFDLSKHMRTHTGEKPYKCDQCDYSAAQKQHLHSHLAK 629
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + SH+ HTGEKPY CG+C R+A + L H++
Sbjct: 599 MRTHTGEKPYKCDQCDYSAAQKQHLHSHLAKHTGEKPYMCGECGHRAARKSHLMVHMR 656
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY CG+C +R+A + L H++
Sbjct: 375 VRTHTGERPYKCDQCDYSAGQKCDLDKHVVKHTGEKPYMCGECGYRTARKSDLSKHMR 432
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT ++C C Y + + + H+RTHTGEKPY C QC + +A + L H +K
Sbjct: 925 LRTHTGEKPYMCGECGYRAAQMSDLSKHMRTHTGEKPYKCDQCDYSAADQSWLVKHKRK 983
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RT + C CDY + + H++ H+GEKPY CG+C +R++ + L H++
Sbjct: 730 RTHTGEKPYKCDQCDYSAARKSSLDKHLQIHSGEKPYMCGECGYRTSQKSYLSRHMR 786
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+R +++C C Y + + HIRTHTGEKPY C QC + +A L H KK
Sbjct: 291 LRKHTGEKRYMCGECGYRTAYKSDLSKHIRTHTGEKPYKCDQCDYSAADNTTLTNHQKK 349
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 32/63 (50%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T IRT + C CDY + + H H+GEKPY CG+C +R+A A L
Sbjct: 1004 TLAQHIRTHTGEKPYKCDQCDYSAAVKHHLIDHQTRHSGEKPYMCGECGYRAAQRATLSN 1063
Query: 194 HLK 196
H+K
Sbjct: 1064 HMK 1066
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ ++C C Y + + H RTHTGEKPY C QC + +A + L HL+
Sbjct: 707 KKPYICGECGYRTERKSNLSQHTRTHTGEKPYKCDQCDYSAARKSSLDKHLQ 758
Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 32/64 (50%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T + + T + C C + + + H+RTHTGEKPY C QC + +A + L
Sbjct: 510 TLDAHVATHTGEKPYTCEECGHSTTTKSHLSRHMRTHTGEKPYKCDQCDYSAAVKSSLDQ 569
Query: 194 HLKK 197
HL K
Sbjct: 570 HLAK 573
Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 30/59 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+R +++C C Y + + H RTHTGEKPY C QC + +A L H KK
Sbjct: 115 LRKHTGEKRYMCGECGYMTAYKSDLSKHKRTHTGEKPYKCDQCDYSAADNTTLTNHQKK 173
Score = 45.1 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+R H+GEKPY CG+C +R+ + L H++
Sbjct: 785 MRTHTGGKPYKCDQCDYSAAQKPHLDRHLRKHSGEKPYMCGECGYRATLKSYLSKHMR 842
Score = 45.1 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + + + L H +K
Sbjct: 212 YMCVECGYRATQKAHLSRHMRTHTGEKPYKCDQCDYSATQKSTLDRHQRK 261
Score = 45.1 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + H R HTGEKPY C +C +RS L H++
Sbjct: 953 MRTHTGEKPYKCDQCDYSAADQSWLVKHKRKHTGEKPYMCDECGYRSDRKPTLAQHIR 1010
Score = 44.7 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSH-IRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + +H + HTGEKPY CG+C +R+A + L H++
Sbjct: 1 MRTHTGEKPYKCDQCDYSAARKSTLDNHTLAKHTGEKPYMCGECGYRTADRSTLSRHMR 59
Score = 44.7 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTG KPY C QC + +A L HL+K
Sbjct: 766 YMCGECGYRTSQKSYLSRHMRTHTGGKPYKCDQCDYSAAQKPHLDRHLRK 815
Score = 43.5 bits (101), Expect = 0.051, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEK Y C QC + +A + L HL+K
Sbjct: 822 YMCGECGYRATLKSYLSKHMRTHTGEKSYKCDQCDYFAARKSNLDRHLRK 871
Score = 43.1 bits (100), Expect = 0.055, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 24/39 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
++C C Y S + HIRTHTGEKPY C QC + +A
Sbjct: 990 YMCDECGYRSDRKPTLAQHIRTHTGEKPYKCDQCDYSAA 1028
Score = 43.1 bits (100), Expect = 0.070, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 131 HCRTCKSMI----RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
H T KS + RT + C CDY + + H+ HTG+KPY C +C +R+A
Sbjct: 531 HSTTTKSHLSRHMRTHTGEKPYKCDQCDYSAAVKSSLDQHLAKHTGDKPYMCEECGYRTA 590
Query: 187 SVAGLHYHLK 196
L H++
Sbjct: 591 RNFDLSKHMR 600
Score = 43.1 bits (100), Expect = 0.071, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + H+R HTGEK Y CG+C +R+A + L H++
Sbjct: 272 YKCDQCDYSVALKSHLDRHLRKHTGEKRYMCGECGYRTAYKSDLSKHIR 320
Score = 42.7 bits (99), Expect = 0.082, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + +H+RTHTGE+PY C QC + + L H+ K
Sbjct: 356 YMCGECGFRTTRKSILSAHVRTHTGERPYKCDQCDYSAGQKCDLDKHVVK 405
Score = 42.7 bits (99), Expect = 0.082, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + + L HL K
Sbjct: 412 YMCGECGYRTARKSDLSKHMRTHTGEKPYKCYQCDYSAPQKNHLDLHLLK 461
Score = 42.0 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H+RTHTG+KPY C QC + +A L HL K
Sbjct: 636 YMCGECGHRAARKSHLMVHMRTHTGDKPYKCDQCDYSTAQKGMLDQHLMK 685
Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+RTHTGEK Y C QC + +A + L HL+
Sbjct: 878 YMCGECGYRATLKSYLSKHMRTHTGEKSYKCDQCDYFAARKSNLDRHLR 926
Score = 41.6 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + + H+RTHTGE PY C +C + +A L H+
Sbjct: 39 YMCGECGYRTADRSTLSRHMRTHTGENPYKCDRCDYSAAVKCNLDNHI 86
Score = 40.8 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACG---QCAFRSASVAGLHYHL 195
RT + C CDY + + + +H + HTGEKPY CG QC F +A + HL
Sbjct: 144 RTHTGEKPYKCDQCDYSAADNTTLTNHQKKHTGEKPYMCGECDQCDFAAALKVNMDRHL 202
Score = 39.3 bits (90), Expect = 0.94, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+ C CDY + H+R HTGEK Y CG+C + +A + L H K+T+
Sbjct: 96 YKCDQCDYSVALKSHLDRHLRKHTGEKRYMCGECGYMTAYKSDLSKH-KRTH 146
Score = 37.4 bits (85), Expect = 3.1, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLH 192
T +RT + + C CDY + + +HI HT EKPY C QC + A + L
Sbjct: 53 TLSRHMRTHTGENPYKCDRCDYSAAVKCNLDNHIAAKHTDEKPYKCDQCDYSVALKSHLD 112
Query: 193 YHLKK 197
HL+K
Sbjct: 113 RHLRK 117
Score = 36.2 bits (82), Expect = 8.0, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
H+ HTG+KPY CG+C +R+ + L H +
Sbjct: 700 HVVKHTGKKPYICGECGYRTERKSNLSQHTR 730
>gi|391343767|ref|XP_003746177.1| PREDICTED: zinc finger protein 775-like [Metaseiulus occidentalis]
Length = 299
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 43/86 (50%), Gaps = 12/86 (13%)
Query: 112 PFCIYCKAVLSTNL-NELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
P C Y STNL N L H +PF +C C+Y S +R H R H
Sbjct: 44 PSCKYTTHSYSTNLRNHLFGH-------FGANPF----ICGKCNYRSERFDSLRKHCRVH 92
Query: 171 TGEKPYACGQCAFRSASVAGLHYHLK 196
TGE+PYAC C +RS + + LH H++
Sbjct: 93 TGERPYACPICGYRSKTNSNLHAHIR 118
Score = 43.1 bits (100), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Query: 136 KSMIRTDPFRH--------KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSAS 187
KS+ FRH K VC C Y + + HIRTHTGEKP+ C C +R+
Sbjct: 202 KSVGHLAEFRHRESSASGSKHVCNFCGYSTVYKHVLTHHIRTHTGEKPFKCDFCDYRATQ 261
Query: 188 VAGLHYHLKK 197
+ L H+ +
Sbjct: 262 RSNLRKHMDR 271
>gi|355749386|gb|EHH53785.1| Neural-restrictive silencer factor [Macaca fascicularis]
Length = 1095
Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 45/112 (40%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + P+ + K NE + C C + +R
Sbjct: 218 CDRCGY-----NTNRYDPYTAHLKRHTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 272
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 273 RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 324
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 15/114 (13%)
Query: 95 CKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEHCRTCKSMIRTDPFRH 146
C C+Y R + N F C S N ++H +RT
Sbjct: 250 CIICTYTTVSEYHWRKHLRNHFPRKVYTCGKCNYFSDRKNNYVQH-------VRTHTGER 302
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ C C Y S + H+RTH+GEKP+ C QC++ +++ + H ++ ++
Sbjct: 303 PYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEVTRHARQVHN 356
Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 308 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR--- 352
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 353 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 409
Query: 197 KTY 199
+
Sbjct: 410 SKH 412
>gi|432950074|ref|XP_004084376.1| PREDICTED: zinc finger and SCAN domain-containing protein 2-like
[Oryzias latipes]
Length = 473
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
CK C S S + L ++MI F+ C C S H KS
Sbjct: 247 CKECDSSFSQISSLK-----THMITHTGEKPFT--CKECDTSFS--------HISYLKSH 291
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CD I ++SH+RTHTGEKPY+C +C + ++ L H++
Sbjct: 292 MRTHTGEKPFTCKECDSSFSQISSLKSHMRTHTGEKPYSCKECDSSFSRISSLKRHMR 349
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 57/138 (41%), Gaps = 27/138 (19%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYC----------KAVLSTNLNEL 128
CK C + SH+ L S+M F+ C C K+ + T+ E
Sbjct: 275 CKECDTSFSHISYLK-----SHMRTHTGEKPFT--CKECDSSFSQISSLKSHMRTHTGEK 327
Query: 129 IEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAC 178
C+ C K +R F C CD I ++SH+RTHTGEKPY+C
Sbjct: 328 PYSCKECDSSFSRISSLKRHMRIHTGEKPFTCKECDTSFSRISYLKSHMRTHTGEKPYSC 387
Query: 179 GQCAFRSASVAGLHYHLK 196
+C + ++ L H++
Sbjct: 388 KECDSSFSQISSLKSHMR 405
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 17/133 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRP----NANNTFSPFCIYCKAVLSTNLNELIEHCRT 134
CK C S S + L +P + +FS Y K+ + T+ E C+
Sbjct: 331 CKECDSSFSRISSLKRHMRIHTGEKPFTCKECDTSFSRIS-YLKSHMRTHTGEKPYSCKE 389
Query: 135 C----------KSMIRTDPFRHKFVCYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
C KS +RT F C CD FS+ ++ H+RTHTGEKP++C +C
Sbjct: 390 CDSSFSQISSLKSHMRTHTGEKPFTCKECDTSFSHRFS-LKIHMRTHTGEKPFSCKECDS 448
Query: 184 RSASVAGLHYHLK 196
+ ++ L H++
Sbjct: 449 SFSQISSLKSHMR 461
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT F C CD + ++SH+RTHTGEKPY+C +C + ++ L H+
Sbjct: 205 KTHMRTHTGEKPFTCKECDTRFSHKSHLKSHMRTHTGEKPYSCKECDSSFSQISSLKTHM 264
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 50/124 (40%), Gaps = 29/124 (23%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEH------- 131
CK C S S + L S+M +S C C + S ++ L H
Sbjct: 303 CKECDSSFSQISSLK-----SHMRTHTGEKPYS--CKECDSSFS-RISSLKRHMRIHTGE 354
Query: 132 ----CRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA 177
C+ C KS +RT + C CD I ++SH+RTHTGEKP+
Sbjct: 355 KPFTCKECDTSFSRISYLKSHMRTHTGEKPYSCKECDSSFSQISSLKSHMRTHTGEKPFT 414
Query: 178 CGQC 181
C +C
Sbjct: 415 CKEC 418
Score = 42.7 bits (99), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
KS +RT + C CD I +++H+ THTGEKP+ C +C + ++ L H+
Sbjct: 233 KSHMRTHTGEKPYSCKECDSSFSQISSLKTHMITHTGEKPFTCKECDTSFSHISYLKSHM 292
Query: 196 K 196
+
Sbjct: 293 R 293
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CD ++ H+RTHTGEKPY C +C + + L H++
Sbjct: 152 MRTPTGEQPFSCKECDKSFKKKSKLKIHMRTHTGEKPYTCKECDTSFSVKSNLKTHMR 209
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 39/100 (39%), Gaps = 15/100 (15%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
CK C S S + L S+M F+ C C S + I
Sbjct: 387 CKECDSSFSQISSLK-----SHMRTHTGEKPFT--CKECDTSFSHRFSLKIH-------- 431
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAC 178
+RT F C CD I ++SH+RTHTGEK + C
Sbjct: 432 MRTHTGEKPFSCKECDSSFSQISSLKSHMRTHTGEKLFTC 471
>gi|312372817|gb|EFR20694.1| hypothetical protein AND_19652 [Anopheles darlingi]
Length = 1168
Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 105 NANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCM 163
NA+ P C C + +T+ EL+ H R ++ R HK C CDY S + +
Sbjct: 237 NAHTGTKPHRCKRCDSCFTTS-GELVRHVRYRHTLERP----HK--CTECDYSSVELSKL 289
Query: 164 RSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ HIRTHTGEKP+ C C + S L H++
Sbjct: 290 KRHIRTHTGEKPFQCPHCTYASPDKFKLTRHMR 322
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 48/117 (41%), Gaps = 16/117 (13%)
Query: 79 CKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKS 137
CK C S + +L+ H + + RP+ C C S L++L H
Sbjct: 247 CKRCDSCFTTSGELVRHVRYRHTLERPHK-------CTECDYS-SVELSKLKRH------ 292
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
IRT F C C Y S + + H+R HTGEKPY+C C R L H
Sbjct: 293 -IRTHTGEKPFQCPHCTYASPDKFKLTRHMRIHTGEKPYSCDVCFARFTQSNSLKAH 348
Score = 40.4 bits (93), Expect = 0.40, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 8/56 (14%)
Query: 150 CYACDYFSYNIGCMR---SHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKTYH 200
CY CDY Y +R SH+ HT +KP+ C QC FR + H +L YH
Sbjct: 416 CYKCDYCPYASISLRHLESHLLLHTDQKPFQCNQCTQTFRQKQLLKRHINL---YH 468
Score = 36.6 bits (83), Expect = 5.2, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C+Y S + + H+++H+ ++P+ C C ++A L HL
Sbjct: 189 YMCNYCNYTSNKLFLLSRHLKSHSDDRPHKCSVCERGFKTLASLQNHL 236
>gi|260792106|ref|XP_002591068.1| hypothetical protein BRAFLDRAFT_69377 [Branchiostoma floridae]
gi|229276268|gb|EEN47079.1| hypothetical protein BRAFLDRAFT_69377 [Branchiostoma floridae]
Length = 599
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 99 SYMIRPNANNTFSPF-CIYC--KAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDY 155
Y +R + PF C C +A L NL++ + KS RT F C CDY
Sbjct: 258 GYHMRTHTGE--KPFVCEECGYRAALKGNLDKHV-----MKSHRRTHTGDKPFACGQCDY 310
Query: 156 FSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ + H++THTGEKP+AC +C R+A LH H+
Sbjct: 311 MTAEKDSLDKHMKTHTGEKPFACEECGCRAALKGNLHKHV 350
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIG-----CMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
+RT FVC C Y + G M+SH RTHTG+KP+ACGQC + +A L
Sbjct: 261 MRTHTGEKPFVCEECGYRAALKGNLDKHVMKSHRRTHTGDKPFACGQCDYMTAEKDSLDK 320
Query: 194 HLK 196
H+K
Sbjct: 321 HMK 323
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+ C CDY + G + H+RTHTGEKP+ C +C +R+A L H+ K++
Sbjct: 242 YACRLCDYRATQKGSLGYHMRTHTGEKPFVCEECGYRAALKGNLDKHVMKSH 293
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
S R PF C CDY + + H+ THTGE+PYAC +C +R+A A L H +
Sbjct: 537 SHTRDRPFH----CGHCDYKAAKKDTLERHMTTHTGERPYACDKCDYRAAQQATLKQHQE 592
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F+C C Y + M H+R HTG KPYAC C +R+ L YH++
Sbjct: 214 FMCGECGYRAATKSAMDKHVRIHTGVKPYACRLCDYRATQKGSLGYHMR 262
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
S ++T C CD+ + +++H++THT EKP+ CG+C +++A YHLK
Sbjct: 475 SHMKTHAQERPLKCEQCDFSAAWKNSLKAHMKTHTEEKPFKCGECGYKTARK----YHLK 530
Query: 197 K 197
+
Sbjct: 531 R 531
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 152 ACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+C + + +I M +HI TH GEKPY CG+C R+ + + H+K
Sbjct: 17 SCGHRTASITSMDAHIETHVGEKPYMCGECGHRTDRKSAMDNHMK 61
Score = 43.5 bits (101), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 27/34 (79%)
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ +H++THTGEKP+ CG+C +R+A+ + + H++
Sbjct: 201 LNTHMKTHTGEKPFMCGECGYRAATKSAMDKHVR 234
Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 11/80 (13%)
Query: 122 STNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK-----PY 176
+T+ +L H T K+ R +C C + + N G M H++ HT EK PY
Sbjct: 78 ATHKGDLKRHMETHKTKARLS------MCGECGFQTANGGAMTIHMKVHTVEKSRVERPY 131
Query: 177 ACGQCAFRSASVAGLHYHLK 196
AC +C +++AS L H+K
Sbjct: 132 ACEECTYQTASKGDLQTHMK 151
>gi|348523553|ref|XP_003449288.1| PREDICTED: transcriptional repressor CTCF-like [Oreochromis
niloticus]
Length = 831
Score = 57.0 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 42/125 (33%), Positives = 54/125 (43%), Gaps = 20/125 (16%)
Query: 79 CKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKS 137
C HC + ++ DL H + I C YC AV LI+H ++ K+
Sbjct: 496 CPHCDTVIARKSDLGVHLRKQHSFIETGKK------CRYCDAVFHERY-ALIQHQKSHKN 548
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHL 195
+F C CDY M H RTHTGEKPYAC QC FR + +H+
Sbjct: 549 -------EKRFKCDMCDYCCRQERHMVMHRRTHTGEKPYACSQCEKTFRQKQLLDMHF-- 599
Query: 196 KKTYH 200
K YH
Sbjct: 600 -KRYH 603
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 51/120 (42%), Gaps = 17/120 (14%)
Query: 87 SHLDLLDH-CKTCSYMIRP--------NANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
SH D H C C R N + P C C T+ EL+ H R
Sbjct: 344 SHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTS-GELVRHRRYKH 402
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ PF+ C CDY S + ++ HIR+HTGE+P+ C C++ S L H++
Sbjct: 403 T--HEKPFK----CSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMR 456
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 424 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 483
Score = 36.2 bits (82), Expect = 7.4, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 346 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHT 403
Query: 199 Y 199
+
Sbjct: 404 H 404
>gi|260832830|ref|XP_002611360.1| hypothetical protein BRAFLDRAFT_210900 [Branchiostoma floridae]
gi|229296731|gb|EEN67370.1| hypothetical protein BRAFLDRAFT_210900 [Branchiostoma floridae]
Length = 489
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 47/99 (47%), Gaps = 14/99 (14%)
Query: 100 YMIRPNANNTFSPFCIYC--KAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFS 157
+M R + C+ C +AVL TNL+ IRT F C CD+ +
Sbjct: 1 HMRRHTGEKPY--MCVECGYRAVLKTNLDR----------HIRTHTGEKPFKCDQCDFSA 48
Query: 158 YNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ H R HTGEKPY CG+C +R+A + L H+K
Sbjct: 49 AQKSSLDIHQRKHTGEKPYMCGECGYRTAKKSHLSRHMK 87
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H R HTGEKPY CG+C +R A + L H++
Sbjct: 226 MRTHTGEKPYKCDLCDYSAAQKSTLNIHRRKHTGEKPYMCGECGYRMAHKSALSLHMR 283
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CDY + ++ H R HTGEKPY C +C +R+ + L H+K
Sbjct: 95 FKCDLCDYSAAVKSNLKRHRRKHTGEKPYMCDECGYRTVDKSTLSIHIK 143
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + ++ H HTGEKPY CG+C +R+ + L H++
Sbjct: 338 MRTHTGEKPYKCDLCDYSAAVKSNLKRHQLKHTGEKPYMCGECGYRTVEKSALSIHMR 395
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + HIRTHTGEKP+ C QC F +A + L H +K
Sbjct: 11 YMCVECGYRAVLKTNLDRHIRTHTGEKPFKCDQCDFSAAQKSSLDIHQRK 60
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C C + +A + L+ H +K
Sbjct: 422 YMCGECGYRTVEKSALSIHMRTHTGEKPYKCDLCDYSAAGKSALNIHRRK 471
Score = 43.1 bits (100), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C CD+ + + H+RTHTGEKPY C C + +A + L+ H +K
Sbjct: 198 MRTHTGEKPYRCDLCDHSTAQKSNLSQHMRTHTGEKPYKCDLCDYSAAQKSTLNIHRRK 256
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + + L HL K
Sbjct: 263 YMCGECGYRMAHKSALSLHMRTHTGEKPYKCDQCDYSAVQKINLDIHLAK 312
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+RTHTGEKPY C C +A + L H++
Sbjct: 179 YMCGECGYRTVQKSTLSRHMRTHTGEKPYRCDLCDHSTAQKSNLSQHMR 227
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + + + HI+THTGEKPY C C F +A + L+ H
Sbjct: 123 YMCDECGYRTVDKSTLSIHIKTHTGEKPYKCDLCDFSAAVKSNLNRH 169
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KPY CG+C ++ + L H++
Sbjct: 282 MRTHTGEKPYKCDQCDYSAVQKINLDIHLAKHTGDKPYMCGECGYQGIEKSALSIHMR 339
Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
I+T + C CD+ + + H HTGEKPY CG+C +R+ + L H++
Sbjct: 142 IKTHTGEKPYKCDLCDFSAAVKSNLNRHQLKHTGEKPYMCGECGYRTVQKSTLSRHMR 199
Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + H+RTHTGEKPY C C + +A + L H
Sbjct: 319 YMCGECGYQGIEKSALSIHMRTHTGEKPYKCDLCDYSAAVKSNLKRH 365
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 19/68 (27%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYA-------------------CGQCAFRSASV 188
++C C Y + + H+RTHTGEKPY CG+C +R+
Sbjct: 375 YMCGECGYRTVEKSALSIHMRTHTGEKPYKLKSNLKRHQLKHTGEKPYMCGECGYRTVEK 434
Query: 189 AGLHYHLK 196
+ L H++
Sbjct: 435 SALSIHMR 442
Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSAS 187
+RT + C CDY + + H R HT EKPY CG+C + S
Sbjct: 441 MRTHTGEKPYKCDLCDYSAAGKSALNIHRRKHTCEKPYMCGECRLQHCS 489
>gi|260811195|ref|XP_002600308.1| hypothetical protein BRAFLDRAFT_118285 [Branchiostoma floridae]
gi|229285594|gb|EEN56320.1| hypothetical protein BRAFLDRAFT_118285 [Branchiostoma floridae]
Length = 1939
Score = 56.6 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 128 LIEHCRTCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
L E TCKS ++T H + C CDY + G + H+ HTGEKPY C +CAF
Sbjct: 617 LCEFKTTCKSSLKTHMANHTGEKPYKCDQCDYSAAQKGHLDRHMAKHTGEKPYMCSECAF 676
Query: 184 RSASVAGLHYHLKK 197
R+A + H+K+
Sbjct: 677 RTADRTTISRHMKQ 690
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
IRT + C CDY S + H+ HTGEKPY CG+C +R+A + L H+++
Sbjct: 1176 IRTHTGEKPYKCDQCDYSSAFKSGLNRHMTKHTGEKPYMCGECGYRTARRSTLTVHMRE 1234
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+R + C CDY + + H+ HTGEKPY CGQC FR+A+ + L H++K
Sbjct: 29 LRNHAGEKPYKCDQCDYVAAWKKNLDQHMTKHTGEKPYKCGQCEFRAAAKSNLVRHMRK 87
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
T PF+ C C Y + + HIRTHTGEKPY C QC + SA +GL+ H+ K
Sbjct: 1154 TKPFK----CGECGYRATVRFHLSEHIRTHTGEKPYKCDQCDYSSAFKSGLNRHMTK 1206
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C + + N C+ SH+ THTGE+PY C QC F + LH H
Sbjct: 725 YLCEKCGFRTTNRFCLSSHMTTHTGERPYKCDQCDFAAGCKGTLHRH 771
Score = 49.3 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C + + + + SH+RTHTGEKPY C QC + +A A L H+
Sbjct: 94 YMCEKCGFMAAKMSDLSSHMRTHTGEKPYKCDQCDYSAARKAHLDEHM 141
Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C + + N C+ +H+ THTGE+PY C QC F + L H
Sbjct: 1568 YLCEKCGFRTANSFCLSNHMTTHTGERPYKCDQCDFAAGQKPTLQRH 1614
Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C++ + N M H+RTH+GEKPY C C + +A + L H+ K
Sbjct: 927 YKCEECEFRTDNRSKMSEHVRTHSGEKPYKCDLCDYSAARKSTLDQHMTK 976
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+F+C C Y + + H+R HTGE+PY C QC + +A L+ H+
Sbjct: 1686 RFMCEKCGYMAAKKSDLSRHMRKHTGERPYKCDQCDYSAAQKDTLNRHI 1734
Score = 45.1 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 53/134 (39%), Gaps = 17/134 (12%)
Query: 79 CKHCHSQLSHLDLLD-----HCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCR 133
C C LLD H Y+ T + FC+ ++T+ E C
Sbjct: 1542 CDQCDYSALRKCLLDQHMAKHTGEKPYLCEKCGFRTANSFCL--SNHMTTHTGERPYKCD 1599
Query: 134 TC------KSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
C K ++ RH ++ C C+Y + + H+R HTGEKPY C C +
Sbjct: 1600 QCDFAAGQKPTLQRHKLRHTGEKRYKCGECEYRTITRSNLSVHMRQHTGEKPYKCEHCDY 1659
Query: 184 RSASVAGLHYHLKK 197
+A L+ H+ K
Sbjct: 1660 SAAQKGLLNQHMAK 1673
Score = 45.1 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY S + H+ HTG+KPY CG+C +R+A+ L H++K
Sbjct: 294 YKCDQCDYSSAWKKSLVLHMSHHTGKKPYKCGECEYRTAAKHDLVRHMRK 343
Score = 45.1 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+VC C Y + + + H+R HTGEKPY C C + +A L H KK
Sbjct: 1887 YVCEECGYGTVSKSHLTIHLRKHTGEKPYKCDMCDYSAAHANSLKLHKKK 1936
Score = 43.9 bits (102), Expect = 0.038, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C++ + G + H+R H GEKPY C QC + +A L H+ K
Sbjct: 10 YTCGECEFRTATKGNLTKHLRNHAGEKPYKCDQCDYVAAWKKNLDQHMTK 59
Score = 43.5 bits (101), Expect = 0.042, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C CDY + + H+ HTGEKPY C +C FR+A+ L H+
Sbjct: 1540 YKCDQCDYSALRKCLLDQHMAKHTGEKPYLCEKCGFRTANSFCLSNHM 1587
Score = 43.5 bits (101), Expect = 0.042, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
K+ C CD+ + + H+R HTGEKPY C C + +A L HL+K
Sbjct: 1802 KYKCEECDFRTDGKFKLTEHVRKHTGEKPYKCNICDYSAAWKLSLAAHLRK 1852
Score = 43.1 bits (100), Expect = 0.056, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C+ + H+ THTGE+PY C +C +++A +GL H+K+
Sbjct: 1484 YKCGHCNISFKQKKSLDRHLATHTGERPYTCNKCEYKTADKSGLSQHMKQ 1533
Score = 43.1 bits (100), Expect = 0.070, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C++ + + H+R HTGEKPY C +C F +A ++ L H++
Sbjct: 66 YKCGQCEFRAAAKSNLVRHMRKHTGEKPYMCEKCGFMAAKMSDLSSHMR 114
Score = 42.7 bits (99), Expect = 0.089, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C++ S + H+ HTGEKP+ CG+C +R+ + + L H++K
Sbjct: 1270 YKCDQCEFSSVWKKSLDLHMARHTGEKPFMCGECEYRTVARSDLAKHMRK 1319
Score = 42.4 bits (98), Expect = 0.097, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
RT P+ +C C + + ++ + H++ HTGEKPY C QC + SA L H+
Sbjct: 262 RTKPY----MCGECGHRTVSMSDLSQHMKKHTGEKPYKCDQCDYSSAWKKSLVLHM 313
Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C+Y + + + H++ HTGEKPY C QC + + L H+ K
Sbjct: 1512 YTCNKCEYKTADKSGLSQHMKQHTGEKPYKCDQCDYSALRKCLLDQHMAK 1561
Score = 42.0 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C CDY + + H+ HTGEKPY C +C FR+ + L H+
Sbjct: 697 YKCDQCDYSTLRKCLLDQHMAKHTGEKPYLCEKCGFRTTNRFCLSSHM 744
Score = 42.0 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C++ + +++H+ HTGEKPY C QC + +A L H+ K
Sbjct: 613 YNCGLCEFKTTCKSSLKTHMANHTGEKPYKCDQCDYSAAQKGHLDRHMAK 662
Score = 42.0 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 148 FVCYACDYFSYNIGCMRSH-IRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY S +R H + H+GEKPY C QC F S L H+ +
Sbjct: 1241 YKCDQCDYSSARKNHLRKHAVEKHSGEKPYKCDQCEFSSVWKKSLDLHMAR 1291
Score = 41.6 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + + H+R HTG+KPY C QC + SA L H
Sbjct: 1213 YMCGECGYRTARRSTLTVHMREHTGQKPYKCDQCDYSSARKNHLRKH 1259
Score = 41.6 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
C CDY + + H+ HTGEK YAC +C FR+A + + H+
Sbjct: 811 CDLCDYSAALKKTINRHMTKHTGEKLYACKECGFRTADRSSISRHM 856
Score = 41.2 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 29/59 (49%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+R + C CDY + + +H+R HTGEKPY C C + +A L H+ K
Sbjct: 1822 VRKHTGEKPYKCNICDYSAAWKLSLAAHLRKHTGEKPYKCDLCDYSAAVKRRLDQHMTK 1880
Score = 41.2 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 135 CKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAG 190
CK + RH + C C+Y + + H+R HTGEKP+ C C + +A
Sbjct: 764 CKGTLHRHKLRHTGEKRHKCEKCEYRTTTRSNLSVHMRQHTGEKPHKCDLCDYSAALKKT 823
Query: 191 LHYHLKK 197
++ H+ K
Sbjct: 824 INRHMTK 830
Score = 40.8 bits (94), Expect = 0.30, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 20/27 (74%)
Query: 170 HTGEKPYACGQCAFRSASVAGLHYHLK 196
HTGEKPY CG+C FR+A+ L HL+
Sbjct: 4 HTGEKPYTCGECEFRTATKGNLTKHLR 30
Score = 40.8 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 40/102 (39%), Gaps = 16/102 (15%)
Query: 105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFR-----HK------FVCYAC 153
NA +T F + +V T E C + PFR HK + C C
Sbjct: 1407 NAAHTAGAFPVDAGSVHKTT-----EKSYNCDECDFSSPFRRNLNLHKAKHTKPYKCSEC 1461
Query: 154 DYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+Y + + H+R HTGE+PY CG C L HL
Sbjct: 1462 EYRTAYRSALSLHMRNHTGERPYKCGHCNISFKQKKSLDRHL 1503
Score = 40.8 bits (94), Expect = 0.34, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C+Y + + H+R HTG++P+ C QC + SA L H+
Sbjct: 1298 FMCGECEYRTVARSDLAKHMRKHTGDRPHKCEQCDYSSAPNDDLRKHM 1345
Score = 40.0 bits (92), Expect = 0.51, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C CDY + + H+ HTG +PY C +C + + + L H +K
Sbjct: 946 VRTHSGEKPYKCDLCDYSAARKSTLDQHMTKHTGARPYVCEECGYGTVKKSHLTIHRRK 1004
Score = 40.0 bits (92), Expect = 0.53, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 151 YACDYFSYNIG---CMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
Y CD + + +G + H TH GEK Y C QC FR+A L H+
Sbjct: 557 YKCDQYDFAVGHKTSLDRHKLTHAGEKRYNCSQCEFRTAYKCSLKIHV 604
Score = 39.7 bits (91), Expect = 0.61, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYA-------CGQCAFRSASVAGLHYHLKK 197
+ C CDY + G + H+ HTGE+PY C +C + +A + L H++K
Sbjct: 1652 YKCEHCDYSAAQKGLLNQHMAKHTGERPYVYRECRFMCEKCGYMAAKKSDLSRHMRK 1708
Score = 38.9 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + + H++ HTGE+PY C QC + + L H+ K
Sbjct: 669 YMCSECAFRTADRTTISRHMKQHTGERPYKCDQCDYSTLRKCLLDQHMAK 718
Score = 38.5 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CDY S +R H+ H GE P+ CG+C + + + L H+KK
Sbjct: 352 CDQCDYSSACKNNLRKHMFKH-GETPFLCGECGYMAGDRSDLSKHMKK 398
Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ + C C+Y + + H+R HTG++P+ C QC + SA L H+ K
Sbjct: 319 KKPYKCGECEYRTAAKHDLVRHMRKHTGKRPHKCDQCDYSSACKNNLRKHMFK 371
Score = 37.7 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++ + C CDY + + +H+R HTGEK Y C C + +A L+ H+
Sbjct: 1742 KNIYKCEECDYRTDGRYKLSAHVRKHTGEKLYKCDLCDYSAALRKALNRHI 1792
Score = 37.7 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 151 YACDYFSYNIGCMR---SHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
Y CD Y+ R H+ HTG PY C +C + + S + L HL+K
Sbjct: 1859 YKCDLCDYSAAVKRRLDQHMTKHTGMSPYVCEECGYGTVSKSHLTIHLRK 1908
Score = 36.6 bits (83), Expect = 5.9, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEK--PYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + HI THTGEK Y C +C FR+ L H++K
Sbjct: 1773 YKCDLCDYSAALRKALNRHILTHTGEKNGKYKCEECDFRTDGKFKLTEHVRK 1824
Score = 36.6 bits (83), Expect = 6.0, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 46/121 (38%), Gaps = 10/121 (8%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+HC + LL+ RP C C ++ ++L H
Sbjct: 1654 CEHCDYSAAQKGLLNQHMAKHTGERPYVYRECRFMCEKC-GYMAAKKSDLSRH------- 1705
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKP--YACGQCAFRSASVAGLHYHLK 196
+R + C CDY + + HI THT EK Y C +C +R+ L H++
Sbjct: 1706 MRKHTGERPYKCDQCDYSAAQKDTLNRHISTHTVEKKNIYKCEECDYRTDGRYKLSAHVR 1765
Query: 197 K 197
K
Sbjct: 1766 K 1766
Score = 36.6 bits (83), Expect = 6.6, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C + + + + H+ HTG KPY C +C + + + L H++K
Sbjct: 837 YACKECGFRTADRSSISRHMTIHTGVKPYMCEKCGYMAPCRSELSRHMQK 886
>gi|348509710|ref|XP_003442390.1| PREDICTED: transcriptional repressor CTCF-like [Oreochromis
niloticus]
Length = 773
Score = 56.6 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 42/125 (33%), Positives = 54/125 (43%), Gaps = 20/125 (16%)
Query: 79 CKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKS 137
C HC + ++ DL H + I C YC AV LI+H +T K+
Sbjct: 489 CPHCDTVIARKSDLGVHLRKQHSFIETGKK------CRYCDAVFHERY-ALIQHQKTHKN 541
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHL 195
+F C CDY M H RTHTGEKP+AC QC FR + +H+
Sbjct: 542 -------EKRFKCDQCDYCCRQERHMIMHKRTHTGEKPFACSQCDKTFRQKQLLDMHF-- 592
Query: 196 KKTYH 200
K YH
Sbjct: 593 -KRYH 596
Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 383 TSGELVRHRRYKHTHEKPFKCSMCDYSSVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 442
Query: 190 GLHYHLK 196
L H++
Sbjct: 443 KLKRHMR 449
Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 417 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 476
Score = 36.2 bits (82), Expect = 8.1, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 339 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHT 396
Query: 199 Y 199
+
Sbjct: 397 H 397
>gi|18146803|dbj|BAB82460.1| neural-restrictive silencer factor nrsf/rest [Mus musculus]
Length = 1082
Score = 56.6 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 45/112 (40%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K L NE I C C + +R
Sbjct: 213 CDRCGY-----NTNRYDHYMAHLKHHLRAGENERIYKCIICTYTTVSEYHWRKHLRNHFP 267
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 268 RKVYTCSKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 319
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 15/114 (13%)
Query: 95 CKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEHCRTCKSMIRTDPFRH 146
C C+Y R + N F C S N ++H +RT
Sbjct: 245 CIICTYTTVSEYHWRKHLRNHFPRKVYTCSKCNYFSDRKNNYVQH-------VRTHTGER 297
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ C C Y S + H+RTH+GEKP+ C QC + +++ + H ++ ++
Sbjct: 298 PYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCNYVASNQHEVTRHARQVHN 351
Score = 40.8 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 303 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCNYV-ASNQHEVTRHAR--- 347
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 348 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 404
Query: 197 KTY 199
+
Sbjct: 405 SKH 407
>gi|148705985|gb|EDL37932.1| RE1-silencing transcription factor [Mus musculus]
Length = 1082
Score = 56.6 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 45/112 (40%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K L NE I C C + +R
Sbjct: 213 CDRCGY-----NTNRYDHYMAHLKHHLRAGENERIYKCIICTYTTVSEYHWRKHLRNHFP 267
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 268 RKVYTCSKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 319
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 15/114 (13%)
Query: 95 CKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEHCRTCKSMIRTDPFRH 146
C C+Y R + N F C S N ++H +RT
Sbjct: 245 CIICTYTTVSEYHWRKHLRNHFPRKVYTCSKCNYFSDRKNNYVQH-------VRTHTGER 297
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ C C Y S + H+RTH+GEKP+ C QC + +++ + H ++ ++
Sbjct: 298 PYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCNYVASNQHEVTRHARQVHN 351
Score = 40.8 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 303 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCNYV-ASNQHEVTRHAR--- 347
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 348 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 404
Query: 197 KTY 199
+
Sbjct: 405 SKH 407
>gi|254675343|ref|NP_035393.2| RE1-silencing transcription factor [Mus musculus]
gi|341941963|sp|Q8VIG1.2|REST_MOUSE RecName: Full=RE1-silencing transcription factor; AltName:
Full=Neural-restrictive silencer factor
gi|117558671|gb|AAI27066.1| RE1-silencing transcription factor [Mus musculus]
Length = 1082
Score = 56.6 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 45/112 (40%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K L NE I C C + +R
Sbjct: 213 CDRCGY-----NTNRYDHYMAHLKHHLRAGENERIYKCIICTYTTVSEYHWRKHLRNHFP 267
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 268 RKVYTCSKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 319
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 15/114 (13%)
Query: 95 CKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEHCRTCKSMIRTDPFRH 146
C C+Y R + N F C S N ++H +RT
Sbjct: 245 CIICTYTTVSEYHWRKHLRNHFPRKVYTCSKCNYFSDRKNNYVQH-------VRTHTGER 297
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ C C Y S + H+RTH+GEKP+ C QC + +++ + H ++ ++
Sbjct: 298 PYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCNYVASNQHEVTRHARQVHN 351
Score = 40.8 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 303 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCNYV-ASNQHEVTRHAR--- 347
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 348 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 404
Query: 197 KTY 199
+
Sbjct: 405 SKH 407
>gi|13929116|ref|NP_113976.1| RE1-silencing transcription factor [Rattus norvegicus]
gi|81908377|sp|O54963.1|REST_RAT RecName: Full=RE1-silencing transcription factor; AltName:
Full=Neural-restrictive silencer factor
gi|2746326|gb|AAB94893.1| zinc finger transcription factor REST protein [Rattus norvegicus]
Length = 1069
Score = 56.6 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 45/112 (40%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K L NE + C C + +R
Sbjct: 217 CDRCGY-----NTNRYDHYTAHLKHHLRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 271
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 272 RKVYTCSKCNYFSTEKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 323
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 48/114 (42%), Gaps = 15/114 (13%)
Query: 95 CKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEHCRTCKSMIRTDPFRH 146
C C+Y R + N F C ST N ++H +RT
Sbjct: 249 CIICTYTTVSEYHWRKHLRNHFPRKVYTCSKCNYFSTEKNNYVQH-------VRTHTGER 301
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ C C Y S + H+RTH+GEKP+ C QC + +++ + H ++ ++
Sbjct: 302 PYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCNYVASNQHEVTRHARQVHN 355
Score = 40.8 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 307 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCNYV-ASNQHEVTRHAR--- 351
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 352 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 408
Query: 197 KTY 199
+
Sbjct: 409 SKH 411
>gi|260823020|ref|XP_002603981.1| hypothetical protein BRAFLDRAFT_71731 [Branchiostoma floridae]
gi|229289306|gb|EEN59992.1| hypothetical protein BRAFLDRAFT_71731 [Branchiostoma floridae]
Length = 305
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + + C CDY + N + H+R HTGEKPY CG+C +R+A + L H+K
Sbjct: 215 MRTHTGKRPYRCDQCDYSAANKFDLDKHVRKHTGEKPYMCGECGYRAAQRSTLSRHMK 272
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H RTHTGEKPY C QC + +A + L+ HL K
Sbjct: 84 YMCGDCGYRTAKKSHLSQHTRTHTGEKPYKCDQCVYSAAGKSALNQHLAK 133
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RT + C C Y + + H+ HTGEKPY CG C + +A + L H++
Sbjct: 103 TRTHTGEKPYKCDQCVYSAAGKSALNQHLAKHTGEKPYMCGDCGYMTAYKSDLAKHMR 160
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + + H+R HTGEKPY C QC + +A + L+ H
Sbjct: 140 YMCGDCGYMTAYKSDLAKHMRIHTGEKPYKCDQCDYSAAVKSHLNQH 186
Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + H+RTHTG++PY C QC + +A+ L H++K
Sbjct: 196 YMCENCGYRVAQKCDLSRHMRTHTGKRPYRCDQCDYSAANKFDLDKHVRK 245
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G M H+ TGEKPY CG C +R+A + L H +
Sbjct: 69 GNMGRHVVKQTGEKPYMCGDCGYRTAKKSHLSQHTR 104
Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
+R ++C C Y + + H++THTGEKPY QC +
Sbjct: 243 VRKHTGEKPYMCGECGYRAAQRSTLSRHMKTHTGEKPYKLDQCDY 287
>gi|427795365|gb|JAA63134.1| Putative transcriptional repressor ctcf, partial [Rhipicephalus
pulchellus]
Length = 916
Score = 56.2 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C C A +T+ EL+ H R + P R C CDY S + ++ H+R HTGE
Sbjct: 429 CKECDAAFTTS-GELVRHVRYRHT--HEKPHR----CTECDYASVELSKLKRHMRCHTGE 481
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
+PY C C + S L HL+
Sbjct: 482 RPYQCPHCTYASPDTYKLKRHLR 504
Score = 37.7 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGL 191
T K +++ F C C Y S + + SH+ HT +KP+ C +C AFR +
Sbjct: 584 TYKVHVKSHEGEKCFKCDLCPYASISQRHLESHMLIHTDQKPFRCDECDQAFRQKQLLKR 643
Query: 192 HYHLKKTYH 200
H K YH
Sbjct: 644 H---KNLYH 649
>gi|332021814|gb|EGI62160.1| Transcriptional repressor CTCF [Acromyrmex echinatior]
Length = 731
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 15/87 (17%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRT 169
C YC++ +T+ EL+ H R +RH C+ CDY S + ++ HIR
Sbjct: 298 CKYCESAFTTS-GELVRHVR----------YRHTHEKPHKCHECDYASVELSKLKRHIRC 346
Query: 170 HTGEKPYACGQCAFRSASVAGLHYHLK 196
HTGE+PY C C + S L HL+
Sbjct: 347 HTGERPYQCPHCTYASPDTFKLKRHLR 373
>gi|47230373|emb|CAF99566.1| unnamed protein product [Tetraodon nigroviridis]
Length = 814
Score = 56.2 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 43/89 (48%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H +T K+ +F C CDY M H RTHTGE
Sbjct: 476 CRYCDAVFHERY-ALIQHQKTHKN-------EKRFKCDQCDYCCRQERHMIMHKRTHTGE 527
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KP+AC QC FR + +H+ K YH
Sbjct: 528 KPFACSQCEKTFRQKQLLDMHF---KRYH 553
Score = 52.8 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 340 TSGELVRHRRYKHTHEKPFKCSMCDYSSVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 399
Query: 190 GLHYHLK 196
L H++
Sbjct: 400 KLKRHMR 406
Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 374 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 433
Score = 36.2 bits (82), Expect = 8.4, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 296 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHT 353
Query: 199 Y 199
+
Sbjct: 354 H 354
>gi|410913241|ref|XP_003970097.1| PREDICTED: transcriptional repressor CTCF-like [Takifugu rubripes]
Length = 760
Score = 56.2 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 43/89 (48%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H +T K+ +F C CDY M H RTHTGE
Sbjct: 476 CRYCDAVFHERY-ALIQHQKTHKN-------EKRFKCDQCDYCCRQERHMIMHKRTHTGE 527
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KP+AC QC FR + +H+ K YH
Sbjct: 528 KPFACSQCEKTFRQKQLLDMHF---KRYH 553
Score = 52.8 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 340 TSGELVRHRRYKHTHEKPFKCSMCDYSSVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 399
Query: 190 GLHYHLK 196
L H++
Sbjct: 400 KLKRHMR 406
Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 374 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 433
Score = 36.2 bits (82), Expect = 8.4, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 296 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHT 353
Query: 199 Y 199
+
Sbjct: 354 H 354
>gi|74186662|dbj|BAB23689.3| unnamed protein product [Mus musculus]
Length = 853
Score = 56.2 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 45/112 (40%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K L NE I C C + +R
Sbjct: 213 CDRCGY-----NTNRYDHYMAHLKHHLRAGENERIYKCIICTYTTVSEYHWRKHLRNHFP 267
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 268 RKVYTCSKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 319
Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 15/114 (13%)
Query: 95 CKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEHCRTCKSMIRTDPFRH 146
C C+Y R + N F C S N ++H +RT
Sbjct: 245 CIICTYTTVSEYHWRKHLRNHFPRKVYTCSKCNYFSDRKNNYVQH-------VRTHTGER 297
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ C C Y S + H+RTH+GEKP+ C QC + +++ + H ++ ++
Sbjct: 298 PYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCNYVASNQHEVTRHARQVHN 351
Score = 40.4 bits (93), Expect = 0.40, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 303 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCNYV-ASNQHEVTRHAR--- 347
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 348 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 404
Query: 197 KTY 199
+
Sbjct: 405 SKH 407
>gi|427788693|gb|JAA59798.1| Putative transcriptional repressor ctcf [Rhipicephalus pulchellus]
Length = 875
Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C C A +T+ EL+ H R + P R C CDY S + ++ H+R HTGE
Sbjct: 388 CKECDAAFTTS-GELVRHVRYRHT--HEKPHR----CTECDYASVELSKLKRHMRCHTGE 440
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
+PY C C + S L HL+
Sbjct: 441 RPYQCPHCTYASPDTYKLKRHLR 463
Score = 37.4 bits (85), Expect = 3.2, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGL 191
T K +++ F C C Y S + + SH+ HT +KP+ C +C AFR +
Sbjct: 543 TYKVHVKSHEGEKCFKCDLCPYASISQRHLESHMLIHTDQKPFRCDECDQAFRQKQLLKR 602
Query: 192 HYHLKKTYH 200
H K YH
Sbjct: 603 H---KNLYH 608
>gi|49227649|ref|NP_001001844.1| transcriptional repressor CTCF [Danio rerio]
gi|47132309|gb|AAT11782.1| CCCTC-binding factor [Danio rerio]
gi|190337802|gb|AAI63935.1| CCCTC-binding factor (zinc finger protein) [Danio rerio]
gi|190338626|gb|AAI63931.1| CCCTC-binding factor (zinc finger protein) [Danio rerio]
Length = 798
Score = 55.8 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 43/89 (48%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 509 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMVMHKRTHTGE 560
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC QC FR + +H+ + YH
Sbjct: 561 KPYACSQCEKTFRQKQLLDMHF---RRYH 586
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 51/120 (42%), Gaps = 17/120 (14%)
Query: 87 SHLDLLDH-CKTCSYMIRP--------NANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
SH D H C C R N + P C C T+ EL+ H R
Sbjct: 327 SHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTS-GELVRHRRYKH 385
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ PF+ C CDY S + ++ HIR+HTGE+P+ C C++ S L H++
Sbjct: 386 T--HEKPFK----CSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMR 439
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 407 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 466
Score = 36.2 bits (82), Expect = 7.5, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 329 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHT 386
Query: 199 Y 199
+
Sbjct: 387 H 387
>gi|391334118|ref|XP_003741455.1| PREDICTED: uncharacterized protein LOC100905908 [Metaseiulus
occidentalis]
Length = 789
Score = 55.8 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C C A +T+ EL+ H R + P R C CDY S + ++ H+R HTGE
Sbjct: 341 CKECDASFTTS-GELVRHVRYKHT--HEKPHR----CTECDYASVELSKLKRHMRCHTGE 393
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
+PY C C + S L HL+
Sbjct: 394 RPYQCPHCTYASPDTYKLQRHLR 416
Score = 37.0 bits (84), Expect = 4.3, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 54/139 (38%), Gaps = 20/139 (14%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCR--TCK 136
C CH++ + + L K +P P K L ++ +L R CK
Sbjct: 426 CDICHARFTQSNSLRAHKLIHTGQKPVFQCELCPATCGRKTDLRIHVQKLHTSDRPLKCK 485
Query: 137 SMIRTDPFRHKF----------VCYACDYFSYNIGCMR---SHIRTHTGEKPYACGQC-- 181
++ P R+ + C+ CD SY R SH+ H+ +KP+ C +C
Sbjct: 486 RCGKSFPDRYTYRVHAKSHEGEKCFKCDLCSYASISQRHLESHMLIHSDQKPFQCDECDQ 545
Query: 182 AFRSASVAGLHYHLKKTYH 200
AFR + H K YH
Sbjct: 546 AFRQKQLLKRH---KNLYH 561
>gi|260823046|ref|XP_002603994.1| hypothetical protein BRAFLDRAFT_71717 [Branchiostoma floridae]
gi|229289319|gb|EEN60005.1| hypothetical protein BRAFLDRAFT_71717 [Branchiostoma floridae]
Length = 517
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT ++ C CDY + G + H+ THTGEKPY CG+C +R+A + L H++
Sbjct: 401 MRTHTGERRYKCDQCDYSAMQKGDLDKHLATHTGEKPYMCGECGYRTARKSNLSRHMR 458
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + F C CDY + + H+ THTGEKP+ CG+C + +A + L H++
Sbjct: 457 MRTHSGKKPFKCNQCDYSAAQKCTLDRHVMTHTGEKPFMCGECGYGTADRSKLSRHMR 514
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 52/119 (43%), Gaps = 17/119 (14%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLST-NLNELIEHCRTCKS 137
C HC LDH ++ + + N + C C V ST N+L H
Sbjct: 103 CDHCDYSAVQKSSLDH-----HLAKHSGNKPY--MCGQC--VYSTARKNDLSVH------ 147
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IR + C C Y + + H+ THTGEKPY CG+C FR+A + L H++
Sbjct: 148 -IRIHTGDKPYKCDQCSYSAAVKSTLDQHLTTHTGEKPYMCGECGFRAAQKSNLSRHMR 205
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C+Y + + H +TH+GEKPY CG+C +R+A + L H+K
Sbjct: 204 MRTHTGDKPYKCDQCEYSAVKKHHLIGHQKTHSGEKPYMCGECGYRTADRSTLSRHMK 261
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + + H++ H+GEKPY CG+C +R+A L H++
Sbjct: 241 YMCGECGYRTADRSTLSRHMKIHSGEKPYMCGECGYRAAYKYNLSQHMR 289
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 6/53 (11%)
Query: 148 FVCYACDY---FSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + YN+ H+RTHTG+KPY C QC + +A + L HL K
Sbjct: 269 YMCGECGYRAAYKYNLS---QHMRTHTGQKPYKCDQCNYSAAQKSSLDQHLMK 318
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + + C C+Y + + H+ HTGEKPY CG+C R+ + + L H++
Sbjct: 288 MRTHTGQKPYKCDQCNYSAAQKSSLDQHLMKHTGEKPYMCGECGHRTTTKSDLSRHMR 345
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + ++RTHTGEKPY C C + + + L +HL K
Sbjct: 73 YMCGECGYRTSQRSKLSRYMRTHTGEKPYKCDHCDYSAVQKSSLDHHLAK 122
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ H+G KPY CGQC + +A L H++
Sbjct: 92 MRTHTGEKPYKCDHCDYSAVQKSSLDHHLAKHSGNKPYMCGQCVYSTARKNDLSVHIR 149
Score = 39.7 bits (91), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGE+ Y C QC + + L HL
Sbjct: 382 YMCGECGYRTAGRSTLSRHMRTHTGERRYKCDQCDYSAMQKGDLDKHL 429
Score = 39.7 bits (91), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 18/101 (17%)
Query: 114 CIYCKAVLSTNLNELIEH-------CRTC--KSMIRTDPFRH--------KFVCYACDYF 156
C Y A S+ L++H C C ++ ++D RH + C CDY
Sbjct: 302 CNYSAAQKSSLDQHLMKHTGEKPYMCGECGHRTTTKSDLSRHMRIHTGEKPYKCDQCDYS 361
Query: 157 SYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
+ +HI HT EKPY CG+C +R+A + L H++
Sbjct: 362 AAQKVNFDAHIAAKHTSEKPYMCGECGYRTAGRSTLSRHMR 402
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTH+G+KP+ C QC + +A L H+
Sbjct: 438 YMCGECGYRTARKSNLSRHMRTHSGKKPFKCNQCDYSAAQKCTLDRHV 485
Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G M H+ HTG+KPY CG+C +R++ + L +++
Sbjct: 58 GNMGRHVVKHTGDKPYMCGECGYRTSQRSKLSRYMR 93
>gi|354478557|ref|XP_003501481.1| PREDICTED: transcriptional repressor CTCFL [Cricetulus griseus]
gi|344254906|gb|EGW11010.1| Transcriptional repressor CTCFL [Cricetulus griseus]
Length = 665
Score = 55.8 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC A LI+H R+ K+ KF C CDY C+++H+RTHTGE
Sbjct: 471 CRYCPAGFHERY-ALIQHQRSHKN-------EKKFKCKQCDYACKQERCLKAHVRTHTGE 522
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTYH 200
KP++C C+ L HL+K YH
Sbjct: 523 KPFSCLDCSKHFRQKQLLTVHLRK-YH 548
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ HIR+HTGE+P+ C QC + S
Sbjct: 335 TSGELVRHRRYKHTHEKPFKCSICKYASVEASKLKRHIRSHTGERPFQCCQCTYASKDTY 394
Query: 190 GLHYHLK 196
L H++
Sbjct: 395 KLKRHMR 401
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 369 KRHIRSHTGERPFQCCQCTYASKDTYKLKRHMRTHSGEKPYECPTCHARFTQSGTMKIHV 428
Query: 196 KKTY 199
+ +
Sbjct: 429 AQKH 432
Score = 38.1 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKTY 199
+C+ C + +R+H+ THTG +PY CG C AF ++ H K T+
Sbjct: 297 LCHLCLKGFRTVTLLRNHVNTHTGTRPYKCGDCGMAFVTSGELVRHRRYKHTH 349
>gi|260810939|ref|XP_002600180.1| hypothetical protein BRAFLDRAFT_66688 [Branchiostoma floridae]
gi|229285466|gb|EEN56192.1| hypothetical protein BRAFLDRAFT_66688 [Branchiostoma floridae]
Length = 3220
Score = 55.8 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C CDY + N+ +R+H+R HTGEKPY C QC F +S L H
Sbjct: 2692 YMCGQCDYSTTNLANLRTHVRKHTGEKPYKCDQCDFSCSSTGSLKRH 2738
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT F C+ C+Y + G +++H+ HTG+KPY CGQC + + + L H++K
Sbjct: 1374 MRTHTGEKPFKCHLCEYSAAEKGSLKNHLAQHTGDKPYMCGQCGYSTTHLGSLRTHMRK 1432
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C+ C+Y + G +++H+ HTG+KPY CGQC + + ++A L H++K
Sbjct: 2655 MRTHTDEKPYKCHLCEYSAAEKGNLKNHLAQHTGDKPYMCGQCDYSTTNLANLRTHVRK 2713
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + ++G +R+H+R HTGEKPY C QC F ++ L H
Sbjct: 403 YMCGQCGYSTTHLGSLRTHVRKHTGEKPYKCDQCDFSCSTSGSLKRH 449
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C+ C+Y + G +++H+ HTG+KPY CGQC + + + L H++K
Sbjct: 366 MRTHTGEKPYKCHLCEYSAAEKGNLKNHLAQHTGDKPYMCGQCGYSTTHLGSLRTHVRK 424
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + ++G +R+H+R HTGEKPY C QC + S S L H
Sbjct: 1411 YMCGQCGYSTTHLGSLRTHMRKHTGEKPYKCDQCDYSSTSSRNLKRH 1457
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + G + H+ H+GEKPYACG+C +R+A + L HL+
Sbjct: 2353 YKCDQCDYSAAQKGTLDQHMVIHSGEKPYACGECGYRTARNSDLLKHLR 2401
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+F C CD+ + + + H+R HTGEKPY C QC + +A L H+ K
Sbjct: 1071 RFACMECDFRASSKQGLSRHVRKHTGEKPYKCNQCEYAAAQKCSLDRHMDK 1121
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+ C CD+ + + H+ HTGEKP+ CG+C FR+ ++ L H+KK +
Sbjct: 3164 YKCDQCDFSALQKAQLTQHMVKHTGEKPFLCGECGFRTGYMSNLSAHMKKKH 3215
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C Y + + H+RTHTGEKPY C QC F ++S + HL
Sbjct: 786 FMCGECGYKTVERSDLSRHMRTHTGEKPYKCDQCEFSASSKCSFNQHL 833
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C Y + + H+RTHTGEKPY C QC F ++S + HL
Sbjct: 1781 FMCGECGYKTVERSDLSRHMRTHTGEKPYKCDQCEFSASSKCSFNQHL 1828
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C+ C+Y + +++H+ HTG+KPY CGQC + + + L H++K
Sbjct: 919 MRTHTGEKPYKCHLCEYSAAEKVSLKNHLAQHTGDKPYMCGQCDYSTTYLGSLRTHVRK 977
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C+ C+Y + +++H+ HTG+KPY CGQC + + + L H++K
Sbjct: 1914 MRTHTGEKPYKCHLCEYSAAEKVSLKNHLAQHTGDKPYMCGQCDYSTTYLGSLRTHVRK 1972
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
K+ C CDY + C+ H+ H GEKP+AC +C FR+A + L H++
Sbjct: 2551 KYKCDECDYSTARKDCLGQHLLRHRGEKPHACSECEFRTAHKSYLTTHMR 2600
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 10/72 (13%)
Query: 124 NLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
+L E E CR KS F C CD+ + + + HIR HTGEKPY C C +
Sbjct: 1540 DLTENTEKCRVNKS----------FACMECDFKASSRQDLSRHIRKHTGEKPYKCDHCDY 1589
Query: 184 RSASVAGLHYHL 195
+A L H+
Sbjct: 1590 AAAQKTTLDRHI 1601
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
K+ C CDY + GC+ H H EKPY C QC +R+A L H++
Sbjct: 262 KYKCDECDYRTARRGCLVQHAIRHQSEKPYTCSQCEYRTARKQDLTSHMR 311
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
S +R + C CDY + ++ H+R H+G++PY CG+C +R+A L H++
Sbjct: 308 SHMRIHSGEKPYKCDQCDYSTSWKTHLKRHMRKHSGDRPYMCGECGYRAAQKVSLSRHMR 367
Score = 47.0 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 9/72 (12%)
Query: 124 NLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
+L E E CR KS C CD+ + + + HIR HTGEKPY CG C +
Sbjct: 544 DLTENTEKCRVNKSFAS---------CMECDFRASSKQDLSRHIRKHTGEKPYKCGHCDY 594
Query: 184 RSASVAGLHYHL 195
+A L H+
Sbjct: 595 AAALKTTLDRHI 606
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 122 STNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
+ N + L+EH +RT F C CDY S + H+ H GEKPY CG+C
Sbjct: 2950 TANRSNLLEH-------MRTHTGEKPFKCDQCDYSSAKKNNLDRHMFEHAGEKPYMCGEC 3002
Query: 182 AFRSASVAGLHYHLK 196
+ +A+ L H K
Sbjct: 3003 GYSTANRTHLLDHAK 3017
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+C C Y + N + H+RTHTGEKPY C +C + SA + L H+
Sbjct: 2112 MCGKCGYRTGNRAHLFEHMRTHTGEKPYKCDKCGYSSAKKSNLDRHM 2158
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F C CD+ + + + HIR HTGEKPY C QC + +A + L H+
Sbjct: 91 FACSDCDFRASSKCFLLRHIRKHTGEKPYKCDQCDYAAAQKSSLDKHI 138
Score = 45.8 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
K+ C CDY + C+ H+ H GEKPY C QC +R+ + L H++
Sbjct: 1270 KYKCDECDYRTARKDCLGQHLLRHRGEKPYTCPQCEYRTIHKSCLTAHMQ 1319
Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C+Y + + H+ HTGEKPY CG+C +R+ + L H++
Sbjct: 2456 MRTHTGEKPYKCDQCEYSASRKNHLDRHMAKHTGEKPYMCGECGYRTVERSHLSRHMR 2513
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 144 FRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
RH+ + C C+Y + + C+ +H++ H+GEKPY C QC + ++ L H+ K
Sbjct: 1291 LRHRGEKPYTCPQCEYRTIHKSCLTAHMQIHSGEKPYKCDQCDYSTSWKTHLKRHMLK 1348
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 130 EHCRTCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
++C K+++R +H ++C C Y + + H+RTHT EKPY C C + +
Sbjct: 2614 DYCTPWKTLLRRHMLKHTGDRAYMCGECGYRAAQKVSLSRHMRTHTDEKPYKCHLCEYSA 2673
Query: 186 ASVAGLHYHLKK 197
A L HL +
Sbjct: 2674 AEKGNLKNHLAQ 2685
Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + +H+RTHTGEKPY C QC + ++ L H+ K
Sbjct: 2437 YMCGECGYRTIVRSSLATHMRTHTGEKPYKCDQCEYSASRKNHLDRHMAK 2486
Score = 45.1 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+Y + + H HTGEKPY CG+C +R+A + L H+ K
Sbjct: 2297 FKCDKCEYSTAKKWHLNQHKLRHTGEKPYMCGECGYRTADRSHLSRHIVK 2346
Score = 44.7 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C+Y + + H+ HTGEKPY CG+C +R+ + L H++
Sbjct: 1184 FKCDQCEYSATQKKNLDRHMAKHTGEKPYMCGECGYRTTMRSDLSRHIR 1232
Score = 44.7 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + ++ H+ HTG++PY CG+C +R+A L H++
Sbjct: 1327 YKCDQCDYSTSWKTHLKRHMLKHTGDRPYMCGECGYRAAQKVSLSRHMR 1375
Score = 44.7 bits (104), Expect = 0.023, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C+Y + + SH+R H+GEKPY C QC + ++ L H++K
Sbjct: 291 YTCSQCEYRTARKQDLTSHMRIHSGEKPYKCDQCDYSTSWKTHLKRHMRK 340
Score = 44.3 bits (103), Expect = 0.027, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + H+ HTGEKPY C QC + +A L H+ K
Sbjct: 730 YKCDQCDYSAAQKNSLDRHMAKHTGEKPYKCDQCKYSAAQKKTLDRHMAK 779
Score = 44.3 bits (103), Expect = 0.027, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + H+ HTGEKPY C QC + +A L H+ K
Sbjct: 1725 YKCDQCDYSAAQKNSLDRHMAKHTGEKPYKCDQCKYSAAQKKTLDRHMAK 1774
Score = 44.3 bits (103), Expect = 0.027, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+R + C C+Y + + H+ HTGEKP+ C +C FR+A + L H++K
Sbjct: 1091 VRKHTGEKPYKCNQCEYAAAQKCSLDRHMDKHTGEKPFMCDECGFRAAIRSRLSLHMRK 1149
Score = 44.3 bits (103), Expect = 0.030, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGEKPY C QC + ++ L HL
Sbjct: 2493 YMCGECGYRTVERSHLSRHMRTHTGEKPYKCDQCEYSASRKNHLDRHL 2540
Score = 44.3 bits (103), Expect = 0.032, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + H+ HTGEKPY C QC + +A L H+ K
Sbjct: 702 YKCDQCDYSAAQKNSLDRHMAKHTGEKPYKCDQCDYSAAQKNSLDRHMAK 751
Score = 44.3 bits (103), Expect = 0.032, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + H+ HTGEKPY C QC + +A L H+ K
Sbjct: 1697 YKCDQCDYSAAQKNSLDRHMAKHTGEKPYKCDQCDYSAAQKNSLDRHMAK 1746
Score = 43.9 bits (102), Expect = 0.033, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+C C + + N + H+RTHTGEKP+ C QC + SA L H+
Sbjct: 2942 MCGECGFRTANRSNLLEHMRTHTGEKPFKCDQCDYSSAKKNNLDRHM 2988
Score = 43.5 bits (101), Expect = 0.042, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C Y + + + H+R HTGEKPY C QC + +A L H+ K
Sbjct: 674 FTCGECGYSTGDRFRLSLHMRKHTGEKPYKCDQCDYSAAQKNSLDRHMAK 723
Score = 43.5 bits (101), Expect = 0.042, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C Y + + + H+R HTGEKPY C QC + +A L H+ K
Sbjct: 1669 FTCGECGYSTGDRFRLSLHMRKHTGEKPYKCDQCDYSAAQKNSLDRHMAK 1718
Score = 43.5 bits (101), Expect = 0.045, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 30/62 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +R ++C C Y + + H+RTHTGEKPY C C + +A L HL
Sbjct: 335 KRHMRKHSGDRPYMCGECGYRAAQKVSLSRHMRTHTGEKPYKCHLCEYSAAEKGNLKNHL 394
Query: 196 KK 197
+
Sbjct: 395 AQ 396
Score = 43.1 bits (100), Expect = 0.059, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C C + +A L HL +
Sbjct: 900 YMCGECGYRAAQKISLSRHMRTHTGEKPYKCHLCEYSAAEKVSLKNHLAQ 949
Score = 43.1 bits (100), Expect = 0.059, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C C + +A L HL +
Sbjct: 1895 YMCGECGYRAAQKISLSRHMRTHTGEKPYKCHLCEYSAAEKVSLKNHLAQ 1944
Score = 43.1 bits (100), Expect = 0.062, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + +R H+ HTG++ Y CG+C +R+A L H++
Sbjct: 2608 YKCDQCDYCTPWKTLLRRHMLKHTGDRAYMCGECGYRAAQKVSLSRHMR 2656
Score = 42.7 bits (99), Expect = 0.088, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C Y + + H+R HTGE+PY C QC + + A L HL K
Sbjct: 2381 YACGECGYRTARNSDLLKHLRIHTGERPYRCDQCDYSAGWKANLDRHLAK 2430
Score = 42.7 bits (99), Expect = 0.092, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 143 PFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C CDY + + H+ HTG+KPY CG+C +R+ + L H++
Sbjct: 2408 PYR----CDQCDYSAGWKANLDRHLAKHTGDKPYMCGECGYRTIVRSSLATHMR 2457
Score = 42.4 bits (98), Expect = 0.094, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + +H+R HTGEKP+ C QC + + L H+ K
Sbjct: 1156 YKCDHCDYSAALKTSLVNHMRKHTGEKPFKCDQCEYSATQKKNLDRHMAK 1205
Score = 42.4 bits (98), Expect = 0.095, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 10/76 (13%)
Query: 129 IEHCRTCKSMIRTDP------FRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYAC 178
I C C P F+H + C+ CD+ S + H+ HTGEK Y C
Sbjct: 3079 IHKCDQCDYSTSRKPNLDRHMFKHSGGKPYRCHLCDHSSAEKSDLDQHMAKHTGEKSYMC 3138
Query: 179 GQCAFRSASVAGLHYH 194
+C FR+A + L H
Sbjct: 3139 EECGFRTAYRSSLSVH 3154
Score = 42.4 bits (98), Expect = 0.097, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 153 CDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
CDY + + + H+ HTG +PY CG+C +R+A L H++
Sbjct: 877 CDYVTSSKFNLDRHVLKHTGNRPYMCGECGYRAAQKISLSRHMR 920
Score = 42.4 bits (98), Expect = 0.097, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 153 CDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
CDY + + + H+ HTG +PY CG+C +R+A L H++
Sbjct: 1872 CDYVTSSKFNLDRHVLKHTGNRPYMCGECGYRAAQKISLSRHMR 1915
Score = 42.4 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C+Y + + H+ HTGEKPY C +C +R+A + L H+ K
Sbjct: 176 YKCDQCEYSATQKRNLDRHMAKHTGEKPYICEECGYRTADRSHLSRHMVK 225
Score = 42.4 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKP+ C C + +A L HL +
Sbjct: 1355 YMCGECGYRAAQKVSLSRHMRTHTGEKPFKCHLCEYSAAEKGSLKNHLAQ 1404
Score = 42.0 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 153 CDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
CD+ S++ + H+ THTGEKP+ CG+C +R+ + A L H++
Sbjct: 2089 CDFSSFSYKNVM-HMATHTGEKPHMCGKCGYRTGNRAHLFEHMR 2131
Score = 42.0 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + + HI HTGEKPY C QC + +A L H+
Sbjct: 2325 YMCGECGYRTADRSHLSRHIVKHTGEKPYKCDQCDYSAAQKGTLDQHM 2372
Score = 41.2 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C Y + + H+ HTGEKP+ CG+C +++ + L H++
Sbjct: 758 YKCDQCKYSAAQKKTLDRHMAKHTGEKPFMCGECGYKTVERSDLSRHMR 806
Score = 41.2 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C Y + + H+ HTGEKP+ CG+C +++ + L H++
Sbjct: 1753 YKCDQCKYSAAQKKTLDRHMAKHTGEKPFMCGECGYKTVERSDLSRHMR 1801
Score = 40.4 bits (93), Expect = 0.36, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C + + + H+R HTGEKPY C QC + +A L H+ K
Sbjct: 616 YKCEECGFRTAYRSSLILHMRKHTGEKPYKCDQCEYSAAQKNSLDRHMVK 665
Score = 40.4 bits (93), Expect = 0.36, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C + + + H+R HTGEKPY C QC + +A L H+ K
Sbjct: 1611 YKCEECGFRTAYRSSLILHMRKHTGEKPYKCDQCEYSAAQKNSLDRHMVK 1660
Score = 40.0 bits (92), Expect = 0.47, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 10/75 (13%)
Query: 132 CRTC--KSMIRTDPFRH--------KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
C C K++ R+D RH + C C++ + + H+ H GEKPY C +C
Sbjct: 788 CGECGYKTVERSDLSRHMRTHTGEKPYKCDQCEFSASSKCSFNQHLLRHRGEKPYTCSEC 847
Query: 182 AFRSASVAGLHYHLK 196
FR+ + L H++
Sbjct: 848 EFRTLHKSCLTVHMR 862
Score = 40.0 bits (92), Expect = 0.47, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 10/75 (13%)
Query: 132 CRTC--KSMIRTDPFRH--------KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
C C K++ R+D RH + C C++ + + H+ H GEKPY C +C
Sbjct: 1783 CGECGYKTVERSDLSRHMRTHTGEKPYKCDQCEFSASSKCSFNQHLLRHRGEKPYTCSEC 1842
Query: 182 AFRSASVAGLHYHLK 196
FR+ + L H++
Sbjct: 1843 EFRTLHKSCLTVHMR 1857
Score = 40.0 bits (92), Expect = 0.50, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C + + + H+R HTGEKPY C C + +A L H++K
Sbjct: 1128 FMCDECGFRAAIRSRLSLHMRKHTGEKPYKCDHCDYSAALKTSLVNHMRK 1177
Score = 40.0 bits (92), Expect = 0.52, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
++C C Y + + + H+ HTGEKPY C QC + ++ YHL + +
Sbjct: 204 YICEECGYRTADRSHLSRHMVKHTGEKPYKCDQCEYSTSR----KYHLDRHF 251
Score = 40.0 bits (92), Expect = 0.55, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + HIRTHTGEK Y C QC + ++ YHL +
Sbjct: 1212 YMCGECGYRTTMRSDLSRHIRTHTGEKTYKCDQCKYSTSH----KYHLDR 1257
Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHI-RTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
IR + C CDY + + HI H+GEK Y C +C FR+A + L H++K
Sbjct: 578 IRKHTGEKPYKCGHCDYAAALKTTLDRHIVAKHSGEKSYKCEECGFRTAYRSSLILHMRK 637
Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C C++ + + + +H+R H+GEKPY C QC + + L H+ K
Sbjct: 2582 CSECEFRTAHKSYLTTHMRIHSGEKPYKCDQCDYCTPWKTLLRRHMLK 2629
Score = 37.4 bits (85), Expect = 3.4, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 110 FSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRT 169
+ P+ ++ + + L H T + P+R C CD+ S + H+
Sbjct: 2882 YEPYVCSEPGLMKADWSHLSNHTAT---RVGEKPYR----CDYCDFSSAYKNNLVLHMAK 2934
Query: 170 HTGEKPYACGQCAFRSASVAGLHYHLK 196
HTG++ CG+C FR+A+ + L H++
Sbjct: 2935 HTGDRLCMCGECGFRTANRSNLLEHMR 2961
Score = 37.0 bits (84), Expect = 5.0, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEK--PYACGQCAFRSASVAGLHYHLKK 197
+ C C+Y + + H+ HTGEK P+ CG+C + + L H++K
Sbjct: 644 YKCDQCEYSAAQKNSLDRHMVKHTGEKEKPFTCGECGYSTGDRFRLSLHMRK 695
Score = 37.0 bits (84), Expect = 5.0, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEK--PYACGQCAFRSASVAGLHYHLKK 197
+ C C+Y + + H+ HTGEK P+ CG+C + + L H++K
Sbjct: 1639 YKCDQCEYSAAQKNSLDRHMVKHTGEKEKPFTCGECGYSTGDRFRLSLHMRK 1690
>gi|149035172|gb|EDL89876.1| RE1-silencing transcription factor [Rattus norvegicus]
Length = 1048
Score = 55.8 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 45/112 (40%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K L NE + C C + +R
Sbjct: 196 CDRCGY-----NTNRYDHYTAHLKHHLRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 250
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 251 RKVYTCSKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 302
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 15/114 (13%)
Query: 95 CKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEHCRTCKSMIRTDPFRH 146
C C+Y R + N F C S N ++H +RT
Sbjct: 228 CIICTYTTVSEYHWRKHLRNHFPRKVYTCSKCNYFSDRKNNYVQH-------VRTHTGER 280
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ C C Y S + H+RTH+GEKP+ C QC + +++ + H ++ ++
Sbjct: 281 PYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCNYVASNQHEVTRHARQVHN 334
Score = 40.8 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 286 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCNYV-ASNQHEVTRHAR--- 330
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 331 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 387
Query: 197 KTY 199
+
Sbjct: 388 SKH 390
>gi|345495056|ref|XP_001606075.2| PREDICTED: transcriptional repressor CTCFL-like [Nasonia
vitripennis]
Length = 709
Score = 55.8 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C +C + +T+ EL+ H R T HK C CDY S + ++ HIR HTGE
Sbjct: 277 CKFCDSAFTTS-GELVRHVR----YRHTHEKPHK--CNDCDYASVELSKLKRHIRCHTGE 329
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
+PY C C + S L HL+
Sbjct: 330 RPYQCPHCTYASPDTFKLKRHLR 352
Score = 37.4 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 18/81 (22%)
Query: 135 CKSMIRTDPFRHKFV----------CYACD---YFSYNIGCMRSHIRTHTGEKPYACGQC 181
CK +T P R+ + CY CD Y S + + SH+ HT +KPY C C
Sbjct: 421 CKRCGKTFPDRYSYKLHSKTHEGEKCYKCDLCPYASISARHLESHMLIHTDQKPYQCDHC 480
Query: 182 --AFRSASVAGLHYHLKKTYH 200
+FR + H +L YH
Sbjct: 481 YQSFRQKQLLKRHCNL---YH 498
>gi|260786903|ref|XP_002588496.1| hypothetical protein BRAFLDRAFT_194472 [Branchiostoma floridae]
gi|229273658|gb|EEN44507.1| hypothetical protein BRAFLDRAFT_194472 [Branchiostoma floridae]
Length = 457
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIR-THTGEKPYACGQCAFRSASVAGLHYHLKK 197
RT + C CDY + + C+++H+R THTGEKPY C +C FR+AS A L H +K
Sbjct: 306 RTHTGEKPYKCDQCDYSAAQLPCLKNHVRRTHTGEKPYLCEECGFRTASQASLTKHKRK 364
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + G + SH+RTHTGEKPY C QC F +A + L H++
Sbjct: 133 MRTHTGERPYKCDQCDYSASEKGHLSSHMRTHTGEKPYKCDQCDFSAAQSSLLTKHVR 190
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + SH+RTHTGEKPY C QC F SA L H++
Sbjct: 371 YLCNECGYRARESSSLSSHMRTHTGEKPYKCDQCDFSSAQSTSLKTHVR 419
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F+C C Y + + +H RTHTGEKPY C QC F +A ++ L H++
Sbjct: 57 FLCDECGYRTRESSALSTHKRTHTGEKPYKCDQCDFAAAQISHLKKHVR 105
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
FVC C Y++ + + +H+RTHTGE+PY C QC + ++ L H++
Sbjct: 114 FVCNECGYWTADKTTLTNHMRTHTGERPYKCDQCDYSASEKGHLSSHMR 162
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 9/56 (16%)
Query: 148 FVCYACDY------FSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY FSY + H RTHTGEKPY CG C +R+A + H +K
Sbjct: 227 YKCDQCDYAASEKDFSYELN---QHKRTHTGEKPYLCGDCGYRTAHRSSFTRHQRK 279
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
++C C Y + + H RTHTGEKPY C QC + +A + L H+++T+
Sbjct: 286 YLCDECGYRARESSYLSIHKRTHTGEKPYKCDQCDYSAAQLPCLKNHVRRTH 337
Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C+Y++ N +H+R HTGE+PY C QC + +AS Y L
Sbjct: 199 FMCNECEYWTDNRTNFLTHLRKHTGERPYKCDQCDY-AASEKDFSYEL 245
Score = 42.7 bits (99), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RT ++C C + + + + H R HTGEKPY C +C +R+ + L H++
Sbjct: 335 RTHTGEKPYLCEECGFRTASQASLTKHKRKHTGEKPYLCNECGYRARESSSLSSHMR 391
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C++ + + + H RTH EKPY CG+C +R+A + H +K
Sbjct: 1 YTCKLCEFKTADKETLSEHKRTHAEEKPYLCGECGYRTAHSSSFTRHKRK 50
Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RT ++C C Y + + H R HTGEKP+ C +C +R+ + L H +
Sbjct: 21 RTHAEEKPYLCGECGYRTAHSSSFTRHKRKHTGEKPFLCDECGYRTRESSALSTHKR 77
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIR-THTGEKPYACGQCAFRSASVAGLHYHLK 196
RT + C CD+ + I ++ H+R H GEKP+ C +C + +A L H++
Sbjct: 77 RTHTGEKPYKCDQCDFAAAQISHLKKHVRVKHNGEKPFVCNECGYWTADKTTLTNHMR 134
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RT ++C C Y + + H R HTG+KPY C +C +R+ + L H +
Sbjct: 250 RTHTGEKPYLCGDCGYRTAHRSSFTRHQRKHTGKKPYLCDECGYRARESSYLSIHKR 306
Score = 36.2 bits (82), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIR-THTGEKPYACGQCAFRSASVAGLHYHL 195
S +RT + C CD+ S +++H+R H GEKP+ C +C + + + H+
Sbjct: 388 SHMRTHTGEKPYKCDQCDFSSAQSTSLKTHVRVKHKGEKPFVCNECEYWTDNRTTFLNHM 447
Query: 196 KK 197
+K
Sbjct: 448 RK 449
>gi|260822996|ref|XP_002603969.1| hypothetical protein BRAFLDRAFT_71743 [Branchiostoma floridae]
gi|229289294|gb|EEN59980.1| hypothetical protein BRAFLDRAFT_71743 [Branchiostoma floridae]
Length = 662
Score = 55.8 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 17/100 (17%)
Query: 114 CIYCKAVLSTNLNELIEH-------CRTC----------KSMIRTDPFRHKFVCYACDYF 156
C Y A ST +I+H C+ C +RT F C CDY
Sbjct: 499 CDYSAAQKSTLDQHVIKHSGEQPYMCKMCGYRTAKKSHLSRHMRTHTGERPFKCDQCDYS 558
Query: 157 SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ + + H+ THTGEKPY CG+C FR+ + L H++
Sbjct: 559 AAHKSTLDEHVTTHTGEKPYMCGECGFRATRKSELSRHMR 598
Score = 52.8 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C Y A S+ L H R +F+C C Y S + +H+RTHTG+
Sbjct: 415 CDYSAARKSSLDQHLANHTR-----------EQRFMCGECGYRSAQKSNLSTHMRTHTGD 463
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
KPY C QC +R+A + L H++
Sbjct: 464 KPYKCDQCGYRTAWKSHLSQHMR 486
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + C CDY + + H+RTHTG+KPY C QC + +A + L HL
Sbjct: 373 MRTHTKDRPYKCDQCDYSAAQKFDLSKHMRTHTGDKPYKCDQCDYSAARKSSLDQHL 429
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 31/65 (47%)
Query: 131 HCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAG 190
H T + T ++C C + + + H+RTHTGEKPY C QC + +A
Sbjct: 561 HKSTLDEHVTTHTGEKPYMCGECGFRATRKSELSRHMRTHTGEKPYKCDQCDYSAARKCT 620
Query: 191 LHYHL 195
L HL
Sbjct: 621 LDEHL 625
Score = 45.8 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 47/118 (39%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C C +H LD T +P C C +T +EL H RT
Sbjct: 552 CDQCDYSAAHKSTLDEHVTTHTGEKPY-------MCGEC-GFRATRKSELSRHMRTHTG- 602
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P++ C CDY + + H+ HTGEKP CG+C +R+ + H++
Sbjct: 603 --EKPYK----CDQCDYSAARKCTLDEHLTIHTGEKPNMCGECGYRTTRKSNFSRHMR 654
Score = 45.8 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C C Y + + H+RTHTGEKPY C QC + +A + L H+ K
Sbjct: 457 MRTHTGDKPYKCDQCGYRTAWKSHLSQHMRTHTGEKPYKCDQCDYSAAQKSTLDQHVIK 515
Score = 45.1 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ H+GE+PY C C +R+A + L H++
Sbjct: 485 MRTHTGEKPYKCDQCDYSAAQKSTLDQHVIKHSGEQPYMCKMCGYRTAKKSHLSRHMR 542
Score = 43.5 bits (101), Expect = 0.044, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ H+ THTGEKP+ CG+C +R+A + L+ H++
Sbjct: 107 LDKHLATHTGEKPFMCGECGYRTARKSTLYKHMR 140
Score = 43.5 bits (101), Expect = 0.049, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C Y + + H+RTH GEKP+ C +C + +A L HL
Sbjct: 120 FMCGECGYRTARKSTLYKHMRTHPGEKPFTCDRCDYSAAQKCTLDRHL 167
Score = 43.1 bits (100), Expect = 0.068, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HT E+ + CG+C +RSA + L H++
Sbjct: 401 MRTHTGDKPYKCDQCDYSAARKSSLDQHLANHTREQRFMCGECGYRSAQKSNLSTHMR 458
Score = 40.4 bits (93), Expect = 0.37, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G M H+ H GEKPY CG+C R+A + L H++
Sbjct: 339 GNMGRHVVKHAGEKPYKCGECEHRAAQKSDLSRHMR 374
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C++ + + H+RTHT ++PY C QC + +A L H++
Sbjct: 354 YKCGECEHRAAQKSDLSRHMRTHTKDRPYKCDQCDYSAAQKFDLSKHMR 402
>gi|260791351|ref|XP_002590703.1| hypothetical protein BRAFLDRAFT_89507 [Branchiostoma floridae]
gi|229275899|gb|EEN46714.1| hypothetical protein BRAFLDRAFT_89507 [Branchiostoma floridae]
Length = 151
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKT 198
++C C Y S G + H+RTHTGEKPY C QC + +A + L YHL T
Sbjct: 85 YICGECGYRSAYKGNLSKHMRTHTGEKPYKCDQCDYSAADKSALGYHLANT 135
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + ++ H+ HTGEKPY CG+C +RSA L H++
Sbjct: 57 YKCDQCDYSAAQKASLKQHLVIHTGEKPYICGECGYRSAYKGNLSKHMR 105
Score = 36.6 bits (83), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ SH TH EKPY C QC + +A A L HL
Sbjct: 44 LDSHPETHIAEKPYKCDQCDYSAAQKASLKQHL 76
>gi|224049595|ref|XP_002195893.1| PREDICTED: RE1-silencing transcription factor-like [Taeniopygia
guttata]
Length = 893
Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 43/112 (38%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C K +R
Sbjct: 219 CDRCGY-----NTNRYDHYLAHLKHHNKAGENERVYKCTICTYTTVSEYHWKKHLRNHFP 273
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C YFS HIRTHTGE+PY C C + S+ L H++
Sbjct: 274 RKVYTCSECSYFSDRKNNYIQHIRTHTGERPYQCAMCPYSSSQKTHLTRHMR 325
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCK--AVLSTNLNELIEH 131
KH H++ + + C C+Y + + N F C + S N I+H
Sbjct: 237 KH-HNKAGENERVYKCTICTYTTVSEYHWKKHLRNHFPRKVYTCSECSYFSDRKNNYIQH 295
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
IRT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 296 -------IRTHTGERPYQCAMCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 348
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 349 TRHARQVHN 357
Score = 40.4 bits (93), Expect = 0.45, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 19/124 (15%)
Query: 77 SLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTC 135
++C + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 308 AMCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR-- 353
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ P +C C+Y + + + H+ H + + C C + ++ L YH+
Sbjct: 354 --QVHNGP--KPLICPHCNYKTADRSNFKKHVELHINPRQFLCPVCDYAASKKCNLQYHI 409
Query: 196 KKTY 199
K +
Sbjct: 410 KSRH 413
>gi|260808231|ref|XP_002598911.1| hypothetical protein BRAFLDRAFT_122442 [Branchiostoma floridae]
gi|229284186|gb|EEN54923.1| hypothetical protein BRAFLDRAFT_122442 [Branchiostoma floridae]
Length = 1222
Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C CDYF+ + SH+ HTGEKPY C QC + +A + L++HL K
Sbjct: 517 MRTHTGEKPYKCDQCDYFATQKSSLDSHLVKHTGEKPYTCDQCDYSAAHKSSLNFHLAK 575
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C CDY + + +H+RTHTG+KPY C QC + +A L HL K
Sbjct: 601 MRTHTGEKPYTCDQCDYSAARKSHLSAHMRTHTGQKPYTCDQCDYSAAQKFNLDQHLTK 659
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y +Y + H+RTHTGEKPY C QC + +A L HL K
Sbjct: 1083 YMCGECGYRTYQSSNLSRHMRTHTGEKPYKCDQCDYSAAHKYSLDIHLAK 1132
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + + H+ HTGEKPY CG+C +R+A A L H++
Sbjct: 554 YTCDQCDYSAAHKSSLNFHLAKHTGEKPYMCGECGYRTAHKADLSKHMR 602
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + CY CDY + + H+ HTG+KPY CG+C +R+A + L H+
Sbjct: 99 MRTHTGEKPYKCYQCDYAAAGKSHLDRHLTKHTGDKPYMCGECGYRAAQKSTLSDHM 155
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CDY + ++ H+ HTG+KPY CG+C +R+A + L H++
Sbjct: 223 MRTHTGEKPFQCDQCDYSAAQKCDLQKHVTKHTGDKPYMCGECGYRAARKSHLSQHMR 280
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C Y + + H+RTHTGEKPY C QC + +A A L +H+ K
Sbjct: 1167 YTCGECGYRAAKKSHLSQHMRTHTGEKPYKCDQCDYSAAQKAHLKFHVTK 1216
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + H+ HTGEKPY CG+C +R+A + L H+K
Sbjct: 1102 MRTHTGEKPYKCDQCDYSAAHKYSLDIHLAKHTGEKPYMCGECGYRTAHKSDLTLHVK 1159
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+RTHTGEKPY CG+C +R+A + L H++
Sbjct: 998 YMCGECGYRTSWKSRLSKHMRTHTGEKPYKCGECGYRTAVKSDLSIHVR 1046
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 9/89 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCR-----TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIR 168
C Y A S+ L +H TCK P+ +C C Y S + + H+R
Sbjct: 169 CDYSAAYKSSLGFHLTKHTEIHFGPTCKKHTGEKPY----MCGECGYRSAHKSDLSKHMR 224
Query: 169 THTGEKPYACGQCAFRSASVAGLHYHLKK 197
THTGEKP+ C QC + +A L H+ K
Sbjct: 225 THTGEKPFQCDQCDYSAAQKCDLQKHVTK 253
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T +RT + C CDY + + H HTGEKPY CG+C +R+A + L
Sbjct: 680 TLSKHMRTHTGEKPYRCDQCDYAAARKSDLDKHFTKHTGEKPYMCGKCGYRAAIKSDLSR 739
Query: 194 HLK 196
H++
Sbjct: 740 HIR 742
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C CD+ + + H+ HTGEKPY CG+C +R+A + L H++
Sbjct: 49 RKPYKCDQCDFSAPQKSHLDQHLTKHTGEKPYMCGECGYRTAYKSHLSVHMR 100
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+ THTGEKPY C QC + +A + L +HL K
Sbjct: 136 YMCGECGYRAAQKSTLSDHMLTHTGEKPYKCDQCDYSAAYKSSLGFHLTK 185
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
+R + C CDY + N +++H+ HTGEKPY CG+C +R+ + L H++
Sbjct: 1045 VRIHTGEKPYKCDQCDYSAANKSSLKNHLAARHTGEKPYMCGECGYRTYQSSNLSRHMR 1103
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + + H++THTG KPY CG+C +R+A + L H++
Sbjct: 1139 YMCGECGYRTAHKSDLTLHVKTHTGVKPYTCGECGYRAAKKSHLSQHMR 1187
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + + C CDY + + H+ H GEKPY CG+C +R+A L H++
Sbjct: 629 MRTHTGQKPYTCDQCDYSAAQKFNLDQHLTKHNGEKPYMCGECEYRAAQKLTLSKHMR 686
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + + H+RTHTGEKPY C QC + +A + L H++
Sbjct: 582 YMCGECGYRTAHKADLSKHMRTHTGEKPYTCDQCDYSAARKSHLSAHMR 630
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C+Y + + H+RTHTGEKPY C QC + +A + L H K
Sbjct: 666 YMCGECEYRAAQKLTLSKHMRTHTGEKPYRCDQCDYAAARKSDLDKHFTK 715
Score = 45.8 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKPY CG+C +R++ + L H++
Sbjct: 970 YKCDKCDYSAALKSTLDCHLMKHTGEKPYMCGECGYRTSWKSRLSKHMR 1018
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + +R H+RTHTGEKPY C QC + + + L HL K
Sbjct: 498 YMCGECGFQGRYPSDLRRHMRTHTGEKPYKCDQCDYFATQKSSLDSHLVK 547
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTG KPY C QC + +A + L H+ K
Sbjct: 260 YMCGECGYRAARKSHLSQHMRTHTGNKPYKCDQCDYSAAQKSTLDKHVAK 309
Score = 45.1 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + C C Y + + H+R HTGEKPY C QC + +A+ + L HL
Sbjct: 1017 MRTHTGEKPYKCGECGYRTAVKSDLSIHVRIHTGEKPYKCDQCDYSAANKSSLKNHL 1073
Score = 43.1 bits (100), Expect = 0.057, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGEKP+ C QC + +A L H+
Sbjct: 913 YMCGECGYRAARKFTLSVHMRTHTGEKPFKCDQCDYSAAQKINLDNHI 960
Score = 43.1 bits (100), Expect = 0.063, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C DY + + HI H GEKPY CG+C +R+A L H++
Sbjct: 885 YKCDQSDYSAAKKSNLDQHITKHAGEKPYMCGECGYRAARKFTLSVHMR 933
Score = 41.2 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAG 190
+RT + C CDY + + H+ HTG+KPY CG+C + G
Sbjct: 279 MRTHTGNKPYKCDQCDYSAAQKSTLDKHVAKHTGDKPYMCGECGIAEMANCG 330
Score = 40.0 bits (92), Expect = 0.60, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT F C CDY + + +HI H+GEKPY C +C + +A + L HL K
Sbjct: 932 MRTHTGEKPFKCDQCDYSAAQKINLDNHIAAKHSGEKPYKCDKCDYSAALKSTLDCHLMK 991
>gi|327281289|ref|XP_003225381.1| PREDICTED: transcriptional repressor CTCF-like [Anolis
carolinensis]
Length = 731
Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.8 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 36.6 bits (83), Expect = 6.5, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|432959345|ref|XP_004086251.1| PREDICTED: transcriptional repressor CTCF-like [Oryzias latipes]
Length = 833
Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/125 (32%), Positives = 53/125 (42%), Gaps = 20/125 (16%)
Query: 79 CKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKS 137
C HC + ++ DL H + I C YC AV LI+H ++ K+
Sbjct: 502 CPHCDTVIARKSDLGVHLRKQHSFIETGKK------CRYCDAVFHERY-ALIQHQKSHKN 554
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHL 195
+F C CDY M H RTHTGEKP+ C QC FR + +H+
Sbjct: 555 -------EKRFKCDMCDYCCRQERHMVMHRRTHTGEKPFGCSQCEKTFRQKQLLDMHF-- 605
Query: 196 KKTYH 200
K YH
Sbjct: 606 -KRYH 609
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 51/120 (42%), Gaps = 17/120 (14%)
Query: 87 SHLDLLDH-CKTCSYMIRP--------NANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
SH D H C C R N + P C C T+ EL+ H R
Sbjct: 350 SHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTS-GELVRHRRYKH 408
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ PF+ C CDY S + ++ HIR+HTGE+P+ C C++ S L H++
Sbjct: 409 T--HEKPFK----CSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMR 462
Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 430 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 489
Score = 37.0 bits (84), Expect = 4.4, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 352 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHT 409
Query: 199 Y 199
+
Sbjct: 410 H 410
>gi|297284247|ref|XP_001091862.2| PREDICTED: transcriptional repressor CTCF-like isoform 1 [Macaca
mulatta]
Length = 696
Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 438 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 489
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 490 KPYACSHCDKTFRQKQLLDMHF---KRYH 515
Score = 45.8 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 336 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 395
Score = 41.6 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 43/111 (38%), Gaps = 17/111 (15%)
Query: 94 HCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC 153
C+ CSY +N + ++ +E C C RT +
Sbjct: 267 QCELCSYTCPRRSN---------LDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHT 317
Query: 154 D--------YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
D + Y + ++ HIR+HTGE+P+ C C++ S L H++
Sbjct: 318 DDHDQVGVNHKQYAVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMR 368
>gi|354492938|ref|XP_003508601.1| PREDICTED: transcriptional repressor CTCF [Cricetulus griseus]
gi|344240945|gb|EGV97048.1| Transcriptional repressor CTCF [Cricetulus griseus]
Length = 734
Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 53.5 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.8 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 36.2 bits (82), Expect = 6.9, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|256073469|ref|XP_002573053.1| zinc finger protein [Schistosoma mansoni]
gi|360044327|emb|CCD81874.1| putative zinc finger protein [Schistosoma mansoni]
Length = 673
Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCK---SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
C C+ T L++L H R + +P KF C C+Y + N G M H R H
Sbjct: 165 CRQCEEFFET-LSQLFLHARRSHVDPKKPKRNPANFKFHCDQCNYMTNNGGTMEHHKRAH 223
Query: 171 TGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
TGEKP+ C C R A A + H + H
Sbjct: 224 TGEKPFVCDVCNKRFAQKANMKTHRNRHIH 253
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 65/127 (51%), Gaps = 10/127 (7%)
Query: 79 CKHCHSQLSHLDL-LDHCKTCSYMIRPN----ANNTFSPFCIYCKAVLSTNLNELIEHCR 133
C C+ S D+ L H +T + +R + A++ + C+ C AV ++ L +H R
Sbjct: 260 CDTCNKAFSSYDIYLAHLRTREHELREHFAMMASSQLALECLGC-AVTFDSIYNLNKHTR 318
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS-ASVAGLH 192
+C+ ++RT + KF C C+ + ++ +++H++ H G + +C C R L+
Sbjct: 319 SCR-IVRT--LQTKFRCLPCNAYVSDVASLKAHVKAHEGSQIISCPVCGERGFPGFNQLN 375
Query: 193 YHLKKTY 199
+H+ + +
Sbjct: 376 HHITRAH 382
>gi|260787833|ref|XP_002588956.1| hypothetical protein BRAFLDRAFT_89147 [Branchiostoma floridae]
gi|229274128|gb|EEN44967.1| hypothetical protein BRAFLDRAFT_89147 [Branchiostoma floridae]
Length = 652
Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 21/126 (16%)
Query: 91 LLDHCKTCSYMIRPNANNTFSPFCIYCKAVLS----------TNLNELIEHCRTC----- 135
+ + C ++ PN + SP ++C S +N NE CR C
Sbjct: 1 MAEACDGYPTVVPPNFGDG-SPTGVFCDQPTSGRARLVRQPKSNTNEKPYMCRECGYRAA 59
Query: 136 -----KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAG 190
+RT F C CDY + + H+ HTG+KPY CG+C +R+A +
Sbjct: 60 VKSHLSQHMRTHTGDKPFKCDQCDYSAAQKSSLDLHLAKHTGDKPYMCGECGYRTAKRSH 119
Query: 191 LHYHLK 196
L H++
Sbjct: 120 LANHMR 125
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CDY + + H+ HTG+KPY CG+C +R+A + L H++
Sbjct: 124 MRTHTGDKPFKCDQCDYSTAYKPNLDRHLSKHTGDKPYMCGECGYRAAEKSALVKHMR 181
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGEKPY C QC + +A L HL
Sbjct: 161 YMCGECGYRAAEKSALVKHMRTHTGEKPYKCDQCYYSAAQRCSLDQHL 208
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + +H+RTHTG+KP+ C QC + +A L HL K
Sbjct: 105 YMCGECGYRTAKRSHLANHMRTHTGDKPFKCDQCDYSTAYKPNLDRHLSK 154
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 17/111 (15%)
Query: 95 CKTCSYMI--RPNANNTFS------PF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFR 145
C C Y +PN + S P+ C C + + L++H RT P++
Sbjct: 135 CDQCDYSTAYKPNLDRHLSKHTGDKPYMCGEC-GYRAAEKSALVKHMRTHTG---EKPYK 190
Query: 146 HKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
C C Y + + H+ HTG+KPY CG+C +R+A L H++
Sbjct: 191 ----CDQCYYSAAQRCSLDQHLAHHTGDKPYMCGECGYRTAKKCYLSRHMR 237
>gi|260823106|ref|XP_002604024.1| hypothetical protein BRAFLDRAFT_71687 [Branchiostoma floridae]
gi|229289349|gb|EEN60035.1| hypothetical protein BRAFLDRAFT_71687 [Branchiostoma floridae]
Length = 677
Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 34/58 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + HIR HTGEKPY CG+C FR+A + L H++
Sbjct: 113 MRTHSGEKPYKCDQCDYSAADKSTLVKHIRKHTGEKPYMCGECGFRTAGRSTLSRHMR 170
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT P F C CDY + + H+ THTGEKPY CG+C R+A + L H++
Sbjct: 225 MRTHPGEKPFTCDRCDYSAAQKCTLDRHLMTHTGEKPYMCGECGHRTAEKSDLARHMR 282
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + + HIR HTGEKPY CG+C FR+A + L H++
Sbjct: 497 YKCDQCDYSAADKSTLVKHIRKHTGEKPYMCGECGFRTAGRSTLSRHMR 545
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y +Y+ + +H+RTH+GEKPY C QC + +A + L H++K
Sbjct: 94 FMCVECGYRAYSRSILSAHMRTHSGEKPYKCDQCDYSAADKSTLVKHIRK 143
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 36/63 (57%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T +RT ++ C CDY + + H+ THTGEKP+ CG+C +R+A + L+
Sbjct: 164 TLSRHMRTHTGERRYKCDQCDYCAARKYDLDKHLATHTGEKPFMCGECGYRTARKSTLYK 223
Query: 194 HLK 196
H++
Sbjct: 224 HMR 226
Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y +Y + +H+R H+GEKPY C QC + +A + L H++K
Sbjct: 469 FLCVECGYRAYTRSILSAHMRKHSGEKPYKCDQCDYSAADKSTLVKHIRK 518
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + H+RTH+G+KPY C QC + +A + L +HL+K
Sbjct: 581 FMCGECGYSTARKSTLYRHMRTHSGKKPYKCDQCDYSAAQKSALDFHLRK 630
Score = 49.7 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T +RT ++ C CDY + + H+ THTGEKP+ CG+C + +A + L+
Sbjct: 539 TLSRHMRTHTGERRYKCDQCDYCAARKDDLDKHLATHTGEKPFMCGECGYSTARKSTLYR 598
Query: 194 HLK 196
H++
Sbjct: 599 HMR 601
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 27/49 (55%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++VC C Y + + H+RTHTGEKPY C C F SA L H+
Sbjct: 412 RYVCDVCGYKTPYRPTLSQHMRTHTGEKPYKCDHCDFSSARKDDLKKHV 460
Score = 44.7 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 27/49 (55%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++VC C Y + + H+RTHTGEKPY C C F SA L H+
Sbjct: 37 RYVCDVCGYKTPYRPTLFQHMRTHTGEKPYKCDHCDFSSARKDDLKKHV 85
Score = 43.9 bits (102), Expect = 0.041, Method: Composition-based stats.
Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 167 IRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RTHTGEKPY C QC + +A + LH HL K
Sbjct: 1 MRTHTGEKPYKCDQCDYSAAQKSALHRHLAK 31
Score = 43.5 bits (101), Expect = 0.043, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T +RT + C CD+ S ++ H+ HTG+KP+ C +C +R+ + + L
Sbjct: 427 TLSQHMRTHTGEKPYKCDHCDFSSARKDDLKKHVANHTGDKPFLCVECGYRAYTRSILSA 486
Query: 194 HLKK 197
H++K
Sbjct: 487 HMRK 490
Score = 42.0 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CD+ S ++ H+ HTG KP+ C +C +R+ S + L H++
Sbjct: 57 MRTHTGEKPYKCDHCDFSSARKDDLKKHVANHTGNKPFMCVECGYRAYSRSILSAHMR 114
Score = 41.2 bits (95), Expect = 0.24, Method: Composition-based stats.
Identities = 17/29 (58%), Positives = 20/29 (68%)
Query: 169 THTGEKPYACGQCAFRSASVAGLHYHLKK 197
THTGEKPY C QC + +A + LH HL K
Sbjct: 378 THTGEKPYKCDQCDYSAAQKSALHAHLAK 406
Score = 39.3 bits (90), Expect = 0.90, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 28/57 (49%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
IR ++C C + + + H+RTHTGE+ Y C QC + +A L HL
Sbjct: 141 IRKHTGEKPYMCGECGFRTAGRSTLSRHMRTHTGERRYKCDQCDYCAARKYDLDKHL 197
Score = 39.3 bits (90), Expect = 0.90, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 28/57 (49%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
IR ++C C + + + H+RTHTGE+ Y C QC + +A L HL
Sbjct: 516 IRKHTGEKPYMCGECGFRTAGRSTLSRHMRTHTGERRYKCDQCDYCAARKDDLDKHL 572
Score = 37.0 bits (84), Expect = 4.3, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 153 CDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASV 188
CDY + + + HI THTGEKPY CG A S+ V
Sbjct: 642 CDYSAAHKRTLDRHIMTHTGEKPYMCGVWAEDSSKV 677
>gi|432848834|ref|XP_004066474.1| PREDICTED: zinc finger protein 184-like [Oryzias latipes]
Length = 430
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 112 PF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
PF C CK ST N K+ +RT F C C+ I +++H+RTH
Sbjct: 205 PFSCNECKKDFSTISN--------LKTHMRTHTGEKPFSCKECEKGFSTISNLKTHMRTH 256
Query: 171 TGEKPYACGQCAFRSASVAGLHYHLK 196
TGEKP++C +CA R ++V+ L HL+
Sbjct: 257 TGEKPFSCTECAKRFSTVSDLKRHLR 282
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 58/142 (40%), Gaps = 33/142 (23%)
Query: 78 LCKHCHSQLSHLDLLDH------------CKTCSYMIRPNANNTFSPFCI-YCKAVLSTN 124
LCK C + S L L CK C + +FS C+ Y KA + T+
Sbjct: 291 LCKECETSFSDLSHLTRHMRTHTGEKPFLCKVC--------DKSFS--CVSYLKAHMKTH 340
Query: 125 LNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK 174
E C+ C K+ +RT F C CD I ++ HIR HTGEK
Sbjct: 341 TKEKPFLCKECDASFNRISNLKTHMRTHTGEEHFFCKECDTTFSQICSLKRHIRIHTGEK 400
Query: 175 PYACGQCAFRSASVAGLHYHLK 196
P +C C R V+ L H++
Sbjct: 401 PLSCKICKKRFRDVSSLKRHMR 422
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
S RT F C C + +++H+RTHTGEKP++C +C ++++ L H++
Sbjct: 167 SKFRTHTDERLFSCKECAKVFSTVSNLKTHMRTHTGEKPFSCNECKKDFSTISNLKTHMR 226
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
CK C S + L ++M FS C C ST +++L H RT
Sbjct: 236 CKECEKGFSTISNLK-----THMRTHTGEKPFS--CTECAKRFST-VSDLKRHLRT---H 284
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
I PF +C C+ ++ + H+RTHTGEKP+ C C + V+ L H+K
Sbjct: 285 IGEKPF----LCKECETSFSDLSHLTRHMRTHTGEKPFLCKVCDKSFSCVSYLKAHMK 338
>gi|321456217|gb|EFX67330.1| putative CCCTC-binding factor protein [Daphnia pulex]
Length = 700
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C +C + +T+ EL+ H R + P R C CDY S + ++ H+R HTGE
Sbjct: 285 CKHCHSSFTTS-GELVRHVRYRHT--HEKPHR----CTECDYASVELSKLKRHMRCHTGE 337
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
+PY C C + S L HL+
Sbjct: 338 RPYQCPHCTYASPDTFKLKRHLR 360
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 79 CKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKS 137
CKHCHS + +L+ H + +P+ C C S L++L H R C +
Sbjct: 285 CKHCHSSFTTSGELVRHVRYRHTHEKPHR-------CTECDYA-SVELSKLKRHMR-CHT 335
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
R P++ C C Y S + ++ H+R HTGEKPY C C R L H
Sbjct: 336 GER--PYQ----CPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAH 386
Score = 39.3 bits (90), Expect = 0.85, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 55/139 (39%), Gaps = 20/139 (14%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNEL--IEHCRTCK 136
C CH++ + + L K +P P K L ++ +L E CK
Sbjct: 370 CDICHARFTQSNSLKAHKLIHTGNKPIFQCELCPTTCGRKTDLRIHVQKLHTSEKPLKCK 429
Query: 137 SMIRTDPFRHKFV----------CYACD---YFSYNIGCMRSHIRTHTGEKPYACGQC-- 181
++ P R+ F C+ CD Y S + + SH+ HT +KPY C QC
Sbjct: 430 RCGKSFPDRYTFKLHSKTHEGEKCFKCDLCAYASISQRHLESHMLIHTDQKPYQCDQCDQ 489
Query: 182 AFRSASVAGLHYHLKKTYH 200
FR + H +L YH
Sbjct: 490 CFRQKQLLRRHQNL---YH 505
>gi|432852780|ref|XP_004067381.1| PREDICTED: transcriptional repressor CTCF-like [Oryzias latipes]
Length = 753
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/125 (33%), Positives = 54/125 (43%), Gaps = 20/125 (16%)
Query: 79 CKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKS 137
C HC + ++ DL H + I C YC AV LI+H +T K+
Sbjct: 437 CPHCDTVIARKSDLGVHLRKQHSFIETGKK------CRYCDAVFHERY-ALIQHQKTHKN 489
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHL 195
+F C CDY M H RTHTGEKP+AC QC FR + +H+
Sbjct: 490 -------EKRFKCDQCDYCCRQERHMIMHKRTHTGEKPFACEQCEKTFRQKQLLDMHF-- 540
Query: 196 KKTYH 200
K YH
Sbjct: 541 -KRYH 544
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 331 TSGELVRHRRYKHTHEKPFKCSMCDYSSVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 390
Query: 190 GLHYHLK 196
L H++
Sbjct: 391 KLKRHMR 397
Score = 45.1 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 365 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 424
Score = 35.8 bits (81), Expect = 9.8, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 287 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHT 344
Query: 199 Y 199
+
Sbjct: 345 H 345
>gi|260823074|ref|XP_002604008.1| hypothetical protein BRAFLDRAFT_71703 [Branchiostoma floridae]
gi|229289333|gb|EEN60019.1| hypothetical protein BRAFLDRAFT_71703 [Branchiostoma floridae]
Length = 1575
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 17/100 (17%)
Query: 114 CIYCKAVLSTNLNELIEH-------CRTC--KSMIRTDPFRH--------KFVCYACDYF 156
C Y A+ S +N + +H C C ++++++D RH + C CDY
Sbjct: 126 CDYSAALKSNLVNHIRKHTGEKPCMCGECGYRTILKSDLSRHLVTHTGEKPYKCDQCDYS 185
Query: 157 SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ + SHI HTG+KPY CG+C +R+A L H+K
Sbjct: 186 AARKHNLDSHITQHTGDKPYTCGECGYRTAQRCKLSLHMK 225
Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 131 HCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAG 190
C + M RT + C CDY + G + H+ HTGEKPY CG+C +R+A
Sbjct: 1264 QCHLSRHM-RTHTGERPYNCDQCDYSAAQKGDLDKHLAKHTGEKPYMCGECGYRAAQRCN 1322
Query: 191 LHYHLK 196
L H+K
Sbjct: 1323 LSRHMK 1328
Score = 52.8 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R P++ C CDY ++ + H+RTHTGEKPY CG+C FR++ + L H++
Sbjct: 887 RQKPYK----CDHCDYSAHREWHLLQHLRTHTGEKPYMCGECGFRTSYKSCLSQHMR 939
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+R + C+ CDY + + + H+ H+GEKPY CG+C +R+ L H++
Sbjct: 1215 VRIHTGEKPYKCHQCDYSTAHKANLEKHVAKHSGEKPYMCGECGYRTTHQCHLSRHMR 1272
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+ C C Y + + H++THTGEKPY C QC + +A + L HL KT+
Sbjct: 205 YTCGECGYRTAQRCKLSLHMKTHTGEKPYKCDQCDYSAAQKSNLDKHLSKTH 256
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F+C C Y S + +H+ THTG+KPY C QC +R+A + L H++
Sbjct: 1112 FICGECGYRSARKSNVSTHMITHTGDKPYKCDQCGYRTAWKSHLSQHMR 1160
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 30/59 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT F+C C Y + + H+RTHTGEKPY C QC F + L H +K
Sbjct: 1427 LRTHTGEKPFMCGECGYRASQKSHLSKHMRTHTGEKPYKCDQCDFSAIDKFKLKQHQEK 1485
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++T + C CDY + G + H+ HTGE+P+ CG+C +RSA + + H+
Sbjct: 1075 MKTHTGERPYKCDQCDYSAAQKGDLDKHLVKHTGEQPFICGECGYRSARKSNVSTHM 1131
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++T + C CDY + + H HTGEKPY CG+C +R+A + L H++
Sbjct: 287 MKTHTGERPYKCDQCDYSAAQKSNLDQHQAKHTGEKPYMCGECGYRAARKSKLLVHMR 344
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 139 IRTDPFRHKFVCYACDY-------FSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
++T + C CDY ++ HIR HTG+KPY CG+C +R+A L
Sbjct: 224 MKTHTGEKPYKCDQCDYSAAQKSNLDKHLSKTHRHIRKHTGDKPYLCGECGYRTAQRCNL 283
Query: 192 HYHLK 196
H+K
Sbjct: 284 SLHMK 288
Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + C CDY + + +HIR HTGEKP CG+C +R+ + L HL
Sbjct: 112 MRTHTGEKPYKCDQCDYSAALKSNLVNHIRKHTGEKPCMCGECGYRTILKSDLSRHL 168
Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+RTHTGE+PY C QC + +A L HL K
Sbjct: 1252 YMCGECGYRTTHQCHLSRHMRTHTGERPYNCDQCDYSAAQKGDLDKHLAK 1301
Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A + L H++K
Sbjct: 93 YICEECGYRADCKAHLFRHMRTHTGEKPYKCDQCDYSAALKSNLVNHIRK 142
Score = 45.8 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGE+PY C QC + +A + L H+ K
Sbjct: 324 YMCGECGYRAARKSKLLVHMRTHTGERPYKCEQCGYSAAQKSNLDEHVAK 373
Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKT 198
+RT ++C C + + C+ H+RTHTGEKP+ C QC + + L H+
Sbjct: 910 LRTHTGEKPYMCGECGFRTSYKSCLSQHMRTHTGEKPHKCDQCDYSAGQRGHLLRHIASK 969
Query: 199 Y 199
+
Sbjct: 970 H 970
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 120 VLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACG 179
V T N +H R + R P HK C C+Y + + H+ H GEK Y CG
Sbjct: 765 VQETKGNTGTQHIRRNRRS-REKPRFHK--CDQCNYSTSRASYLVQHLTNHHGEKAYMCG 821
Query: 180 QCAFRSASVAGLHYHLK 196
+C R+A +GL H+K
Sbjct: 822 ECGHRTAYKSGLSSHMK 838
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C Y + + H+ HTGEKPY CG+C +R+ + L H++
Sbjct: 343 MRTHTGERPYKCEQCGYSAAQKSNLDEHVAKHTGEKPYICGECGYRAIRKSKLVVHMR 400
Score = 44.3 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H++THTGE+PY C QC + +A L HL K
Sbjct: 1056 YMCGECGYRTIYRSHLSRHMKTHTGERPYKCDQCDYSAAQKGDLDKHLVK 1105
Score = 44.3 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + SH++THTGEKPY C QC + +A + L+ H K
Sbjct: 818 YMCGECGHRTAYKSGLSSHMKTHTGEKPYKCDQCDYSAARKSTLNRHQAK 867
Score = 43.9 bits (102), Expect = 0.035, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 34/72 (47%)
Query: 126 NELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
+ L +H IR ++C C Y + + H++THTGE+PY C QC + +
Sbjct: 246 SNLDKHLSKTHRHIRKHTGDKPYLCGECGYRTAQRCNLSLHMKTHTGERPYKCDQCDYSA 305
Query: 186 ASVAGLHYHLKK 197
A + L H K
Sbjct: 306 AQKSNLDQHQAK 317
Score = 43.9 bits (102), Expect = 0.036, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+R+ + C CDY + + H H+GEKPY CG+C +R+A + L H++
Sbjct: 1511 MRSHTGEKPYKCDQCDYSAAEKHHLIDHQTRHSGEKPYMCGECGYRAAQRSTLSRHME 1568
Score = 43.5 bits (101), Expect = 0.043, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 24/31 (77%)
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
H+RTHTGEKP+ CG+C +R++ + L H++
Sbjct: 1426 HLRTHTGEKPFMCGECGYRASQKSHLSKHMR 1456
Score = 43.5 bits (101), Expect = 0.048, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CD+ + + ++ H H G+KPY CG+CA+ +A + L H++
Sbjct: 1455 MRTHTGEKPYKCDQCDFSAIDKFKLKQHQEKHAGDKPYKCGECAYMTAYRSHLSRHMR 1512
Score = 42.7 bits (99), Expect = 0.074, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C Y + + H+RTHTGEKPY C QC + +A + H+ K
Sbjct: 1140 YKCDQCGYRTAWKSHLSQHMRTHTGEKPYKCDQCDYSAAQKSTFDQHVIK 1189
Score = 42.0 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH-LKKT 198
++C C Y + + H+RTH+GEKPY C QC + + L H LK T
Sbjct: 380 YICGECGYRAIRKSKLVVHMRTHSGEKPYKCDQCEYSATQKCTLDRHRLKHT 431
Score = 42.0 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G M H+ HTGEKPY CG+C +R+ + L H+K
Sbjct: 1041 GYMGGHVVKHTGEKPYMCGECGYRTIYRSHLSRHMK 1076
Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
+ C C Y + + H+R+HTGEKPY C QC + +A
Sbjct: 1492 YKCGECAYMTAYRSHLSRHMRSHTGEKPYKCDQCDYSAA 1530
Score = 40.4 bits (93), Expect = 0.38, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + H+ HTGE+ Y C C +R+A + L H++
Sbjct: 1159 MRTHTGEKPYKCDQCDYSAAQKSTFDQHVIKHTGEQTYMCEMCGYRTAKKSHLTEHVR 1216
Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Query: 148 FVCYACDYFSYNI--GCMRS---HIRTHTGEKPYACGQCAFRSASV 188
++C C Y S + CM + H+RTHTGEKP+ C QC + + V
Sbjct: 590 YMCDECGYSSTKMYDSCMTNLTVHMRTHTGEKPFKCDQCDYSANMV 635
Score = 37.7 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H++ HT +KPY C QC + A + L+ H K
Sbjct: 1308 YMCGECGYRAAQRCNLSRHMKIHTADKPYKCDQCDYSVAQKSTLNKHNK 1356
>gi|171474905|gb|ACB47393.1| CCCTC-binding factor [Pogona vitticeps]
Length = 727
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.8 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 36.2 bits (82), Expect = 7.2, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|260823126|ref|XP_002604034.1| hypothetical protein BRAFLDRAFT_71676 [Branchiostoma floridae]
gi|229289359|gb|EEN60045.1| hypothetical protein BRAFLDRAFT_71676 [Branchiostoma floridae]
Length = 1271
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 36/59 (61%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT ++C CDY + + M H+ H+GEKPY CG+C FR+A + L+ H+K+
Sbjct: 1207 MRTHTGERPYLCDQCDYSAAHKQYMIDHLTKHSGEKPYMCGECGFRAAQRSTLYRHMKR 1265
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 17/100 (17%)
Query: 114 CIYCKAVLSTNLNELIEH-------CRTC--KSMIRTDPFRH--------KFVCYACDYF 156
C Y AV ST L +H C C ++ R++ RH + C CDY
Sbjct: 997 CDYSAAVKSTLDKHLAKHADEKPFMCGECGYRTTQRSNLSRHMRTHTGEKPYKCNQCDYS 1056
Query: 157 SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ N + HI HTGEKPY CG+C +R+A+ L +K
Sbjct: 1057 AANKSALDHHIEKHTGEKPYMCGECGYRAANECNLSRPMK 1096
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++T + C CDY + + + H R HTGEKPY CG+C +R+A + L H++
Sbjct: 1151 MKTHTGEKPYKCDQCDYSAADKFTLDKHQRIHTGEKPYMCGECGYRTADRSHLSRHMR 1208
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT ++C C Y + + H+RTHTGEKPY C QC + +A + L HL+
Sbjct: 500 LRTHNDEKPYMCGECGYRAAYRSHLSRHMRTHTGEKPYKCDQCDYSAARKSSLDEHLQ 557
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 111 SPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
+P C+ C AVL L + T +RT + C+ CDY + + H+ H
Sbjct: 706 NPTCVEC-AVLG-QLGSI-----TVGKHMRTHSGERLYKCHQCDYSAGQKCDLDKHLVKH 758
Query: 171 TGEKPYACGQCAFRSASVAGLHYHLK 196
TGEKPY CG+C +R+ L H++
Sbjct: 759 TGEKPYMCGECGYRANYKVSLSQHMR 784
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C CDY + + H++ H+GEKPY CG+C +R+A + L
Sbjct: 614 MRTHTGEKPYKCDQCDYSAARKSSLDEHLQIHSGEKPYMCGECGYRTAHQSKL 666
Score = 47.0 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
+RT + C CDY + + H++ H+GEKPY CG+C +R+A
Sbjct: 528 MRTHTGEKPYKCDQCDYSAARKSSLDEHLQIHSGEKPYMCGECGYRTA 575
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTG+KPY C QC + +A + L H+ K
Sbjct: 906 YICGECGYRTARKSDLSQHMRTHTGQKPYKCDQCDYSAARKSQLKRHVAK 955
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGC-MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + I +H+RTH EKPY CG+C +R+A + L H++
Sbjct: 471 MRTHTGEKPYKCDQCDYSAATISPPWVAHLRTHNDEKPYMCGECGYRAAYRSHLSRHMR 529
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 11/83 (13%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C Y AV + LI+H +T PF+ C CDY + + ++ H HTGE
Sbjct: 267 CDYAAAVK----HNLIDHQKTHSG---EKPFK----CDQCDYSAVDKSKLKQHQVKHTGE 315
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
KPY CG+C + +A + L H++
Sbjct: 316 KPYMCGECGYGTAYRSHLSRHMR 338
Score = 45.8 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHT--GEKPYACGQCAFRSASVAGLHYHLK 196
+RT + + C CDY + ++ H+ HT GEKPY CG+C +R+ + L H++
Sbjct: 925 MRTHTGQKPYKCDQCDYSAARKSQLKRHVAKHTATGEKPYMCGECGYRATQKSDLSKHMR 984
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C + + + H+RTHTGEKPY C QC + +A + L HL+
Sbjct: 595 YMCGVCGFRAAYRSHLSRHMRTHTGEKPYKCDQCDYSAARKSSLDEHLQ 643
Score = 44.7 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
++C C Y + + H+RTHTGEKPY C QC + +A+++
Sbjct: 452 YMCGECGYRAIYRSNLSRHMRTHTGEKPYKCDQCDYSAATIS 493
Score = 44.3 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+RTHTGEKPY C QC++ + + + H K
Sbjct: 764 YMCGECGYRANYKVSLSQHMRTHTGEKPYKCDQCSYSAVKKSAMSKHNK 812
Score = 43.9 bits (102), Expect = 0.033, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+RTHTGE+PY C QC + +A + HL K
Sbjct: 1188 YMCGECGYRTADRSHLSRHMRTHTGERPYLCDQCDYSAAHKQYMIDHLTK 1237
Score = 43.9 bits (102), Expect = 0.038, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HTGE PY C QC + +A + L HL K
Sbjct: 964 YMCGECGYRATQKSDLSKHMRIHTGETPYKCDQCDYSAAVKSTLDKHLAK 1013
Score = 42.7 bits (99), Expect = 0.085, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 136 KSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
KS ++ +H ++C C Y + + H+RTHTGEKPY C QC + +A
Sbjct: 302 KSKLKQHQVKHTGEKPYMCGECGYGTAYRSHLSRHMRTHTGEKPYKCDQCDYSAA 356
Score = 42.0 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 148 FVCYACDYFS--YNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + N + H+ H+GEKPY CG C FR+A + L H++
Sbjct: 565 YMCGECGYRTAHQNKSNLDQHLPQHSGEKPYMCGVCGFRAAYRSHLSRHMR 615
Score = 41.6 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ H EKP+ CG+C +R+ + L H++
Sbjct: 992 YKCDQCDYSAAVKSTLDKHLAKHADEKPFMCGECGYRTTQRSNLSRHMR 1040
Score = 40.8 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G M H+ HTG+KPY CG+C +R+ + L H++
Sbjct: 437 GSMGRHVVKHTGDKPYMCGECGYRAIYRSNLSRHMR 472
Score = 40.8 bits (94), Expect = 0.35, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + N + ++ HTGEKPY C QC + +A + HL K
Sbjct: 1076 YMCGECGYRAANECNLSRPMKIHTGEKPYKCDQCDYSAAQKSTFDKHLVK 1125
Score = 39.7 bits (91), Expect = 0.65, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C CDY + + H +TH+GEKP+ C QC + + + L H K
Sbjct: 253 MRTHTGEKPYKCDQCDYAAAVKHNLIDHQKTHSGEKPFKCDQCDYSAVDKSKLKQHQVK 311
Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 21/34 (61%)
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ H+RTHTGEKPY C QC + +A L H K
Sbjct: 249 LSKHMRTHTGEKPYKCDQCDYAAAVKHNLIDHQK 282
Score = 38.9 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G M ++ +TGEKPY CG+C +R+A + L H++
Sbjct: 891 GNMGRYVVENTGEKPYICGECGYRTARKSDLSQHMR 926
>gi|260827377|ref|XP_002608641.1| hypothetical protein BRAFLDRAFT_97683 [Branchiostoma floridae]
gi|229293993|gb|EEN64651.1| hypothetical protein BRAFLDRAFT_97683 [Branchiostoma floridae]
Length = 503
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 54/108 (50%), Gaps = 15/108 (13%)
Query: 90 DLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFV 149
DLL H MI + C+ C + + N L H RT S+ P++
Sbjct: 408 DLLQH-----VMINHTGEKPY--ICVECGYMTAVRAN-LSAHKRTHSSV---KPYK---- 452
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C C+Y S C++ H+ HTGEKPY CG+C +R+ + A L+ H+KK
Sbjct: 453 CDKCEYSSTRKYCLKQHMNKHTGEKPYLCGECCYRTDTTANLYRHMKK 500
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Query: 107 NNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSH 166
N+ + C C +T N+L+ H + ++C C Y + + H
Sbjct: 245 NSEKAYICEQC-GYRTTEKNQLMRH-------QKRHTGERPYMCEHCGYRTLEKSRLMMH 296
Query: 167 IRTHTGEKPYACGQCAFRSASVAGLHYH 194
RTHTGEKPY C QC + +A+ L+ H
Sbjct: 297 QRTHTGEKPYKCDQCDYSAANSNTLNEH 324
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+VC C + + +H++ HTGEKPY C QC + +AS A L H+
Sbjct: 156 YVCSECGHKMATKTQLTAHMKVHTGEKPYKCDQCDYCAASKAHLDKHV 203
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ H+R H+GEKPY C QC F SA L H++
Sbjct: 369 LNKHMRIHSGEKPYKCDQCEFSSAHRGALKKHVR 402
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
T+P + C C Y + H++THT +KPY C C +R+ L HLK
Sbjct: 8 TNPTVKHYKCDQCTYSTTKKSGFDKHVKTHTEDKPYMCEHCGYRTTKKYMLKKHLK 63
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 13/62 (20%)
Query: 148 FVCYACDYFSYNIGCMRSHIRT-------------HTGEKPYACGQCAFRSASVAGLHYH 194
+ C C++ S + G ++ H+RT HTGEKPY C +C + +A A L H
Sbjct: 382 YKCDQCEFSSAHRGALKKHVRTKHTSDLLQHVMINHTGEKPYICVECGYMTAVRANLSAH 441
Query: 195 LK 196
+
Sbjct: 442 KR 443
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 28/47 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + ++ H++TH+GE+P+ C C + +A+ A L H
Sbjct: 43 YMCEHCGYRTTKKYMLKKHLKTHSGERPFKCDTCEYAAATSATLKEH 89
Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
RT + C CDY + N + H H GEK + C +C +++A L H+++
Sbjct: 298 RTHTGEKPYKCDQCDYSAANSNTLNEHKLRHGGEKRHVCEECGYKTAVKNDLRSHMRR 355
Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC A +L++ + + + D ++ C CDY + + H++TH E
Sbjct: 189 CDYC-AASKAHLDKHVARRHSGEKPYTCDQSVEQYKCDQCDYSTLLKYSLDRHMKTHNSE 247
Query: 174 KPYACGQCAFRSASVAGLHYHLKK 197
K Y C QC +R+ L H K+
Sbjct: 248 KAYICEQCGYRTTEKNQLMRHQKR 271
>gi|260827238|ref|XP_002608572.1| hypothetical protein BRAFLDRAFT_128820 [Branchiostoma floridae]
gi|229293923|gb|EEN64582.1| hypothetical protein BRAFLDRAFT_128820 [Branchiostoma floridae]
Length = 319
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
FVC C Y + G M HI+THTGEKP+ CG+C FR+ + L H +
Sbjct: 177 FVCGECGYMAARKGSMNRHIKTHTGEKPFVCGKCDFRTTRKSNLDVHAR 225
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C C+Y + + H+RTHTGEKP+ACG+C +RSA + + H++
Sbjct: 112 VRTHTGERPFACGKCNYRAARKSTLTLHMRTHTGEKPFACGECGYRSAVRSTMDVHMR 169
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + M H+RTHTGE+P+ACG+C +R+A + L H++
Sbjct: 93 YMCEECGYRGADKKAMDRHVRTHTGERPFACGKCNYRAARKSTLTLHMR 141
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT ++ FVC C Y + + G + H++ HTGEKPY C +C +R A + H++
Sbjct: 56 MRTHTLQNFFVCGECGYRAADKGNVSKHMKIHTGEKPYMCEECGYRGADKKAMDRHVR 113
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
I+T FVC CD+ + + H RTHTGEKP+AC C +R+A + ++ H +
Sbjct: 196 IKTHTGEKPFVCGKCDFRTTRKSNLDVHARTHTGEKPFACPDCDYRTADKSSMNKHAR 253
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C C Y S M H+R HT EKP+ CG+C + +A ++ H+K
Sbjct: 140 MRTHTGEKPFACGECGYRSAVRSTMDVHMRIHTEEKPFVCGECGYMAARKGSMNRHIK 197
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 24/46 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFR 184
RT F C CDY + + M H R HTG+KPY CG+C +
Sbjct: 224 ARTHTGEKPFACPDCDYRTADKSSMNKHARIHTGQKPYTCGECGHK 269
Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
H+RTHTGEKP+ C C +R+A + H+
Sbjct: 279 HMRTHTGEKPFVCMVCGYRAAQQGTMDRHM 308
Score = 36.2 bits (82), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C Y + M +H+RTHT + + CG+C +R+A + H+K
Sbjct: 37 YTCDKCGYSTTVQSTMFTHMRTHTLQNFFVCGECGYRAADKGNVSKHMK 85
>gi|260823024|ref|XP_002603983.1| hypothetical protein BRAFLDRAFT_71729 [Branchiostoma floridae]
gi|229289308|gb|EEN59994.1| hypothetical protein BRAFLDRAFT_71729 [Branchiostoma floridae]
Length = 596
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + HIR HTGEKPY CG+C FR+A + L H++
Sbjct: 318 MRTHSGEKPYKCDQCDYSAADKSTLVKHIRKHTGEKPYMCGECGFRTAYRSTLSRHMR 375
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y +Y+ + +H+RTH+GEKPY C QC + +A + L H++K
Sbjct: 299 FMCVECGYRAYSRSILSAHMRTHSGEKPYKCDQCDYSAADKSTLVKHIRK 348
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CDY + + H+ THTGEKPY CG+C R+A + L H++
Sbjct: 430 MRTHSGEKPFTCDRCDYSAAQKCTLDRHLMTHTGEKPYMCGECGHRTAEKSDLARHMR 487
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT ++ C CDY + + H+ THTGEKP+ CG+C +R+A + L+ H++
Sbjct: 374 MRTHTGERRYKCDQCDYCAARKYDLDKHLATHTGEKPFMCGECGYRTARKSTLYKHMR 431
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C Y + M H+RTHTGEKPY C C + +A L YH+
Sbjct: 172 FMCGECGYRAAYRSHMSQHMRTHTGEKPYKCHHCDYAAAQQGSLAYHI 219
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + + H+RTHTGEKPY C QC + +A L H+
Sbjct: 229 YMCEECGYRATKMFDLSRHMRTHTGEKPYKCDQCDYSAAQKGNLDQHI 276
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C+ CDY + G + HI T HTGEKPY C +C +R+ + L H++
Sbjct: 191 MRTHTGEKPYKCHHCDYAAAQQGSLAYHIATKHTGEKPYMCEECGYRATKMFDLSRHMR 249
Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 11/82 (13%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C Y A ST L++H IR ++C C + + + H+RTHTGE
Sbjct: 332 CDYSAADKST----LVKH-------IRKHTGEKPYMCGECGFRTAYRSTLSRHMRTHTGE 380
Query: 174 KPYACGQCAFRSASVAGLHYHL 195
+ Y C QC + +A L HL
Sbjct: 381 RRYKCDQCDYCAARKYDLDKHL 402
>gi|358338524|dbj|GAA36228.2| zinc finger and SCAN domain-containing protein 2 [Clonorchis
sinensis]
Length = 691
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 114 CIYCKAVLSTNLNELIEHCRTC---KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
C C+ T L++L H R + +P KF C C+Y + N G M H R H
Sbjct: 172 CRQCEEFFET-LSQLFLHARRSHVDPKKPKRNPANFKFHCDQCNYMTNNGGTMEHHKRAH 230
Query: 171 TGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
TGEKPY C C R A A + H + H
Sbjct: 231 TGEKPYVCDVCNKRFAQKANMKTHRNRHIH 260
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 65/127 (51%), Gaps = 10/127 (7%)
Query: 79 CKHCHSQLSHLDL-LDHCKTCSYMIRPN----ANNTFSPFCIYCKAVLSTNLNELIEHCR 133
C C+ S D+ L H +T + +R + A++ + C+ C AV ++ L +H R
Sbjct: 267 CDTCNKAFSSYDIYLAHLRTREHELREHFAMMASSQLALECLGC-AVTFDSIYNLNKHTR 325
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS-ASVAGLH 192
+C+ ++RT + KF C C+ + ++ +++H++ H G + +C C R L+
Sbjct: 326 SCR-IVRT--LQTKFRCLPCNAYVTDVASLKAHVKAHEGSQIISCPVCGERGFPGFNQLN 382
Query: 193 YHLKKTY 199
+H+ + +
Sbjct: 383 HHITRAH 389
>gi|449270674|gb|EMC81331.1| RE1-silencing transcription factor [Columba livia]
Length = 892
Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 43/112 (38%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C K +R
Sbjct: 219 CDRCGY-----NTNRYDHYLAHLKHHNKAGENERVYKCTICTYTTVSEYHWKKHLRNHFP 273
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C YFS HIRTHTGE+PY C C + S+ L H++
Sbjct: 274 RKVYTCSQCSYFSDRKNNYIQHIRTHTGERPYQCAMCPYSSSQKTHLTRHMR 325
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCK--AVLSTNLNELIEH 131
KH H++ + + C C+Y + + N F C + S N I+H
Sbjct: 237 KH-HNKAGENERVYKCTICTYTTVSEYHWKKHLRNHFPRKVYTCSQCSYFSDRKNNYIQH 295
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
IRT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 296 -------IRTHTGERPYQCAMCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 348
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 349 TRHARQVHN 357
Score = 40.4 bits (93), Expect = 0.40, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 19/124 (15%)
Query: 77 SLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTC 135
++C + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 308 AMCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR-- 353
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ P C CDY + + + H+ H + + C C + ++ L YH+
Sbjct: 354 --QVHNGP--KPLTCPHCDYKTADRSNFKKHVELHINPRQFLCPVCDYAASKKCNLQYHI 409
Query: 196 KKTY 199
K +
Sbjct: 410 KSRH 413
>gi|182765460|ref|NP_001116829.1| transcriptional repressor CTCF [Ornithorhynchus anatinus]
gi|171474903|gb|ACB47392.1| CCCTC-binding factor [Ornithorhynchus anatinus]
Length = 728
Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 36.2 bits (82), Expect = 7.7, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|171474901|gb|ACB47391.1| CCCTC-binding factor [Macropus eugenii]
Length = 728
Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 36.2 bits (82), Expect = 7.7, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|1256410|gb|AAC52928.1| 11-zinc-finger transcription factor [Mus musculus]
Length = 736
Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 36.2 bits (82), Expect = 7.6, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|334313072|ref|XP_003339817.1| PREDICTED: transcriptional repressor CTCF-like [Monodelphis
domestica]
Length = 728
Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 36.2 bits (82), Expect = 7.7, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|119603550|gb|EAW83144.1| CCCTC-binding factor (zinc finger protein), isoform CRA_c [Homo
sapiens]
Length = 736
Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 478 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 529
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 530 KPYACSHCDKTFRQKQLLDMHF---KRYH 555
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 342 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 401
Query: 190 GLHYHLK 196
L H++
Sbjct: 402 KLKRHMR 408
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 376 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 435
Score = 36.2 bits (82), Expect = 7.6, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 298 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 355
Query: 199 Y 199
+
Sbjct: 356 H 356
>gi|45384498|ref|NP_990663.1| transcriptional repressor CTCF [Gallus gallus]
gi|1706178|sp|Q08705.1|CTCF_CHICK RecName: Full=Transcriptional repressor CTCF; AltName: Full=11-zinc
finger protein; AltName: Full=CCCTC-binding factor;
AltName: Full=CTCFL paralog
gi|396094|emb|CAA80319.1| CTCF protein [Gallus gallus]
Length = 728
Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMVMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 36.2 bits (82), Expect = 8.4, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|260823128|ref|XP_002604035.1| hypothetical protein BRAFLDRAFT_71675 [Branchiostoma floridae]
gi|229289360|gb|EEN60046.1| hypothetical protein BRAFLDRAFT_71675 [Branchiostoma floridae]
Length = 444
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + G + H+ TH+GEKPY CG+C +R+A A L H++K
Sbjct: 280 YKCNQCDYSTAQKGNLDQHLMTHSGEKPYMCGKCGYRTAQKANLSKHMRK 329
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 52/131 (39%), Gaps = 29/131 (22%)
Query: 95 CKTCSYMIRPNAN--------NTFSPF----CIYCKAVLSTNLNELIEH-------CRTC 135
C C Y NAN P+ C Y A ST N L++H C C
Sbjct: 86 CGECGYRTAVNANLSRHMRTHTGERPYKCDQCDYSAAQKSTLDNHLVKHTGDKPYMCGEC 145
Query: 136 K----------SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
+ +RT + C CDY + G + H+ HT EKPY CG+C +R+
Sbjct: 146 GFRTTRKSHLSAHMRTHTGERPYKCDKCDYSAAQKGNLNKHVAKHTDEKPYMCGECGYRT 205
Query: 186 ASVAGLHYHLK 196
A L H++
Sbjct: 206 ARKFDLSQHMR 216
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + G + H+ HTGEKPY CG+C +R+A + L HL+
Sbjct: 336 YKCDQCDYAAAQKGNLDQHLMKHTGEKPYMCGECGYRTAQRSNLSQHLR 384
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C+Y S + H+ HTGEKPY CG+C +R+A L H+K
Sbjct: 215 MRTHTGEQNYKCDQCNYSSSRKSHLEQHVAKHTGEKPYLCGECGYRAARKFTLSEHMK 272
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H++THTGEKPY C QC + +A L HL
Sbjct: 252 YLCGECGYRAARKFTLSEHMKTHTGEKPYKCNQCDYSTAQKGNLDQHL 299
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HTG+KPY C QC + +A L HL K
Sbjct: 308 YMCGKCGYRTAQKANLSKHMRKHTGQKPYKCDQCDYAAAQKGNLDQHLMK 357
Score = 43.1 bits (100), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
++C C Y + + H+RTHTGEKPY C QC + +A
Sbjct: 364 YMCGECGYRTAQRSNLSQHLRTHTGEKPYKCDQCDYSAA 402
Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGE+PY C QC + +A + L HL K
Sbjct: 84 YMCGECGYRTAVNANLSRHMRTHTGERPYKCDQCDYSAAQKSTLDNHLVK 133
Score = 39.7 bits (91), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + C CDY + + H H GEKPY C +C +R+A + L+ H+
Sbjct: 383 LRTHTGEKPYKCDQCDYSAAQKQHLIDHQTKHFGEKPYMCEKCGYRAAQRSTLYQHM 439
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGE+ Y C QC + S+ + L H+ K
Sbjct: 196 YMCGECGYRTARKFDLSQHMRTHTGEQNYKCDQCNYSSSRKSHLEQHVAK 245
Score = 36.6 bits (83), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G M H+ T EKPY CG+C +R+A A L H++
Sbjct: 69 GNMGRHVVRRTDEKPYMCGECGYRTAVNANLSRHMR 104
>gi|296231345|ref|XP_002807797.1| PREDICTED: LOW QUALITY PROTEIN: transcriptional repressor CTCF
[Callithrix jacchus]
Length = 726
Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 36.2 bits (82), Expect = 8.1, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|260823108|ref|XP_002604025.1| hypothetical protein BRAFLDRAFT_71686 [Branchiostoma floridae]
gi|229289350|gb|EEN60036.1| hypothetical protein BRAFLDRAFT_71686 [Branchiostoma floridae]
Length = 682
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 31/52 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
++C C Y + + H+RTHTGEKPY C QC + +A GL+ HL K Y
Sbjct: 182 YMCVECGYRAAYKSQISQHMRTHTGEKPYKCDQCDYSAAQKGGLNKHLAKPY 233
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT ++C CDY + + H+R HTGEKPY CG+C +R+ L H++
Sbjct: 365 MRTHSGEKPYMCDQCDYSATEKSHLDRHLRKHTGEKPYMCGECGYRTTQRGHLSRHMR 422
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C AC Y + + + H+RTH+GEKPY C QC + + + L HL+K
Sbjct: 346 FICGACGYRTAHKSDLSRHMRTHSGEKPYMCDQCDYSATEKSHLDRHLRK 395
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + G + H+RTHTG+KPY C QC + +A + L HL K
Sbjct: 402 YMCGECGYRTTQRGHLSRHMRTHTGDKPYKCDQCDYSAAHKSDLDQHLSK 451
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 22/120 (18%)
Query: 79 CKHCHSQLSHLD--LLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCK 136
C + ++ SHLD L H YM C C +T L H RT
Sbjct: 379 CDYSATEKSHLDRHLRKHTGEKPYM------------CGEC-GYRTTQRGHLSRHMRTHT 425
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P++ C CDY + + + H+ H+GEKPY CG+C +R+A L H++
Sbjct: 426 G---DKPYK----CDQCDYSAAHKSDLDQHLSKHSGEKPYMCGECGYRAARKQHLSLHMR 478
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H+R HTGEKPY C QC + +A + L H+KK
Sbjct: 290 YMCGECGHRTAQKSSLSKHMRIHTGEKPYRCDQCGYSAAEKSNLVTHIKK 339
Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGEKPY C QC + +A L HL
Sbjct: 458 YMCGECGYRAARKQHLSLHMRTHTGEKPYKCDQCDYSTAQKGMLDQHL 505
Score = 45.1 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 148 FVCYACDYFSYNIGCMRSHI-RTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CDY + + HI H GEKPY CG+C R+A + L H++
Sbjct: 261 FTCDQCDYSTSLKSNLNRHIGEKHIGEKPYMCGECGHRTAQKSSLSKHMR 310
Score = 40.4 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G M H+ HTGEKPY C +C +R+A + + H++
Sbjct: 167 GYMGGHVVKHTGEKPYMCVECGYRAAYKSQISQHMR 202
Score = 40.0 bits (92), Expect = 0.60, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + G + H+ KPY CG+C +R+A+ + H+K
Sbjct: 201 MRTHTGEKPYKCDQCDYSAAQKGGLNKHL-----AKPYMCGECGYRTATKSRFSRHMK 253
Score = 37.7 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
++C C Y + H++ HTGEK + C QC + ++ + L+ H+ + +
Sbjct: 233 YMCGECGYRTATKSRFSRHMKIHTGEKAFTCDQCDYSTSLKSNLNRHIGEKH 284
>gi|260814490|ref|XP_002601948.1| hypothetical protein BRAFLDRAFT_86432 [Branchiostoma floridae]
gi|229287251|gb|EEN57960.1| hypothetical protein BRAFLDRAFT_86432 [Branchiostoma floridae]
Length = 847
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 143 PFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C CD+ + GC+ HI HTGE+PY CG+C FR+ + LH H+K
Sbjct: 768 PYR----CDQCDFSTAWKGCLTRHIEEHTGERPYLCGECGFRTTK-SNLHRHMK 816
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY++ + +H+ HTGEKPY CG+C +R+ L H+K
Sbjct: 658 YKCDQCDYYTGRRDSLTTHMAKHTGEKPYMCGECGYRTTEKFCLTQHMK 706
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C Y + + + H+R HTGEKPY C QC F +A L H+++
Sbjct: 741 YTCKECGYTTVSQAYLTRHMRVHTGEKPYRCDQCDFSTAWKGCLTRHIEE 790
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 128 LIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSAS 187
L +H +T S +P++ C CDY+S + H R HTG KPY C +C + + S
Sbjct: 701 LTQHMKTHTS----EPYK----CDQCDYYSARKNDLDIHRRKHTGVKPYTCKECGYTTVS 752
Query: 188 VAGLHYHLK 196
A L H++
Sbjct: 753 QAYLTRHMR 761
Score = 44.3 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
FVC C++ S + ++ H +THTGEKPY C QC + ++ L H KT H
Sbjct: 518 FVCEVCEFSSASKHRLQLHKQTHTGEKPYKCDQCDYTASRKVYLARH--KTKH 568
Score = 43.1 bits (100), Expect = 0.069, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
K C C+Y + + G + +H+ HTGE+PY C +C + + L H+ K
Sbjct: 572 KLACSLCEYSTADSGRLSNHMAVHTGERPYKCDKCDYSAVRKDHLKQHMFK 622
Score = 41.2 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + C+ H++THT E PY C QC + SA L H +K
Sbjct: 686 YMCGECGYRTTEKFCLTQHMKTHTSE-PYKCDQCDYYSARKNDLDIHRRK 734
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 136 KSMIRTDPFRHK-FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+ M R P K + C CDY S +++H+ H GEK Y C QC + + L H
Sbjct: 449 RHMFRHLPAEQKPYKCDQCDYSSAQKHYLKAHMVKHGGEKSYKCDQCDYATGWRNRLTTH 508
Query: 195 LKK 197
+ K
Sbjct: 509 MVK 511
Score = 37.7 bits (86), Expect = 2.6, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTG--EKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + ++ H+ H EKPY C QC F +A L H+ K
Sbjct: 601 YKCDKCDYSAVRKDHLKQHMFKHLSAEEKPYKCDQCDFSAAQKVNLKAHMAK 652
>gi|395508337|ref|XP_003758469.1| PREDICTED: transcriptional repressor CTCF [Sarcophilus harrisii]
Length = 728
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 36.2 bits (82), Expect = 8.4, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|260823104|ref|XP_002604023.1| hypothetical protein BRAFLDRAFT_71688 [Branchiostoma floridae]
gi|229289348|gb|EEN60034.1| hypothetical protein BRAFLDRAFT_71688 [Branchiostoma floridae]
Length = 1395
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+R HTGEKPY CG+C +R+A L H++
Sbjct: 111 MRTHTGERPYKCDQCDYSAAQKSTLDQHLRKHTGEKPYICGECGYRTAHKVSLSRHMR 168
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IRT + C CDY + + H HTGEKPY CG+C +R+A + L H++
Sbjct: 1136 IRTHTGERPYKCDQCDYSAAQKSTLEEHQAKHTGEKPYMCGECGYRTAKRSTLSRHIR 1193
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T IRT ++ C CDY + + H HTG+KPY CG+C +R+A + L
Sbjct: 1187 TLSRHIRTHTGERRYKCGQCDYSAARRQYLIDHQTRHTGKKPYMCGECGYRAAQRSTLSQ 1246
Query: 194 HLK 196
H+K
Sbjct: 1247 HMK 1249
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY CG+C FR+ + L H++
Sbjct: 167 MRTHTGEKPYKCDLCDYSAAQKSNLVQHLSQHTGEKPYMCGECGFRATRKSTLLAHMR 224
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + H R H+GE+PY CG+C +R+A + L H++
Sbjct: 1304 MRTHTGEKPYKCDQCDYSASHKHHLIDHQRRHSGERPYICGECGYRAAKKSTLSQHMR 1361
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C Y + + H+RTHTGE+PY C QC + +A + L HL+K
Sbjct: 93 MCGECGYRTAQKSDLTKHMRTHTGERPYKCDQCDYSAAQKSTLDQHLRK 141
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + + H+ H GEKPY CG C +R+A + L H++
Sbjct: 1033 YKCDQCDYSAADKSTLEQHVAKHNGEKPYMCGDCGYRTAYRSHLSRHIR 1081
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 16/85 (18%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRT 169
C C + LN LI+H R RH ++C C Y + + H+RT
Sbjct: 290 CDQCDYSAAEKLN-LIDHQR-----------RHTGERPYMCGECGYRAAQRSTLSQHMRT 337
Query: 170 HTGEKPYACGQCAFRSASVAGLHYH 194
HTGEKPY C QC + +A + L+ H
Sbjct: 338 HTGEKPYKCDQCDYSAARKSTLNKH 362
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H R HTGE+PY CG+C +R+A + L H++
Sbjct: 288 YKCDQCDYSAAEKLNLIDHQRRHTGERPYMCGECGYRAAQRSTLSQHMR 336
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
RTD ++C C Y + + +H+RTHTGE+PY C +C + +A L+ H+ K
Sbjct: 750 RTD--EKPYMCGECGYRTTRKSHLSAHMRTHTGERPYKCDKCDYSAAQKGDLNKHVAK 805
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ ++C C Y + + H++THTGEKPY C QC + +A L HL
Sbjct: 1226 KKPYMCGECGYRAAQRSTLSQHMKTHTGEKPYKCNQCDYSAAKKYKLAEHL 1276
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + HIRTHTGE+PY C QC + +A + L H K
Sbjct: 1117 YICGVCGHRANQKSDLSRHIRTHTGERPYKCDQCDYSAAQKSTLEEHQAK 1166
Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T +R ++C C Y + + + H+RTHTGEKPY C C + +A + L
Sbjct: 134 TLDQHLRKHTGEKPYICGECGYRTAHKVSLSRHMRTHTGEKPYKCDLCDYSAAQKSNLVQ 193
Query: 194 HLKK 197
HL +
Sbjct: 194 HLSQ 197
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HTGE+PY C QC + +A + L H+ K
Sbjct: 1005 YMCVECGYRTDKKSHLSRHMRIHTGERPYKCDQCDYSAADKSTLEQHVAK 1054
Score = 44.3 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGE Y CGQC + +A + HL+K
Sbjct: 1341 YICGECGYRAAKKSTLSQHMRTHTGET-YKCGQCDYSAAHRTSFNRHLRK 1389
Score = 44.3 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + H+RTHTGEKPY C QC + ++ L H ++
Sbjct: 1285 FICEECGYRAARKPDLSRHMRTHTGEKPYKCDQCDYSASHKHHLIDHQRR 1334
Score = 44.3 bits (103), Expect = 0.027, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T ++T + C CDY + + H+ HTGEKP+ C +C +R+A L
Sbjct: 1243 TLSQHMKTHTGEKPYKCNQCDYSAAKKYKLAEHLTIHTGEKPFICEECGYRAARKPDLSR 1302
Query: 194 HLK 196
H++
Sbjct: 1303 HMR 1305
Score = 44.3 bits (103), Expect = 0.030, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C CDY + + H+ HTGEKPY CG+C +R+ L H+
Sbjct: 232 YKCDQCDYSAGQKCDLDKHLVKHTGEKPYMCGECGYRANYKVSLSQHM 279
Score = 43.9 bits (102), Expect = 0.033, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
++C C Y + + HIRTHTGE+ Y CGQC + +A
Sbjct: 1173 YMCGECGYRTAKRSTLSRHIRTHTGERRYKCGQCDYSAA 1211
Score = 43.1 bits (100), Expect = 0.060, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + +H+R HTGE+PY C QC + + L HL K
Sbjct: 204 YMCGECGFRATRKSTLLAHMRIHTGERPYKCDQCDYSAGQKCDLDKHLVK 253
Score = 43.1 bits (100), Expect = 0.067, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + HIR HTGE+P C QC + +A + L H+ K
Sbjct: 1061 YMCGDCGYRTAYRSHLSRHIRIHTGERPLQCDQCGYSAAHKSTLEQHVAK 1110
Score = 42.0 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 27/58 (46%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IR C C Y + + + H+ H+GEKPY CG C R+ + L H++
Sbjct: 1080 IRIHTGERPLQCDQCGYSAAHKSTLEQHVAKHSGEKPYICGVCGHRANQKSDLSRHIR 1137
Score = 39.7 bits (91), Expect = 0.67, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+ HTGEKPY C QC + +A L H ++
Sbjct: 260 YMCGECGYRANYKVSLSQHMSIHTGEKPYKCDQCDYSAAEKLNLIDHQRR 309
Score = 37.4 bits (85), Expect = 3.6, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G M H+ HTG+KPY C +C +R+ + L H++
Sbjct: 990 GDMGRHVVKHTGDKPYMCVECGYRTDKKSHLSRHMR 1025
Score = 37.0 bits (84), Expect = 5.0, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G M H+ T EKPY CG+C +R+ + L H++
Sbjct: 741 GNMGRHVVRRTDEKPYMCGECGYRTTRKSHLSAHMR 776
>gi|31044459|ref|NP_851839.1| transcriptional repressor CTCF [Mus musculus]
gi|30172804|sp|Q61164.2|CTCF_MOUSE RecName: Full=Transcriptional repressor CTCF; AltName: Full=11-zinc
finger protein; AltName: Full=CCCTC-binding factor;
AltName: Full=CTCFL paralog
gi|28204911|gb|AAH46398.1| CCCTC-binding factor [Mus musculus]
gi|29165754|gb|AAH49131.1| CCCTC-binding factor [Mus musculus]
gi|34849682|gb|AAH58240.1| CCCTC-binding factor [Mus musculus]
gi|148679345|gb|EDL11292.1| CCCTC-binding factor, isoform CRA_a [Mus musculus]
gi|148679346|gb|EDL11293.1| CCCTC-binding factor, isoform CRA_a [Mus musculus]
gi|148679350|gb|EDL11297.1| CCCTC-binding factor, isoform CRA_a [Mus musculus]
Length = 736
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 36.2 bits (82), Expect = 8.5, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|363733414|ref|XP_420580.3| PREDICTED: RE1-silencing transcription factor [Gallus gallus]
Length = 893
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 43/112 (38%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C K +R
Sbjct: 219 CDRCGY-----NTNRYDHYLAHLKHHNKAGENERVYKCTICTYTTVSEYHWKKHLRNHFP 273
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C YFS HIRTHTGE+PY C C + S+ L H++
Sbjct: 274 RKVYTCSQCSYFSDRKNNYIQHIRTHTGERPYQCAMCPYSSSQKTHLTRHMR 325
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCK--AVLSTNLNELIEH 131
KH H++ + + C C+Y + + N F C + S N I+H
Sbjct: 237 KH-HNKAGENERVYKCTICTYTTVSEYHWKKHLRNHFPRKVYTCSQCSYFSDRKNNYIQH 295
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
IRT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 296 -------IRTHTGERPYQCAMCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 348
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 349 TRHARQVHN 357
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 19/124 (15%)
Query: 77 SLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTC 135
++C + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 308 AMCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR-- 353
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ P C CDY + + + H+ H + + C C + ++ L YH+
Sbjct: 354 --QVHNGP--KPLTCPHCDYKTADRSNFKKHVELHVNPRQFLCPVCDYAASKKCNLQYHI 409
Query: 196 KKTY 199
K +
Sbjct: 410 KSRH 413
>gi|291390326|ref|XP_002711662.1| PREDICTED: CCCTC-binding factor [Oryctolagus cuniculus]
Length = 728
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 36.2 bits (82), Expect = 8.5, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|260823132|ref|XP_002604037.1| hypothetical protein BRAFLDRAFT_57763 [Branchiostoma floridae]
gi|229289362|gb|EEN60048.1| hypothetical protein BRAFLDRAFT_57763 [Branchiostoma floridae]
Length = 483
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 11/83 (13%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C Y +AVL ++L+ + +S P++ C CDY + + + SH+R HTGE
Sbjct: 222 CGY-RAVLKSDLSRHL------RSHTGEKPYK----CDQCDYSAAHKSNLDSHLRKHTGE 270
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
KPY CG+C +R+A A L H+K
Sbjct: 271 KPYLCGECGYRAARKANLFLHMK 293
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 17/100 (17%)
Query: 114 CIYCKAVLSTNLNELIEH-------CRTC--KSMIRTDPFRH--------KFVCYACDYF 156
C Y A+ S +N + +H C C ++++++D RH + C CDY
Sbjct: 82 CDYSAALKSNLVNHIRKHTGEKPCMCGECGYRTILKSDLSRHLVTHTGEKPYKCDQCDYS 141
Query: 157 SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ + SHI HTG+KP+ CG+C +R+A L H+K
Sbjct: 142 AARKHNLDSHITQHTGDKPFTCGECGYRTAQRCKLSLHMK 181
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+R HTGEKPY CG C +R+ + L HL+
Sbjct: 189 YKCDQCDYSAAYKSNLDKHLRKHTGEKPYMCGDCGYRAVLKSDLSRHLR 237
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++T + C CDY + + H HTGEKPY CG+C +R+A + L H++
Sbjct: 292 MKTHTGERPYKCDQCDYSAAQKSNLDQHQAKHTGEKPYMCGECGYRAARKSKLLVHMR 349
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R+HTGEKPY C QC + +A + L HL+K
Sbjct: 217 YMCGDCGYRAVLKSDLSRHLRSHTGEKPYKCDQCDYSAAHKSNLDSHLRK 266
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGE+PY C QC + +A + L H+ K
Sbjct: 329 YMCGECGYRAARKSKLLVHMRTHTGERPYKCEQCGYSAAQKSNLDEHVAK 378
Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C Y + + H+ HTGEKPY CG+C +R+ + L H++
Sbjct: 348 MRTHTGERPYKCEQCGYSAAQKSNLDEHVAKHTGEKPYICGECGYRAIRKSKLVIHMR 405
Score = 42.4 bits (98), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + C CDY + + +HIR HTGEKP CG+C +R+ + L HL
Sbjct: 68 MRTHTGEKPYKCDQCDYSAALKSNLVNHIRKHTGEKPCMCGECGYRTILKSDLSRHL 124
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A + L H++K
Sbjct: 49 YICEECGYRADCKAHLFRHMRTHTGEKPYKCDQCDYSAALKSNLVNHIRK 98
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C Y + + H++ HTGEKPY C QC + +A + L HL+K
Sbjct: 161 FTCGECGYRTAQRCKLSLHMKIHTGEKPYKCDQCDYSAAYKSNLDKHLRK 210
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C C+Y + + H HTGEKPY C QC + + + L H++K
Sbjct: 404 MRTHSGEKPYKCDQCEYSATQKCTLDRHCLKHTGEKPYRCDQCGYSATKKSNLVNHIRK 462
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + + H+RTH+GEKPY C QC + + L H
Sbjct: 385 YICGECGYRAIRKSKLVIHMRTHSGEKPYKCDQCEYSATQKCTLDRH 431
>gi|149699225|ref|XP_001497859.1| PREDICTED: transcriptional repressor CTCF isoform 1 [Equus
caballus]
Length = 727
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 36.2 bits (82), Expect = 8.5, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|149038028|gb|EDL92388.1| CCCTC-binding factor, isoform CRA_a [Rattus norvegicus]
gi|149038029|gb|EDL92389.1| CCCTC-binding factor, isoform CRA_a [Rattus norvegicus]
Length = 738
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 36.2 bits (82), Expect = 8.5, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|431912370|gb|ELK14504.1| Transcriptional repressor CTCF [Pteropus alecto]
Length = 727
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 36.2 bits (82), Expect = 8.5, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|25742638|ref|NP_114012.1| transcriptional repressor CTCF [Rattus norvegicus]
gi|30172732|sp|Q9R1D1.1|CTCF_RAT RecName: Full=Transcriptional repressor CTCF; AltName: Full=11-zinc
finger protein; AltName: Full=CCCTC-binding factor;
AltName: Full=CTCFL paralog
gi|5670340|gb|AAD27869.2|AF133731_1 11-zinc finger protein [Rattus norvegicus]
Length = 737
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 36.2 bits (82), Expect = 8.5, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|326927215|ref|XP_003209788.1| PREDICTED: transcriptional repressor CTCF-like [Meleagris
gallopavo]
Length = 728
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMVMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 35.8 bits (81), Expect = 9.4, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|148679347|gb|EDL11294.1| CCCTC-binding factor, isoform CRA_b [Mus musculus]
Length = 733
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 36.2 bits (82), Expect = 8.5, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|426382551|ref|XP_004057868.1| PREDICTED: transcriptional repressor CTCF isoform 2 [Gorilla
gorilla gorilla]
Length = 728
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 36.2 bits (82), Expect = 8.6, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|281340291|gb|EFB15875.1| hypothetical protein PANDA_006942 [Ailuropoda melanoleuca]
Length = 728
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 36.2 bits (82), Expect = 8.6, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|73957275|ref|XP_864432.1| PREDICTED: transcriptional repressor CTCF isoform 2 [Canis lupus
familiaris]
Length = 727
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 36.2 bits (82), Expect = 8.6, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|332227530|ref|XP_003262944.1| PREDICTED: LOW QUALITY PROTEIN: transcriptional repressor CTCF
[Nomascus leucogenys]
Length = 727
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 36.2 bits (82), Expect = 8.7, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|301766124|ref|XP_002918465.1| PREDICTED: transcriptional repressor CTCF-like [Ailuropoda
melanoleuca]
Length = 727
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 36.2 bits (82), Expect = 8.7, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|449268819|gb|EMC79656.1| Transcriptional repressor CTCF [Columba livia]
Length = 725
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 465 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMVMHKRTHTGE 516
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 517 KPYACSHCDKTFRQKQLLDMHF---KRYH 542
Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 329 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 388
Query: 190 GLHYHLK 196
L H++
Sbjct: 389 KLKRHMR 395
Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 363 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 422
Score = 35.8 bits (81), Expect = 9.5, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 285 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 342
Query: 199 Y 199
+
Sbjct: 343 H 343
>gi|30584039|gb|AAP36268.1| Homo sapiens CCCTC-binding factor (zinc finger protein) [synthetic
construct]
gi|60654115|gb|AAX29750.1| CCCTC-binding factor [synthetic construct]
Length = 728
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 36.2 bits (82), Expect = 8.7, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|5729790|ref|NP_006556.1| transcriptional repressor CTCF isoform 1 [Homo sapiens]
gi|114663147|ref|XP_511035.2| PREDICTED: transcriptional repressor CTCF isoform 2 [Pan
troglodytes]
gi|395747987|ref|XP_002826593.2| PREDICTED: transcriptional repressor CTCF [Pongo abelii]
gi|397482030|ref|XP_003812238.1| PREDICTED: transcriptional repressor CTCF [Pan paniscus]
gi|426382549|ref|XP_004057867.1| PREDICTED: transcriptional repressor CTCF isoform 1 [Gorilla
gorilla gorilla]
gi|1706179|sp|P49711.1|CTCF_HUMAN RecName: Full=Transcriptional repressor CTCF; AltName: Full=11-zinc
finger protein; AltName: Full=CCCTC-binding factor;
AltName: Full=CTCFL paralog
gi|924760|gb|AAB07788.1| CTCF [Homo sapiens]
gi|6910966|gb|AAF31318.1| transcriptional repressor CTCF [Homo sapiens]
gi|15679930|gb|AAH14267.1| CCCTC-binding factor (zinc finger protein) [Homo sapiens]
gi|32880173|gb|AAP88917.1| CCCTC-binding factor (zinc finger protein) [Homo sapiens]
gi|61362955|gb|AAX42307.1| CCCTC-binding factor [synthetic construct]
gi|119603548|gb|EAW83142.1| CCCTC-binding factor (zinc finger protein), isoform CRA_a [Homo
sapiens]
gi|123998317|gb|ABM86760.1| CCCTC-binding factor (zinc finger protein) [synthetic construct]
gi|157929070|gb|ABW03820.1| CCCTC-binding factor (zinc finger protein) [synthetic construct]
gi|168279043|dbj|BAG11401.1| transcriptional repressor CTCF [synthetic construct]
gi|410208648|gb|JAA01543.1| CCCTC-binding factor (zinc finger protein) [Pan troglodytes]
gi|410254266|gb|JAA15100.1| CCCTC-binding factor (zinc finger protein) [Pan troglodytes]
gi|410292426|gb|JAA24813.1| CCCTC-binding factor (zinc finger protein) [Pan troglodytes]
gi|410355099|gb|JAA44153.1| CCCTC-binding factor (zinc finger protein) [Pan troglodytes]
Length = 727
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 35.8 bits (81), Expect = 8.8, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|417404195|gb|JAA48867.1| Putative transcriptional repressor ctcf [Desmodus rotundus]
Length = 725
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 36.2 bits (82), Expect = 8.7, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|403290501|ref|XP_003936352.1| PREDICTED: transcriptional repressor CTCF [Saimiri boliviensis
boliviensis]
Length = 727
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 35.8 bits (81), Expect = 8.8, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|355710297|gb|EHH31761.1| CCCTC-binding factor [Macaca mulatta]
gi|355763891|gb|EHH62222.1| CCCTC-binding factor [Macaca fascicularis]
gi|380808904|gb|AFE76327.1| transcriptional repressor CTCF isoform 1 [Macaca mulatta]
gi|383415263|gb|AFH30845.1| transcriptional repressor CTCF isoform 1 [Macaca mulatta]
gi|384944858|gb|AFI36034.1| transcriptional repressor CTCF isoform 1 [Macaca mulatta]
Length = 727
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 35.8 bits (81), Expect = 8.8, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|348572570|ref|XP_003472065.1| PREDICTED: LOW QUALITY PROTEIN: transcriptional repressor CTCF-like
[Cavia porcellus]
Length = 728
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 35.8 bits (81), Expect = 8.8, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|344290683|ref|XP_003417067.1| PREDICTED: transcriptional repressor CTCF-like [Loxodonta africana]
Length = 726
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 53.1 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 35.8 bits (81), Expect = 8.8, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|241714213|ref|XP_002413501.1| transcriptional repressor CTCF, putative [Ixodes scapularis]
gi|215507315|gb|EEC16809.1| transcriptional repressor CTCF, putative [Ixodes scapularis]
Length = 629
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C C+A +T+ EL+ H R + P R C CDY S + ++ H+R HTGE
Sbjct: 158 CKECEAAFTTS-GELVRHVRYRHT--HEKPHR----CTECDYASVELSKLKRHMRCHTGE 210
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
+PY C C + S L HL+
Sbjct: 211 RPYQCPHCTYASPDTYKLKRHLR 233
Score = 36.2 bits (82), Expect = 7.5, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGL 191
T K +++ F C C Y S + + SH+ HT +KP+ C +C AFR +
Sbjct: 313 TYKVHVKSHEGEKCFKCDLCPYASISQRHLESHMLIHTDQKPFRCDECDQAFRQKQLLKR 372
Query: 192 HYHLKKTYH 200
H K YH
Sbjct: 373 H---KNLYH 378
>gi|326918773|ref|XP_003205662.1| PREDICTED: RE1-silencing transcription factor-like [Meleagris
gallopavo]
Length = 893
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 43/112 (38%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C K +R
Sbjct: 219 CDRCGY-----NTNRYDHYLAHLKHHNKAGENERVYKCTICTYTTVSEYHWKKHLRNHFP 273
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C YFS HIRTHTGE+PY C C + S+ L H++
Sbjct: 274 RKVYTCSQCSYFSDRKNNYIQHIRTHTGERPYQCAMCPYSSSQKTHLTRHMR 325
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCK--AVLSTNLNELIEH 131
KH H++ + + C C+Y + + N F C + S N I+H
Sbjct: 237 KH-HNKAGENERVYKCTICTYTTVSEYHWKKHLRNHFPRKVYTCSQCSYFSDRKNNYIQH 295
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
IRT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 296 -------IRTHTGERPYQCAMCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 348
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 349 TRHARQVHN 357
Score = 40.4 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 19/124 (15%)
Query: 77 SLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTC 135
++C + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 308 AMCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR-- 353
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ P C CDY + + + H+ H + + C C + ++ L YH+
Sbjct: 354 --QVHNGP--KPLTCPHCDYKTADRSNFKKHVELHVNPRQFLCPVCDYAASKKCNLQYHI 409
Query: 196 KKTY 199
K +
Sbjct: 410 KSRH 413
>gi|260832646|ref|XP_002611268.1| hypothetical protein BRAFLDRAFT_73337 [Branchiostoma floridae]
gi|229296639|gb|EEN67278.1| hypothetical protein BRAFLDRAFT_73337 [Branchiostoma floridae]
Length = 244
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + G + H THTGEKPY CG+C +R+A+ + L H++
Sbjct: 142 YKCDECDYAAARKGSLEQHKATHTGEKPYMCGECGYRTATRSSLTVHMR 190
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTG KPY C QC + +A L H+ K
Sbjct: 170 YMCGECGYRTATRSSLTVHMRTHTGVKPYKCDQCDYSAALKGNLDKHMTK 219
Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 25/51 (49%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+F C C+Y + + H R HTGEKPY C QC + L H+ K
Sbjct: 85 RFACTECEYRAAFKSHLLIHKRKHTGEKPYKCDQCDYSPTQKGNLDKHMTK 135
Score = 36.6 bits (83), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+ C CDY G + H+ HTG K Y C +C + +A L H
Sbjct: 114 YKCDQCDYSPTQKGNLDKHMTKHTGVKNYKCDECDYAAARKGSLEQH 160
>gi|440905441|gb|ELR55818.1| Transcriptional repressor CTCF [Bos grunniens mutus]
Length = 728
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 35.8 bits (81), Expect = 9.4, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|347582670|ref|NP_001231589.1| CCCTC-binding factor (zinc finger protein) [Sus scrofa]
Length = 727
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 35.8 bits (81), Expect = 9.4, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|432093622|gb|ELK25604.1| Transcriptional repressor CTCF [Myotis davidii]
Length = 728
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 35.8 bits (81), Expect = 9.5, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|410983713|ref|XP_003998182.1| PREDICTED: transcriptional repressor CTCF [Felis catus]
Length = 727
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 35.8 bits (81), Expect = 9.5, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|390344496|ref|XP_783939.3| PREDICTED: uncharacterized protein LOC578691 [Strongylocentrotus
purpuratus]
Length = 2085
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YCK V + + L H R+ ++ P++ C CDY S + + H+RTH+GE
Sbjct: 942 CKYCKKVFPFS-STLKVHTRSHMGLM---PYK----CMLCDYASADKSTLVRHMRTHSGE 993
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTYH 200
+PY+C C F + A H++K ++
Sbjct: 994 RPYSCKVCDFAFTTKANCERHVRKRHN 1020
Score = 39.7 bits (91), Expect = 0.70, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 27/60 (45%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
R F K C C I +R HI THTG KPY C QC ++ + H+ + +
Sbjct: 1484 RGTKFESKQCCPYCGRRFPWISSLRRHILTHTGLKPYQCPQCGANFSTKSNCERHIVRRH 1543
Score = 36.2 bits (82), Expect = 7.9, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
++SHIR+HT E+PY C C A L H+ + ++
Sbjct: 1243 LKSHIRSHTNERPYRCHLCQAAFTMKANLEAHIVRRHN 1280
>gi|395853899|ref|XP_003799436.1| PREDICTED: transcriptional repressor CTCF [Otolemur garnettii]
Length = 727
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 35.8 bits (81), Expect = 9.4, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|260832614|ref|XP_002611252.1| hypothetical protein BRAFLDRAFT_119658 [Branchiostoma floridae]
gi|229296623|gb|EEN67262.1| hypothetical protein BRAFLDRAFT_119658 [Branchiostoma floridae]
Length = 2406
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 136 KSMIRTDPFRHKFV----CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
KS ++ RH+ V C+ CDY + G + H+ HTG+KPY CG+C +R+A + L
Sbjct: 839 KSNLKMHIRRHRGVKPYKCHQCDYSAATKGALDQHMAKHTGDKPYQCGECGYRTACRSNL 898
Query: 192 HYHLKK 197
H++K
Sbjct: 899 TVHMRK 904
Score = 52.8 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY S G + H+ HTGEKPY CG+C +R+A + L H+K
Sbjct: 199 MRTHTGEKPYKCDQCDYSSARKGNLDRHMAKHTGEKPYMCGECGYRTADRSYLTVHMK 256
Score = 52.8 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY S G + H+ HTGEKPY CG+C +R+A + L H+K
Sbjct: 591 MRTHTGEKPYKCDQCDYSSARKGNLDRHMAKHTGEKPYMCGECGYRTADRSYLTVHMK 648
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 145 RHKFV----CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
RHK V C+ CD+ + G + H+ HTG+KPY CG+C +R+A + L H++K
Sbjct: 1335 RHKGVQPYKCHQCDFSAAQKGDLDQHMAKHTGDKPYLCGECGYRTARRSNLTVHMRK 1391
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDYF+ + H+ HTGEKPY CG+C +R+A L H++
Sbjct: 1792 MRTHTGVKPYKCDQCDYFTTRKSNLDRHMAKHTGEKPYMCGECGYRTAGHTTLTRHMR 1849
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + G + H+ HTGEKPY CG+C +R+A + L H++
Sbjct: 1745 YKCDQCDYSATQKGNLDRHMAKHTGEKPYMCGECGYRTADRSALTVHMR 1793
Score = 49.7 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + G + H+ HTGEKPY CG+C R+A + L H++
Sbjct: 2317 LRTHSGVKPYKCGQCDYSTARKGHLDIHMTKHTGEKPYVCGECGHRTARKSALSRHMR 2374
Score = 49.7 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 136 KSMIRTDPFRHKFV----CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
KS + T RH V C CDY + + H+ HTGEKPY CG+C FR+A L
Sbjct: 1130 KSSLVTHMKRHTGVKPYKCDQCDYSATEKSSLDRHMTRHTGEKPYMCGECGFRTAHRCNL 1189
Query: 192 HYHLK 196
H++
Sbjct: 1190 TVHMR 1194
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C CDY + + H+ HTGEKPY CG+C +R+A + L H++K
Sbjct: 314 MRTHTGVKPYKCDLCDYSTTQKCHLDEHMAKHTGEKPYMCGECGYRTAVRSNLSVHMRK 372
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C CDY + + H+ HTGEKPY CG+C +R+A + L H++K
Sbjct: 706 MRTHTGVKPYKCDLCDYSTTQKCHLDEHMAKHTGEKPYMCGECGYRTAVRSNLSVHMRK 764
Score = 49.3 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + H+RTHTGEKPY C QCA+ +A L H+ K
Sbjct: 1939 FMCGECGYRTARKSDLSRHMRTHTGEKPYKCDQCAYSAARKGHLDRHIAK 1988
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C C++ + G + H+ HTGEKPY CG+C +R+A L H+ K
Sbjct: 1249 MRTHAGEKPYKCDQCNFSAAKEGNLDQHMTKHTGEKPYMCGECGYRTARKPNLSRHMVK 1307
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 151 YACDYFSYNI---GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
Y CD+ Y+ G + H+ THTGEKPY CG+C +R+A + L H++
Sbjct: 2188 YKCDHCGYSAALKGNLDRHMATHTGEKPYICGECGYRTAHRSQLSAHMR 2236
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C Y + + + H+RTHTGEKPY C QC + SA L H+ K
Sbjct: 180 LLCGECGYRTADRSSLTVHMRTHTGEKPYKCDQCDYSSARKGNLDRHMAK 229
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C Y + + + H+RTHTGEKPY C QC + SA L H+ K
Sbjct: 572 LLCGECGYRTADRSSLTVHMRTHTGEKPYKCDQCDYSSARKGNLDRHMAK 621
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A L H+ K
Sbjct: 1829 YMCGECGYRTAGHTTLTRHMRTHTGEKPYKCDQCEYSAAMKGNLDQHMAK 1878
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C++ + G + H+ HTGEKPY CG+C +R+A L H+ K
Sbjct: 379 YKCDLCNFSAAQKGNLDQHMAKHTGEKPYMCGECGYRAAHKPNLSRHMVK 428
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C Y + + + H+RTH GEKPY C QC F +A L H+ K
Sbjct: 1230 YKCGDCGYRTADRSSLTRHMRTHAGEKPYKCDQCNFSAAKEGNLDQHMTK 1279
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C CDY + G + H+ HTGEKP+ CG+C +R+ + L H+
Sbjct: 2132 YKCDECDYAATQKGNLDRHMTKHTGEKPFMCGECEYRTVDKSSLTRHM 2179
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+F+C C Y + + + H+RTHTGEKP C QC + +A + L H+ K
Sbjct: 123 RFMCVECGYRTAHKSHLSVHMRTHTGEKPTKCDQCDYSTAHKSHLDRHMAK 173
Score = 45.8 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+FVC C Y + + + H R HTGEKPY C QC + + L H+ K
Sbjct: 2075 RFVCTECGYRAASRSHLLVHARKHTGEKPYKCDQCDYSATQKGNLDQHMAK 2125
Score = 45.1 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C CDY + ++ H+ HTG KP CG+C +R+ + L H++K
Sbjct: 1010 FKCDQCDYAAAQKRHLKRHMTKHTGNKPLMCGECGYRTTDASYLTTHMRK 1059
Score = 44.7 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + H+ HT KPY CG C +R+A + L H++
Sbjct: 1193 MRTHTGEKSYKCDQCDYSATHKHSLDLHVAKHTDNKPYKCGDCGYRTADRSSLTRHMR 1250
Score = 43.9 bits (102), Expect = 0.034, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + + H+RTH+G KPY CGQC + +A L H+ K
Sbjct: 2298 YMCGECGFRTADKSYLTIHLRTHSGVKPYKCGQCDYSTARKGHLDIHMTK 2347
Score = 43.5 bits (101), Expect = 0.043, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+C C Y + + + +H+R HTGEKP+ C QC + +A + L H+
Sbjct: 1038 LMCGECGYRTTDASYLTTHMRKHTGEKPFRCDQCDYSAAQKSNLDQHM 1085
Score = 43.5 bits (101), Expect = 0.046, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
FVC C Y + + + HIR H G +PY C QC F +A L H+ K
Sbjct: 1314 FVCGECGYKTAHKSNLTKHIRRHKGVQPYKCHQCDFSAAQKGDLDQHMAK 1363
Score = 43.5 bits (101), Expect = 0.047, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+F C CDY + + + H R HTGE+PY C QC + + L H
Sbjct: 1489 RFACTECDYRAASDANLLIHARKHTGEQPYKCDQCDYSATQKGNLDQH 1536
Score = 43.5 bits (101), Expect = 0.051, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H++THTG KPY C QC + +A + L H+ K
Sbjct: 236 YMCGECGYRTADRSYLTVHMKTHTGVKPYKCDQCDYAAAQKSNLDRHMTK 285
Score = 43.5 bits (101), Expect = 0.051, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H++THTG KPY C QC + +A + L H+ K
Sbjct: 628 YMCGECGYRTADRSYLTVHMKTHTGVKPYKCDQCDYAAAQKSNLDRHMTK 677
Score = 43.5 bits (101), Expect = 0.053, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C Y++ + H R HTGEKP+ C QC + +A L H+ K
Sbjct: 982 FACTECGYWAAAKADLIKHTRKHTGEKPFKCDQCDYAAAQKRHLKRHMTK 1031
Score = 43.5 bits (101), Expect = 0.054, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + +H+RTHTG KPY C C + +A L H+ K
Sbjct: 2216 YICGECGYRTAHRSQLSAHMRTHTGVKPYKCDHCDYSAARKRNLDRHISK 2265
Score = 43.1 bits (100), Expect = 0.058, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+RTHTG KPY C QC + + + L H+ K
Sbjct: 1773 YMCGECGYRTADRSALTVHMRTHTGVKPYKCDQCDYFTTRKSNLDRHMAK 1822
Score = 43.1 bits (100), Expect = 0.060, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 31/67 (46%)
Query: 131 HCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAG 190
H + +RT + C CDY + + HI H GEKPY C QC + +A
Sbjct: 2227 HRSQLSAHMRTHTGVKPYKCDHCDYSAARKRNLDRHISKHVGEKPYKCDQCDYSAARKVY 2286
Query: 191 LHYHLKK 197
L+ H+ K
Sbjct: 2287 LYQHMAK 2293
Score = 42.7 bits (99), Expect = 0.093, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 26/51 (50%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
KF+C C Y + + H+RTHTG KPY C C + + L H+ K
Sbjct: 294 KFMCGECGYRTAEKSALTVHMRTHTGVKPYKCDLCDYSTTQKCHLDEHMAK 344
Score = 42.7 bits (99), Expect = 0.093, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 26/51 (50%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
KF+C C Y + + H+RTHTG KPY C C + + L H+ K
Sbjct: 686 KFMCGECGYRTAEKSALTVHMRTHTGVKPYKCDLCDYSTTQKCHLDEHMAK 736
Score = 42.0 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C+Y + + + H+ THTG KPY C C + +A L H+
Sbjct: 2160 FMCGECEYRTVDKSSLTRHMTTHTGVKPYKCDHCGYSAALKGNLDRHM 2207
Score = 42.0 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+VC C + + + H+RTHTG+KPY C QC + S L H+
Sbjct: 2354 YVCGECGHRTARKSALSRHMRTHTGDKPYKCDQCDYSSNDKRCLKKHI 2401
Score = 42.0 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+ HTG+KP+ CG+C +++A + L H+++
Sbjct: 1286 YMCGECGYRTARKPNLSRHMVKHTGDKPFVCGECGYKTAHKSNLTKHIRR 1335
Score = 42.0 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKP---YACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKP + CG+C +R+A + L H++
Sbjct: 264 YKCDQCDYAAAQKSNLDRHMTKHTGEKPFIKFMCGECGYRTAEKSALTVHMR 315
Score = 42.0 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKP---YACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKP + CG+C +R+A + L H++
Sbjct: 656 YKCDQCDYAAAQKSNLDRHMTKHTGEKPFIKFMCGECGYRTAEKSALTVHMR 707
Score = 41.2 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
C CDY + + + H+ HTGEK CG+C +R+A + L H++
Sbjct: 154 CDQCDYSTAHKSHLDRHMAKHTGEKLLLCGECGYRTADRSSLTVHMR 200
Score = 41.2 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
C CDY + + + H+ HTGEK CG+C +R+A + L H++
Sbjct: 546 CDQCDYSTAHKSHLDRHMAKHTGEKLLLCGECGYRTADRSSLTVHMR 592
Score = 40.8 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
G + H+ H GEKP+ CG+C FR+A + L H+K+
Sbjct: 1103 GTLDRHMTEHDGEKPFKCGECEFRTAFKSSLVTHMKR 1139
Score = 40.0 bits (92), Expect = 0.54, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 25/50 (50%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + G + H+ HTGEK Y C +C + + L H+ K
Sbjct: 2104 YKCDQCDYSATQKGNLDQHMAKHTGEKNYKCDECDYAATQKGNLDRHMTK 2153
Score = 39.7 bits (91), Expect = 0.72, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CDY S C SH HT K Y C +C +R+A ++ L H++
Sbjct: 1562 MRTHTGEKPFKCDECDY-SVAKKCEESHKAKHTDAKRYKCVECGYRTAYMSHLSVHMR 1618
Score = 39.7 bits (91), Expect = 0.74, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HTG KPY C C F +A L H+ K
Sbjct: 351 YMCGECGYRTAVRSNLSVHMRKHTGVKPYKCDLCNFSAAQKGNLDQHMAK 400
Score = 39.7 bits (91), Expect = 0.74, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HTG KPY C C F +A L H+ K
Sbjct: 743 YMCGECGYRTAVRSNLSVHMRKHTGVKPYKCDLCNFSAAQKGNLDQHMAK 792
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 23/51 (45%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + H R HTGEKPY C C + +A H+ K
Sbjct: 67 RLECTECDYRPAKKVKLSRHTRKHTGEKPYKCDICDYSAAKKDHFESHMDK 117
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + + H+RTHTGEK Y C QC + + L H+ K
Sbjct: 1174 YMCGECGFRTAHRCNLTVHMRTHTGEKSYKCDQCDYSATHKHSLDLHVAK 1223
Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
RT+P K Y C Y + + H+RTHTGEKP+ C +C + A
Sbjct: 1537 RTNPTGEK--TYLCGYRTAGRSYLSLHMRTHTGEKPFKCDECDYSVA 1581
Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 24/51 (47%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+F C C Y + + H R H G+KPY C QC + + L H+ K
Sbjct: 1716 RFECTECGYRAAFRSHLLIHARKHAGDKPYKCDQCDYSATQKGNLDRHMAK 1766
Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C++ + + +H++ HTG KPY C QC + + + L H+ +
Sbjct: 1118 FKCGECEFRTAFKSSLVTHMKRHTGVKPYKCDQCDYSATEKSSLDRHMTR 1167
Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T +RT + C C+Y + G + H+ H KPY CG+C +R+A + L
Sbjct: 1843 TLTRHMRTHTGEKPYKCDQCEYSAAMKGNLDQHMAKHN--KPYMCGECGYRTAIRSNLSV 1900
Query: 194 HLK 196
H++
Sbjct: 1901 HMR 1903
Score = 37.7 bits (86), Expect = 2.6, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 148 FVCYACDYFSYN-IGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C CDY + + + R R H GEKP C QC + +A + L H+ K
Sbjct: 515 FECTECDYRAASKVKLSRQTTRKHKGEKPTKCDQCDYSTAHKSHLDRHMAK 565
Score = 37.7 bits (86), Expect = 2.6, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + SH+ HT EK + C +C +R+A + L H++
Sbjct: 96 YKCDICDYSAAKKDHFESHMDKHTSEKRFMCVECGYRTAHKSHLSVHMR 144
Score = 37.4 bits (85), Expect = 3.4, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ H KPY CG+C FR+A + L HL+
Sbjct: 2272 YKCDQCDYSAARKVYLYQHMAKHN--KPYMCGECGFRTADKSYLTIHLR 2318
>gi|115496123|ref|NP_001069216.1| transcriptional repressor CTCF [Bos taurus]
gi|426242519|ref|XP_004015120.1| PREDICTED: transcriptional repressor CTCF isoform 1 [Ovis aries]
gi|426242521|ref|XP_004015121.1| PREDICTED: transcriptional repressor CTCF isoform 2 [Ovis aries]
gi|115305202|gb|AAI23742.1| CCCTC-binding factor (zinc finger protein) [Bos taurus]
gi|296477963|tpg|DAA20078.1| TPA: CCCTC-binding factor [Bos taurus]
Length = 727
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 35.8 bits (81), Expect = 9.4, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|260791392|ref|XP_002590713.1| hypothetical protein BRAFLDRAFT_89519 [Branchiostoma floridae]
gi|229275909|gb|EEN46724.1| hypothetical protein BRAFLDRAFT_89519 [Branchiostoma floridae]
Length = 745
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+R HTGEKPY CG+C FR+A + L H++
Sbjct: 668 MRTHTGERPYKCDQCDYSAGQKSTLNQHVRKHTGEKPYMCGECGFRTADRSSLSQHIR 725
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CD+ + + M SH+ HTGEKPY CG+C +R+A + L HL+
Sbjct: 441 MRTHTGERPYKCDQCDFSAAHKNTMDSHLTKHTGEKPYMCGECGYRTADGSSLSRHLR 498
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C C Y + CM H+RTHTGE+PY C QC + + + L+ H++K
Sbjct: 640 MRTHTSEKPYTCEECGYRATQKSCMYRHMRTHTGERPYKCDQCDYSAGQKSTLNQHVRK 698
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CD+ + + M SH HTGEKPY CG+C +R+A + L HL+
Sbjct: 300 VRTHTGERPYKCDQCDFSAAHKSIMDSHQTKHTGEKPYMCGECGYRTADRSSLSRHLR 357
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + ++ H HTGEKPY CG+C +R+A A L H++
Sbjct: 497 LRTHTGEKTYKCDQCDYSAAEKSKLKQHQVKHTGEKPYMCGECGYRTAYKANLSSHMR 554
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC F +A + L+ HL K
Sbjct: 113 YMCDECGYRATRKAHLSQHMRTHTGEKPYKCDQCEFSAAYKSSLYKHLTK 162
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IRT + C CDY + H+ HTGEKPY CG+C +R+A + L H++
Sbjct: 188 IRTHTGDKPYKCDQCDYSAALKSTSHQHVAKHTGEKPYMCGECGYRTAHKSHLSVHMR 245
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + + H+R+HTGEKPY C QC + +A + L H
Sbjct: 56 YMCEECGYRAARKSTLSKHMRSHTGEKPYKCDQCDYSAARKSSLDSH 102
Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + HI HTGEKPY C +C +R+A + L H++
Sbjct: 28 YKCDQCDYSAAVKSTLDQHIAKHTGEKPYMCEECGYRAARKSTLSKHMR 76
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C CDY + + H+ H+GEKPY C +C +++A + L+ H++
Sbjct: 253 YMCDQCDYSAAQKSSLDQHLTKHSGEKPYMCDECGYKTAHKSNLYRHVR 301
Score = 43.1 bits (100), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C++ + + H+ HTGEKPY CG+C +R+A L H++
Sbjct: 132 MRTHTGEKPYKCDQCEFSAAYKSSLYKHLTKHTGEKPYMCGECGYRTAEKCNLSRHIR 189
Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + HIRTHTG+KPY C QC + +A + H H+ K
Sbjct: 169 YMCGECGYRTAEKCNLSRHIRTHTGDKPYKCDQCDYSAALKSTSHQHVAK 218
Score = 42.7 bits (99), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+RTHTGE+PY C QC F +A + HL K
Sbjct: 422 YMCDECGYKAAHKSNLYRHMRTHTGERPYKCDQCDFSAAHKNTMDSHLTK 471
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + + + H+R HTGEKPY C QC + +A + + H
Sbjct: 337 YMCGECGYRTADRSSLSRHLRIHTGEKPYKCDQCDYSAAEKSKIKQH 383
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + + + H+RTHTGEK Y C QC + +A + L H
Sbjct: 478 YMCGECGYRTADGSSLSRHLRTHTGEKTYKCDQCDYSAAEKSKLKQH 524
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
++C C Y + + + H+RTHTGE+PY C QC F +A
Sbjct: 281 YMCDECGYKTAHKSNLYRHVRTHTGERPYKCDQCDFSAA 319
Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C Y S + H+R HTGEKPY C QC + +A + L H+ K
Sbjct: 1 MCGECGYRSAWKSKLSIHMRMHTGEKPYKCDQCDYSAAVKSTLDQHIAK 49
Score = 39.3 bits (90), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
++C C + + + + HIR HTGEKP C QC F SA
Sbjct: 705 YMCGECGFRTADRSSLSQHIRIHTGEKPDKCDQCDFSSA 743
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C CDY + ++ H HTGEKPY C +C + +A L H+
Sbjct: 365 YKCDQCDYSAAEKSKIKQHQVKHTGEKPYMCDRCDYSAAQKISLDSHI 412
Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 136 KSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAG 190
KS I+ +H ++C CDY + + SHI HT +KPY C +C +++A +
Sbjct: 377 KSKIKQHQVKHTGEKPYMCDRCDYSAAQKISLDSHIAAKHTNKKPYMCDECGYKAAHKSN 436
Query: 191 LHYHLK 196
L+ H++
Sbjct: 437 LYRHMR 442
>gi|148679348|gb|EDL11295.1| CCCTC-binding factor, isoform CRA_c [Mus musculus]
Length = 683
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 52.8 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 35.8 bits (81), Expect = 9.8, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|260815060|ref|XP_002602231.1| hypothetical protein BRAFLDRAFT_216704 [Branchiostoma floridae]
gi|229287538|gb|EEN58243.1| hypothetical protein BRAFLDRAFT_216704 [Branchiostoma floridae]
Length = 348
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C+ CDY + + C++ H+ HTGEKPY CG+C +R+A + YH+KK
Sbjct: 197 MRTHTGEKPYSCHLCDYSAGSKACLKRHVMAMHTGEKPYMCGECGYRTAHSSHYSYHMKK 256
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + HIRTHTGEKPY C QC + ++ + L HL K
Sbjct: 122 FMCEKCGYRTVGWSQLSQHIRTHTGEKPYKCDQCDYSASVKSSLDTHLAK 171
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 10/98 (10%)
Query: 99 SYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSY 158
S +R + N C YC A EL +H T +M +T ++C C Y +
Sbjct: 55 SRHMRKHENPYKCHQCDYCTA----RKYELDKHISTKHTMEKT------YLCEECGYRTA 104
Query: 159 NIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
C+ H THTGEKP+ C +C +R+ + L H++
Sbjct: 105 YRSCLTVHKITHTGEKPFMCEKCGYRTVGWSQLSQHIR 142
Score = 40.0 bits (92), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IRT + C CDY + + +H+ HTGEKPY C +C R+ + L H++
Sbjct: 141 IRTHTGEKPYKCDQCDYSASVKSSLDTHLAKHTGEKPYMCEECGHRTITKRSLVRHMR 198
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + + H+RTHTGEKPY C C + + + A L H
Sbjct: 291 YMCEECGYRTIKKHSLVRHMRTHTGEKPYGCHLCDYCAGAKASLKRH 337
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEK-PYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H++ HTGEK PY C +C R+AS + L H++K
Sbjct: 10 YMCGECGYKTADRSYYNKHMKIHTGEKKPYRCDKCDLRTASHSHLSRHMRK 60
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + +H+ HTGEKPY C +C +R+ L H++
Sbjct: 263 YKCDQCDYSAALKSTLDTHLAKHTGEKPYMCEECGYRTIKKHSLVRHMR 311
Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H++ H+GEKPY C QC + +A + L HL K
Sbjct: 235 YMCGECGYRTAHSSHYSYHMKKHSGEKPYKCDQCDYSAALKSTLDTHLAK 284
>gi|327279940|ref|XP_003224713.1| PREDICTED: RE1-silencing transcription factor-like [Anolis
carolinensis]
Length = 900
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 43/112 (38%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C K +R
Sbjct: 218 CDRCGY-----NTNRYDHYLAHLKHHNKAGENEKVYKCTICTYTTISEYHWKKHLRNHFP 272
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C YFS HIRTHTGE+PY C C + S+ L H++
Sbjct: 273 RKVYTCLQCSYFSDRKNNYVQHIRTHTGERPYQCTMCPYSSSQKTHLTRHMR 324
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C+ C + S N ++H IRT + C C Y S + H+RTH+GE
Sbjct: 278 CLQC-SYFSDRKNNYVQH-------IRTHTGERPYQCTMCPYSSSQKTHLTRHMRTHSGE 329
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KP+ C QC++ +++ + H ++ +
Sbjct: 330 KPFKCEQCSYVASNQHEVTRHARQVH 355
Score = 40.0 bits (92), Expect = 0.55, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 19/124 (15%)
Query: 77 SLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTC 135
++C + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 307 TMCPYSSSQKTHLT--RHMRT---------HSGEKPFKCEQCSYV-ASNQHEVTRHAR-- 352
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ P VC C+Y + + + H+ H + + C C + ++ L YH+
Sbjct: 353 --QVHDGP--KPLVCPHCEYKTADRSNFKKHVELHISPRQFLCPVCEYAASKKCNLQYHI 408
Query: 196 KKTY 199
K +
Sbjct: 409 KSRH 412
>gi|91078938|ref|XP_973961.1| PREDICTED: similar to transcriptional repressor CTCF [Tribolium
castaneum]
Length = 679
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C +C + +T+ EL+ H R T HK C C+Y S + ++ HIR HTGE
Sbjct: 268 CKFCDSAFTTS-GELVRHVR----YKHTHEKPHK--CPECEYASVELSKLKRHIRCHTGE 320
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
+PY C C + S L HL+
Sbjct: 321 RPYQCPHCTYASPDTFKLKRHLR 343
Score = 43.9 bits (102), Expect = 0.032, Method: Composition-based stats.
Identities = 38/123 (30%), Positives = 55/123 (44%), Gaps = 17/123 (13%)
Query: 73 TQNHSLCKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEH 131
T+ HS CK C S + +L+ H + +P+ P C Y S L++L H
Sbjct: 263 TKPHS-CKFCDSAFTTSGELVRHVRYKHTHEKPHK----CPECEYA----SVELSKLKRH 313
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
R C + R P++ C C Y S + ++ H+R HTGEKPY C C + L
Sbjct: 314 IR-CHTGER--PYQ----CPHCTYASPDTFKLKRHLRIHTGEKPYECDICKTKFTQSNSL 366
Query: 192 HYH 194
H
Sbjct: 367 KTH 369
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 8/56 (14%)
Query: 150 CYACD---YFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKTYH 200
CY CD Y S + + SH+ HT +KPY C QC +FR + H +L YH
Sbjct: 437 CYKCDLCPYASISARHLESHMLIHTDQKPYHCDQCDQSFRQKQLLKRHQNL---YH 489
>gi|417412333|gb|JAA52556.1| Putative transcriptional repressor ctcf, partial [Desmodus
rotundus]
Length = 694
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 489 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 540
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 541 KPYACSHCDKTFRQKQLLDMHF---KRYH 566
Score = 52.8 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 353 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 412
Query: 190 GLHYHLK 196
L H++
Sbjct: 413 KLKRHMR 419
Score = 45.1 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 387 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 446
>gi|413914787|gb|AFW21372.1| CCCTC-binding factor [Bubalus bubalis]
Length = 727
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDRCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 35.8 bits (81), Expect = 9.4, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|351714107|gb|EHB17026.1| Transcriptional repressor CTCF [Heterocephalus glaber]
Length = 728
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACTHCDKTFRQKQLLDMHF---KRYH 546
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 36.2 bits (82), Expect = 8.5, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|449472476|ref|XP_002196108.2| PREDICTED: transcriptional repressor CTCF [Taeniopygia guttata]
Length = 644
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 355 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 414
Query: 190 GLHYHLK 196
L H++
Sbjct: 415 KLKRHMR 421
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 389 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 448
Score = 37.0 bits (84), Expect = 4.8, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 311 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 368
Query: 199 Y 199
+
Sbjct: 369 H 369
>gi|270003692|gb|EFA00140.1| hypothetical protein TcasGA2_TC002961 [Tribolium castaneum]
Length = 696
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C +C + +T+ EL+ H R T HK C C+Y S + ++ HIR HTGE
Sbjct: 285 CKFCDSAFTTS-GELVRHVR----YKHTHEKPHK--CPECEYASVELSKLKRHIRCHTGE 337
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
+PY C C + S L HL+
Sbjct: 338 RPYQCPHCTYASPDTFKLKRHLR 360
Score = 43.9 bits (102), Expect = 0.036, Method: Composition-based stats.
Identities = 38/123 (30%), Positives = 55/123 (44%), Gaps = 17/123 (13%)
Query: 73 TQNHSLCKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEH 131
T+ HS CK C S + +L+ H + +P+ P C Y S L++L H
Sbjct: 280 TKPHS-CKFCDSAFTTSGELVRHVRYKHTHEKPHK----CPECEYA----SVELSKLKRH 330
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
R C + R P++ C C Y S + ++ H+R HTGEKPY C C + L
Sbjct: 331 IR-CHTGER--PYQ----CPHCTYASPDTFKLKRHLRIHTGEKPYECDICKTKFTQSNSL 383
Query: 192 HYH 194
H
Sbjct: 384 KTH 386
Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 8/56 (14%)
Query: 150 CYACD---YFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKTYH 200
CY CD Y S + + SH+ HT +KPY C QC +FR + H +L YH
Sbjct: 454 CYKCDLCPYASISARHLESHMLIHTDQKPYHCDQCDQSFRQKQLLKRHQNL---YH 506
>gi|260806360|ref|XP_002598052.1| hypothetical protein BRAFLDRAFT_252967 [Branchiostoma floridae]
gi|229283323|gb|EEN54064.1| hypothetical protein BRAFLDRAFT_252967 [Branchiostoma floridae]
Length = 318
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CDY + + H+RTHTGEKPY CG+C FR+A + L H++
Sbjct: 143 MRTHTGEKPFKCDQCDYSATQKSKLSVHMRTHTGEKPYKCGECGFRAALKSDLARHMR 200
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C Y + ++ + +H+RTHTGEKP+ CG+C +R+A A L H++
Sbjct: 256 MRTHTGEKPYKCDQCGYSAADLTNLATHMRTHTGEKPFMCGECGYRAAQRANLSRHMR 313
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + G + H+RTHTG+KPY C QC + +A A L H+
Sbjct: 11 YMCGECGYRTSTKGALSRHMRTHTGDKPYKCDQCDYSAAQRANLDKHI 58
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+RTHTGEKPY C QC + +A + L H++
Sbjct: 237 YMCDECGYRAAQKCDLSKHMRTHTGEKPYKCDQCGYSAADLTNLATHMR 285
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGC-MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY S + C + +H THTG+KPY CG+C +R+A + L H++
Sbjct: 87 MRTHTREKPYKCDQCDY-SAAVKCNLDTHRTTHTGDKPYMCGKCGYRAAQRSTLSKHMR 144
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + HI HTGEKPY CG+C +R+A + L H++
Sbjct: 30 MRTHTGDKPYKCDQCDYSAAQRANLDKHIAAIHTGEKPYMCGECGYRTAEKSTLSIHMR 88
Score = 42.7 bits (99), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+RTHTGEKP+ C QC + + + L H++
Sbjct: 124 YMCGKCGYRAAQRSTLSKHMRTHTGEKPFKCDQCDYSATQKSKLSVHMR 172
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
H HTGEKPY CG+C +R+++ L H++
Sbjct: 1 HRTNHTGEKPYMCGECGYRTSTKGALSRHMR 31
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
++C C Y + + H+RTHT EKPY C QC + +A
Sbjct: 68 YMCGECGYRTAEKSTLSIHMRTHTREKPYKCDQCDYSAA 106
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+RT + C C + + + H+RTHTGEKPY C QC + + + + H
Sbjct: 171 MRTHTGEKPYKCGECGFRAALKSDLARHMRTHTGEKPYKCDQCDYSATQKSSVDIH 226
Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
Query: 121 LSTNLNELIEHCRTC--KSMIRTDPFRH--------KFVCYACDYFSYNIGCMRSHIRT- 169
+ T+ E C C ++ +++D RH + C CDY + + H
Sbjct: 171 MRTHTGEKPYKCGECGFRAALKSDLARHMRTHTGEKPYKCDQCDYSATQKSSVDIHKAAI 230
Query: 170 HTGEKPYACGQCAFRSASVAGLHYHLK 196
H+GEKPY C +C +R+A L H++
Sbjct: 231 HSGEKPYMCDECGYRAAQKCDLSKHMR 257
>gi|260789649|ref|XP_002589858.1| hypothetical protein BRAFLDRAFT_239127 [Branchiostoma floridae]
gi|229275042|gb|EEN45869.1| hypothetical protein BRAFLDRAFT_239127 [Branchiostoma floridae]
Length = 414
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
Query: 137 SMIRTDPFRHKFV--------CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASV 188
SM +++ RHKF C C Y + G +R H RTHTGEKPY CG C FR+A
Sbjct: 335 SMKKSEITRHKFQHTGVKPYRCDVCGYQTARAGDLRRHERTHTGEKPYMCGVCDFRTADK 394
Query: 189 AGLHYH 194
+ L H
Sbjct: 395 STLSKH 400
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C CDY + + H+RTHTGEKP+ CG C FR+A + H +K
Sbjct: 212 FKCNECDYGTGRRIDFKRHLRTHTGEKPFKCGMCDFRAAMKCNVLRHQQK 261
>gi|291223509|ref|XP_002731752.1| PREDICTED: enhancer binding protein-like [Saccoglossus kowalevskii]
Length = 852
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 50/111 (45%), Gaps = 16/111 (14%)
Query: 95 CKTCSYMIRP-----NANNTFS---PF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFR 145
C C R N +NT + P+ C C+ T+ EL H + I T
Sbjct: 418 CDICGRTFRTSTLLRNHHNTHTGTKPYKCELCERAFGTS-GELARHTK----YIHTHEKP 472
Query: 146 HKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
HK C CDY S ++ H+R+HTGEKP+ C CA+ S L H++
Sbjct: 473 HK--CPLCDYISVESSKIKRHMRSHTGEKPFKCQLCAYASTDNYKLKRHMR 521
Score = 43.9 bits (102), Expect = 0.040, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 11/86 (12%)
Query: 112 PFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHT 171
P C Y +S +++ H R S PF+ C C Y S + ++ H+R HT
Sbjct: 476 PLCDY----ISVESSKIKRHMR---SHTGEKPFK----CQLCAYASTDNYKLKRHMRVHT 524
Query: 172 GEKPYACGQCAFRSASVAGLHYHLKK 197
GEKP+ C C + + L H+ K
Sbjct: 525 GEKPFKCPDCDMAFSQKSSLKEHMWK 550
Score = 40.4 bits (93), Expect = 0.38, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 17/88 (19%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC-----DYFSYNIGCMRSHIR 168
C +C + ++ H R K DP +C C D FSY HI+
Sbjct: 560 CEFCDVTFG-RIADMKAHIR--KMHTPGDPL----ICKVCENGFSDRFSY-----MQHIK 607
Query: 169 THTGEKPYACGQCAFRSASVAGLHYHLK 196
TH GEK Y CGQC + L H++
Sbjct: 608 THRGEKIYKCGQCGYSCPQKRHLLTHMR 635
Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKT 198
I+T + C C Y + +H+R HTGE+PYAC C L +H +KT
Sbjct: 606 IKTHRGEKIYKCGQCGYSCPQKRHLLTHMRVHTGERPYACKDCGESFKHKPTLIHH-EKT 664
Query: 199 YH 200
H
Sbjct: 665 KH 666
>gi|260814474|ref|XP_002601940.1| hypothetical protein BRAFLDRAFT_86424 [Branchiostoma floridae]
gi|229287243|gb|EEN57952.1| hypothetical protein BRAFLDRAFT_86424 [Branchiostoma floridae]
Length = 574
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +R + C CDY + GC+ HI HTGE+PY CG+C FR+ + + LH H+
Sbjct: 484 KKHMRVHTGEKPYRCDQCDYCTAWKGCLTRHIEEHTGERPYLCGECGFRT-TKSNLHRHM 542
Query: 196 K 196
K
Sbjct: 543 K 543
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + C+ +H+ HTGEKP CG+C +R+A L H+K
Sbjct: 382 YMCGECGYRTAQKQCLITHMSKHTGEKPNMCGECGYRAAEKFSLSQHMK 430
Score = 43.5 bits (101), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CD+ + + +H+ HTGEKPY CG+C +R+A L H+ K
Sbjct: 354 YKCDQCDFTTGWRSSLTTHMHVHTGEKPYMCGECGYRTAQKQCLITHMSK 403
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 136 KSMIRTDPFRHK-FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+ M R P K + C CDY S +++H+ H GEKPY C QC + S L H
Sbjct: 115 RHMFRHLPAEQKPYKCDQCDYSSAQKEYLKAHMVKHGGEKPYKCDQCDYSSTQKHYLKAH 174
Query: 195 LKK 197
+ K
Sbjct: 175 MAK 177
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
I T + C CDY + + H R HTGE+PY C +C R+ S + L H++
Sbjct: 431 IHTGVLEKPYKCEQCDYSTAWKNNLDIHRRKHTGERPYMCKECGHRTVSQSDLKKHMR 488
Score = 39.7 bits (91), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + ++ H+R HTGEKPY C QC + +A L H+++
Sbjct: 468 YMCKECGHRTVSQSDLKKHMRVHTGEKPYRCDQCDYCTAWKGCLTRHIEE 517
Score = 39.3 bits (90), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 151 YACDYFSYNIG---CMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
Y CD+ Y+ G + +H+ HTGEKP+ C C F SAS L H
Sbjct: 184 YKCDHCDYSTGWKNALAAHMSVHTGEKPFVCEVCGFSSASKHRLQLH 230
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
FVC C + S + ++ H +THTGEKPY C QC + ++ L H K
Sbjct: 212 FVCEVCGFSSASKHRLQLHKQTHTGEKPYKCDQCDYTASRKVYLARHKTK 261
>gi|260806334|ref|XP_002598039.1| hypothetical protein BRAFLDRAFT_108612 [Branchiostoma floridae]
gi|229283310|gb|EEN54051.1| hypothetical protein BRAFLDRAFT_108612 [Branchiostoma floridae]
Length = 991
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 32/57 (56%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RT + C CDY + N +R H+ HTGEKPY CG+C FR+A L H+K
Sbjct: 726 RTHTGEKPYKCDLCDYSAANKSSLRYHVAKHTGEKPYICGECGFRTAKKYNLTKHMK 782
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 121 LSTNLNELIEHCRTC--KSMIRTDPFRH--------KFVCYACDYFSYNIGCMRSHIRTH 170
LS N +E C C +++ R D ++H F C CDY + + H+ H
Sbjct: 37 LSKNSDERPYMCGECGYRAVKRADLYKHMRKHSGEKPFKCDQCDYSAAQKSTLDQHLTKH 96
Query: 171 TGEKPYACGQCAFRSASVAGLHYHLK 196
TG KPY CG+C + +A + L H+K
Sbjct: 97 TGAKPYICGECGYMTAKSSHLTQHMK 122
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C C +H LD ++++ F C C +T ++ L H
Sbjct: 132 CDQCDYSAAHKATLD-----RHLVKHTGEKPF--VCGKC-GYRTTQMSNLSRH------- 176
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT ++ C CDY + N + H+ HTG+KPY CG+C + + + L HLK
Sbjct: 177 MRTHTGEKQYKCDQCDYSAANKSTLDRHLAKHTGDKPYICGKCGYSTTQMYHLSRHLK 234
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + ++SH+ THT EKPY CG+C +R+A + L H++
Sbjct: 622 YKCDQCDYSAATKSTLQSHLATHTREKPYKCGECGYRTAFKSTLTRHMR 670
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
FVC C Y + + + H+RTHTGEK Y C QC + +A+ + L HL K
Sbjct: 158 FVCGKCGYRTTQMSNLSRHMRTHTGEKQYKCDQCDYSAANKSTLDRHLAK 207
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++++ + C C+Y + + H+R HTGEKPY C QC F SA L+ H+K
Sbjct: 922 NLVKHSGMEKPYKCGECEYATMRQNHLSQHMRKHTGEKPYKCDQCDFCSAYKNALNKHMK 981
Query: 197 K 197
+
Sbjct: 982 Q 982
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ THTG+KPY CG C +R+ + L H +
Sbjct: 669 MRTHTGEKPYKCDQCDYAAPTKTSFKKHVATHTGDKPYKCGDCGYRTVTKFDLTKHRR 726
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C Y + + H+R HTGEKPY C QC + +A+ + L HL
Sbjct: 594 FICKECGYKTTQQYYLSRHMRIHTGEKPYKCDQCDYSAATKSTLQSHL 641
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
F+C C + S + H+RTHTGEKPY C QC + +AS L H
Sbjct: 875 FLCGECGFRSTQRTQLTIHMRTHTGEKPYKCDQCDYSAASRGNLSKH 921
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C Y + + H+RTHTGEKP+ C +C + +A + L YH+ K
Sbjct: 316 LMCGECGYLAPYKSALAMHMRTHTGEKPFKCDRCDYSAARKSQLDYHIAK 365
Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C + + + H++THTGEKPY C QC + +A+ + L +HL
Sbjct: 762 YICGECGFRTAKKYNLTKHMKTHTGEKPYKCDQCDYSAANKSRLDHHL 809
Score = 43.1 bits (100), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++T + C CDY + N + H+ H G+KPY CG+C R+ + L HL+
Sbjct: 781 MKTHTGEKPYKCDQCDYSAANKSRLDHHLAVHRGDKPYMCGECGHRTVTKYDLQKHLR 838
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R H+GEKP+ C QC + +A + L HL K
Sbjct: 46 YMCGECGYRAVKRADLYKHMRKHSGEKPFKCDQCDYSAAQKSTLDQHLTK 95
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C Y + + H RTHTGEKPY C C + +A+ + L YH+ K
Sbjct: 706 YKCGDCGYRTVTKFDLTKHRRTHTGEKPYKCDLCDYSAANKSSLRYHVAK 755
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 148 FVCYACDYFSYNIGCMRSH-IRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + +++H + HTGEKP+ CG+C FRS L H++
Sbjct: 846 YKCDQCDYSATESNHLKTHKLAKHTGEKPFLCGECGFRSTQRTQLTIHMR 895
Score = 40.0 bits (92), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
+RT F C CDY + + HI H GE+PY C +C FR+
Sbjct: 335 MRTHTGEKPFKCDRCDYSAARKSQLDYHIAKHNGEEPYRCKRCGFRT 381
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 20/32 (62%)
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
H+R HTGEKPY C QC F +A + L H K
Sbjct: 390 HMRIHTGEKPYKCDQCDFAAARKSALVEHQAK 421
Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
+ C CD+ + + H HTGEKPY C +C +R+
Sbjct: 400 YKCDQCDFAAARKSALVEHQAKHTGEKPYMCEECGYRT 437
Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H +THTGEKP+ C QC + + L HL K
Sbjct: 428 YMCEECGYRTVHKSYLIVHKKTHTGEKPFKCDQCDYSAVRKCHLDIHLAK 477
Score = 36.2 bits (82), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
++C C + + ++ H+R HTGEKPY C QC +
Sbjct: 818 YMCGECGHRTVTKYDLQKHLRIHTGEKPYKCDQCDY 853
>gi|260810943|ref|XP_002600182.1| hypothetical protein BRAFLDRAFT_66690 [Branchiostoma floridae]
gi|229285468|gb|EEN56194.1| hypothetical protein BRAFLDRAFT_66690 [Branchiostoma floridae]
Length = 489
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 12/80 (15%)
Query: 118 KAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA 177
+A TNL+ ++ I PFR C CDY + + G + H+ HTGEKPY
Sbjct: 188 RAASRTNLSRHMK--------IHLKPFR----CDQCDYSAADKGRLDRHMLKHTGEKPYM 235
Query: 178 CGQCAFRSASVAGLHYHLKK 197
CG+C +R+AS + L H++K
Sbjct: 236 CGECEYRTASRSNLAKHVRK 255
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C CDY + G + H+ THTGEKPY CG+C +R+A L H+++
Sbjct: 309 MRTHTGEKPYKCDQCDYSAAQKGAVDRHMITHTGEKPYMCGECGYRAARKHQLLDHIRR 367
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Query: 121 LSTNLNELIEHCRTC--KSMIRTDPFRH--------KFVCYACDYFSYNIGCMRSH-IRT 169
++ + E C C K+ R+ FRH F C CDY S + H +
Sbjct: 114 MAKHAREKSYKCGECGYKTAHRSSFFRHMEIHSGVKPFKCDQCDYSSVRQSTLDQHMVYR 173
Query: 170 HTGEKPYACGQCAFRSASVAGLHYHLK 196
H+GEKPY CG+C R+AS L H+K
Sbjct: 174 HSGEKPYMCGECGHRAASRTNLSRHMK 200
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + + H+R HTGEKPY CGQC + +A L H+ K
Sbjct: 402 YMCGECGFRTNDKSFLSKHMRRHTGEKPYKCGQCDYSAAHKYSLELHMAK 451
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
VC C + + + M H+RTHTGEKPY C QC + +A + H+
Sbjct: 291 VCGKCGFRTAHKSYMSKHMRTHTGEKPYKCDQCDYSAAQKGAVDRHM 337
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CD+ S +R H+ HTG KP+ CG+C FR+A + + H++
Sbjct: 262 YKCDQCDFSSLYESSLRDHMGRHTGIKPHVCGKCGFRTAHKSYMSKHMR 310
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
IR + C CD+ S C+ H+ H G+KPY CG+C FR+ + L H+++
Sbjct: 365 IRRHTGEKPYKCGLCDFSSSWKKCLDLHMIMHAGDKPYMCGECGFRTNDKSFLSKHMRR 423
Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + HIR HTGEKPY CG C F S+ L H+
Sbjct: 346 YMCGECGYRAARKHQLLDHIRRHTGEKPYKCGLCDFSSSWKKCLDLHM 393
Score = 39.7 bits (91), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C+Y + + + H+R H+ EKPY C QC F S + L H+ +
Sbjct: 234 YMCGECEYRTASRSNLAKHVRKHSSEKPYKCDQCDFSSLYESSLRDHMGR 283
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C Y +Y+ + H+R HT E+PY C QC + +A + H+ K
Sbjct: 67 YQCGECGYRAYDRSYLTKHMRIHTRERPYKCDQCDYAAAYKSFFDRHMAK 116
Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + + H+ HT +KPY C +C +R+A + L H++
Sbjct: 430 YKCGQCDYSAAHKYSLELHMAKHTDDKPYVCSECGYRAAVKSYLSKHMR 478
>gi|260832636|ref|XP_002611263.1| hypothetical protein BRAFLDRAFT_278118 [Branchiostoma floridae]
gi|229296634|gb|EEN67273.1| hypothetical protein BRAFLDRAFT_278118 [Branchiostoma floridae]
Length = 154
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+F C CDY + + H R HTGEKPY CG+C +R+A + L H +K
Sbjct: 64 RFACTECDYRAATKTELLRHTRRHTGEKPYKCGECGYRTADRSALTVHTRK 114
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
+ C CDY + G + H+ THTGEKPY CG+C
Sbjct: 121 YKCDQCDYSAAEKGTLDQHMTTHTGEKPYMCGEC 154
Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C C Y + + + H R HTGE+PY C QC + +A L H+
Sbjct: 93 YKCGECGYRTADRSALTVHTRKHTGERPYKCDQCDYSAAEKGTLDQHM 140
>gi|291401761|ref|XP_002717114.1| PREDICTED: RE1-silencing transcription factor [Oryctolagus
cuniculus]
Length = 930
Score = 53.9 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C + +R
Sbjct: 217 CDRCGY-----NTNRYDHYTAHLKHHTRAGANERVYKCIICTYTTVSEYHWRKHLRNHFP 271
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 272 RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 323
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEH 131
KH H++ + + C C+Y R + N F C S N ++H
Sbjct: 235 KH-HTRAGANERVYKCIICTYTTVSEYHWRKHLRNHFPRKVYTCGKCNYFSDRKNNYVQH 293
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 294 -------VRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 346
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 347 TRHARQVHN 355
Score = 40.8 bits (94), Expect = 0.34, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 307 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR--- 351
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 352 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 408
Query: 197 KTY 199
+
Sbjct: 409 SKH 411
>gi|260823076|ref|XP_002604009.1| hypothetical protein BRAFLDRAFT_119786 [Branchiostoma floridae]
gi|229289334|gb|EEN60020.1| hypothetical protein BRAFLDRAFT_119786 [Branchiostoma floridae]
Length = 786
Score = 53.9 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 133 RTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLH 192
R ++ R PF+ C CDY + + + H+ THTGEKPY CG+C FR+ + L
Sbjct: 663 RHMRTHTRETPFK----CDQCDYSAAHKSTLDEHVTTHTGEKPYMCGECGFRATRKSELS 718
Query: 193 YHLK 196
H++
Sbjct: 719 RHMR 722
Score = 53.1 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + HIR HTGEKPY CG+C FR+A L H++
Sbjct: 198 YKCDQCDYSATEKSSLVKHIRKHTGEKPYMCGECGFRTAMKCNLSVHIR 246
Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + H+RTHTGEKPY C QC + +A L HL K
Sbjct: 282 FMCGECGYRAAQWQHLYRHMRTHTGEKPYKCEQCDYSAAQKGHLDRHLMK 331
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + G + H+ HTGEKP+ C +C +R+A + L H++
Sbjct: 301 MRTHTGEKPYKCEQCDYSAAQKGHLDRHLMKHTGEKPFMCDECGYRTARKSTLIRHMR 358
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IR+ + C C+Y + + + H+ HTG+KP+ CG+C +R+A L+ H++
Sbjct: 245 IRSHTGEKPYKCDQCEYSAAHKSTLDQHLEKHTGQKPFMCGECGYRAAQWQHLYRHMR 302
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 131 HCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAG 190
H T + T ++C C + + + H+RTHTGEKPY C QC + +A
Sbjct: 685 HKSTLDEHVTTHTGEKPYMCGECGFRATRKSELSRHMRTHTGEKPYKCDQCDYSAARKCT 744
Query: 191 LHYHLKK 197
L HL K
Sbjct: 745 LDEHLTK 751
Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 122 STNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
+T + L++H IR ++C C + + + HIR+HTGEKPY C QC
Sbjct: 207 ATEKSSLVKH-------IRKHTGEKPYMCGECGFRTAMKCNLSVHIRSHTGEKPYKCDQC 259
Query: 182 AFRSASVAGLHYHLKK 197
+ +A + L HL+K
Sbjct: 260 EYSAAHKSTLDQHLEK 275
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 47/118 (39%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C C +H LD T +P C C +T +EL H
Sbjct: 676 CDQCDYSAAHKSTLDEHVTTHTGEKPY-------MCGEC-GFRATRKSELSRH------- 720
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKP CG+C +R+ + L H++
Sbjct: 721 MRTHTGEKPYKCDQCDYSAARKCTLDEHLTKHTGEKPNMCGECGYRTTRKSNLSRHMR 778
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
FVC C Y + + H+RTHT +KPY C QC +R+A + L H++
Sbjct: 562 FVCGECGYRAAYRSHISQHMRTHTRDKPYKCDQCGYRTAWKSHLSQHMR 610
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HTGEKPY C QC + + + L H++K
Sbjct: 170 YMCGECGYRTVEKSTLSRHMRIHTGEKPYKCDQCDYSATEKSSLVKHIRK 219
Score = 45.1 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C C Y + + H+RTHTGEKPY C QC + +A + L H+ K
Sbjct: 581 MRTHTRDKPYKCDQCGYRTAWKSHLSQHMRTHTGEKPYKCDQCDYSAAQKSTLDQHVIK 639
Score = 45.1 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ H+GEKPY C C +R+A + L H++
Sbjct: 609 MRTHTGEKPYKCDQCDYSAAQKSTLDQHVIKHSGEKPYNCEMCGYRTAKKSHLSRHMR 666
Score = 43.9 bits (102), Expect = 0.039, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSH-IRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + +H + H+GEKPY CG+C +R+ + L H++
Sbjct: 132 MRTHTGEKPYKCDQCDYSAARKSTLDNHTVAKHSGEKPYMCGECGYRTVEKSTLSRHMR 190
Score = 43.1 bits (100), Expect = 0.070, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C + + + + H+RTHTGEKPY C QC + +A + L H
Sbjct: 113 YMCGECGFRTTHKESLFRHMRTHTGEKPYKCDQCDYSAARKSTLDNH 159
Score = 41.2 bits (95), Expect = 0.24, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ H+ HTGEKPY CG+C FR+ L H++
Sbjct: 100 LNKHLTKHTGEKPYMCGECGFRTTHKESLFRHMR 133
Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
F+C C Y + + H+R+H+GEKP+ C QC F +A L H
Sbjct: 338 FMCDECGYRTARKSTLIRHMRSHSGEKPHKCDQCDFSAAQKHHLINH 384
Score = 39.7 bits (91), Expect = 0.75, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G + H+ H GEKPY CG+C +RS + L H++
Sbjct: 60 GNVERHVVKHMGEKPYRCGECGYRSVQKSDLTKHMR 95
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 24/37 (64%)
Query: 160 IGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IG ++ HTGEKP+ CG+C +R+A + + H++
Sbjct: 546 IGITGMYVVEHTGEKPFVCGECGYRAAYRSHISQHMR 582
>gi|355681360|gb|AER96783.1| CCCTC-binding factor [Mustela putorius furo]
Length = 615
Score = 53.9 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 472 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 523
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 524 KPYACSHCDKTFRQKQLLDMHF---KRYH 549
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 336 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 395
Query: 190 GLHYHLK 196
L H++
Sbjct: 396 KLKRHMR 402
Score = 45.1 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 370 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 429
>gi|340716607|ref|XP_003396788.1| PREDICTED: transcriptional repressor CTCFL-like [Bombus terrestris]
Length = 727
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 15/87 (17%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRT 169
C +C + +T+ EL+ H R +RH C+ CDY S + ++ HIR
Sbjct: 286 CKFCDSAFTTS-GELVRHVR----------YRHTHEKPHKCHECDYASVELSKLKRHIRC 334
Query: 170 HTGEKPYACGQCAFRSASVAGLHYHLK 196
HTGE+PY C C + S L HL+
Sbjct: 335 HTGERPYQCPHCTYASPDTFKLKRHLR 361
Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 150 CYACD---YFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHL 195
CY CD Y S + + SH+ HT +KPY C C +FR + HY+L
Sbjct: 455 CYKCDLCPYASISERHLESHMLIHTDQKPYQCDHCFQSFRQKQLLKRHYNL 505
>gi|383860283|ref|XP_003705620.1| PREDICTED: transcriptional repressor CTCFL-like [Megachile
rotundata]
Length = 716
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 15/87 (17%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRT 169
C +C + +T+ EL+ H R +RH C+ CDY S + ++ HIR
Sbjct: 286 CKFCDSAFTTS-GELVRHVR----------YRHTHEKPHKCHECDYASVELSKLKRHIRC 334
Query: 170 HTGEKPYACGQCAFRSASVAGLHYHLK 196
HTGE+PY C C + S L HL+
Sbjct: 335 HTGERPYQCPHCTYASPDTFKLKRHLR 361
>gi|311262204|ref|XP_003129069.1| PREDICTED: RE1-silencing transcription factor [Sus scrofa]
gi|335293561|ref|XP_003356995.1| PREDICTED: RE1-silencing transcription factor-like [Sus scrofa]
gi|456753171|gb|JAA74113.1| RE1-silencing transcription factor [Sus scrofa]
Length = 1037
Score = 53.9 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C + +R
Sbjct: 217 CDRCGY-----NTNRYDHYAAHLKHHTRAGENERVYRCIICTYTTVSEYHWRKHLRNHFP 271
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 272 RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 323
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEH 131
KH H++ + + C C+Y R + N F C S N ++H
Sbjct: 235 KH-HTRAGENERVYRCIICTYTTVSEYHWRKHLRNHFPRKVYTCGKCNYFSDRKNNYVQH 293
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 294 -------VRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 346
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 347 TRHARQVHN 355
Score = 41.2 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 307 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR--- 351
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 352 -QVHNGP--KPLSCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 408
Query: 197 KTY 199
+
Sbjct: 409 SKH 411
>gi|260832612|ref|XP_002611251.1| hypothetical protein BRAFLDRAFT_261844 [Branchiostoma floridae]
gi|229296622|gb|EEN67261.1| hypothetical protein BRAFLDRAFT_261844 [Branchiostoma floridae]
Length = 586
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + G + H+ THTGEKPY CG+C +R+AS + L H++
Sbjct: 136 YKCDLCDYSAAEKGTLDQHMTTHTGEKPYMCGECGYRTASRSRLSQHMR 184
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+F C CDY + + H R HTGEKPY CG+C +R+A + L H +K
Sbjct: 79 RFACTECDYRAATKTELLRHTRRHTGEKPYKCGECGYRTADRSALTVHTRK 129
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKPY CG+C +R+A + L H++
Sbjct: 192 YKCDQCDYSAAQKSNLDQHMAKHTGEKPYMCGECGYRTAFRSNLSVHMR 240
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C++ + G + H+ TH+GEKPY CG+C +R+A L H+ K
Sbjct: 472 YKCDQCNFSAARKGNLDEHMTTHSGEKPYMCGECGYRTARKPNLSRHMVK 521
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C Y + + H+R HTGEKPY C QC F +A L H+
Sbjct: 444 FMCGDCGYRTAFRSSLSKHMRKHTGEKPYKCDQCNFSAARKGNLDEHM 491
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + H+ HTGEKP+ CG C +R+A + L H++K
Sbjct: 416 YKCDQCDYSATTKSYLDKHMVRHTGEKPFMCGDCGYRTAFRSSLSKHMRK 465
Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+RTHTG KPY C QC + +A + L H+ K
Sbjct: 164 YMCGECGYRTASRSRLSQHMRTHTGVKPYKCDQCDYSAAQKSNLDQHMAK 213
Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKPY CG+C +R+A+ + L H++
Sbjct: 304 YNCDQCDYSAAVKSILDVHMAKHTGEKPYMCGECGYRTANRSYLTVHMR 352
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
FVC C Y + + + HIR H G KPY C QC F +A L H+ K
Sbjct: 528 FVCGECGYKTAHKSNLTKHIRRHRGVKPYKCHQCDFSAAQKGDLDQHMAK 577
Score = 42.7 bits (99), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + N + H+R+HTG KPY C QC + +A + L H+
Sbjct: 332 YMCGECGYRTANRSYLTVHMRSHTGNKPYKCDQCDYSTAQKSNLDRHM 379
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+ HTGEKP+ CG+C +++A + L H+++
Sbjct: 500 YMCGECGYRTARKPNLSRHMVKHTGEKPFVCGECGYKTAHKSNLTKHIRR 549
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+++C C Y + ++ + H+R+HTG KPY C QC + +A + L H+ K
Sbjct: 275 RYMCVECGYRTAHMSYLSVHMRSHTGAKPYNCDQCDYSAAVKSILDVHMAK 325
Score = 40.0 bits (92), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEK Y CG+C +R A L H++
Sbjct: 360 YKCDQCDYSTAQKSNLDRHMAIHTGEKSYMCGECGYRVADKYTLTVHMR 408
Score = 39.7 bits (91), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + SH+ HTGEK Y C +C +R+A ++ L H++
Sbjct: 239 MRTHTGAKPYKCAKCDYSAAKKYHIESHMAKHTGEKRYMCVECGYRTAHMSYLSVHMR 296
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C C Y + + + H R HTGE+PY C C + +A L H+
Sbjct: 108 YKCGECGYRTADRSALTVHTRKHTGERPYKCDLCDYSAAEKGTLDQHM 155
Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTG KPY C +C + +A + H+ K
Sbjct: 220 YMCGECGYRTAFRSNLSVHMRTHTGAKPYKCAKCDYSAAKKYHIESHMAK 269
>gi|260781015|ref|XP_002585624.1| hypothetical protein BRAFLDRAFT_111666 [Branchiostoma floridae]
gi|229270642|gb|EEN41635.1| hypothetical protein BRAFLDRAFT_111666 [Branchiostoma floridae]
Length = 195
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + G + SH+ THTGEKPY CG+C +R+A + L H++
Sbjct: 28 YKCDQCDYSAAQKGHLDSHLATHTGEKPYMCGECGYRTARKSDLSRHMR 76
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CDY + ++ H+ HTG+KPY CG+C +R+A + L H++
Sbjct: 75 MRTHTGEKPFKCDQCDYSAAQKCDLQKHVTKHTGDKPYMCGECGYRAARKSHLSQHMR 132
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KPY CG+C +R+A L H++
Sbjct: 131 MRTHTGEKPYKCDQCDYSATQKSTLDKHVAKHTGDKPYMCGECGYRTARKDSLSQHMR 188
Score = 43.1 bits (100), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + + + L H+ K
Sbjct: 112 YMCGECGYRAARKSHLSQHMRTHTGEKPYKCDQCDYSATQKSTLDKHVAK 161
Score = 43.1 bits (100), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKP+ C QC + +A L H+ K
Sbjct: 56 YMCGECGYRTARKSDLSRHMRTHTGEKPFKCDQCDYSAAQKCDLQKHVTK 105
>gi|395542741|ref|XP_003773284.1| PREDICTED: RE1-silencing transcription factor A-like [Sarcophilus
harrisii]
Length = 918
Score = 53.9 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 43/112 (38%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C K +R
Sbjct: 222 CDRCGY-----NTNRYDHYLAHLKHHNKAGENERVYKCMLCTYTTVSEYHWKKHLRNHFP 276
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ + C C YFS HIRTHTGE+PY C C + S+ L H++
Sbjct: 277 KKVYTCSQCSYFSDRKNNYIQHIRTHTGERPYQCAMCPYSSSQKTHLTRHMR 328
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCK--AVLSTNLNELIEH 131
KH H++ + + C C+Y + + N F C + S N I+H
Sbjct: 240 KH-HNKAGENERVYKCMLCTYTTVSEYHWKKHLRNHFPKKVYTCSQCSYFSDRKNNYIQH 298
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
IRT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 299 -------IRTHTGERPYQCAMCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 351
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 352 TRHARQVHN 360
Score = 41.2 bits (95), Expect = 0.26, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 19/124 (15%)
Query: 77 SLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTC 135
++C + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 311 AMCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR-- 356
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ P C CDY + + + H+ H + + C C + ++ L YH+
Sbjct: 357 --QVHNGP--KPLTCPHCDYKTADRSNFKKHVELHVNPRQFLCPVCDYAASKKCNLQYHI 412
Query: 196 KKTY 199
K +
Sbjct: 413 KSRH 416
>gi|260811171|ref|XP_002600296.1| hypothetical protein BRAFLDRAFT_66799 [Branchiostoma floridae]
gi|229285582|gb|EEN56308.1| hypothetical protein BRAFLDRAFT_66799 [Branchiostoma floridae]
Length = 1557
Score = 53.9 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + N+ + H+R HTGEKPYAC C FR+A + L H++K
Sbjct: 1196 YMCGECGYRTDNMRTLTVHMRKHTGEKPYACSDCEFRTAQKSSLSLHMRK 1245
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 127 ELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRS 185
+L EH RT R P++ C CDY + G + H+ H GEKPY CG+C FR+
Sbjct: 618 KLTEHMRTHIGAKREKPYK----CDQCDYSAAQKGTLDRHVMAKHAGEKPYMCGECGFRT 673
Query: 186 ASVAGLHYHLKK 197
A L H+++
Sbjct: 674 ADRYTLTVHMRR 685
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C CDY + + + H+RTHTGE+PY C QC + + L+ H K
Sbjct: 183 YMCRDCDYRTAHKSALSQHMRTHTGERPYKCDQCDYSATQKNNLNRHRAK 232
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F+C C Y + + + H+R HTG KPY C +C FR+A + L H++
Sbjct: 1307 FMCGECGYRTADKSSLTVHMRKHTGAKPYLCMECGFRTAHSSSLSLHMR 1355
Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKPY CG+C F++A L H++
Sbjct: 374 YKCDQCDYSAAQKSTLDQHMVRHTGEKPYMCGECGFKTAHKFSLSLHMR 422
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
++C C Y + + + H+R HTG KPY CG C +R+A + L+ H+ H
Sbjct: 124 YMCGECGYRTGKMCILTVHMRKHTGVKPYMCGDCGYRAAYRSSLYLHMSTHIH 176
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+++C C Y + + C+ H+RTHTGE+PY C QC + SA G H +
Sbjct: 1032 RYMCGECGYRTADRSCLSKHLRTHTGERPYKCDQCDY-SAVQKGKDEHFSR 1081
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+RT ++C C Y + + + +H+RTHTGEKPY C +C + +A L H
Sbjct: 853 MRTHTGEKPYICRECGYRTAHQFYLLTHMRTHTGEKPYKCDRCDYSAAQKGSLKQH 908
Score = 45.8 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C + + N+ + +H++ HTGEKPY C QC + +A + L H+
Sbjct: 346 YMCEKCGHRTANVSGLTNHMKKHTGEKPYKCDQCDYSAAQKSTLDQHM 393
Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + + H+RTHTGEKPY C QC + +A L H+ K
Sbjct: 1335 YLCMECGFRTAHSSSLSLHMRTHTGEKPYKCDQCDYSAAQKINLVRHIAK 1384
Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + + H+RTHTGEKPY C +C +R+A L H++
Sbjct: 834 YMCGECGYRTNIMSNLTEHMRTHTGEKPYICRECGYRTAHQFYLLTHMR 882
Score = 45.1 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 148 FVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY S + H+ HTGEKP+ CG+C +R+A + L H++K
Sbjct: 1278 YKCDQCDYSSAWKSTLDRHVMAKHTGEKPFMCGECGYRTADKSSLTVHMRK 1328
Score = 44.3 bits (103), Expect = 0.032, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++VC C Y + + +H+R HTGEKPY C QC + SA L H
Sbjct: 288 EYVCEECSYRASGRTDLTNHMRKHTGEKPYKCDQCDYSSAWKNALAQH 335
Score = 43.5 bits (101), Expect = 0.047, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+VC C Y + + + H++ H GEKPY C +C + S + LH H+
Sbjct: 1500 YVCEECGYRTVSRCRLSEHVKIHAGEKPYKCDKCEYSSVRKSTLHRHM 1547
Score = 43.5 bits (101), Expect = 0.050, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H++ HTGEKPY C QC F S L H+ K
Sbjct: 977 YMCEKCGYRTATKSRLSQHMKVHTGEKPYKCDQCDFSSPWKKSLGTHMAK 1026
Score = 43.1 bits (100), Expect = 0.059, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 148 FVCYACDYFSYNIGCMRSH-IRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY S + H + HTGEK Y C +C R+A+V+GL H+KK
Sbjct: 317 YKCDQCDYSSAWKNALAQHKLSKHTGEKLYMCEKCGHRTANVSGLTNHMKK 367
Score = 42.7 bits (99), Expect = 0.075, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CD+ S + +H+ HTGEK Y CG+C +R+A + L HL+
Sbjct: 1005 YKCDQCDFSSPWKKSLGTHMAKHTGEKRYMCGECGYRTADRSCLSKHLR 1053
Score = 41.2 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA--CGQCAFRSASVAGLHYHLK 196
+RT + C CDY + G ++ H HT EKPY+ C +C + +A + L H++
Sbjct: 881 MRTHTGEKPYKCDRCDYSAAQKGSLKQHKAIHTSEKPYSYTCDECGYTTAQRSKLSRHMR 940
Query: 197 K 197
+
Sbjct: 941 R 941
Score = 41.2 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 139 IRTDPFRHKFVCYACDYFSYNI-GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CD SY + G + H+ HTG KPY C +C +R+A + L H+K
Sbjct: 421 MRTHTGEKPYKCDQCD-CSYTVKGHLDRHMAKHTGAKPYMCEECGYRTADKSCLSKHMK 478
Score = 40.8 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C + + + + H+R HTGEKPY C QC + +A +Y L
Sbjct: 664 YMCGECGFRTADRYTLTVHMRRHTGEKPYKCDQCDYSAAQKETFNYKL 711
Score = 39.3 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + + H+RTHTGEKPY C QC L H+ K
Sbjct: 402 YMCGECGFKTAHKFSLSLHMRTHTGEKPYKCDQCDCSYTVKGHLDRHMAK 451
Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKT 198
I T + + C C Y + + H+R HT EKPY C +C + +A + + H+
Sbjct: 911 IHTSEKPYSYTCDECGYTTAQRSKLSRHMRRHTDEKPYKCDECDYSAAWKSSVDRHMADK 970
Query: 199 YH 200
++
Sbjct: 971 HN 972
Score = 37.7 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTG---EKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + + H+RTH G EKPY C QC + +A L H+
Sbjct: 604 YMCGECGYRTGKMPKLTEHMRTHIGAKREKPYKCDQCDYSAAQKGTLDRHV 654
Score = 37.0 bits (84), Expect = 4.0, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CDY + + HI H G KPY CG+C +R+ + L H++K
Sbjct: 99 CDQCDYSAKWKWQLDHHIAKHHG-KPYMCGECGYRTGKMCILTVHMRK 145
Score = 37.0 bits (84), Expect = 4.6, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 151 YACD---YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
Y CD Y S + HI HTG+K Y C +C +R+ S L H+K
Sbjct: 1472 YKCDQGGYSSTGKYALSRHIAKHTGDKTYVCEECGYRTVSRCRLSEHVK 1520
Score = 37.0 bits (84), Expect = 4.8, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 30/68 (44%)
Query: 130 EHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
++ RT +R + C C++ + + H+R H KPY C QC + +A
Sbjct: 1206 DNMRTLTVHMRKHTGEKPYACSDCEFRTAQKSSLSLHMRKHACVKPYKCDQCDYSAAQKI 1265
Query: 190 GLHYHLKK 197
L H+ K
Sbjct: 1266 TLIRHIAK 1273
Score = 35.8 bits (81), Expect = 8.9, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 26/65 (40%)
Query: 131 HCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAG 190
H +RT + C CDY + + H H +KPY C QC + +A
Sbjct: 194 HKSALSQHMRTHTGERPYKCDQCDYSATQKNNLNRHRAKHMDDKPYKCDQCDYSAARKDT 253
Query: 191 LHYHL 195
L H+
Sbjct: 254 LDRHM 258
Score = 35.8 bits (81), Expect = 8.9, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
VC C Y + ++ + H R HT KP C QC + + L +H+ K
Sbjct: 550 VCSQCGYIADSMSSLDVHTRRHTDRKPNKCDQCDYSAKWKWQLDHHIAK 598
Score = 35.8 bits (81), Expect = 9.8, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 131 HCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAG 190
H + +RT + C CDY + + HI H EKPY C QC + +A
Sbjct: 1346 HSSSLSLHMRTHTGEKPYKCDQCDYSAAQKINLVRHIAKHC-EKPYKCDQCDYSAAQKIT 1404
Query: 191 LHYHLKK 197
L+ H+ K
Sbjct: 1405 LNRHMVK 1411
>gi|260808229|ref|XP_002598910.1| hypothetical protein BRAFLDRAFT_122441 [Branchiostoma floridae]
gi|229284185|gb|EEN54922.1| hypothetical protein BRAFLDRAFT_122441 [Branchiostoma floridae]
Length = 2245
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + + H+RTHTGEKPY CG+C FR+A + + H++
Sbjct: 2162 YMCRECGYRTAHKSDLTKHVRTHTGEKPYMCGECGFRTAKKSNISQHMR 2210
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IRT + + C C++ + +R H+ HTGEKPY CG+C +R+A + L H++
Sbjct: 868 IRTHTGQKPYKCEECNFSAAQKSTLRQHLAKHTGEKPYMCGECGYRAAQKSHLSRHMR 925
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + N + H+RTHTGEKP+ C QC + + S + L +H+ K
Sbjct: 65 YMCGECGYRTANTSHLSRHMRTHTGEKPFKCDQCDYSAGSKSSLDFHMAK 114
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 136 KSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
KS +R +H ++C C Y + + H+RTHTG+KP+ C QC F +A + L
Sbjct: 889 KSTLRQHLAKHTGEKPYMCGECGYRAAQKSHLSRHMRTHTGDKPFKCDQCDFSAAQKSSL 948
Query: 192 HYHLKK 197
YHL K
Sbjct: 949 DYHLTK 954
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 10/91 (10%)
Query: 116 YCKAVLSTNLNELIEHCRTC--KSMIRTDPFRH--------KFVCYACDYFSYNIGCMRS 165
Y + T+ + + CR C ++ ++D RH + C CDY + +
Sbjct: 191 YLSIHMRTHTGQNLHMCRECGYRTAYKSDLSRHMRTHTGEKPYKCDLCDYSASRTSTLNK 250
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
H+ HTGEKPY CG C +R+A L H++
Sbjct: 251 HLAKHTGEKPYMCGVCGYRAARKDTLSGHMR 281
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + SH+ HTGEKPY CG+C +R+ + L H++
Sbjct: 1984 MRTHTGEKPYKCDQCDYSAAQKSSLDSHLMKHTGEKPYMCGECGYRTGWKSRLSKHMR 2041
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y +Y + H+RTHTGEKPY C QC + +A L HL
Sbjct: 2106 YMCGECGYRTYQSSNLSRHMRTHTGEKPYKCDQCDYSAAHKYSLDIHL 2153
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+RTHTGEKPY CG+C +R+A + L H++
Sbjct: 2021 YMCGECGYRTGWKSRLSKHMRTHTGEKPYKCGECGYRTAVKSALSIHVR 2069
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY CG+C FR+A + L H++
Sbjct: 1677 MRTHTGEKPYKCDQCDYSAARKSHLDIHLLKHTGEKPYMCGECGFRAAHKSHLSKHMR 1734
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T +RT + C CDY + + H+ HTGEKPY CG+C +++A + L
Sbjct: 1031 TLSKHMRTHTGEKPYKCDQCDYSAVQKSTLDLHLTKHTGEKPYLCGECWYKTAKKSHLSV 1090
Query: 194 HLK 196
H++
Sbjct: 1091 HMR 1093
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A L HL K
Sbjct: 765 YMCEECGYRADRKSTLSRHMRTHTGEKPYKCDQCDYSAAQKYSLDIHLAK 814
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY CG+C +R+ + L H++
Sbjct: 980 MRTHTGEKPYKCDQCDYTTVIKSNLNKHLARHTGEKPYMCGECGYRTTEKSTLSKHMR 1037
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + + + L HL K
Sbjct: 1017 YMCGECGYRTTEKSTLSKHMRTHTGEKPYKCDQCDYSAVQKSTLDLHLTK 1066
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT ++C C + + + H+RTHTGEKPY C QC + +A + L H+ K
Sbjct: 2181 VRTHTGEKPYMCGECGFRTAKKSNISQHMRTHTGEKPYKCDQCDYSAAQKSHLDIHVTK 2239
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A + L HL K
Sbjct: 1965 YMCGECGYRAARKFTLSVHMRTHTGEKPYKCDQCDYSAAQKSSLDSHLMK 2014
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + HIRTHTG+KPY C +C F +A + L HL K
Sbjct: 849 YMCGECGYRATWKSALLQHIRTHTGQKPYKCEECNFSAAQKSTLRQHLAK 898
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
+R + C CDY + N +++H+ HTGEKPY CG+C +R+ + L H++
Sbjct: 2068 VRIHTGEKPYKCDQCDYSAANKSTLKNHLAARHTGEKPYMCGECGYRTYQSSNLSRHMR 2126
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CDY + + + H+ HTGEKPY CG+C +R+A L H +
Sbjct: 84 MRTHTGEKPFKCDQCDYSAGSKSSLDFHMAKHTGEKPYKCGECGYRTALRLDLARHTR 141
Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+RTHTGEKPY C QC + +A + L+ HL K
Sbjct: 1129 YMCGECGYRATHKFDLSIHMRTHTGEKPYKCDQCDYSAAVKSSLNKHLAK 1178
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A + L HL K
Sbjct: 1658 YMCGECGYRTAKKCHLSQHMRTHTGEKPYKCDQCDYSAARKSHLDIHLLK 1707
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 126 NELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
+EL +H S P++ C CDY + + H+ HT +KPY CG+C +R+
Sbjct: 1255 SELSQHILRTHSHTAEKPYK----CDQCDYSATQKNHLDIHLLKHTSQKPYICGECGYRA 1310
Query: 186 ASVAGLHYHL 195
A + L +H+
Sbjct: 1311 AQKSTLDWHI 1320
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 22/120 (18%)
Query: 79 CKHCHSQLSHLD--LLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCK 136
C + ++ SHLD LL H YM C C + + + L +H R
Sbjct: 1691 CDYSAARKSHLDIHLLKHTGEKPYM------------CGEC-GFRAAHKSHLSKHMR--- 1734
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
I T+ +K C CDY + + H HTGEKPY CG+C +R+A L H++
Sbjct: 1735 --IHTEEKPYK--CDQCDYATARKSNLDRHRTKHTGEKPYMCGECGYRTARKFNLSLHVR 1790
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + + + HL K
Sbjct: 261 YMCGVCGYRAARKDTLSGHMRTHTGEKPYKCDQCDYSARHKSSFDIHLAK 310
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CD+ + + H+ H GEKPY CG+C +R+ + L H++
Sbjct: 924 MRTHTGDKPFKCDQCDFSAAQKSSLDYHLTKHAGEKPYMCGECGYRTTYKSDLSKHMR 981
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + H+ HTGEKPY C +C +R+A + L H++
Sbjct: 2125 MRTHTGEKPYKCDQCDYSAAHKYSLDIHLANHTGEKPYMCRECGYRTAHKSDLTKHVR 2182
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT ++ +C C Y + + H+RTHTGEKPY C C + ++ + L+ HL K
Sbjct: 196 MRTHTGQNLHMCRECGYRTAYKSDLSRHMRTHTGEKPYKCDLCDYSASRTSTLNKHLAK 254
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + C C Y + + H+R HTGEKPY C QC + +A+ + L HL
Sbjct: 2040 MRTHTGEKPYKCGECGYRTAVKSALSIHVRIHTGEKPYKCDQCDYSAANKSTLKNHL 2096
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 106 ANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRS 165
+ NT +P+ +T ++L EH T + F C CD+ + +
Sbjct: 505 SRNTQNPYMCGVCGYRTTQKSDLSEHVNT----------HNLFKCDQCDFSAADRYTFIR 554
Query: 166 HIRTHTG-EKPYACGQCAFRSASVAGLHYHLK 196
H+R H+G EKPY CG+C FR+ + L H++
Sbjct: 555 HLRKHSGDEKPYMCGECGFRAEHKSDLSIHMR 586
Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKPY CG+C +R+ + L H++
Sbjct: 821 YQCDQCDYSTARKCDLDKHVTKHTGEKPYMCGECGYRATWKSALLQHIR 869
Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + + + L+ HL +
Sbjct: 961 YMCGECGYRTTYKSDLSKHMRTHTGEKPYKCDQCDYTTVIKSNLNKHLAR 1010
Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HT +KPY CG+C +R+ V+ L H +
Sbjct: 1148 MRTHTGEKPYKCDQCDYSAAVKSSLNKHLAKHTDDKPYMCGECGYRTVQVSTLFEHTQ 1205
Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CDY + + H+ HT EKPY CG+C +++A L H++
Sbjct: 1349 MRTHTGEKPFKCDQCDYSAVRKSTLNIHLAKHTEEKPYMCGECGYKAARKFDLCRHMR 1406
Score = 45.1 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKP+ C QC + + + L+ HL K
Sbjct: 1330 YMCGECGYRAAQKSHLAVHMRTHTGEKPFKCDQCDYSAVRKSTLNIHLAK 1379
Score = 45.1 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHT EKPY C QC + +A L +HL K
Sbjct: 1073 YLCGECWYKTAKKSHLSVHMRTHTREKPYRCDQCDYSAAQKCNLDFHLAK 1122
Score = 45.1 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++ R P+R C CDY + + H+ HTG+KPY CG+C +R+ L H+
Sbjct: 1093 RTHTREKPYR----CDQCDYSAAQKCNLDFHLAKHTGDKPYMCGECGYRATHKFDLSIHM 1148
Query: 196 K 196
+
Sbjct: 1149 R 1149
Score = 44.3 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKPY C +C +R+A + L H++
Sbjct: 1826 YKCDQCDYSAAQKCALVRHLTKHTGEKPYMCEECGYRTALKSTLSKHMR 1874
Score = 44.3 bits (103), Expect = 0.030, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A + L H+ K
Sbjct: 1386 YMCGECGYKAARKFDLCRHMRTHTGEKPYNCDQCDYSAAQKSTLDGHMTK 1435
Score = 43.5 bits (101), Expect = 0.042, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C + + + + H+R HTGEKPY C QC + +A + L HL
Sbjct: 566 YMCGECGFRAEHKSDLSIHMRIHTGEKPYKCDQCNYSAARKSNLQQHL 613
Score = 43.5 bits (101), Expect = 0.044, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 10/75 (13%)
Query: 132 CRTC--KSMIRTDPFRHK--------FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
C C ++ +R D RH + C CDY + + H+ HT E PY CG+C
Sbjct: 123 CGECGYRTALRLDLARHTRTHTGEKPYRCDQCDYATARKASLDDHMTKHTDEMPYMCGEC 182
Query: 182 AFRSASVAGLHYHLK 196
+R+ + L H++
Sbjct: 183 GYRAVRKSYLSIHMR 197
Score = 43.5 bits (101), Expect = 0.050, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 130 EHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASV 188
EH +R + C C+Y + ++ H+ HTGEKPY CG+C +R+A
Sbjct: 576 EHKSDLSIHMRIHTGEKPYKCDQCNYSAARKSNLQQHLAAKHTGEKPYMCGECGYRAARK 635
Query: 189 AGLHYHLK 196
+ L H++
Sbjct: 636 STLSEHMR 643
Score = 43.1 bits (100), Expect = 0.057, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HTGE+PY C QC + + + L HL K
Sbjct: 1770 YMCGECGYRTARKFNLSLHVRIHTGERPYKCDQCDYSAVQKSSLDIHLAK 1819
Score = 43.1 bits (100), Expect = 0.060, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 27/59 (45%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+R + C CDY + + H+ HTG KPY C QC + +A L HL K
Sbjct: 1789 VRIHTGERPYKCDQCDYSAVQKSSLDIHLAKHTGNKPYKCDQCDYSAAQKCALVRHLTK 1847
Score = 43.1 bits (100), Expect = 0.063, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T +RT + C CDY + + H+ HTG+KPY C QC + +A L
Sbjct: 779 TLSRHMRTHTGEKPYKCDQCDYSAAQKYSLDIHLAKHTGQKPYQCDQCDYSTARKCDLDK 838
Query: 194 HLKK 197
H+ K
Sbjct: 839 HVTK 842
Score = 43.1 bits (100), Expect = 0.064, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C Y + + H RTHTGEKPY C QC + +A A L H+ K
Sbjct: 121 YKCGECGYRTALRLDLARHTRTHTGEKPYRCDQCDYATARKASLDDHMTK 170
Score = 43.1 bits (100), Expect = 0.070, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAG 190
++C C Y + + H+RTHTGEKPY C Q A S S G
Sbjct: 623 YMCGECGYRAARKSTLSEHMRTHTGEKPYKCDQKAMASPSCGG 665
Score = 42.0 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 148 FVCYACDYFSYNIGCMRSHI-RTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + HI HTG+KPY CG+C +R+A + L H++
Sbjct: 1301 YICGECGYRAAQKSTLDWHIVAKHTGDKPYMCGECGYRAAQKSHLAVHMR 1350
Score = 42.0 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 135 CKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAG 190
C+ M RT + C CDY + + H+ HTG+KPY CG+C + G
Sbjct: 1402 CRHM-RTHTGEKPYNCDQCDYSAAQKSTLDGHMTKHTGDKPYMCGECGIAEMASCG 1456
Score = 40.0 bits (92), Expect = 0.54, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + + H+R HT EKPY C QC + +A + L H K
Sbjct: 1714 YMCGECGFRAAHKSHLSKHMRIHTEEKPYKCDQCDYATARKSNLDRHRTK 1763
Score = 39.3 bits (90), Expect = 0.90, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ H+ HTG+KPY CG+C +R+A L H++
Sbjct: 1952 LDQHLTKHTGDKPYMCGECGYRAARKFTLSVHMR 1985
Score = 38.9 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+RTHTG+ + C +C +R+A + L H++
Sbjct: 177 YMCGECGYRAVRKSYLSIHMRTHTGQNLHMCRECGYRTAYKSDLSRHMR 225
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 29/81 (35%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGE-----------------------------KPYAC 178
++C C Y + + + H +THTGE KPY C
Sbjct: 1185 YMCGECGYRTVQVSTLFEHTQTHTGEKTQKCDQLYYSAAQKSHSHQHHLAKHSVDKPYMC 1244
Query: 179 GQCAFRSASVAGLHYHLKKTY 199
G+C +R+A + L H+ +T+
Sbjct: 1245 GECGYRAAEYSELSQHILRTH 1265
Score = 36.2 bits (82), Expect = 6.7, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G +++ GEKPY CG+C +R+A+ + L H++
Sbjct: 50 GLLQNKTTDTVGEKPYMCGECGYRTANTSHLSRHMR 85
>gi|307184681|gb|EFN71010.1| Transcriptional repressor CTCF [Camponotus floridanus]
Length = 474
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 15/87 (17%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRT 169
C +C++ +T+ EL+ H R +RH C+ CDY S + ++ HIR
Sbjct: 151 CKFCESAFTTS-GELVRHVR----------YRHTHEKPHKCHECDYASVELSKLKRHIRC 199
Query: 170 HTGEKPYACGQCAFRSASVAGLHYHLK 196
HTGE+PY C C + S L HL+
Sbjct: 200 HTGERPYQCPHCTYASPDTFKLKRHLR 226
>gi|260808227|ref|XP_002598909.1| hypothetical protein BRAFLDRAFT_58822 [Branchiostoma floridae]
gi|229284184|gb|EEN54921.1| hypothetical protein BRAFLDRAFT_58822 [Branchiostoma floridae]
Length = 591
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + G SH+ THTGEKPY CG+C +R+A + L HL+
Sbjct: 330 MRTHTGDRPYKCDLCDYSAAQKGNFDSHLATHTGEKPYMCGECGYRAAHKSDLSRHLR 387
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + G + SH+ HTGEKPY CG+C +R+A + L H++
Sbjct: 470 MRTHTGEKPYKCDQCDYSAAQKGHLDSHLAKHTGEKPYMCGECGYRAAHKSDLSRHMR 527
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + HI HTGEKPY CG+C +R+A + L H++
Sbjct: 131 MRTHTGEKPYKCDQCDYSAARKSTLEDHITKHTGEKPYMCGECGYRTAKKSHLSKHMR 188
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY CG+C +R+A + L H+K
Sbjct: 19 MRTHTGEKPYKCDQCDYSAAQKANLDLHLTKHTGEKPYMCGECGYRAACKSNLSRHMK 76
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + + H+RTHTGEKPY CG+C +R+ + L H++
Sbjct: 367 YMCGECGYRAAHKSDLSRHLRTHTGEKPYECGECGYRTTHKSYLSKHMR 415
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + +H+R HTG KPY CG+C +R+ + L H++
Sbjct: 526 MRTHTGEKPYKCDQCDYSAAHKSNLSNHVRIHTGYKPYMCGECGYRTGRKSDLSRHMR 583
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + M H+ HTGEKPY CG+C +R+A + L+ H++
Sbjct: 414 MRTHTGEKPYKCDQCDYSAALKSNMDIHLLKHTGEKPYMCGECGYRAAHRSDLNRHMR 471
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+RTHTGEKPY C QC + +A L HL K
Sbjct: 451 YMCGECGYRAAHRSDLNRHMRTHTGEKPYKCDQCDYSAAQKGHLDSHLAK 500
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C Y + + H+RTHTGEKPY C QC + +A A L HL K
Sbjct: 1 MCGECGYRTNLKSTLSKHMRTHTGEKPYKCDQCDYSAAQKANLDLHLTK 49
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + + H+RTHTGEKPY C QC + +A + L H++
Sbjct: 507 YMCGECGYRAAHKSDLSRHMRTHTGEKPYKCDQCDYSAAHKSNLSNHVR 555
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + C C Y + + + H+RTHTGEKPY C QC + +A + + HL
Sbjct: 386 LRTHTGEKPYECGECGYRTTHKSYLSKHMRTHTGEKPYKCDQCDYSAALKSNMDIHL 442
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 21/103 (20%)
Query: 95 CKTCSYMIRPNAN--------NTFSPF-CIYC--KAVLSTNLNELIEHCRTCKSMIRTDP 143
C C Y AN P+ C C +A +NL+ R K+ P
Sbjct: 30 CDQCDYSAAQKANLDLHLTKHTGEKPYMCGECGYRAACKSNLS------RHMKTHTGEKP 83
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
F+ C C+Y + + H+ HTGEKPY CG+C R+A
Sbjct: 84 FK----CDQCNYSAAQKSSLDKHLLKHTGEKPYMCGECGLRTA 122
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + HIRTHTGEKP C QC + +A + L+ HL K
Sbjct: 255 YMCDECGYRAARKSDLSIHIRTHTGEKPLKCNQCDYVTAWKSNLNRHLTK 304
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H++THTGEKP+ C QC + +A + L HL
Sbjct: 56 YMCGECGYRAACKSNLSRHMKTHTGEKPFKCDQCNYSAAQKSSLDKHL 103
Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
++C C Y + + H+RTHTGEKPY C Q A +S
Sbjct: 168 YMCGECGYRTAKKSHLSKHMRTHTGEKPYKCDQAAHKS 205
Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 139 IRTDPFRHKFVCYACDY-------FSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C+ CDY + + H+ HTGEKPY C +C +R+A + L
Sbjct: 211 MRTHTGEKPYKCHQCDYVAARKSHLDQHKSHLDQHLTKHTGEKPYMCDECGYRAARKSDL 270
Query: 192 HYHLK 196
H++
Sbjct: 271 SIHIR 275
Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 165 SHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+H+RTHTGEKPY C QC + +A + L H+ K
Sbjct: 129 NHMRTHTGEKPYKCDQCDYSAARKSTLEDHITK 161
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 151 YACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
Y CD ++ + H+RTHTGEKPY C QC + +A + L H
Sbjct: 196 YKCDQAAHKSD-LSMHMRTHTGEKPYKCHQCDYVAARKSHLDQH 238
Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 27/58 (46%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IRT C CDY + + H+ HTG KPY C +C R+A L H++
Sbjct: 274 IRTHTGEKPLKCNQCDYVTAWKSNLNRHLTKHTGAKPYICEECGHRTAHKFNLSVHMR 331
>gi|344247352|gb|EGW03456.1| RE1-silencing transcription factor [Cricetulus griseus]
Length = 1047
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C + +R
Sbjct: 195 CDRCGY-----NTNRYDHYTAHLKHHTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 249
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 250 RKVYTCSKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 301
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEH 131
KH H++ + + C C+Y R + N F C S N ++H
Sbjct: 213 KH-HTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFPRKVYTCSKCNYFSDRKNNYVQH 271
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 272 -------VRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 324
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 325 TRHARQVHN 333
Score = 40.8 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 285 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR--- 329
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 330 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 386
Query: 197 KTY 199
+
Sbjct: 387 SKH 389
>gi|387019077|gb|AFJ51656.1| RE1-silencing transcription factor-like [Crotalus adamanteus]
Length = 890
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 43/112 (38%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C K +R
Sbjct: 221 CDRCGY-----NTNRYDHYLAHLKHHNKAGENERVYKCTICTYTTVSEYHWKKHLRNHFP 275
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C YFS HIRTHTGE+PY C C + S+ L H++
Sbjct: 276 RKVYTCSQCSYFSDRKNNYVQHIRTHTGERPYRCSMCPYSSSQKTHLTRHMR 327
Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 16/128 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCK--AVLSTNLNELIEH 131
KH H++ + + C C+Y + + N F C + S N ++H
Sbjct: 239 KH-HNKAGENERVYKCTICTYTTVSEYHWKKHLRNHFPRKVYTCSQCSYFSDRKNNYVQH 297
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
IRT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 298 -------IRTHTGERPYRCSMCPYSSSQKTHLTRHMRTHSGEKPFKCEQCSYVASNQHEV 350
Query: 192 HYHLKKTY 199
H ++ +
Sbjct: 351 TRHARQVH 358
Score = 40.4 bits (93), Expect = 0.38, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 19/124 (15%)
Query: 77 SLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTC 135
S+C + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 310 SMCPYSSSQKTHLT--RHMRT---------HSGEKPFKCEQCSYV-ASNQHEVTRHAR-- 355
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ P C CDY + + + H+ H + + C C + ++ L YH+
Sbjct: 356 --QVHDGP--KPLACPHCDYKTADRSNFKKHVELHVSPRQFLCPVCEYAASKKCNLQYHI 411
Query: 196 KKTY 199
K +
Sbjct: 412 KSRH 415
>gi|380019440|ref|XP_003693613.1| PREDICTED: transcriptional repressor CTCFL-like [Apis florea]
Length = 718
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 15/87 (17%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRT 169
C +C + +T+ EL+ H R +RH C+ CDY S + ++ HIR
Sbjct: 285 CKFCDSAFTTS-GELVRHVR----------YRHTHEKPHKCHECDYASVELSKLKRHIRC 333
Query: 170 HTGEKPYACGQCAFRSASVAGLHYHLK 196
HTGE+PY C C + S L HL+
Sbjct: 334 HTGERPYQCPHCTYASPDTFKLKRHLR 360
>gi|260823040|ref|XP_002603991.1| hypothetical protein BRAFLDRAFT_71721 [Branchiostoma floridae]
gi|229289316|gb|EEN60002.1| hypothetical protein BRAFLDRAFT_71721 [Branchiostoma floridae]
Length = 364
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + HIR HTGEKPY CG+C FR+A + L H++
Sbjct: 188 MRTHTGEKPYKCDHCDYSAADKSTLVKHIRKHTGEKPYMCGECGFRTADRSTLSRHMR 245
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F+C CDY + + H+ THTGEKPY CG+C R+A + L H++
Sbjct: 300 MRTHSGGKPFMCDRCDYSAAQKCTLDRHLMTHTGEKPYMCGECGHRTAEKSDLARHMR 357
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT ++ C CDY + + H+ THTGEKP+ CG+C R+A + L+ H++
Sbjct: 244 MRTHTGERRYKCDQCDYSAARKYDLDKHLATHTGEKPFMCGECGHRTARKSTLYKHMR 301
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H+RTHTGEKPY C QC + +A + L+ HL K
Sbjct: 113 YMCEVCGFRTAYRSELSRHMRTHTGEKPYKCDQCDYSAAGKSALNQHLAK 162
Score = 42.7 bits (99), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C C + +A + L H++K
Sbjct: 169 YLCEECGYSATRNSYLSQHMRTHTGEKPYKCDHCDYSAADKSTLVKHIRK 218
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C+Y + N + H++ HTGEKP+ C QC + ++ + L H+
Sbjct: 56 YICGECEYKTTNKSHLSRHMKIHTGEKPHKCDQCDYSASHKSNLDRHI 103
Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 162 CMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
C R H HTGEKPY CG+C +++ + + L H+K
Sbjct: 42 CSRRHTTKHTGEKPYICGECEYKTTNKSHLSRHMK 76
Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY C +C + + + L H++
Sbjct: 132 MRTHTGEKPYKCDQCDYSAAGKSALNQHLAKHTGEKPYLCEECGYSATRNSYLSQHMR 189
Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 11/82 (13%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C Y A ST L++H IR ++C C + + + + H+RTHTGE
Sbjct: 202 CDYSAADKST----LVKH-------IRKHTGEKPYMCGECGFRTADRSTLSRHMRTHTGE 250
Query: 174 KPYACGQCAFRSASVAGLHYHL 195
+ Y C QC + +A L HL
Sbjct: 251 RRYKCDQCDYSAARKYDLDKHL 272
>gi|354498864|ref|XP_003511532.1| PREDICTED: RE1-silencing transcription factor-like [Cricetulus
griseus]
Length = 1068
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C + +R
Sbjct: 216 CDRCGY-----NTNRYDHYTAHLKHHTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 270
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 271 RKVYTCSKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 322
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEH 131
KH H++ + + C C+Y R + N F C S N ++H
Sbjct: 234 KH-HTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFPRKVYTCSKCNYFSDRKNNYVQH 292
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 293 -------VRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 345
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 346 TRHARQVHN 354
Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 306 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR--- 350
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 351 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 407
Query: 197 KTY 199
+
Sbjct: 408 SKH 410
>gi|260787841|ref|XP_002588960.1| hypothetical protein BRAFLDRAFT_89151 [Branchiostoma floridae]
gi|229274132|gb|EEN44971.1| hypothetical protein BRAFLDRAFT_89151 [Branchiostoma floridae]
Length = 748
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 111 SPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
SP ++C +++ N L+ ++ TD HK C CDY + + SH+ H
Sbjct: 440 SPTGVFCDQPITSETN-LVSQPKS-----NTDENPHK--CDQCDYSAAQKSNLDSHLAKH 491
Query: 171 TGEKPYACGQCAFRSASVAGLHYHLK 196
TG+KP+ CG+C +R+A + L H++
Sbjct: 492 TGDKPFMCGECGYRTAKKSHLSIHMR 517
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 38/123 (30%), Positives = 55/123 (44%), Gaps = 25/123 (20%)
Query: 79 CKHCH---SQLSHLD--LLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCR 133
C HC +Q SHLD L +H YM C Y A+ S + +H R
Sbjct: 583 CDHCDYSAAQKSHLDSHLANHTGDKPYMCGE---------CGYRTAIKSY----ISQHMR 629
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T P++ C CDY + + H+ HTG+KPY CG+C +R+A + L
Sbjct: 630 THTG---EKPYK----CDQCDYSAARKDSLDQHLAKHTGDKPYMCGECGYRTALKSDLSR 682
Query: 194 HLK 196
H++
Sbjct: 683 HIR 685
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + G + H+ HTG+KPY CG+C +R+ + L H++
Sbjct: 516 MRTHSGEKPYKCEQCDYSAARKGSLDQHLAKHTGDKPYMCGECEYRTVLKSDLSRHMR 573
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 132 CRTC--KSMIRTDPFRH--------KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
C C ++++++D RH + C CDY + + SH+ HTG+KPY CG+C
Sbjct: 555 CGECEYRTVLKSDLSRHMRTHTGDKPYKCDHCDYSAAQKSHLDSHLANHTGDKPYMCGEC 614
Query: 182 AFRSASVAGLHYHLK 196
+R+A + + H++
Sbjct: 615 GYRTAIKSYISQHMR 629
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A L HL K
Sbjct: 609 YMCGECGYRTAIKSYISQHMRTHTGEKPYKCDQCDYSAARKDSLDQHLAK 658
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C+Y + + H+RTHTG+KPY C C + +A + L HL
Sbjct: 553 YMCGECEYRTVLKSDLSRHMRTHTGDKPYKCDHCDYSAAQKSHLDSHL 600
>gi|118344090|ref|NP_001071870.1| zinc finger protein isoform 1 [Ciona intestinalis]
gi|70571662|dbj|BAE06797.1| zinc finger protein [Ciona intestinalis]
Length = 634
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 10/71 (14%)
Query: 127 ELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
EL H R + PFR C CDY S I +R H R+HTGE+PY+C +C A
Sbjct: 393 ELTRHTRYIHT--HEKPFR----CTLCDYASVEISKLRRHFRSHTGERPYSCEECGKAFA 446
Query: 187 SVAGLHYHLKK 197
+HLK+
Sbjct: 447 D----SFHLKR 453
>gi|260823114|ref|XP_002604028.1| hypothetical protein BRAFLDRAFT_71682 [Branchiostoma floridae]
gi|229289353|gb|EEN60039.1| hypothetical protein BRAFLDRAFT_71682 [Branchiostoma floridae]
Length = 927
Score = 53.5 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + HIR HTGEKPY CG+C FR+A L H++
Sbjct: 244 YKCDQCDYSATEKSSLVKHIRKHTGEKPYMCGECGFRTAMKCNLSVHIR 292
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + HIR HT EKPY CG+C +R+A + L H++
Sbjct: 718 MRTHTGERPYKCDQCDYCAADKSTLVRHIRKHTDEKPYMCGECGYRAAQKSHLSAHMR 775
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y S + H+RTHTGEKPY C QC + +A + L H++K
Sbjct: 104 YMCGECGYRSVQKSDLSRHMRTHTGEKPYKCDQCDYSAAQKSTLDQHVRK 153
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+R H+GE PY CG+C +R+ + L H++
Sbjct: 123 MRTHTGEKPYKCDQCDYSAAQKSTLDQHVRKHSGENPYMCGECGYRAGKKSHLFRHMR 180
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 32/67 (47%)
Query: 131 HCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAG 190
H T I + F+C C Y + + H+RTHTGEKPY C QC + +A
Sbjct: 311 HKSTLDQHIEKHTGQKPFMCGECGYRAAQWQHLYRHMRTHTGEKPYKCEQCDYSAAQKGH 370
Query: 191 LHYHLKK 197
L HL K
Sbjct: 371 LDRHLMK 377
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IR+ + C C+Y + + + HI HTG+KP+ CG+C +R+A L+ H++
Sbjct: 291 IRSHTGEKPYKCDQCEYSAAHKSTLDQHIEKHTGQKPFMCGECGYRAAQWQHLYRHMR 348
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + +H+RTHTGEKPY C QC + +A + L+ HL K
Sbjct: 643 YMCEECGFRTSRKFNLSAHMRTHTGEKPYKCDQCDYSAAQKSDLNKHLAK 692
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 17/100 (17%)
Query: 114 CIYCKAVLSTNLNELIEH-------CRTC----------KSMIRTDPFRHKFVCYACDYF 156
C YC A ST + + +H C C + +R + C CDY
Sbjct: 732 CDYCAADKSTLVRHIRKHTDEKPYMCGECGYRAAQKSHLSAHMRIHTGEKPYKCDQCDYS 791
Query: 157 SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ + H+ HTG+KPY CG+C +R+A + L H++
Sbjct: 792 AGQKSDLDRHLTIHTGDKPYMCGECGYRAARKSHLSQHMR 831
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + G + H+ HTGEKP+ C +C +R+A + L H++
Sbjct: 347 MRTHTGEKPYKCEQCDYSAAQKGHLDRHLMKHTGEKPFMCDECGYRTARKSTLIRHMR 404
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + HI H+GEKPY CG+C +R+ + L H++
Sbjct: 179 MRTHTGEKPYKCDQCDYSAAQKCDLDKHIAKHSGEKPYMCGECGYRTVERSTLSRHMR 236
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 32/64 (50%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T +R + ++C C Y + + H+RTHTGEKPY C QC + +A L
Sbjct: 146 TLDQHVRKHSGENPYMCGECGYRAGKKSHLFRHMRTHTGEKPYKCDQCDYSAAQKCDLDK 205
Query: 194 HLKK 197
H+ K
Sbjct: 206 HIAK 209
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + I + H+ H+ +KPY CG C +R+A + L H++
Sbjct: 830 MRTHTAEKPYKCDQCDYSAAQISHLVRHLSNHSNDKPYMCGVCGYRAAQKSHLSAHMR 887
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHT EKPY C QC + +A ++ L HL
Sbjct: 811 YMCGECGYRAARKSHLSQHMRTHTAEKPYKCDQCDYSAAQISHLVRHL 858
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HT EKPY CG+C R+A + L H++
Sbjct: 662 MRTHTGEKPYKCDQCDYSAAQKSDLNKHLAKHTSEKPYICGECGHRTARKSYLSQHMR 719
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + +H+RTHTGEKPY C QC + +A L H+
Sbjct: 867 YMCGVCGYRAAQKSHLSAHMRTHTGEKPYKCDQCDYSAAQKGTLDDHV 914
Score = 45.8 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 122 STNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
+T + L++H IR ++C C + + + HIR+HTGEKPY C QC
Sbjct: 253 ATEKSSLVKH-------IRKHTGEKPYMCGECGFRTAMKCNLSVHIRSHTGEKPYKCDQC 305
Query: 182 AFRSASVAGLHYHLKK 197
+ +A + L H++K
Sbjct: 306 EYSAAHKSTLDQHIEK 321
Score = 45.8 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HTGEKPY C QC + + + L H++K
Sbjct: 216 YMCGECGYRTVERSTLSRHMRIHTGEKPYKCDQCDYSATEKSSLVKHIRK 265
Score = 45.1 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H+RTHTGE+PY C QC + +A + L H++K
Sbjct: 699 YICGECGHRTARKSYLSQHMRTHTGERPYKCDQCDYCAADKSTLVRHIRK 748
Score = 40.4 bits (93), Expect = 0.36, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G M H+ +TGEKPY CG+C +RS + L H++
Sbjct: 89 GKMGRHVVENTGEKPYMCGECGYRSVQKSDLSRHMR 124
Score = 40.4 bits (93), Expect = 0.38, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
F+C C Y + + H+R+H+GEKP+ C QC F +A
Sbjct: 384 FMCDECGYRTARKSTLIRHMRSHSGEKPHKCYQCDFSAA 422
Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G M H+ HTG+KPY C +C FR++ L H++
Sbjct: 628 GDMGRHVVKHTGQKPYMCEECGFRTSRKFNLSAHMR 663
Score = 35.8 bits (81), Expect = 9.1, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ 180
+RT + C CDY + G + H+ HTGEKPY Q
Sbjct: 886 MRTHTGEKPYKCDQCDYSAAQKGTLDDHVANHTGEKPYKYDQ 927
>gi|260832564|ref|XP_002611227.1| hypothetical protein BRAFLDRAFT_71188 [Branchiostoma floridae]
gi|229296598|gb|EEN67237.1| hypothetical protein BRAFLDRAFT_71188 [Branchiostoma floridae]
Length = 288
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKPY CGQC +R+A + L+YH++
Sbjct: 94 YKCDQCDYSAARKESLEQHMIKHTGEKPYMCGQCGYRTADRSNLYYHMR 142
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + C CDY + + H+ THTGEKP CG+C +R+A + L H+
Sbjct: 141 MRTHTGEKPYKCDHCDYSAIRKTYLDQHMATHTGEKPLVCGECGYRTADRSALTRHM 197
Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CD+ + + HI HTGEKPY CG+C +R+A L+ H++
Sbjct: 38 YKCEQCDFSTRFKVNLDRHIAKHTGEKPYMCGECGYRTADRFTLNRHMR 86
Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C Y + + H++THTGEKP+ C QC F + L H+ K
Sbjct: 234 YTCEECGYRTAYRSALTRHMKTHTGEKPHKCDQCDFSAIQKVSLDKHMAK 283
Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + + H+R+HTG KPY C QC + +A L H+
Sbjct: 66 YMCGECGYRTADRFTLNRHMRSHTGVKPYKCDQCDYSAARKESLEQHM 113
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+R HTGEKPY C QC F + L H+ K
Sbjct: 10 YMCGECGYRTADRSNLTVHMRKHTGEKPYKCEQCDFSTRFKVNLDRHIAK 59
Score = 39.3 bits (90), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEK Y C +C +R+A + L H+K
Sbjct: 206 YKCDLCDYSAATKTNLDRHMTKHTGEKSYTCEECGYRTAYRSALTRHMK 254
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
VC C Y + + + H+ HTGEKPY C C + +A+ L H+ K
Sbjct: 178 LVCGECGYRTADRSALTRHMTRHTGEKPYKCDLCDYSAATKTNLDRHMTK 227
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 170 HTGEKPYACGQCAFRSASVAGLHYHLKK 197
H GEKPY CG+C +R+A + L H++K
Sbjct: 4 HNGEKPYMCGECGYRTADRSNLTVHMRK 31
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + + H+RTHTGEKPY C C + + L H+
Sbjct: 122 YMCGQCGYRTADRSNLYYHMRTHTGEKPYKCDHCDYSAIRKTYLDQHM 169
>gi|260795677|ref|XP_002592831.1| hypothetical protein BRAFLDRAFT_65416 [Branchiostoma floridae]
gi|229278055|gb|EEN48842.1| hypothetical protein BRAFLDRAFT_65416 [Branchiostoma floridae]
Length = 483
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 113 FCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTG 172
+C C S L+ L H RT R PF+ C C + +G ++SH+RTHTG
Sbjct: 163 WCEECSKQFS-QLSNLKAHMRT---HTREKPFK----CEDCSWQFSQLGALKSHMRTHTG 214
Query: 173 EKPYACGQCAFRSASVAGLHYHLK 196
EKPY C +C+ + + + L H++
Sbjct: 215 EKPYRCEECSRQCSKLGDLKKHMR 238
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 19/121 (15%)
Query: 78 LCKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTC 135
+C+ C + S L DL H +T + P+ C C S L L H RT
Sbjct: 303 MCEECGKEFSQLSDLKTHMRT---------HTGEKPYMCEECSRQFS-KLGNLNAHMRT- 351
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
P+R C C +G +++H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 352 --HTGEKPYR----CEECSKQFSRLGHLKTHMRTHTGEKPYKCEECSRQFSQLGNLDSHM 405
Query: 196 K 196
+
Sbjct: 406 R 406
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C Q S LD H KT +M + C C+ S L L H
Sbjct: 248 CEECGRQFSRLD---HIKT--HMRTHTGEKPYK--CEECRRQFS-ELGNLKTH------- 292
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT ++C C + +++H+RTHTGEKPY C +C+ + + + L+ H++
Sbjct: 293 MRTHTGEKPYMCEECGKEFSQLSDLKTHMRTHTGEKPYMCEECSRQFSKLGNLNAHMR 350
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 56/131 (42%), Gaps = 19/131 (14%)
Query: 68 VTTIPTQNHSLCKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNL 125
V ++ + C+ C Q S L +L H +T + PF C C S L
Sbjct: 153 VRSVREEKRYWCEECSKQFSQLSNLKAHMRT---------HTREKPFKCEDCSWQFS-QL 202
Query: 126 NELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
L H RT P+R C C +G ++ H+RTHTGEKPY C +C +
Sbjct: 203 GALKSHMRT---HTGEKPYR----CEECSRQCSKLGDLKKHMRTHTGEKPYRCEECGRQF 255
Query: 186 ASVAGLHYHLK 196
+ + + H++
Sbjct: 256 SRLDHIKTHMR 266
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 49/118 (41%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C Q S L L ++M + C C S L L H RT
Sbjct: 360 CEECSKQFSRLGHLK-----THMRTHTGEKPYK--CEECSRQFS-QLGNLDSHMRT---H 408
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P R C C +G ++ H+RTHTGEKPY C +C+ + + + L H++
Sbjct: 409 TGEKPCR----CEECGGQFSELGALKKHMRTHTGEKPYRCEECSRQFSDLGNLKKHMR 462
Score = 39.7 bits (91), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 33/60 (55%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
S +R+ ++ C C + +++H+RTHT EKP+ C C+++ + + L H++
Sbjct: 151 SSVRSVREEKRYWCEECSKQFSQLSNLKAHMRTHTREKPFKCEDCSWQFSQLGALKSHMR 210
>gi|260795190|ref|XP_002592589.1| hypothetical protein BRAFLDRAFT_118912 [Branchiostoma floridae]
gi|229277810|gb|EEN48600.1| hypothetical protein BRAFLDRAFT_118912 [Branchiostoma floridae]
Length = 1354
Score = 53.5 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 36/66 (54%)
Query: 131 HCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAG 190
H ++RT + + C C+Y + + H+R HTGEKPY CG+C FR+A +
Sbjct: 730 HKSKLSQLMRTHTEQKPYKCDQCNYSTDREFHLVQHLRRHTGEKPYMCGECGFRTAYKSS 789
Query: 191 LHYHLK 196
L H++
Sbjct: 790 LSVHMR 795
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 131 HCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAG 190
H +T +P ++C C Y + + H+R+HTGEKPY CGQC + +A +
Sbjct: 1236 HMKTHTGEKHYNPDEKPYMCGECGYRAGYRPILSRHMRSHTGEKPYKCGQCDYSAAQKST 1295
Query: 191 LHYHLKK 197
L HL K
Sbjct: 1296 LDQHLGK 1302
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RT + C CDY + + + H+R HTG+K Y CG+C +R+A L +H+K
Sbjct: 1182 RTHTGDRPYQCGQCDYSAAHKSHLDRHLRKHTGKKAYMCGECGYRAAHRCALSFHMK 1238
Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C+Y + + H+ HTGEKPY CG+C +R+ + L H++
Sbjct: 803 YKCDQCNYSATQESHLDKHLMIHTGEKPYMCGECGYRTTQKSALSKHMR 851
Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H RTHTG++PY CGQC + +A + L HL+K
Sbjct: 1162 YMCGECGFRTAKRSNLSIHKRTHTGDRPYQCGQCDYSAAHKSHLDRHLRK 1211
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHT EK Y C QC F +A + L H++K
Sbjct: 831 YMCGECGYRTTQKSALSKHMRTHTCEKSYKCDQCDFSTAYKSSLDKHMRK 880
Score = 45.8 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+R+ + C CDY + + H+ HTG+KPY C +C +R+A + L H++
Sbjct: 1272 MRSHTGEKPYKCGQCDYSAAQKSTLDQHLGKHTGQKPYMCEECGYRAARKSCLARHMR 1329
Score = 42.7 bits (99), Expect = 0.090, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C + + + H+R HTGEKPY C QC + + + L HL
Sbjct: 775 YMCGECGFRTAYKSSLSVHMRIHTGEKPYKCDQCNYSATQESHLDKHL 822
Score = 41.2 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTG-------EKPYACGQCAFRSASVAGL 191
+R + ++C C Y + + + H++THTG EKPY CG+C +R+ L
Sbjct: 1209 LRKHTGKKAYMCGECGYRAAHRCALSFHMKTHTGEKHYNPDEKPYMCGECGYRAGYRPIL 1268
Query: 192 HYHLK 196
H++
Sbjct: 1269 SRHMR 1273
Score = 39.3 bits (90), Expect = 0.94, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ 180
TC +R P++ C C YF+ + H+ HTGEKPY C +
Sbjct: 681 TCDVNLRDKPYK----CDQCGYFAALESLLVQHLTKHTGEKPYTCAE 723
>gi|260823092|ref|XP_002604017.1| hypothetical protein BRAFLDRAFT_71694 [Branchiostoma floridae]
gi|229289342|gb|EEN60028.1| hypothetical protein BRAFLDRAFT_71694 [Branchiostoma floridae]
Length = 179
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + N + H+R HTGEKPY CG+C +R+A + L H++
Sbjct: 57 MRTHTGEKPYKCDQCDYAAANKFDLDKHVRKHTGEKPYMCGECGYRAAQRSSLSRHMR 114
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + + C CDY N + H+R HTGEKPY CG+C +R+A + L H+K
Sbjct: 113 MRTHTGQKPYKCDQCDYGFANKFDLDKHVRKHTGEKPYMCGECGYRAAQRSTLSRHMK 170
Score = 42.7 bits (99), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTG+KPY C QC + A+ L H++K
Sbjct: 94 YMCGECGYRAAQRSSLSRHMRTHTGQKPYKCDQCDYGFANKFDLDKHVRK 143
Score = 42.7 bits (99), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + H+RTHTGEKPY C QC + +A+ L H++K
Sbjct: 38 YMCEKCGYRVAQKCDLSRHMRTHTGEKPYKCDQCDYAAANKFDLDKHVRK 87
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H THTG++PY C +C +R A L H++
Sbjct: 1 MRTHTGEKPYKCDQCDYSAAVKSHLNQHQVTHTGQQPYMCEKCGYRVAQKCDLSRHMR 58
>gi|260822986|ref|XP_002603964.1| hypothetical protein BRAFLDRAFT_71748 [Branchiostoma floridae]
gi|229289289|gb|EEN59975.1| hypothetical protein BRAFLDRAFT_71748 [Branchiostoma floridae]
Length = 1148
Score = 53.5 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ + C CDY + + H+ HTGEKPY CG+C +RS+ +GL+ H+K+
Sbjct: 176 KKPYKCDQCDYAAAQKCELDQHLPKHTGEKPYMCGECGYRSSFKSGLYRHMKR 228
Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C CDY + + H+RTHTGEKPY C QC + +AS + L HL
Sbjct: 321 YMCEKCDYRTTQKSLLTIHVRTHTGEKPYKCDQCDYFAASNSTLRQHL 368
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C + + N + H+RTHTGEKPY C C + +A +GL+ H
Sbjct: 490 YMCSECGFMTANTSNLAKHMRTHTGEKPYKCDHCDYAAARKSGLNRH 536
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 148 FVCYACDY-FSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
FVC C Y +YN+ R H+RTHTGEKPY C QC + +A L+ H
Sbjct: 434 FVCGECGYRTAYNMTLAR-HMRTHTGEKPYKCDQCDYSAAQKYDLNNH 480
Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 60/146 (41%), Gaps = 30/146 (20%)
Query: 73 TQNHSLCKHCHSQLSHLDLLD------------HCKTCSYMIRPNA---------NNTFS 111
++ H +C+ C + + LL C C Y N+ +
Sbjct: 317 SEKHYMCEKCDYRTTQKSLLTIHVRTHTGEKPYKCDQCDYFAASNSTLRQHLITKHTGEK 376
Query: 112 PF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
P+ C C +T+ ++L H RT P++ C CDY + ++ H H
Sbjct: 377 PYICGEC-GYRTTHKSDLSRHMRT---HTEERPYK----CDQCDYSAAWKTALKQHRAKH 428
Query: 171 TGEKPYACGQCAFRSASVAGLHYHLK 196
TG+KP+ CG+C +R+A L H++
Sbjct: 429 TGDKPFVCGECGYRTAYNMTLARHMR 454
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 32/63 (50%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T +RT + C CDY + + +H HTGEKPY C +C F +A+ + L
Sbjct: 448 TLARHMRTHTGEKPYKCDQCDYSAAQKYDLNNHRANHTGEKPYMCSECGFMTANTSNLAK 507
Query: 194 HLK 196
H++
Sbjct: 508 HMR 510
Score = 45.8 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+FVC C + + + H+ THTG+KPY C QC + +A L HL K
Sbjct: 545 RFVCNECGFRTARRSHLNLHMMTHTGDKPYKCDQCDYSAAQKRHLDQHLTK 595
Score = 45.8 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 17/118 (14%)
Query: 79 CKHC-HSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKS 137
C C +S DL +H R N C C ++ N + L +H RT
Sbjct: 464 CDQCDYSAAQKYDLNNH--------RANHTGEKPYMCSEC-GFMTANTSNLAKHMRTHTG 514
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
P++ C CDY + + H HTGEK + C +C FR+A + L+ H+
Sbjct: 515 ---EKPYK----CDHCDYAAARKSGLNRHQAIHTGEKRFVCNECGFRTARRSHLNLHM 565
Score = 41.6 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 150 CYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYH 194
C CDY + + + +H+ HT +KPY CG+C +R+A GL H
Sbjct: 237 CEHCDYSTADKCSLDTHLLVKHTADKPYMCGECGYRTAWKYGLTQH 282
Score = 40.4 bits (93), Expect = 0.42, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 143 PFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK-PYACGQCAFRSASVAGLHYHLKK 197
P+R C C Y + + + H++ H+GEK PY C QC + +A L HL K
Sbjct: 149 PYR----CEKCGYRTADESTLSQHMKVHSGEKKPYKCDQCDYAAAQKCELDQHLPK 200
Score = 37.4 bits (85), Expect = 3.1, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Query: 128 LIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSAS 187
L +H RT + RT + C CD N + H + H+ EK Y C +C +R+
Sbjct: 279 LTQHERTHTATERT------YKCDQCDKAYTNKSALNQHYKKHSSEKHYMCEKCDYRTTQ 332
Query: 188 VAGLHYHLK 196
+ L H++
Sbjct: 333 KSLLTIHVR 341
Score = 37.0 bits (84), Expect = 4.5, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y S + H++ HTG KP+ C C + +A L HL
Sbjct: 207 YMCGECGYRSSFKSGLYRHMKRHTGVKPHKCEHCDYSTADKCSLDTHL 254
>gi|124487069|ref|NP_001074856.1| transcriptional repressor CTCFL [Mus musculus]
gi|229553919|sp|A2APF3.1|CTCFL_MOUSE RecName: Full=Transcriptional repressor CTCFL; AltName:
Full=Brother of the regulator of imprinted sites;
AltName: Full=CCCTC-binding factor; AltName: Full=CTCF
paralog; AltName: Full=CTCF-like protein
gi|157170432|gb|AAI52846.1| CCCTC-binding factor (zinc finger protein)-like [synthetic
construct]
Length = 636
Score = 53.5 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 45/89 (50%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC A LI+H RT K+ KF C CDY C+++H+R HTGE
Sbjct: 460 CRYCPAGFHERY-ALIQHQRTHKN-------EKKFKCKQCDYACKQERCLKAHMRMHTGE 511
Query: 174 KPYACGQCA--FRSASVAGLHYHLKKTYH 200
KP++C C FR + L HL+K YH
Sbjct: 512 KPFSCLACNKHFRQKQL--LTVHLRK-YH 537
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 11/76 (14%)
Query: 132 CRTCK-------SMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ 180
CR C ++R ++H F C C Y S M+ HIR+HTGE+P+ C Q
Sbjct: 315 CRDCDMAFVTSGELVRHRRYKHTYEKPFKCSLCKYASVEASKMKRHIRSHTGERPFQCCQ 374
Query: 181 CAFRSASVAGLHYHLK 196
CA+ S L H++
Sbjct: 375 CAYASRDSYKLKRHMR 390
Score = 45.8 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 358 KRHIRSHTGERPFQCCQCAYASRDSYKLKRHMRTHSGEKPYECPTCHVRFTQSGTMKIHI 417
Query: 196 KKTY 199
+ +
Sbjct: 418 AQKH 421
>gi|73624754|gb|AAZ79234.1| BORIS [Mus musculus]
Length = 636
Score = 53.5 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 45/89 (50%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC A LI+H RT K+ KF C CDY C+++H+R HTGE
Sbjct: 460 CRYCPAGFHERY-ALIQHQRTHKN-------EKKFKCKQCDYACKQERCLKAHMRMHTGE 511
Query: 174 KPYACGQCA--FRSASVAGLHYHLKKTYH 200
KP++C C FR + L HL+K YH
Sbjct: 512 KPFSCLACNKHFRQKQL--LTVHLRK-YH 537
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 11/76 (14%)
Query: 132 CRTCK-------SMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ 180
CR C ++R ++H F C C Y S M+ HIR+HTGE+P+ C Q
Sbjct: 315 CRDCDMAFVTSGELVRHRRYKHTYEKPFKCSLCKYASVEASKMKRHIRSHTGERPFQCCQ 374
Query: 181 CAFRSASVAGLHYHLK 196
CA+ S L H++
Sbjct: 375 CAYASRDSYKLKRHMR 390
Score = 45.8 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 358 KRHIRSHTGERPFQCCQCAYASRDSYKLKRHMRTHSGEKPYECPTCHVRFTQSGTMKIHI 417
Query: 196 KKTY 199
+ +
Sbjct: 418 AQKH 421
>gi|293346527|ref|XP_002726349.1| PREDICTED: transcriptional repressor CTCFL-like isoform 2 [Rattus
norvegicus]
gi|293358287|ref|XP_002729302.1| PREDICTED: transcriptional repressor CTCFL-like isoform 2 [Rattus
norvegicus]
Length = 640
Score = 53.5 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 45/89 (50%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC A L++H RT K+ KF C CDY C+ +H+RTHTGE
Sbjct: 458 CRYCPAAFHERY-ALLQHQRTHKN-------EKKFKCKQCDYACKQERCLTAHMRTHTGE 509
Query: 174 KPYACGQCA--FRSASVAGLHYHLKKTYH 200
+P++C C FR + L HL+K YH
Sbjct: 510 RPFSCLTCNKHFRQKQL--LTVHLRK-YH 535
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ HIR+HTGE+P+ C QCA+ S
Sbjct: 322 TSGELVRHRRYKHTHEKPFKCSLCKYASVEASKLKRHIRSHTGERPFQCSQCAYASKDTY 381
Query: 190 GLHYHLK 196
L H++
Sbjct: 382 KLKRHMR 388
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 356 KRHIRSHTGERPFQCSQCAYASKDTYKLKRHMRTHSGEKPYECPTCHARFTQSGTMKIHI 415
Query: 196 KKTY 199
+ +
Sbjct: 416 AQKH 419
Score = 38.5 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKTY 199
+C+ C + +R+H+ THTG +PY CG C AF ++ H K T+
Sbjct: 284 LCHLCLKSFRTVTLLRNHVNTHTGTRPYKCGDCDMAFVTSGELVRHRRYKHTH 336
>gi|293346525|ref|XP_002726348.1| PREDICTED: transcriptional repressor CTCFL-like isoform 1 [Rattus
norvegicus]
gi|293358285|ref|XP_002729301.1| PREDICTED: transcriptional repressor CTCFL-like isoform 1 [Rattus
norvegicus]
Length = 645
Score = 53.5 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 45/89 (50%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC A L++H RT K+ KF C CDY C+ +H+RTHTGE
Sbjct: 458 CRYCPAAFHERY-ALLQHQRTHKN-------EKKFKCKQCDYACKQERCLTAHMRTHTGE 509
Query: 174 KPYACGQCA--FRSASVAGLHYHLKKTYH 200
+P++C C FR + L HL+K YH
Sbjct: 510 RPFSCLTCNKHFRQKQL--LTVHLRK-YH 535
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ HIR+HTGE+P+ C QCA+ S
Sbjct: 322 TSGELVRHRRYKHTHEKPFKCSLCKYASVEASKLKRHIRSHTGERPFQCSQCAYASKDTY 381
Query: 190 GLHYHLK 196
L H++
Sbjct: 382 KLKRHMR 388
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 356 KRHIRSHTGERPFQCSQCAYASKDTYKLKRHMRTHSGEKPYECPTCHARFTQSGTMKIHI 415
Query: 196 KKTY 199
+ +
Sbjct: 416 AQKH 419
Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKTY 199
+C+ C + +R+H+ THTG +PY CG C AF ++ H K T+
Sbjct: 284 LCHLCLKSFRTVTLLRNHVNTHTGTRPYKCGDCDMAFVTSGELVRHRRYKHTH 336
>gi|223462331|gb|AAI51027.1| Ctcfl protein [Mus musculus]
Length = 646
Score = 53.5 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 45/89 (50%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC A LI+H RT K+ KF C CDY C+++H+R HTGE
Sbjct: 460 CRYCPAGFHERY-ALIQHQRTHKN-------EKKFKCKQCDYACKQERCLKAHMRMHTGE 511
Query: 174 KPYACGQCA--FRSASVAGLHYHLKKTYH 200
KP++C C FR + L HL+K YH
Sbjct: 512 KPFSCLACNKHFRQKQL--LTVHLRK-YH 537
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 11/76 (14%)
Query: 132 CRTCK-------SMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ 180
CR C ++R ++H F C C Y S M+ HIR+HTGE+P+ C Q
Sbjct: 315 CRDCDMAFVTSGELVRHRRYKHTYEKPFKCSLCKYASVEASKMKRHIRSHTGERPFQCCQ 374
Query: 181 CAFRSASVAGLHYHLK 196
CA+ S L H++
Sbjct: 375 CAYASRDSYKLKRHMR 390
Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 358 KRHIRSHTGERPFQCCQCAYASRDSYKLKRHMRTHSGEKPYECPTCHVRFTQSGTMKIHI 417
Query: 196 KKTY 199
+ +
Sbjct: 418 AQKH 421
>gi|260823096|ref|XP_002604019.1| hypothetical protein BRAFLDRAFT_57766 [Branchiostoma floridae]
gi|229289344|gb|EEN60030.1| hypothetical protein BRAFLDRAFT_57766 [Branchiostoma floridae]
Length = 705
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + H+R HTGEKPY CG+C FR+A L H+K
Sbjct: 1 MRTHTGEKPYKCDQCDYSAAHKSHLNRHLRKHTGEKPYMCGECGFRTAQRCTLSLHMK 58
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T +R + C C Y S + H+RTHTGEKPY CG+C +R+A + L
Sbjct: 103 TLDQHLRKHTGEKPYTCGECGYRSVQKSDLSKHMRTHTGEKPYKCGECGYRTAYKSDLSR 162
Query: 194 HLK 196
H++
Sbjct: 163 HMR 165
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + HIR HTGEKPY CG+C +R+A + L H++
Sbjct: 201 YKCDQCDYSATQKSKLVRHIRKHTGEKPYMCGECGYRAARKSHLSRHMR 249
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + +H + HTGEKPY CG+C FR+ + L H++
Sbjct: 327 MRTHTGEKPYKCDQCDYSAADYTTLNNHQKKHTGEKPYMCGECGFRTTRKSILSAHVR 384
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A LH HL K
Sbjct: 588 YMCEECGYRTARNFDLSKHMRTHTGEKPYKCDQCDYSAAQKQHLHSHLAK 637
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + SH+ HTGEKPY CG+C R+A + L H++
Sbjct: 607 MRTHTGEKPYKCDQCDYSAAQKQHLHSHLAKHTGEKPYMCGECGHRAARKSHLMVHMR 664
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY CG+C +R+A + L H++
Sbjct: 383 VRTHTGERPYKCDQCDYSAGQKRDLDKHVVKHTGEKPYMCGECGYRTARKSDLSKHMR 440
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT ++C CDY + + H+R HTGEKPY C QC + + + L H++K
Sbjct: 164 MRTHSGEKPYMCDQCDYSATEKSHLDRHLRKHTGEKPYKCDQCDYSATQKSKLVRHIRK 222
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 30/59 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
IR ++C C Y + + H+RTHTGEKPY C QC + +A + L H K
Sbjct: 220 IRKHTGEKPYMCGECGYRAARKSHLSRHMRTHTGEKPYKCDQCDYSAADKSSLDQHFAK 278
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 51/122 (41%), Gaps = 26/122 (21%)
Query: 79 CKHCHSQLSHLDL--LDHCKTCSYMIRPNANNTFSPFCIYC--KAVLSTNLNELIEHCRT 134
C + Q +HLDL L H YM C C + L TNL+
Sbjct: 453 CDYSAPQKNHLDLHLLKHTGEKPYM------------CGECGYRTALKTNLSR------- 493
Query: 135 CKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+RT + C CDY + + +H+ THTGEKPY C +C + + + L H
Sbjct: 494 ---HMRTHTGEKPYKCDQCDYSAAQKDTLDAHVATHTGEKPYTCEECGHSTTTKSHLSRH 550
Query: 195 LK 196
++
Sbjct: 551 MR 552
Score = 45.1 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+R+ + C CDY + + H+ HTGEKPY CG+C +R+A L H++
Sbjct: 439 MRSHTGEKPYKCDQCDYSAPQKNHLDLHLLKHTGEKPYMCGECGYRTALKTNLSRHMR 496
Score = 44.7 bits (104), Expect = 0.021, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H++THTGEKPY C QC + +A + L HL+K
Sbjct: 38 YMCGECGFRTAQRCTLSLHMKTHTGEKPYKCDQCEYAAAHKSNLDKHLRK 87
Score = 44.3 bits (103), Expect = 0.026, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C C Y + + H+RTH+GEKPY C QC + + + L HL+K
Sbjct: 136 MRTHTGEKPYKCGECGYRTAYKSDLSRHMRTHSGEKPYMCDQCDYSATEKSHLDRHLRK 194
Score = 43.5 bits (101), Expect = 0.045, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + H HTG+KPY C +C +R+A L H++
Sbjct: 248 MRTHTGEKPYKCDQCDYSAADKSSLDQHFAKHTGDKPYMCEECGYRTAKKFELSKHMR 305
Score = 42.7 bits (99), Expect = 0.087, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 131 HCRTCKSMI----RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
H T KS + RT + C CDY + + H+ HTG+KPY C +C +R+A
Sbjct: 539 HSTTTKSHLSRHMRTHTGEKPYKCDHCDYSAAVKSSLDQHLAKHTGDKPYMCEECGYRTA 598
Query: 187 SVAGLHYHLK 196
L H++
Sbjct: 599 RNFDLSKHMR 608
Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + +H+RTHTGE+PY C QC + + L H+ K
Sbjct: 364 YMCGECGFRTTRKSILSAHVRTHTGERPYKCDQCDYSAGQKRDLDKHVVK 413
Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ H+RTHTGEKPY C QC + +A L+ H KK
Sbjct: 323 LSKHMRTHTGEKPYKCDQCDYSAADYTTLNNHQKK 357
Score = 42.4 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R+HTGEKPY C QC + + L HL K
Sbjct: 420 YMCGECGYRTARKSDLSKHMRSHTGEKPYKCDQCDYSAPQKNHLDLHLLK 469
Score = 40.0 bits (92), Expect = 0.48, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 167 IRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RTHTGEKPY C QC + +A + L+ HL+K
Sbjct: 1 MRTHTGEKPYKCDQCDYSAAHKSHLNRHLRK 31
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C + + + H+RTHTGEK Y C QC + +A L HL
Sbjct: 644 YMCGECGHRAARKSHLMVHMRTHTGEKTYKCDQCDYSTAQKGMLDQHL 691
Score = 37.0 bits (84), Expect = 4.3, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ 180
++C C Y + + H+RTHTGEKPY CG+
Sbjct: 285 YMCEECGYRTAKKFELSKHMRTHTGEKPYMCGE 317
Score = 37.0 bits (84), Expect = 4.4, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++T + C C+Y + + + H+R HTGEKPY CG+ + + L HL+K
Sbjct: 57 MKTHTGEKPYKCDQCEYAAAHKSNLDKHLRKHTGEKPYMCGE-----SQKSTLDQHLRK 110
>gi|260811047|ref|XP_002600234.1| hypothetical protein BRAFLDRAFT_66738 [Branchiostoma floridae]
gi|229285520|gb|EEN56246.1| hypothetical protein BRAFLDRAFT_66738 [Branchiostoma floridae]
Length = 216
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 29/139 (20%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLS----------TNLNE 127
C+ C+ Q S LD L I + P+ C +C S T+ E
Sbjct: 82 CEECNQQFSRLDDL--------RIHMRTHTGEKPYKCKHCNKGFSRSGHLNIHMRTHTGE 133
Query: 128 LIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA 177
+ C C KS IRT ++C C+ + N G +++H+RTHTGEKPY
Sbjct: 134 NLYRCEECSKQFTNLSNLKSHIRTHTGEKPYMCEECNKYFSNSGDLKTHMRTHTGEKPYR 193
Query: 178 CGQCAFRSASVAGLHYHLK 196
C +C + +++ L H++
Sbjct: 194 CEECCKQFTTLSNLKRHMR 212
Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C +G ++ HIRTHTGE+PY+C +C + + + L H++
Sbjct: 43 LRTHTGERPYQCGECGRRFSQLGTLKKHIRTHTGERPYSCEECNQQFSRLDDLRIHMR 100
Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 31/63 (49%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T K IRT + C C+ + +R H+RTHTGEKPY C C + L+
Sbjct: 66 TLKKHIRTHTGERPYSCEECNQQFSRLDDLRIHMRTHTGEKPYKCKHCNKGFSRSGHLNI 125
Query: 194 HLK 196
H++
Sbjct: 126 HMR 128
>gi|260823058|ref|XP_002604000.1| hypothetical protein BRAFLDRAFT_71711 [Branchiostoma floridae]
gi|229289325|gb|EEN60011.1| hypothetical protein BRAFLDRAFT_71711 [Branchiostoma floridae]
Length = 1216
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T +RT + C CDY + + + HIR HTGEKPY CG+C R+A + L
Sbjct: 288 TLSRHMRTHTGEKPYKCDHCDYSAADKSTLVKHIRKHTGEKPYMCGECGHRTAEKSDLAR 347
Query: 194 HLK 196
H++
Sbjct: 348 HMR 350
Score = 52.8 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+RTHTGEKPY CG+C +R+A + L H++
Sbjct: 246 YLCEECGYSATRNSYLSQHMRTHTGEKPYKCGECGYRTADRSTLSRHMR 294
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKS----MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
TC+S +RT + C CDY + + H+ HTGEKPY CG+C +R+A
Sbjct: 607 TCRSHLFRYMRTHTGEKPYKCDQCDYSAVQKSDLDKHLAIHTGEKPYMCGECGYRAARKF 666
Query: 190 GLHYHLK 196
L H+K
Sbjct: 667 NLSQHMK 673
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H RTHTGEKPY C QC F +A + L+ HL K
Sbjct: 967 YMCGDCGYRTAKKSHLSQHTRTHTGEKPYKCDQCVFSAAGKSALNQHLAK 1016
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IRT + C CDY + + + +H R HTGEKPY CG+C FR+ L H++
Sbjct: 1098 IRTHTGEKPYKCDQCDYSAADNSTLANHQRKHTGEKPYMCGECGFRTTRKFILSGHMR 1155
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + G + +H R HTGEKPY C +C +R+A A L H++
Sbjct: 1051 YKCDQCDYSTGEKGNLANHQRKHTGEKPYMCEECGYRAARKAHLLLHIR 1099
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
IR ++C C + + + H+RTHTGEKPY C QC F +A + L HL K
Sbjct: 321 IRKHTGEKPYMCGECGHRTAEKSDLARHMRTHTGEKPYKCDQCDFSAAEKSTLDRHLTK 379
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+RT H+GEKPY CG+C +R+A + L H++
Sbjct: 1154 MRTHTGEKPYKCDQCDYSTGEKCNLVRHVRTKHSGEKPYMCGECGYRTAQKSDLSKHMR 1212
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC F +A + L HL K
Sbjct: 84 YMCGVCGYRTERKSNLSLHMRTHTGEKPYKCDQCEFSAAWKSTLDNHLVK 133
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C C Y + + + H+RTHTGEKPY C C + +A + L H++K
Sbjct: 265 MRTHTGEKPYKCGECGYRTADRSTLSRHMRTHTGEKPYKCDHCDYSAADKSTLVKHIRK 323
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + HIRTHTGEKPY C QC + +A + L H +K
Sbjct: 1079 YMCEECGYRAARKAHLLLHIRTHTGEKPYKCDQCDYSAADNSTLANHQRK 1128
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 40/101 (39%), Gaps = 17/101 (16%)
Query: 114 CIYCKAVLSTNLNELIEH-------CRTCK----------SMIRTDPFRHKFVCYACDYF 156
C + A ST N L++H C C +R + C C Y
Sbjct: 117 CEFSAAWKSTLDNHLVKHTGDKPYKCDQCDYSAALKSYLDRHLRIHAVEKPYKCGECGYR 176
Query: 157 SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ + H+RTHTGEKPY C QC + +A L H K
Sbjct: 177 TAQRSALSRHMRTHTGEKPYKCDQCDYSAAQKINLVQHTTK 217
Score = 45.1 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTH GEKPY C QC F +A + L HL
Sbjct: 544 YMCGECGYRTERKSNLSRHMRTHIGEKPYKCDQCDFSAARKSILDKHL 591
Score = 43.9 bits (102), Expect = 0.032, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
++T + C CDY + + +HI HTGEKPY CG+C +R+ + L H+K
Sbjct: 672 MKTHTGEKPYKCDQCDYSAAQKVNLDAHIAAKHTGEKPYMCGECGYRTNQRSTLSRHMK 730
Score = 43.9 bits (102), Expect = 0.036, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H++THTGEKPY C QC + +A L H+
Sbjct: 653 YMCGECGYRAARKFNLSQHMKTHTGEKPYKCDQCDYSAAQKVNLDAHI 700
Score = 43.5 bits (101), Expect = 0.042, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HTGEKPY C QC + + L H +K
Sbjct: 1023 YMCGDCGYMTAYKSDLSKHMRIHTGEKPYKCDQCDYSTGEKGNLANHQRK 1072
Score = 42.7 bits (99), Expect = 0.073, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
++C C + + + H+RTHTGEKPY C QC + + L H++ +
Sbjct: 1135 YMCGECGFRTTRKFILSGHMRTHTGEKPYKCDQCDYSTGEKCNLVRHVRTKH 1186
Score = 42.4 bits (98), Expect = 0.100, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RT + C C + + + H+ HTGEKPY CG C + +A + L H++
Sbjct: 987 RTHTGEKPYKCDQCVFSAAGKSALNQHLAKHTGEKPYMCGDCGYMTAYKSDLSKHMR 1043
Score = 41.2 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H++THTGE+ Y C QC++ + L HL
Sbjct: 710 YMCGECGYRTNQRSTLSRHMKTHTGERRYKCDQCSYSAVQKGDLDKHL 757
Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G M H+ HTGEKPY CG C +R+ + L H++
Sbjct: 69 GDMGRHVVKHTGEKPYMCGVCGYRTERKSNLSLHMR 104
Score = 40.0 bits (92), Expect = 0.56, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C++ + + +H+ HTG+KPY C QC + +A + L HL+
Sbjct: 103 MRTHTGEKPYKCDQCEFSAAWKSTLDNHLVKHTGDKPYKCDQCDYSAALKSYLDRHLR 160
Score = 38.5 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G M H+ TGEKPY CG C +R+A + L H +
Sbjct: 952 GNMGWHVLKQTGEKPYMCGDCGYRTAKKSHLSQHTR 987
>gi|260823066|ref|XP_002604004.1| hypothetical protein BRAFLDRAFT_71707 [Branchiostoma floridae]
gi|229289329|gb|EEN60015.1| hypothetical protein BRAFLDRAFT_71707 [Branchiostoma floridae]
Length = 740
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + H+ THTGEKPY CG+C +R+A L H+K
Sbjct: 159 MRTHTGEKPYKCDQCDYSAVHKSDLDKHLATHTGEKPYMCGECGYRAARKFNLSQHMK 216
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RT + C CDY + + H++ H GEKPY CG+C +R+A + L H++
Sbjct: 104 RTHTGERPYKCDQCDYSAARKSSLDKHLQIHRGEKPYMCGECGYRTAQKSDLSKHMR 160
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++T + C CD+ + + HIR HTGEKPY CG+C +R+ + + L H++
Sbjct: 215 MKTHTGEKPYKCGQCDFSAIQKYDLVKHIRKHTGEKPYMCGECGYRTTTKSDLSRHMR 272
Score = 49.7 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + HIR HTGEKPY C QC + +A + + HLKK
Sbjct: 588 YMCGDCGYRTTQKSHISRHIRIHTGEKPYKCDQCDYSAAQKSSIDQHLKK 637
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
IR ++C C Y + + H+RTHTGEKPY C QC + +A + L HL K
Sbjct: 243 IRKHTGEKPYMCGECGYRTTTKSDLSRHMRTHTGEKPYKCDQCDYSAADKSALTKHLFK 301
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A + L H+ K
Sbjct: 532 YMCGECGYNTTKKDHLLRHMRTHTGEKPYKCDQCDYSAAHKSNLEQHVAK 581
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H++THTGEKPY CGQC F + L H++K
Sbjct: 196 YMCGECGYRAARKFNLSQHMKTHTGEKPYKCGQCDFSAIQKYDLVKHIRK 245
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + H+ HTG KPY CG C +R+ + + H++
Sbjct: 551 MRTHTGEKPYKCDQCDYSAAHKSNLEQHVAKHTGAKPYMCGDCGYRTTQKSHISRHIR 608
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
IR + C CDY + + H++ HTGEKPY CG+C +R+
Sbjct: 607 IRIHTGEKPYKCDQCDYSAAQKSSIDQHLKKHTGEKPYMCGECGYRA 653
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Query: 121 LSTNLNELIEHCRTC------KSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTH 170
+ T+ E C C KS + F+H + C C + + + + H+RTH
Sbjct: 271 MRTHTGEKPYKCDQCDYSAADKSALTKHLFKHSDENPYTCGECGFKTDSNSHLSRHMRTH 330
Query: 171 TGEKPYACGQCAFRSASVAGLHYHLKK 197
TGEKPY C C F +A + + H++K
Sbjct: 331 TGEKPYKCDLCDFAAADKSSFNRHVRK 357
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGEKPY C QC + + + L HL
Sbjct: 140 YMCGECGYRTAQKSDLSKHMRTHTGEKPYKCDQCDYSAVHKSDLDKHL 187
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + H RTHTGE+PY C QC + +A + L HL+
Sbjct: 84 YMCGECGYRTERKSNFSRHTRTHTGERPYKCDQCDYSAARKSSLDKHLQ 132
Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G M H+ HTG KPY CG+C +R+ + H +
Sbjct: 69 GDMERHVVKHTGAKPYMCGECGYRTERKSNFSRHTR 104
>gi|444516263|gb|ELV11094.1| RE1-silencing transcription factor [Tupaia chinensis]
Length = 979
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 15/116 (12%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C + +R
Sbjct: 194 CDRCGY-----NTNRYDHYTAHLKHHTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 248
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R + C C+YFS H+RTHTGEKP+ C QC++ +++ + H ++ ++
Sbjct: 249 RKVYTCGKCNYFSDRKNNYVQHVRTHTGEKPFKCDQCSYVASNQHEVTRHARQVHN 304
Score = 37.7 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 8/89 (8%)
Query: 112 PF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
PF C C V ++N +E+ H R + P C CDY + + + H+ H
Sbjct: 279 PFKCDQCSYV-ASNQHEVTRHAR----QVHNGP--KPLNCPHCDYKTADRSNFKKHVELH 331
Query: 171 TGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+ + C C + ++ L YH K +
Sbjct: 332 VNPRQFNCPVCDYAASKKCNLQYHFKSKH 360
>gi|260808995|ref|XP_002599292.1| hypothetical protein BRAFLDRAFT_199914 [Branchiostoma floridae]
gi|229284569|gb|EEN55304.1| hypothetical protein BRAFLDRAFT_199914 [Branchiostoma floridae]
Length = 516
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CDY + + H+ THTGEKP+ACGQC +R A+ + L HLK
Sbjct: 42 FKCDHCDYSAVRKAHLNDHMTTHTGEKPFACGQCGYRLATKSSLSQHLK 90
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C CDY + + SH+ THTGEKPY C QC + +A L HL K
Sbjct: 264 FKCDQCDYLAARKAHLDSHLITHTGEKPYTCDQCDYSAAHKLSLDNHLAK 313
Score = 42.7 bits (99), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+R ++C C Y + + H RTHTGEKPY C QC + +A L HL
Sbjct: 117 VRQHSGEKAYICRECGYSTSRRYMLSRHKRTHTGEKPYKCDQCDYSAARKHHLDIHL 173
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CDY + + H+ TH EKP+ CG+C + +A + L HLK
Sbjct: 320 FNCDQCDYRAVRKSHLNDHLATHAEEKPFVCGECGYSTAVKSNLFQHLK 368
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
RT + C CDY + + H+ THTGEKPY C QC + +A L HL K
Sbjct: 146 RTHTGEKPYKCDQCDYSAARKHHLDIHLLTHTGEKPYTCDQCDYSAAHKLSLDNHLAK 203
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + + +H+ HTGEKP+AC QC + + + L+ H+K
Sbjct: 182 YTCDQCDYSAAHKLSLDNHLAKHTGEKPFACDQCDYTAVRKSHLNDHMK 230
Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
C CDY + + H+R HTGEKPY C C R+ + L H+K
Sbjct: 378 CDHCDYSATRKSHLNRHLRKHTGEKPYMCRVCGLRTGDKSFLAQHMK 424
Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTG-EKPYACGQCAFRSASVAGLHYHLKK 197
++VC C Y + + H RTHT EKPY C QC + + A L HL K
Sbjct: 459 RYVCGECGYRTVESSSLSKHQRTHTDREKPYKCDQCDYSAMQKASLDTHLAK 510
Score = 39.3 bits (90), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F C CDY + + H++TH KP++CG C +R+A + L HL
Sbjct: 210 FACDQCDYTAVRKSHLNDHMKTHN--KPFSCGDCGYRTALKSNLSQHL 255
Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H++THTGEKP+ C C + + +GL HL +
Sbjct: 404 YMCRVCGLRTGDKSFLAQHMKTHTGEKPHKCDYCDYSALRKSGLDAHLAR 453
Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
RT + C+ CDY + + + +H+ HTG+KP+ C C + + A L+ H+
Sbjct: 6 RTHTGEKPYKCHLCDYSAAHKLSLDNHVAKHTGDKPFKCDHCDYSAVRKAHLNDHM 61
Score = 35.8 bits (81), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C Y + H++TH EKP+ CG C F +A+ L+ H+++
Sbjct: 70 FACGQCGYRLATKSSLSQHLKTHKVEKPFKCGLCNFSTATEITLNKHVRQ 119
>gi|162287237|ref|NP_001104593.1| zinc finger protein isoform 2 [Ciona intestinalis]
gi|70571667|dbj|BAE06798.1| zinc finger protein [Ciona intestinalis]
gi|93003004|tpd|FAA00085.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 605
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 10/71 (14%)
Query: 127 ELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
EL H R + PFR C CDY S I +R H R+HTGE+PY+C +C A
Sbjct: 364 ELTRHTRYIHT--HEKPFR----CTLCDYASVEISKLRRHFRSHTGERPYSCEECGKAFA 417
Query: 187 SVAGLHYHLKK 197
+HLK+
Sbjct: 418 D----SFHLKR 424
>gi|340377731|ref|XP_003387382.1| PREDICTED: histone-lysine N-methyltransferase PRDM9-like
[Amphimedon queenslandica]
Length = 621
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 42/147 (28%), Positives = 61/147 (41%), Gaps = 33/147 (22%)
Query: 79 CKHCHSQLSHLDLLD-----------HCKTC--SYMIRPNANNTF------SPF-CIYCK 118
C++C+ + L+ HC+ C S+ IR N + P+ C YC
Sbjct: 460 CEYCNKSFTQRGSLNTHIRIHTGETYHCQYCDKSFTIRDNLDRHIRTHTGEKPYHCEYCD 519
Query: 119 AVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAC 178
A +T+ +L H IR + C CD G + +HIRTHTGEKPY C
Sbjct: 520 ASFTTS-GDLNRH-------IRIHTGEKPYHCEYCDASFTESGTLNTHIRTHTGEKPYHC 571
Query: 179 GQCAFRSASVAGLHYHLK-----KTYH 200
C + L+ H++ K YH
Sbjct: 572 KYCDASFTTSGHLNTHIRIHTGEKPYH 598
>gi|260786739|ref|XP_002588414.1| hypothetical protein BRAFLDRAFT_63363 [Branchiostoma floridae]
gi|229273576|gb|EEN44425.1| hypothetical protein BRAFLDRAFT_63363 [Branchiostoma floridae]
Length = 2358
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 122 STNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
+T + L+EH K P++ C CDY + + H+ HTG+KP+ACG+C
Sbjct: 881 ATQRDILLEHM---KEHTGEKPYK----CDQCDYSAVRKHHLEQHMAKHTGDKPFACGEC 933
Query: 182 AFRSASVAGLHYHLKKTYH 200
FR+A +A L H KT H
Sbjct: 934 GFRTAHIAALSRH--KTTH 950
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 17/119 (14%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C + +Q HLD +H M++ N + C C + N L +H RT
Sbjct: 2167 CDYSAAQKGHLD--EHI-----MVKHNDEKPY--MCEDCGYKTANRWN-LSQHRRTHTG- 2215
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
P++ C CDY + + H+ HTGEKPY C +C +R+A A L H++K
Sbjct: 2216 --DKPYK----CDHCDYSAARKHHLSQHMAKHTGEKPYMCAECGYRTADKANLSRHMRK 2268
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 17/119 (14%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C + +Q HLD +H M++ N F C C + + N L +H K
Sbjct: 1664 CDYSAAQKGHLD--EHV-----MVKHNCQKPF--MCDVCGYRTANSWN-LSQHR---KKH 1710
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
P++ C C+Y + ++ H+ HTGEKPY CG+C +R+A+ L H+ K
Sbjct: 1711 TGEKPYK----CDQCNYSALRKHHLKQHMARHTGEKPYLCGKCGYRTANRCNLSRHMAK 1765
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 146 HKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
H ++C+ CDY + + H++ HTG+KPY C QC F + L H+
Sbjct: 2018 HTYICWKCDYRATEKDVLLEHVKEHTGQKPYKCDQCDFSAEQKGDLDQHV 2067
Score = 50.1 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+H F+C+ C Y + + H++ HTGEKPY C QC + + L H+ K
Sbjct: 869 QHTFICWQCGYRATQRDILLEHMKEHTGEKPYKCDQCDYSAVRKHHLEQHMAK 921
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 128 LIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH-TGEKPYACGQCAFRSA 186
L +H TCK R F C CDY S H+ H TGEKPY CG+C +R+A
Sbjct: 1028 LSKHKTTCKGE------RGPFKCGYCDYTSTGRHNRDRHVMIHHTGEKPYMCGECGYRTA 1081
Query: 187 SVAGLHYHLK 196
+ L H+K
Sbjct: 1082 VKSSLARHMK 1091
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C + + +I + H TH GEKPY C +C +R+A +A L H +K
Sbjct: 928 FACGECGFRTAHIAALSRHKTTHNGEKPYICEECGYRTAIMAQLTIHKRK 977
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 25/47 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
F C CDY + + H+ HTGEKPY C C +R+A + L H
Sbjct: 1196 FACDQCDYSTTRKNHLDQHMAKHTGEKPYVCEDCGYRTAKIGNLSNH 1242
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + H +THTGEKP+ C +C +R+A L H +K
Sbjct: 1140 YKCGQCDYKTASSSAFSHHKKTHTGEKPFVCDECGYRTAKSWNLSMHKRK 1189
Score = 47.0 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIR-THTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT F C CDY + G + HI HTGEKPY C C +R+ ++ L H +K
Sbjct: 1536 VRTHTGEKPFKCNQCDYSAAQKGHLDEHIIIKHTGEKPYMCEDCGYRTVTMYRLSQHKRK 1595
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 43/158 (27%), Positives = 62/158 (39%), Gaps = 45/158 (28%)
Query: 78 LCKHC-HSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNE----LIEH 131
LC+ C + S L H TC PF C YC + N +I H
Sbjct: 1014 LCEDCGYKTASRRHLSKHKTTC--------KGERGPFKCGYCDYTSTGRHNRDRHVMIHH 1065
Query: 132 -------CRTC--KSMIRTDPFRH--------KFVCYACDYFSYNIGCMRSHIRT----- 169
C C ++ +++ RH + C CDY + + H+RT
Sbjct: 1066 TGEKPYMCGECGYRTAVKSSLARHMKTHTGEKPYKCDQCDYSAVQKSHLDEHVRTKHSSD 1125
Query: 170 --------HTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
HT EKPY CGQC +++AS + +H KKT+
Sbjct: 1126 KDHNGSTNHTDEKPYKCGQCDYKTASSSAFSHH-KKTH 1162
Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+VC C Y + IG + +H R HTGEKPY C C + +A L H K
Sbjct: 1224 YVCEDCGYRTAKIGNLSNHRRIHTGEKPYKCDLCDYSAARRHHLDQHRAK 1273
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + H HTGEKPY CG+C +RS + H +K
Sbjct: 1252 YKCDLCDYSAARRHHLDQHRAKHTGEKPYMCGECGYRSGDSGNISRHKRK 1301
Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F C C Y + + HI+THTGEKPY C QC + +A L H+
Sbjct: 2077 FECRECGYRTAIKSHLSRHIKTHTGEKPYKCDQCDYSAAQKGRLDEHV 2124
Score = 44.7 bits (104), Expect = 0.021, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 11/77 (14%)
Query: 132 CRTC--KSMIRTDPFRH--------KFVCYACDYFSYNIGCMRSH-IRTHTGEKPYACGQ 180
CR C ++ I++ RH + C CDY + G + H I HT EKPY C
Sbjct: 2079 CRECGYRTAIKSHLSRHIKTHTGEKPYKCDQCDYSAAQKGRLDEHVIAKHTNEKPYVCED 2138
Query: 181 CAFRSASVAGLHYHLKK 197
C F++A+ L H +K
Sbjct: 2139 CGFKTATKHHLSQHKRK 2155
Score = 43.5 bits (101), Expect = 0.046, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 148 FVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + G + H+ T HTGEKPY C C +R+A L H +K
Sbjct: 1602 YKCDQCDYSAAQKGHLDEHVITKHTGEKPYMCEDCEYRTAYKHHLSQHKRK 1652
Score = 43.5 bits (101), Expect = 0.048, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + + H R HTGEKPY C QC + +A L H+
Sbjct: 1574 YMCEDCGYRTVTMYRLSQHKRKHTGEKPYKCDQCDYSAAQKGHLDEHV 1621
Score = 43.1 bits (100), Expect = 0.056, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+C C Y + + H+RTHTGEKP+ C QC + +A L H+
Sbjct: 1518 ICKDCGYRAPCEAKLTLHVRTHTGEKPFKCNQCDYSAAQKGHLDEHI 1564
Score = 43.1 bits (100), Expect = 0.065, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
FVC C Y + + H R HTG+KP+AC QC + + L H+ K
Sbjct: 1168 FVCDECGYRTAKSWNLSMHKRKHTGDKPFACDQCDYSTTRKNHLDQHMAK 1217
Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+VC C + + + H R HTGEKPY C QC + +A L H+
Sbjct: 2134 YVCEDCGFKTATKHHLSQHKRKHTGEKPYKCDQCDYSAAQKGHLDEHI 2181
Score = 41.2 bits (95), Expect = 0.24, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C+Y + + H R HTGEKP+ C QC + +A L H+
Sbjct: 1631 YMCEDCEYRTAYKHHLSQHKRKHTGEKPFKCDQCDYSAAQKGHLDEHV 1678
Score = 38.1 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + + H R HTGEK Y C QC + S L H+
Sbjct: 956 YICEECGYRTAIMAQLTIHKRKHTGEKLYKCDQCDYSSIWKCNLDQHV 1003
>gi|260823098|ref|XP_002604020.1| hypothetical protein BRAFLDRAFT_71691 [Branchiostoma floridae]
gi|229289345|gb|EEN60031.1| hypothetical protein BRAFLDRAFT_71691 [Branchiostoma floridae]
Length = 401
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CDY + + H+ HTGEKPY CG+C FR+A + H++
Sbjct: 279 MRTHTGEKPFKCDQCDYSAARKSTLDKHLAKHTGEKPYMCGECGFRAAQKSNFSRHMR 336
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + N + H+R HTGEKPY CG+C +R+ + + L H++
Sbjct: 176 YMCGECRYRTGNKSHLAEHLRIHTGEKPYKCGECEYRTTTKSSLSKHMR 224
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+ C C+Y + + H+RTHTGEKPY C QC + +A + L+ H
Sbjct: 204 YKCGECEYRTTTKSSLSKHMRTHTGEKPYKCDQCDYSAAVKSHLNQH 250
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSAS 187
+RT + C CDY + + H +TH+GEKP+ CG+C +R+A
Sbjct: 335 MRTHTGEKPYKCDQCDYSAVEKHQLIGHQKTHSGEKPFMCGECGYRTAD 383
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + H+RTHTGEKP+ C QC + +A + L HL K
Sbjct: 260 YMCEKCGYRVAQKCDLSRHMRTHTGEKPFKCDQCDYSAARKSTLDKHLAK 309
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C + + H+RTHTGEKPY C QC + + L H K
Sbjct: 316 YMCGECGFRAAQKSNFSRHMRTHTGEKPYKCDQCDYSAVEKHQLIGHQK 364
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G M + HTGEKPY CG+C +R+ + + L HL+
Sbjct: 161 GKMGRRVVKHTGEKPYMCGECRYRTGNKSHLAEHLR 196
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H THT +KPY C +C +R A L H++
Sbjct: 223 MRTHTGEKPYKCDQCDYSAAVKSHLNQHQVTHTSQKPYMCEKCGYRVAQKCDLSRHMR 280
>gi|260823032|ref|XP_002603987.1| hypothetical protein BRAFLDRAFT_71725 [Branchiostoma floridae]
gi|229289312|gb|EEN59998.1| hypothetical protein BRAFLDRAFT_71725 [Branchiostoma floridae]
Length = 363
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C CDY + C+ H+RTHTGEKPY C QC + +A L H K+
Sbjct: 308 YMCGECDYRTNRRPCLTRHMRTHTGEKPYKCDQCDYAAAQKGTLDKHRKQ 357
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+R HTGEKPY CG+C +R+A A L+ H++
Sbjct: 144 YKCDQCDYAASVKSYLDQHLRKHTGEKPYMCGECGYRAAHNATLNRHMR 192
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 10/83 (12%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C Y + L TNL+ I +RT + + C CDY + + H+ HTGE
Sbjct: 256 CEY-RTDLKTNLSRHI---------MRTHTGQKPYKCDQCDYSAALKCDLDYHVANHTGE 305
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
KPY CG+C +R+ L H++
Sbjct: 306 KPYMCGECDYRTNRRPCLTRHMR 328
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 148 FVCYACDYFSYNIGCMRSHI-RTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C C+Y + + HI RTHTG+KPY C QC + +A L YH+
Sbjct: 251 YACEECEYRTDLKTNLSRHIMRTHTGQKPYKCDQCDYSAALKCDLDYHV 299
Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+RTHTG KP+ C QC + + + L H K
Sbjct: 172 YMCGECGYRAAHNATLNRHMRTHTGVKPHKCDQCDYSAIQKSALDQHRTK 221
Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 165 SHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
H+ HTGEKPYAC +C +R+ L H+ +T+
Sbjct: 240 QHLARHTGEKPYACEECEYRTDLKTNLSRHIMRTH 274
>gi|440903361|gb|ELR54032.1| hypothetical protein M91_21394 [Bos grunniens mutus]
Length = 1058
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C + +R
Sbjct: 217 CDRCGY-----NTNRYDHYTAHLKHHTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 271
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 272 RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 323
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEH 131
KH H++ + + C C+Y R + N F C S N ++H
Sbjct: 235 KH-HTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFPRKVYTCGKCNYFSDRKNNYVQH 293
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 294 -------VRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 346
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 347 TRHARQVHN 355
Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 307 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR--- 351
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 352 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 408
Query: 197 KTY 199
+
Sbjct: 409 SKH 411
>gi|440903360|gb|ELR54031.1| RE1-silencing transcription factor [Bos grunniens mutus]
Length = 1006
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C + +R
Sbjct: 217 CDRCGY-----NTNRYDHYTAHLKHHTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 271
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 272 RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 323
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEH 131
KH H++ + + C C+Y R + N F C S N ++H
Sbjct: 235 KH-HTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFPRKVYTCGKCNYFSDRKNNYVQH 293
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 294 -------VRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 346
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 347 TRHARQVHN 355
Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 307 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR--- 351
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 352 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 408
Query: 197 KTY 199
+
Sbjct: 409 SKH 411
>gi|426344417|ref|XP_004038766.1| PREDICTED: RE1-silencing transcription factor [Gorilla gorilla
gorilla]
Length = 1114
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C + +R
Sbjct: 251 CDRCGY-----NTNRYDHYTAHLKHHTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 305
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 306 RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 357
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEH 131
KH H++ + + C C+Y R + N F C S N ++H
Sbjct: 269 KH-HTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFPRKVYTCGKCNYFSDRKNNYVQH 327
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 328 -------VRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 380
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 381 TRHARQVHN 389
Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 341 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR--- 385
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 386 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 442
Query: 197 KTY 199
+
Sbjct: 443 SKH 445
>gi|1142657|gb|AAA98503.1| X2 box repressor [Homo sapiens]
Length = 1088
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C + +R
Sbjct: 217 CDRCGY-----NTNRYDHYTAHLKHHTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 271
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 272 RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 323
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEH 131
KH H++ + + C C+Y R + N F C S N ++H
Sbjct: 235 KH-HTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFPRKVYTCGKCNYFSDRKNNYVQH 293
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 294 -------VRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 346
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 347 TRHARQVHN 355
Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 307 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR--- 351
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 352 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 408
Query: 197 KTY 199
+
Sbjct: 409 SKH 411
>gi|1621501|gb|AAB17211.1| REST protein [Homo sapiens]
Length = 1097
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C + +R
Sbjct: 218 CDRCGY-----NTNRYDHYTAHLKHHTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 272
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 273 RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 324
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEH 131
KH H++ + + C C+Y R + N F C S N ++H
Sbjct: 236 KH-HTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFPRKVYTCGKCNYFSDRKNNYVQH 294
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 295 -------VRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 347
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 348 TRHARQVHN 356
Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 308 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR--- 352
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 353 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 409
Query: 197 KTY 199
+
Sbjct: 410 SKH 412
>gi|410957601|ref|XP_003985414.1| PREDICTED: LOW QUALITY PROTEIN: RE1-silencing transcription factor
[Felis catus]
Length = 1077
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C + +R
Sbjct: 249 CDRCGY-----NTNRYDHYTAHLKHHTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 303
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 304 RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 355
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEH 131
KH H++ + + C C+Y R + N F C S N ++H
Sbjct: 267 KH-HTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFPRKVYTCGKCNYFSDRKNNYVQH 325
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 326 -------VRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 378
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 379 TRHARQVHN 387
Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 339 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR--- 383
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 384 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 440
Query: 197 KTY 199
+
Sbjct: 441 SKH 443
>gi|403284745|ref|XP_003933717.1| PREDICTED: LOW QUALITY PROTEIN: RE1-silencing transcription factor
[Saimiri boliviensis boliviensis]
Length = 1190
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C + +R
Sbjct: 297 CDRCGY-----NTNRYDHYTAHLKHHTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 351
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 352 RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 403
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEH 131
KH H++ + + C C+Y R + N F C S N ++H
Sbjct: 315 KH-HTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFPRKVYTCGKCNYFSDRKNNYVQH 373
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 374 -------VRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 426
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 427 TRHARQVHN 435
Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 387 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR--- 431
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 432 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 488
Query: 197 KTY 199
+
Sbjct: 489 SKH 491
>gi|402869727|ref|XP_003898899.1| PREDICTED: RE1-silencing transcription factor [Papio anubis]
Length = 1304
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C + +R
Sbjct: 427 CDRCGY-----NTNRYDHYTAHLKHHTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 481
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 482 RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 533
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEH 131
KH H++ + + C C+Y R + N F C S N ++H
Sbjct: 445 KH-HTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFPRKVYTCGKCNYFSDRKNNYVQH 503
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 504 -------VRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 556
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 557 TRHARQVHN 565
Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 517 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR--- 561
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 562 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 618
Query: 197 KTY 199
+
Sbjct: 619 SKH 621
>gi|397469833|ref|XP_003806544.1| PREDICTED: RE1-silencing transcription factor [Pan paniscus]
Length = 1097
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C + +R
Sbjct: 218 CDRCGY-----NTNRYDHYTAHLKHHTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 272
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 273 RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 324
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEH 131
KH H++ + + C C+Y R + N F C S N ++H
Sbjct: 236 KH-HTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFPRKVYTCGKCNYFSDRKNNYVQH 294
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 295 -------VRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 347
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 348 TRHARQVHN 356
Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 308 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR--- 352
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 353 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 409
Query: 197 KTY 199
+
Sbjct: 410 SKH 412
>gi|395851383|ref|XP_003798239.1| PREDICTED: RE1-silencing transcription factor, partial [Otolemur
garnettii]
Length = 1172
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C + +R
Sbjct: 323 CDRCGY-----NTNRYDHYTAHLKHHTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 377
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 378 RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 429
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEH 131
KH H++ + + C C+Y R + N F C S N ++H
Sbjct: 341 KH-HTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFPRKVYTCGKCNYFSDRKNNYVQH 399
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 400 -------VRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 452
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 453 TRHARQVHN 461
Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 413 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR--- 457
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 458 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 514
Query: 197 KTY 199
+
Sbjct: 515 SKH 517
>gi|395734951|ref|XP_002814806.2| PREDICTED: RE1-silencing transcription factor [Pongo abelii]
Length = 1097
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C + +R
Sbjct: 218 CDRCGY-----NTNRYDHYTAHLKHHTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 272
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 273 RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 324
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEH 131
KH H++ + + C C+Y R + N F C S N ++H
Sbjct: 236 KH-HTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFPRKVYTCGKCNYFSDRKNNYVQH 294
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 295 -------VRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 347
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 348 TRHARQVHN 356
Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 308 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR--- 352
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 353 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 409
Query: 197 KTY 199
+
Sbjct: 410 SKH 412
>gi|390460850|ref|XP_002745853.2| PREDICTED: LOW QUALITY PROTEIN: RE1-silencing transcription factor
[Callithrix jacchus]
Length = 1244
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C + +R
Sbjct: 385 CDRCGY-----NTNRYDHYTAHLKHHTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 439
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 440 RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 491
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEH 131
KH H++ + + C C+Y R + N F C S N ++H
Sbjct: 403 KH-HTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFPRKVYTCGKCNYFSDRKNNYVQH 461
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 462 -------VRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 514
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 515 TRHARQVHN 523
Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 475 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR--- 519
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 520 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 576
Query: 197 KTY 199
+
Sbjct: 577 SKH 579
>gi|355687404|gb|EHH25988.1| Neural-restrictive silencer factor [Macaca mulatta]
Length = 1095
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C + +R
Sbjct: 218 CDRCGY-----NTNRYDHYTAHLKHHTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 272
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 273 RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 324
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEH 131
KH H++ + + C C+Y R + N F C S N ++H
Sbjct: 236 KH-HTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFPRKVYTCGKCNYFSDRKNNYVQH 294
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 295 -------VRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 347
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 348 TRHARQVHN 356
Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 308 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR--- 352
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 353 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 409
Query: 197 KTY 199
+
Sbjct: 410 SKH 412
>gi|345779728|ref|XP_539282.3| PREDICTED: RE1-silencing transcription factor [Canis lupus
familiaris]
Length = 996
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C + +R
Sbjct: 217 CDRCGY-----NTNRYDHYTAHLKHHTRAGDNERVYKCIICTYTTISEYHWRKHLRNHFP 271
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 272 RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 323
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEH 131
KH H++ + + C C+Y R + N F C S N ++H
Sbjct: 235 KH-HTRAGDNERVYKCIICTYTTISEYHWRKHLRNHFPRKVYTCGKCNYFSDRKNNYVQH 293
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 294 -------VRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 346
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 347 TRHARQVHN 355
Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 307 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR--- 351
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 352 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 408
Query: 197 KTY 199
+
Sbjct: 409 SKH 411
>gi|332819700|ref|XP_526617.3| PREDICTED: RE1-silencing transcription factor isoform 2 [Pan
troglodytes]
gi|332819702|ref|XP_003310418.1| PREDICTED: RE1-silencing transcription factor isoform 1 [Pan
troglodytes]
Length = 1097
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C + +R
Sbjct: 218 CDRCGY-----NTNRYDHYTAHLKHHTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 272
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 273 RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 324
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEH 131
KH H++ + + C C+Y R + N F C S N ++H
Sbjct: 236 KH-HTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFPRKVYTCGKCNYFSDRKNNYVQH 294
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 295 -------VRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 347
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 348 TRHARQVHN 356
Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 308 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR--- 352
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 353 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 409
Query: 197 KTY 199
+
Sbjct: 410 SKH 412
>gi|332238531|ref|XP_003268454.1| PREDICTED: RE1-silencing transcription factor isoform 1 [Nomascus
leucogenys]
gi|332238533|ref|XP_003268455.1| PREDICTED: RE1-silencing transcription factor isoform 2 [Nomascus
leucogenys]
gi|332238535|ref|XP_003268456.1| PREDICTED: RE1-silencing transcription factor isoform 3 [Nomascus
leucogenys]
Length = 1097
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C + +R
Sbjct: 218 CDRCGY-----NTNRYDHYTAHLKHHTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 272
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 273 RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 324
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEH 131
KH H++ + + C C+Y R + N F C S N ++H
Sbjct: 236 KH-HTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFPRKVYTCGKCNYFSDRKNNYVQH 294
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 295 -------VRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 347
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 348 TRHARQVHN 356
Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 308 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR--- 352
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 353 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 409
Query: 197 KTY 199
+
Sbjct: 410 SKH 412
>gi|301765478|ref|XP_002918157.1| PREDICTED: RE1-silencing transcription factor-like [Ailuropoda
melanoleuca]
Length = 1008
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C + +R
Sbjct: 217 CDRCGY-----NTNRYDHYTAHLKHHTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 271
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 272 RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 323
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEH 131
KH H++ + + C C+Y R + N F C S N ++H
Sbjct: 235 KH-HTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFPRKVYTCGKCNYFSDRKNNYVQH 293
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 294 -------VRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 346
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 347 TRHARQVHN 355
Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 307 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR--- 351
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 352 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 408
Query: 197 KTY 199
+
Sbjct: 409 SKH 411
>gi|297292851|ref|XP_002804152.1| PREDICTED: RE1-silencing transcription factor-like [Macaca mulatta]
Length = 1187
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C + +R
Sbjct: 316 CDRCGY-----NTNRYDHYTAHLKHHTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 370
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 371 RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 422
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEH 131
KH H++ + + C C+Y R + N F C S N ++H
Sbjct: 334 KH-HTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFPRKVYTCGKCNYFSDRKNNYVQH 392
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 393 -------VRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 445
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 446 TRHARQVHN 454
Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 406 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR--- 450
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 451 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 507
Query: 197 KTY 199
+
Sbjct: 508 SKH 510
>gi|297475892|ref|XP_002688313.1| PREDICTED: RE1-silencing transcription factor [Bos taurus]
gi|296486531|tpg|DAA28644.1| TPA: hypothetical LOC615792 [Bos taurus]
Length = 1004
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C + +R
Sbjct: 217 CDRCGY-----NTNRYDHYTAHLKHHTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 271
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 272 RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 323
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEH 131
KH H++ + + C C+Y R + N F C S N ++H
Sbjct: 235 KH-HTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFPRKVYTCGKCNYFSDRKNNYVQH 293
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 294 -------VRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 346
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 347 TRHARQVHN 355
Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 307 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR--- 351
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 352 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 408
Query: 197 KTY 199
+
Sbjct: 409 SKH 411
>gi|281352497|gb|EFB28081.1| hypothetical protein PANDA_006561 [Ailuropoda melanoleuca]
Length = 1038
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C + +R
Sbjct: 217 CDRCGY-----NTNRYDHYTAHLKHHTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 271
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 272 RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 323
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEH 131
KH H++ + + C C+Y R + N F C S N ++H
Sbjct: 235 KH-HTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFPRKVYTCGKCNYFSDRKNNYVQH 293
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 294 -------VRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 346
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 347 TRHARQVHN 355
Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 307 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR--- 351
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 352 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 408
Query: 197 KTY 199
+
Sbjct: 409 SKH 411
>gi|194667898|ref|XP_872784.3| PREDICTED: RE1-silencing transcription factor [Bos taurus]
Length = 1004
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C + +R
Sbjct: 217 CDRCGY-----NTNRYDHYTAHLKHHTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 271
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 272 RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 323
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEH 131
KH H++ + + C C+Y R + N F C S N ++H
Sbjct: 235 KH-HTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFPRKVYTCGKCNYFSDRKNNYVQH 293
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 294 -------VRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 346
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 347 TRHARQVHN 355
Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 307 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR--- 351
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 352 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 408
Query: 197 KTY 199
+
Sbjct: 409 SKH 411
>gi|156120409|ref|NP_001095350.1| RE1-silencing transcription factor [Bos taurus]
gi|154425545|gb|AAI51612.1| MGC157163 protein [Bos taurus]
gi|296486548|tpg|DAA28661.1| TPA: hypothetical protein LOC507148 [Bos taurus]
Length = 999
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C + +R
Sbjct: 217 CDRCGY-----NTNRYDHYTAHLKHHTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 271
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 272 RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 323
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEH 131
KH H++ + + C C+Y R + N F C S N ++H
Sbjct: 235 KH-HTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFPRKVYTCGKCNYFSDRKNNYVQH 293
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 294 -------VRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 346
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 347 TRHARQVHN 355
Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 307 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR--- 351
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 352 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 408
Query: 197 KTY 199
+
Sbjct: 409 SKH 411
>gi|124376608|gb|AAI32860.1| RE1-silencing transcription factor [Homo sapiens]
Length = 1097
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C + +R
Sbjct: 218 CDRCGY-----NTNRYDHYTAHLKHHTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 272
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 273 RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 324
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEH 131
KH H++ + + C C+Y R + N F C S N ++H
Sbjct: 236 KH-HTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFPRKVYTCGKCNYFSDRKNNYVQH 294
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 295 -------VRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 347
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 348 TRHARQVHN 356
Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 308 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR--- 352
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 353 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 409
Query: 197 KTY 199
+
Sbjct: 410 SKH 412
>gi|301897974|ref|NP_005603.3| RE1-silencing transcription factor [Homo sapiens]
gi|301897977|ref|NP_001180437.1| RE1-silencing transcription factor [Homo sapiens]
gi|296452989|sp|Q13127.3|REST_HUMAN RecName: Full=RE1-silencing transcription factor; AltName:
Full=Neural-restrictive silencer factor; AltName:
Full=X2 box repressor
gi|119625922|gb|EAX05517.1| RE1-silencing transcription factor, isoform CRA_b [Homo sapiens]
gi|168277848|dbj|BAG10902.1| RE1-silencing transcription factor [synthetic construct]
gi|223460852|gb|AAI36492.1| RE1-silencing transcription factor [Homo sapiens]
Length = 1097
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C + +R
Sbjct: 218 CDRCGY-----NTNRYDHYTAHLKHHTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 272
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 273 RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 324
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEH 131
KH H++ + + C C+Y R + N F C S N ++H
Sbjct: 236 KH-HTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFPRKVYTCGKCNYFSDRKNNYVQH 294
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 295 -------VRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 347
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 348 TRHARQVHN 356
Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 308 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR--- 352
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 353 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 409
Query: 197 KTY 199
+
Sbjct: 410 SKH 412
>gi|62089086|dbj|BAD92987.1| RE1-silencing transcription factor variant [Homo sapiens]
Length = 1126
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C + +R
Sbjct: 247 CDRCGY-----NTNRYDHYTAHLKHHTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 301
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 302 RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 353
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEH 131
KH H++ + + C C+Y R + N F C S N ++H
Sbjct: 265 KH-HTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFPRKVYTCGKCNYFSDRKNNYVQH 323
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 324 -------VRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 376
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 377 TRHARQVHN 385
Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 337 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR--- 381
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 382 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 438
Query: 197 KTY 199
+
Sbjct: 439 SKH 441
>gi|148679349|gb|EDL11296.1| CCCTC-binding factor, isoform CRA_d [Mus musculus]
Length = 638
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ +F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 44.3 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
>gi|148709035|gb|EDL40981.1| human immunodeficiency virus type I enhancer binding protein 1,
isoform CRA_a [Mus musculus]
gi|148709036|gb|EDL40982.1| human immunodeficiency virus type I enhancer binding protein 1,
isoform CRA_a [Mus musculus]
Length = 2687
Score = 53.1 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 102 IRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH--KFVCYACDYFSYN 159
+ P ++ P IY A +++ +++ +E + C ++R + K++C C+
Sbjct: 361 VSPASSTQSPPGPIYSSAHVASVVSQSVE--QMCSLLLRDQKPKKQGKYICEYCNRACAK 418
Query: 160 IGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ HIR+HTGE+PY C C F + + L+ H K H
Sbjct: 419 PSVLLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAH 459
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 2070 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCSYCNFSFKTKGNLTKHMKSKAH 2125
>gi|117938312|ref|NP_031798.2| zinc finger protein 40 [Mus musculus]
gi|225356462|gb|AAI48371.1| Human immunodeficiency virus type I enhancer binding protein 1
[synthetic construct]
gi|225356514|gb|AAI56926.1| Human immunodeficiency virus type I enhancer binding protein 1
[synthetic construct]
Length = 2688
Score = 53.1 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 102 IRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH--KFVCYACDYFSYN 159
+ P ++ P IY A +++ +++ +E + C ++R + K++C C+
Sbjct: 361 VSPASSTQSPPGPIYSSAHVASVVSQSVE--QMCSLLLRDQKPKKQGKYICEYCNRACAK 418
Query: 160 IGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ HIR+HTGE+PY C C F + + L+ H K H
Sbjct: 419 PSVLLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAH 459
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 2071 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCSYCNFSFKTKGNLTKHMKSKAH 2126
>gi|426231736|ref|XP_004009894.1| PREDICTED: RE1-silencing transcription factor-like [Ovis aries]
Length = 997
Score = 53.1 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C + +R
Sbjct: 217 CDRCGY-----NTNRYDHYTAHLKHHTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 271
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 272 RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 323
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEH 131
KH H++ + + C C+Y R + N F C S N ++H
Sbjct: 235 KH-HTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFPRKVYTCGKCNYFSDRKNNYVQH 293
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 294 -------VRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 346
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 347 TRHARQVHN 355
Score = 40.8 bits (94), Expect = 0.34, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 307 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR--- 351
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 352 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 408
Query: 197 KTY 199
+
Sbjct: 409 SKH 411
>gi|260811181|ref|XP_002600301.1| hypothetical protein BRAFLDRAFT_118280 [Branchiostoma floridae]
gi|229285587|gb|EEN56313.1| hypothetical protein BRAFLDRAFT_118280 [Branchiostoma floridae]
Length = 1010
Score = 53.1 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C CDY + G + +H+R HTGEKP+ CGQC + +A + L YH+
Sbjct: 74 YKCDQCDYSAAQKGNLDNHMRKHTGEKPFKCGQCDYSAAHQSSLDYHI 121
Score = 53.1 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C CDY + G + +H+R HTGEKP+ CGQC + +A + L YH+
Sbjct: 204 YKCDQCDYSAAQKGNLDNHMRKHTGEKPFKCGQCDYSAAHQSSLDYHI 251
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C CDY + G + +H+R HTGE+PY C QC + +A L H++K
Sbjct: 46 FKCDQCDYSAALKGSLINHMRQHTGERPYKCDQCDYSAAQKGNLDNHMRK 95
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C CDY + G + +H+R HTGE+PY C QC + +A L H++K
Sbjct: 176 FKCDQCDYSAALKGSLINHMRQHTGERPYKCDQCDYSAAQKGNLDNHMRK 225
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CD+ + G + H+R HTGEKPY C QC + +A L +H++K
Sbjct: 261 YKCNQCDFSTAQKGNLDLHMRKHTGEKPYKCDQCDYSAAQKGHLDHHMRK 310
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 136 KSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
KS + RH +C+ C Y + N + H+RTHTGEKPY C QC++ +A L
Sbjct: 886 KSYLDQHKLRHTGEKPHLCWECGYRTSNRSGLNKHMRTHTGEKPYKCDQCSYCAAQKGKL 945
Query: 192 HYH 194
H
Sbjct: 946 DRH 948
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++ C CDY + + HI HTGEKPY CG+C R+A + L H++
Sbjct: 565 RYTCDQCDYSAARKDSLDRHIAKHTGEKPYICGECGHRTAHRSDLTKHMR 614
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + G + H+R HTGEKP+ C QC + +A L H++K
Sbjct: 289 YKCDQCDYSAAQKGHLDHHMRKHTGEKPFKCDQCDYSAAQKCNLDQHMRK 338
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 31/59 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C C Y + G + H THTGEKPY C +C FR+A A L H +K
Sbjct: 921 MRTHTGEKPYKCDQCSYCAAQKGKLDRHKLTHTGEKPYMCEECGFRTAHRATLTIHKRK 979
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ +C CDY + + + H RTHTGEKPY C QC F +A L+ H+
Sbjct: 663 RLICIECDYRTTSKRDLVRHARTHTGEKPYKCDQCDFSAARKDHLNRHM 711
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 34/103 (33%), Positives = 46/103 (44%), Gaps = 22/103 (21%)
Query: 114 CIYCKAVLSTNLNELIEHCRT-----------CK-SMIRTDPF-RHKF--------VCYA 152
CI C +T+ +L+ H RT C S R D RH F +C
Sbjct: 666 CIECD-YRTTSKRDLVRHARTHTGEKPYKCDQCDFSAARKDHLNRHMFQHSGVKPYMCGD 724
Query: 153 CDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
CDY + + +H+ HTGEKPY CG+C + S L+ HL
Sbjct: 725 CDYRTVRKSDLATHMAIHTGEKPYKCGKCDYSSVRKNALNKHL 767
Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
F C CDY + + H+R HTGEKPY C C + +A L +H+ + +
Sbjct: 317 FKCDQCDYSAAQKCNLDQHMRKHTGEKPYKCDLCDYSAAKKGSLDHHIMRKH 368
Score = 45.1 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+F C CD+ + + H RTHTGEKP+ C QC + +A L H+ K
Sbjct: 788 RFACEKCDFKASAKKDLSRHTRTHTGEKPHKCDQCDYSAAHEFYLKLHMAK 838
Score = 43.1 bits (100), Expect = 0.058, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
CY C Y + + H+R HTGEKP+ C QC + +A L H+++
Sbjct: 20 CYHCKYSAPYKSQLTRHMRKHTGEKPFKCDQCDYSAALKGSLINHMRQ 67
Score = 43.1 bits (100), Expect = 0.069, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
C CDY + + ++ H+ H+GEKPY C +C FR+A + L H
Sbjct: 819 CDQCDYSAAHEFYLKLHMAKHSGEKPYLCDECEFRTAHRSALAKH 863
Score = 41.6 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C+Y + + H HTGEKP+ C +C +R+++ +GL+ H++
Sbjct: 874 YKCDQCNYTAPRKSYLDQHKLRHTGEKPHLCWECGYRTSNRSGLNKHMR 922
Score = 41.2 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C+ C Y + + H+R HTGEKP+ C QC + +A L H+++
Sbjct: 150 CHHCKYSAPYKSQLTRHMRKHTGEKPFKCDQCDYSAALKGSLINHMRQ 197
Score = 40.4 bits (93), Expect = 0.38, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C + + + + H R HTGEKPY C QC + + + L+ H+
Sbjct: 958 YMCEECGFRTAHRATLTIHKRKHTGEKPYKCDQCDYSTRAKNNLNKHM 1005
Score = 37.4 bits (85), Expect = 3.2, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + + H+R H+G+KPY C +C + S L H K
Sbjct: 594 YICGECGHRTAHRSDLTKHMRIHSGDKPYKCDKCDYSSVRKCDLDKHKSK 643
>gi|1731427|sp|Q03172.1|ZEP1_MOUSE RecName: Full=Zinc finger protein 40; AltName: Full=Alpha
A-crystallin-binding protein 1; Short=Alpha A-CRYBP1;
AltName: Full=Alpha A-crystallin-binding protein I;
AltName: Full=Transcription factor alphaA-CRYBP1
gi|818008|gb|AAA98810.1| alphaA-crystallin-binding protein I [Mus musculus]
Length = 2688
Score = 53.1 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 102 IRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH--KFVCYACDYFSYN 159
+ P ++ P IY A +++ +++ +E + C ++R + K++C C+
Sbjct: 361 VSPASSTQSPPGPIYSSAHVASVVSQSVE--QMCSLLLRDQKPKKQGKYICEYCNRACAK 418
Query: 160 IGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ HIR+HTGE+PY C C F + + L+ H K H
Sbjct: 419 PSVLLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAH 459
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 2071 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCSYCNFSFKTKGNLTKHMKSKAH 2126
>gi|350597085|ref|XP_003484355.1| PREDICTED: LOW QUALITY PROTEIN: transcriptional repressor CTCF [Sus
scrofa]
Length = 730
Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 53/124 (42%), Gaps = 15/124 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C HC + ++ L C ++ + ++ C YC AV LI+H ++ K+
Sbjct: 439 CPHCDTVIARKSDLGKCP--XHLRKQHSYIEQGKKCRYCDAVFHERY-ALIQHQKSHKN- 494
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLK 196
+F C CDY M H R HTG KPYAC C FR + +H+
Sbjct: 495 ------EKRFKCDQCDYACRQERHMIMHKRXHTGGKPYACSHCDKTFRQKQLLDMHF--- 545
Query: 197 KTYH 200
K YH
Sbjct: 546 KRYH 549
Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
Score = 35.8 bits (81), Expect = 9.4, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
TD HK C+ C + +R+H+ THTG +P+ C C AF ++ H K T
Sbjct: 289 TDERPHK--CHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHT 346
Query: 199 Y 199
+
Sbjct: 347 H 347
>gi|432848852|ref|XP_004066483.1| PREDICTED: zinc finger protein 436-like [Oryzias latipes]
Length = 655
Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 33/141 (23%)
Query: 79 CKHCHSQLSHLDLLDH------------CKTCSYMIRPNANNTFSPFCIYC-KAVLSTNL 125
CK C SH+ L CK C + +FS IY K + ++
Sbjct: 440 CKDCDISFSHISHLKRHMRTHTGEKPFSCKGC--------DKSFSR--IYSLKTHMRSHT 489
Query: 126 NELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKP 175
E C+ C K+ +RT F C CD ++ ++ H+R HTGEKP
Sbjct: 490 GEKPFSCKGCDKRFSRIYSLKAHMRTHTGEKPFSCKECDTSFRDVSNLKRHMRIHTGEKP 549
Query: 176 YACGQCAFRSASVAGLHYHLK 196
++C +C R ++GL H++
Sbjct: 550 FSCTECDKRFGQISGLKIHMR 570
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C + ++SH+RTHTGEKP++C +C ++ + GL H++
Sbjct: 354 FACMKCTQSFSKLTNLKSHMRTHTGEKPFSCKECGRSNSRINGLKKHMR 402
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T K ++ + +F C CD +I ++ H+RTHTGEKP++C C + + L
Sbjct: 424 TLKKHTKSQTEKKRFSCKDCDISFSHISHLKRHMRTHTGEKPFSCKGCDKSFSRIYSLKT 483
Query: 194 HLK 196
H++
Sbjct: 484 HMR 486
Score = 43.9 bits (102), Expect = 0.037, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 30/61 (49%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT F C CD + SH+RTHTGEKP+ C +C + + L H+
Sbjct: 566 KIHMRTHTREKPFSCKECDKSFSQGSHLNSHMRTHTGEKPFPCKECDKSFSRIYNLKTHM 625
Query: 196 K 196
+
Sbjct: 626 R 626
Score = 43.5 bits (101), Expect = 0.047, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 13/88 (14%)
Query: 112 PF-CIYCKAVLS--TNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIR 168
PF C+ C S TNL KS +RT F C C + I ++ H+R
Sbjct: 353 PFACMKCTQSFSKLTNL----------KSHMRTHTGEKPFSCKECGRSNSRINGLKKHMR 402
Query: 169 THTGEKPYACGQCAFRSASVAGLHYHLK 196
THTG+K ++C +C + + L H K
Sbjct: 403 THTGKKSFSCKECGRSVSRIYTLKKHTK 430
Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 10/89 (11%)
Query: 118 KAVLSTNLNELIEHCRTCKSMIR--TDPFRH--------KFVCYACDYFSYNIGCMRSHI 167
KA + T+ E C+ C + R ++ RH F C CD I ++ H+
Sbjct: 510 KAHMRTHTGEKPFSCKECDTSFRDVSNLKRHMRIHTGEKPFSCTECDKRFGQISGLKIHM 569
Query: 168 RTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RTHT EKP++C +C + + L+ H++
Sbjct: 570 RTHTREKPFSCKECDKSFSQGSHLNSHMR 598
>gi|432848811|ref|XP_004066463.1| PREDICTED: zinc finger protein 135-like [Oryzias latipes]
Length = 503
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
CK C + SH L ++M FS C C S N N L K+
Sbjct: 263 CKECDASFSHRSSLK-----THMRIHTGEKPFS--CNKCDKSFSDN-NSL-------KAH 307
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C ACD N+ ++SH+RTHTGEKP++C +C + + L H++
Sbjct: 308 MRTHTGEKPFSCNACDRSFTNVSNLKSHMRTHTGEKPFSCKECDKSFSHICALKTHMR 365
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 60/144 (41%), Gaps = 18/144 (12%)
Query: 53 MSLDQILNLNLSVLLVTTIPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSP 112
S QI +LN + T + CK C S + L +M + FS
Sbjct: 100 QSFRQIAHLNSHMRTHTGDKPFS---CKECDKSFSQMHSLK-----RHMRTHTEDKPFS- 150
Query: 113 FCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTG 172
C C S N T K+ +RT F C ACD ++ + H+RTHTG
Sbjct: 151 -CQRCDKSFSQN--------NTLKAHMRTHTGEKPFSCNACDRSFSHVSNLNIHMRTHTG 201
Query: 173 EKPYACGQCAFRSASVAGLHYHLK 196
EKP++C +C +V+ L H++
Sbjct: 202 EKPFSCKECDRGFTNVSSLKIHMR 225
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
KS +RT F C CD I + SH+RTHTG+KP++C +C + + L H+
Sbjct: 81 KSHMRTHTGEKPFSCKECDQSFRQIAHLNSHMRTHTGDKPFSCKECDKSFSQMHSLKRHM 140
Query: 196 K 196
+
Sbjct: 141 R 141
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
CK C SH+ C ++M FS CI C S ++ L H
Sbjct: 347 CKECDKSFSHI-----CALKTHMRTHTGEKPFS--CIECDTCFS-RISNLKRH------- 391
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CD + +++H+RTHTGEKP+ C +C + ++ L H++
Sbjct: 392 MRTHTGEKPFSCKECDASFSHRSSLKTHMRTHTGEKPFPCKECDTTFSCLSHLKTHMR 449
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C NI ++SH+RTHTGEKP++C +C +A L+ H++
Sbjct: 65 FACKECTKSFSNITYLKSHMRTHTGEKPFSCKECDQSFRQIAHLNSHMR 113
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 118 KAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHI 167
K+ + T+ E C+ C K+ +RT F C CD I ++ H+
Sbjct: 333 KSHMRTHTGEKPFSCKECDKSFSHICALKTHMRTHTGEKPFSCIECDTCFSRISNLKRHM 392
Query: 168 RTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RTHTGEKP++C +C + + L H++
Sbjct: 393 RTHTGEKPFSCKECDASFSHRSSLKTHMR 421
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CD N+ ++ H+R HTGEKP++C +C + L H++
Sbjct: 196 MRTHTGEKPFSCKECDRGFTNVSSLKIHMRIHTGEKPFSCKECDRSFSHKYALKRHMR 253
Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT F C CD + +++H+R HTGEKP++C +C + L H+
Sbjct: 249 KRHMRTHTGEKPFTCKECDASFSHRSSLKTHMRIHTGEKPFSCNKCDKSFSDNNSLKAHM 308
Query: 196 K 196
+
Sbjct: 309 R 309
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 10/77 (12%)
Query: 115 IYCKAVLSTNLNELIEHCRTCK----------SMIRTDPFRHKFVCYACDYFSYNIGCMR 164
Y K+ + T+ E C+ C S +RT F C CD + ++
Sbjct: 78 TYLKSHMRTHTGEKPFSCKECDQSFRQIAHLNSHMRTHTGDKPFSCKECDKSFSQMHSLK 137
Query: 165 SHIRTHTGEKPYACGQC 181
H+RTHT +KP++C +C
Sbjct: 138 RHMRTHTEDKPFSCQRC 154
>gi|432111609|gb|ELK34711.1| RE1-silencing transcription factor [Myotis davidii]
Length = 1086
Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C + +R
Sbjct: 357 CDRCGY-----NTNRYDHYTAHLKHHTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 411
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 412 RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 463
Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEH 131
KH H++ + + C C+Y R + N F C S N ++H
Sbjct: 375 KH-HTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFPRKVYTCGKCNYFSDRKNNYVQH 433
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 434 -------VRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 486
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 487 TRHARQVHN 495
Score = 40.8 bits (94), Expect = 0.35, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 447 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR--- 491
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 492 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 548
Query: 197 KTY 199
+
Sbjct: 549 SKH 551
>gi|260823012|ref|XP_002603977.1| hypothetical protein BRAFLDRAFT_71735 [Branchiostoma floridae]
gi|229289302|gb|EEN59988.1| hypothetical protein BRAFLDRAFT_71735 [Branchiostoma floridae]
Length = 1154
Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 35/63 (55%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T +RT ++ C CDY + G + H+ THTGEKP+ CG+C R+A + L
Sbjct: 1033 TLSRHMRTHTGERRYKCDQCDYSAVQKGDLDKHLATHTGEKPFMCGECGHRTARKSNLSR 1092
Query: 194 HLK 196
H++
Sbjct: 1093 HMR 1095
Score = 52.8 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 62/138 (44%), Gaps = 23/138 (16%)
Query: 78 LCKHCHSQLS-HLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEH----- 131
+C HC + + L L H +T + RP N C Y ST L +H
Sbjct: 360 MCDHCGYRTAIKLHLSRHMRTHTGE-RPFKCNQ----CDYSATHKSTLDEHLTKHTGEKY 414
Query: 132 --CRTC--KSMIRTDPFRH--------KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACG 179
C+ C ++ +T ++H F C CDY + ++ H+ HTGEKPY CG
Sbjct: 415 YKCKECGYRTTRKTHLYQHMRIHTGQKPFKCDQCDYSAAQKSALKQHLLKHTGEKPYMCG 474
Query: 180 QCAFRSASVAGLHYHLKK 197
+C +R+ + L H++K
Sbjct: 475 ECGYRTTQKSKLSQHMRK 492
Score = 52.8 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C YF+ N + +HIRTHTGEKP+ C QC + +A + L H++
Sbjct: 528 YMCEECGYFTANRSNLTAHIRTHTGEKPFKCDQCDYSAARKSDLSRHIR 576
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C HC LDH ++ + + N + C C + N+L H
Sbjct: 740 CDHCDYSAVQKSSLDH-----HLAKHSGNKPY--MCGEC-GYSTARKNDLSVH------- 784
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IR + C CDY + + H+ THTGEKPY CG+C FR+A + L H++
Sbjct: 785 IRIHTGDKPYKCDQCDYSAAVKSTLDQHLTTHTGEKPYMCGECGFRAAQKSNLSRHMR 842
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 31/59 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
IRT F C CDY + + HIRTHT EKPY C C + +A +GL HL K
Sbjct: 547 IRTHTGEKPFKCDQCDYSAARKSDLSRHIRTHTREKPYKCDHCDYSAAHKSGLDQHLSK 605
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + G + H+ H+GEKP+ CG+C +R+A + L H++
Sbjct: 266 MRTHTGEKPYKCDQCDYSAAEKGHLDQHLMKHSGEKPFMCGECGYRAAQRSNLSQHMR 323
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 29/58 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY S C+ H HTGEKPY C C +R+A L H++
Sbjct: 322 MRTHTGDKPYKCDQCDYSSAQKDCLDKHRTNHTGEKPYMCDHCGYRTAIKLHLSRHMR 379
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F+C C Y + + + H++ H+GEKPY CG+C +R+A L H++
Sbjct: 878 FMCGECGYRTADRSTLSRHMKIHSGEKPYMCGECGYRAAYKYNLSKHMR 926
Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 143 PFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C CDY + + H+ HTGEKPY CG+C FR+ L H++
Sbjct: 218 PYR----CDQCDYSAAQKSQLNKHLTKHTGEKPYMCGECGFRTTYEDSLSRHMR 267
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CDY + + H+ THTGEKPY C +C + +A+ L H++
Sbjct: 1094 MRTHSGEKPFKCNQCDYSAAQKCTLDRHVMTHTGEKPYICEECGYAAANRVELSRHIR 1151
Score = 47.0 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + + C C+Y + + H+ HTGEKPY CG+C R+ + + L H++
Sbjct: 925 MRTHTGQKPYKCDQCNYSAAQKSTLDQHLMKHTGEKPYMCGECGHRTTTKSDLSRHMR 982
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 6/53 (11%)
Query: 148 FVCYACDY---FSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + YN+ H+RTHTG+KPY C QC + +A + L HL K
Sbjct: 906 YMCGECGYRAAYKYNLS---KHMRTHTGQKPYKCDQCNYSAAQKSTLDQHLMK 955
Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H+RTHTGEKPY C QC + +A L HL K
Sbjct: 247 YMCGECGFRTTYEDSLSRHMRTHTGEKPYKCDQCDYSAAEKGHLDQHLMK 296
Score = 44.7 bits (104), Expect = 0.023, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
F+C C Y + + H+RTHTG+KPY C QC + SA L H
Sbjct: 303 FMCGECGYRAAQRSNLSQHMRTHTGDKPYKCDQCDYSSAQKDCLDKH 349
Score = 43.5 bits (101), Expect = 0.052, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 18/101 (17%)
Query: 114 CIYCKAVLSTNLNELIEH-------CRTC--KSMIRTDPFRH--------KFVCYACDYF 156
C Y A ST L++H C C ++ ++D RH ++ C CDY
Sbjct: 939 CNYSAAQKSTLDQHLMKHTGEKPYMCGECGHRTTTKSDLSRHMRIHTGERRYKCDQCDYS 998
Query: 157 SYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
+ +HI HT EKP+ CG+C +R+A + L H++
Sbjct: 999 AAQKVNFDAHIAAKHTSEKPFMCGECGYRTADRSTLSRHMR 1039
Score = 42.7 bits (99), Expect = 0.073, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+ THTGEKPY C C + + + L +HL K
Sbjct: 710 YMCGECGYRTSQRSKLSRHMITHTGEKPYKCDHCDYSAVQKSSLDHHLAK 759
Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C Y + + + H+RTHTGE+ Y C QC + + L HL
Sbjct: 1019 FMCGECGYRTADRSTLSRHMRTHTGERRYKCDQCDYSAVQKGDLDKHL 1066
Score = 42.0 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ H+G KPY CG+C + +A L H++
Sbjct: 738 YKCDHCDYSAVQKSSLDHHLAKHSGNKPYMCGECGYSTARKNDLSVHIR 786
Score = 41.6 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C + + + H+RTH+GEKP+ C QC + +A L H+
Sbjct: 1075 FMCGECGHRTARKSNLSRHMRTHSGEKPFKCNQCDYSAAQKCTLDRHV 1122
Score = 40.8 bits (94), Expect = 0.29, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
IRT + C CDY + + + H+ H+ EKPY CG+C + +A
Sbjct: 575 IRTHTREKPYKCDHCDYSAAHKSGLDQHLSKHSSEKPYMCGECGYWTA 622
Score = 40.4 bits (93), Expect = 0.40, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 148 FVCYACDY-------FSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y S + H++ HTGEKPY C QC + +A + L+ HL K
Sbjct: 184 YMCGKCGYRAAQRSNLSVKKSDLSQHMKIHTGEKPYRCDQCDYSAAQKSQLNKHLTK 240
Score = 38.1 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 136 KSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
KS ++ +H ++C C Y + + H+R HT EKP+ C +C + +A +
Sbjct: 455 KSALKQHLLKHTGEKPYMCGECGYRTTQKSKLSQHMRKHTEEKPFKCDKCDYSAARKSNF 514
Query: 192 HYHLKKTY 199
+ H+ + +
Sbjct: 515 NRHITEKH 522
Score = 37.7 bits (86), Expect = 2.6, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
G + H+ H GEKPY CG+C +R++ + L H+
Sbjct: 695 GNIGRHVVKHIGEKPYMCGECGYRTSQRSKLSRHM 729
>gi|195036772|ref|XP_001989842.1| GH18576 [Drosophila grimshawi]
gi|193894038|gb|EDV92904.1| GH18576 [Drosophila grimshawi]
Length = 371
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%)
Query: 128 LIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSAS 187
+I+ + CK + R P R +VC C + + H+R HTGE+P+AC +C+ R S
Sbjct: 179 IIDSSKDCKKLARAQPERAIYVCELCGKYVNSKVSFDRHMRKHTGERPFACEKCSSRFLS 238
Query: 188 VAGLHYH 194
A L H
Sbjct: 239 AAELRSH 245
>gi|443684050|gb|ELT88094.1| hypothetical protein CAPTEDRAFT_179588 [Capitella teleta]
Length = 642
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 15/87 (17%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFV----CYACDYFSYNIGCMRSHIRT 169
C C A +T+ EL+ H R ++H F C CDY S + ++ H+R+
Sbjct: 183 CKECNASFTTS-GELVRHVR----------YKHTFEKPHRCPNCDYASVELSKLKRHLRS 231
Query: 170 HTGEKPYACGQCAFRSASVAGLHYHLK 196
HTGE+PY C C + S L HL+
Sbjct: 232 HTGERPYQCPHCTYASPDTYKLKRHLR 258
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 27/59 (45%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
K +R+ + C C Y S + ++ H+R HTGEKPY C C R L H
Sbjct: 226 KRHLRSHTGERPYQCPHCTYASPDTYKLKRHLRIHTGEKPYKCDICNTRFTQSNSLKAH 284
Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHL 195
+ C C Y + + + SHI THTGEKP+ C +C FR + H +L
Sbjct: 352 YKCELCPYSALSQRHLESHILTHTGEKPFRCEECDQTFRQKQLLKRHLNL 401
>gi|260823030|ref|XP_002603986.1| hypothetical protein BRAFLDRAFT_71726 [Branchiostoma floridae]
gi|229289311|gb|EEN59997.1| hypothetical protein BRAFLDRAFT_71726 [Branchiostoma floridae]
Length = 277
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + + C CDY + N + H+R HTGEKPY CG+C +R+A + L H++
Sbjct: 187 MRTHTGQKPYKCDQCDYSAANKFDLDKHVRKHTGEKPYMCGECGYRAAQRSTLSRHMR 244
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+R HTGEKPY CG+C +R+A + L H++
Sbjct: 131 MRTHTGEKPYRCDQCDYSAAKKFDLDKHVRKHTGEKPYMCGECGYRAAQRSSLSRHMR 188
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKPY CG+C +R+A L H++
Sbjct: 28 YNCDQCDYSAAGKSALNQHLAKHTGEKPYMCGECGYRTAYKYDLSKHMR 76
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTG+KPY C QC + +A+ L H++K
Sbjct: 168 YMCGECGYRAAQRSSLSRHMRTHTGQKPYKCDQCDYSAANKFDLDKHVRK 217
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C Y + + H+R HTGEKPY C QC + +A + L+ HL K
Sbjct: 1 MCGECGYRTAYKSDLSKHMRIHTGEKPYNCDQCDYSAAGKSALNQHLAK 49
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C Y + + H+RTHTGEKPY C QC + +A L H++K
Sbjct: 113 ICENCGYRAAKKCDLSRHMRTHTGEKPYRCDQCDYSAAKKFDLDKHVRK 161
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
++C C Y + + H+RTHTGEKPY C QC +
Sbjct: 224 YMCGECGYRAAQRSTLSRHMRTHTGEKPYKCDQCDY 259
Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 6/42 (14%)
Query: 148 FVCYACDY---FSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
++C C Y + Y++ H+R HTGEKPY C QC + +A
Sbjct: 56 YMCGECGYRTAYKYDLS---KHMRIHTGEKPYKCDQCDYSAA 94
>gi|62823677|gb|AAY15453.1| CTCF-like protein [Aedes aegypti]
Length = 615
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 15/87 (17%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRT 169
C +C++ +T+ EL+ H R +RH C CDY S + ++ HIR
Sbjct: 184 CKHCESTFTTS-GELVRHVR----------YRHTHEKPHKCPECDYASVELSKLKRHIRC 232
Query: 170 HTGEKPYACGQCAFRSASVAGLHYHLK 196
HTGE+PY C C + S L HL+
Sbjct: 233 HTGERPYQCPHCTYASPDTFKLKRHLR 259
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 50/117 (42%), Gaps = 16/117 (13%)
Query: 79 CKHCHSQLS-HLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKS 137
CKHC S + +L+ H + +P+ P C Y S L++L H R C +
Sbjct: 184 CKHCESTFTTSGELVRHVRYRHTHEKPHK----CPECDYA----SVELSKLKRHIR-CHT 234
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
R + C C Y S + ++ H+R HTGEKPY C C R L H
Sbjct: 235 GERP------YQCPHCTYASPDTFKLKRHLRIHTGEKPYECDVCHARFTQSNSLKAH 285
>gi|260823038|ref|XP_002603990.1| hypothetical protein BRAFLDRAFT_71722 [Branchiostoma floridae]
gi|229289315|gb|EEN60001.1| hypothetical protein BRAFLDRAFT_71722 [Branchiostoma floridae]
Length = 919
Score = 52.8 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 130 EHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
+ C + M RT + C CDY + + + H+R+HTGEKPY CG+C +R+ A
Sbjct: 308 KKCHLSRHM-RTHTGEKPYKCDRCDYSAADKLTLDIHLRSHTGEKPYMCGECGYRATQKA 366
Query: 190 GLHYHLK 196
L H++
Sbjct: 367 HLSRHMR 373
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKPY CG+C FR+A L H++
Sbjct: 213 YKCDQCDYSAVQKSALNQHVGKHTGEKPYMCGECGFRTAQKCNLSVHMR 261
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 17/101 (16%)
Query: 114 CIYCKAVLSTNLNELIEH-------CRTC----------KSMIRTDPFRHKFVCYACDYF 156
C Y AV ST L +H C C +RT ++C C Y
Sbjct: 757 CDYSAAVKSTLYKHLAKHTSKKPYLCGECGYRASRNNDLSIHMRTHTGEKPYMCGKCGYR 816
Query: 157 SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ G + H++THTGEKPY C QC + +A + L H++K
Sbjct: 817 TARRGRLSLHMKTHTGEKPYKCEQCGYSAAEKSNLVKHIRK 857
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+++C C Y ++ + H+RTHTGEKP+ C QC + +A + L+ HL K
Sbjct: 723 RYMCGECGYRAFQKSDLSKHMRTHTGEKPFKCNQCDYSAAVKSTLYKHLAK 773
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++T + C C Y + + HIR HTG+KPY CG+C +R+A + L+ HL+
Sbjct: 827 MKTHTGEKPYKCEQCGYSAAEKSNLVKHIRKHTGDKPYMCGECGYRTAFKSSLYTHLR 884
Score = 50.1 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 11/81 (13%)
Query: 127 ELIEHCRTCKSMI---RTDPFRH--------KFVCYACDYFSYNIGCMRSHIRTHTGEKP 175
+ ++H T S + R D RH ++C C Y + + H+RTHTGEKP
Sbjct: 608 KFLQHDNTSTSQVHESRGDVGRHVVKHTGEKPYMCGECGYRAVQKSDLLVHLRTHTGEKP 667
Query: 176 YACGQCAFRSASVAGLHYHLK 196
Y CG+C +++A + L H++
Sbjct: 668 YMCGECGYKAARKSYLSTHMR 688
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT ++C C Y + + +H+R HTG+KPY C QC + +A + L H+ K
Sbjct: 659 LRTHTGEKPYMCGECGYKAARKSYLSTHMRIHTGDKPYKCDQCDYSAAHKSSLEQHVAK 717
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C+ C Y + + H+RTHTGEKPY C +C + +A L HL+
Sbjct: 297 YMCWECGYRTAKKCHLSRHMRTHTGEKPYKCDRCDYSAADKLTLDIHLR 345
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+R+ ++C C Y + + H+RTHTGE+PY C QC + + + L H +K
Sbjct: 344 LRSHTGEKPYMCGECGYRATQKAHLSRHMRTHTGERPYKCDQCDYSATQKSSLDRHQRK 402
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + + H+ H+GEKPY C +C +R+A L H++
Sbjct: 269 YKCDQCDYSAAHKSSLEQHVAKHSGEKPYMCWECGYRTAKKCHLSRHMR 317
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CDY + + H+ HT +KPY CG+C +R++ L H++
Sbjct: 743 MRTHTGEKPFKCNQCDYSAAVKSTLYKHLAKHTSKKPYLCGECGYRASRNNDLSIHMR 800
Score = 44.7 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+R HTGEKPY C QC + + + L+ H+ K
Sbjct: 185 YMCGECGYRTAHKSDLTIHMRIHTGEKPYKCDQCDYSAVQKSALNQHVGK 234
Score = 43.9 bits (102), Expect = 0.035, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H+R HTGEKPY C QC + +A + L H+ K
Sbjct: 241 YMCGECGFRTAQKCNLSVHMRIHTGEKPYKCDQCDYSAAHKSSLEQHVAK 290
Score = 43.9 bits (102), Expect = 0.036, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + + H+ HTG+K Y CG+C +R+ + L H++
Sbjct: 696 YKCDQCDYSAAHKSSLEQHVAKHTGDKRYMCGECGYRAFQKSDLSKHMR 744
Score = 43.1 bits (100), Expect = 0.057, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
IR ++C C Y + + +H+RTHTG+KPY C QC + + L+ H
Sbjct: 855 IRKHTGDKPYMCGECGYRTAFKSSLYTHLRTHTGDKPYKCDQCDYSAVDKFSLNRH 910
Score = 42.4 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G M H+ H GEKPY CG+C +R+A + L H++
Sbjct: 170 GSMGRHMVKHAGEKPYMCGECGYRTAHKSDLTIHMR 205
>gi|170671926|ref|NP_001116268.1| CCCTC-binding factor (zinc finger protein) [Xenopus (Silurana)
tropicalis]
gi|170284950|gb|AAI61099.1| ctcf protein [Xenopus (Silurana) tropicalis]
Length = 734
Score = 52.8 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 331 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 390
Query: 190 GLHYHLK 196
L H++
Sbjct: 391 KLKRHMR 397
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC V LI+H ++ K+ +F C C+Y M H RTHTGE
Sbjct: 467 CRYCDTVFHERY-ALIQHQKSHKN-------EKRFKCDQCEYACRQERHMIMHKRTHTGE 518
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 519 KPYACSHCDKTFRQKQLLDMHF---KRYH 544
Score = 45.1 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 365 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 424
>gi|148237145|ref|NP_001079930.1| CCCTC-binding factor (zinc finger protein) [Xenopus laevis]
gi|34785484|gb|AAH57697.1| Ctcf protein [Xenopus laevis]
Length = 735
Score = 52.8 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 331 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 390
Query: 190 GLHYHLK 196
L H++
Sbjct: 391 KLKRHMR 397
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC V LI+H ++ K+ +F C C+Y M H RTHTGE
Sbjct: 467 CRYCDTVFHERY-ALIQHQKSHKN-------EKRFKCDQCEYACRQERHMIMHKRTHTGE 518
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 519 KPYACSHCDKTFRQKQLLDMHF---KRYH 544
Score = 45.1 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 365 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 424
>gi|11878220|gb|AAG40852.1|AF305695_1 transcriptional repressor [Xenopus laevis]
Length = 735
Score = 52.8 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 331 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 390
Query: 190 GLHYHLK 196
L H++
Sbjct: 391 KLKRHMR 397
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC V LI+H ++ K+ +F C C+Y M H RTHTGE
Sbjct: 467 CRYCDTVFHERY-ALIQHQKSHKN-------EKRFKCDQCEYACRQERHMIMHKRTHTGE 518
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 519 KPYACSHCDKTFRQKQLLDMHF---KRYH 544
Score = 45.1 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 365 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 424
>gi|260810941|ref|XP_002600181.1| hypothetical protein BRAFLDRAFT_66689 [Branchiostoma floridae]
gi|229285467|gb|EEN56193.1| hypothetical protein BRAFLDRAFT_66689 [Branchiostoma floridae]
Length = 489
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CDY + + H+RTHTGEKPY CGQC +R A+ L H++
Sbjct: 309 MRTHTGERPFTCDQCDYSATQKCALARHMRTHTGEKPYMCGQCGYRVATKHRLSEHIR 366
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+VC C + + N + H++ HTGEKPY CGQC + +A L H+ K
Sbjct: 402 YVCGECGFRTTNKSNLSQHMKRHTGEKPYKCGQCDYSAAHKYSLELHMAK 451
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
IRT + C CD+ S + H H G+KPY CG+C FR+ + + L H+K+
Sbjct: 365 IRTHTGEKPYKCDQCDFSSSWRKSLHQHKAMHAGDKPYVCGECGFRTTNKSNLSQHMKR 423
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 148 FVCYACDYFSYNIGCMRSH-IRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CDY S + H + H+GEKPY CG+C R+AS L H+K
Sbjct: 151 FKCDQCDYSSARQSTLDQHMVYRHSGEKPYMCGECGHRAASRNNLSRHMK 200
Score = 39.3 bits (90), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CD+ S + H+ HTG KP+ CG+C FR+A + + H++
Sbjct: 262 YKCDQCDFSSAWEKSLHQHMIRHTGAKPHLCGECGFRTAHKSYMSKHMR 310
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+C C + + + M H+RTHTGE+P+ C QC + + L H++
Sbjct: 291 LCGECGFRTAHKSYMSKHMRTHTGERPFTCDQCDYSATQKCALARHMR 338
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C C Y + N H+ H ++PY C QC F SA LH H+
Sbjct: 234 YTCVECGYKTDNRSHFTQHVGKHASDEPYKCDQCDFSSAWEKSLHQHM 281
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + + H+ HT +KPY C +C +R+A A L H++
Sbjct: 430 YKCGQCDYSAAHKYSLELHMAKHTDDKPYVCSECGYRAAVKAYLSKHMR 478
Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
I PFR C CDY + + G + H+ HTGEK Y C +C +++ + + H+ K
Sbjct: 201 IHLKPFR----CDQCDYSAADKGRLDRHMLKHTGEKLYTCVECGYKTDNRSHFTQHVGK 255
>gi|260823270|ref|XP_002604106.1| hypothetical protein BRAFLDRAFT_71605 [Branchiostoma floridae]
gi|229289431|gb|EEN60117.1| hypothetical protein BRAFLDRAFT_71605 [Branchiostoma floridae]
Length = 929
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RT + C CDY + N +R H+ HTGEKPY CG+C FR+A L H++
Sbjct: 640 RTHTGEKPYKCDLCDYSAANKSSLRYHVAKHTGEKPYICGECGFRTAKKYNLTKHMR 696
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + ++SH+ THT EKPY CG+C +R+A + L H++
Sbjct: 527 MRTHTGEKPYKCDQCDYSAATKSTLQSHLATHTREKPYKCGECGYRTAFKSTLTRHMR 584
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
FVC C Y + + + H+RTHTGEK Y C QC + SA+ + L HL K
Sbjct: 158 FVCGKCGYRTTQMSNLSRHMRTHTGEKQYKCDQCDYSSANKSTLDRHLAK 207
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 121 LSTNLNELIEHCRTC--KSMIRTDPFRH--------KFVCYACDYFSYNIGCMRSHIRTH 170
LS N +E C C +++ R D ++H + C CDY + + H+ H
Sbjct: 37 LSRNNDERPYMCGECGYRAVKRADLYKHMRKHSGEKPYKCDQCDYSAAQKSTLDQHLTKH 96
Query: 171 TGEKPYACGQCAFRSASVAGLHYHLK 196
TG KPY CG+C + +A + L H+K
Sbjct: 97 TGAKPYICGECGYMTAKSSHLTQHMK 122
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ THTG+KPY CG C +R+ + L H +
Sbjct: 583 MRTHTGEKPYKCDQCDYAAPTKTSFKKHVATHTGDKPYKCGDCGYRTVTKFDLTKHRR 640
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGEKPY C QC + +A+ + L HL
Sbjct: 508 YMCKECGYKTTQQYYLSRHMRTHTGEKPYKCDQCDYSAATKSTLQSHL 555
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C + + + H+RTHTGEKPY C QC + +A+ + L +HL
Sbjct: 676 YICGECGFRTAKKYNLTKHMRTHTGEKPYKCDQCDYSAANKSRLDHHL 723
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
F+C C + S + H+RTHTGEKPY C QC + +AS L H
Sbjct: 789 FLCGECGFRSTQRTQLTIHMRTHTGEKPYKCDQCDYSAASRGNLSKH 835
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R H+GEKPY C QC + +A + L HL K
Sbjct: 46 YMCGECGYRAVKRADLYKHMRKHSGEKPYKCDQCDYSAAQKSTLDQHLTK 95
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + N + H+ H G+KPY CG+C R+ + L H++
Sbjct: 695 MRTHTGEKPYKCDQCDYSAANKSRLDHHLAVHRGDKPYMCGECGHRTVTKYDLQKHIR 752
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C Y + + H RTHTGEKPY C C + +A+ + L YH+ K
Sbjct: 620 YKCGDCGYRTVTKFDLTKHRRTHTGEKPYKCDLCDYSAANKSSLRYHVAK 669
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F C CDY + + H+ HTGEKP+ CG+C F++A + L H+
Sbjct: 424 FKCDQCDYSAVRKCHLDIHLAKHTGEKPFICGECGFKTAVMYNLSRHM 471
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 148 FVCYACDYFSYNIGCMRSH-IRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + +++H + HTGEKP+ CG+C FRS L H++
Sbjct: 760 YKCDQCDYSATESNHLKTHKLAKHTGEKPFLCGECGFRSTQRTQLTIHMR 809
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
F C CDY + + HI H GE+PY C +C FR+
Sbjct: 312 FKCDRCDYSAARKSQLDYHIAKHNGEEPYRCKRCGFRT 349
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
VC Y + + H+R HTGEKP+ C +C + +A + L YH+ K
Sbjct: 284 LVCGEWGYKAPYKSALAMHMRIHTGEKPFKCDRCDYSAARKSQLDYHIAK 333
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H +THTGEKP+ C QC + + L HL K
Sbjct: 396 YMCEECGYRTVHKSYLTVHKKTHTGEKPFKCDQCDYSAVRKCHLDIHLAK 445
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 20/32 (62%)
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
H+R HTGEKPY C QC F +A + L H K
Sbjct: 358 HMRIHTGEKPYKCDQCDFAAARKSALVEHQAK 389
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
++C C + + ++ HIR HTGEKPY C QC +
Sbjct: 732 YMCGECGHRTVTKYDLQKHIRIHTGEKPYKCDQCDY 767
>gi|260810252|ref|XP_002599917.1| hypothetical protein BRAFLDRAFT_157282 [Branchiostoma floridae]
gi|229285201|gb|EEN55929.1| hypothetical protein BRAFLDRAFT_157282 [Branchiostoma floridae]
Length = 352
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F+C C Y +Y+ + H+RTHTGEKPY C C+F++A GL H+K
Sbjct: 232 FMCGECGYRAYHKYRLVEHMRTHTGEKPYKCNLCSFKAAFKGGLRKHMK 280
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F+C C Y + + + H+RTHTGEKP+ C QC F+++ + L H+K
Sbjct: 31 FMCGECGYRASDKHRLAGHMRTHTGEKPFKCNQCNFKTSLKSALTRHMK 79
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGE---KPYACGQCAFRSASVAGLHYHLKK 197
+ C CD+ +Y + M+ H++ HTG+ KP+ C +C +R+ L H K+
Sbjct: 293 YSCAICDHRTYRMSDMKRHMKAHTGDTEVKPFECEECDYRTTHKKLLTRHRKR 345
>gi|260783431|ref|XP_002586778.1| hypothetical protein BRAFLDRAFT_102936 [Branchiostoma floridae]
gi|229271904|gb|EEN42789.1| hypothetical protein BRAFLDRAFT_102936 [Branchiostoma floridae]
Length = 830
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY S + H+R HTGEKPY CG+C +R+A + L H++
Sbjct: 769 MRTHTGDKPYKCDQCDYVSSRKSNLDQHVRKHTGEKPYKCGECGYRTAHKSHLSKHMR 826
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 17/111 (15%)
Query: 95 CKTCSYMIRPNAN--------NTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFR 145
C C Y +N + P+ C C +T + L+ H +RT
Sbjct: 150 CDQCDYSAAEKSNLVRHVTKHTSEKPYMCGEC-GYRTTQKHTLLRH-------MRTHTGE 201
Query: 146 HKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTG+KPY CG+C +R+A A L H+K
Sbjct: 202 KPYKCDQCDYSAAEKSTLDDHMTKHTGQKPYMCGECGYRTALRANLSRHMK 252
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 17/111 (15%)
Query: 95 CKTCSYMIRPNAN--------NTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFR 145
C C Y +N + P+ C C +T + L+ H +RT
Sbjct: 584 CDQCDYSAAEKSNLVRHVTKHTSEKPYMCGEC-GYRTTQKHTLLRH-------MRTHTGE 635
Query: 146 HKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTG+KPY CG+C +R+A A L H+K
Sbjct: 636 KPYKCDQCDYSAAEKSTLDDHMTKHTGQKPYMCGECGYRTALRANLSRHMK 686
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CDY + ++ H+ HTG+KPY CG+C +R+A + L H++
Sbjct: 19 LRTHTGEKPFKCDQCDYSAAQKCDLQKHVTKHTGDKPYMCGECGYRAARKSHLSQHMR 76
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY CG+C +R+A + L H++
Sbjct: 335 MRTHTGEKPYKCDQCDYSAAEKCALVRHVTKHTGEKPYMCGECGYRTAYKSDLSKHMR 392
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKPY CG+C +R+A + L H++
Sbjct: 722 YKCDHCDYSTTQKSSLDIHLSKHTGEKPYMCGECGYRTARKSDLSIHMR 770
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KPY CG+C +R+ L H++
Sbjct: 75 MRTHTDEKPYKCDQCDYSAAQKSTLDKHVAKHTGDKPYMCGECGYRTTRKDSLSQHMR 132
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A + L H+ K
Sbjct: 176 YMCGECGYRTTQKHTLLRHMRTHTGEKPYKCDQCDYSAAEKSTLDDHMTK 225
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A + L H+ K
Sbjct: 610 YMCGECGYRTTQKHTLLRHMRTHTGEKPYKCDQCDYSAAEKSTLDDHMTK 659
Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H RTHT EKPY CG+C +R+ L H+K
Sbjct: 484 YMCEECGYRAARRSHLSRHKRTHTEEKPYMCGECGYRTDRKCNLSRHMK 532
Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTG KPY C QC + +A + L HL K
Sbjct: 372 YMCGECGYRTAYKSDLSKHMRTHTGAKPYKCDQCDYSAAQKSSLDQHLAK 421
Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ H+G+KPY CG+C +R+ + L H++
Sbjct: 391 MRTHTGAKPYKCDQCDYSAAQKSSLDQHLAKHSGDKPYMCGECGYRTTYKSDLSKHMR 448
Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 151 YACDYFSYNIGC---MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
Y CD Y C + H+RTHTGEKPY C QC + +A L H+ K
Sbjct: 316 YMCDKCGYRAACKSNLSRHMRTHTGEKPYKCDQCDYSAAEKCALVRHVTK 365
Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTG+KPY C QC + S+ + L H++K
Sbjct: 750 YMCGECGYRTARKSDLSIHMRTHTGDKPYKCDQCDYVSSRKSNLDQHVRK 799
Score = 42.4 bits (98), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C Y + + + H+RTHTGEKP+ C QC + +A L H+ K
Sbjct: 1 MCGECGYRAAHKSGLSRHLRTHTGEKPFKCDQCDYSAAQKCDLQKHVTK 49
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHT EKPY C QC + +A + L H+ K
Sbjct: 56 YMCGECGYRAARKSHLSQHMRTHTDEKPYKCDQCDYSAAQKSTLDKHVAK 105
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ H+GEKPY C +C +R+A + L H++
Sbjct: 288 YKCDHCDYSTTQKSSLDIHLAKHSGEKPYMCDKCGYRAACKSNLSRHMR 336
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY C +C +R+A + L H +
Sbjct: 447 MRTHTGEKPYKCDHCDYSAAQKFNVDQHLTKHTGEKPYMCEECGYRAARRSHLSRHKR 504
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C C + +A + HL K
Sbjct: 428 YMCGECGYRTTYKSDLSKHMRTHTGEKPYKCDHCDYSAAQKFNVDQHLTK 477
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HT EKPY CG+C +R+ L H++
Sbjct: 573 MRTHTVEKPYKCDQCDYSAAEKSNLVRHVTKHTSEKPYMCGECGYRTTQKHTLLRHMR 630
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHT EKPY C QC + +A + L H+ K
Sbjct: 554 YMCGECGYRAAYKSDLSRHMRTHTVEKPYKCDQCDYSAAEKSNLVRHVTK 603
Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
H+ HT EKPY CG+C +R+A + L H++
Sbjct: 544 HLTKHTSEKPYMCGECGYRAAYKSDLSRHMR 574
Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H++THTG K Y C QC + +A + L +H+K+
Sbjct: 232 YMCGECGYRTALRANLSRHMKTHTGGKLYKCDQCNYSAARKSDLSFHVKR 281
Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H++THTG K Y C QC + +A + L +H+K+
Sbjct: 666 YMCGECGYRTALRANLSRHMKTHTGGKLYKCDQCNYSAARKSDLSFHVKR 715
>gi|72028083|ref|XP_797592.1| PREDICTED: uncharacterized protein LOC593001 [Strongylocentrotus
purpuratus]
Length = 939
Score = 52.8 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 48/111 (43%), Gaps = 16/111 (14%)
Query: 95 CKTCSYMIRP-----NANNTFS---PF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFR 145
C C + R N NT S P+ C C T+ EL H + + T
Sbjct: 474 CHLCGRIFRTSTLLRNHENTHSGTKPYKCELCPKAFGTS-GELGRHMK----YMHTHEKP 528
Query: 146 HKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
HK C CDY S ++ H+R+HTGEKPY C C + S L H++
Sbjct: 529 HK--CPLCDYLSVEASKIKRHMRSHTGEKPYKCTLCEYASTDNYKLKRHMR 577
Score = 44.3 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 11/83 (13%)
Query: 112 PFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHT 171
P C Y LS +++ H R S P++ C C+Y S + ++ H+R HT
Sbjct: 532 PLCDY----LSVEASKIKRHMR---SHTGEKPYK----CTLCEYASTDNYKLKRHMRVHT 580
Query: 172 GEKPYACGQCAFRSASVAGLHYH 194
GE+P+ C QC + + L H
Sbjct: 581 GERPFNCSQCDQSFSQKSSLKEH 603
>gi|260832616|ref|XP_002611253.1| hypothetical protein BRAFLDRAFT_71208 [Branchiostoma floridae]
gi|229296624|gb|EEN67263.1| hypothetical protein BRAFLDRAFT_71208 [Branchiostoma floridae]
Length = 296
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C CDY + G + H+ HTGEKPY CG C +++A + L HL+K
Sbjct: 160 FKCDQCDYSTARKGNLDRHMAKHTGEKPYNCGDCGYKTADRSSLAVHLRK 209
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF--RSASVAGLH 192
+F C CDY + C+ H R HTGEKPY CGQC + R S LH
Sbjct: 74 RFECTECDYRAAKKYCLVIHTRIHTGEKPYKCGQCDYCARQKSSLDLH 121
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + H+ THT EKPY CG+C +R+A+ + L+ H+ +
Sbjct: 216 YKCDQCDYSAAKKDNLDRHMATHTVEKPYMCGECGYRTANRSHLYRHVSR 265
Score = 42.7 bits (99), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C C Y + + + H+R HTGEKPY C QC + +A L H+
Sbjct: 188 YNCGDCGYKTADRSSLAVHLRKHTGEKPYKCDQCDYSAAKKDNLDRHM 235
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C+Y + + + H+R HTG+KP+ C QC + +A L H+ K
Sbjct: 132 LMCDECEYRTADRSNLSVHMRLHTGDKPFKCDQCDYSTARKGNLDRHMAK 181
>gi|417405413|gb|JAA49418.1| Putative re1-silencing transcription factor [Desmodus rotundus]
Length = 957
Score = 52.8 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C + +R
Sbjct: 217 CDRCGY-----NTNRYDHYTAHLKHHTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 271
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 272 RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 323
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEH 131
KH H++ + + C C+Y R + N F C S N ++H
Sbjct: 235 KH-HTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFPRKVYTCGKCNYFSDRKNNYVQH 293
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 294 -------VRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 346
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 347 TRHARQVHN 355
Score = 40.4 bits (93), Expect = 0.40, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 307 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR--- 351
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 352 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 408
Query: 197 KTY 199
+
Sbjct: 409 SKH 411
>gi|301616291|ref|XP_002937593.1| PREDICTED: RE1-silencing transcription factor A [Xenopus (Silurana)
tropicalis]
Length = 1391
Score = 52.8 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 43/113 (38%), Gaps = 15/113 (13%)
Query: 94 HCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDP 143
C C Y N F + + K NE + C C K +R
Sbjct: 212 QCDRCGY-----NTNRFDHYLAHLKHHNKAGENERVYKCTICTYTTVSEYHWKKHLRNHY 266
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C YFS HIRTHTGE+PY C C + S+ L H++
Sbjct: 267 PRILYTCSQCSYFSDRKNNYIQHIRTHTGERPYQCIICPYSSSQKTHLTRHMR 319
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCK--AVLSTNLNELIEH 131
KH H++ + + C C+Y + + N + C + S N I+H
Sbjct: 231 KH-HNKAGENERVYKCTICTYTTVSEYHWKKHLRNHYPRILYTCSQCSYFSDRKNNYIQH 289
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
IRT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 290 -------IRTHTGERPYQCIICPYSSSQKTHLTRHMRTHSGEKPFKCEQCSYVASNQHEV 342
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 343 TRHARQVHN 351
Score = 39.3 bits (90), Expect = 0.80, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
+C + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 303 ICPYSSSQKTHLT--RHMRT---------HSGEKPFKCEQCSYV-ASNQHEVTRHAR--- 347
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH+K
Sbjct: 348 -QVHNGP--KPLTCPHCDYKTADRSNFKKHVELHVNPRQFLCPVCDYAASKKCNLQYHIK 404
Query: 197 KTY 199
+
Sbjct: 405 SRH 407
>gi|260823018|ref|XP_002603980.1| hypothetical protein BRAFLDRAFT_71732 [Branchiostoma floridae]
gi|229289305|gb|EEN59991.1| hypothetical protein BRAFLDRAFT_71732 [Branchiostoma floridae]
Length = 507
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT ++ C CDY + G + H+ THTGEKP+ CG+C R+A + L H++
Sbjct: 412 MRTHTGERRYKCDQCDYSAVQKGDLDKHLATHTGEKPFMCGECGHRTARKSNLSRHMR 469
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C HC LDH ++ + + N + C C + N+L H
Sbjct: 114 CDHCDYSAVQKSSLDH-----HLAKHSGNKPY--MCGEC-GYSTARKNDLSVH------- 158
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IR + C CDY + + H+ THTGEKPY CG+C FR+A + L H++
Sbjct: 159 IRIHTGDKPYKCDQCDYSAAVKSTLDQHLTTHTGEKPYMCGECGFRAAQKSNLSRHMR 216
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F+C C Y + + + H++ H+GEKPY CG+C +R+A L H++
Sbjct: 252 FMCGECGYRTADRSTLSRHMKIHSGEKPYMCGECGYRAAYKYNLSKHMR 300
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + + C C+Y + + H+ HTGEKPY CG+C R+ + + L H++
Sbjct: 299 MRTHTGQKPYKCDQCNYSAAQKSTLDQHLMKHTGEKPYMCGECGHRTTTKSDLSRHMR 356
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 6/53 (11%)
Query: 148 FVCYACDY---FSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + YN+ H+RTHTG+KPY C QC + +A + L HL K
Sbjct: 280 YMCGECGYRAAYKYNLS---KHMRTHTGQKPYKCDQCNYSAAQKSTLDQHLMK 329
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C Y + + + H+RTHTGE+ Y C QC + + L HL
Sbjct: 393 FMCGECGYRTADRSTLSRHMRTHTGERRYKCDQCDYSAVQKGDLDKHL 440
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
G M H+ HTGEKPY CG+C +R++ + L H+
Sbjct: 69 GNMGRHVVKHTGEKPYMCGECGYRTSQRSKLSRHM 103
Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+ THTGEKPY C C + + + L +HL K
Sbjct: 84 YMCGECGYRTSQRSKLSRHMITHTGEKPYKCDHCDYSAVQKSSLDHHLAK 133
Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C + + + H+RTH+GEKP+ C QC + +A L H+
Sbjct: 449 FMCGECGHRTARKSNLSRHMRTHSGEKPFKCNQCDYSAAQKCTLDRHI 496
Score = 39.7 bits (91), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ H+G KPY CG+C + +A L H++
Sbjct: 112 YKCDHCDYSAVQKSSLDHHLAKHSGNKPYMCGECGYSTARKNDLSVHIR 160
Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 18/101 (17%)
Query: 114 CIYCKAVLSTNLNELIEH-------CRTC--KSMIRTDPFRH--------KFVCYACDYF 156
C Y A ST L++H C C ++ ++D RH + C CDY
Sbjct: 313 CNYSAAQKSTLDQHLMKHTGEKPYMCGECGHRTTTKSDLSRHMRIHTGEKPYKCDQCDYS 372
Query: 157 SYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
+ +HI HT EKP+ CG+C +R+A + L H++
Sbjct: 373 AAQKVNFDAHIAAKHTSEKPFMCGECGYRTADRSTLSRHMR 413
>gi|260814494|ref|XP_002601950.1| hypothetical protein BRAFLDRAFT_86434 [Branchiostoma floridae]
gi|229287253|gb|EEN57962.1| hypothetical protein BRAFLDRAFT_86434 [Branchiostoma floridae]
Length = 514
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 60/133 (45%), Gaps = 20/133 (15%)
Query: 78 LCKHCHSQLSHLD--LLDHCKTCSYMIRPNANNTFSPFCIYCKAVLS----TNLNELIEH 131
LC C ++ +HLD + H YM R T KA LS T+ E
Sbjct: 270 LCDFCTARKAHLDRHMYKHTGKKPYMCRECGFKTAD------KATLSSHIKTHTGEKPYK 323
Query: 132 CRTCKSMIRTDPFRH--------KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
C C I+++ +H + C CDY + + + +H+ HTGEKPY CG+C F
Sbjct: 324 CDLCDFDIKSNLTKHIKIHTGEKPYKCEQCDYRTASKSTLDTHMAKHTGEKPYVCGECGF 383
Query: 184 RSASVAGLHYHLK 196
R+ + L H+K
Sbjct: 384 RTGYKSHLASHMK 396
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
+ C CDY + N + H++ HTGEKPY C QC FR+A
Sbjct: 42 YTCGECDYKTANKYHLSRHVKIHTGEKPYKCEQCDFRTA 80
Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
I T+ HK C CDY S + H++THTGEKPYAC C F +A L H+ K
Sbjct: 119 IHTEGRPHK--CGKCDYRSAKRSHLNQHMKTHTGEKPYACDLCDFCTAWKQNLDIHMAK 175
Score = 43.1 bits (100), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 55/120 (45%), Gaps = 18/120 (15%)
Query: 77 SLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCK 136
LC C + +LD+ +M + + + C+ C + + + L +H +T
Sbjct: 157 DLCDFCTAWKQNLDI--------HMAKHRGDKPY--ICVEC-GYDTADKSNLAQHKKT-- 203
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P++ C C+Y + + +H+ HTGEKPY CG+C +++ + + L H K
Sbjct: 204 -HTENKPYK----CDLCEYSAGRKADLDTHMVKHTGEKPYVCGECGYKAGTKSHLSRHAK 258
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
C CDY S + +H+ HTG KPY C QC +R+A + L H+K
Sbjct: 406 CDYCDYSSVRKRDLDAHMAKHTGVKPYLCWQCGYRTADRSSLRKHVK 452
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CD+ + + H HTGEKPY CG+C +R+A + H+K
Sbjct: 70 YKCEQCDFRTAWKNYLDVHQSKHTGEKPYMCGECGYRTADRSYYSQHMK 118
Score = 40.0 bits (92), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CD+ + + H+ HTG+KPY C +C F++A A L H+K
Sbjct: 266 YKCPLCDFCTARKAHLDRHMYKHTGKKPYMCRECGFKTADKATLSSHIK 314
Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
I T H+ C CDY + G + H+ HTG KPY CG+C + + + + L H+K
Sbjct: 453 IHTGELHHR--CQLCDYSTARKGDLDRHMVQHTGVKPYMCGKCEYTTDNQSNLTKHIK 508
Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H++ HT +P+ CG+C +RSA + L+ H+K
Sbjct: 98 YMCGECGYRTADRSYYSQHMKIHTEGRPHKCGKCDYRSAKRSHLNQHMK 146
Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+VC C Y + + H + H+GEKPY C C F +A A L H+ K
Sbjct: 238 YVCGECGYKAGTKSHLSRHAKVHSGEKPYKCPLCDFCTARKAHLDRHMYK 287
>gi|47217786|emb|CAG06008.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1098
Score = 52.8 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K+VC C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 11 KYVCTYCSRACAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHTH 64
>gi|119361501|sp|Q2EI21.1|RESTA_XENLA RecName: Full=RE1-silencing transcription factor A; AltName:
Full=Neural-restrictive silencer factor A
gi|87204323|gb|ABD32117.1| RE-1 silencer of transcription [Xenopus laevis]
Length = 1501
Score = 52.8 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 43/113 (38%), Gaps = 15/113 (13%)
Query: 94 HCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDP 143
C C Y N F + + K NE + C C K +R
Sbjct: 215 QCDGCGY-----NTNRFDHYLAHLKHHNKAGENERVYKCTICTYSTVSEYHWKKHLRNHY 269
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C YFS HIRTHTGE+PY C C + S+ L H++
Sbjct: 270 PRILYTCSQCSYFSDRKNNYIQHIRTHTGERPYQCIICLYSSSQKTHLTRHMR 322
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCK--AVLSTNLNELIEH 131
KH H++ + + C C+Y + + N + C + S N I+H
Sbjct: 234 KH-HNKAGENERVYKCTICTYSTVSEYHWKKHLRNHYPRILYTCSQCSYFSDRKNNYIQH 292
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
IRT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 293 -------IRTHTGERPYQCIICLYSSSQKTHLTRHMRTHSGEKPFKCEQCSYVASNQHEV 345
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 346 TRHARQVHN 354
Score = 39.3 bits (90), Expect = 0.87, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
+C + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 306 ICLYSSSQKTHLT--RHMRT---------HSGEKPFKCEQCSYV-ASNQHEVTRHAR--- 350
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH+K
Sbjct: 351 -QVHNGP--KPLTCPHCDYKTADRSNFKKHVELHVNPRQFLCPVCDYAASKKCNLQYHIK 407
Query: 197 KTY 199
+
Sbjct: 408 SRH 410
>gi|260794579|ref|XP_002592286.1| hypothetical protein BRAFLDRAFT_119633 [Branchiostoma floridae]
gi|229277502|gb|EEN48297.1| hypothetical protein BRAFLDRAFT_119633 [Branchiostoma floridae]
Length = 1068
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 108 NTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHI 167
F+P C C ST+ ++L H +RT + C C +G ++ H+
Sbjct: 383 GAFAPRCKECGKQFSTS-SKLKRH-------VRTHTGEKPYKCEECSKQFSELGSLKKHM 434
Query: 168 RTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RTHTGEKPY C +C+ + + + L H++
Sbjct: 435 RTHTGEKPYRCEECSRQFSELGSLEKHMR 463
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IRT + C C +G +++H+RTHTGEKPY+C +C+ + + L H+
Sbjct: 292 KRHIRTHTGEKPYKCEECSRQFSELGSLKTHMRTHTGEKPYSCEKCSKQFTQLGNLKTHM 351
Query: 196 K 196
+
Sbjct: 352 R 352
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C +G +++H+RTHTGEKPY C +C+ + + + L+ H+
Sbjct: 602 KKHMRTHTGEKPYKCEECSKQFSQLGNLKNHMRTHTGEKPYKCEECSRQFSELGSLNRHM 661
Query: 196 K 196
+
Sbjct: 662 R 662
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C +G +++H+R HTGEKPY C QC+ + + + L H+
Sbjct: 960 KKHMRTHTGEKPYKCEECSRQFSQLGNLKTHMRNHTGEKPYRCDQCSRQFSELGSLKKHM 1019
Query: 196 K 196
+
Sbjct: 1020 R 1020
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 58/135 (42%), Gaps = 16/135 (11%)
Query: 62 NLSVLLVTTIPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVL 121
NL + L T + + C+ C Q S L L S+M + + C C
Sbjct: 38 NLKIHLRTHTGEKPY-RCEECSKQFSQLSSLK-----SHMRTHSGEKPYK--CEECSRRF 89
Query: 122 STNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
ST+ + K IRT + C C+ +G ++ H+RTHTGEKPY C C
Sbjct: 90 STSS--------SLKRHIRTHTGEKPYTCEQCNRQFVELGDLKKHMRTHTGEKPYKCEVC 141
Query: 182 AFRSASVAGLHYHLK 196
+ + ++ L H++
Sbjct: 142 STHFSELSKLKRHMR 156
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 14/125 (11%)
Query: 84 SQLSHLD--LLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------ 135
SQLSHL +L H + Y + FS + K + T+ E C C
Sbjct: 568 SQLSHLRTHMLTHTEEKPYRC-EECSKQFSQL-SHLKKHMRTHTGEKPYKCEECSKQFSQ 625
Query: 136 ----KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
K+ +RT + C C +G + H+RTHTGEKPY C +C+ + + + L
Sbjct: 626 LGNLKNHMRTHTGEKPYKCEECSRQFSELGSLNRHMRTHTGEKPYKCEECSRQFSVLGNL 685
Query: 192 HYHLK 196
H++
Sbjct: 686 KKHMR 690
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +R + C C +G ++ H+RTHTGEKPY C +C+ + + + L HL
Sbjct: 988 KTHMRNHTGEKPYRCDQCSRQFSELGSLKKHMRTHTGEKPYKCEECSRQFSQLGNLKTHL 1047
Query: 196 K 196
+
Sbjct: 1048 R 1048
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 37/61 (60%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +R+ + + C C +G +++H+++HTGEKPY C +C+ + + + GL H+
Sbjct: 820 KTHMRSHTGENPYGCEVCSRQFRQLGHLKTHMQSHTGEKPYKCEECSRQFSRLGGLKRHM 879
Query: 196 K 196
+
Sbjct: 880 Q 880
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +R + C C +G ++ H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 932 KTHMRNHTGEKPYRCDQCSRQFSELGSLKKHMRTHTGEKPYKCEECSRQFSQLGNLKTHM 991
Query: 196 K 196
+
Sbjct: 992 R 992
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C +G +++H+R HTGEKPY C QC+ + + + L H++
Sbjct: 916 YRCEECSRQFSELGNLKTHMRNHTGEKPYRCDQCSRQFSELGSLKKHMR 964
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C +G + H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 686 KKHMRTHTGEKPYKCEECCRQFSQLGSLEKHMRTHTGEKPYRCEECSRQFSELGNLKRHM 745
Query: 196 K 196
+
Sbjct: 746 Q 746
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C +G ++ H++THTGEKPY C +C+ + + L+ H++
Sbjct: 860 YKCEECSRQFSRLGGLKRHMQTHTGEKPYRCDECSKQFTTSGDLNRHMR 908
Score = 40.0 bits (92), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C C ST ++L EH +RT + C C + +++H+RTHTGE
Sbjct: 166 CQECSKQFSTR-SKLKEH-------MRTHTGEKPYKCEECSKQFSKLNHLKTHMRTHTGE 217
Query: 174 KPYACGQCA 182
KPY C +C+
Sbjct: 218 KPYRCEECS 226
Score = 36.2 bits (82), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAC 178
+RT + C C +G +++H+RTHTGEKPY C
Sbjct: 462 MRTHTGEKPYKCEECCKQFSQLGHLKTHMRTHTGEKPYKC 501
>gi|260823022|ref|XP_002603982.1| hypothetical protein BRAFLDRAFT_71730 [Branchiostoma floridae]
gi|229289307|gb|EEN59993.1| hypothetical protein BRAFLDRAFT_71730 [Branchiostoma floridae]
Length = 703
Score = 52.4 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+R + C CDY + ++ H+ HTGEKPY CG+C +R+A + L H++K
Sbjct: 530 VRIHTGEKPYKCDRCDYSAATKTALKQHVAIHTGEKPYLCGECGYRTAQKSHLSKHMRK 588
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + G + H+ H+GEKPY CG+C +R+A L HL+
Sbjct: 418 MRTHTGEKPYKCDRCDYSAAQKGHLNQHLMKHSGEKPYMCGKCGYRTAQKQHLSQHLR 475
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + G + H+ H+G+KPY CG+C +R+A L HL+
Sbjct: 595 YKCDQCDYAAAQKGTLDQHLMKHSGDKPYMCGECGYRTAQRTNLSQHLR 643
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C C+Y + + H+ HTGEKPY CG+C +R+ + L H++
Sbjct: 362 MRTHTGEKPFKCDQCNYSASRKSHLEQHVAKHTGEKPYMCGECGYRATEKSDLSVHMR 419
Score = 49.7 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY CG C +R+A + L H++
Sbjct: 474 LRTHTGEKPYKCDKCDYSAAQKSTLDQHVIKHTGEKPYMCGSCGYRTAKKSHLTEHVR 531
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C +C + +A L+ HL K
Sbjct: 399 YMCGECGYRATEKSDLSVHMRTHTGEKPYKCDRCDYSAAQKGHLNQHLMK 448
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HTGEKPY C QC + +A L HL K
Sbjct: 567 YLCGECGYRTAQKSHLSKHMRKHTGEKPYKCDQCDYAAAQKGTLDQHLMK 616
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + +H+RTHTGEKPY C QC + +A L H+
Sbjct: 194 YMCGVCGYRAAQKSHLSAHMRTHTGEKPYKCYQCDYSAAQKGTLDDHV 241
Score = 45.1 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C +C + +A + L H+ K
Sbjct: 455 YMCGKCGYRTAQKQHLSQHLRTHTGEKPYKCDKCDYSAAQKSTLDQHVIK 504
Score = 44.3 bits (103), Expect = 0.030, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H H+GEKPY C +C +R+A + L H+K
Sbjct: 642 LRTHTGEKPYKCDQCDYSAAQKQHLIDHQTRHSGEKPYMCEKCGYRAAQRSTLSQHMK 699
Score = 43.5 bits (101), Expect = 0.051, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
++C C Y + + H+RTHTGEKPY C QC + +A
Sbjct: 623 YMCGECGYRTAQRTNLSQHLRTHTGEKPYKCDQCDYSAA 661
Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 164 RSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
R +RTHTGEKP+ C QC + ++ + L H+ K
Sbjct: 359 RRRMRTHTGEKPFKCDQCNYSASRKSHLEQHVAK 392
>gi|260806380|ref|XP_002598062.1| hypothetical protein BRAFLDRAFT_85723 [Branchiostoma floridae]
gi|229283333|gb|EEN54074.1| hypothetical protein BRAFLDRAFT_85723 [Branchiostoma floridae]
Length = 534
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F+C C Y + + + H+RTHTGEKPY CG+C FR+ + L H++
Sbjct: 55 FMCGECGYRAADRSNLSRHMRTHTGEKPYKCGECGFRAVQWSKLSRHMR 103
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H R HTGEKP+ CG+C +R+A A L H++
Sbjct: 469 LRTHTGEKPYKCDQCDYSAAQKQNLDQHRRKHTGEKPFMCGECGYRAAQKADLSKHMR 526
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + +H THTG+KPY CG+C +R+A + L H++
Sbjct: 159 MRTHTGEKPYKCDQCDYSAAQRINLVTHQATHTGDKPYMCGECGYRAAQRSALSLHMR 216
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A L H +K
Sbjct: 450 YMCGECGYRTVEKSTLSVHLRTHTGEKPYKCDQCDYSAAQKQNLDQHRRK 499
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + HI+THTGEKP+ CG+C + +A L HL K
Sbjct: 365 YICEECGYRTAKKSHLSRHIKTHTGEKPFKCGECDYSAADKYTLDKHLAK 414
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
I+T F C CDY + + + H+ HTGEKPY C QC F + + ++YH+
Sbjct: 384 IKTHTGEKPFKCGECDYSAADKYTLDKHLAKHTGEKPYKCDQCDFSAIQKSHINYHI 440
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + C CDY + G + H+ H+GEKPY CG+C +R+A + H+
Sbjct: 215 MRTHTGEKPYKCDHCDYSAAQKGTLDKHVAAAHSGEKPYICGECGYRTARKSDFSQHM 272
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
C CD+ + + + H+ THT +KPY CG+C FR+ S+ L H++
Sbjct: 283 CDLCDFSTVSKSNLNHHLATHTRDKPYMCGECGFRTGSIHDLSQHMR 329
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
++C C Y + + H+RTHTGEKPY C QC + +A
Sbjct: 140 YMCGECGYRTVEKSTLSVHMRTHTGEKPYKCDQCDYSAA 178
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGEKPY C C + +A L H+
Sbjct: 196 YMCGECGYRAAQRSALSLHMRTHTGEKPYKCDHCDYSAAQKGTLDKHV 243
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
+RT + C C + + + H+RTHTGEKPY C QC +
Sbjct: 74 MRTHTGEKPYKCGECGFRAVQWSKLSRHMRTHTGEKPYKCDQCDY 118
Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 148 FVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CD+ + + HI T H GEKPY CG+C +R+ + L HL+
Sbjct: 421 YKCDQCDFSAIQKSHINYHIATKHGGEKPYMCGECGYRTVEKSTLSVHLR 470
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + +HI T H G KPY CG+C +R+ + L H++
Sbjct: 102 MRTHTGEKPYKCDQCDYSAIRKYRLDNHIATKHGGYKPYMCGECGYRTVEKSTLSVHMR 160
>gi|431893875|gb|ELK03692.1| RE1-silencing transcription factor [Pteropus alecto]
Length = 967
Score = 52.4 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C + +R
Sbjct: 217 CDRCGY-----NTNRYDHYTAHLKHHTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 271
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 272 RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 323
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEH 131
KH H++ + + C C+Y R + N F C S N ++H
Sbjct: 235 KH-HTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFPRKVYTCGKCNYFSDRKNNYVQH 293
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 294 -------VRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 346
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 347 TRHARQVHN 355
Score = 40.0 bits (92), Expect = 0.47, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 307 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR--- 351
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 352 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 408
Query: 197 KTY 199
+
Sbjct: 409 SKH 411
>gi|260832574|ref|XP_002611232.1| hypothetical protein BRAFLDRAFT_119656 [Branchiostoma floridae]
gi|229296603|gb|EEN67242.1| hypothetical protein BRAFLDRAFT_119656 [Branchiostoma floridae]
Length = 498
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 126 NELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
++L EH RT M P++ C CDY + G + H+ HTGEKPY CG+C FR+
Sbjct: 402 SQLSEHMRTHTGMK---PYK----CDKCDYSASCKGNLVKHMHKHTGEKPYMCGECGFRT 454
Query: 186 ASVAGLHYHLKK 197
A + L HL++
Sbjct: 455 ADRSSLTVHLRR 466
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDYF+ + H+ HTGEKP+ CG+C +R+A + L H++
Sbjct: 38 YKCDQCDYFAAQKCHLDQHMAKHTGEKPFMCGECGYRTADRSHLTVHMR 86
Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H++ HTGEKPY C QC F +A L HL K
Sbjct: 333 YMCEECGYRTADRSYLTIHVKKHTGEKPYKCDQCDFSAAHKVSLDLHLTK 382
Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+F C C Y + + H R HTGEKPY C QC + +A L H+ K
Sbjct: 164 RFECTECGYRAAKKSVLIKHTRKHTGEKPYKCDQCDYSAAQKVHLDRHMTK 214
Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C CDY + + H+ HTG KPY C +C +R+A + L H+KK
Sbjct: 296 MRTHTGEKPYRCDQCDYSTTRKSILNRHMAKHTGNKPYMCEECGYRTADRSYLTIHVKK 354
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C + + N + H+RTHTGEKPY C QC + + + L+ H+ K
Sbjct: 277 LMCGECGFRTANRSNLSRHMRTHTGEKPYRCDQCDYSTTRKSILNRHMAK 326
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+R HTGEKPY C QC + +A L H+ K
Sbjct: 10 YMCGECGYRTADRSYLTVHMRKHTGEKPYKCDQCDYFAAQKCHLDQHMAK 59
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CD+ + + + H+ H+GEKP+ CGQC +R+A + L H++
Sbjct: 361 YKCDQCDFSAAHKVSLDLHLTKHSGEKPFMCGQCEYRTALRSQLSEHMR 409
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C+Y + + H+RTHTG KPY C +C + ++ L H+ K
Sbjct: 389 FMCGQCEYRTALRSQLSEHMRTHTGMKPYKCDKCDYSASCKGNLVKHMHK 438
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 170 HTGEKPYACGQCAFRSASVAGLHYHLKK 197
HTGEKPY CG+C +R+A + L H++K
Sbjct: 4 HTGEKPYMCGECGYRTADRSYLTVHMRK 31
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 149 VCYACDYFSYNIGC-MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C Y S I C + H+R H GEKPY C QC + SA L H+ K
Sbjct: 222 ICGECGY-SAAIRCRLLEHMRIHAGEKPYKCDQCNYTSAKKYNLDQHMTK 270
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + + H+R HTG KPY C QC + +A L H+ K
Sbjct: 445 YMCGECGFRTADRSSLTVHLRRHTGVKPYKCDQCDYSAAQKCHLDQHVAK 494
Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
+ C CDY + + H+ HTGEKP CG+C + +A
Sbjct: 193 YKCDQCDYSAAQKVHLDRHMTKHTGEKPSICGECGYSAA 231
Score = 36.2 bits (82), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C+Y S + H+ HTG K CG+C FR+A+ + L H++
Sbjct: 249 YKCDQCNYTSAKKYNLDQHMTKHTGVKTLMCGECGFRTANRSNLSRHMR 297
>gi|405954203|gb|EKC21709.1| Transcriptional repressor CTCF [Crassostrea gigas]
Length = 868
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 15/87 (17%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFV----CYACDYFSYNIGCMRSHIRT 169
C C++ +T+ EL+ H R ++H F C C+Y S + ++ H+R+
Sbjct: 386 CKECESAFTTS-GELVRHIR----------YKHTFEKPHKCTECEYASVELSKLKRHMRS 434
Query: 170 HTGEKPYACGQCAFRSASVAGLHYHLK 196
HTGE+PY C C + S L HL+
Sbjct: 435 HTGERPYQCMHCNYASPDTYKLKRHLR 461
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGL 191
+CK ++T F C CDY + ++ + +H THTGEKP+ C +C FR +
Sbjct: 541 SCKMHMKTHEGERCFKCEQCDYAAMSLRHLEAHNLTHTGEKPFECDECNATFRQKQLLKR 600
Query: 192 HYHLKKTYH 200
H L YH
Sbjct: 601 HKGL---YH 606
Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 28/59 (47%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
K +R+ + C C+Y S + ++ H+R HTGEKPY C C R L H
Sbjct: 429 KRHMRSHTGERPYQCMHCNYASPDTYKLKRHLRIHTGEKPYICDICQARFTQSNSLKAH 487
>gi|260832626|ref|XP_002611258.1| hypothetical protein BRAFLDRAFT_71213 [Branchiostoma floridae]
gi|229296629|gb|EEN67268.1| hypothetical protein BRAFLDRAFT_71213 [Branchiostoma floridae]
Length = 238
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 30/51 (58%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+FVC CDY + + + H RTHTGEKPY C QC + +A L HL K
Sbjct: 73 RFVCTECDYRTASKANLVKHTRTHTGEKPYKCEQCDYSAAQKGTLGLHLTK 123
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C C ++ N L++H RT P++ C CDY + G + H+ HTGE
Sbjct: 76 CTECDYRTASKAN-LVKHTRT---HTGEKPYK----CEQCDYSAAQKGTLGLHLTKHTGE 127
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
KP+ CGQC +R+A+ + L H++
Sbjct: 128 KPFMCGQCGYRTANRSYLSVHMR 150
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + G + H HTGEKP+ CG+C +R+ + L H++K
Sbjct: 158 YKCDLCDYSAAQKGHLDDHRARHTGEKPFMCGECGYRTDRKSNLSRHMRK 207
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + H+R HTGEKPY C QC + S L HL K
Sbjct: 186 FMCGECGYRTDRKSNLSRHMRKHTGEKPYKCDQCDYSSIDKRRLKKHLDK 235
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
F+C C Y + N + H+R+HTG KPY C C + +A L H
Sbjct: 130 FMCGQCGYRTANRSYLSVHMRSHTGVKPYKCDLCDYSAAQKGHLDDH 176
>gi|260822988|ref|XP_002603965.1| hypothetical protein BRAFLDRAFT_71747 [Branchiostoma floridae]
gi|229289290|gb|EEN59976.1| hypothetical protein BRAFLDRAFT_71747 [Branchiostoma floridae]
Length = 582
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + HI HTGEKPY CG+C +RS+ +GL+ H+K+
Sbjct: 183 YKCDQCDYAAALKCTLDQHIAKHTGEKPYMCGECGYRSSFKSGLYRHMKR 232
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + N + H+RTHTGEKPY C C + +A +GL+ H K
Sbjct: 512 YMCSECGFMTANTSNLAKHMRTHTGEKPYKCDHCDYAAARKSGLNRHQAK 561
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 148 FVCYACDYF-SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
FVC C Y +YN+ R H+RTHTGEKPY C QC + +A L+ H
Sbjct: 456 FVCGECGYRTAYNMTLAR-HMRTHTGEKPYKCDQCDYSAAQKYDLNNH 502
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + +H HTGEKPY C +C F +A+ + L H++
Sbjct: 475 MRTHTGEKPYKCDQCDYSAAQKYDLNNHRANHTGEKPYMCSECGFMTANTSNLAKHMR 532
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 10/83 (12%)
Query: 106 ANNTFS-PF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCM 163
AN+T P+ C C ++ N + L +H +RT + C CDY + +
Sbjct: 504 ANHTGEKPYMCSEC-GFMTANTSNLAKH-------MRTHTGEKPYKCDHCDYAAARKSGL 555
Query: 164 RSHIRTHTGEKPYACGQCAFRSA 186
H HTG+K + C +C FR+A
Sbjct: 556 NRHQAKHTGDKRFVCNECGFRTA 578
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 150 CYACDYFSYNIGCMRSHI-RTHTGEKPYACGQCAFRSASVAGLHYHLK 196
C CDY + + + H+ HT +KPY CG+C +R+A GL H +
Sbjct: 241 CEHCDYSTADKCSLDQHVLVKHTADKPYMCGECGYRTAWKYGLTQHER 288
>gi|261289257|ref|XP_002603071.1| hypothetical protein BRAFLDRAFT_147487 [Branchiostoma floridae]
gi|229288388|gb|EEN59083.1| hypothetical protein BRAFLDRAFT_147487 [Branchiostoma floridae]
Length = 243
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 30/49 (61%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C Y + IG + HIRTHTGEKPY C QC + +A + HLKK
Sbjct: 101 ICKECGYRASTIGRLNEHIRTHTGEKPYKCDQCDYSAAQSGMVIKHLKK 149
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 55/131 (41%), Gaps = 17/131 (12%)
Query: 68 VTTIPTQNHSLCKHCHSQLSHLD-LLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLN 126
+TT T+ C+ C SH D L H K I+ C Y ++ +
Sbjct: 63 MTTHITEKPYKCEQCDYSASHKDNLRQHLK-----IKHGEKVHICKECGY----RASTIG 113
Query: 127 ELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
L EH IRT + C CDY + G + H++ HTGEKPY C +C FR+
Sbjct: 114 RLNEH-------IRTHTGEKPYKCDQCDYSAAQSGMVIKHLKKHTGEKPYICEECDFRTG 166
Query: 187 SVAGLHYHLKK 197
+ L H K
Sbjct: 167 TKWSLVRHRTK 177
Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 150 CYACDYFSYNIGCMRSHI-RTHTGEKPYACGQCAFRSASVAGLHYHL 195
C C Y + G + +HI HTGEKPY CG+C +R+A + + H+
Sbjct: 17 CDLCGYSAAQKGTLDTHIMAKHTGEKPYMCGECGYRTAVRSRMFKHM 63
>gi|260822998|ref|XP_002603970.1| hypothetical protein BRAFLDRAFT_71742 [Branchiostoma floridae]
gi|229289295|gb|EEN59981.1| hypothetical protein BRAFLDRAFT_71742 [Branchiostoma floridae]
Length = 322
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + C+ H+ HTGE+PY CG+C +R+A + L H++
Sbjct: 144 MRTHTGERPYKCDQCDYSTAHKKCLDQHLAKHTGEEPYKCGECGYRTADRSQLSRHMR 201
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + +HI+ HTGEKPY CG+C +R+ A L H++
Sbjct: 256 MRTHTGEKPYKCDQCDYSAADKSNLATHIKKHTGEKPYMCGECGYRANYKASLSRHMR 313
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A + L H+KK
Sbjct: 237 YMCGECGYRAAQRSTLSKHMRTHTGEKPYKCDQCDYSAADKSNLATHIKK 286
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
C C P++ C CDY + + + H+ H+G+KPY CG+C +R++ L
Sbjct: 85 CGECGYSTGEKPYK----CDQCDYSAAHKSNLEQHVAKHSGDKPYMCGECGYRASRKNNL 140
Query: 192 HYHLK 196
H++
Sbjct: 141 SLHMR 145
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGE+PY C QC + +A L HL K
Sbjct: 125 YMCGECGYRASRKNNLSLHMRTHTGERPYKCDQCDYSTAHKKCLDQHLAK 174
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
+ C C Y + + + H+RTHTGEKPY C QC + +A
Sbjct: 181 YKCGECGYRTADRSQLSRHMRTHTGEKPYKCDQCDYSAA 219
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H H+GEKPY CG+C +R+A + L H++
Sbjct: 200 MRTHTGEKPYKCDQCDYSAALKHHLIDHQTKHSGEKPYMCGECGYRAAQRSTLSKHMR 257
>gi|260832824|ref|XP_002611357.1| hypothetical protein BRAFLDRAFT_210867 [Branchiostoma floridae]
gi|229296728|gb|EEN67367.1| hypothetical protein BRAFLDRAFT_210867 [Branchiostoma floridae]
Length = 85
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y++ N G + H+RTHTGEKPY C C F +A + LH H
Sbjct: 4 YMCEKCGYWTANKGALSLHMRTHTGEKPYKCDLCDFSTAVTSNLHRH 50
>gi|260787879|ref|XP_002588979.1| hypothetical protein BRAFLDRAFT_89170 [Branchiostoma floridae]
gi|229274151|gb|EEN44990.1| hypothetical protein BRAFLDRAFT_89170 [Branchiostoma floridae]
Length = 1012
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Query: 110 FSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRT 169
SP + C V S + + S + T ++C C Y + + H+RT
Sbjct: 710 LSPTGVSCDRVASEGKEQPTA---STTSQLETQTSDKPYICGQCGYRAAKKSHLAEHMRT 766
Query: 170 HTGEKPYACGQCAFRSASVAGLHYHLKK 197
HTGEKPY C QC + ++ L YH K
Sbjct: 767 HTGEKPYKCDQCDYSASKKCNLDYHSAK 794
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + + H+ HTG+KPY CG+C +R+A + L H++
Sbjct: 885 YKCDQCDYSAAHKSNLDKHLSKHTGDKPYMCGECGYRTARRSDLSRHMR 933
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HTGEKPY C QC + +A + L HL K
Sbjct: 857 YMCGQCGYRAVYKSYLSQHMRIHTGEKPYKCDQCDYSAAHKSNLDKHLSK 906
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Query: 127 ELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
+L++H R S P++ C CDY + + H +HTG+KPY CGQC +R+
Sbjct: 815 DLMKHMR---SHTGEKPYK----CDQCDYSAARKSTLCQHKASHTGDKPYMCGQCGYRAV 867
Query: 187 SVAGLHYHLK 196
+ L H++
Sbjct: 868 YKSYLSQHMR 877
Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + +H HTG+KPY CG+C +R+ L H++
Sbjct: 932 MRTHTGERNYKCDQCDYSAAHKVSLVNHQAKHTGDKPYMCGECGYRATLKYTLTRHMR 989
Score = 44.7 bits (104), Expect = 0.024, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + + H+R+HTGEKPY C QC + +A + L H
Sbjct: 801 YMCGECGYRTARKPDLMKHMRSHTGEKPYKCDQCDYSAARKSTLCQH 847
Score = 44.3 bits (103), Expect = 0.032, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
++C C Y + + H+RTHTGEKPY C QC + +A
Sbjct: 969 YMCGECGYRATLKYTLTRHMRTHTGEKPYKCNQCDYSAA 1007
Score = 43.1 bits (100), Expect = 0.066, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H HTG+K Y CG+C +R+A L H++
Sbjct: 764 MRTHTGEKPYKCDQCDYSASKKCNLDYHSAKHTGDKLYMCGECGYRTARKPDLMKHMR 821
Score = 42.0 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGE+ Y C QC + +A L H K
Sbjct: 913 YMCGECGYRTARRSDLSRHMRTHTGERNYKCDQCDYSAAHKVSLVNHQAK 962
>gi|260804320|ref|XP_002597036.1| hypothetical protein BRAFLDRAFT_96185 [Branchiostoma floridae]
gi|229282298|gb|EEN53048.1| hypothetical protein BRAFLDRAFT_96185 [Branchiostoma floridae]
Length = 791
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 33/59 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
IR F C CDY S + G + HI HTGEKPY CG+C FR+ + L H++K
Sbjct: 29 IRRHTGEKPFKCDLCDYSSADKGNLDRHILKHTGEKPYMCGECGFRTTYKSELTIHMRK 87
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY CG+C +R+A+ A L H+K
Sbjct: 276 VRTHTSEKPYQCDLCDYSAAQKSYLDEHVAKHTGEKPYMCGECGYRTANKANLSRHVK 333
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++T + C CDY + + H+ HTGEKPY CG+C +R+A A L H++
Sbjct: 332 VKTHTGEKPYKCDLCDYSAAQKVALDKHVAKHTGEKPYMCGECGYRTADRANLSRHMR 389
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKPY CG+C +R+A A L H++
Sbjct: 565 YKCDLCDYSAAQKVALDKHVAKHTGEKPYMCGECGYRTADRANLSRHMR 613
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C CD+ + + H+ HTGEKPY CG+C FR+A+ + L H+K+
Sbjct: 122 FKCDQCDHSAVRRSDLDKHMLVHTGEKPYMCGECYFRTANKSNLAVHMKQ 171
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C+Y + + H HTGEKPY CG+C +R+A A L H++
Sbjct: 612 MRTHTGEKPYKCDLCNYSAAQKSDLYKHFAKHTGEKPYMCGECGYRTADRAKLSRHMR 669
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY S + H+ HTGEKPY C C +R+A L H++
Sbjct: 500 VRTHTGEKPYKCDQCDYSSTQKKYLDKHVDKHTGEKPYKCEDCGYRTAISTNLSRHMR 557
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C DY + H+ HTGEKPY CG+C +R A + L H++
Sbjct: 444 MRTHTGEKPYKCDQSDYSTARKATFDQHVEKHTGEKPYMCGECGYRRARKSHLSKHVR 501
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + C CDY + + H HT EKPY CG+C +R+A A L H+
Sbjct: 668 MRTHTGEKPYKCDLCDYSAAQKSDLYKHAAKHTNEKPYMCGECGYRTAEKATLSVHM 724
Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+VC C Y + + H+RTHTGEKPY C Q + +A A H++K
Sbjct: 425 YVCGECGYRTVKKSALSVHMRTHTGEKPYKCDQSDYSTARKATFDQHVEK 474
Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + H+RTHTGEKPY C QC + S L H+ K
Sbjct: 481 YMCGECGYRRARKSHLSKHVRTHTGEKPYKCDQCDYSSTQKKYLDKHVDK 530
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + N + H++ HTGEKP+ CG C +R+A L H+KK
Sbjct: 150 YMCGECYFRTANKSNLAVHMKQHTGEKPFICGVCGYRAAQSTKLSRHMKK 199
Score = 43.9 bits (102), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + N + H++THTGEKPY C C + +A L H+ K
Sbjct: 313 YMCGECGYRTANKANLSRHVKTHTGEKPYKCDLCDYSAAQKVALDKHVAK 362
Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+RTHTGEKPY C C + +A + L+ H K
Sbjct: 593 YMCGECGYRTADRANLSRHMRTHTGEKPYKCDLCNYSAAQKSDLYKHFAK 642
Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+RTHTGEKPY C C + +A + L+ H K
Sbjct: 649 YMCGECGYRTADRAKLSRHMRTHTGEKPYKCDLCDYSAAQKSDLYKHAAK 698
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEK Y CG+C +R+ + L H++
Sbjct: 397 YKCDLCDYSAARKFNLDKHVAKHTGEKHYVCGECGYRTVKKSALSVHMR 445
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+F+C C + + + + HIR HTGEKP+ C C + SA L H+
Sbjct: 9 RFMCGICGHRTPDKANIVRHIRRHTGEKPFKCDLCDYSSADKGNLDRHI 57
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + H HT EKPY CG+C +R+A A L H++
Sbjct: 733 YKCDLCDYILLLRINLYKHAAKHTNEKPYMCGECGYRTADKATLSVHMR 781
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
F+C C Y + + H++ HTGEKP+ C QC +
Sbjct: 178 FICGVCGYRAAQSTKLSRHMKKHTGEKPFQCDQCGY 213
Score = 36.6 bits (83), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+RTHTG +PY C C + +A L H+ K
Sbjct: 369 YMCGECGYRTADRANLSRHMRTHTGLRPYKCDLCDYSAARKFNLDKHVAK 418
Score = 36.2 bits (82), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C Y + + H+R HTGEKPY C C + +A L H+ K
Sbjct: 537 YKCEDCGYRTAISTNLSRHMRIHTGEKPYKCDLCDYSAAQKVALDKHVAK 586
>gi|260792112|ref|XP_002591071.1| hypothetical protein BRAFLDRAFT_69374 [Branchiostoma floridae]
gi|229276271|gb|EEN47082.1| hypothetical protein BRAFLDRAFT_69374 [Branchiostoma floridae]
Length = 958
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 112 PFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHT 171
P C C + + N+L H +R F C C Y + + +H+RTHT
Sbjct: 830 PDCEVC-GYSAVDKNDLDRH-------LRIHTGEKPFKCTECGYQAAQRSALTNHLRTHT 881
Query: 172 GEKPYACGQCAFRSASVAGLHYHLK 196
GE+PYAC +C +R+A + L H++
Sbjct: 882 GERPYACPECDYRAAQKSALRNHME 906
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+I T PF +C C + + + +H+R HTGEKP++C +C +++A L HLK
Sbjct: 740 LIHTKPF----ICGECGHREISRSKLEAHMRIHTGEKPFSCAECGYKTAFRGNLEKHLK 794
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RT + VC C Y + + G H++THTGE+ +AC +C +RS L H+K
Sbjct: 126 RTKTGKAILVCGECGYRTDHKGHFGRHVKTHTGERLFACEECEYRSNQKYALQRHMK 182
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
F+C C Y + + + +H+R HTGEK Y C QC +R++ + + HL H
Sbjct: 484 FICGECGYRAGHQARLDAHMRKHTGEKRYVCKQCGYRASCKSRMIRHLNTKTH 536
Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
C C Y + + M H+RTHT EKP+ C +C +R+ +GL HLK
Sbjct: 191 ITCGMCGYKTSSRSLMVKHMRTHTEEKPHVCLECGYRARYKSGLAVHLK 239
Score = 42.4 bits (98), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
F C C Y + G + H++THTG KPY C +C +R+
Sbjct: 774 FSCAECGYKTAFRGNLEKHLKTHTGGKPYTCEECGYRT 811
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKT 198
+RT VC C Y + + H++THTGEKP+ C +C R+ + L H+ +
Sbjct: 210 MRTHTEEKPHVCLECGYRARYKSGLAVHLKTHTGEKPFVCVECDHRTGTKDALKKHVSRV 269
Query: 199 Y 199
+
Sbjct: 270 H 270
Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
F+C C + + N M +H++THTGEKP A G+C +A
Sbjct: 914 FMCTECGFRAANKNTMVAHMKTHTGEKPCASGECEDTAA 952
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 23/49 (46%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C Y + M H RTHTGEKP C C + + L HL+
Sbjct: 802 YTCEECGYRTTMRSMMTRHARTHTGEKPPDCEVCGYSAVDKNDLDRHLR 850
Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + +R+H+ H G + C +C FR+A+ + H+K
Sbjct: 877 LRTHTGERPYACPECDYRAAQKSALRNHMEIHRGGILFMCTECGFRAANKNTMVAHMK 934
Score = 35.8 bits (81), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPY-ACGQCAFRSASVAGLHYHLK 196
F C C+Y S ++ H++TH EKP CG C ++++S + + H++
Sbjct: 162 FACEECEYRSNQKYALQRHMKTHACEKPSITCGMCGYKTSSRSLMVKHMR 211
>gi|410958499|ref|XP_003985855.1| PREDICTED: zinc finger protein 40 [Felis catus]
Length = 2781
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 102 IRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH--KFVCYACDYFSYN 159
+ P + +P IY A +++ +N +E + C +++ + K++C C+
Sbjct: 425 VSPAHSTPSAPTPIYNSAPVASVVNHSVE--QMCNLLLKDQKPKKQGKYICEYCNRACAK 482
Query: 160 IGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ HIR+HTGE+PY C C F + + L+ H K H
Sbjct: 483 PSVLLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAH 523
Score = 45.1 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 2141 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKTH 2196
>gi|260787891|ref|XP_002588985.1| hypothetical protein BRAFLDRAFT_89176 [Branchiostoma floridae]
gi|229274157|gb|EEN44996.1| hypothetical protein BRAFLDRAFT_89176 [Branchiostoma floridae]
Length = 1337
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 103 RPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIG 161
+P AN P+ C C + ++L +H +RT + C CDY +
Sbjct: 306 QPEANTGEKPYRCGEC-GYRTAQKSQLSDH-------MRTHTGEKPYKCDQCDYTAVQKS 357
Query: 162 CMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ H+ HTGEKPY CG+C FR+A + L H+
Sbjct: 358 TLYKHLAMHTGEKPYMCGECGFRTAYRSALSRHM 391
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 103 RPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIG 161
+P AN P+ C C + ++L +H +RT + C CDY +
Sbjct: 862 QPEANTGEKPYRCGEC-GYRTAQKSQLSDH-------MRTHTGEKPYKCDQCDYTAVQKS 913
Query: 162 CMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ H+ HTGEKPY CG+C FR+A + L H+
Sbjct: 914 TLYKHLAMHTGEKPYMCGECGFRTAYRSALSRHM 947
Score = 49.7 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
S ++++ ++C C Y + + H+RTHTGEKPY C QC + +A + L HL
Sbjct: 46 SQLKSNTGEKPYMCGECGYRTALKAHLSRHMRTHTGEKPYKCDQCDYSAAQKSSLDLHLA 105
Query: 197 K 197
K
Sbjct: 106 K 106
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C CDY + + H+ HTG+KPY CG+C +R+A L H++K
Sbjct: 587 MRTHTGEKPYKCDQCDYSATRKHHLDQHLAIHTGDKPYMCGECGYRAAQKCTLSQHMRK 645
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KPY CG+C +R+A + L H++
Sbjct: 531 MRTHTGLKPYKCNQCDYSATCKSTLSQHLAKHTGDKPYMCGECGYRTAKNSELSRHMR 588
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KPY CG+C +R+A + L H++
Sbjct: 132 MRTHTGEKPYKCDQCDYSAAQKSSLDLHLAKHTGDKPYMCGECGYRTALKSTLSRHMR 189
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 126 NELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
++L EH RT P++ C CDY + + H+ HTG+KPY CG+C +R+
Sbjct: 469 SQLSEHTRTHTG---EKPYK----CDQCDYSAAQKSNLNQHVAMHTGDKPYMCGECGYRA 521
Query: 186 ASVAGLHYHLK 196
+ L H++
Sbjct: 522 MQKSTLTIHMR 532
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 126 NELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
++L EH RT P++ C CDY + + H+ HTG+KPY CG+C +R+
Sbjct: 1025 SQLSEHTRTHTG---EKPYK----CDQCDYSAAQKSNLNQHVAMHTGDKPYMCGECGYRA 1077
Query: 186 ASVAGLHYHLK 196
+ L H++
Sbjct: 1078 MQKSTLTIHMR 1088
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + C+ H HTG+KPY CG+C +R+A + L H +
Sbjct: 428 YKCDQCDYSTARKFCLDQHQAKHTGDKPYMCGECGYRAARKSQLSEHTR 476
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + C+ H HTG+KPY CG+C +R+A + L H +
Sbjct: 984 YKCDQCDYSTARKFCLDQHQAKHTGDKPYMCGECGYRAARKSQLSEHTR 1032
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H RTHTGEKPY C QC + +A + L+ H+
Sbjct: 456 YMCGECGYRAARKSQLSEHTRTHTGEKPYKCDQCDYSAAQKSNLNQHV 503
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H RTHTGEKPY C QC + +A + L+ H+
Sbjct: 1012 YMCGECGYRAARKSQLSEHTRTHTGEKPYKCDQCDYSAAQKSNLNQHV 1059
Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 28/53 (52%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
T +RT + C CDY + + H+ HTGEKPY CG+C +R+A
Sbjct: 183 TLSRHMRTHTGERPYKCDHCDYSAAKKNHLDRHLAIHTGEKPYMCGECGYRTA 235
Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HTG KPY C QC + +A L YHL K
Sbjct: 624 YMCGECGYRAAQKCTLSQHMRKHTGVKPYKCDQCDYSAAQKCHLDYHLAK 673
Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KPY CG+C +R+A + H++
Sbjct: 76 MRTHTGEKPYKCDQCDYSAAQKSSLDLHLAKHTGDKPYMCGECGYRAAWESHFFRHMR 133
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + H+RTHTGEKPY C QC + +A + L HL K
Sbjct: 113 YMCGECGYRAAWESHFFRHMRTHTGEKPYKCDQCDYSAAQKSSLDLHLAK 162
Score = 45.1 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTG+KP+ CG+C +R+A + L+ H++
Sbjct: 652 YKCDQCDYSAAQKCHLDYHLAKHTGDKPFMCGECGYRAAQKSTLNVHMR 700
Score = 44.3 bits (103), Expect = 0.026, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTG KPY C QC + + + L HL K
Sbjct: 512 YMCGECGYRAMQKSTLTIHMRTHTGLKPYKCNQCDYSATCKSTLSQHLAK 561
Score = 44.3 bits (103), Expect = 0.029, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C + + + H+ TH+G+KPY CG+C +R+A + L H+
Sbjct: 372 YMCGECGFRTAYRSALSRHMTTHSGDKPYKCGECGYRAARKSTLSQHM 419
Score = 44.3 bits (103), Expect = 0.029, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C + + + H+ TH+G+KPY CG+C +R+A + L H+
Sbjct: 928 YMCGECGFRTAYRSALSRHMTTHSGDKPYKCGECGYRAARKSTLSQHM 975
Score = 42.4 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGE+PY C C + +A L HL
Sbjct: 169 YMCGECGYRTALKSTLSRHMRTHTGERPYKCDHCDYSAAKKNHLDRHL 216
Score = 39.3 bits (90), Expect = 0.88, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
++C C Y + + H+RTHTG KPY C QC + +
Sbjct: 1068 YMCGECGYRAMQKSTLTIHMRTHTGLKPYKCNQCDYSA 1105
Score = 38.9 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C Y + + H+ THTG KPY C QC + +A L H K
Sbjct: 400 YKCGECGYRAARKSTLSQHMITHTGNKPYKCDQCDYSTARKFCLDQHQAK 449
Score = 38.9 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C Y + + H+ THTG KPY C QC + +A L H K
Sbjct: 956 YKCGECGYRAARKSTLSQHMITHTGNKPYKCDQCDYSTARKFCLDQHQAK 1005
Score = 36.2 bits (82), Expect = 7.4, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 165 SHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
S +TGEKPY CG+C +R+A + L H++
Sbjct: 305 SQPEANTGEKPYRCGECGYRTAQKSQLSDHMR 336
Score = 36.2 bits (82), Expect = 7.4, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 165 SHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
S +TGEKPY CG+C +R+A + L H++
Sbjct: 861 SQPEANTGEKPYRCGECGYRTAQKSQLSDHMR 892
>gi|260813384|ref|XP_002601398.1| hypothetical protein BRAFLDRAFT_243940 [Branchiostoma floridae]
gi|229286693|gb|EEN57410.1| hypothetical protein BRAFLDRAFT_243940 [Branchiostoma floridae]
Length = 589
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
C C P++ C CDY + + + HIR HTGEKPY CG+C FR+A + L
Sbjct: 71 CGECGKHSGEKPYK----CDQCDYSAADKSTLVKHIRKHTGEKPYMCGECGFRTAGRSTL 126
Query: 192 HYHLK 196
H++
Sbjct: 127 SRHMR 131
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + ++ H+ HTGEKPY CG+C +R+A + L H++K
Sbjct: 368 YKCDRCDYSAATKTALKQHVAIHTGEKPYMCGECGYRTAQKSHLSKHMRK 417
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + G + H+ H+GEKPY CG+C +R+A+ + L H++
Sbjct: 424 YKCDQCDYAAAQKGTLDQHLMKHSGEKPYMCGECGYRTANKSHLSRHMR 472
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT F C CDY + + H+ THTGEKPY C QC + +A + L HL+K
Sbjct: 186 MRTHSGEKPFTCDRCDYSAAQKCTLDRHLMTHTGEKPYKCDQCEYAAAHKSNLDKHLRK 244
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+R HTGEKPY CG+C +R+A + L H K
Sbjct: 508 YMCGECGYRAAQKSDLSKHMRIHTGEKPYMCGECGYRTAKKSHLSRHTK 556
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C+Y + + + H+R HTGEKPY CG+C +R+A A + H++
Sbjct: 223 YKCDQCEYAAAHKSNLDKHLRKHTGEKPYMCGECGYRAALKAHVSQHMR 271
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT ++ C CDY + + H+ THTGEKP+ CG+C R+A + L+ H++
Sbjct: 130 MRTHTGERRYKCDQCDYCAARKYDLDKHLATHTGEKPFMCGECGHRTARKSTLYKHMR 187
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 28/52 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
FVC C Y + + H+RTHTGEKPY C C + + L YH+ K +
Sbjct: 12 FVCGECGYRAAYRSHISQHMRTHTGEKPYKCHHCDYAATQQGSLAYHIAKKH 63
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + N + H+RTHTGEKPY C QC + +A L +H
Sbjct: 452 YMCGECGYRTANKSHLSRHMRTHTGEKPYKCDQCDYSAAHKHHLDHH 498
Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + H HTG+KPY CG+C +R+A + L H++
Sbjct: 471 MRTHTGEKPYKCDQCDYSAAHKHHLDHHCTRHTGDKPYMCGECGYRAAQKSDLSKHMR 528
Score = 43.1 bits (100), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HTGEKPY C QC + +A L HL K
Sbjct: 396 YMCGECGYRTAQKSHLSKHMRKHTGEKPYKCDQCDYAAAQKGTLDQHLMK 445
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGE+PY C QC + +A + L HL K
Sbjct: 251 YMCGECGYRAALKAHVSQHMRTHTGERPYKCDQCDYSAAQKSTLDRHLAK 300
Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C Y A ST L +H R ++ P++ C C Y + + H+ HTGE
Sbjct: 284 CDYSAAQKSTLDRHLAKHTR--ETHTGEKPYK----CDKCVYSAAQKSTLDQHVIKHTGE 337
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
KPY CG+C + +A + L H++
Sbjct: 338 KPYMCGECGYSTAKKSHLTEHVR 360
Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H +THTGEKPY C C + +A L H+
Sbjct: 536 YMCGECGYRTAKKSHLSRHTKTHTGEKPYKCDHCHYSAARRDDLKKHV 583
Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHI-----RTHTGEKPYACGQCAFRSASVAGLHY 193
+RT + C CDY + + H+ THTGEKPY C +C + +A + L
Sbjct: 270 MRTHTGERPYKCDQCDYSAAQKSTLDRHLAKHTRETHTGEKPYKCDKCVYSAAQKSTLDQ 329
Query: 194 HL 195
H+
Sbjct: 330 HV 331
Score = 36.2 bits (82), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 15/74 (20%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHI---------------RTHTGEKPYACGQCAF 183
+RT + C+ CDY + G + HI H+GEKPY C QC +
Sbjct: 31 MRTHTGEKPYKCHHCDYAATQQGSLAYHIAKKHTGEKPYMCGECGKHSGEKPYKCDQCDY 90
Query: 184 RSASVAGLHYHLKK 197
+A + L H++K
Sbjct: 91 SAADKSTLVKHIRK 104
Score = 36.2 bits (82), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 11/82 (13%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C Y A ST L++H IR ++C C + + + H+RTHTGE
Sbjct: 88 CDYSAADKST----LVKH-------IRKHTGEKPYMCGECGFRTAGRSTLSRHMRTHTGE 136
Query: 174 KPYACGQCAFRSASVAGLHYHL 195
+ Y C QC + +A L HL
Sbjct: 137 RRYKCDQCDYCAARKYDLDKHL 158
>gi|260822707|ref|XP_002606743.1| hypothetical protein BRAFLDRAFT_196278 [Branchiostoma floridae]
gi|229292087|gb|EEN62753.1| hypothetical protein BRAFLDRAFT_196278 [Branchiostoma floridae]
Length = 357
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C Q S L L +M + + + C C S L L EH RT
Sbjct: 22 CEECSRQFSQLSDLK-----RHMRKHSGEKPYR--CEECDMQFS-RLGNLKEHMRT---H 70
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R P+ C C ++G ++ HIRTHTGEKPY CG+C+ + ++ L H++
Sbjct: 71 TREKPY----GCEECSRQFSHLGSLKRHIRTHTGEKPYMCGECSRQFNELSHLKSHMR 124
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 15/132 (11%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRP----NANNTFSPFCIYCKAVLSTNLNELIEHCRT 134
C+ C Q LD L K +P N FS C K + T+ E C
Sbjct: 190 CEECSRQFRWLDSLKKHKRTHNGEKPYRCEECNRQFSVLCNL-KTHMRTHTGEKPYRCEE 248
Query: 135 C----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFR 184
C K +RT + C C +G +++HIRTHTGEKP+ C +C+ +
Sbjct: 249 CSRQFSRPSHLKVHMRTHTGNKPYRCEECSRHYSELGTLKTHIRTHTGEKPFKCEECSSQ 308
Query: 185 SASVAGLHYHLK 196
+ + L+ H++
Sbjct: 309 FSHLVALNIHMR 320
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 17/133 (12%)
Query: 79 CKHCHSQLSHLDLLD-----HCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCR 133
C+ C Q SHL L H YM + F+ + K+ + T+ E C
Sbjct: 78 CEECSRQFSHLGSLKRHIRTHTGEKPYMC-GECSRQFNEL-SHLKSHMRTHTGEKPYKCE 135
Query: 134 TC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
C K +RT + C C +G +++HIRTHTGEKPY C +C+
Sbjct: 136 QCSKQFSIQSHLKRHMRTHTDEKPYTCEQCSSQFRQLGNLKTHIRTHTGEKPYTCEECSR 195
Query: 184 RSASVAGLHYHLK 196
+ + L H +
Sbjct: 196 QFRWLDSLKKHKR 208
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 160 IGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+G ++ H+RTHTGEKPY C +C+ + + ++ L H++K
Sbjct: 4 LGHLKVHMRTHTGEKPYRCEECSRQFSQLSDLKRHMRK 41
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T K+ IRT F C C ++ + H+RTHTGEKPY C +C+ + + L
Sbjct: 286 TLKTHIRTHTGEKPFKCEECSSQFSHLVALNIHMRTHTGEKPYRCEECSKKFIQLGHLKT 345
Query: 194 HLK 196
H++
Sbjct: 346 HMR 348
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 30/61 (49%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C + ++ H+R H+GEKPY C +C + + + L H+
Sbjct: 8 KVHMRTHTGEKPYRCEECSRQFSQLSDLKRHMRKHSGEKPYRCEECDMQFSRLGNLKEHM 67
Query: 196 K 196
+
Sbjct: 68 R 68
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ IRT + C C + ++ H RTH GEKPY C +C + + + L H+
Sbjct: 176 KTHIRTHTGEKPYTCEECSRQFRWLDSLKKHKRTHNGEKPYRCEECNRQFSVLCNLKTHM 235
Query: 196 K 196
+
Sbjct: 236 R 236
>gi|344288410|ref|XP_003415943.1| PREDICTED: RE1-silencing transcription factor [Loxodonta africana]
Length = 1052
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C + +R
Sbjct: 218 CDRCGY-----NTNRYDHYTAHLKHHTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 272
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 273 RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 324
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEH 131
KH H++ + + C C+Y R + N F C S N ++H
Sbjct: 236 KH-HTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFPRKVYTCGKCNYFSDRKNNYVQH 294
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 295 -------VRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 347
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 348 TRHARQVHN 356
Score = 40.0 bits (92), Expect = 0.60, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 308 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR--- 352
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 353 -QVHNGP--KPLNCPYCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 409
Query: 197 KTY 199
+
Sbjct: 410 SKH 412
>gi|260832630|ref|XP_002611260.1| hypothetical protein BRAFLDRAFT_71215 [Branchiostoma floridae]
gi|229296631|gb|EEN67270.1| hypothetical protein BRAFLDRAFT_71215 [Branchiostoma floridae]
Length = 790
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + G + H+ HTGEKPY CG+C +RSA + L H++
Sbjct: 143 YKCDQCDYSAAQKGNLEQHMIKHTGEKPYMCGECGYRSADRSALTVHMR 191
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + G + H+ HTGEKPY C +C +R+A + L H+K
Sbjct: 489 YKCDQCDYSAAQKGNLDQHMVKHTGEKPYLCQECGYRTADRSRLSVHMK 537
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + H+ HTGEKP+ CGQC +R+A L H+++
Sbjct: 285 YKCGQCDYSAAQKCTLDRHMTKHTGEKPFMCGQCGYRTAYKDALTVHMRR 334
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + G + H+ HTGEKPY C +C +R+A + L H+K
Sbjct: 87 YKCDQCDYSAARQGNLDQHMVKHTGEKPYLCQECGYRTADRSRLFVHMK 135
Score = 47.0 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C + + G + H+ HTGEKP+ CG+C FR+A+ L H++
Sbjct: 341 FKCDQCTFSAVAKGELDQHMTKHTGEKPFMCGECGFRTAARYSLTVHMR 389
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 27/51 (52%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+F C CDY + + H R HTGEKPY C QC + +A L H+ K
Sbjct: 460 RFSCSECDYRAAFRSKLLIHTRKHTGEKPYKCDQCDYSAAQKGNLDQHMVK 510
Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 27/51 (52%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+F C CDY + + H R HTGEKPY C QC + +A L H+ K
Sbjct: 58 RFSCTECDYRAAFRSQLLIHTRKHTGEKPYKCDQCDYSAARQGNLDQHMVK 108
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY S + H+ HTGEKPY CG+C +++ + L H++
Sbjct: 706 YKCDHCDYSSARKSDLDRHMAKHTGEKPYMCGECGYKTTGRSSLTRHMR 754
Score = 45.8 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + + H+ THTGEKPY C C + SA + L H+ K
Sbjct: 678 FMCGECGYRTVHKSKLSRHMTTHTGEKPYKCDHCDYSSARKSDLDRHMAK 727
Score = 43.5 bits (101), Expect = 0.043, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 16/63 (25%)
Query: 151 YACDYFSYNIGCMRS----------------HIRTHTGEKPYACGQCAFRSASVAGLHYH 194
Y CD + Y++ R+ H R HTGEKPY CGQC + +A L H
Sbjct: 244 YKCDQYDYSVTDKRTVDRRDFRTAAKAKLLRHTRKHTGEKPYKCGQCDYSAAQKCTLDRH 303
Query: 195 LKK 197
+ K
Sbjct: 304 MTK 306
Score = 43.1 bits (100), Expect = 0.059, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H++THTG KPY C QC + +A L H+ K
Sbjct: 115 YLCQECGYRTADRSRLFVHMKTHTGMKPYKCDQCDYSAAQKGNLEQHMIK 164
Score = 42.7 bits (99), Expect = 0.075, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C Y + + + H+RTHTG +PY C QC F +A L H+ +
Sbjct: 622 YKCGECGYRAADRSALTVHMRTHTGVRPYKCDQCNFSAAQKCNLDGHMAQ 671
Score = 42.7 bits (99), Expect = 0.080, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 10/85 (11%)
Query: 121 LSTNLNELIEHCRTC--KSMIRTDPFRH--------KFVCYACDYFSYNIGCMRSHIRTH 170
++T+ E C C S ++D RH ++C C Y + + H+RTH
Sbjct: 697 MTTHTGEKPYKCDHCDYSSARKSDLDRHMAKHTGEKPYMCGECGYKTTGRSSLTRHMRTH 756
Query: 171 TGEKPYACGQCAFRSASVAGLHYHL 195
TG KPY C QC + +A + + H+
Sbjct: 757 TGVKPYKCDQCDYSAAKKSDVDRHM 781
Score = 40.8 bits (94), Expect = 0.30, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
HI HT EKPY CG+C +R+A + L H++
Sbjct: 612 HIAKHTSEKPYKCGECGYRAADRSALTVHMR 642
Score = 39.3 bits (90), Expect = 0.95, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + C C++ + + H+ HTG KP+ CG+C +R+ + L H+
Sbjct: 641 MRTHTGVRPYKCDQCNFSAAQKCNLDGHMAQHTGNKPFMCGECGYRTVHKSKLSRHM 697
Score = 38.1 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 25/50 (50%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + H+R HTG K + C QC F + + L H+ K
Sbjct: 313 FMCGQCGYRTAYKDALTVHMRRHTGVKLFKCDQCTFSAVAKGELDQHMTK 362
Score = 37.7 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 17/65 (26%)
Query: 148 FVCYACDYFSYNIGCMRSHIR-----------------THTGEKPYACGQCAFRSASVAG 190
++C C Y S + + H+R HTGEKP+ CG+C +R+A
Sbjct: 171 YMCGECGYRSADRSALTVHMRGHTAEEPWKSGLDKHKAKHTGEKPFMCGECGYRTAQRCH 230
Query: 191 LHYHL 195
L H+
Sbjct: 231 LSRHM 235
>gi|260814396|ref|XP_002601901.1| hypothetical protein BRAFLDRAFT_86384 [Branchiostoma floridae]
gi|229287204|gb|EEN57913.1| hypothetical protein BRAFLDRAFT_86384 [Branchiostoma floridae]
Length = 801
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Query: 121 LSTNLNELIEHCRTCK--SMIRTDPFRH--------KFVCYACDYFSYNIGCMRSHIRTH 170
+S ++ + C CK +M ++ RH F C CD+ + + H+R H
Sbjct: 564 MSVHVTDKTYKCPHCKYSTMYKSILDRHVIQHTGEKPFTCTECDFKATQKAILARHMRVH 623
Query: 171 TGEKPYACGQCAFRSASVAGLHYHLKK 197
TGEKPY C QC + +A L H+ K
Sbjct: 624 TGEKPYKCTQCDYSAAQKTNLDSHMAK 650
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 27/139 (19%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYC------KAVLSTNL----NEL 128
C HC + +LD ++I+ F+ C C KA+L+ ++ E
Sbjct: 575 CPHCKYSTMYKSILDR-----HVIQHTGEKPFT--CTECDFKATQKAILARHMRVHTGEK 627
Query: 129 IEHCRTC------KSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYAC 178
C C K+ + + +H ++C C Y + + + H + HTG+KPY C
Sbjct: 628 PYKCTQCDYSAAQKTNLDSHMAKHTGDKPYMCEDCGYRTVHRSYLAKHRKIHTGDKPYKC 687
Query: 179 GQCAFRSASVAGLHYHLKK 197
QC F +++ GL H+ K
Sbjct: 688 KQCPFSASTQQGLDKHMGK 706
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK-----KTY 199
+ C CDY + + H+ HTGEKPY C QC FR+A L H+ KTY
Sbjct: 517 YKCDQCDYTAALKDYLDRHMAKHTGEKPYMCHQCGFRTAQKYNLSRHMSVHVTDKTY 573
Score = 38.9 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 144 FRHK---FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
F H+ + C CD+ + + H+ H+GEKP+ C +C +++A L H ++
Sbjct: 454 FTHRDLPYSCTKCDFTTTFKQHLHKHMAKHSGEKPHVCVECGYQTAEKHRLTRHFAASH 512
Score = 37.4 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CD+ + + H+ H K YACG+C F +A YHL+K
Sbjct: 405 YRCEKCDFSTTKKRGLDRHMAKHATGKTYACGECEF----IATAKYHLRK 450
>gi|260832594|ref|XP_002611242.1| hypothetical protein BRAFLDRAFT_71201 [Branchiostoma floridae]
gi|229296613|gb|EEN67252.1| hypothetical protein BRAFLDRAFT_71201 [Branchiostoma floridae]
Length = 1259
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C CDY + G + H+ HTGEKPY CG+C +R+A + L H++K
Sbjct: 936 MRTHTVVKPYRCDQCDYSTAWKGNLDGHVVQHTGEKPYVCGECGYRTAVRSHLTVHMRK 994
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 8/84 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C C + +T ++ + H RT PF+ C CDY + + H+ HTGE
Sbjct: 807 CTEC-SYTTTKKDKFVRHTRTHTG---EKPFK----CDRCDYSAAEKSTFKYHMAQHTGE 858
Query: 174 KPYACGQCAFRSASVAGLHYHLKK 197
KPY CG+C +R+A + L H+++
Sbjct: 859 KPYKCGECEYRTAMKSHLSEHMRR 882
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y S + + H+R HTGEKPY C QC + +A + L YH+ +
Sbjct: 427 FMCGECGYRSADRSVLTKHMRMHTGEKPYKCDQCDYSAAQRSHLKYHMAQ 476
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C CD+ S + HIRTHTGEKPY C +C +R+A + L H+++
Sbjct: 614 MRTHTGEKPYKCDRCDHSSAKKCNLDVHIRTHTGEKPYVCDECEYRTAVKSHLSEHMRR 672
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + H+ HTGEKPY CG+C +R+A + L H+++
Sbjct: 1111 YKCDRCDYSAAEKSTFKYHMAQHTGEKPYKCGECEYRTAMKSHLSEHMRR 1160
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 146 HKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
H+F C C Y + H RTHTGEKP+ C +C + +A + YH+ +
Sbjct: 803 HRFECTECSYTTTKKDKFVRHTRTHTGEKPFKCDRCDYSAAEKSTFKYHMAQ 854
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + ++ H+RTHTG KPY C QC F +A + L+ H+
Sbjct: 184 YMCGECGYRTADRSALKVHMRTHTGVKPYKCNQCDFSAAVKSNLNQHM 231
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C+Y + + G + H HTGEKPY CG+C +R+A + L H++
Sbjct: 156 YKCGQCEYSAASKGDVDRHRAKHTGEKPYMCGECGYRTADRSALKVHMR 204
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + ++ H+ HTGEKP+ CG+C +R+A + L H+++
Sbjct: 455 YKCDQCDYSAAQRSHLKYHMAQHTGEKPFKCGECEYRTAMKSHLSEHMRR 504
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + G + H HTGEKP CG+C +R+A + L+ H+++
Sbjct: 100 YKCDQCDYSAAQKGKLDRHRAKHTGEKPLMCGECGYRTADRSYLYVHMRR 149
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
KS +R + C CDY + + H+ THTGEK Y CG+C +R+A + L H+
Sbjct: 330 KSHMRKHTGEKPYKCDRCDYSAAWKDNLDLHMSTHTGEKRYMCGECGYRTADRSHLSRHM 389
Query: 196 KK 197
++
Sbjct: 390 RR 391
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C+Y + + H+R HTGEKPY C QC + AS + L H+ K
Sbjct: 861 YKCGECEYRTAMKSHLSEHMRRHTGEKPYKCDQCDYSGASKSNLDQHMAK 910
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C+Y + + H+R HTGEKPY C QC + AS + L H+ K
Sbjct: 1139 YKCGECEYRTAMKSHLSEHMRRHTGEKPYKCDQCDYSGASKSNLDQHMAK 1188
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C + + + +H+RTHTGEKPY C +C SA L H++
Sbjct: 595 YICGECGFMTVASSSLTTHMRTHTGEKPYKCDRCDHSSAKKCNLDVHIR 643
Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 143 PFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C CDY + + H+ HTGEKPY CG+C F + + + L H++
Sbjct: 566 PYR----CDQCDYSAARKRSLDRHMAKHTGEKPYICGECGFMTVASSSLTTHMR 615
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C Y + + + H+R HTGEKPY CGQC + +AS + H K
Sbjct: 128 LMCGECGYRTADRSYLYVHMRRHTGEKPYKCGQCEYSAASKGDVDRHRAK 177
Score = 44.7 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+F C C Y + ++SH+R HTGEKPY C +C + +A L H+
Sbjct: 313 RFACTDCGYRTDRKYLLKSHMRKHTGEKPYKCDRCDYSAAWKDNLDLHM 361
Score = 44.3 bits (103), Expect = 0.031, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F C C+Y + + H+R H GEKPY C QC + AS + L H+
Sbjct: 483 FKCGECEYRTAMKSHLSEHMRRHKGEKPYKCDQCDYSGASKSNLDQHM 530
Score = 43.9 bits (102), Expect = 0.032, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 143 PFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P++ K+ C CDY + + G + H+ THT KP+ CG+C +RSA + L H++
Sbjct: 397 PYK-KYKCDQCDYSAASKGELDRHMTTHT--KPFMCGECGYRSADRSVLTKHMR 447
Score = 43.9 bits (102), Expect = 0.040, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 130 EHCRTCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
E+ KS + RHK + C CDY + + H+ H +K Y CG+C FR+
Sbjct: 489 EYRTAMKSHLSEHMRRHKGEKPYKCDQCDYSGASKSNLDQHMAIHAEDKRYVCGECGFRT 548
Query: 186 ASVAGLHYHLK 196
A+ + L H+K
Sbjct: 549 AAKSSLKVHMK 559
Score = 43.5 bits (101), Expect = 0.043, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 146 HKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
H F C CD+ + H R HT EKPY C +C + +A + YH+ +
Sbjct: 1081 HHFECTECDFTTTKKDTFVIHTRRHTVEKPYKCDRCDYSAAEKSTFKYHMAQ 1132
Score = 42.0 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ H EK Y CG+C FR+A+ + L H++
Sbjct: 889 YKCDQCDYSGASKSNLDQHMAKHAEEKRYVCGECGFRTAAKSSLTRHMR 937
Score = 40.8 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++VC C + + ++ H++THT KPY C QC + +A L H+ K
Sbjct: 538 RYVCGECGFRTAAKSSLKVHMKTHTCVKPYRCDQCDYSAARKRSLDRHMAK 588
Score = 40.8 bits (94), Expect = 0.33, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ H +K Y CG+C FR+A+ + L H++
Sbjct: 1167 YKCDQCDYSGASKSNLDQHMAKHAEDKRYVCGECGFRTAARSSLTRHMR 1215
Score = 40.4 bits (93), Expect = 0.45, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++VC C + + + H+RTHT KPY+C QC + +A L H+
Sbjct: 1194 RYVCGECGFRTAARSSLTRHMRTHTRVKPYSCDQCDYSTAWKGNLDRHV 1242
Score = 39.7 bits (91), Expect = 0.77, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKP---YACGQCAFRSASVAGLHYHL 195
+++C C Y + + + H+R HTG+KP Y C QC + +AS L H+
Sbjct: 369 RYMCGECGYRTADRSHLSRHMRRHTGDKPYKKYKCDQCDYSAASKGELDRHM 420
Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++VC C + + + H+RTHT KPY C QC + +A L H+
Sbjct: 916 RYVCGECGFRTAAKSSLTRHMRTHTVVKPYRCDQCDYSTAWKGNLDGHV 964
Score = 37.0 bits (84), Expect = 4.5, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 18/32 (56%)
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
H R HTGEKPY C QC + +A L H K
Sbjct: 90 HKRKHTGEKPYKCDQCDYSAAQKGKLDRHRAK 121
Score = 36.2 bits (82), Expect = 8.0, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACG 179
+RT + C CDY + G + H+ HTG+KPY CG
Sbjct: 1214 MRTHTRVKPYSCDQCDYSTAWKGNLDRHVVQHTGDKPYVCG 1254
>gi|260804322|ref|XP_002597037.1| hypothetical protein BRAFLDRAFT_145009 [Branchiostoma floridae]
gi|229282299|gb|EEN53049.1| hypothetical protein BRAFLDRAFT_145009 [Branchiostoma floridae]
Length = 351
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 33/59 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
IR F C CDY S + G + HI HTGEKPY CG+C FR+ + L H++K
Sbjct: 203 IRRHTGEKPFKCDLCDYSSADKGNLDRHILKHTGEKPYMCGECGFRTTYKSELTIHMRK 261
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDYF+ + H+ HTGEKPY CG+C +R+A + L HL+
Sbjct: 5 LRTHTGEKPYKCDKCDYFAAQKSHLDEHLARHTGEKPYMCGKCGYRTACKSDLTKHLR 62
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C CD+ + + H+ HTGEKPY CG+C FR+A+ + L H+K+
Sbjct: 296 FKCDQCDHSAVRRSDLDKHMLVHTGEKPYMCGECYFRTANKSNLAVHMKQ 345
Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC A + L+ HL K
Sbjct: 42 YMCGKCGYRTACKSDLTKHLRTHTGEKPYKCDQCDSSFAVKSHLNRHLTK 91
Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC +F + +G H+++
Sbjct: 98 YMCGECGYRTACKSDLTKHLRTHTGEKPYKCDQCDSSFAATYRSGFLQHMRR 149
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+F+C C + + + + HIR HTGEKP+ C C + SA L H+
Sbjct: 183 RFMCGICGHRTPDKANIVRHIRRHTGEKPFKCDLCDYSSADKGNLDRHI 231
Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
H+RTHTGEKPY C +C + +A + L HL
Sbjct: 4 HLRTHTGEKPYKCDKCDYFAAQKSHLDEHL 33
Score = 35.8 bits (81), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 139 IRTDPFRHKFVCYACD---YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + C CD +Y G ++ H+R HTGEKP+ C QC F +A L H+
Sbjct: 117 LRTHTGEKPYKCDQCDSSFAATYRSGFLQ-HMRRHTGEKPHMCDQCDFTTAWKNHLKRHM 175
>gi|345806243|ref|XP_850786.2| PREDICTED: uncharacterized protein LOC608616 [Canis lupus
familiaris]
Length = 667
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+S +R FVC C+ +R+H+R HTGE+PY C C + +AGL H
Sbjct: 562 RSHMRIHTLDKPFVCRFCNRRFSQSSTLRNHVRLHTGERPYKCQVCQSAYSQLAGLRAHQ 621
Query: 196 KKTYH 200
K H
Sbjct: 622 KSARH 626
>gi|260823100|ref|XP_002604021.1| hypothetical protein BRAFLDRAFT_71690 [Branchiostoma floridae]
gi|229289346|gb|EEN60032.1| hypothetical protein BRAFLDRAFT_71690 [Branchiostoma floridae]
Length = 725
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 53/131 (40%), Gaps = 29/131 (22%)
Query: 95 CKTCSYMIRPNANNTF--------SPF----CIYCKAVLSTNLNELIEH-------CRTC 135
C C Y NAN + P+ C Y A ST N L++H C C
Sbjct: 65 CGECGYRTAVNANLSRHMRTHTGERPYKCDQCDYSAAQKSTLDNHLVKHTGDKPYMCGEC 124
Query: 136 ----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
+ +RT + C CDY + G + H+ HT EKPY CG+C +R+
Sbjct: 125 GFRTTRKSHLSAHMRTHTGERPYKCDKCDYSAAQKGNLNKHLAKHTDEKPYMCGECGYRT 184
Query: 186 ASVAGLHYHLK 196
A L H++
Sbjct: 185 ARKFDLSQHMR 195
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + HIR HT EKPY CG+C +R+A + L H++
Sbjct: 488 MRTHTGERPYKCDQCDYCAADKSTLVRHIRKHTDEKPYMCGECGYRAAQKSHLSAHMR 545
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + HIR HT EKPY CG+C +R+A + L H++
Sbjct: 600 MRTHTGERPYKCDQCDYCAADKSTLVRHIRKHTDEKPYMCGECGYRAAQKSHLSAHMR 657
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC A ST L+ H IR ++C C Y + + +H+R HTGE
Sbjct: 502 CDYCAADKST----LVRH-------IRKHTDEKPYMCGECGYRAAQKSHLSAHMRIHTGE 550
Query: 174 KPYACGQCAFRSASVAGLHYHLKK 197
KPY C QC + +A + L+ HL K
Sbjct: 551 KPYKCDQCDYSAAQKSDLNKHLAK 574
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + +H+RTHTGEKPY C QC + +A + L+ HL K
Sbjct: 413 YMCEECGFRTSRKFNLSAHMRTHTGEKPYKCDQCDYSAAQKSDLNKHLAK 462
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
RTD ++C C Y + + H+RTHTGE+PY C QC + +A + L HL K
Sbjct: 57 RTD--EKPYMCGECGYRTAVNANLSRHMRTHTGERPYKCDQCDYSAAQKSTLDNHLVK 112
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 17/100 (17%)
Query: 114 CIYCKAVLSTNLNELIEH-------CRTC----------KSMIRTDPFRHKFVCYACDYF 156
C YC A ST + + +H C C + +R + C CDY
Sbjct: 614 CDYCAADKSTLVRHIRKHTDEKPYMCGECGYRAAQKSHLSAHMRIHTGEKPYKCDQCDYS 673
Query: 157 SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ G + H+ HTGEK + CG+C +R++ L H++
Sbjct: 674 AAQKGTLDDHVANHTGEKTFMCGECGYRTSRRPYLTRHMR 713
Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HT EKPY CG+C R+A + L H++
Sbjct: 432 MRTHTGEKPYKCDQCDYSAAQKSDLNKHLAKHTSEKPYICGECGHRTARKSYLSQHMR 489
Score = 44.7 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H+RTHTGE+PY C QC + +A + L H++K
Sbjct: 469 YICGECGHRTARKSYLSQHMRTHTGERPYKCDQCDYCAADKSTLVRHIRK 518
Score = 44.7 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H+RTHTGE+PY C QC + +A + L H++K
Sbjct: 581 YICGECGHRAARKSYLSQHMRTHTGERPYKCDQCDYCAADKSTLVRHIRK 630
Score = 41.2 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGE+ Y C QC + S+ + L H+ K
Sbjct: 175 YMCGECGYRTARKFDLSQHMRTHTGEQNYKCDQCNYSSSRKSHLEQHVAK 224
Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G M H+ T EKPY CG+C +R+A A L H++
Sbjct: 48 GNMGRHVVRRTDEKPYMCGECGYRTAVNANLSRHMR 83
Score = 38.1 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G M H+ HTG+KPY C +C FR++ L H++
Sbjct: 398 GDMGRHVVKHTGQKPYMCEECGFRTSRKFNLSAHMR 433
>gi|260812287|ref|XP_002600852.1| hypothetical protein BRAFLDRAFT_279090 [Branchiostoma floridae]
gi|229286142|gb|EEN56864.1| hypothetical protein BRAFLDRAFT_279090 [Branchiostoma floridae]
Length = 280
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 99 SYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFS 157
S + +P AN P+ C C + + L H +RT F C CDY +
Sbjct: 43 SAVSQPKANTGEKPYMCGEC-GYRTAWESHLSRH-------MRTHTGEKPFKCDQCDYSA 94
Query: 158 YNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++ H+ HTGEKPY CG+C +R++ + L H++
Sbjct: 95 AEKSAVKQHLAKHTGEKPYMCGECGYRTSLKSNLSRHIR 133
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGEKPY C QC + +A L HL
Sbjct: 225 YMCGECGYRTSRKSHLSQHMRTHTGEKPYKCDQCDYSAAHKGSLDQHL 272
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C Y + + ++ H+ H GEKPY CG+C +R++ + L H++
Sbjct: 188 MRTHTGEKPYKCDQCGYSASHKSTLKQHLAKHAGEKPYMCGECGYRTSRKSHLSQHMR 245
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 40/90 (44%)
Query: 108 NTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHI 167
+ SP C S ++ + S + + ++C C Y + + H+
Sbjct: 17 DDGSPTGFLCNRDASQTKDQPTASKSSAVSQPKANTGEKPYMCGECGYRTAWESHLSRHM 76
Query: 168 RTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
RTHTGEKP+ C QC + +A + + HL K
Sbjct: 77 RTHTGEKPFKCDQCDYSAAEKSAVKQHLAK 106
Score = 43.1 bits (100), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + ++ + L HL K
Sbjct: 169 YMCDECGYRTTQKCHLSVHMRTHTGEKPYKCDQCGYSASHKSTLKQHLAK 218
>gi|332228769|ref|XP_003263563.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 40 [Nomascus
leucogenys]
Length = 2717
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 55 LDQILNLNLSVLLVTTIPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSP-F 113
L+++ N+ ++ + T P+ SQ++ D H + S + AN+T SP
Sbjct: 322 LERVYNIAVTSSVGLTSPSS--------RSQVTPQD--QHMDSASPLSISPANSTQSPPM 371
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH--KFVCYACDYFSYNIGCMRSHIRTHT 171
IY +++ +N+ +E + C +++ + K++C C+ + HIR+HT
Sbjct: 372 PIYNSTHVASVVNQSVE--QMCNLLLKDQKPKKQGKYICEYCNRACAKPSVLLKHIRSHT 429
Query: 172 GEKPYACGQCAFRSASVAGLHYHLKKTYH 200
GE+PY C C F + + L+ H K H
Sbjct: 430 GERPYPCVTCGFSFKTKSNLYKHKKSHAH 458
Score = 44.3 bits (103), Expect = 0.028, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 2085 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 2140
>gi|334331335|ref|XP_001369959.2| PREDICTED: RE1-silencing transcription factor [Monodelphis
domestica]
Length = 940
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 43/112 (38%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C K +R
Sbjct: 222 CDRCGY-----NTNRYDHYLAHLKHHNKAGENERVYKCMLCTYTTVSEYHWKKHLRNHFP 276
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ + C C YFS HIRTHTGE+PY C C + S+ L H++
Sbjct: 277 KKVYTCSQCSYFSDRKNNYIQHIRTHTGERPYQCVMCPYSSSQKTHLTRHMR 328
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCK--AVLSTNLNELIEH 131
KH H++ + + C C+Y + + N F C + S N I+H
Sbjct: 240 KH-HNKAGENERVYKCMLCTYTTVSEYHWKKHLRNHFPKKVYTCSQCSYFSDRKNNYIQH 298
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
IRT + C C Y S + H+RTH+GEKP+ C QC + +++ +
Sbjct: 299 -------IRTHTGERPYQCVMCPYSSSQKTHLTRHMRTHSGEKPFKCEQCNYVASNQHEV 351
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 352 TRHARQVHN 360
Score = 40.4 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
+C + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 312 MCPYSSSQKTHLT--RHMRT---------HSGEKPFKCEQCNYV-ASNQHEVTRHAR--- 356
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH+K
Sbjct: 357 -QVHNGP--KPLTCPHCDYKTADRSNFKKHVELHVNPRQFLCPVCDYAASKKCNLQYHIK 413
Query: 197 KTY 199
+
Sbjct: 414 SRH 416
>gi|260810937|ref|XP_002600179.1| hypothetical protein BRAFLDRAFT_66687 [Branchiostoma floridae]
gi|229285465|gb|EEN56191.1| hypothetical protein BRAFLDRAFT_66687 [Branchiostoma floridae]
Length = 511
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C CDY + N + H+R HTGEKPY C QC F +A + H++K
Sbjct: 315 YICVECDYRAPNGFSLTEHVRIHTGEKPYKCDQCDFSTAWKTSIDMHMRK 364
Score = 42.7 bits (99), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
K C C Y + + + H++THTG+ PY CGQC + + L H+ K
Sbjct: 426 KHKCNVCGYRTAHKHGLNRHMKTHTGDNPYKCGQCDYSAVQKRDLDVHMSK 476
Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C + + + H+ THTGEK + C C +R+A GL+ H+K
Sbjct: 399 YKCQLCGFSTARKSNLSEHVATHTGEKKHKCNVCGYRTAHKHGLNRHMK 447
Score = 36.6 bits (83), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 139 IRTDPFRHKFVCYACDYF-SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+R + +VC C Y SY + R H+ THTG+ PY C C F +A + L H+
Sbjct: 362 MRKHSGKKPYVCQECGYSTSYRVHLTR-HMITHTGQYPYKCQLCGFSTARKSNLSEHV 418
Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + H+ HT K Y C +C R+A + L+ H +K
Sbjct: 455 YKCGQCDYSAVQKRDLDVHMSKHTDGKTYQCEECGHRAADTSDLNKHKRK 504
>gi|260841475|ref|XP_002613940.1| hypothetical protein BRAFLDRAFT_118475 [Branchiostoma floridae]
gi|229299330|gb|EEN69949.1| hypothetical protein BRAFLDRAFT_118475 [Branchiostoma floridae]
Length = 1091
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 42/80 (52%), Gaps = 14/80 (17%)
Query: 132 CRTC-KSMIRTDPFR---------HKF-VCYACD-YFSYNIGCMRSHIRTHTGEKPYACG 179
C TC KS D FR HK C C F Y+ G +++H+R HTGEKP+AC
Sbjct: 881 CSTCNKSFTNHDLFRAHVREEHVNHKVHECGKCHATFKYS-GALKTHMRVHTGEKPFACD 939
Query: 180 QCAFRSASVAGLHYHLKKTY 199
+C R + LH H KKT+
Sbjct: 940 KCGARFTQLGNLHRH-KKTH 958
Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 43/112 (38%), Gaps = 18/112 (16%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C TC N +F+ ++ V ++N + C C K+ +R
Sbjct: 881 CSTC--------NKSFTNHDLFRAHVREEHVNHKVHECGKCHATFKYSGALKTHMRVHTG 932
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C +G + H +TH G KPY CG C R + + HLK
Sbjct: 933 EKPFACDKCGARFTQLGNLHRHKKTHDGLKPYQCGLCNARFTRLGSVQEHLK 984
Score = 42.4 bits (98), Expect = 0.097, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 18/120 (15%)
Query: 79 CKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
C C ++ + L +L H KT ++ P+ C C A T L + EH +
Sbjct: 938 CDKCGARFTQLGNLHRHKKT---------HDGLKPYQCGLCNARF-TRLGSVQEHLK--- 984
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
I T + F C C G +R+H+R H+GE+P++C C + GL H K
Sbjct: 985 --IHTGE-KKPFQCQVCTAEFTRHGHLRNHMRIHSGERPFSCTVCGAQFRHPGGLKQHKK 1041
>gi|260823110|ref|XP_002604026.1| hypothetical protein BRAFLDRAFT_57765 [Branchiostoma floridae]
gi|229289351|gb|EEN60037.1| hypothetical protein BRAFLDRAFT_57765 [Branchiostoma floridae]
Length = 263
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+R HTGEKPY CG+C +RS + L H++
Sbjct: 113 MRTHTGEKPYKCDQCDYSAAQKSTLDQHLRKHTGEKPYTCGECGYRSVQKSDLSKHMR 170
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C Y S + H+RTHTGEKPY CG+C +R+A + L H++
Sbjct: 150 YTCGECGYRSVQKSDLSKHMRTHTGEKPYKCGECGYRTAYKSDLSRHMR 198
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + H+R HTGEKPY CG+C +R+A L H+K
Sbjct: 1 MRTHTGEKPYKCDQCDYSAAHKSHLNRHLRKHTGEKPYMCGECGYRTAQRCTLSLHMK 58
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT ++C CDY + + H+R HTGEKPY CG+C +R+ + L H++
Sbjct: 197 MRTHSGEKPYMCGQCDYSATEKSHLDRHLRKHTGEKPYMCGECGYRTTQKSVLSRHMR 254
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C+Y + + + H+R HTGEKPY CG+C FR+ L H++
Sbjct: 66 YKCDQCEYAAAHKSNLDKHLRKHTGEKPYMCGECGFRTTHKESLSRHMR 114
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C C Y + + H+RTH+GEKPY CGQC + + + L HL+K
Sbjct: 169 MRTHTGEKPYKCGECGYRTAYKSDLSRHMRTHSGEKPYMCGQCDYSATEKSHLDRHLRK 227
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + + H+RTHTGEKPY C QC + +A + L HL+K
Sbjct: 94 YMCGECGFRTTHKESLSRHMRTHTGEKPYKCDQCDYSAAQKSTLDQHLRK 143
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H++THTGEKPY C QC + +A + L HL+K
Sbjct: 38 YMCGECGYRTAQRCTLSLHMKTHTGEKPYKCDQCEYAAAHKSNLDKHLRK 87
Score = 39.7 bits (91), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 167 IRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RTHTGEKPY C QC + +A + L+ HL+K
Sbjct: 1 MRTHTGEKPYKCDQCDYSAAHKSHLNRHLRK 31
>gi|260823054|ref|XP_002603998.1| hypothetical protein BRAFLDRAFT_71713 [Branchiostoma floridae]
gi|229289323|gb|EEN60009.1| hypothetical protein BRAFLDRAFT_71713 [Branchiostoma floridae]
Length = 497
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CDY + + + H+ TH GEKPY CG+C FR+ + L H++
Sbjct: 376 MRTHTGERPFKCDQCDYSAAHKSTLDEHVTTHIGEKPYMCGECGFRATRKSELSRHMR 433
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 151 YACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
Y C Y + + H RTHTGEKPY C QC + +A + L+ HL K
Sbjct: 248 YMCGYRTAKKSHLSQHTRTHTGEKPYKCDQCVYSAAGKSALNQHLAK 294
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RT + C C Y + + H+ HTGEKPY CG+C +R+A + L H++
Sbjct: 264 TRTHTGEKPYKCDQCVYSAAGKSALNQHLAKHTGEKPYMCGECGYRTAWKSHLSQHMR 321
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGEKPY C QC + +A + L H+
Sbjct: 301 YMCGECGYRTAWKSHLSQHMRTHTGEKPYKCDQCDYSAAQKSTLDQHV 348
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 47/118 (39%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C C +H LD T +P C C +T +EL H
Sbjct: 387 CDQCDYSAAHKSTLDEHVTTHIGEKPY-------MCGEC-GFRATRKSELSRH------- 431
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKP CG+C +R+ + L H++
Sbjct: 432 MRTHTGEKPYKCDQCDYSAARKCTLDEHLTIHTGEKPNMCGECGYRTTRKSNLSRHMR 489
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ H+GEKPY C C +R+A + L H++
Sbjct: 320 MRTHTGEKPYKCDQCDYSAAQKSTLDQHVIKHSGEKPYNCEMCGYRTAKKSHLSRHMR 377
>gi|260823120|ref|XP_002604031.1| hypothetical protein BRAFLDRAFT_71679 [Branchiostoma floridae]
gi|229289356|gb|EEN60042.1| hypothetical protein BRAFLDRAFT_71679 [Branchiostoma floridae]
Length = 699
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + A + L+YHL K
Sbjct: 420 YMCGECGYRTAQRSNLSRHMRTHTGEKPYKCNQCDYSYADKSALNYHLGK 469
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CD+ + + H+ HTGEKPY CG+C +R+A + L H++
Sbjct: 383 MRTHTGERPFKCDHCDFSAAQKSTLDDHLTKHTGEKPYMCGECGYRTAQRSNLSRHMR 440
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+RTHTGEKPY C QC + +AS + H++K
Sbjct: 228 YMCGECGYRATQMSDLSKHMRTHTGEKPYKCDQCNYSAASKFSFNRHVRK 277
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Query: 143 PFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C CDY++ + H+RTHTGEKP+ CG+C +R++ + H++
Sbjct: 531 PYR----CDQCDYYAVQKYRLVDHLRTHTGEKPFMCGKCGYRASQKSHSSKHMR 580
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++T + C CDY S + H HTGEKPY CG+C +R+A A L H+K
Sbjct: 635 MKTHTGEKPYKCDQCDYSSALKHHLIDHQTRHTGEKPYMCGECGYRAAQRATLSRHMK 692
Score = 47.0 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CD+ + + ++ H HTGEKPY CG+CA+ +A + L H+K
Sbjct: 579 MRTHTGEKPYKCDQCDFSAIDKFKLKQHQVKHTGEKPYKCGECAYMTAYRSHLSRHMK 636
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A L H+ K
Sbjct: 476 YICGECGYRATRKNDLSRHMRTHTGEKPYKCDQCDYSAARKINLVQHMTK 525
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 28/59 (47%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT F+C C Y + H+RTHTGEKPY C QC F + L H K
Sbjct: 551 LRTHTGEKPFMCGKCGYRASQKSHSSKHMRTHTGEKPYKCDQCDFSAIDKFKLKQHQVK 609
Score = 45.1 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C+ C Y + + H+RTHTGE+P+ C C F +A + L HL K
Sbjct: 364 YMCWDCGYRTDRKYHLSRHMRTHTGERPFKCDHCDFSAAQKSTLDDHLTK 413
Score = 42.7 bits (99), Expect = 0.080, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+ HTGEKPY C QC + +A + L H+ K
Sbjct: 170 YMCGECGYRAAKKSHLSQHMTIHTGEKPYKCDQCDYSAARKSHLERHVAK 219
Score = 42.7 bits (99), Expect = 0.088, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHT--GEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HT G+KPY CG+C +R+ ++ L H++
Sbjct: 198 YKCDQCDYSAARKSHLERHVAKHTATGDKPYMCGECGYRATQMSDLSKHMR 248
Score = 42.4 bits (98), Expect = 0.098, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C C Y + + H++THTGEKPY C QC + SA L +HL
Sbjct: 616 YKCGECAYMTAYRSHLSRHMKTHTGEKPYKCDQCDYSSA----LKHHL 659
Score = 40.0 bits (92), Expect = 0.46, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
Query: 122 STNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
+T N+L H +RT + C CDY + + H+ HTGEKPY C QC
Sbjct: 485 ATRKNDLSRH-------MRTHTGEKPYKCDQCDYSAARKINLVQHMTKHTGEKPYRCDQC 537
Query: 182 AFRSASVAGLHYHLK 196
+ + L HL+
Sbjct: 538 DYYAVQKYRLVDHLR 552
Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
H+ HT EKPY CG+C +R+A + L H+
Sbjct: 160 HVVKHTSEKPYMCGECGYRAAKKSHLSQHM 189
>gi|260789295|ref|XP_002589682.1| hypothetical protein BRAFLDRAFT_61494 [Branchiostoma floridae]
gi|229274864|gb|EEN45693.1| hypothetical protein BRAFLDRAFT_61494 [Branchiostoma floridae]
Length = 527
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 83/188 (44%), Gaps = 25/188 (13%)
Query: 13 FLVILEPTLERNRTNITSDV-YIAVLVFSNLTFFITAQLVLMSLDQILNLNLSVLLVTTI 71
+ + TL+++ T D YI + + ++ + + +LS+ L T
Sbjct: 185 YSAAQKNTLDQHLAKHTGDKPYIRLAKHTGDKPYMCGECGYRT---ARRSDLSIHLRTHT 241
Query: 72 PTQNH--SLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNEL 128
+ + C + +Q S+LD S++ + + + P+ C C +T + L
Sbjct: 242 GEKPYKCDQCDYSAAQKSNLD--------SHLTKHTSGD--KPYMCGEC-GYRTTRKSHL 290
Query: 129 IEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASV 188
EH RT P++ C CDY + + H+ THTG+KPY CG+C +R+A
Sbjct: 291 AEHMRT---HTGDKPYK----CDQCDYSAAQKSALNRHLATHTGDKPYMCGECGYRAAQK 343
Query: 189 AGLHYHLK 196
+ L H++
Sbjct: 344 SALSRHMR 351
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKT 198
+RT + C CDY + + H+ HTGEKPY G+C +R+A + L H++KT
Sbjct: 462 MRTHTGEKPYKCDQCDYSAARKDNLYQHLTVHTGEKPYKSGECGYRTAQKSNLSTHMRKT 521
Query: 199 Y 199
+
Sbjct: 522 H 522
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ +HTGEKPY CG+C +R+A L H++
Sbjct: 406 MRTHTGDKPYKCDQCDYSAAQTSALNRHLASHTGEKPYMCGECGYRTAYKPTLSIHMR 463
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CDY + + H+ HTG+KPY CG+C +R+ + L H++
Sbjct: 57 VRTHTGEKPFKCDQCDYSASQKSALNQHLAIHTGDKPYMCGECGYRTVQKSHLAEHMR 114
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KPY CG+C +R+A + L H++
Sbjct: 1 MRTHTGEKPYKCDQCDYSAARKSNLDRHLAKHTGDKPYMCGECGYRTAKRSHLAEHVR 58
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + HI HTGEKPY C QC +R+A L H++
Sbjct: 350 MRTHTGDKPYKCDQCDYSTARKSHLDQHIAKHTGEKPYLCDQCGYRTAQKYSLFQHMR 407
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A + L HL K
Sbjct: 218 YMCGECGYRTARRSDLSIHLRTHTGEKPYKCDQCDYSAAQKSNLDSHLTK 267
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTG+KPY C QC + +A + L H+ K
Sbjct: 331 YMCGECGYRAAQKSALSRHMRTHTGDKPYKCDQCDYSTARKSHLDQHIAK 380
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGEKP+ C QC + ++ + L+ HL
Sbjct: 38 YMCGECGYRTAKRSHLAEHVRTHTGEKPFKCDQCDYSASQKSALNQHL 85
Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTG+KPY C QC + +A + L+ HL
Sbjct: 387 YLCDQCGYRTAQKYSLFQHMRTHTGDKPYKCDQCDYSAAQTSALNRHL 434
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KPY CG+C +R+A L H++
Sbjct: 113 MRTHTAEKPYKCDQCDYSAARKCHLDQHLAKHTGDKPYMCGECGYRTAWKYALSLHMR 170
Score = 43.1 bits (100), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGEKPY C QC + +A L+ HL
Sbjct: 443 YMCGECGYRTAYKPTLSIHMRTHTGEKPYKCDQCDYSAARKDNLYQHL 490
Score = 42.4 bits (98), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A L HL K
Sbjct: 150 YMCGECGYRTAWKYALSLHMRTHTGEKPYKCDQCDYSAAQKNTLDQHLAK 199
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHT EKPY C QC + +A L HL K
Sbjct: 94 YMCGECGYRTVQKSHLAEHMRTHTAEKPYKCDQCDYSAARKCHLDQHLAK 143
Score = 39.3 bits (90), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 167 IRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RTHTGEKPY C QC + +A + L HL K
Sbjct: 1 MRTHTGEKPYKCDQCDYSAARKSNLDRHLAK 31
Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 12/70 (17%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY------------ACGQCAFRSA 186
+RT + C CDY + + H+ HTG+KPY CG+C +R+A
Sbjct: 169 MRTHTGEKPYKCDQCDYSAAQKNTLDQHLAKHTGDKPYIRLAKHTGDKPYMCGECGYRTA 228
Query: 187 SVAGLHYHLK 196
+ L HL+
Sbjct: 229 RRSDLSIHLR 238
>gi|260806386|ref|XP_002598065.1| hypothetical protein BRAFLDRAFT_85720 [Branchiostoma floridae]
gi|229283336|gb|EEN54077.1| hypothetical protein BRAFLDRAFT_85720 [Branchiostoma floridae]
Length = 270
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + G + +H THTG+KPY CG+C +R+A + L H++
Sbjct: 10 YKCDQCDYSAAEKGSLATHQATHTGDKPYMCGECGYRAAQKSKLSRHMR 58
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
C CDY + G + ++ THTG+KPY CG+C +R+A + L H++
Sbjct: 200 CDQCDYSAAERGSLATYQATHTGDKPYMCGECGYRAAQKSKLSRHMR 246
Score = 42.4 bits (98), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+R HTGEKPY C QC + ++ + L +H+
Sbjct: 38 YMCGECGYRAAQKSKLSRHMRIHTGEKPYKCDQCDYSASRKSYLKHHM 85
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 148 FVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + ++ H+ HTGEKPY CG+C +R+ + L H++
Sbjct: 66 YKCDQCDYSASRKSYLKHHMAAKHTGEKPYMCGECGYRTVQRSELSIHMR 115
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
++C C Y + + H+RTHTGEKPY C QC + +A
Sbjct: 95 YMCGECGYRTVQRSELSIHMRTHTGEKPYKCDQCDYSAA 133
>gi|260813553|ref|XP_002601482.1| hypothetical protein BRAFLDRAFT_116075 [Branchiostoma floridae]
gi|229286778|gb|EEN57494.1| hypothetical protein BRAFLDRAFT_116075 [Branchiostoma floridae]
Length = 691
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 35/63 (55%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T +RT + C CDY + + ++ HI HTG+KPY CG+C +R+A + L
Sbjct: 542 TLSRHMRTHTGEKPYKCDQCDYSAVQMYTLKQHIAKHTGDKPYMCGECGYRTAQKSDLFQ 601
Query: 194 HLK 196
H+K
Sbjct: 602 HMK 604
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C CDY + + H+ THTGEKPY C QC + +A + LH HL K
Sbjct: 463 LRTHTGDKPYKCDQCDYSAVQKSTLNQHLATHTGEKPYKCDQCDYSAAKKSNLHKHLAK 521
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + H+ HTGEKPY CG+C +R+ + L HL+
Sbjct: 407 MRTHTGEKPYKCDQCDYSAAHKSTLDQHLAKHTGEKPYMCGECGYRAVQKSHLSDHLR 464
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A + L HL K
Sbjct: 388 YMCGECGYRTVQKSHLSEHMRTHTGEKPYKCDQCDYSAAHKSTLDQHLAK 437
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CDY + + + H+ HTG KPY CG+C +R+A L H++
Sbjct: 131 MRTHTGGKPFKCDQCDYSAAHKSILIRHLAMHTGNKPYKCGECGYRTAQKYALSQHMR 188
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT F C CDY + + H+ H G+KPY CG+C +R++ + L H+++
Sbjct: 19 MRTHTGEKPFKCDQCDYSTTQKSNLNQHLSMHAGDKPYMCGECGYRTSWKSALSQHVRR 77
Score = 45.8 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T +RT + C CDY + + H+ HTG+KPY CG+C +R+ + L
Sbjct: 346 TLSRHMRTHTGEKTYKCDQCDYSAARKCSLNQHLAKHTGDKPYMCGECGYRTVQKSHLSE 405
Query: 194 HLK 196
H++
Sbjct: 406 HMR 408
Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KPY CG+C +R+A L H++
Sbjct: 187 MRTHTGDKPYKCDHCDYSAAVKSSLDRHLAIHTGDKPYMCGECGYRTAQKYALSQHMR 244
Score = 45.1 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + + + L H+ K
Sbjct: 528 YMCGECGYRTTQKSTLSRHMRTHTGEKPYKCDQCDYSAVQMYTLKQHIAK 577
Score = 45.1 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CDY + + H+ HTGEKPY CG+C +R++ L H++
Sbjct: 84 FKCDQCDYSAAQKYSLDLHLIKHTGEKPYMCGECGYRTSQKCNLSQHMR 132
Score = 45.1 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 151 YACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
Y CD +Y + H++THTG+KPY CG+C +++A + L H++
Sbjct: 308 YKCDQTAYK-SALSQHMKTHTGDKPYMCGECGYKTARKSTLSRHMR 352
Score = 45.1 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTG+KPY C QC + +A L HL K
Sbjct: 224 YMCGECGYRTAQKYALSQHMRTHTGDKPYKCDQCDYSAAVKCSLDLHLAK 273
Score = 44.3 bits (103), Expect = 0.029, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEK Y C QC + +A L+ HL K
Sbjct: 332 YMCGECGYKTARKSTLSRHMRTHTGEKTYKCDQCDYSAARKCSLNQHLAK 381
Score = 43.5 bits (101), Expect = 0.050, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTG+KPY C QC + + + L+ HL
Sbjct: 444 YMCGECGYRAVQKSHLSDHLRTHTGDKPYKCDQCDYSAVQKSTLNQHL 491
Score = 43.5 bits (101), Expect = 0.050, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 10/75 (13%)
Query: 132 CRTC--KSMIRTDPFRH--------KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
C C ++ ++D F+H + C CDY + + H+ HTG+KPY CG+C
Sbjct: 586 CGECGYRTAQKSDLFQHMKTHTGDKPYKCDQCDYSASRKYSLDLHLAKHTGDKPYMCGEC 645
Query: 182 AFRSASVAGLHYHLK 196
+R+A + L H++
Sbjct: 646 GYRTAHKSDLVKHMR 660
Score = 42.4 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ +TG+KPY CG+C +R+ + L H++
Sbjct: 500 YKCDQCDYSAAKKSNLHKHLAKYTGDKPYMCGECGYRTTQKSTLSRHMR 548
Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HTGEKP+ C QC + +A L HL K
Sbjct: 56 YMCGECGYRTSWKSALSQHVRRHTGEKPFKCDQCDYSAAQKYSLDLHLIK 105
Score = 42.0 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + + H+RTHTGEKPY C +C + + + L H K
Sbjct: 640 YMCGECGYRTAHKSDLVKHMRTHTGEKPYKCDECDYSATKKSALDNHCK 688
Score = 41.6 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H++THTG+KPY C QC + ++ L HL K
Sbjct: 584 YMCGECGYRTAQKSDLFQHMKTHTGDKPYKCDQCDYSASRKYSLDLHLAK 633
Score = 41.2 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+C C Y + + H+RTHTGEKPY C Q A++SA + H
Sbjct: 281 MCGECGYRTTKKSHLADHMRTHTGEKPYKCDQTAYKSALSQHMKTH 326
Score = 40.8 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+C C Y + + H+RTHTGEKP+ C QC + + + L+ HL
Sbjct: 1 MCGECGYRAAWESHLSQHMRTHTGEKPFKCDQCDYSTTQKSNLNQHL 47
Score = 40.8 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C C Y + + H+RTHTG+KPY C C + +A + L HL
Sbjct: 168 YKCGECGYRTAQKYALSQHMRTHTGDKPYKCDHCDYSAAVKSSLDRHL 215
Score = 40.0 bits (92), Expect = 0.48, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KP+ CG+C +R+ + L H++
Sbjct: 243 MRTHTGDKPYKCDQCDYSAAVKCSLDLHLAKHTGDKPHMCGECGYRTTKKSHLADHMR 300
Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTG KP+ C QC + +A + L HL
Sbjct: 112 YMCGECGYRTSQKCNLSQHMRTHTGGKPFKCDQCDYSAAHKSILIRHL 159
>gi|345796721|ref|XP_545343.3| PREDICTED: zinc finger protein 40 [Canis lupus familiaris]
Length = 2798
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 102 IRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH--KFVCYACDYFSYN 159
+ P + +P IY +++ +N +E + C +++ + K++C C+
Sbjct: 428 VSPAHSTQSAPLPIYNSTPVASVVNHSVE--QMCNLLLKDQKPKKQGKYICEYCNRACAK 485
Query: 160 IGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ HIR+HTGE+PY C C F + + L+ H K H
Sbjct: 486 PSVLLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAH 526
Score = 45.1 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 2145 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKTH 2200
>gi|260804455|ref|XP_002597103.1| hypothetical protein BRAFLDRAFT_76366 [Branchiostoma floridae]
gi|229282366|gb|EEN53115.1| hypothetical protein BRAFLDRAFT_76366 [Branchiostoma floridae]
Length = 610
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Query: 119 AVLSTNLNELIEHCRT--------CKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
+T + L EH RT C + ++C C Y + + + H+RTH
Sbjct: 337 GYRATQKSHLFEHMRTHTGEKPYKCDHQTEANTNDKPYICGECGYRAAHKSTLSRHVRTH 396
Query: 171 TGEKPYACGQCAFRSASVAGLHYHLKK 197
TGEKPY C QC F A + L YH K
Sbjct: 397 TGEKPYKCDQCDFSVAKKSDLRYHRTK 423
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 10/108 (9%)
Query: 90 DLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKF 148
DL KT S + + AN T P+ C C + ++L H RT PF++
Sbjct: 3 DLPKASKT-SLVSQQEANTTEKPYMCGEC-GYSTAKKSDLSRHMRT---HTGQKPFKYDL 57
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
CDY + + H+ HTGEKPY CG+C +R+A + L H++
Sbjct: 58 ----CDYSAALKKSLDQHLAKHTGEKPYMCGECGYRTAQKSHLSQHMR 101
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + H+RTHTGEKPY C QC + +A A L+ HLK+
Sbjct: 430 FMCGECGYRTARKSHFFEHMRTHTGEKPYKCDQCDYSAAVKATLNQHLKQ 479
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H++ HTGEKPY CG+C +R+ + L H++
Sbjct: 449 MRTHTGEKPYKCDQCDYSAAVKATLNQHLKQHTGEKPYMCGECGYRATNRCNLSGHMR 506
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 15/109 (13%)
Query: 95 CKTCSYMIR--PNANNTF----SPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHK 147
C C I+ P ++ T +P+ C C +T + L EH +RT
Sbjct: 195 CGECGTKIQFGPTSSQTHWQQCTPYMCGEC-GYRATQKSHLFEH-------MRTHTGEKP 246
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+R H GEKPY CG+C +R+ + L H++
Sbjct: 247 YKCDQCDYSAARKFTLCKHLRQHAGEKPYMCGECGYRATQKSHLSDHMR 295
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + H+RTHTGEKP+ CGQC + +A + L HL++
Sbjct: 137 YMCGECGYRVTRKSHLFEHMRTHTGEKPFKCGQCDYSAARKSTLDKHLRQ 186
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + N + H+RTHTGEKPY C QC + +A + L H
Sbjct: 486 YMCGECGYRATNRCNLSGHMRTHTGEKPYKCDQCEYSAALKSSLKKH 532
Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+R HTG+KPY CG+C +R + L H++
Sbjct: 109 YKCDQCDYSAAQKITLNDHLRQHTGDKPYMCGECGYRVTRKSHLFEHMR 157
Score = 42.7 bits (99), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HTGEKPY C QC + +A L+ HL++
Sbjct: 81 YMCGECGYRTAQKSHLSQHMRIHTGEKPYKCDQCDYSAAQKITLNDHLRQ 130
Score = 42.7 bits (99), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 15/99 (15%)
Query: 114 CIYCKAVLSTNLNELIEH-------CRTCKSMIRTDPFRHK--------FVCYACDYFSY 158
C Y A ST L +H C C + I+ P + ++C C Y +
Sbjct: 170 CDYSAARKSTLDKHLRQHAGEKRYMCGECGTKIQFGPTSSQTHWQQCTPYMCGECGYRAT 229
Query: 159 NIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ H+RTHTGEKPY C QC + +A L HL++
Sbjct: 230 QKSHLFEHMRTHTGEKPYKCDQCDYSAARKFTLCKHLRQ 268
Score = 42.7 bits (99), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C+ CDY + + H+ HTG KPY CG+C +R+ + L H++
Sbjct: 294 MRTHTGEKPFKCHHCDYSAARKFNLDQHLAKHTGCKPYMCGECGYRATQKSHLFEHMR 351
Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKP+ C C + +A L HL K
Sbjct: 275 YMCGECGYRATQKSHLSDHMRTHTGEKPFKCHHCDYSAARKFNLDQHLAK 324
Score = 40.0 bits (92), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Query: 123 TNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
T + L EH +RT F C CDY + + H+R H GEK Y CG+C
Sbjct: 147 TRKSHLFEH-------MRTHTGEKPFKCGQCDYSAARKSTLDKHLRQHAGEKRYMCGECG 199
Query: 183 FR 184
+
Sbjct: 200 TK 201
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 15/64 (23%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYA---------------CGQCAFRSASVAGLH 192
++C C Y + + H+RTHTGEKPY CG+C +R+A + L
Sbjct: 331 YMCGECGYRATQKSHLFEHMRTHTGEKPYKCDHQTEANTNDKPYICGECGYRAAHKSTLS 390
Query: 193 YHLK 196
H++
Sbjct: 391 RHVR 394
Score = 35.8 bits (81), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ 180
++C C Y + + +H+RTHTGEKP+ C Q
Sbjct: 542 YMCGECGYRATQRSVLSNHMRTHTGEKPFKCDQ 574
>gi|260786300|ref|XP_002588196.1| hypothetical protein BRAFLDRAFT_68839 [Branchiostoma floridae]
gi|229273355|gb|EEN44207.1| hypothetical protein BRAFLDRAFT_68839 [Branchiostoma floridae]
Length = 557
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 14/119 (11%)
Query: 79 CKHCHSQLSHLDL-LDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKS 137
C+ C + S LD L+ K ++ + T++ C C+ +TN L +H
Sbjct: 239 CEECSKKFSQLDSNLNKHKNSQHV---DEKKTYT--CGECE-FTTTNGKHLSKH------ 286
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+T P F C CDY + + SH+R HTGEKPY CG+C +R++ L H++
Sbjct: 287 -AKTHPGGKPFKCDQCDYRTTLKDRLNSHMRKHTGEKPYMCGECGYRTSQRGNLVTHMR 344
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 17/145 (11%)
Query: 53 MSLDQILNLNLSVLLVTTIPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSP 112
M Q ++ + T + + C+ C Q S L L IR + P
Sbjct: 73 MRTQQFSEMDSLKKHMRTHTGEKYYRCEECSRQFSQLGNL------KKHIRTHTGE--KP 124
Query: 113 F-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHT 171
+ C C S L +L +H R P+R C C +G ++ H+RTHT
Sbjct: 125 YRCEKCNKQFS-QLGDLKKHIRI---HTGEKPYR----CEECSRQFSELGSLKRHVRTHT 176
Query: 172 GEKPYACGQCAFRSASVAGLHYHLK 196
GE+PY C +C+ + + + L H++
Sbjct: 177 GEQPYRCEECSRQFSELGDLKRHMR 201
Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
Query: 143 PFRHKFVCYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P HK C CD FS+ + ++ H+RTHTGEKPY C +C+ + + + L H++
Sbjct: 23 PRTHK--CSVCDKQFSF-LSKLKRHLRTHTGEKPYRCEECSRQFSELGNLKKHMR 74
Score = 39.7 bits (91), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 19/120 (15%)
Query: 79 CKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
C+ C+ Q S L DL H IR + P+ C C S L L H RT
Sbjct: 127 CEKCNKQFSQLGDLKKH-------IRIHTGE--KPYRCEECSRQFS-ELGSLKRHVRT-- 174
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C C +G ++ H+RTH+GEK Y C +C+ + + + L H++
Sbjct: 175 -HTGEQPYR----CEECSRQFSELGDLKRHMRTHSGEKLYRCEECSKKFSRLDDLKVHMR 229
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C++ + N + H +TH G KP+ C QC +R+ L+ H++K
Sbjct: 268 YTCGECEFTTTNGKHLSKHAKTHPGGKPFKCDQCDYRTTLKDRLNSHMRK 317
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C ACD+ + + +++H+ H+GE Y C QC F +A L H+ K
Sbjct: 412 YKCDACDFSTIHRDSLKAHVAIHSGEGRYKCDQCDFSAAWKTTLDRHMAK 461
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++ C CD+ + + H+ H GEKP+ C +C FR+A L HL
Sbjct: 439 RYKCDQCDFSAAWKTTLDRHMAKHDGEKPFLCEKCGFRTARKCHLRRHL 487
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C + + +R H+ TH+ +KP+ CGQC F +A L H+
Sbjct: 468 FLCEKCGFRTARKCHLRRHLTTHSEDKPHKCGQCDFSTARKNHLDRHM 515
>gi|260780797|ref|XP_002585526.1| hypothetical protein BRAFLDRAFT_89256 [Branchiostoma floridae]
gi|229270522|gb|EEN41537.1| hypothetical protein BRAFLDRAFT_89256 [Branchiostoma floridae]
Length = 818
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 16/112 (14%)
Query: 95 CKTCSYMIRPNA--------NNTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFR 145
C C Y R ++ + P+ C C +T + LI+H R + +
Sbjct: 128 CDECGYRTRESSALSIHKRTHTGEKPYKCDQCD-FAATQASHLIKHVRVKHNGEKP---- 182
Query: 146 HKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
FVC CDY++ + + +H+RTHTGE+PY C QC + ++ + H+ K
Sbjct: 183 --FVCNECDYWTADKATLTNHMRTHTGERPYKCDQCDYSASGKGQFNKHMTK 232
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F+C C Y + + SH+RTHTGEKPY C QC F +A + L H++
Sbjct: 295 FLCSECGYRARESSSLSSHMRTHTGEKPYKCDQCDFSAAQSSLLKKHVR 343
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRT----CKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRT 169
C Y +T LN + +H C +RT + ++C C + + + + H RT
Sbjct: 709 CGYWTDNRTTFLNHMRKHTGERPYKCNQHMRTHTGKKPYMCGECGFRTAHSATLSRHQRT 768
Query: 170 HTGEKPYACGQCAFRSASVAGLHYHLKK 197
HTG++PY CG+C +R+A YHL +
Sbjct: 769 HTGDRPYVCGECGYRAAEK----YHLSR 792
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + SH+RTHTGEKPY C QC F +A L H++
Sbjct: 647 YLCNECGYRARESSSLSSHMRTHTGEKPYKCDQCDFSAAQSTSLKTHVR 695
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 30/53 (56%), Gaps = 6/53 (11%)
Query: 148 FVCYACDY---FSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
FVC C Y FSY + H RTHTGEKPY CG C +R+A + H +K
Sbjct: 464 FVCEVCGYGTDFSYEL---TQHKRTHTGEKPYLCGDCGYRTAHRSSFTRHQRK 513
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
FVC C Y + + H THTGEKPY CG+C FR+A L H +K
Sbjct: 408 FVCEECGYKTAASTSLTRHKMTHTGEKPYMCGECGFRTAHKCALTRHKRK 457
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
FVC C Y + G H R HTGEKPY C +C +R+A + L H +K
Sbjct: 239 FVCDECGYRTAYSGSFTEHKRMHTGEKPYLCEECGYRTAHKSTLTRHKRK 288
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 15/77 (19%)
Query: 136 KSMIRTDPFRHK-FVCYACDYFSYNIGCMRSHIR--------------THTGEKPYACGQ 180
K+ +R + K FVC C Y + N + +H+R THTGEKPY C +
Sbjct: 564 KNHVRVKHYGEKPFVCNECGYGTTNKTTLSNHMRKHTVFSAALTQHKRTHTGEKPYLCEE 623
Query: 181 CAFRSASVAGLHYHLKK 197
C FR+AS A L H +K
Sbjct: 624 CGFRTASQASLTKHKRK 640
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C+Y++ N +H+R HTGE+PY C QC + ++ + H+ K
Sbjct: 352 FMCNECEYWTDNRTNFLTHLRKHTGERPYKCDQCDYAASEKGQFNRHMTK 401
Score = 42.7 bits (99), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F+C C Y + + H RTHTGEKPY C QC F + + L H++
Sbjct: 126 FLCDECGYRTRESSALSIHKRTHTGEKPYKCDQCDFAATQASHLIKHVR 174
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RT ++C C + + + + H R HTGEKPY C +C +R+ + L H++
Sbjct: 611 RTHTGEKPYLCEECGFRTASQASLTKHKRKHTGEKPYLCNECGYRARESSSLSSHMR 667
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 15/64 (23%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGE---------------KPYACGQCAFRSASVAGLH 192
F C C Y++ N +H+R HTGE KPY CG+C FR+A A L
Sbjct: 704 FECNECGYWTDNRTTFLNHMRKHTGERPYKCNQHMRTHTGKKPYMCGECGFRTAHSATLS 763
Query: 193 YHLK 196
H +
Sbjct: 764 RHQR 767
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + + H R HTGEKP+ C +C +R+ + L H++
Sbjct: 267 YLCEECGYRTAHKSTLTRHKRKHTGEKPFLCSECGYRARESSSLSSHMR 315
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H RTHTGEKPY C QC + +A + L H++
Sbjct: 520 YLCDECGYRARESSYLSIHKRTHTGEKPYKCDQCDYSAAQLPCLKNHVR 568
Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 167 IRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+R HTGEKPY CG+C +R+ + + L H+K+
Sbjct: 1 MRKHTGEKPYMCGECGYRTVAKSHLTRHMKR 31
Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C++ + + + H RTHT EK Y CG+C +R+A + H +K
Sbjct: 70 YACKLCEFKTADKETLSEHKRTHTEEKAYLCGECGYRTAHSSSFTRHKRK 119
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RT ++C C Y + + H R HTGEKP+ C +C +R+ + L H +
Sbjct: 90 RTHTEEKAYLCGECGYRTAHSSSFTRHKRKHTGEKPFLCDECGYRTRESSALSIHKR 146
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RT ++C C Y + + H R HTGEKPY C +C +R+ + L H +
Sbjct: 484 RTHTGEKPYLCGDCGYRTAHRSSFTRHQRKHTGEKPYLCDECGYRARESSYLSIHKR 540
Score = 37.0 bits (84), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+ C CDY + G H+ HTG+ P+ C +C +++A+ L H
Sbjct: 380 YKCDQCDYAASEKGQFNRHMTKHTGKMPFVCEECGYKTAASTSLTRH 426
>gi|344306973|ref|XP_003422157.1| PREDICTED: zinc finger protein 14-like, partial [Loxodonta
africana]
Length = 982
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 131 HCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAG 190
H + + RT F C+ C + +++H+RTHTGEKP+ CGQC R ++ +
Sbjct: 105 HLSSLRRHARTHTGESPFACHQCGSAFCHQSSLKTHVRTHTGEKPFTCGQCGQRFSTSSY 164
Query: 191 LHYH 194
L H
Sbjct: 165 LRVH 168
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 43/143 (30%), Positives = 58/143 (40%), Gaps = 20/143 (13%)
Query: 65 VLLVTTIPTQN------HSLCKHCHSQLSHLDLLDHCKTCSYM--IRPNA--NNTFSPF- 113
V L T PT N HS C+ C HL L + K ++ +R +A + SPF
Sbjct: 65 VSLGLTWPTGNPPGEKPHS-CEECGKGFRHLSLEECGKGFRHLSSLRRHARTHTGESPFA 123
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C C + H + K+ +RT F C C +R H RTHTGE
Sbjct: 124 CHQCGSAFC--------HQSSLKTHVRTHTGEKPFTCGQCGQRFSTSSYLRVHQRTHTGE 175
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
K Y CG C + L H++
Sbjct: 176 KRYPCGDCGRAFGHPSNLRRHVR 198
Score = 44.7 bits (104), Expect = 0.024, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 143 PFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+ K+ A ++S ++ H RTHTGEKPY C QC S + LH H K
Sbjct: 261 PYECKYCWRAFSFYS----SLQEHERTHTGEKPYKCKQCGKAFTSYSALHGHEK 310
Score = 44.3 bits (103), Expect = 0.029, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 50/140 (35%), Gaps = 31/140 (22%)
Query: 79 CKHC------------HSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLN 126
CK C H + + + CK C + AN + + T+
Sbjct: 320 CKQCGKSFRCPKYFRQHVNMHSGEKIYECKECGKVYSMPAN---------LRQHMKTHSG 370
Query: 127 ELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY 176
E C+ C ++ +RT + C C + ++ H+R HTGEKPY
Sbjct: 371 ERPYECKQCGKTFRWPTSLRNHMRTHSSEKPYECKQCGKAYKCLISLQEHLRKHTGEKPY 430
Query: 177 ACGQCAFRSASVAGLHYHLK 196
C QC S LH H K
Sbjct: 431 ECKQCGRAFTSYPALHGHEK 450
Score = 42.0 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 10/92 (10%)
Query: 116 YCKAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRS 165
Y + ++ + E I C+ C + ++T + C C +R+
Sbjct: 332 YFRQHVNMHSGEKIYECKECGKVYSMPANLRQHMKTHSGERPYECKQCGKTFRWPTSLRN 391
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
H+RTH+ EKPY C QC + L HL+K
Sbjct: 392 HMRTHSSEKPYECKQCGKAYKCLISLQEHLRK 423
Score = 41.6 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ ++T + C C +R+H+RTH+ EKPY C QC + L HL
Sbjct: 502 RQHMKTHSVERPYECKQCGKTFRWPTSLRNHMRTHSSEKPYECKQCGKAYKCLISLQEHL 561
Query: 196 KK 197
+K
Sbjct: 562 RK 563
Score = 35.8 bits (81), Expect = 9.3, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
+ ++ +RT + C C + ++ H+R HTG+KPY C C
Sbjct: 528 SLRNHMRTHSSEKPYECKQCGKAYKCLISLQEHLRKHTGDKPYECNHCG 576
>gi|260801905|ref|XP_002595835.1| hypothetical protein BRAFLDRAFT_232865 [Branchiostoma floridae]
gi|229281084|gb|EEN51847.1| hypothetical protein BRAFLDRAFT_232865 [Branchiostoma floridae]
Length = 370
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 27/38 (71%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
F C C Y S+N C+ H++THTGEKP+AC QC +RS
Sbjct: 143 FACDQCTYKSHNKYCLSDHMKTHTGEKPHACDQCDYRS 180
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C +CD+ + + +++H++THTGEKPY C C RSA A L H+K
Sbjct: 30 FSCKSCDFKTAHKKSLQTHMKTHTGEKPYMCEVCGHRSALAASLRTHMK 78
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C +CD+ + + + H++THTGEKPY C C R+A A L H+K
Sbjct: 196 FSCKSCDFKTAHKTAFKYHMKTHTGEKPYMCEVCGHRAAQAASLRKHMK 244
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 151 YACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ACD Y +R H R HTGEKP++C C F++A YH+K
Sbjct: 171 HACDQCDYRSTRLREHTRIHTGEKPFSCKSCDFKTAHKTAFKYHMK 216
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C Y S+N + H++THTGEKP+AC QC +R+ L H++
Sbjct: 309 FACDQCTYKSHNKYHLIDHMKTHTGEKPHACDQCDYRTFDFKTLKEHMR 357
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Query: 111 SPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRT 169
PF C C S N LI+H ++T C CDY +++ ++ H+R
Sbjct: 307 KPFACDQC-TYKSHNKYHLIDH-------MKTHTGEKPHACDQCDYRTFDFKTLKEHMRV 358
Query: 170 HTGEKPYACGQC 181
HTGEKPYAC +C
Sbjct: 359 HTGEKPYACDKC 370
>gi|260810839|ref|XP_002600130.1| hypothetical protein BRAFLDRAFT_204295 [Branchiostoma floridae]
gi|229285416|gb|EEN56142.1| hypothetical protein BRAFLDRAFT_204295 [Branchiostoma floridae]
Length = 288
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT C CDY + N C+ H+ HTGEKPYAC C+FR+A+ GL H+++
Sbjct: 133 LRTHTGEKPHKCDQCDYSASNKRCLDLHMAKHTGEKPYACQLCSFRTANKQGLALHVRR 191
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 143 PFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
P+ +C C Y + + H+R HTGEKPY C QC + SA +GL+ H+
Sbjct: 197 PYHSPNICKECGYKAAYKKDLDKHMRIHTGEKPYKCDQCDYSSAQKSGLNRHI 249
Score = 36.2 bits (82), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYA----CGQCAFRSASVAGLHYHLK 196
+ C C + + N + H+R HTGEKPY C +C +++A L H++
Sbjct: 170 YACQLCSFRTANKQGLALHVRRHTGEKPYHSPNICKECGYKAAYKKDLDKHMR 222
>gi|18539217|emb|CAD22532.1| enhancer binding protein [Paracentrotus lividus]
Length = 939
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 48/111 (43%), Gaps = 16/111 (14%)
Query: 95 CKTCSYMIRP-----NANNTFS---PF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFR 145
C C + R N NT S P+ C C T+ EL H + + T
Sbjct: 475 CHLCGRIFRTSTLLRNHENTHSGTKPYKCELCPKAFGTS-GELGRHMK----YMHTHEKP 529
Query: 146 HKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
HK C CDY S ++ H+R+HTGEKPY C C + S L H++
Sbjct: 530 HK--CPLCDYLSVEASKIKRHMRSHTGEKPYKCTLCEYCSTDNYKLKRHMR 578
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 13/83 (15%)
Query: 112 PFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHT 171
P C Y LS +++ H R S P++ C C+Y S + ++ H+R HT
Sbjct: 533 PLCDY----LSVEASKIKRHMR---SHTGEKPYK----CTLCEYCSTDNYKLKRHMRVHT 581
Query: 172 GEKPYACGQC--AFRSASVAGLH 192
GE+P++C QC AF S H
Sbjct: 582 GERPFSCSQCDQAFSQKSSLKEH 604
>gi|291413278|ref|XP_002722903.1| PREDICTED: rCG31912-like [Oryctolagus cuniculus]
Length = 935
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 55/120 (45%), Gaps = 17/120 (14%)
Query: 78 LCKHCHSQ-LSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCK 136
+CK C ++H L H +T +PN C C +T + +L EH
Sbjct: 655 VCKDCGKAFIAHSGLSQHLRT-HTGEKPNE-------CKQCAKAFTT-VPQLNEH----- 700
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
I+T F C C + N C+++H R HTGEKPY C +C A+ +GL HL+
Sbjct: 701 --IKTHTCEKPFQCMVCAKYFRNSSCLQTHFRIHTGEKPYECKECGKDFAARSGLTVHLR 758
Score = 42.4 bits (98), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 34/85 (40%), Gaps = 10/85 (11%)
Query: 121 LSTNLNELIEHCRTCKSM----------IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
L T+ E C+ C I+T FVC C N C+++H R H
Sbjct: 477 LRTHTGEKPYECKECDKAFTSFALLNEHIKTHTGEKPFVCNVCTKSFRNSSCLKTHFRIH 536
Query: 171 TGEKPYACGQCAFRSASVAGLHYHL 195
TG KPY C C + AG H+
Sbjct: 537 TGIKPYQCKDCGKAFSGRAGFTKHV 561
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 17/111 (15%)
Query: 95 CKTCSYMIRPNANNTF--------SPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFR 145
CK C R ++ T PF C C ++ + + L+ H +RT
Sbjct: 572 CKECGKTFRTSSGLTEHVRIHTGEKPFECYQCGKAMA-HSSSLVAH-------LRTHTGE 623
Query: 146 HKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C+ + +R H+R+HTGEKPY C C + +GL HL+
Sbjct: 624 KPFECNMCEKAFTSSSYLRVHMRSHTGEKPYVCKDCGKAFIAHSGLSQHLR 674
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 13/104 (12%)
Query: 104 PNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM----------IRTDPFRHKFVCYAC 153
P F+ C Y + + T+ E C+ C +RT + C C
Sbjct: 433 PTCGKAFTRSC-YLRVHMRTHTGEKPYECQECGKAFTGRSWLTIHLRTHTGEKPYECKEC 491
Query: 154 DYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHL 195
D + + HI+THTGEKP+ C C +FR++S H+ +
Sbjct: 492 DKAFTSFALLNEHIKTHTGEKPFVCNVCTKSFRNSSCLKTHFRI 535
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 28/61 (45%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKT 198
+RT +VC C + H+RTHTGEKPY C +C S + L H K
Sbjct: 869 MRTHTGEKPYVCKVCGKAFTERSGLSKHLRTHTGEKPYDCTECGKTFTSYSDLSEHKKSH 928
Query: 199 Y 199
+
Sbjct: 929 W 929
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C + H+RTHTGEKPY C +C S A L+ H+K
Sbjct: 449 MRTHTGEKPYECQECGKAFTGRSWLTIHLRTHTGEKPYECKECDKAFTSFALLNEHIK 506
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 21/34 (61%)
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+R H+RTHTGEKPY C C +GL HL+
Sbjct: 865 LRIHMRTHTGEKPYVCKVCGKAFTERSGLSKHLR 898
Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 10/72 (13%)
Query: 121 LSTNLNELIEHCRTCKSM----------IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
+ +N E + C+ C +R+ + CY C + + +H+RTH
Sbjct: 365 VQSNTGEKLYECKECGKAFITSSRLSEHLRSHTGEKPYGCYECGKAFASSSYLTAHLRTH 424
Query: 171 TGEKPYACGQCA 182
TGEKP+ C C
Sbjct: 425 TGEKPFVCPTCG 436
Score = 36.6 bits (83), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ H+R+HTGEKPY C +C AS + L HL+
Sbjct: 389 LSEHLRSHTGEKPYGCYECGKAFASSSYLTAHLR 422
Score = 36.2 bits (82), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+R+ + + C C + +H+R+H GEKP+ C QC AS + + HLK
Sbjct: 757 LRSHTGENSYDCKQCGKAFITSSSLIAHMRSHRGEKPFQCDQCGKAFASSSYFNAHLK 814
>gi|357627141|gb|EHJ76928.1| hypothetical protein KGM_21483 [Danaus plexippus]
Length = 590
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C C A L+T + L +H R+ +R P +C+AC + +H+RTHTGE
Sbjct: 501 CEECGASLATRAS-LHKHARSVHRGLRPPP---SHICHACGKLFRARSTLVNHVRTHTGE 556
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
KPY C C R A + H+K
Sbjct: 557 KPYPCEDCGRRFAQRTAMRTHVK 579
>gi|260787889|ref|XP_002588984.1| hypothetical protein BRAFLDRAFT_89175 [Branchiostoma floridae]
gi|229274156|gb|EEN44995.1| hypothetical protein BRAFLDRAFT_89175 [Branchiostoma floridae]
Length = 499
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 11/98 (11%)
Query: 99 SYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSY 158
S + +P AN P+ +Y + T N+ +RT ++ C CDY +
Sbjct: 199 SAVSQPEANTGEKPY-MYGECGYRTTHNQ----------HMRTHTGEKRYKCDQCDYSAK 247
Query: 159 NIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ H HTG+KPY CG+C +R+A + L H++
Sbjct: 248 RQSSLDQHEAKHTGQKPYMCGECGYRTAQKSDLSTHMR 285
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CDY + + H+ HTG+KPY CG+C +R+A + L H++
Sbjct: 340 MRTHTREKSFKCGQCDYSTSRKDSLDQHLAKHTGDKPYMCGECGYRAARKSTLSKHMR 397
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTG+KPY C QC + +A + L HL K
Sbjct: 433 YICGECGYRTVRKSDLSQHMRTHTGDKPYKCDQCDYSAAHKSSLDQHLAK 482
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KPY CG+C +R+ + L H++
Sbjct: 396 MRTHTGEKPYKCDQCDYSASRKDSLDQHLAIHTGDKPYICGECGYRTVRKSDLSQHMR 453
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGEKPY C QC + ++ L HL
Sbjct: 377 YMCGECGYRAARKSTLSKHMRTHTGEKPYKCDQCDYSASRKDSLDQHL 424
Score = 42.7 bits (99), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTG+KPY CG+C +R+A + L H++
Sbjct: 293 YRCDQCDYSATRKCHLDQHLAIHTGDKPYICGECEYRTAWESQLSRHMR 341
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
+RT + C CDY + + + H+ HTG+KPY CG+C +
Sbjct: 452 MRTHTGDKPYKCDQCDYSAAHKSSLDQHLAKHTGQKPYMCGECGW 496
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + +H+R HTGEKPY C QC + + L HL
Sbjct: 265 YMCGECGYRTAQKSDLSTHMRIHTGEKPYRCDQCDYSATRKCHLDQHL 312
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C+Y + + H+RTHT EK + CGQC + ++ L HL K
Sbjct: 321 YICGECEYRTAWESQLSRHMRTHTREKSFKCGQCDYSTSRKDSLDQHLAK 370
>gi|260795617|ref|XP_002592801.1| hypothetical protein BRAFLDRAFT_149454 [Branchiostoma floridae]
gi|229278025|gb|EEN48812.1| hypothetical protein BRAFLDRAFT_149454 [Branchiostoma floridae]
Length = 232
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 11/100 (11%)
Query: 107 NNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYF 156
N F C KA + T+ E C C KS +RT + C C
Sbjct: 12 NKQFGKLCNL-KAHMRTHTGEKPYKCEECSRQFSQLGALKSHMRTHTGEKPYTCEECSRQ 70
Query: 157 SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+G ++SH+RTHTGEKPY C +C+ + + L H++
Sbjct: 71 FSQLGALKSHVRTHTGEKPYKCEECSRQFSQPGHLEEHMR 110
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C +G ++ H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 162 KAHMRTHTGEKPYKCEECSRHFSELGDLKKHMRTHTGEKPYRCEECSRQFSELGSLKTHM 221
Query: 196 K 196
+
Sbjct: 222 R 222
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C Q S L L S+M ++ C C S L L KS
Sbjct: 36 CEECSRQFSQLGALK-----SHMRTHTGEKPYT--CEECSRQFS-QLGAL-------KSH 80
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C G + H+RTHTGEKPY C +C+ + + + L+ H++
Sbjct: 81 VRTHTGEKPYKCEECSRQFSQPGHLEEHMRTHTGEKPYRCEECSRQFSKLGNLNAHMR 138
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+F C C+ + +++H+RTHTGEKPY C +C+ + + + L H++
Sbjct: 5 RFRCEECNKQFGKLCNLKAHMRTHTGEKPYKCEECSRQFSQLGALKSHMR 54
Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 10/71 (14%)
Query: 118 KAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHI 167
KA + T+ E C C K +RT + C C +G +++H+
Sbjct: 162 KAHMRTHTGEKPYKCEECSRHFSELGDLKKHMRTHTGEKPYRCEECSRQFSELGSLKTHM 221
Query: 168 RTHTGEKPYAC 178
RTHTGEKPY C
Sbjct: 222 RTHTGEKPYKC 232
>gi|260832650|ref|XP_002611270.1| hypothetical protein BRAFLDRAFT_73333 [Branchiostoma floridae]
gi|229296641|gb|EEN67280.1| hypothetical protein BRAFLDRAFT_73333 [Branchiostoma floridae]
Length = 744
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 30/51 (58%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+FVC CDY + + + H RTHTGEKPY C QC + +A L HL K
Sbjct: 73 RFVCTECDYRTASKANLVKHTRTHTGEKPYKCEQCDYSAAQKGTLDLHLTK 123
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C C ++ N L++H RT P++ C CDY + G + H+ HTGE
Sbjct: 76 CTECDYRTASKAN-LVKHTRT---HTGEKPYK----CEQCDYSAAQKGTLDLHLTKHTGE 127
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
KP+ CGQC +R+A+ + L H++
Sbjct: 128 KPFMCGQCGYRTANRSYLSVHMR 150
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+R+ + C C+Y + G + SH THTGEKPY CG+C +R+A + L HL+
Sbjct: 334 MRSHTGEKPYKCDQCNYSAAQKGDLNSHKTTHTGEKPYMCGECGYRTAIRSNLTVHLR 391
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + H+ HTGEKPY CG+C +R+A + L H+K+
Sbjct: 496 YKCEQCDYSAAQKCALDRHMTKHTGEKPYMCGECGYRTAYMDALTVHMKR 545
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKPY CG+C FR+A+ L H++
Sbjct: 287 YKCGQCDYSAAQKCTLDRHLTKHTGEKPYMCGECGFRTAARYSLTVHMR 335
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C + + G + H+ HTGEKPY CG+C FR+A+ L H++
Sbjct: 552 FKCDQCTFSAVAKGELDQHMTKHTGEKPYMCGECGFRTAARYSLTLHMR 600
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C CD+ + + H+ THTGEKP+ CG+C +R+A L H+
Sbjct: 664 YKCDQCDFSAKKKSGLDQHMATHTGEKPFMCGECGYRTAQRCHLSRHM 711
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C CDY + + H HTGEKP+ CG+C +R+A L H+
Sbjct: 399 YKCDQCDYSATRKSGLDKHKAKHTGEKPFMCGECGYRTAQRCHLSRHM 446
Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+FVC C Y + + + H+R HTG KPY C QC F + +GL H+
Sbjct: 635 RFVCVECGYRTAHRCNLTVHLRIHTGVKPYKCDQCDFSAKKKSGLDQHM 683
Score = 42.7 bits (99), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 154 DYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
DY + + + H R HTGEKPY CGQC + +A L HL K
Sbjct: 265 DYSTASKAKLVRHTRKHTGEKPYKCGQCDYSAAQKCTLDRHLTK 308
Score = 40.4 bits (93), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C + + + H+R+HTGEKPY C QC + +A L+ H
Sbjct: 315 YMCGECGFRTAARYSLTVHMRSHTGEKPYKCDQCNYSAAQKGDLNSH 361
Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H+R+HTG+KPY C QC + + A L H+ K
Sbjct: 580 YMCGECGFRTAARYSLTLHMRSHTGDKPYKCDQCNYSATQKANLDSHMAK 629
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HTG KPY C QC + + +GL H K
Sbjct: 371 YMCGECGYRTAIRSNLTVHLRIHTGAKPYKCDQCDYSATRKSGLDKHKAK 420
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 19/32 (59%)
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
H R HTGEKPY C QC + +A L H+ K
Sbjct: 486 HTRKHTGEKPYKCEQCDYSAAQKCALDRHMTK 517
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
F+C C Y + N + H+R+HTG KPY C C + +A L H
Sbjct: 130 FMCGQCGYRTANRSYLSVHMRSHTGVKPYKCDLCDYSAAQKGHLDDH 176
Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + H+ THTGEK Y C QC + L HL+K
Sbjct: 692 FMCGECGYRTAQRCHLSRHMTTHTGEKSYKCDQCDYSVTDKRHLKKHLEK 741
Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C+Y + + SH+ HTGEK + C +C +R+A L HL+
Sbjct: 608 YKCDQCNYSATQKANLDSHMAKHTGEKRFVCVECGYRTAHRCNLTVHLR 656
>gi|432953255|ref|XP_004085322.1| PREDICTED: zinc finger protein 37-like, partial [Oryzias latipes]
Length = 243
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 55/120 (45%), Gaps = 19/120 (15%)
Query: 79 CKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
CK C + SH+ DL H IR + PF C CK S + L H
Sbjct: 104 CKECDRRFSHVSDLKKH-------IRTHTGE--RPFSCKECKKQFS-QTSSLQRH----- 148
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+R F C CD + ++ H+RTHTGEKP++C +C R +SV+ L H++
Sbjct: 149 --MRIHTGEKPFSCKECDKSFSCLSTLKKHVRTHTGEKPFSCKECVKRFSSVSNLKKHMR 206
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 60/144 (41%), Gaps = 29/144 (20%)
Query: 74 QNHSLCKHCHSQLSHL-DLLDH-----------CKTCSYMIRPNANNTF--------SPF 113
+ H C C+ SH+ DL H CK C +N T PF
Sbjct: 15 EKHFSCVECNKGFSHVSDLKKHIRTHTGEKPFSCKECDKRFSCGSNLTTHMRIHTGEKPF 74
Query: 114 -CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTG 172
C C + S L+ LI H +R F C CD ++ ++ HIRTHTG
Sbjct: 75 SCTECGKIFSC-LSNLITH-------MRIHTGEKPFSCKECDRRFSHVSDLKKHIRTHTG 126
Query: 173 EKPYACGQCAFRSASVAGLHYHLK 196
E+P++C +C + + + L H++
Sbjct: 127 ERPFSCKECKKQFSQTSSLQRHMR 150
Score = 42.7 bits (99), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++ +R+ F C C+ ++ ++ HIRTHTGEKP++C +C R + + L H+
Sbjct: 6 RTHLRSHTGEKHFSCVECNKGFSHVSDLKKHIRTHTGEKPFSCKECDKRFSCGSNLTTHM 65
Query: 196 K 196
+
Sbjct: 66 R 66
>gi|260823118|ref|XP_002604030.1| hypothetical protein BRAFLDRAFT_71680 [Branchiostoma floridae]
gi|229289355|gb|EEN60041.1| hypothetical protein BRAFLDRAFT_71680 [Branchiostoma floridae]
Length = 440
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 66/156 (42%), Gaps = 38/156 (24%)
Query: 79 CKHCHSQLSHLD--LLDH-------CKTCSYMIRPNAN--------NTFSPF----CIYC 117
C + +Q HLD L+ H C+ C Y N P+ C Y
Sbjct: 194 CDYSAAQKGHLDQHLMKHSDEKPYMCEECGYRTTQKVNLSRHIRTHTREKPYKCDQCDYS 253
Query: 118 KAVLSTNLNELIEH-------CRTC--KSMIRTDPFRH--------KFVCYACDYFSYNI 160
A +S L +H C C ++ ++D ++H + C CDY + +
Sbjct: 254 TAWISALNQHLAKHTGDKPYMCGECGYRTAQKSDLYKHIVTHTEEKPYKCDQCDYSAAHK 313
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ H+R HTG+KPY CG+C +R+A + L H++
Sbjct: 314 SYLNRHLRKHTGDKPYTCGECGYRAADRSHLSRHMR 349
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+RTHTGEKPY C QC + SA + L+ H++
Sbjct: 385 YMCGECGYRAAQRSALSQHMRTHTGEKPYKCDQCDYYSAKKSSLNRHIR 433
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + H+RTHTGEKPY C QC + +A L HL K
Sbjct: 161 FMCGECGYRTDRKSHLSRHMRTHTGEKPYKCDQCDYSAAQKGHLDQHLMK 210
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + HIRTHT EKPY C QC + +A ++ L+ HL K
Sbjct: 217 YMCEECGYRTTQKVNLSRHIRTHTREKPYKCDQCDYSTAWISALNQHLAK 266
Score = 42.7 bits (99), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H H+GEKPY CG+C +R+A + L H++
Sbjct: 357 YKCDQCDYSAAVKHHLIDHQTRHSGEKPYMCGECGYRAAQRSALSQHMR 405
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + G + H+ H+ EKPY C +C +R+ L H++
Sbjct: 180 MRTHTGEKPYKCDQCDYSAAQKGHLDQHLMKHSDEKPYMCEECGYRTTQKVNLSRHIR 237
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
+ C C Y + + + H+R HTGEKPY C QC + +A
Sbjct: 329 YTCGECGYRAADRSHLSRHMRIHTGEKPYKCDQCDYSAA 367
Score = 40.4 bits (93), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 153 CDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
CDY + + H+ HTGEKPY CG+C +R+A L H++
Sbjct: 33 CDYSAVQKCDLVRHLTKHTGEKPYICGECGYRTALKCNLSRHMR 76
>gi|260823044|ref|XP_002603993.1| hypothetical protein BRAFLDRAFT_71718 [Branchiostoma floridae]
gi|229289318|gb|EEN60004.1| hypothetical protein BRAFLDRAFT_71718 [Branchiostoma floridae]
Length = 540
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+R HTG+KPY CG+C +R+A + L H++
Sbjct: 392 MRTHTGEKPYKCDQCDYSAAQKSTLDQHLRKHTGDKPYMCGECGYRTAQKSNLSTHMR 449
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + G + H+ HTGE+P+ CG+C +RSA + L H++
Sbjct: 223 MRTHTGERPYKCDKCDYSAAQKGDLDKHLVKHTGEQPFICGECGYRSAQKSNLSTHMR 280
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+RTHTGEKPY C QC + +A + L HL+K
Sbjct: 373 YICGECGYRAVHKSDLSKHMRTHTGEKPYKCDQCDYSAAQKSTLDQHLRK 422
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F+C C Y S + +H+RTH G+KPY C QC +R+A + L H++
Sbjct: 260 FICGECGYRSAQKSNLSTHMRTHRGDKPYKCDQCGYRTAWKSHLSQHMR 308
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + + C CDY + H+ HT EKPY CG+C +R+A + L H+K
Sbjct: 448 MRTHTGKKSYKCNQCDYAAARKSTWDIHLAKHTDEKPYMCGECGYRAAQRSNLSRHMK 505
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C Y + + + H+R HTGE+PY C QC F +A LH H+
Sbjct: 84 FMCGECGYRTVQMSDLTKHMRIHTGERPYKCDQCDFSAAQNYSLHSHM 131
Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGE+PY C +C + +A L HL K
Sbjct: 204 YMCGGCGYRTIYRSHLSRHMRTHTGERPYKCDKCDYSAAQKGDLDKHLVK 253
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 12/84 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSH-IRTHTG 172
C Y A ST +I+H P++ C CDY + + +H + H+G
Sbjct: 321 CDYSAAQKSTFDQHVIKH-------SGEKPYK----CDQCDYSAAQKSTLDNHTVAKHSG 369
Query: 173 EKPYACGQCAFRSASVAGLHYHLK 196
EKPY CG+C +R+ + L H++
Sbjct: 370 EKPYICGECGYRAVHKSDLSKHMR 393
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H++THT +KPY C QC + +A + L+ H+++
Sbjct: 485 YMCGECGYRAAQRSNLSRHMKTHTADKPYKCDQCDYSAAQKSTLNKHVRR 534
Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+RT + C CDY + H+ H+GEKPY C QC + +A + L H
Sbjct: 307 MRTHTGEKPYKCDQCDYSAAQKSTFDQHVIKHSGEKPYKCDQCDYSAAQKSTLDNH 362
Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + + H+RTHTGEKPY C C F ++ + L H+
Sbjct: 147 YICAECGYRATHKCTLAYHMRTHTGEKPYNCDHCDFSTSHKSNLDRHI 194
Score = 40.0 bits (92), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + +H+RTHTG+K Y C QC + +A + HL K
Sbjct: 429 YMCGECGYRTAQKSNLSTHMRTHTGKKSYKCNQCDYAAARKSTWDIHLAK 478
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G M S + HTGEKP+ CG+C +R+ ++ L H++
Sbjct: 69 GDMGSRVVKHTGEKPFMCGECGYRTVQMSDLTKHMR 104
>gi|260808213|ref|XP_002598902.1| hypothetical protein BRAFLDRAFT_107338 [Branchiostoma floridae]
gi|229284177|gb|EEN54914.1| hypothetical protein BRAFLDRAFT_107338 [Branchiostoma floridae]
Length = 1141
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + +H+ HTGEKPY CG+C FRSA + L H+K
Sbjct: 910 MRTHTGEKPYKCDQCDYSAAQKSNLDNHLVKHTGEKPYMCGECGFRSAGRSTLSRHMK 967
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + C+ CDY + + H+R HTGEKPY CG+C FR+A + L H+
Sbjct: 85 MRTHTGEKPYKCHLCDYSAAQKTPLDVHLRKHTGEKPYMCGECGFRTAQKSTLSKHI 141
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+RTHTGEKPY C QC + +A + L YHL K
Sbjct: 835 YMCGECGYRTTHKSALSKHMRTHTGEKPYKCDQCDYSAAQKSHLDYHLTK 884
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + HI HTG+KPY CG+C +R+A A L H+K
Sbjct: 574 MRTHTGEKPYRCDQCDYSAAEKSTLDDHITKHTGQKPYMCGECGYRTALRANLSRHMK 631
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 11/79 (13%)
Query: 126 NELIEHCRTCKSMIRTDPFRH--------KFVCYACDYFSYNIGCMRSHIRTHTGEKPYA 177
+ L EH RT P++H + C CDY + + H+ HTGEKPY
Sbjct: 219 DTLSEHMRT---HTGEKPYKHMRTHTSEKPYKCDQCDYSAARKSTLDDHMIKHTGEKPYM 275
Query: 178 CGQCAFRSASVAGLHYHLK 196
CG+C FR+A + L H++
Sbjct: 276 CGECGFRTARKSDLSKHMR 294
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 22/120 (18%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYC--KAVLSTNLNELIEHCRTCK 136
C + ++ SHLDL ++ R + C C +A +NL+ R K
Sbjct: 700 CDYSAARKSHLDL--------HLARHTGEKPY--MCDECGYRAAHKSNLS------RHMK 743
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ PF+ C CDY + + H+ HTGEKPY CG+C +R+ + L H++
Sbjct: 744 THTGEKPFK----CDQCDYSATRKSTLYQHVEKHTGEKPYMCGECGYRTNQKSTLSIHMR 799
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY CG+C +R+ + L H++
Sbjct: 854 MRTHTGEKPYKCDQCDYSAAQKSHLDYHLTKHTGEKPYNCGECGYRTTHKSALSKHMR 911
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C Y + + + H+RTHTGEKPY C QC + +A + L HL K
Sbjct: 891 YNCGECGYRTTHKSALSKHMRTHTGEKPYKCDQCDYSAAQKSNLDNHLVK 940
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 17/100 (17%)
Query: 114 CIYCKAVLSTNLNELIEH-------CRTC--KSMIRTDPFRH--------KFVCYACDYF 156
C Y A ST + +I+H C C ++ ++D +H + C CDY
Sbjct: 251 CDYSAARKSTLDDHMIKHTGEKPYMCGECGFRTARKSDLSKHMRIHTGEKPYKCDQCDYS 310
Query: 157 SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ + H+ HTG+KPY CG+C +R++ + L H+K
Sbjct: 311 AAQKSHLDQHLTKHTGDKPYMCGECGYRTSRKSYLSQHMK 350
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKPY CG+C +R+A L H++
Sbjct: 414 YKCDQCDYAAAWKSHLDKHVTKHTGEKPYMCGECGYRAAQKINLTVHMR 462
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 44/101 (43%), Gaps = 22/101 (21%)
Query: 114 CIYCKAVLSTNLNELIEH-------CRTC--KSMIRTDPFRH--------KFVCYACDYF 156
C Y A S N L++H C C +S R+ RH F C C Y
Sbjct: 924 CDYSAAQKSNLDNHLVKHTGEKPYMCGECGFRSAGRSTLSRHMKTHTEDKPFKCGECGYR 983
Query: 157 SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ H+RTHTGEKPY C QC + +A LH HL K
Sbjct: 984 T-----AIKHMRTHTGEKPYKCDQCDYATAQKFNLHQHLTK 1019
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C C Y + + H+RTHTGEKPY C QC + + + L HL K
Sbjct: 1 MRTHTGEKPYKCEECGYRTAQNYTLSKHMRTHTGEKPYKCDQCDYSATQKSSLDLHLTK 59
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+R+ + C CDY + + + H+ H+G+KPY CG+C +R+ + L H++
Sbjct: 798 MRSHTGERPYKCDQCDYSAAHKSSLDQHLAKHSGDKPYMCGECGYRTTHKSALSKHMR 855
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HT EKPY CG+C +R+A + L H++
Sbjct: 1045 MRTHTGEKPYKCDQCDYSAAVKSNLNKHLAKHTNEKPYMCGECGYRAAQESTLSEHMQ 1102
Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY CG+C R+A + L H++
Sbjct: 518 MRTHTREKSYKCDQCDYSAAEKFALVQHLTKHTGEKPYMCGECGLRTAWKSTLLRHMR 575
Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 123 TNLNELIEHCRTC--KSMIRTDPFRH--------KFVCYACDYFSYNIGCMRSHIRTHTG 172
T+ E C+ C K+ ++D +H + C CDY + + H+ HTG
Sbjct: 143 THTGEKPYKCKECGYKTAYKSDLSKHMRNHTGEKPYKCDQCDYSAAWKSSLDLHLTKHTG 202
Query: 173 EKPYACGQCAFRSASVAGLHYHLK 196
+KPY CG+C +R+A L H++
Sbjct: 203 DKPYMCGECGYRTARKDTLSEHMR 226
Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKPY C +C +R+A + L H+K
Sbjct: 695 YKCDQCDYSAARKSHLDLHLARHTGEKPYMCDECGYRAAHKSNLSRHMK 743
Score = 43.1 bits (100), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%)
Query: 133 RTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLH 192
RT +RT + C CDY + + H+ HTG+KPY CG+C R+A L
Sbjct: 983 RTAIKHMRTHTGEKPYKCDQCDYATAQKFNLHQHLTKHTGDKPYMCGECGHRTAHKFDLS 1042
Query: 193 YHLK 196
H++
Sbjct: 1043 VHMR 1046
Score = 42.7 bits (99), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 148 FVCYACDYFSYNIGCMRSH-IRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + + H + HTGEKPY CG+C +R+A + L H++
Sbjct: 470 YKCDQCDYSAAHKSSLYKHRLAKHTGEKPYLCGECGYRTADRSTLSRHMR 519
Score = 42.7 bits (99), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY CG+C F + + L H++
Sbjct: 29 MRTHTGEKPYKCDQCDYSATQKSSLDLHLTKHTGEKPYMCGECGFSTTLKSTLSRHMR 86
Score = 42.4 bits (98), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C Y + + H+R HTGEKPY C QC + +A + L HL K
Sbjct: 150 YKCKECGYKTAYKSDLSKHMRNHTGEKPYKCDQCDYSAAWKSSLDLHLTK 199
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + + H+RTHTGEKPY C QC + +A + L+ HL K
Sbjct: 1026 YMCGECGHRTAHKFDLSVHMRTHTGEKPYKCDQCDYSAAVKSNLNKHLAK 1075
Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + H+RTHTGEKPY C QC + +A + L H+ K
Sbjct: 555 YMCGECGLRTAWKSTLLRHMRTHTGEKPYRCDQCDYSAAEKSTLDDHITK 604
Score = 39.3 bits (90), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H+RTHTGEKPY C C + +A L HL+K
Sbjct: 66 YMCGECGFSTTLKSTLSRHMRTHTGEKPYKCHLCDYSAAQKTPLDVHLRK 115
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAG 190
++C C Y + + H++THTGEKPY C Q S S G
Sbjct: 330 YMCGECGYRTSRKSYLSQHMKTHTGEKPYKCDQKEMASPSCGG 372
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+RTHT EK Y C QC + +A L HL K
Sbjct: 499 YLCGECGYRTADRSTLSRHMRTHTREKSYKCDQCDYSAAEKFALVQHLTK 548
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C CDY + H+ HTG+KPY C QC + +A + L HL
Sbjct: 667 YKCDHCDYSTTQKSSFDIHLARHTGDKPYKCDQCDYSAARKSHLDLHL 714
Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H++THTG K Y C QC + +A + L +H+K+
Sbjct: 611 YMCGECGYRTALRANLSRHMKTHTGGKLYKCDQCNYSAARKSALSFHVKR 660
>gi|260811177|ref|XP_002600299.1| hypothetical protein BRAFLDRAFT_66800 [Branchiostoma floridae]
gi|229285585|gb|EEN56311.1| hypothetical protein BRAFLDRAFT_66800 [Branchiostoma floridae]
Length = 684
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
IRT + C CDY S + H+ HTGEKPY CG+C +R+A + L H+++
Sbjct: 360 IRTHTGEKPYKCDRCDYSSAFKSGLNRHMIKHTGEKPYMCGECEYRTADRSSLTVHMRE 418
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 129 IEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASV 188
++ CK M +T F C C Y + + HIRTHTGEKPY C +C + SA
Sbjct: 323 VDKSSLCKHM-KTHTGEKAFKCGECGYRAAVRFHLSEHIRTHTGEKPYKCDRCDYSSAFK 381
Query: 189 AGLHYHLKK 197
+GL+ H+ K
Sbjct: 382 SGLNRHMIK 390
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + H+ HTG KPY C QC +RSAS + L HL+K
Sbjct: 93 YKCDQCDYSAARKAHLDKHMAKHTGNKPYLCEQCGYRSASKSDLTVHLRK 142
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 137 SMIRTDPFRHKFVC-----YACDYFSYNIGCMR---SHIRTHTGEKPYACGQCAFRSASV 188
S ++TD +HKF+C Y CD Y+ R H+ H G+KPY C +C + +A
Sbjct: 18 SALKTDLRKHKFICHDEKPYKCDQCDYSAARKRYLDQHMANHIGKKPYMCEKCGYMTAGR 77
Query: 189 AGLHYHLKK 197
L H++K
Sbjct: 78 YELSRHMRK 86
Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 29/53 (54%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ ++C C Y + + H+R HTGEKPY C QC + +A A L H+ K
Sbjct: 62 KKPYMCEKCGYMTAGRYELSRHMRKHTGEKPYKCDQCDYSAARKAHLDKHMAK 114
Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F+C C Y + + + H++THTGEK + CG+C +R+A L H++
Sbjct: 313 FMCGECGYRTVDKSSLCKHMKTHTGEKAFKCGECGYRAAVRFHLSEHIR 361
Score = 45.1 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 25/48 (52%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD+ S +R H+ HTG+KPY C QC F S L HL +
Sbjct: 512 CDQCDFSSARKDNLRKHMFKHTGDKPYKCEQCEFSSVWKKSLDLHLSR 559
Score = 44.7 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 136 KSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
K +R F+H + C C++ S + H+ H GEKP+ CG+C +R+A+ L
Sbjct: 522 KDNLRKHMFKHTGDKPYKCEQCEFSSVWKKSLDLHLSRHAGEKPFMCGECEYRTAARPDL 581
Query: 192 HYHLKK 197
H+ K
Sbjct: 582 ARHMTK 587
Score = 44.7 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C+Y + + + H+R HTG+KPY C QC + SA L H
Sbjct: 397 YMCGECEYRTADRSSLTVHMREHTGQKPYKCDQCNYSSARKNHLRKH 443
Score = 44.7 bits (104), Expect = 0.024, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C+Y + + H+R HTG+KP+ C QC F SA L H+ K
Sbjct: 482 FMCGECEYQTAARPDLAKHMRKHTGDKPHKCDQCDFSSARKDNLRKHMFK 531
Score = 43.1 bits (100), Expect = 0.070, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C++ S + H+ HTGEKP+ CG+C +++A+ L H++K
Sbjct: 454 YKCDQCEFSSVWKKSLDLHMARHTGEKPFMCGECEYQTAARPDLAKHMRK 503
Score = 41.6 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 148 FVCYACDYFSYNIGCMRSH-IRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C+Y S +R H + H+GEKPY C QC F S L H+ +
Sbjct: 425 YKCDQCNYSSARKNHLRKHAVEKHSGEKPYKCDQCEFSSVWKKSLDLHMAR 475
Score = 40.4 bits (93), Expect = 0.37, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C+Y + + H+ HTG+KP+ C QC + SA L H+ K
Sbjct: 566 FMCGECEYRTAARPDLARHMTKHTGDKPHKCDQCDYSSARKDNLRKHMFK 615
>gi|260832642|ref|XP_002611266.1| hypothetical protein BRAFLDRAFT_73339 [Branchiostoma floridae]
gi|229296637|gb|EEN67276.1| hypothetical protein BRAFLDRAFT_73339 [Branchiostoma floridae]
Length = 632
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C CDY + G + H+ HTGEKPY CG C +++A + L HL+K
Sbjct: 194 FKCGQCDYSTARKGNLDRHMAKHTGEKPYMCGDCEYKTADRSSLAVHLRK 243
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 27/48 (56%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+F C CDY + C+ H R HTGEKPY CGQC + + + L H
Sbjct: 108 RFECTECDYTAAKKYCLVIHTRIHTGEKPYKCGQCDYCARQKSSLDLH 155
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C CDY + G + H+ HTGEK Y CG+C +RSA + L H+ K
Sbjct: 487 MRTHTGVKPYKCDLCDYSTAQRGNLDRHMAKHTGEKRYICGECGYRSADRSALKSHMVK 545
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+F+C C Y + + + +H+R+HTGEKPY C QC + + + L H+ K
Sbjct: 411 RFMCVECGYRTAHKSHLTAHMRSHTGEKPYKCDQCDYSATHKSQLDRHMAK 461
Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+R+ + C CDY + + + H+ HTGEKP+ CG+C +R+A + L H++
Sbjct: 431 MRSHTGEKPYKCDQCDYSATHKSQLDRHMAKHTGEKPFLCGECGYRTADRSSLTVHMR 488
Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + ++ + H+RTHTGEKPY C QC + + L HL K
Sbjct: 580 FMCGKCGYRAADLSYLTVHMRTHTGEKPYKCDQCDYSATRKDYLEKHLIK 629
Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C+Y + + + H+R HTGEKPY C QC + +A L H+ K
Sbjct: 222 YMCGDCEYKTADRSSLAVHLRKHTGEKPYKCDQCDYSAAKKDNLDRHMAK 271
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKP+ CG+C +R+A ++ L H++
Sbjct: 552 YTCDYCDYSAARKFHLDRHMAKHTGEKPFMCGKCGYRAADLSYLTVHMR 600
Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C+Y + + + H+R HTG+KP+ CGQC + +A L H+ K
Sbjct: 166 LMCDECEYRTADRSNLSVHMRLHTGDKPFKCGQCDYSTARKGNLDRHMAK 215
Score = 42.4 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+++C C Y S + ++SH+ HTG KPY C C + +A L H+ K
Sbjct: 523 RYICGECGYRSADRSALKSHMVKHTGVKPYTCDYCDYSAARKFHLDRHMAK 573
Score = 39.3 bits (90), Expect = 0.87, Method: Composition-based stats.
Identities = 14/27 (51%), Positives = 20/27 (74%)
Query: 170 HTGEKPYACGQCAFRSASVAGLHYHLK 196
HTGEKPY CG+C +R+A + L H++
Sbjct: 4 HTGEKPYMCGECGYRTADRSALTVHMR 30
Score = 37.4 bits (85), Expect = 3.1, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 130 EHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASV 188
++C + I T +K C CDY + + H T H+GEKP C +C +R+A
Sbjct: 121 KYCLVIHTRIHTGEKPYK--CGQCDYCARQKSSLDLHRTTKHSGEKPLMCDECEYRTADR 178
Query: 189 AGLHYHLK 196
+ L H++
Sbjct: 179 SNLSVHMR 186
>gi|170045417|ref|XP_001850306.1| transcriptional repressor CTCF [Culex quinquefasciatus]
gi|167868475|gb|EDS31858.1| transcriptional repressor CTCF [Culex quinquefasciatus]
Length = 667
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 15/87 (17%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRT 169
C +C++ +T+ EL+ H R +RH C CDY S + ++ HIR
Sbjct: 227 CKHCESTFTTS-GELVRHVR----------YRHTHEKPHKCPECDYASVELSKLKRHIRC 275
Query: 170 HTGEKPYACGQCAFRSASVAGLHYHLK 196
HTGE+PY C C + S L HL+
Sbjct: 276 HTGERPYQCPHCTYASPDTFKLKRHLR 302
Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 50/117 (42%), Gaps = 16/117 (13%)
Query: 79 CKHCHSQLS-HLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKS 137
CKHC S + +L+ H + +P+ P C Y S L++L H R C +
Sbjct: 227 CKHCESTFTTSGELVRHVRYRHTHEKPHK----CPECDYA----SVELSKLKRHIR-CHT 277
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
R + C C Y S + ++ H+R HTGEKPY C C R L H
Sbjct: 278 GERP------YQCPHCTYASPDTFKLKRHLRIHTGEKPYECDVCHARFTQSNSLKAH 328
>gi|260789299|ref|XP_002589684.1| hypothetical protein BRAFLDRAFT_129473 [Branchiostoma floridae]
gi|229274866|gb|EEN45695.1| hypothetical protein BRAFLDRAFT_129473 [Branchiostoma floridae]
Length = 1089
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 21/126 (16%)
Query: 91 LLDHCKTCSYMIRPNANNTFSPFCIYCKAVLS----------TNLNELIEHCRTC----- 135
+ + C ++ PN + SP ++C S +N NE CR C
Sbjct: 1 MAEACDGYPTVVPPNFGDG-SPTGVFCDQPTSGRARLVRQPKSNTNEKPYMCRECGYRAA 59
Query: 136 -----KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAG 190
+RT F C CDY + + H+ HTG+KPY CG+C +R+A +
Sbjct: 60 VKSHLSQHMRTHTGDKPFKCDQCDYSAAQKSSLDLHLAKHTGDKPYMCGECGYRTAKRSH 119
Query: 191 LHYHLK 196
L H++
Sbjct: 120 LANHMR 125
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + +H+RTHTGEKPY C QC + ++ + L HL K
Sbjct: 245 YKCDQCDYSAAEKSTLSNHMRTHTGEKPYKCDQCDYSASRKSSLDLHLAK 294
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A + L+ HL K
Sbjct: 875 YMCGECGYRTVQKSHLSEHMRTHTGEKPYNCDQCDYSTAHKSTLYKHLAK 924
Score = 49.3 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C CDY + + H+ HTGEKPY C QC + +A + L+ HL K
Sbjct: 950 MRTHTGEKPYKCDQCDYSAAQKSTLNEHLAMHTGEKPYKCDQCDYSTAHKSTLYKHLAK 1008
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFR 184
T +RT + C CDY + + ++ HI HTG+KPY CG+CA+R
Sbjct: 1029 TLSRHMRTHTGEKPYKCDQCDYSAVQMFTLKQHIAKHTGDKPYMCGECAYR 1079
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + + H+ HTG+KPY CG+C +R+A + L H++
Sbjct: 987 YKCDQCDYSTAHKSTLYKHLAKHTGDKPYMCGECGYRTAQKSTLSRHMR 1035
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 9/100 (9%)
Query: 99 SYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFS 157
S + +P AN + C C L+ N N L +H +RT + C CDY +
Sbjct: 749 SAVSQPEANTDEKLYMCEECGYRLAYNSN-LTQH-------MRTHTGEKPYKCDQCDYVA 800
Query: 158 YNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ H+ H G+KPY CG+C +R+A + L ++K
Sbjct: 801 ATKSNLDKHLAIHNGDKPYMCGECGYRTARKSTLSRQMRK 840
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T +IRT + C C+Y + + H+ H+G KPY CG+C F++A + L
Sbjct: 315 TLSKLIRTQTGEKPYKCDQCNYSAARKDSLDLHLAKHSGNKPYICGECGFKTAKKSHLAE 374
Query: 194 HLK 196
H+K
Sbjct: 375 HIK 377
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGEKPY C QC + +A L HL
Sbjct: 161 YMCGECGYRAAEKSALVKHVRTHTGEKPYKCDQCYYSAAQRCSLDQHL 208
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + H+ HTG+KP+ CG+C +R+A + L H++
Sbjct: 894 MRTHTGEKPYNCDQCDYSTAHKSTLYKHLAKHTGDKPFMCGECGYRAAQKSHLSDHMR 951
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CDY + + H+ HTG+KPY CG+C +R+A + L H++
Sbjct: 124 MRTHTGDKPFKCDQCDYSTAYKPNLDRHLSKHTGDKPYMCGECGYRAAEKSALVKHVR 181
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T +R + + C CDY + + H+ HTG+KPY CG+C +R+ + L
Sbjct: 833 TLSRQMRKHTGKKTYKCDQCDYSAARKCSLNQHLAKHTGDKPYMCGECGYRTVQKSHLSE 892
Query: 194 HLK 196
H++
Sbjct: 893 HMR 895
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + + + L H+ K
Sbjct: 1015 YMCGECGYRTAQKSTLSRHMRTHTGEKPYKCDQCDYSAVQMFTLKQHIAK 1064
Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTG+KP+ C QC + +A + L HL K
Sbjct: 49 YMCRECGYRAAVKSHLSQHMRTHTGDKPFKCDQCDYSAAQKSSLDLHLAK 98
Score = 45.8 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
T + +RT + C CDY + + H+ HTG+KPY CG+C +R+A + L
Sbjct: 259 TLSNHMRTHTGEKPYKCDQCDYSASRKSSLDLHLAKHTGDKPYMCGECGYRAARKSTL 316
Score = 45.8 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + HI+THTGE PY C QC + +A + L HL K
Sbjct: 357 YICGECGFKTAKKSHLAEHIKTHTGETPYKCDQCDYSAARKSNLDSHLAK 406
Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + +H+RTHTG+KP+ C QC + +A L HL K
Sbjct: 105 YMCGECGYRTAKRSHLANHMRTHTGDKPFKCDQCDYSTAYKPNLDRHLSK 154
Score = 45.1 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C Y + + H+ HTG+KPY CG+C +R+A + L H++
Sbjct: 180 VRTHTGEKPYKCDQCYYSAAQRCSLDQHLAHHTGDKPYMCGECGYRTAKKSYLSRHMR 237
Score = 44.7 bits (104), Expect = 0.021, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+R+HTG+KPY C QC + +A + L H++
Sbjct: 217 YMCGECGYRTAKKSYLSRHMRSHTGDKPYKCDQCDYSAAEKSTLSNHMR 265
Score = 43.1 bits (100), Expect = 0.064, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + IRT TGEKPY C QC + +A L HL K
Sbjct: 301 YMCGECGYRAARKSTLSKLIRTQTGEKPYKCDQCNYSAARKDSLDLHLAK 350
>gi|260823080|ref|XP_002604011.1| hypothetical protein BRAFLDRAFT_71700 [Branchiostoma floridae]
gi|229289336|gb|EEN60022.1| hypothetical protein BRAFLDRAFT_71700 [Branchiostoma floridae]
Length = 704
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
R ++C C Y + N G + H+RTHTGEKPY C QC + + + L+ H+
Sbjct: 393 RKPYICGQCGYKATNKGNIAKHVRTHTGEKPYKCDQCDYSATQKSHLNRHM 443
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++T + C CDY + ++ H+ HTGEKPY CG+C +R+A L HL++
Sbjct: 586 MKTHSGEKPYKCDQCDYSAAEKSNLKRHLVKHTGEKPYMCGECGYRAAEKNNLTKHLRR 644
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G M H+ HTGEKPY CG+C FR+A A L H++
Sbjct: 249 GNMERHVVKHTGEKPYMCGECGFRTAQKANLSKHMR 284
Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + +H+ +HTG+KPY C QC +R+ L H+K
Sbjct: 530 MRTHTGEKPYKCDQCDYSAGRKSHLDNHLASHTGDKPYICEQCGYRTTEKYRLSQHMK 587
Score = 42.7 bits (99), Expect = 0.080, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C CDY + + H+ T H EKPY CG+C +R+A L H+ +
Sbjct: 415 VRTHTGEKPYKCDQCDYSATQKSHLNRHMATKHASEKPYMCGECGYRTAVKHLLAQHMLR 474
Query: 198 TY 199
T+
Sbjct: 475 TH 476
Score = 41.2 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSA 186
+ F C CDY + + HI HTGEKPY CG+C +R A
Sbjct: 318 KKPFKCDQCDYSAAQKARLTKHIAVKHTGEKPYMCGECGYRLA 360
Score = 39.7 bits (91), Expect = 0.75, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C + + + H+RTHTGEKPY C C + + L H
Sbjct: 264 YMCGECGFRTAQKANLSKHMRTHTGEKPYKCDMCDYSAIQKVHLKQH 310
Score = 39.3 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 151 YAC-DYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
Y C +Y + + H+R HTGEKPY C QC + +A L H+ K +
Sbjct: 655 YMCGEYRADKKSILVKHMRKHTGEKPYRCDQCDYSAALKGTLERHVAKKH 704
Score = 38.9 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 147 KFVCYACDYFSYNIGCMRSH-IRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + N H + HT KPY CGQC +++ + + H++
Sbjct: 366 RLKCGQCDYVAVNKSYFDIHTVEKHTSRKPYICGQCGYKATNKGNIAKHVR 416
Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 32/53 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
++C C Y + + + H+RTHTGEK + C +C + ++ + L+ H+ + ++
Sbjct: 104 YMCGECGYKAPEMTSLFLHMRTHTGEKTFNCDKCDYSASLESNLNRHISEKHN 156
Score = 37.7 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G M H+ HT EKPY CG+C +++ + L H++
Sbjct: 89 GNMGRHMVKHTVEKPYMCGECGYKAPEMTSLFLHMR 124
Score = 37.0 bits (84), Expect = 4.2, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + C CDY + ++ H HTG+KP+ C QC + +A A L H+
Sbjct: 283 MRTHTGEKPYKCDMCDYSAIQKVHLKQHTAAKHTGKKPFKCDQCDYSAAQKARLTKHI 340
>gi|350404458|ref|XP_003487111.1| PREDICTED: hypothetical protein LOC100745727 [Bombus impatiens]
Length = 752
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 15/87 (17%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRT 169
C +C++ +T+ EL+ H R +RH C CDY S + + HIR
Sbjct: 286 CKFCESAFTTS-GELVRHVR----------YRHTHEKPHKCPECDYASVELSKLHRHIRC 334
Query: 170 HTGEKPYACGQCAFRSASVAGLHYHLK 196
HTGE+PY C C + S L HL+
Sbjct: 335 HTGERPYQCPHCTYASPDTFKLKRHLR 361
Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 11/83 (13%)
Query: 112 PFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHT 171
P C Y S L++L H R C + R P++ C C Y S + ++ H+R HT
Sbjct: 316 PECDYA----SVELSKLHRHIR-CHTGER--PYQ----CPHCTYASPDTFKLKRHLRIHT 364
Query: 172 GEKPYACGQCAFRSASVAGLHYH 194
GEKPY C C R L H
Sbjct: 365 GEKPYECDFCQARFTQSNSLKAH 387
>gi|260806352|ref|XP_002598048.1| hypothetical protein BRAFLDRAFT_108620 [Branchiostoma floridae]
gi|229283319|gb|EEN54060.1| hypothetical protein BRAFLDRAFT_108620 [Branchiostoma floridae]
Length = 349
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+RTHTGEKPY CG+C FR+A + L H++
Sbjct: 172 YMCGECGYRAAQRSSLSQHMRTHTGEKPYKCGECGFRAALKSDLARHMR 220
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + + C CDY++ + H HTGEKPY CG C +R+A + L H++
Sbjct: 1 MRTHTGKKPYKCEQCDYYAARKSHLDEHRMKHTGEKPYMCGVCGYRTAHQSYLSKHMR 58
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + HIRTHTGEKPY C QC + +A L H+
Sbjct: 257 YMCGECGYRATQRSTLSKHIRTHTGEKPYRCDQCEYSTAQKVNLDRHI 304
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C+Y + + +H THTG+KPY CG+C +R+A + L H++
Sbjct: 135 MRTHTGEKPYKCDQCNYSAAKKYTLVTHQATHTGDKPYMCGECGYRAAQRSSLSQHMR 192
Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
++C C Y + + H+RTHTGEKPY C QC + +A
Sbjct: 116 YMCGECGYRTVEKSKLSVHMRTHTGEKPYKCDQCNYSAA 154
Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 15/89 (16%)
Query: 121 LSTNLNELIEHCRTC--KSMIRTDPFRH--------KFVCYACDYFS---YNIGCMRSHI 167
+ T+ E C C ++ +++D RH + C CDY + Y++ ++ I
Sbjct: 191 MRTHTGEKPYKCGECGFRAALKSDLARHMRTHTGEKPYKCDQCDYSATQKYSVDIHKAAI 250
Query: 168 RTHTGEKPYACGQCAFRSASVAGLHYHLK 196
H+GEKPY CG+C +R+ + L H++
Sbjct: 251 --HSGEKPYMCGECGYRATQRSTLSKHIR 277
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C+Y + + HI T H G+KPY CG+C +R+ + L H++
Sbjct: 78 MRTHTGEKSYKCDQCEYSTIRKSQLGCHIATKHGGDKPYMCGECGYRTVEKSKLSVHMR 136
>gi|260823004|ref|XP_002603973.1| hypothetical protein BRAFLDRAFT_71739 [Branchiostoma floridae]
gi|229289298|gb|EEN59984.1| hypothetical protein BRAFLDRAFT_71739 [Branchiostoma floridae]
Length = 909
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T +RT + C CDY + + + H+R HTG+KPY CG+C FR++ L
Sbjct: 758 TLSRHMRTHTGEKPYKCDQCDYAAADKSTLYKHVRKHTGDKPYMCGECGFRASRKDILSV 817
Query: 194 HLK 196
H++
Sbjct: 818 HMR 820
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + + H+ HTGEKPY CG+C +R+A + L H++
Sbjct: 235 YKCDQCDYSAAHKSSLEQHVAKHTGEKPYTCGECGYRTAHKSDLSKHMR 283
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+RTHTGEKPY C QC + +A + L+ H++K
Sbjct: 744 YMCEKCGYRTADRSTLSRHMRTHTGEKPYKCDQCDYAAADKSTLYKHVRK 793
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + H+ HTGEKPY CG+C FR+A L H++
Sbjct: 282 MRTHTGEKPYKCDQCDYSAARKSTFDQHLVKHTGEKPYMCGECGFRTAHQCYLSRHMR 339
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ H+G KPY CG+C +R+A+ A L H++
Sbjct: 338 MRTHTGERPYKCGQCDYTAAGKSALDRHLAKHSGAKPYMCGECGYRTANKANLSAHMR 395
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + N + +H+RTHTGEKPY C QC + +A L H+
Sbjct: 375 YMCGECGYRTANKANLSAHMRTHTGEKPYKCDQCDYSAAQKVTLDDHI 422
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C CDY + + HI HTGEKPY CG+C +R+A+ + L HL K
Sbjct: 394 MRTHTGEKPYKCDQCDYSAAQKVTLDDHIAAKHTGEKPYMCGECGYRTATKSTLGRHLTK 453
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTG+KPY C QC + +A + L HL K
Sbjct: 460 YMCGECGYRATRKSQLSRHMRTHTGDKPYKCDQCDYSAARKSALKLHLAK 509
Score = 47.0 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ H+GEKPY CG C +++A L H+K
Sbjct: 819 MRTHTGEKPYKCDQCDYSAPQRASLDKHLAKHSGEKPYTCGDCGYKAARKHHLSEHMK 876
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 122 STNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
+T ++L H RT T HK C CDY + + H+ HTGEKPY C +C
Sbjct: 697 TTFKSDLSRHMRT-----HTGEKSHK--CDQCDYSAARKSTLDDHLTKHTGEKPYMCEKC 749
Query: 182 AFRSASVAGLHYHLK 196
+R+A + L H++
Sbjct: 750 GYRTADRSTLSRHMR 764
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT C CDY + + H++ H+GEKPY CG+C +R+ + L H++
Sbjct: 651 MRTHTGEKPHKCDQCDYSAARKSSLGKHLQIHSGEKPYMCGECGYRTTFKSDLSRHMR 708
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H +THTGEKPY C QC + +A + L HL+
Sbjct: 179 YMCGECGYRTAEKSHLSRHTKTHTGEKPYKCDQCDYSAAEKSSLDVHLR 227
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C Y + + + H+RTHTGEKPY C QC + +A + HL K
Sbjct: 263 YTCGECGYRTAHKSDLSKHMRTHTGEKPYKCDQCDYSAARKSTFDQHLVK 312
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H+RTHTGEKPY C QC + + A L HL K
Sbjct: 800 YMCGECGFRASRKDILSVHMRTHTGEKPYKCDQCDYSAPQRASLDKHLAK 849
Score = 45.1 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + H+R H+G+KPY C QC + +A + L H+ K
Sbjct: 207 YKCDQCDYSAAEKSSLDVHLRIHSGDKPYKCDQCDYSAAHKSSLEQHVAK 256
Score = 44.3 bits (103), Expect = 0.031, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+ HTG+KPY CG+C +R+ + L H++
Sbjct: 432 YMCGECGYRTATKSTLGRHLTKHTGDKPYMCGECGYRATRKSQLSRHMR 480
Score = 43.9 bits (102), Expect = 0.036, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
M+ H+ HTGEKPY CG+C +R+A + L H K
Sbjct: 166 MKRHVVKHTGEKPYMCGECGYRTAEKSHLSRHTK 199
Score = 42.7 bits (99), Expect = 0.072, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+C C Y + + H+RTHTGEKP+ C QC + +A + L HL+
Sbjct: 633 MCGECGYRTTFKSDLSRHMRTHTGEKPHKCDQCDYSAARKSSLGKHLQ 680
Score = 41.2 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEK + C QC + +A + L HL K
Sbjct: 688 YMCGECGYRTTFKSDLSRHMRTHTGEKSHKCDQCDYSAARKSTLDDHLTK 737
Score = 40.4 bits (93), Expect = 0.37, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C C Y + + H++ HTGEKPY+C C++ +A + L HL
Sbjct: 856 YTCGDCGYKAARKHHLSEHMKIHTGEKPYSCHLCSYSAARKSTLSKHL 903
>gi|260788461|ref|XP_002589268.1| hypothetical protein BRAFLDRAFT_242600 [Branchiostoma floridae]
gi|229274444|gb|EEN45279.1| hypothetical protein BRAFLDRAFT_242600 [Branchiostoma floridae]
Length = 280
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C Q S LD L S+M + C C S +L+ L +H
Sbjct: 31 CEECSKQFSQLDQLK-----SHMHTHTGQKPYK--CEECSRQFS-DLSSLKKH------- 75
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT ++ C C+ +G +++H RTHTGEKPY CG+C+ + ++ L H++
Sbjct: 76 MRTHTGEKQYRCEECNKQFSQLGNLKTHFRTHTGEKPYKCGECSRQFTTLNHLKRHMQ 133
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
KS +R + C C + ++SH+ THTGEKPY C +C+ + + ++ L H+
Sbjct: 157 KSHVRYHTGEKPYRCEECSKQFSQLHHLKSHMHTHTGEKPYKCEECSRQFSELSSLKKHM 216
Query: 196 K 196
+
Sbjct: 217 R 217
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
KS + T + C C + ++ H+RTHTGEKPY C +C+ + + + H+
Sbjct: 185 KSHMHTHTGEKPYKCEECSRQFSELSSLKKHMRTHTGEKPYRCEECSRQFSQQNDVKRHM 244
Query: 196 K 196
+
Sbjct: 245 Q 245
>gi|193596515|ref|XP_001944997.1| PREDICTED: transcriptional repressor CTCFL-like isoform 1
[Acyrthosiphon pisum]
gi|328719636|ref|XP_003246815.1| PREDICTED: transcriptional repressor CTCFL-like isoform 2
[Acyrthosiphon pisum]
Length = 680
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 105 NANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCM 163
N + P+ C C + +T+ EL+ H R T HK C CDY S + M
Sbjct: 286 NTHTGTKPYQCRSCPSAFTTS-GELVRHVR----YKHTHEKPHK--CTICDYASVELSKM 338
Query: 164 RSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R+H+R HTGE+PY C C + S L HL+
Sbjct: 339 RNHMRCHTGERPYQCPHCTYASPDTFKLKRHLR 371
>gi|260823124|ref|XP_002604033.1| hypothetical protein BRAFLDRAFT_119785 [Branchiostoma floridae]
gi|229289358|gb|EEN60044.1| hypothetical protein BRAFLDRAFT_119785 [Branchiostoma floridae]
Length = 954
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY CG+C +R+AS + L H++
Sbjct: 583 MRTHTGEKPYKCDQCDYSAAQKSSLDQHLSKHTGEKPYMCGECGYRTASKSHLSLHMR 640
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+R HTG+KPY CG+C +R+A + L H++
Sbjct: 808 MRTHTGEKPYKCDQCDYSAAQKSTLDQHLRKHTGDKPYMCGECGYRTAQKSNLSTHMR 865
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+R HTGEKPY CG+C +R+A L H+K
Sbjct: 639 MRTHTGEKPYNCDQCDYSVAHKSHLDRHLRKHTGEKPYMCGECGYRTAQRCTLSLHMK 696
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+RTHTGEKPY C QC + +A + L HL+K
Sbjct: 789 YICGECGYRAVHKSDLSKHMRTHTGEKPYKCDQCDYSAAQKSTLDQHLRK 838
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 140 RTDPFRHKF--------VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
R D RH F +C+ C Y + + H++THTGEKPY C QC + +A + L
Sbjct: 291 RGDVGRHVFKETGEKSHICWECGYKTVQKSDLSKHMKTHTGEKPYKCDQCDYSAAHKSHL 350
Query: 192 HYHLKK 197
HL+K
Sbjct: 351 DRHLRK 356
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++T + C C+Y + + H+R HTGEKPY CG+C FR+ L H++
Sbjct: 695 MKTHTGEKPYKCDQCEYSAARKSTLDKHLRKHTGEKPYMCGECGFRTTHKESLSRHMR 752
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H RTHTGEKPY C QC + +A + L YHL K
Sbjct: 162 YMCGECGYRTDRKSHLSRHTRTHTGEKPYKCDQCDYSAARKSTLDYHLVK 211
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y +++ + H+RTHTG+KPY C QC + SA + L HL
Sbjct: 507 YMCDECGYSAFHKSDLSRHMRTHTGDKPYKCDQCDYSSAHKSALDRHL 554
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + + C CDY + H+ HT EKPY CG+C +R+A + L H+K
Sbjct: 864 MRTHTGKKSYKCNQCDYAAARKSTWDIHLAKHTDEKPYMCGECGYRAAQRSNLSRHMK 921
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H++THTGEKPY C QC + +A + L HL+K
Sbjct: 676 YMCGECGYRTAQRCTLSLHMKTHTGEKPYKCDQCEYSAARKSTLDKHLRK 725
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+RTHTGEKPY C QC + A + L HL+K
Sbjct: 620 YMCGECGYRTASKSHLSLHMRTHTGEKPYNCDQCDYSVAHKSHLDRHLRK 669
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + + H+RTHTGEKPY C QC + +A + L HL K
Sbjct: 417 YMCGECGHRTASKSRLSLHMRTHTGEKPYKCDQCDYSAAQKSSLDQHLSK 466
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHI------RTHTGEKPYACGQCAFRSASVAGLH 192
+RT + C CDY + + H+ RTHTGEKPY C QC + +A + L
Sbjct: 436 MRTHTGEKPYKCDQCDYSAAQKSSLDQHLSKHTDMRTHTGEKPYKCDQCDYSAAQKSSLD 495
Query: 193 YHLKK 197
HL K
Sbjct: 496 QHLSK 500
Score = 45.1 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 151 YACDYFSYNIGCMRSH-IRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
Y CDY S + + H + HTGEKPY CG+C R+AS + L H++
Sbjct: 391 YKCDYSSAHKSALDRHLVVKHTGEKPYMCGECGHRTASKSRLSLHMR 437
Score = 44.3 bits (103), Expect = 0.030, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H+RTHTGEKPY C QC + +A + L HL K
Sbjct: 564 YMCGECGHRTAFKSRLSLHMRTHTGEKPYKCDQCDYSAAQKSSLDQHLSK 613
Score = 43.1 bits (100), Expect = 0.055, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSH-IRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY S + + H + HTGEKPY CG+C R+A + L H++
Sbjct: 526 MRTHTGDKPYKCDQCDYSSAHKSALDRHLVVKHTGEKPYMCGECGHRTAFKSRLSLHMR 584
Score = 43.1 bits (100), Expect = 0.057, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + H HTGEKPY CG+C +R+A + L H++
Sbjct: 69 MRTHTGEKPYNCDQCDYSFAVKHQLIDHQTRHTGEKPYMCGECGYRAAQRSTLSRHMR 126
Score = 43.1 bits (100), Expect = 0.063, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 131 HCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSH-IRTHTGEKPYACGQCAFRSASVA 189
H + +RT + C CDY + + +H + H+GEKPY CG+C +R+ +
Sbjct: 743 HKESLSRHMRTHTGEKPYKCDQCDYSAARKSTLDNHTVAKHSGEKPYICGECGYRAVHKS 802
Query: 190 GLHYHLK 196
L H++
Sbjct: 803 DLSKHMR 809
Score = 42.7 bits (99), Expect = 0.075, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C + + + + H+RTHTGEKPY C QC + +A + L H
Sbjct: 732 YMCGECGFRTTHKESLSRHMRTHTGEKPYKCDQCDYSAARKSTLDNH 778
Score = 42.7 bits (99), Expect = 0.084, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++T + C CDY + + + H+R HTGEKPY C +C + + + L H++
Sbjct: 326 MKTHTGEKPYKCDQCDYSAAHKSHLDRHLRKHTGEKPYMCDECGYSAFHKSDLSRHMR 383
Score = 42.4 bits (98), Expect = 0.100, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY C +C + + + L H++
Sbjct: 470 MRTHTGEKPYKCDQCDYSAAQKSSLDQHLSKHTGEKPYMCDECGYSAFHKSDLSRHMR 527
Score = 42.0 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R+HTGEKPY C Q + +A L+ HL K
Sbjct: 106 YMCGECGYRAAQRSTLSRHMRSHTGEKPYKCDQRDYSAAQKTHLNSHLAK 155
Score = 41.2 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + +H+RTHTG+K Y C QC + +A + HL K
Sbjct: 845 YMCGECGYRTAQKSNLSTHMRTHTGKKSYKCNQCDYAAARKSTWDIHLAK 894
Score = 40.0 bits (92), Expect = 0.49, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + + H++THT +KPY C QC + +A + L+ H
Sbjct: 901 YMCGECGYRAAQRSNLSRHMKTHTADKPYKCDQCDYSAAQKSTLNKH 947
Score = 40.0 bits (92), Expect = 0.55, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T +R+ + C DY + + SH+ H+GEKPY CG+C +R+ + L
Sbjct: 120 TLSRHMRSHTGEKPYKCDQRDYSAAQKTHLNSHLAKHSGEKPYMCGECGYRTDRKSHLSR 179
Query: 194 HLK 196
H +
Sbjct: 180 HTR 182
Score = 39.7 bits (91), Expect = 0.73, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
++C C Y + + H+RTHTGEKPY C QC + A
Sbjct: 50 YMCGECGYRTAYRSHLSRHMRTHTGEKPYNCDQCDYSFA 88
Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G M + HTGEKPY CG+C +R+A + L H++
Sbjct: 35 GDMGRQVVKHTGEKPYMCGECGYRTAYRSHLSRHMR 70
Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFR 184
RT + C CDY + + H+ HTG+KPY CG+C +
Sbjct: 182 RTHTGEKPYKCDQCDYSAARKSTLDYHLVKHTGDKPYMCGECGIK 226
Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y +++ + H+RTHTG+KPY +C + SA + L HL
Sbjct: 363 YMCDECGYSAFHKSDLSRHMRTHTGDKPY---KCDYSSAHKSALDRHL 407
>gi|260782851|ref|XP_002586494.1| hypothetical protein BRAFLDRAFT_120924 [Branchiostoma floridae]
gi|229271608|gb|EEN42505.1| hypothetical protein BRAFLDRAFT_120924 [Branchiostoma floridae]
Length = 360
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C CDY + + + H+ THTGEKPY C QC + +A + LH HL K
Sbjct: 157 MRTHTGEKPYKCDQCDYSAAHKSTLNQHLATHTGEKPYKCDQCDYSAAKNSNLHKHLAK 215
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 17/111 (15%)
Query: 95 CKTCSYMIRPNAN--------NTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFR 145
C C Y N+N P+ C C +T + L H +RT
Sbjct: 196 CDQCDYSAAKNSNLHKHLAKHTGDKPYMCGEC-GYRTTQKSTLSRH-------MRTHTGE 247
Query: 146 HKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + ++ HI HTG+KPY C +C +R+A + L H+K
Sbjct: 248 KPYKCDQCDYSAVQMYTLKQHIAKHTGDKPYMCEECGYRTAQKSDLFQHMK 298
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGEKPY C QC + +A + L+ HL
Sbjct: 138 YMCGECGYRTVQKSHLSDHMRTHTGEKPYKCDQCDYSAAHKSTLNQHL 185
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTG+KPY CG+C +R+ + L H++
Sbjct: 194 YKCDQCDYSAAKNSNLHKHLAKHTGDKPYMCGECGYRTTQKSTLSRHMR 242
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + + + L H+ K
Sbjct: 222 YMCGECGYRTTQKSTLSRHMRTHTGEKPYKCDQCDYSAVQMYTLKQHIAK 271
Score = 42.7 bits (99), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 31/49 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C + + + H++THTG+KPY CG+C +++A + L H++
Sbjct: 54 YMCGKCVFRTAYKSALSQHMKTHTGDKPYMCGECGYKTARKSTLSRHMR 102
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTG+KPY CG+C +R+ + L H++
Sbjct: 110 YKCDQCDYSAAWKCSLNQHLAKHTGDKPYMCGECGYRTVQKSHLSDHMR 158
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H++THTG+KPY C QC + ++ L HL K
Sbjct: 278 YMCEECGYRTAQKSDLFQHMKTHTGDKPYKCDQCDYSASRKYSLDRHLAK 327
Score = 36.2 bits (82), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 21/32 (65%)
Query: 165 SHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
S +TGE+PY CG+C FR+A + L H+K
Sbjct: 43 SQPEANTGEEPYMCGKCVFRTAYKSALSQHMK 74
>gi|260806388|ref|XP_002598066.1| hypothetical protein BRAFLDRAFT_85719 [Branchiostoma floridae]
gi|229283337|gb|EEN54078.1| hypothetical protein BRAFLDRAFT_85719 [Branchiostoma floridae]
Length = 535
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 11/83 (13%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C Y A +ST L +H IRT + C CDY + + + H+ HTGE
Sbjct: 61 CGYRSAQMST----LYQH-------IRTHTGEKPYKCDLCDYSAASKSNLNKHLAKHTGE 109
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
KPY CG+C FR+A + L H++
Sbjct: 110 KPYMCGECGFRTAQTSHLSAHMR 132
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY CG+C +R+A + L H++
Sbjct: 398 MRTHTGEKPYKCKQCDYSAAEKSSLNKHLAKHTGEKPYMCGECGYRTAQRSTLSKHMR 455
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H HTGEKPY CG+C +RSA ++ L+ H++
Sbjct: 28 YKCDQCDYSAAQKSTLDQHRTKHTGEKPYMCGECGYRSAQMSTLYQHIR 76
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y S + + HIRTHTGEKPY C C + +AS + L+ HL K
Sbjct: 56 YMCGECGYRSAQMSTLYQHIRTHTGEKPYKCDLCDYSAASKSNLNKHLAK 105
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H HTGEKPY CG+C +R+A + L H++
Sbjct: 342 MRTHTGEKPYKCDQCDYSAARKSVLDQHRTKHTGEKPYMCGECGYRAAQKSDLSRHMR 399
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A + L+ HL K
Sbjct: 379 YMCGECGYRAAQKSDLSRHMRTHTGEKPYKCKQCDYSAAEKSSLNKHLAK 428
Score = 42.7 bits (99), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C+Y + + H HTGEKPY CG+C FR+A + L H+K
Sbjct: 274 YMCDQCEYSTAWKHHLVQHRTKHTGEKPYMCGECGFRTALKSTLSTHMK 322
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
++C C Y + + H+RTHTGEKPY C Q A +S
Sbjct: 435 YMCGECGYRTAQRSTLSKHMRTHTGEKPYKCNQTAIKS 472
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C Y + + H+R HTGEKPY C QC + +A + L H K
Sbjct: 1 MCRECGYRTTTKARLSRHLRIHTGEKPYKCDQCDYSAAQKSTLDQHRTK 49
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
++C C Y + + H+R HTGEKPY C QC + +A
Sbjct: 246 YMCGECGYRTVEKSKLSRHMRAHTGEKPYMCDQCEYSTA 284
Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 148 FVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CDY + + +HI T HT +KPY CG+C +R+ + L H++
Sbjct: 217 FKCDQCDYSATQKYHLGNHIATKHTDDKPYMCGECGYRTVEKSKLSRHMR 266
Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
++C C + + + +H+R HTGEKPY CG+C S
Sbjct: 112 YMCGECGFRTAQTSHLSAHMRIHTGEKPYMCGECGDNS 149
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 21/32 (65%)
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
H+RTHTGEKPY C QC + +A + L H K
Sbjct: 341 HMRTHTGEKPYKCDQCDYSAARKSVLDQHRTK 372
>gi|432848850|ref|XP_004066482.1| PREDICTED: oocyte zinc finger protein XlCOF7.1-like [Oryzias
latipes]
Length = 714
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT F C CD +IG +++H+RTHTGEKP+AC +C + + L H+
Sbjct: 558 KRHMRTHTGEKPFPCTECDKSFSHIGNLKTHMRTHTGEKPFACKECKTSFSDSSNLKKHM 617
Query: 196 K 196
+
Sbjct: 618 R 618
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT F C CD + ++ HIRTHTGEKP+ C +CA R + ++ L H+
Sbjct: 362 KTHMRTHTGEKPFSCKDCDASFSDFSNLKRHIRTHTGEKPFFCKECAKRFSQISHLKSHM 421
Query: 196 K 196
+
Sbjct: 422 R 422
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 68/172 (39%), Gaps = 19/172 (11%)
Query: 24 NRTNITSDVYIAVLVFSNLTFFITAQLVLMSLDQILNLNLSVLLVTTIPTQNHSLCKHCH 83
NR ++ S I + V S F + QI NL V T + CK C
Sbjct: 297 NRFSVWSQFRIHMRVHSGRKTFFCKE-CDKRFTQISNLKTHVRTHTG---EKPFSCKECD 352
Query: 84 SQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDP 143
+ H+ L ++M FS C C A S + + L H IRT
Sbjct: 353 ASFRHVSHLK-----THMRTHTGEKPFS--CKDCDASFS-DFSNLKRH-------IRTHT 397
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F C C I ++SH+RTHT +KP+AC +CA R + L H+
Sbjct: 398 GEKPFFCKECAKRFSQISHLKSHMRTHTRDKPFACKECAKRFTQICNLKKHM 449
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 19/120 (15%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLS--TNLNELIEHCRTCK 136
C C ++ H+ L +M FS C C A S +NL K
Sbjct: 460 CNQCDARFRHISKLK-----RHMGMHTGERPFS--CKECDASFSRISNL----------K 502
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ +RT F C CD I +++H+RTHTGEKP+ C +C + ++ L H++
Sbjct: 503 THMRTHTGEKPFSCKECDKSFSRISNLKTHMRTHTGEKPFTCKECNTSFSHISHLKRHMR 562
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT F C CD +I +++H+R+HTGEKP++C +C ++ L+ H+
Sbjct: 642 KKHMRTHKGERPFSCEECDKSFSHISSLKAHMRSHTGEKPFSCEECNKSFRHISHLYAHM 701
Query: 196 K 196
+
Sbjct: 702 R 702
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+R R F C CD I +++H+RTHTGEKP++C +C V+ L H++
Sbjct: 309 MRVHSGRKTFFCKECDKRFTQISNLKTHVRTHTGEKPFSCKECDASFRHVSHLKTHMR 366
>gi|441636236|ref|XP_004089986.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor HIVEP3
[Nomascus leucogenys]
Length = 2381
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 191 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 244
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K+VC C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1724 RGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKHCHFAFKTKGNLTKHMKSKAH 1779
>gi|440911632|gb|ELR61277.1| Transcription factor HIVEP3 [Bos grunniens mutus]
Length = 2390
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 191 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 244
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K+VC C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1751 RGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKHCHFAFKTKGNLTKHMKSKAH 1806
>gi|432104494|gb|ELK31112.1| Transcription factor HIVEP3 [Myotis davidii]
Length = 2397
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 191 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 244
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K+VC C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1758 RGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKHCHFAFKTKGNLTKHMKSKAH 1813
>gi|431922570|gb|ELK19513.1| Transcription factor HIVEP3 [Pteropus alecto]
Length = 2398
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 194 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 247
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K+VC C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1754 RGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKHCHFAFKTKGNLTKHMKSKAH 1809
>gi|426329162|ref|XP_004025612.1| PREDICTED: transcription factor HIVEP3 isoform 2 [Gorilla gorilla
gorilla]
Length = 2405
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 191 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 244
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K+VC C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1751 RGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKHCHFAFKTKGNLTKHMKSKAH 1806
>gi|426329160|ref|XP_004025611.1| PREDICTED: transcription factor HIVEP3 isoform 1 [Gorilla gorilla
gorilla]
Length = 2406
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 191 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 244
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K+VC C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1751 RGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKHCHFAFKTKGNLTKHMKSKAH 1806
>gi|426218639|ref|XP_004003549.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor HIVEP3 [Ovis
aries]
Length = 2392
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 191 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 244
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 27/56 (48%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K+VC C ++ HIRTHT +PYAC C F + L H+K H
Sbjct: 1751 RGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYACKHCHFAFKTKGNLTKHMKSKAH 1806
>gi|12658305|gb|AAK01082.1|AF278765_1 kappa B and V(D)J recombination signal sequences binding protein
[Homo sapiens]
Length = 2406
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 191 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 244
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K+VC C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1751 RGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKHCHFAFKTKGNLTKHMKSKAH 1806
>gi|40557580|gb|AAR88090.1| zinc finger protein ZAS3 [Mus musculus]
Length = 2282
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 184 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 237
Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R ++VC C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1717 RGRYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKHCHFAFKTKGNLTKHMKSKAH 1772
>gi|410966890|ref|XP_003989960.1| PREDICTED: transcription factor HIVEP3 [Felis catus]
Length = 2397
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 186 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 239
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K+VC C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1750 RGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKHCHFAFKTKGNLTKHMKSKAH 1805
>gi|403291983|ref|XP_003937039.1| PREDICTED: transcription factor HIVEP3 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 2404
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 191 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 244
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K+VC C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1751 RGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKHCHFAFKTKGNLTKHMKSKAH 1806
>gi|403291981|ref|XP_003937038.1| PREDICTED: transcription factor HIVEP3 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 2405
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 191 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 244
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K+VC C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1751 RGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKHCHFAFKTKGNLTKHMKSKAH 1806
>gi|402854129|ref|XP_003891731.1| PREDICTED: transcription factor HIVEP3 [Papio anubis]
Length = 2406
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 191 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 244
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K+VC C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1751 RGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKHCHFAFKTKGNLTKHMKSKAH 1806
>gi|397488923|ref|XP_003815491.1| PREDICTED: transcription factor HIVEP3 [Pan paniscus]
Length = 2406
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 191 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 244
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K+VC C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1751 RGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKHCHFAFKTKGNLTKHMKSKAH 1806
>gi|395853113|ref|XP_003799062.1| PREDICTED: transcription factor HIVEP3 [Otolemur garnettii]
Length = 2381
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 191 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 244
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K+VC C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1746 RGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKHCHFAFKTKGNLTKHMKSKAH 1801
>gi|383420465|gb|AFH33446.1| transcription factor HIVEP3 [Macaca mulatta]
Length = 2406
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 191 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 244
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K+VC C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1751 RGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKHCHFAFKTKGNLTKHMKSKAH 1806
>gi|355557886|gb|EHH14666.1| hypothetical protein EGK_00631 [Macaca mulatta]
Length = 2406
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 191 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 244
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K+VC C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1751 RGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKHCHFAFKTKGNLTKHMKSKAH 1806
>gi|351696385|gb|EHA99303.1| Transcription factor HIVEP3 [Heterocephalus glaber]
Length = 2389
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 190 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 243
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K+VC C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1747 RGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKHCHFAFKTKGNLTKHMKSKAH 1802
>gi|348551690|ref|XP_003461663.1| PREDICTED: transcription factor HIVEP3-like [Cavia porcellus]
Length = 2384
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 191 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 244
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K+VC C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1748 RGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKHCHFAFKTKGNLTKHMKSKAH 1803
>gi|345780490|ref|XP_003431999.1| PREDICTED: transcription factor HIVEP3 [Canis lupus familiaris]
Length = 2200
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 191 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 244
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K+VC C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1755 RGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKHCHFAFKTKGNLTKHMKSKAH 1810
>gi|344287271|ref|XP_003415377.1| PREDICTED: transcription factor HIVEP3 [Loxodonta africana]
Length = 2397
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 191 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 244
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K+VC C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1749 RGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKHCHFAFKTKGNLTKHMKSKAH 1804
>gi|354479345|ref|XP_003501872.1| PREDICTED: transcription factor HIVEP3 [Cricetulus griseus]
gi|344241006|gb|EGV97109.1| Transcription factor HIVEP3 [Cricetulus griseus]
Length = 2361
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 192 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 245
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K+VC C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1724 RGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKHCHFAFKTKGNLTKHMKSKAH 1779
>gi|338721774|ref|XP_001916496.2| PREDICTED: LOW QUALITY PROTEIN: transcription factor HIVEP3-like
[Equus caballus]
Length = 2395
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 191 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 244
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K+VC C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1748 RGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKHCHFAFKTKGNLTKHMKSKAH 1803
>gi|301780984|ref|XP_002925910.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor HIVEP3-like
[Ailuropoda melanoleuca]
Length = 2393
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 191 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 244
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K+VC C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1753 RGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKHCHFAFKTKGNLTKHMKSKAH 1808
>gi|297665318|ref|XP_002811015.1| PREDICTED: transcription factor HIVEP3-like [Pongo abelii]
Length = 1736
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 191 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 244
>gi|297473328|ref|XP_002686580.1| PREDICTED: transcription factor HIVEP3 [Bos taurus]
gi|296489043|tpg|DAA31156.1| TPA: KIAA1555 protein-like [Bos taurus]
Length = 2392
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 191 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 244
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K+VC C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1751 RGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKHCHFAFKTKGNLTKHMKSKAH 1806
>gi|296192487|ref|XP_002744078.1| PREDICTED: transcription factor HIVEP3 [Callithrix jacchus]
Length = 1732
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 187 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 240
>gi|291399150|ref|XP_002715761.1| PREDICTED: human immunodeficiency virus type I enhancer binding
protein 3 [Oryctolagus cuniculus]
Length = 2361
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 167 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 220
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K+VC C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1718 RGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKHCHFAFKTKGNLTKHMKSKAH 1773
>gi|260786359|ref|XP_002588225.1| hypothetical protein BRAFLDRAFT_124694 [Branchiostoma floridae]
gi|229273385|gb|EEN44236.1| hypothetical protein BRAFLDRAFT_124694 [Branchiostoma floridae]
Length = 368
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IRT + C C +G ++SH+RTHTGEKPY C QC+ R + + L H+
Sbjct: 210 KRHIRTHTGEKPYRCDKCGKQFSELGTLKSHMRTHTGEKPYKCEQCSRRFSKLGSLKTHM 269
Query: 196 K 196
+
Sbjct: 270 R 270
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T KS +RT + C C +G +++H+RTHTGEKPY C QC+ + ++ L+
Sbjct: 236 TLKSHMRTHTGEKPYKCEQCSRRFSKLGSLKTHMRTHTGEKPYKCEQCSNTFSQLSNLNT 295
Query: 194 HLK 196
H++
Sbjct: 296 HMR 298
Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ + C C + G ++ H+RTHTGEKPY C +C + + ++ L H+
Sbjct: 98 KRHIRSHTGEKPYKCEQCSKQFVDQGTLKRHMRTHTGEKPYRCDKCNKQFSELSNLKSHM 157
Query: 196 K 196
+
Sbjct: 158 R 158
Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T K +RT + C C+ + ++SH+RTHTGEKPY C QC+ + + + L
Sbjct: 124 TLKRHMRTHTGEKPYRCDKCNKQFSELSNLKSHMRTHTGEKPYRCEQCSKQFSELLHLKM 183
Query: 194 HLK 196
H+K
Sbjct: 184 HVK 186
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 24/34 (70%)
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+++H+RTHTGEKPY C +C+ + + L H++
Sbjct: 321 LKAHMRTHTGEKPYRCTECSRQFSEQGSLKRHMR 354
Score = 35.8 bits (81), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C + + +H+R HTGEKPY C +C + + + L H+
Sbjct: 266 KTHMRTHTGEKPYKCEQCSNTFSQLSNLNTHMRIHTGEKPYRCDECTRQFSLLVNLKAHM 325
Query: 196 K 196
+
Sbjct: 326 R 326
>gi|260832396|ref|XP_002611143.1| hypothetical protein BRAFLDRAFT_59888 [Branchiostoma floridae]
gi|229296514|gb|EEN67153.1| hypothetical protein BRAFLDRAFT_59888 [Branchiostoma floridae]
Length = 191
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+R HTGEKPY CG+C FR+A + L H++
Sbjct: 113 YKCDQCDYSATQKWNLDQHLRKHTGEKPYMCGECGFRTAQKSTLSTHMR 161
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+C CDY + M H+ HTGEKPY CG+C +R+ ++ L H++
Sbjct: 1 MCGECDYSTAWKSNMDQHLAKHTGEKPYMCGECGYRTVQMSTLSQHMR 48
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + + + H+RTHTGEKPY C QC + S + L H
Sbjct: 28 YMCGECGYRTVQMSTLSQHMRTHTGEKPYKCDQCDYTSVRKSSLARH 74
Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C Y + + + H++ HTGEKPY C QC + + L HL+K
Sbjct: 85 FKCGECGYGTAQMYHLSQHMKVHTGEKPYKCDQCDYSATQKWNLDQHLRK 134
Score = 40.0 bits (92), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSH-IRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY S + H + HT EKP+ CG+C + +A + L H+K
Sbjct: 47 MRTHTGEKPYKCDQCDYTSVRKSSLARHNLAKHTAEKPFKCGECGYGTAQMYHLSQHMK 105
Score = 36.6 bits (83), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C + + + +H+RTHT KPY C QC + +A + L HL
Sbjct: 141 YMCGECGFRTAQKSTLSTHMRTHT--KPYKCDQCDYSAAQKSSLDQHL 186
>gi|194665885|ref|XP_001787517.1| PREDICTED: transcription factor HIVEP3 [Bos taurus]
Length = 2775
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 191 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 244
Score = 40.8 bits (94), Expect = 0.29, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 20/39 (51%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
R K+VC C ++ HIRTHT +PY C C F
Sbjct: 1751 RGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKHCHF 1789
>gi|156914811|gb|AAI52564.1| HIVEP3 protein [Homo sapiens]
gi|168278913|dbj|BAG11336.1| human immunodeficiency virus type I enhancer binding protein 3
[synthetic construct]
Length = 2405
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 191 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 244
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K+VC C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1751 RGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKHCHFAFKTKGNLTKHMKSKAH 1806
>gi|157818503|ref|NP_001101442.1| transcription factor HIVEP3 [Rattus norvegicus]
gi|149023834|gb|EDL80331.1| human immunodeficiency virus type I enhancer binding protein 3
(predicted) [Rattus norvegicus]
Length = 2350
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 191 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 244
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K+VC C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1719 RGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCRHCHFAFKTKGNLTKHMKSKAH 1774
>gi|124107625|ref|NP_034787.2| transcription factor HIVEP3 [Mus musculus]
gi|187668011|sp|A2A884.1|ZEP3_MOUSE RecName: Full=Transcription factor HIVEP3; AltName: Full=Human
immunodeficiency virus type I enhancer-binding protein 3
homolog; AltName: Full=KB-binding and regognition
component; AltName: Full=Kappa-B and V(D)J recombination
signal sequences-binding protein; AltName:
Full=Kappa-binding protein 1; Short=KBP-1; AltName:
Full=Recombinant component; AltName: Full=Schnurri-3;
AltName: Full=Zinc finger protein ZAS3
gi|148698484|gb|EDL30431.1| human immunodeficiency virus type I enhancer binding protein 3 [Mus
musculus]
gi|225000958|gb|AAI72623.1| Human immunodeficiency virus type I enhancer binding protein 3
[synthetic construct]
Length = 2348
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 184 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 237
Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R ++VC C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1717 RGRYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKHCHFAFKTKGNLTKHMKSKAH 1772
>gi|119627578|gb|EAX07173.1| human immunodeficiency virus type I enhancer binding protein 3
[Homo sapiens]
Length = 2406
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 191 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 244
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K+VC C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1751 RGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKHCHFAFKTKGNLTKHMKSKAH 1806
>gi|114555871|ref|XP_001172796.1| PREDICTED: transcription factor HIVEP3 isoform 1 [Pan troglodytes]
Length = 2404
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 191 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 244
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K+VC C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1751 RGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKHCHFAFKTKGNLTKHMKSKAH 1806
>gi|114555869|ref|XP_524684.2| PREDICTED: transcription factor HIVEP3 isoform 2 [Pan troglodytes]
Length = 2405
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 191 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 244
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K+VC C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1751 RGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKHCHFAFKTKGNLTKHMKSKAH 1806
>gi|109003232|ref|XP_001085309.1| PREDICTED: transcription factor HIVEP3 isoform 2 [Macaca mulatta]
gi|355745200|gb|EHH49825.1| hypothetical protein EGM_00550 [Macaca fascicularis]
Length = 2406
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 191 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 244
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K+VC C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1751 RGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKHCHFAFKTKGNLTKHMKSKAH 1806
>gi|109003235|ref|XP_001085194.1| PREDICTED: transcription factor HIVEP3 isoform 1 [Macaca mulatta]
Length = 2405
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 191 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 244
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K+VC C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1751 RGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKHCHFAFKTKGNLTKHMKSKAH 1806
>gi|189181750|ref|NP_001121186.1| transcription factor HIVEP3 isoform b [Homo sapiens]
Length = 2405
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 191 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 244
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K+VC C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1751 RGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKHCHFAFKTKGNLTKHMKSKAH 1806
>gi|116089331|ref|NP_078779.2| transcription factor HIVEP3 isoform a [Homo sapiens]
gi|74756245|sp|Q5T1R4.1|ZEP3_HUMAN RecName: Full=Transcription factor HIVEP3; AltName: Full=Human
immunodeficiency virus type I enhancer-binding protein
3; AltName: Full=Kappa-B and V(D)J recombination signal
sequences-binding protein; AltName: Full=Kappa-binding
protein 1; Short=KBP-1; AltName: Full=Zinc finger
protein ZAS3
gi|225001042|gb|AAI72754.1| human immunodeficiency virus type I enhancer binding protein 3
[synthetic construct]
Length = 2406
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 191 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 244
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K+VC C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1751 RGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKHCHFAFKTKGNLTKHMKSKAH 1806
>gi|29421200|dbj|BAB13381.2| KIAA1555 protein [Homo sapiens]
Length = 2414
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 200 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 253
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K+VC C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1760 RGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKHCHFAFKTKGNLTKHMKSKAH 1815
>gi|74148592|dbj|BAE24263.1| unnamed protein product [Mus musculus]
Length = 596
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ R F C CDY M H RTHTGE
Sbjct: 469 CRYCDAVFHERYA-LIQHQKSHKNEKR-------FKCDQCDYACRQERHMIMHKRTHTGE 520
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
>gi|397501173|ref|XP_003821267.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 40 [Pan
paniscus]
Length = 2754
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 106 ANNTFSP-FCIYCKAVLSTNLNELIEHCRTCKSMIRTD-PFRH-KFVCYACDYFSYNIGC 162
AN+T SP IY +++ +N+ +E + C +++ P + K++C C+
Sbjct: 399 ANSTQSPPMPIYNSTHVASVVNQSVE--QMCNLLLKDQKPXKQGKYICEYCNRACAKPSV 456
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ HIR+HTGE+PY C C F + + L+ H K H
Sbjct: 457 LLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAH 494
Score = 44.3 bits (103), Expect = 0.029, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 2121 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 2176
>gi|390361632|ref|XP_003729969.1| PREDICTED: uncharacterized protein LOC100889453 isoform 1
[Strongylocentrotus purpuratus]
gi|390361634|ref|XP_003729970.1| PREDICTED: uncharacterized protein LOC100889453 isoform 2
[Strongylocentrotus purpuratus]
Length = 784
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 47/111 (42%), Gaps = 15/111 (13%)
Query: 95 CKTCSYMIRPNANNTF---------SPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPF 144
C C YM R +A T S F C+ CK T ++L +H + DP
Sbjct: 513 CNVCDYMTRSSARLTIHQKKHSKQTSEFHCVPCKKSFVT-ASKLQQHKHSPMHKNAVDPI 571
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+C C Y + HIR HTGEKPY C C + +A + L H+
Sbjct: 572 ----ICEHCGYVTKKRDNFLVHIRKHTGEKPYRCNHCNYAAADGSTLKRHV 618
Score = 43.9 bits (102), Expect = 0.038, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 19/134 (14%)
Query: 78 LCKHCHSQLSHLDLLDH--CKTCSYMIRPNAN--------NTFSPF-CIYCKAVLSTNLN 126
L +H HS + H + +D C+ C Y+ + N P+ C +C + + +
Sbjct: 555 LQQHKHSPM-HKNAVDPIICEHCGYVTKKRDNFLVHIRKHTGEKPYRCNHCNYA-AADGS 612
Query: 127 ELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
L H S IR PFR C C + + + H+R HTGE+P+ C C + +
Sbjct: 613 TLKRHVMARHSSIR--PFR----CSQCQFSCVDKKGLTVHLRKHTGERPFLCDLCPYAAK 666
Query: 187 SVAGLHYHLKKTYH 200
L H + +H
Sbjct: 667 RSGALTVHRRTHFH 680
>gi|260832578|ref|XP_002611234.1| hypothetical protein BRAFLDRAFT_71195 [Branchiostoma floridae]
gi|229296605|gb|EEN67244.1| hypothetical protein BRAFLDRAFT_71195 [Branchiostoma floridae]
Length = 343
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
Query: 112 PF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
PF C C+ +TN + L EH RT M P++ C CDY + G + H+ H
Sbjct: 233 PFMCEQCE-YRTTNRSYLSEHMRTHTGM---KPYK----CDQCDYSASCKGNLVKHMYKH 284
Query: 171 TGEKPYACGQCAFRSASVAGLHYHLKK 197
GEKPY CG+C FR+A ++ L H++K
Sbjct: 285 NGEKPYMCGECGFRTARMSCLTVHIRK 311
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C AC Y + + + H+RTHTGEKPY C QC + +A L HL K
Sbjct: 178 YMCDACGYRTADKSSLTEHMRTHTGEKPYKCDQCDYSAAHKVSLDRHLTK 227
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CD+ + + G ++ H+ HTGEKPY C C +R+A + L H++
Sbjct: 141 MRTHTGEKPYKCDQCDFSASHKGNLKKHMAKHTGEKPYMCDACGYRTADKSSLTEHMR 198
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IRT + C CDY + + + H+ HTG+KPY C +C +R+AS + L H++
Sbjct: 85 IRTHTGEKPYKCDQCDYSTTHRSALNRHMAKHTGKKPYMCDECGYRTASRSHLSEHMR 142
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+RTHTGEKPY C QC F ++ L H+ K
Sbjct: 122 YMCDECGYRTASRSHLSEHMRTHTGEKPYKCDQCDFSASHKGNLKKHMAK 171
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C + + N + HIRTHTGEKPY C QC + + + L+ H+ K
Sbjct: 66 LMCGECGFRTANRSNLSRHIRTHTGEKPYKCDQCDYSTTHRSALNRHMAK 115
Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 119 AVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAC 178
+ + + L EH +RT + C CDY + + + H+ HTGEKP+ C
Sbjct: 184 GYRTADKSSLTEH-------MRTHTGEKPYKCDQCDYSAAHKVSLDRHLTKHTGEKPFMC 236
Query: 179 GQCAFRSASVAGLHYHLK 196
QC +R+ + + L H++
Sbjct: 237 EQCEYRTTNRSYLSEHMR 254
>gi|148682057|gb|EDL14004.1| mCG8606 [Mus musculus]
Length = 790
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKT 198
+ + F H VC C ++ ++ H+RTHTGEKPY C CAFR A + L H+K
Sbjct: 527 VHSKSFPH--VCVECGKGFRHLSELKKHMRTHTGEKPYQCQYCAFRCADQSNLKTHIKSK 584
Query: 199 Y 199
+
Sbjct: 585 H 585
>gi|260818160|ref|XP_002603952.1| hypothetical protein BRAFLDRAFT_242316 [Branchiostoma floridae]
gi|229289277|gb|EEN59963.1| hypothetical protein BRAFLDRAFT_242316 [Branchiostoma floridae]
Length = 323
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 32/59 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT F C CDY + + +HIRTHTGEKPY C QC + +A L HL K
Sbjct: 141 MRTHTGEKPFKCDQCDYSAARKSELSNHIRTHTGEKPYKCDQCDYSAAHRYALKQHLSK 199
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IRT + C CDY + + ++ H+ HT EKPY CG+C +R+A+++ L H+K
Sbjct: 169 IRTHTGEKPYKCDQCDYSAAHRYALKQHLSKHTDEKPYMCGECGYRTANMSNLTAHMK 226
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + N + H+RTHTGEKPY C QC + +A + L HL
Sbjct: 38 YMCGECGYRAVNKSTLSRHMRTHTGEKPYKCDQCDYSTAQKSTLDQHL 85
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + N+ + +H++THTGEKP+ C QC + +A L HLKK
Sbjct: 206 YMCGECGYRTANMSNLTAHMKTHTGEKPFKCEQCDYSAARKYTLDLHLKK 255
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + ++C C Y + N H+RTHTGEKP+ C QC + +A + L H++
Sbjct: 113 MRTHTDQKPYMCGKCGYLTANRSTFTVHMRTHTGEKPFKCDQCDYSAARKSELSNHIR 170
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KPY CG+C +R+ + + L H++
Sbjct: 1 MRTHTGEKPYKCDQCDYSTAQKSTLDQHLVRHTGDKPYMCGECGYRAVNKSTLSRHMR 58
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KPY CG+C +R+ + + L H++
Sbjct: 57 MRTHTGEKPYKCDQCDYSTAQKSTLDQHLVRHTGDKPYMCGECGYRAVNKSTLSRHMR 114
Score = 43.1 bits (100), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+RTHTGEKPY G C + +A+ A L H +
Sbjct: 262 YMCGECGYRTARKSDLSKHMRTHTGEKPYMSGSCGYSTANKAHLSRHRR 310
Score = 42.4 bits (98), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 119 AVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAC 178
+ N++ L H ++T F C CDY + + H++ H GEK Y C
Sbjct: 212 GYRTANMSNLTAH-------MKTHTGEKPFKCEQCDYSAARKYTLDLHLKKHNGEKLYMC 264
Query: 179 GQCAFRSASVAGLHYHLK 196
G+C +R+A + L H++
Sbjct: 265 GECGYRTARKSDLSKHMR 282
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
+RT ++ +C Y + N + H RTHTGEKPY C QC
Sbjct: 281 MRTHTGEKPYMSGSCGYSTANKAHLSRHRRTHTGEKPYKCDQC 323
>gi|260834159|ref|XP_002612079.1| hypothetical protein BRAFLDRAFT_227700 [Branchiostoma floridae]
gi|229297452|gb|EEN68088.1| hypothetical protein BRAFLDRAFT_227700 [Branchiostoma floridae]
Length = 285
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 56/119 (47%), Gaps = 17/119 (14%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKS 137
C+ C Q S D+L IR + T P+ C C S L+ L +H RT
Sbjct: 116 CEECSRQFSRKDIL------KKHIRTHTGET--PYDCKVCNMQFS-QLDNLKQHMRT--- 163
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
DP+R C C +++H+RTHTGEKPY CG+C+ R + + L H++
Sbjct: 164 HTGEDPYR----CEECSRQFSQRRHLKTHMRTHTGEKPYECGECSRRFSVLCTLKRHMR 218
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 68/150 (45%), Gaps = 18/150 (12%)
Query: 48 AQLVLMSLDQILNLNLSVLLVTTIPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNAN 107
A V++S D I VT + T+ C+ C Q +L ++ IR +
Sbjct: 2 ATNVIVSGD-IKEGGSERDPVTNVTTKAPYRCEECGKQFPYLSHIE------RHIRTHTG 54
Query: 108 NTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSH 166
P+ C C ST L+ L H RT P+R C AC++ + ++SH
Sbjct: 55 E--KPYMCEECSVQFST-LDNLCRHKRT---HTGEKPYR----CEACNWHFNQLKDLKSH 104
Query: 167 IRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IRTHTGEKPY C +C+ + + L H++
Sbjct: 105 IRTHTGEKPYRCEECSRQFSRKDILKKHIR 134
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T K +RT ++C C +++H+RTHTGEKPY C C+ + + ++ L
Sbjct: 212 TLKRHMRTHTGERPYMCGECGREFRQRFDLKTHMRTHTGEKPYRCEHCSRQFSVLSNLKS 271
Query: 194 HLK 196
H+K
Sbjct: 272 HIK 274
>gi|260832638|ref|XP_002611264.1| hypothetical protein BRAFLDRAFT_73340 [Branchiostoma floridae]
gi|229296635|gb|EEN67274.1| hypothetical protein BRAFLDRAFT_73340 [Branchiostoma floridae]
Length = 426
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 21/114 (18%)
Query: 95 CKTCSYMI--RPN------ANNTFSPF-CIYC--KAVLSTNLNELIEHCRTCKSMIRTDP 143
C C Y +PN + PF C C K +NL + I R K P
Sbjct: 292 CGECGYRTARKPNLSRHMIKHTGEKPFVCGECGYKTAHKSNLTKHIRRHRGVK------P 345
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++ C+ CD+ + G + H+ HTGEKPY CG+C +R+A + L H+++
Sbjct: 346 YK----CHQCDFSAAQKGDLDQHMAKHTGEKPYQCGECGYRTARRSNLTVHMRR 395
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKPY CG+C +R+A + L H++
Sbjct: 38 YKCDQCDYSAAEKSNLDEHMAKHTGEKPYMCGECGYRTAFRSNLSVHMR 86
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
F+C C Y + + H+RTHTGEKPY C QC F +A L H
Sbjct: 234 FMCGDCGYRTAFRSSLSKHMRTHTGEKPYKCDQCNFSAAKKENLDQH 280
Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + C C++ + + H THTGEKPY CG+C +R+A L H+
Sbjct: 253 MRTHTGEKPYKCDQCNFSAAKKENLDQHKATHTGEKPYMCGECGYRTARKPNLSRHM 309
Score = 42.7 bits (99), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTG KPY C QC F +A + L H+ K
Sbjct: 66 YMCGECGYRTAFRSNLSVHMRTHTGAKPYKCDQCDFSAAQKSNLDQHMAK 115
Score = 42.4 bits (98), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKP+ CG C +R+A + L H++
Sbjct: 206 YKCDQCDYSATTKSYLDKHMVRHTGEKPFMCGDCGYRTAFRSSLSKHMR 254
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+RTHTG KPY C QC + +A + L H+ K
Sbjct: 10 YMCGECGYRTASRSRLSLHMRTHTGVKPYKCDQCDYSAAEKSNLDEHMAK 59
Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 169 THTGEKPYACGQCAFRSASVAGLHYHLK 196
THTGEKPY CG+C +R+AS + L H++
Sbjct: 3 THTGEKPYMCGECGYRTASRSRLSLHMR 30
Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + N + H++THTG KPY C QC + +A + L H+
Sbjct: 122 YMCEECGYRTNNRSYLTVHMKTHTGLKPYKCDQCDYSTAQKSNLDRHM 169
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+ HTGEKP+ CG+C +++A + L H+++
Sbjct: 290 YMCGECGYRTARKPNLSRHMIKHTGEKPFVCGECGYKTAHKSNLTKHIRR 339
Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CD+ + + H+ HTGEKPY C +C +R+ + + L H+K
Sbjct: 85 MRTHTGAKPYKCDQCDFSAAQKSNLDQHMAKHTGEKPYMCEECGYRTNNRSYLTVHMK 142
Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C Y + + H+RTHTG KPY C QC + + + + L H+
Sbjct: 178 FMCGECGYRVADKYTLTVHMRTHTGVKPYKCDQCDYSATTKSYLDKHM 225
Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTG+K + CG+C +R A L H++
Sbjct: 150 YKCDQCDYSTAQKSNLDRHMAIHTGDKSFMCGECGYRVADKYTLTVHMR 198
>gi|74140944|dbj|BAE22063.1| unnamed protein product [Mus musculus]
gi|74208933|dbj|BAE21212.1| unnamed protein product [Mus musculus]
Length = 598
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ R F C CDY M H RTHTGE
Sbjct: 332 CRYCDAVFHERYA-LIQHQKSHKNEKR-------FKCDQCDYACRQERHMIMHKRTHTGE 383
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 384 KPYACSHCDKTFRQKQLLDMHF---KRYH 409
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 196 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 255
Query: 190 GLHYHLK 196
L H++
Sbjct: 256 KLKRHMR 262
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 230 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 289
>gi|402908763|ref|XP_003917105.1| PREDICTED: transcriptional repressor CTCF-like, partial [Papio
anubis]
Length = 274
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ R F C CDY M H RTHTGE
Sbjct: 16 CRYCDAVFHERY-ALIQHQKSHKNEKR-------FKCDQCDYACRQERHMIMHKRTHTGE 67
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 68 KPYACSHCDKTFRQKQLLDMHF---KRYH 93
>gi|260811193|ref|XP_002600307.1| hypothetical protein BRAFLDRAFT_66809 [Branchiostoma floridae]
gi|229285593|gb|EEN56319.1| hypothetical protein BRAFLDRAFT_66809 [Branchiostoma floridae]
Length = 1342
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Query: 136 KSMIRTDPFRHKFV--------CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSAS 187
++ ++D FRH + C CDY + ++SH+ HTGEKPY CG+C R+A
Sbjct: 102 RTASKSDLFRHAIIHTGDKPYKCDQCDYSATRKDYLKSHLVKHTGEKPYMCGECGQRTAH 161
Query: 188 VAGLHYHLK 196
+ L H++
Sbjct: 162 RSALTKHMR 170
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 52/129 (40%), Gaps = 18/129 (13%)
Query: 74 QNHSLCKHCH-------SQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLN 126
+ H C C S + H+ K C+YM C Y A S L+
Sbjct: 944 EKHYDCDQCDYSTAWKASLVVHMSQHTSEKPCNYMCEK---------CGYMTACRSDLLS 994
Query: 127 ELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
+ +H K RT R F+C C Y + H R HTGEKPY CGQC + +A
Sbjct: 995 HMKKHAARVKGEKRTGDKR--FMCEVCGYRTVKKSDFTVHQRKHTGEKPYKCGQCDYSAA 1052
Query: 187 SVAGLHYHL 195
+ + H+
Sbjct: 1053 RKSHVDQHM 1061
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 10/76 (13%)
Query: 132 CRTCKSMI--RTDPFRHKFV--------CYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
C C M ++D FRH C CDY + + H+ HTGEK + CG+C
Sbjct: 404 CEKCDYMAAKKSDLFRHNRTHTGEKPHKCDQCDYSATRKNYLDRHMTKHTGEKRFVCGEC 463
Query: 182 AFRSASVAGLHYHLKK 197
FR+A L+ H++K
Sbjct: 464 GFRTADNYNLNVHMRK 479
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C+Y + + H+RTHTGEKP+ C QC R+A+ A L H++K
Sbjct: 863 YKCGECEYKTAVKNNLTKHLRTHTGEKPHKCDQCEHRTATKANLAMHMRK 912
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 96 KTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDY 155
KT ++ + N F CI C ++ ++L+ H K+ P++ C CDY
Sbjct: 262 KTDRLALKSSLKNRF--ICIECDYRTASK-SDLVRHT---KAHTGEKPYK----CDQCDY 311
Query: 156 FSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ HI HTGEKPY CG C +++A + L H+K
Sbjct: 312 SAARKDYFDRHIAKHTGEKPYTCGDCEYKAACKSDLTTHMK 352
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 51/124 (41%), Gaps = 9/124 (7%)
Query: 78 LCKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCK 136
+C C + +H+ DL H + I + C Y + +H R +
Sbjct: 207 MCGECGYRAAHMSDLTKHMR-----IHTDEKPYKCDMCDYSSVRKRDLKRHMSKHSRETE 261
Query: 137 SMIR---TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
R +++F+C CDY + + + H + HTGEKPY C QC + +A
Sbjct: 262 KTDRLALKSSLKNRFICIECDYRTASKSDLVRHTKAHTGEKPYKCDQCDYSAARKDYFDR 321
Query: 194 HLKK 197
H+ K
Sbjct: 322 HIAK 325
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 136 KSMIRTDPFRHK--FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
K+ ++ RH F C C Y + ++ + H++ HTGEKPY C QC F SA L
Sbjct: 681 KTSLKKHKARHTKPFKCGECGYRTVSMATLSYHMKRHTGEKPYKCDQCDFSSAWKESLVL 740
Query: 194 HLKK 197
H+ +
Sbjct: 741 HMTR 744
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CD+ S + ++ H HT KP+ CG+C +R+ S+A L YH+K+
Sbjct: 669 YSCEECDFSSQSKTSLKKHKARHT--KPFKCGECGYRTVSMATLSYHMKR 716
Score = 45.8 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + H+ THTGEKPY C +C + + S + L HL+K
Sbjct: 1042 YKCGQCDYSAARKSHVDQHMTTHTGEKPYLCEECGYGTVSKSHLTVHLRK 1091
Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + ++ H+ HTG+KPY C +C FR+A+ + L HL+
Sbjct: 517 YKCDQCDYSAAQKCDLKKHMPKHTGDKPYLCDECGFRTANKSTLVKHLR 565
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY S + H+ HTG+KPY CG+C +R+A+ L H++K
Sbjct: 1235 YKCDQCDYSSAWKKSLVLHMSHHTGKKPYKCGECEYRTAAKHDLVRHMRK 1284
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+F C CDY + + H RTHTGEKP+ C QC + + L H+ K
Sbjct: 401 RFACEKCDYMAAKKSDLFRHNRTHTGEKPHKCDQCDYSATRKNYLDRHMTK 451
Score = 44.7 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C++ + +HI H GEKPY CG+C +R+A ++ L H++
Sbjct: 178 YKCDQCNFSAARKDSFDNHIAKHAGEKPYMCGECGYRAAHMSDLTKHMR 226
Score = 44.3 bits (103), Expect = 0.027, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
Query: 126 NELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
N L +H RT T HK C C++ + + H+R HTGEKPY C QC + S
Sbjct: 876 NNLTKHLRT-----HTGEKPHK--CDQCEHRTATKANLAMHMRKHTGEKPYKCDQCDYSS 928
Query: 186 ASVAGLHYHL 195
A L H+
Sbjct: 929 ARKGDLKKHM 938
Score = 42.7 bits (99), Expect = 0.075, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C + + N + H+R H+GEKPY C QC + +A + L H
Sbjct: 545 YLCDECGFRTANKSTLVKHLRNHSGEKPYKCDQCDYSAARKSYLDQH 591
Score = 42.7 bits (99), Expect = 0.079, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
RT P+ +C C + + ++ + H++ HTGEKPY C QC + SA L H+
Sbjct: 1203 RTKPY----MCGECGHRTVSMSDLSQHMKKHTGEKPYKCDQCDYSSAWKKSLVLHM 1254
Score = 42.4 bits (98), Expect = 0.094, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C++ + + H+R HTGEKP+ C QC + SA L H+ K
Sbjct: 751 FMCGECEFSTAAKHELVRHVRKHTGEKPHKCDQCDYASARKYSLRKHMLK 800
Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H+R HTGEKPY C QC F +A H+ K
Sbjct: 150 YMCGECGQRTAHRSALTKHMRIHTGEKPYKCDQCNFSAARKDSFDNHIAK 199
Score = 42.0 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CD+ S + H+ HTGEKP+ CG+C F +A+ L H++K
Sbjct: 723 YKCDQCDFSSAWKESLVLHMTRHTGEKPFMCGECEFSTAAKHELVRHVRK 772
Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + ++ + H+R HT EKPY C C + S L H+ K
Sbjct: 206 YMCGECGYRAAHMSDLTKHMRIHTDEKPYKCDMCDYSSVRKRDLKRHMSK 255
Score = 40.4 bits (93), Expect = 0.36, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY S G ++ H+ H GEK Y C QC + +A A L H+ +
Sbjct: 919 YKCDQCDYSSARKGDLKKHMFRHHGEKHYDCDQCDYSTAWKASLVVHMSQ 968
Score = 39.3 bits (90), Expect = 0.85, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACG--QCAFRSASVAGLHYHL 195
+FVC C + + + + H+R HTGEKPY C QC + +A L H+
Sbjct: 457 RFVCGECGFRTADNYNLNVHMRKHTGEKPYKCDQLQCDYSAAQKVTLDQHI 507
Score = 38.9 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CDY S +R H+ H GE P+ CG+C + + + L H+KK
Sbjct: 1293 CDQCDYSSACKNNLRKHMFKH-GETPFLCGECGYMAGDRSDLSKHMKK 1339
Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ + C C+Y + + H+R HTG++P+ C QC + SA L H+ K
Sbjct: 1260 KKPYKCGECEYRTAAKHDLVRHMRKHTGKRPHKCDQCDYSSACKNNLRKHMFK 1312
Score = 38.1 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 153 CDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLKK 197
CDY + + HI HTGEKPY C QC + +A L H+ K
Sbjct: 493 CDYSAAQKVTLDQHIAVKHTGEKPYKCDQCDYSAAQKCDLKKHMPK 538
Score = 37.0 bits (84), Expect = 4.1, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKP--YACGQCAFRSASVAGLHY 193
K M R +H + C CDY + + H+ HT EKP Y C +C + +A + L
Sbjct: 936 KHMFRHHGEKH-YDCDQCDYSTAWKASLVVHMSQHTSEKPCNYMCEKCGYMTACRSDLLS 994
Query: 194 HLKK 197
H+KK
Sbjct: 995 HMKK 998
>gi|260806398|ref|XP_002598071.1| hypothetical protein BRAFLDRAFT_85713 [Branchiostoma floridae]
gi|229283342|gb|EEN54083.1| hypothetical protein BRAFLDRAFT_85713 [Branchiostoma floridae]
Length = 590
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+RTHTGEKPY CG+C +R+A A L H+K
Sbjct: 463 YMCGECGYRTAQRSTLCDHMRTHTGEKPYMCGECGYRAAQKAHLSGHMK 511
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+RTHTGEKPY CG+C +R+A L H++
Sbjct: 141 YICEECGYRTARKTHLSEHMRTHTGEKPYMCGECGYRTAWKLDLTRHMR 189
Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT ++C C Y + + H++THTGEKPY C QC + +A L H+
Sbjct: 482 MRTHTGEKPYMCGECGYRAAQKAHLSGHMKTHTGEKPYKCDQCDYSAARKCNLDKHI 538
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++T F+C C Y + + HIRTHTGE+PY C QC + +A + L+ H +
Sbjct: 75 MKTHKGEKSFMCAECGYGTATKSDLVVHIRTHTGERPYKCDQCDYSAARKSTLNEHQR 132
Score = 43.5 bits (101), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H H+GEKPY CG+C +R+A + L H++
Sbjct: 435 YKCDQCDYSASRKSTLDDHKAKHSGEKPYMCGECGYRTAQRSTLCDHMR 483
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 45/109 (41%), Gaps = 8/109 (7%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHC--RTC-----KSMIRTDPFRHK 147
C C Y N SPF + KA S + C RT +RT
Sbjct: 263 CDQCDYSAAQKVNLQKSPFGDH-KAKHSGEKPYMCGECGYRTAHKSDLSQHMRTHTGEKP 321
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H HTG+KPY CG+C +R+ + L H++
Sbjct: 322 YKCDQCDYSAAWRTALVRHKAKHTGDKPYMCGKCGYRTTQKSDLSLHMR 370
Score = 42.7 bits (99), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
++C C Y + + H+RTHTGEKPY C QC + +A L
Sbjct: 233 YMCGECGYRTAQKSDLSQHMRTHTGEKPYKCDQCDYSAAQKVNL 276
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+RTHTGEKPY C QC + +A L H K
Sbjct: 294 YMCGECGYRTAHKSDLSQHMRTHTGEKPYKCDQCDYSAAWRTALVRHKAK 343
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 10/84 (11%)
Query: 121 LSTNLNELIEHCRTCK--SMIRTDPFRHK--------FVCYACDYFSYNIGCMRSHIRTH 170
+ T+ E C C + RT RHK ++C C Y + + H+RTH
Sbjct: 313 MRTHTGEKPYKCDQCDYSAAWRTALVRHKAKHTGDKPYMCGKCGYRTTQKSDLSLHMRTH 372
Query: 171 TGEKPYACGQCAFRSASVAGLHYH 194
TGEKP+ C QC + +A + L H
Sbjct: 373 TGEKPFKCDQCDYSAAQKSNLKVH 396
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGC-MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CD FS + C + H HTGEKPY CG+C +R+A L H+K
Sbjct: 19 VRTHTGERPYKCDQCD-FSAAVKCTLNVHKAQHTGEKPYICGECDYRTAIKTHLSRHMK 76
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
IRT + C CDY + + H R H+GEKPY C +C +R+A L H++
Sbjct: 103 IRTHTGERPYKCDQCDYSAARKSTLNEHQRARHSGEKPYICEECGYRTARKTHLSEHMR 161
Score = 39.3 bits (90), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Query: 148 FVCYACDYFSYNIGCMRSHIR-----THTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + HI THTG+KPY CG+C FR+ L H++
Sbjct: 519 YKCDQCDYSAARKCNLDKHIAAKHSTTHTGDKPYMCGECGFRTVKKNDLSRHMR 572
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HTGE+PY C QC + ++ + L H K
Sbjct: 407 YMCGECGYRAVTKSQLSKHMRIHTGERPYKCDQCDYSASRKSTLDDHKAK 456
Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 73/196 (37%), Gaps = 33/196 (16%)
Query: 25 RTNITSDVYIAVLVFSNLTFFITAQLVLMSLDQILNLNLSVLLVTTIPTQNHS--LCKHC 82
RT SD+ + + + Q S Q +NL S +C C
Sbjct: 241 RTAQKSDLSQHMRTHTGEKPYKCDQCDY-SAAQKVNLQKSPFGDHKAKHSGEKPYMCGEC 299
Query: 83 HSQLSHL-DLLDH-----------CKTCSY-------MIRPNANNTFS-PF-CIYCKAVL 121
+ +H DL H C C Y ++R A +T P+ C C
Sbjct: 300 GYRTAHKSDLSQHMRTHTGEKPYKCDQCDYSAAWRTALVRHKAKHTGDKPYMCGKC-GYR 358
Query: 122 STNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQ 180
+T ++L H +RT F C CDY + ++ H H +KPY CG+
Sbjct: 359 TTQKSDLSLH-------MRTHTGEKPFKCDQCDYSAAQKSNLKVHKEAKHASKKPYMCGE 411
Query: 181 CAFRSASVAGLHYHLK 196
C +R+ + + L H++
Sbjct: 412 CGYRAVTKSQLSKHMR 427
Score = 36.6 bits (83), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
+C C + + + ++RTHTGE+PY C QC F +A
Sbjct: 1 MCGECGFRTSRKSHLSEYVRTHTGERPYKCDQCDFSAA 38
>gi|260795603|ref|XP_002592794.1| hypothetical protein BRAFLDRAFT_202033 [Branchiostoma floridae]
gi|229278018|gb|EEN48805.1| hypothetical protein BRAFLDRAFT_202033 [Branchiostoma floridae]
Length = 544
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C +G ++SH+RTHTGEKPY CGQC + + + L H++
Sbjct: 1 MRTHTGEKPYKCEECSRQFSRLGDLKSHMRTHTGEKPYKCGQCGKKFSQLGALKSHMR 58
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
KS +RT + C C +G ++SH+RTHTG+KPY C +C+ + + + L H+
Sbjct: 26 KSHMRTHTGEKPYKCGQCGKKFSQLGALKSHMRTHTGDKPYMCEECSRQFSQQSDLKTHV 85
Query: 196 K 196
+
Sbjct: 86 R 86
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C +G ++SH+RTHTGEKPY C C+ + + + L H+
Sbjct: 82 KTHVRTHTGEKPYNCEECGKKFSRLGQLKSHMRTHTGEKPYMCEDCSKQFSQLGDLKKHV 141
Query: 196 K 196
+
Sbjct: 142 R 142
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 19/120 (15%)
Query: 78 LCKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTC 135
+C+ C Q S DL H +T + P+ C C S L +L
Sbjct: 67 MCEECSRQFSQQSDLKTHVRT---------HTGEKPYNCEECGKKFS-RLGQL------- 109
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
KS +RT ++C C +G ++ H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 110 KSHMRTHTGEKPYMCEDCSKQFSQLGDLKKHVRTHTGEKPYRCEECSRQFSVLNNLKSHM 169
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C +G +++H RTHTGEKPY C +C+ + + + L H+
Sbjct: 474 KNHMRTHTGEKPYKCEECSRQFSRLGQLKNHKRTHTGEKPYRCEECSKQFSELGNLKTHM 533
Query: 196 K 196
+
Sbjct: 534 R 534
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 50/121 (41%), Gaps = 19/121 (15%)
Query: 78 LCKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTC 135
+C+ C Q S L DL H +T + P+ C C S LN L
Sbjct: 123 MCEDCSKQFSQLGDLKKHVRT---------HTGEKPYRCEECSRQFSV-LNNL------- 165
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
KS + T + C C + G + H RTHTGEKPY C +C+ + L H+
Sbjct: 166 KSHMHTHTGEKPYSCEECSRQFRHPGSLERHKRTHTGEKPYRCEECSRQFGESGALTKHM 225
Query: 196 K 196
+
Sbjct: 226 R 226
Score = 42.7 bits (99), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C + +++H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 418 KAHMRTHTGEKPYTCEECSRQFSQLWNLKTHMRTHTGEKPYKCEECSKQFSKLGDLKNHM 477
Query: 196 K 196
+
Sbjct: 478 R 478
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 55/134 (41%), Gaps = 22/134 (16%)
Query: 47 TAQLVLMSLDQILNLNLSVLLVTTIPTQNHSLCKHCHSQLSHL-DLLDHCKTCSYMIRPN 105
T + Q+ NL + T + C+ C Q S L DL +H +T
Sbjct: 431 TCEECSRQFSQLWNLKTHMRTHTG---EKPYKCEECSKQFSKLGDLKNHMRT-------- 479
Query: 106 ANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMR 164
+ P+ C C S L +L H RT P+R C C +G ++
Sbjct: 480 -HTGEKPYKCEECSRQFS-RLGQLKNHKRT---HTGEKPYR----CEECSKQFSELGNLK 530
Query: 165 SHIRTHTGEKPYAC 178
+H+RTHTGEKPY C
Sbjct: 531 THMRTHTGEKPYTC 544
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C + ++ H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 250 KTHMRTHTGEKPYRCEECSKQFSRLDSLKKHMRTHTGEKPYRCEECSRQFSKLGYLKTHI 309
Query: 196 K 196
+
Sbjct: 310 R 310
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C C S L+ L +H RT P+R C C +G +++HIR HTGE
Sbjct: 264 CEECSKQFS-RLDSLKKHMRT---HTGEKPYR----CEECSRQFSKLGYLKTHIRIHTGE 315
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
KPY C +C+ + + + L H +
Sbjct: 316 KPYRCEKCSRQFSRLDSLKIHKR 338
Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ IR + C C + ++ H RTHTGEKP+ C +C+ + + + L H+
Sbjct: 306 KTHIRIHTGEKPYRCEKCSRQFSRLDSLKIHKRTHTGEKPHKCDECSKQFSQLGDLKKHI 365
Query: 196 K 196
+
Sbjct: 366 R 366
>gi|260823028|ref|XP_002603985.1| hypothetical protein BRAFLDRAFT_71727 [Branchiostoma floridae]
gi|229289310|gb|EEN59996.1| hypothetical protein BRAFLDRAFT_71727 [Branchiostoma floridae]
Length = 402
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C+ C Y + + H+RTHTGEKPY C QC + +A L+ H+KK
Sbjct: 178 YMCWECGYRAAKRSTLSQHVRTHTGEKPYKCDQCDYSAAHRFSLNLHVKK 227
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + C CDY + + HIRTHTG+KPY C QC + +A L HL
Sbjct: 1 MRTHTGDRPYKCDQCDYSATEKYTLVKHIRTHTGDKPYKCDQCDYSAAQKWNLDQHL 57
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + H+R H+GEKPY CG+C +R+A L H++
Sbjct: 85 MRTHTGEKPYKCDLCDYSAAHKLHLDQHLRKHSGEKPYMCGECGYRAARKFTLSEHMR 142
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGEKPY C QC + +A + HL
Sbjct: 122 YMCGECGYRAARKFTLSEHMRTHTGEKPYKCDQCGYSAAQKSTFFEHL 169
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IRT + C CDY + + H+ H GEKPY CG+C +R+ L H++
Sbjct: 29 IRTHTGDKPYKCDQCDYSAAQKWNLDQHLSQHRGEKPYMCGECGYRTTVKCNLSKHMR 86
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C Y + H+ HTGEKPY C +C +R+A + L H++
Sbjct: 141 MRTHTGEKPYKCDQCGYSAAQKSTFFEHLVLHTGEKPYMCWECGYRAAKRSTLSQHVR 198
Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 148 FVCYACDYFSYNIGC-MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + C + H+RTHTGEKPY C C + +A L HL+K
Sbjct: 66 YMCGECGYRT-TVKCNLSKHMRTHTGEKPYKCDLCDYSAAHKLHLDQHLRK 115
>gi|260832466|ref|XP_002611178.1| hypothetical protein BRAFLDRAFT_88423 [Branchiostoma floridae]
gi|229296549|gb|EEN67188.1| hypothetical protein BRAFLDRAFT_88423 [Branchiostoma floridae]
Length = 218
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+R H+GEKPY CG+C FR+A + L H++
Sbjct: 140 YKCDQCDYSATQKWNLDQHLRKHSGEKPYMCGECGFRTAQKSTLSTHMR 188
Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C Y + + + H+R HTGEKPY C QC + + L HL+K
Sbjct: 112 YKCGECGYGTAQMYHLSQHMRIHTGEKPYKCDQCDYSATQKWNLDQHLRK 161
Score = 43.1 bits (100), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL-HYHLKK 197
++C C Y + + H+RTHTGEKP+ C QC + S + L +HL K
Sbjct: 55 YMCGECGYRTVQKSTLSQHMRTHTGEKPHKCNQCDYTSVRKSSLARHHLAK 105
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCM-RSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT C CDY S + R H+ HT EKPY CG+C + +A + L H++
Sbjct: 74 MRTHTGEKPHKCNQCDYTSVRKSSLARHHLAKHTAEKPYKCGECGYGTAQMYHLSQHMR 132
Score = 36.6 bits (83), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 170 HTGEKPYACGQCAFRSASVAGLHYHLK 196
HTGEKPY CG+C +R+ + L H++
Sbjct: 49 HTGEKPYMCGECGYRTVQKSTLSQHMR 75
>gi|328720446|ref|XP_001946486.2| PREDICTED: zinc finger protein 567-like [Acyrthosiphon pisum]
Length = 557
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 113 FCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTG 172
F ++ ++ L+T LI H RT + +VCY CD N G + H RTHTG
Sbjct: 327 FNVWGQSFLNTR--NLIRHKRTHTG-------KKSYVCYVCDRSFSNTGNLTRHKRTHTG 377
Query: 173 EKPYACGQCAFRSASVAGLHYHLK 196
EKPYAC C + L H++
Sbjct: 378 EKPYACNVCDQSFSQKGNLVIHIR 401
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAG 190
RT + C CD G + +H RTHTGEKPY+C C RS S G
Sbjct: 485 RTHTGEKPYACDVCDQSFPQKGSLVTHKRTHTGEKPYSCKVCG-RSFSQQG 534
Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 24/55 (43%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
RT + C CD G + HIRTHTGEKPY C C + L H
Sbjct: 373 RTHTGEKPYACNVCDQSFSQKGNLVIHIRTHTGEKPYVCNVCDLSFSQKGNLVIH 427
Score = 36.2 bits (82), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
IRT +VC CD G + H THTGE+PY+C C
Sbjct: 400 IRTHTGEKPYVCNVCDLSFSQKGNLVIHKITHTGEQPYSCNVCG 443
>gi|321470816|gb|EFX81791.1| zinc finger protein-like protein [Daphnia pulex]
Length = 626
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 13/90 (14%)
Query: 114 CIYC-KAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTG 172
C YC K VL + + H CKS+IR D +VC+ C N G +++H+ HTG
Sbjct: 329 CKYCQKGVLGHD--RYLYHMLMCKSLIRGD-----YVCFICRKSFRNSGSLKTHLLLHTG 381
Query: 173 EKPYACGQCAFRSASVAGLHY--HLKKTYH 200
KP+ C C SAS H+ H +++ H
Sbjct: 382 AKPFPCNYC---SASFRQRHHRSHHERSVH 408
>gi|260810837|ref|XP_002600129.1| hypothetical protein BRAFLDRAFT_276371 [Branchiostoma floridae]
gi|229285415|gb|EEN56141.1| hypothetical protein BRAFLDRAFT_276371 [Branchiostoma floridae]
Length = 214
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 20/139 (14%)
Query: 60 NLNLSVLLVTTIPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKA 119
NLN+ + T SLC + +Q HLD ++ + + C C
Sbjct: 70 NLNVHMRQHTGEMPYKCSLCDYAAAQKGHLD--------QHLFKHTGEKPYE--CEECD- 118
Query: 120 VLSTNLNE-LIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAC 178
+T++ + LI H + I T HK C CDY + C+ +H+ HTGEKP+AC
Sbjct: 119 -FTTHVKKSLINHVK-----IHTGEKPHK--CDLCDYSALRKSCLEAHMTKHTGEKPFAC 170
Query: 179 GQCAFRSASVAGLHYHLKK 197
C +R+A + L H+K+
Sbjct: 171 KDCEYRAADKSNLTQHMKR 189
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CD+ + ++ H+ HTGEKPY C +C +R+A A L+ H+++
Sbjct: 28 YKCDKCDFAALRKRTLKRHMAKHTGEKPYLCEKCGYRTAYPANLNVHMRQ 77
Score = 37.0 bits (84), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 28/63 (44%)
Query: 133 RTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLH 192
RT K + ++C C Y + + H+R HTGE PY C C + +A L
Sbjct: 41 RTLKRHMAKHTGEKPYLCEKCGYRTAYPANLNVHMRQHTGEMPYKCSLCDYAAAQKGHLD 100
Query: 193 YHL 195
HL
Sbjct: 101 QHL 103
>gi|260829935|ref|XP_002609917.1| hypothetical protein BRAFLDRAFT_60196 [Branchiostoma floridae]
gi|229295279|gb|EEN65927.1| hypothetical protein BRAFLDRAFT_60196 [Branchiostoma floridae]
Length = 212
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + +R H+R HTGEKPY CG+C F +A + L H K+
Sbjct: 61 YMCGECGYRTVDGSSLRRHMRKHTGEKPYLCGECGFMTADSSSLSAHAKQ 110
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C CDY + + H+ HTGEKPY CG+C +R + + L H+K+
Sbjct: 117 FKCPQCDYSALLKSHLDRHMLKHTGEKPYMCGECGYRFSDRSSLARHMKR 166
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C++ ++ + H+ H GEKPY CG+C +R+ + L H++K
Sbjct: 33 YKCDRCEFCTHWKKNLTQHMARHNGEKPYMCGECGYRTVDGSSLRRHMRK 82
Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
+VC C Y +Y + H+R HT EKPY C +C F
Sbjct: 5 YVCQQCGYRTYKNSRLSEHMRKHTHEKPYKCDRCEF 40
Score = 35.8 bits (81), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + + +H + HTGEKP+ C QC + + + L H+ K
Sbjct: 89 YLCGECGFMTADSSSLSAHAKQHTGEKPFKCPQCDYSALLKSHLDRHMLK 138
>gi|402882167|ref|XP_003904622.1| PREDICTED: transcriptional repressor CTCFL isoform 3 [Papio anubis]
Length = 617
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H +T K+ +F C C Y M +HIRTHTGE
Sbjct: 414 CRYCSAVFHERY-ALIQHQKTHKN-------EKRFKCEHCSYACKQERHMTAHIRTHTGE 465
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KP+ C C FR + +H+ + YH
Sbjct: 466 KPFTCLSCNKCFRQKQLLNVHF---RKYH 491
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 328 TSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 387
Query: 190 GLHYHLK 196
L H++
Sbjct: 388 KLKRHMR 394
Score = 39.7 bits (91), Expect = 0.69, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 129 IEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSA 186
+E ++ K+ +T + F C C + S + H++THT EKP+ C C FR+
Sbjct: 242 VEKAKSTKNQRKTKGAKRTFHCDVCMFTSSRMSSFNRHMKTHTNEKPHLCHLCLKTFRTV 301
Query: 187 SVAGLH 192
++ H
Sbjct: 302 TLLRNH 307
Score = 36.2 bits (82), Expect = 7.8, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKTY 199
+C+ C + +R+H+ THTG +PY C C AF ++ H K T+
Sbjct: 290 LCHLCLKTFRTVTLLRNHVNTHTGTRPYKCNDCNMAFVTSGELVRHRRYKHTH 342
>gi|358332783|dbj|GAA51399.1| zinc finger and SCAN domain-containing protein 5B [Clonorchis
sinensis]
Length = 1225
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 33/67 (49%)
Query: 130 EHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
E ++ IRT + C C +R+HIRTHTGEKPY C QC A +
Sbjct: 1155 ERKDNLQAHIRTHTGERPYPCRYCPKAFPQKDHLRAHIRTHTGEKPYRCPQCMKAFAQLG 1214
Query: 190 GLHYHLK 196
LH H+K
Sbjct: 1215 NLHRHVK 1221
>gi|260811179|ref|XP_002600300.1| hypothetical protein BRAFLDRAFT_66801 [Branchiostoma floridae]
gi|229285586|gb|EEN56312.1| hypothetical protein BRAFLDRAFT_66801 [Branchiostoma floridae]
Length = 412
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
I+ P + + C CD+ S C+ +H+ HTGEKP+ CG+C R+ + + L H++
Sbjct: 219 IKKHPAKKPYKCKKCDFSSARKRCLATHMLRHTGEKPFMCGECGHRTVTKSDLAKHMR 276
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 10/99 (10%)
Query: 99 SYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSY 158
++M+R F C C T ++L +H RT T HK C CD+ S
Sbjct: 245 THMLRHTGEKPF--MCGECGHRTVTK-SDLAKHMRT-----HTGEKPHK--CDQCDFASA 294
Query: 159 NIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+R H+ H GEKP+ CG+C +R+ L H+K+
Sbjct: 295 CKDRLRRHMFKHGGEKPFQCGECGYRAIDRFDLSMHMKR 333
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 137 SMIRTDPFRHK------FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAG 190
S+++T +HK FVC C Y + ++ + HI+ H +KPY C +C F SA
Sbjct: 183 SLVKTGLNKHKTKRTKRFVCGECGYRTVSMSYLNKHIKKHPAKKPYKCKKCDFSSARKRC 242
Query: 191 LHYHL 195
L H+
Sbjct: 243 LATHM 247
Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C CD+ S + H+ HT KPY CG+C +++ L H+KK
Sbjct: 340 FKCDQCDFSSAWKRSLARHMLVHTENKPYMCGECEYKTTVKNYLTKHMKK 389
>gi|260810735|ref|XP_002600105.1| hypothetical protein BRAFLDRAFT_203949 [Branchiostoma floridae]
gi|229285391|gb|EEN56117.1| hypothetical protein BRAFLDRAFT_203949 [Branchiostoma floridae]
Length = 447
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKT 198
+RT + C CDY S ++ HI HTG+KPY CG+C +R A ++ L H+K+
Sbjct: 81 MRTHTGEKPYKCDQCDYSSARKNDLKRHIARHTGDKPYQCGECGYRLADMSCLRKHIKRK 140
Query: 199 Y 199
+
Sbjct: 141 H 141
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C CDY + ++ H+ HTG KPY CG+C +R+A+ + L H++K
Sbjct: 219 YMCGECDYSAAQEYSLKRHMAKHTGVKPYMCGECGYRTANRSSLTLHMRK 268
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CDY + + H+ HTGEKP+ CG+C +R+A + L HL+
Sbjct: 389 FNCELCDYSTVRKDNLSRHVTLHTGEKPFMCGECGYRTADRSSLTVHLR 437
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + +R H+ HTG+KPY CG+C +R+ + + L H+ K
Sbjct: 275 YKCDKCDYSAAQECNLRRHMANHTGDKPYMCGECGYRTTTKSYLTTHMTK 324
Score = 43.1 bits (100), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C Y + H+RTHTGEKPY C QC + SA L H+ +
Sbjct: 62 LMCGECGYRTAQRSHFSEHMRTHTGEKPYKCDQCDYSSARKNDLKRHIAR 111
Score = 42.7 bits (99), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + N + H+R HTGEKPY C +C + +A L H+
Sbjct: 247 YMCGECGYRTANRSSLTLHMRKHTGEKPYKCDKCDYSAAQECNLRRHM 294
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+F C C Y + + H RTHTGEKPY C QC F +A H+ K
Sbjct: 5 RFACRKCHYSTTLKKSILRHARTHTGEKPYKCDQCDFSAARKDCFDQHMAK 55
Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
IR + C CDY + ++ H+ HTG KPY CG+C + +A L H+ K
Sbjct: 182 IRKHAGEKPYKCDKCDYSAAQEYNLKRHMAKHTGVKPYMCGECDYSAAQEYSLKRHMAK 240
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
VC CD+ + + HIR H GEKPY C +C + +A L H+ K
Sbjct: 164 VCADCDFGTDSKSDFVKHIRKHAGEKPYKCDKCDYSAAQEYNLKRHMAK 212
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + +H+ HTGEKPY C QC + +A L H+
Sbjct: 303 YMCGECGYRTTTKSYLTTHMTKHTGEKPYKCDQCEYSTARKDDLSRHV 350
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RT + C CD+ + C H+ HTG+K CG+C +R+A + H++
Sbjct: 25 ARTHTGEKPYKCDQCDFSAARKDCFDQHMAKHTGDKLLMCGECGYRTAQRSHFSEHMR 82
Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 148 FVCYACDYFSYNIGCMRSHI-RTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C+Y + + H+ HTG+KPY C +C FR+ L+ H++
Sbjct: 331 YKCDQCEYSTARKDDLSRHVANKHTGDKPYTCCECGFRTGDKTTLYRHMR 380
>gi|260791315|ref|XP_002590685.1| hypothetical protein BRAFLDRAFT_89486 [Branchiostoma floridae]
gi|229275881|gb|EEN46696.1| hypothetical protein BRAFLDRAFT_89486 [Branchiostoma floridae]
Length = 158
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + HI THTG+KPY CG+C +R+A + L H++
Sbjct: 84 YKCDQCDYSAAKKSTLDQHIATHTGDKPYMCGECGYRTAVRSNLSRHMR 132
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSAS 187
++C C Y + + H+RTHTG+KPY C QC + +A
Sbjct: 112 YMCGECGYRTAVRSNLSRHMRTHTGDKPYKCDQCDYSAAD 151
>gi|261289459|ref|XP_002604705.1| hypothetical protein BRAFLDRAFT_80325 [Branchiostoma floridae]
gi|229290034|gb|EEN60716.1| hypothetical protein BRAFLDRAFT_80325 [Branchiostoma floridae]
Length = 207
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + +F C CDY + + H+ HTG+KPY CG+C +R+A + L H++
Sbjct: 74 MRTHTGKKQFKCDQCDYSAARRSNLNRHLAEHTGDKPYMCGECGYRAARKSNLSDHMR 131
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A HL K
Sbjct: 111 YMCGECGYRAARKSNLSDHMRTHTGEKPYKCDQCDYSAAHKKSFDLHLAK 160
Score = 39.3 bits (90), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Query: 104 PNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCM 163
P + SP + C ST T S ++ ++C C Y + +
Sbjct: 12 PQSCGDGSPTRVLCVRDASTTDKPTARQ-STSASQTESNTDAKPYMCGECGYRTAWESTL 70
Query: 164 RSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
H+RTHTG+K + C QC + +A + L+ HL
Sbjct: 71 SRHMRTHTGKKQFKCDQCDYSAARRSNLNRHL 102
Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HT +KPY CG+C +R+ + L H++
Sbjct: 130 MRTHTGEKPYKCDQCDYSAAHKKSFDLHLAKHTCDKPYMCGECGYRTTLKSLLSRHMR 187
>gi|297677162|ref|XP_002816475.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 40 [Pongo
abelii]
Length = 2714
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 106 ANNTFSP-FCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH--KFVCYACDYFSYNIGC 162
AN+T SP IY +++ +N+ +E + C +++ + K++C C+
Sbjct: 363 ANSTQSPPMPIYNSTHVASVVNQSVE--QMCNLLLKDQKPKKQGKYICEYCNRACAKPSV 420
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ HIR+HTGE+PY C C F + + L+ H K H
Sbjct: 421 LLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAH 458
Score = 44.3 bits (103), Expect = 0.028, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 2081 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 2136
>gi|328725851|ref|XP_003248641.1| PREDICTED: transcriptional repressor CTCFL-like, partial
[Acyrthosiphon pisum]
Length = 383
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 105 NANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCM 163
N + P+ C C + +T+ EL+ H R T HK C CDY S + M
Sbjct: 35 NTHTGTKPYQCRSCPSAFTTS-GELVRHVR----YKHTHEKPHK--CTICDYASVELSKM 87
Query: 164 RSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R+H+R HTGE+PY C C + S L HL+
Sbjct: 88 RNHMRCHTGERPYQCPHCTYASPDTFKLKRHLR 120
>gi|260823002|ref|XP_002603972.1| hypothetical protein BRAFLDRAFT_71740 [Branchiostoma floridae]
gi|229289297|gb|EEN59983.1| hypothetical protein BRAFLDRAFT_71740 [Branchiostoma floridae]
Length = 512
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
I T + + C CDY + + H+R HTGEKPY CG+C +R+A + L H++
Sbjct: 422 ISTHTGKKPYRCDQCDYSAAKKFDLDKHVRKHTGEKPYMCGECGYRAAQRSTLSRHMR 479
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + G + H+ H+GEKPY CG+C +R+A + L H++
Sbjct: 254 MRTHTGEKPYKCDQCDYSASEKGHLNQHLMKHSGEKPYMCGECGYRAARKSHLSKHIR 311
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + H+ HTGEKPY CG+C FR+ L H++
Sbjct: 198 MRTHTGERPYKCDQCDYSAAHKSTLDEHLTKHTGEKPYMCGECGFRTTYKESLSRHMR 255
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H HTGEKPY CG+C +R+A + L H++
Sbjct: 319 YKCDQCDYSAAQKSQLNKHQVKHTGEKPYMCGECGYRTAYKSDLSKHMR 367
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 148 FVCYACDYF-SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y +Y G R H+RTHTGE+PY C QC + +A + L HL K
Sbjct: 179 YMCGECGYRTAYKSGLSR-HMRTHTGERPYKCDQCDYSAAHKSTLDEHLTK 228
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + + HIR HTGEKPY C QC + +A + L+ H
Sbjct: 291 YMCGECGYRAARKSHLSKHIRIHTGEKPYKCDQCDYSAAQKSQLNKH 337
Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H+RTHTGEKPY C QC + ++ L+ HL K
Sbjct: 235 YMCGECGFRTTYKESLSRHMRTHTGEKPYKCDQCDYSASEKGHLNQHLMK 284
Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G M H+ HT EKPY CG+C +R+A +GL H++
Sbjct: 164 GNMERHVVEHTSEKPYMCGECGYRTAYKSGLSRHMR 199
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
++C C Y + + H+RTHTGEKPY C QC +
Sbjct: 459 YMCGECGYRAAQRSTLSRHMRTHTGEKPYKCDQCDY 494
Score = 39.7 bits (91), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
++C C Y + + H+R HTGEKPY C QC + +A
Sbjct: 347 YMCGECGYRTAYKSDLSKHMRIHTGEKPYKCDQCDYSAA 385
Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C Y + + HI THTG+KPY C QC + +A L H++K
Sbjct: 404 ICENCAYRAAQKCDLSRHISTHTGKKPYRCDQCDYSAAKKFDLDKHVRK 452
>gi|118405052|ref|NP_001072898.1| PR domain containing 12 [Xenopus (Silurana) tropicalis]
gi|110645422|gb|AAI18859.1| PR domain containing 12 [Xenopus (Silurana) tropicalis]
Length = 354
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 67/172 (38%), Gaps = 28/172 (16%)
Query: 34 IAVLVFSNLTFFITAQLVLMSLDQIL-----NLNLSVLLVTTIPTQNHSLCKHCHSQLSH 88
+ V+ N TF+ + + DQ L N + L + +P K H +
Sbjct: 175 LEVVQIGNSTFYKATETI--PPDQELLVWYGNFPNTFLGIPGVPGMEEEQKKSKHEEFGS 232
Query: 89 LDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKF 148
+D++ T + +R C+ C ++ N +S +R F
Sbjct: 233 VDVV---PTMTGRMR----------CVICHRGFNSRSN--------LRSHMRIHTLDKPF 271
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
VC C+ +R+H+R HTGE+PY C C + +AGL H K H
Sbjct: 272 VCRFCNRRFSQSSTLRNHVRLHTGERPYKCQVCQSAYSQLAGLRAHQKSARH 323
>gi|242022342|ref|XP_002431599.1| zinc finger protein, putative [Pediculus humanus corporis]
gi|212516907|gb|EEB18861.1| zinc finger protein, putative [Pediculus humanus corporis]
Length = 785
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 11/89 (12%)
Query: 112 PFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHI 167
P C Y S L++L H R C + R P++H C CDY S + +R+H
Sbjct: 342 PECDYA----SVELSKLKRHIR-CHTGER--PYQHTHEKPHKCSLCDYASVELSKLRNHF 394
Query: 168 RTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R HTGE+PY C C + S L HL+
Sbjct: 395 RCHTGERPYQCQHCTYASPDTFKLKRHLR 423
Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 23/47 (48%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+ C C Y S + ++ H+R HTGEKPY C C R L H
Sbjct: 403 YQCQHCTYASPDTFKLKRHLRIHTGEKPYECEICHSRFTQSNSLKAH 449
>gi|158819042|ref|NP_001103644.1| transcriptional repressor CTCFL [Sus scrofa]
gi|147223335|emb|CAN13249.1| CCCTC-binding factor (zinc finger protein)-like [Sus scrofa]
gi|147223433|emb|CAN13126.1| CCCTC-binding factor (zinc finger protein)-like [Sus scrofa]
Length = 647
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 43/89 (48%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC A LI+H +T K+ +F C C Y M H+RTHTGE
Sbjct: 459 CRYCSATFHERY-ALIQHQKTHKN-------EKRFKCEHCSYACKQERHMTVHVRTHTGE 510
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KP+AC C FR + L+ HLKK YH
Sbjct: 511 KPFACLSCDKCFRQKQL--LNVHLKK-YH 536
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ HIR+HTGE+P+ C C++ S
Sbjct: 323 TSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHIRSHTGERPFQCPLCSYASKDTY 382
Query: 190 GLHYHLK 196
L H++
Sbjct: 383 KLKRHMR 389
Score = 44.3 bits (103), Expect = 0.026, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 357 KRHIRSHTGERPFQCPLCSYASKDTYKLKRHMRTHSGEKPYECHICHARFTQSGTMKIHV 416
Score = 40.8 bits (94), Expect = 0.35, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLK 196
++T VC+ C + +R+HI THTG +PY CG C AF ++ H K
Sbjct: 275 MKTHTSEKPHVCHLCLKAFRTVTLLRNHINTHTGTRPYKCGDCDMAFVTSGELVRHRRYK 334
Query: 197 KTY 199
T+
Sbjct: 335 HTH 337
Score = 40.0 bits (92), Expect = 0.59, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 129 IEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSA 186
+E S +T + F C C + S + H++THT EKP+ C C AFR+
Sbjct: 237 VEKADETHSQKKTKEVKRTFQCDICVFTSSRMSSFNRHMKTHTSEKPHVCHLCLKAFRTV 296
Query: 187 SVAGLH 192
++ H
Sbjct: 297 TLLRNH 302
>gi|426351615|ref|XP_004043327.1| PREDICTED: zinc finger protein 40 [Gorilla gorilla gorilla]
Length = 2718
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 106 ANNTFSP-FCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH--KFVCYACDYFSYNIGC 162
AN+T SP IY +++ +N+ +E + C +++ + K++C C+
Sbjct: 363 ANSTQSPPMPIYNSTHVASVVNQSVE--QMCNLLLKDQKPKKQGKYICEYCNRACAKPSV 420
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ HIR+HTGE+PY C C F + + L+ H K H
Sbjct: 421 LLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAH 458
Score = 44.3 bits (103), Expect = 0.029, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 2085 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 2140
>gi|260814526|ref|XP_002601966.1| hypothetical protein BRAFLDRAFT_228315 [Branchiostoma floridae]
gi|229287269|gb|EEN57978.1| hypothetical protein BRAFLDRAFT_228315 [Branchiostoma floridae]
Length = 581
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 34/50 (68%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y +++ + SH++ HTGEKPY CG+C +R+A + L H+K+
Sbjct: 348 YMCGECGYRTHHKSTLASHMKIHTGEKPYKCGECGYRTAFKSALSSHMKR 397
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H HTGEKPY CG+C FR+ + L H+K
Sbjct: 208 YKCDQCDYCTVRKSALDGHKVKHTGEKPYMCGECGFRTGQRSSLSCHMK 256
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 26/49 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY S + H H+ EKPY CG+C FR+ A L H+K
Sbjct: 152 YKCDQCDYCSAWKWDLDRHRVKHSNEKPYMCGECGFRTGHRAALSSHMK 200
Score = 39.7 bits (91), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 148 FVCYACDYFS-YNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + Y G + H+ HTGEKPY C +C F +A L HL K
Sbjct: 434 YMCGQCGFKTDYKKGQLEQHMTVHTGEKPYMCDRCGFCTAWKGHLDRHLAK 484
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + + H +THTGEKPY C QC + SA L H
Sbjct: 124 YICAECGYQAAVKSRLSRHAKTHTGEKPYKCDQCDYCSAWKWDLDRH 170
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++ C CD+ + + H THT EKPY CG+C +R+ + L H+K
Sbjct: 319 QYKCDQCDFCTVEKLALNRHKVTHTSEKPYMCGECGYRTHHKSTLASHMK 368
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CD+ + + H H+ EKPY CG+C FR+ + L H+K
Sbjct: 264 YKCDQCDFCTAWKRDLDRHRVKHSNEKPYMCGECGFRTGHRSALSRHMK 312
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CD+ + + HI HTG+KPY C C F +A A L H+KK
Sbjct: 491 YKCDQCDFCTARKEQLDLHIAEHTGKKPYTCEYCGFMTAIRAHLSSHMKK 540
Score = 36.6 bits (83), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C + + + H++ HTGEKPY C QC F +A L H
Sbjct: 236 YMCGECGFRTGQRSSLSCHMKLHTGEKPYKCDQCDFCTAWKRDLDRH 282
>gi|410348332|gb|JAA40770.1| human immunodeficiency virus type I enhancer binding protein 1 [Pan
troglodytes]
Length = 2718
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 102 IRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH--KFVCYACDYFSYN 159
I P + P IY +++ +N+ +E + C +++ + K++C C+
Sbjct: 360 ISPANSTQSPPMPIYNSTHVASVVNQSVE--QMCNLLLKDQKPKKQGKYICEYCNRACAK 417
Query: 160 IGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ HIR+HTGE+PY C C F + + L+ H K H
Sbjct: 418 PSVLLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAH 458
Score = 44.3 bits (103), Expect = 0.029, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 2085 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 2140
>gi|410266394|gb|JAA21163.1| human immunodeficiency virus type I enhancer binding protein 1 [Pan
troglodytes]
Length = 2718
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 102 IRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH--KFVCYACDYFSYN 159
I P + P IY +++ +N+ +E + C +++ + K++C C+
Sbjct: 360 ISPANSTQSPPMPIYNSTHVASVVNQSVE--QMCNLLLKDQKPKKQGKYICEYCNRACAK 417
Query: 160 IGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ HIR+HTGE+PY C C F + + L+ H K H
Sbjct: 418 PSVLLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAH 458
Score = 44.3 bits (103), Expect = 0.029, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 2085 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 2140
>gi|410226374|gb|JAA10406.1| human immunodeficiency virus type I enhancer binding protein 1 [Pan
troglodytes]
Length = 2718
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 102 IRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH--KFVCYACDYFSYN 159
I P + P IY +++ +N+ +E + C +++ + K++C C+
Sbjct: 360 ISPANSTQSPPMPIYNSTHVASVVNQSVE--QMCNLLLKDQKPKKQGKYICEYCNRACAK 417
Query: 160 IGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ HIR+HTGE+PY C C F + + L+ H K H
Sbjct: 418 PSVLLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAH 458
Score = 44.3 bits (103), Expect = 0.029, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 2085 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 2140
>gi|402882169|ref|XP_003904623.1| PREDICTED: transcriptional repressor CTCFL isoform 4 [Papio anubis]
Length = 666
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H +T K+ +F C C Y M +HIRTHTGE
Sbjct: 464 CRYCSAVFHERY-ALIQHQKTHKN-------EKRFKCEHCSYACKQERHMTAHIRTHTGE 515
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KP+ C C FR + +H+ + YH
Sbjct: 516 KPFTCLSCNKCFRQKQLLNVHF---RKYH 541
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 328 TSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 387
Query: 190 GLHYHLK 196
L H++
Sbjct: 388 KLKRHMR 394
Score = 44.3 bits (103), Expect = 0.030, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +R+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 362 KRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEKPYECHICHTRFTQSGTMKIHI 421
Score = 39.3 bits (90), Expect = 0.79, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 129 IEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSA 186
+E ++ K+ +T + F C C + S + H++THT EKP+ C C FR+
Sbjct: 242 VEKAKSTKNQRKTKGAKRTFHCDVCMFTSSRMSSFNRHMKTHTNEKPHLCHLCLKTFRTV 301
Query: 187 SVAGLH 192
++ H
Sbjct: 302 TLLRNH 307
Score = 36.2 bits (82), Expect = 8.5, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKTY 199
+C+ C + +R+H+ THTG +PY C C AF ++ H K T+
Sbjct: 290 LCHLCLKTFRTVTLLRNHVNTHTGTRPYKCNDCNMAFVTSGELVRHRRYKHTH 342
>gi|312380018|gb|EFR26134.1| hypothetical protein AND_07994 [Anopheles darlingi]
Length = 870
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C CK + S N L +H +T I+ F+C C Y + + H+R H+GE
Sbjct: 650 CPTCKHLFS-NSKILSKHIKTVHHKIK------PFICNVCGYKAARKYTLTIHMRQHSGE 702
Query: 174 KPYACGQCAFRSASVAGLHYH 194
KP +C C FR+A + L++H
Sbjct: 703 KPLSCQLCPFRTADPSALYHH 723
>gi|260781017|ref|XP_002585625.1| hypothetical protein BRAFLDRAFT_111667 [Branchiostoma floridae]
gi|229270643|gb|EEN41636.1| hypothetical protein BRAFLDRAFT_111667 [Branchiostoma floridae]
Length = 611
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + SH HTGEKPY CG+C +R+A GL H+K
Sbjct: 140 YKCDQCDYSAAQKSTLVSHQANHTGEKPYMCGECGYRTARKGGLSRHMK 188
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 17/101 (16%)
Query: 114 CIYCKAVLSTNLNELIEH-------CRTC--KSMIRTDPFRH--------KFVCYACDYF 156
C Y A ST L +H CR C ++ +R++ RH F C CDY
Sbjct: 439 CDYSAAEKSTLDQHLTKHTGEKPYMCRECGYRTYLRSNLSRHMRTHTGEKPFKCDQCDYS 498
Query: 157 SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ N + H+ HTG+KPY C C + +A + L HLKK
Sbjct: 499 AGNKYSLDIHLANHTGDKPYKCDDCDYSAAQKSDLDQHLKK 539
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY CG+C +R+ A L H++
Sbjct: 369 MRTHTGEKPYKCDQCDYSAARKSHLDKHLTKHTGEKPYMCGECGYRTTQKAHLSRHMR 426
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T +RT + C CDY + + H+ HTGEKPY CG+C +R+A L
Sbjct: 14 TLSKHMRTHTGEKPYKCDQCDYSAAQKANLDLHLTKHTGEKPYMCGECGYRTARKPDLSR 73
Query: 194 HLK 196
H++
Sbjct: 74 HMR 76
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H++ HTGEKPY CG+C +R+A + L H++
Sbjct: 518 YKCDDCDYSAAQKSDLDQHLKKHTGEKPYMCGECGYRAARKSTLSEHMR 566
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C Y + + H+RTHTGEKPY C QC + +A A L HL K
Sbjct: 1 MCGECGYRTNLKSTLSKHMRTHTGEKPYKCDQCDYSAAQKANLDLHLTK 49
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ H+GEKPY CG+C +R+A L H++
Sbjct: 75 MRTHTGEKPYKCDQCDYTAARKSYLDDHMTKHSGEKPYMCGECGYRTARKFNLSLHMR 132
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + + + L+ H+ K
Sbjct: 546 YMCGECGYRAARKSTLSEHMRTHTGEKPYKCDQCDYSAGRKSSLNKHMTK 595
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RT + C CDY + + H+ HTGEKPY CG+C +R+A + L H +
Sbjct: 230 RTHTSDKPYKCDQCDYSAAGKSALDYHLSKHTGEKPYKCGECGYRTALRSDLSKHAR 286
Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 121 LSTNLNELIEHCRTC--KSMIRTDPFRHK--------FVCYACDYFSYNIGCMRSHIRTH 170
LS + E C C ++ +R+D +H + C CDY + + H+ H
Sbjct: 257 LSKHTGEKPYKCGECGYRTALRSDLSKHARIHTGEKPYKCDQCDYAAARKSHLDDHLTKH 316
Query: 171 TGEKPYACGQCAFRSASVAGLHYHL 195
TGEKPY CG+C +R+ + L H+
Sbjct: 317 TGEKPYMCGECGYRTTRQSYLSKHM 341
Score = 45.1 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+I T + H +C C Y + + H+RTHTGEKPY C QC + +A + L HL K
Sbjct: 342 IIHTGEYPH--MCGKCGYRAAYKSNLSIHMRTHTGEKPYKCDQCDYSAARKSHLDKHLTK 399
Score = 43.9 bits (102), Expect = 0.034, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H RTHT +KPY C QC + +A + L YHL K
Sbjct: 210 YMCGECGFRTKQKSDLSIHKRTHTSDKPYKCDQCDYSAAGKSALDYHLSK 259
Score = 43.9 bits (102), Expect = 0.034, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A + L H+ K
Sbjct: 56 YMCGECGYRTARKPDLSRHMRTHTGEKPYKCDQCDYTAARKSYLDDHMTK 105
Score = 40.4 bits (93), Expect = 0.36, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C Y + + H R HTGEKPY C QC + +A + L HL K
Sbjct: 266 YKCGECGYRTALRSDLSKHARIHTGEKPYKCDQCDYAAARKSHLDDHLTK 315
Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + + H+R HTG+KPY C QC + +A + L H
Sbjct: 112 YMCGECGYRTARKFNLSLHMRIHTGDKPYKCDQCDYSAAQKSTLVSH 158
Score = 36.6 bits (83), Expect = 5.2, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 15/66 (22%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTG--------------EKPYACGQCAFRSASVAGLHY 193
++C C Y + G + H++TH+ EKPY CG+C FR+ + L
Sbjct: 168 YMCGECGYRTARKGGLSRHMKTHSAKLEHGESNMPELNTEKPYMCGECGFRTKQKSDLSI 227
Query: 194 HLKKTY 199
H K+T+
Sbjct: 228 H-KRTH 232
>gi|332823328|ref|XP_003311156.1| PREDICTED: zinc finger protein 40 [Pan troglodytes]
Length = 2718
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 106 ANNTFSP-FCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH--KFVCYACDYFSYNIGC 162
AN+T SP IY +++ +N+ +E + C +++ + K++C C+
Sbjct: 363 ANSTQSPPMPIYNSTHVASVVNQSVE--QMCNLLLKDQKPKKQGKYICEYCNRACAKPSV 420
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ HIR+HTGE+PY C C F + + L+ H K H
Sbjct: 421 LLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAH 458
Score = 44.3 bits (103), Expect = 0.030, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 2085 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 2140
>gi|328710605|ref|XP_001947703.2| PREDICTED: transcriptional repressor CTCFL-like [Acyrthosiphon
pisum]
Length = 556
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 105 NANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCM 163
N + P+ C C + +T+ EL+ H R T HK C C+Y S + M
Sbjct: 170 NTHTGTKPYNCRSCPSNFTTS-GELVRHVR----YKHTHEKPHK--CTVCNYASVELSKM 222
Query: 164 RSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R+H+R HTGE+PY C QC + S L HL+
Sbjct: 223 RNHMRCHTGERPYQCPQCTYASPDTFKLKRHLR 255
Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLK 196
F C C Y S + +H+ THT EKP+ C QC +FR + H++L+
Sbjct: 349 FKCELCSYASTFQRHLETHMLTHTDEKPFQCDQCDRSFRQQQLLRRHHNLR 399
Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
+ C C Y S + ++ H+R HTGEKPY C C
Sbjct: 235 YQCPQCTYASPDTFKLKRHLRIHTGEKPYECDIC 268
>gi|313240576|emb|CBY32905.1| unnamed protein product [Oikopleura dioica]
Length = 1127
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 143 PFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
P H + C C+Y S M H+RTH+G++PY C C + + A H+KK +
Sbjct: 346 PDVHSYQCTICNYCSLEKSLMTRHMRTHSGQRPYNCSVCGYAFTTKANCERHIKKRH 402
>gi|260781332|ref|XP_002585771.1| hypothetical protein BRAFLDRAFT_257357 [Branchiostoma floridae]
gi|229270812|gb|EEN41782.1| hypothetical protein BRAFLDRAFT_257357 [Branchiostoma floridae]
Length = 655
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 53/121 (43%), Gaps = 17/121 (14%)
Query: 79 CKHCHSQLSHLDL--LDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCK 136
C + +Q HLDL H YM +P + C Y A S L++H
Sbjct: 370 CDYSATQKFHLDLHLAKHTSDKPYMEKPYKCDQ----CDYATARKSHLDKHLLKHTG--- 422
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ ++C C Y + + + H+RTHTGEKPY C QC + +A + L HL
Sbjct: 423 --------ENPYMCGECGYRAVQMSNLSRHMRTHTGEKPYKCDQCDYSAAQKSTLDQHLA 474
Query: 197 K 197
K
Sbjct: 475 K 475
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + HI HTGEKPY CG+C FR+A + L H++
Sbjct: 585 MRTHTGEKPYKCDRCDYSAAQKRDLDRHITIHTGEKPYMCGECGFRTAHKSYLSTHMR 642
Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T +RT + C CDY + + SH+ HTGEKPY C +C +R+A L
Sbjct: 155 TLSKHMRTHTGERPYKCDQCDYSAAQKPTLDSHLAKHTGEKPYMCRECGYRTARKFNLSL 214
Query: 194 HLK 196
H++
Sbjct: 215 HMR 217
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A L HL K
Sbjct: 482 YMCEECGYRTAKKSHLSKHMRTHTGEKPYKCDQCDYSAAQKYQLDLHLAK 531
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T +RT + C CDY + + H HTGEKPY CG+C +R+A + L
Sbjct: 295 TLSKHMRTHTGEKPYKCDQCDYAAARKCNLDRHRTKHTGEKPYMCGECGYRTAHKSDLSR 354
Query: 194 HLK 196
H++
Sbjct: 355 HMR 357
Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGE+PY C QC + +A L HL K
Sbjct: 141 YMCGECGYRTARKSTLSKHMRTHTGERPYKCDQCDYSAAQKPTLDSHLAK 190
Score = 44.7 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A L H K
Sbjct: 281 YMCGECGYRAARKSTLSKHMRTHTGEKPYKCDQCDYAAARKCNLDRHRTK 330
Score = 44.7 bits (104), Expect = 0.021, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C+Y + + + H+RTHTG+KPY C QC + +A + L H+
Sbjct: 56 YMCGECEYRTAHKSDLSRHMRTHTGQKPYKCDQCDYSAAQKSDLDRHI 103
Score = 44.3 bits (103), Expect = 0.028, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+RTHTGEKPY C QC + + L HL K
Sbjct: 337 YMCGECGYRTAHKSDLSRHMRTHTGEKPYKCDQCDYSATQKFHLDLHLAK 386
Score = 44.3 bits (103), Expect = 0.029, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + + L HL K
Sbjct: 197 YMCRECGYRTARKFNLSLHMRTHTGEKPYKCDQCDYSAGRQTSLDIHLAK 246
Score = 43.5 bits (101), Expect = 0.054, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C CDY + H HTG+KPY CG+C +R+A + L H++
Sbjct: 253 YMCDQCDYVAAQKWDWDKHRTKHTGDKPYMCGECGYRAARKSTLSKHMR 301
Score = 42.7 bits (99), Expect = 0.087, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CD+ + + H HTG+KPY CG+C +R+A + L H++
Sbjct: 113 YKCDQCDFATARKSNLDRHQTKHTGDKPYMCGECGYRTARKSTLSKHMR 161
Score = 42.0 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+RTHTGEK + CG+C +R+A L H++
Sbjct: 538 YMCGECGYRTARKCDLSKHMRTHTGEKLHMCGECGYRTARKFDLSRHMR 586
Score = 41.6 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 153 CDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
CDY + + H+ HT EKPY CG+C +R+A + L H++
Sbjct: 33 CDYSAARKSHLDKHLTKHTEEKPYMCGECEYRTAHKSDLSRHMR 76
Score = 40.4 bits (93), Expect = 0.43, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
C K M RT +C C Y + + H+RTHTGEKPY C +C + +A L
Sbjct: 551 CDLSKHM-RTHTGEKLHMCGECGYRTARKFDLSRHMRTHTGEKPYKCDRCDYSAAQKRDL 609
Query: 192 HYHL 195
H+
Sbjct: 610 DRHI 613
Score = 40.4 bits (93), Expect = 0.44, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 26/49 (53%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C Y + H+RTHTGEKPY QC + +A + L HL K
Sbjct: 1 MCGECGYRVARKSDLSRHMRTHTGEKPYKSDQCDYSAARKSHLDKHLTK 49
Score = 38.1 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHT-GEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + + C CDY + + HI HT GEK Y C QC F +A + L H K
Sbjct: 75 MRTHTGQKPYKCDQCDYSAAQKSDLDRHITNHTEGEKAYKCDQCDFATARKSNLDRHQTK 134
Score = 37.4 bits (85), Expect = 3.4, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
+RT + C CDY + + H+ HTG+KPY C QC + +A
Sbjct: 216 MRTHTGEKPYKCDQCDYSAGRQTSLDIHLAKHTGDKPYMCDQCDYVAA 263
>gi|313234287|emb|CBY10354.1| unnamed protein product [Oikopleura dioica]
Length = 1138
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 143 PFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
P H + C C+Y S M H+RTH+G++PY C C + + A H+KK +
Sbjct: 362 PDVHSYQCTICNYCSLEKSLMTRHMRTHSGQRPYNCSVCGYAFTTKANCERHIKKRH 418
>gi|260810999|ref|XP_002600210.1| hypothetical protein BRAFLDRAFT_66715 [Branchiostoma floridae]
gi|229285496|gb|EEN56222.1| hypothetical protein BRAFLDRAFT_66715 [Branchiostoma floridae]
Length = 863
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + C+ H+R HTGEKP CG+C +R+A + L H K
Sbjct: 770 YMCGECGYRTSDKSCLSKHMRKHTGEKPLMCGECGYRAADRSELSRHAK 818
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT F C CDY + G + H+ + HTGEKPY CG+C +R++ + L H++K
Sbjct: 732 MRTHTGEKPFKCDQCDYSAIQKGQLDRHVLSRHTGEKPYMCGECGYRTSDKSCLSKHMRK 791
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+R P + C CDY + + H+ HTG+KPY CG+C +R+A + L H++
Sbjct: 676 MRMHPGVKPYKCDQCDYSAEYKSILGRHMVIHTGDKPYMCGECGYRTADKSALTKHMR 733
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 134 TCKSMIRTDPFRHK------FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSAS 187
+ K +R D + K +VC C Y + + C+ H+R HTGEKPY C C + SA
Sbjct: 294 SAKQKLRLDVHKAKHTGDIPYVCGECGYSTADKSCLYRHMRKHTGEKPYRCDLCDYSSAH 353
Query: 188 VAGLHYHLKK 197
L H+ +
Sbjct: 354 RISLVQHMAE 363
Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
++C C Y + N ++ H+R HTGEKPY C QC F SA
Sbjct: 398 YMCGECGYRTVNSDHLKVHMRKHTGEKPYKCEQCDFSSA 436
Score = 43.5 bits (101), Expect = 0.051, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + + H+RTHTGEKP+ C QC + + L H+
Sbjct: 713 YMCGECGYRTADKSALTKHMRTHTGEKPFKCDQCDYSAIQKGQLDRHV 760
Score = 43.1 bits (100), Expect = 0.064, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + ++ H+ H+ EKPY CG+C +R++ + + H+++
Sbjct: 136 YKCNQCDYSAAQKNNVKQHMLKHSSEKPYICGECGYRASRKSYVTAHIRR 185
Score = 43.1 bits (100), Expect = 0.071, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+R HTG KPY C QC + +A + H+ K
Sbjct: 108 YICGECGYRTAHKSSISVHMRIHTGSKPYKCNQCDYSAAQKNNVKQHMLK 157
Score = 42.0 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 143 PFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
P+R C CDY S + + H+ HTG KPY C +C +R+A L H+ +
Sbjct: 341 PYR----CDLCDYSSAHRISLVQHMAEHTGVKPYKCEECGYRTAVSCNLSRHMAR 391
Score = 41.2 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + H HTG+ PY CG+C + +A + L+ H++K
Sbjct: 286 YKCDQCDYSAKQKLRLDVHKAKHTGDIPYVCGECGYSTADKSCLYRHMRK 335
Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C++ + + H H+GEKPY CG+C +R+A + + H++
Sbjct: 80 YKCDQCEFSATQKYNLDQHKLRHSGEKPYICGECGYRTAHKSSISVHMR 128
Score = 40.0 bits (92), Expect = 0.52, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 23/46 (50%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
VC C + + + H+R HTGE+PY C QC F + L H
Sbjct: 53 VCEECGFKAAYKSHLSRHLRKHTGERPYKCDQCEFSATQKYNLDQH 98
Score = 39.7 bits (91), Expect = 0.73, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C Y + + H+ HTG+K Y CG+C +R+ + L H++K
Sbjct: 370 YKCEECGYRTAVSCNLSRHMARHTGQKAYMCGECGYRTVNSDHLKVHMRK 419
Score = 36.6 bits (83), Expect = 5.1, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
+ C C + + + HIRTHTG+KP+ C QC + +
Sbjct: 604 YKCEECGLRTADESYLSKHIRTHTGKKPFKCDQCDYSA 641
Score = 36.6 bits (83), Expect = 6.2, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHT--GEKPYACGQCAFRSASVAGLHYHLK 196
R D + + C C Y + +I + H+ H+ G+ PY C +C R+A + L H++
Sbjct: 566 RIDAGKKPYKCDQCGYCATHIWQLERHMAKHSDAGDTPYKCEECGLRTADESYLSKHIR 624
Score = 36.2 bits (82), Expect = 7.9, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IRT + F C CDY + H EKP+ CG+C F++ L+ H++
Sbjct: 623 IRTHTGKKPFKCDQCDYSATQ---KEDLALKHNREKPFMCGECGFKAVGKPELYKHMR 677
>gi|260781009|ref|XP_002585621.1| hypothetical protein BRAFLDRAFT_63005 [Branchiostoma floridae]
gi|229270639|gb|EEN41632.1| hypothetical protein BRAFLDRAFT_63005 [Branchiostoma floridae]
Length = 392
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + HI HTGEKPY CG+C +R+A + L H++
Sbjct: 131 MRTHTGEKPYKCDQCDYSAARKSTLEDHITKHTGEKPYMCGECGYRTAKKSHLSKHMR 188
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A + L +HL K
Sbjct: 253 YMCGECGYRTTQKSTLSKHMRTHTGEKPYKCDQCDYSAADKSSLDFHLTK 302
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY CG+C +R+A + L H+K
Sbjct: 19 MRTHTGEKPYKCDQCDYSAAQKANLDLHLTKHTGEKPYMCGECGYRAACKSNLSRHMK 76
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RT + + C CDY + + H+ HTG+KPY CG+C +R+A L H++
Sbjct: 328 TRTHTGKKPYKCDQCDYSAAQKSTLDKHVAKHTGDKPYMCGECGYRTARKDRLSQHMR 385
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY CG+C +R+ + L H++
Sbjct: 216 MRTHTGEKPYKCDQCDYAAARKSHLDQHLTKHTGEKPYMCGECGYRTTQKSTLSKHMR 273
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C Y + + H+RTHTGEKPY C QC + +A A L HL K
Sbjct: 1 MCGECGYRTNLKSTLSKHMRTHTGEKPYKCDQCDYSAAQKANLDLHLTK 49
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRS-HIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C CDY + + S H+RTHTGEKPY C QC + +A + L HL K
Sbjct: 187 MRTHTGEKPYKCDQCDYSATSYKSHLSVHMRTHTGEKPYKCDQCDYAAARKSHLDQHLTK 246
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 43/103 (41%), Gaps = 21/103 (20%)
Query: 95 CKTCSYMIRPNAN--------NTFSPF-CIYC--KAVLSTNLNELIEHCRTCKSMIRTDP 143
C C Y AN P+ C C +A +NL+ + K+ P
Sbjct: 30 CDQCDYSAAQKANLDLHLTKHTGEKPYMCGECGYRAACKSNLSRHM------KTHTGEKP 83
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
F+ C C+Y + + H+ HTGEKPY CG+C R+A
Sbjct: 84 FK----CDQCNYSAAQKSSLDKHLLKHTGEKPYMCGECGLRTA 122
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSAS 187
++C C Y + + H+RTHTGEKPY C QC + + S
Sbjct: 168 YMCGECGYRTAKKSHLSKHMRTHTGEKPYKCDQCDYSATS 207
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H++THTGEKP+ C QC + +A + L HL
Sbjct: 56 YMCGECGYRAACKSNLSRHMKTHTGEKPFKCDQCNYSAAQKSSLDKHL 103
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C Y + + + H RTHTG+KPY C QC + +A + L H+ K
Sbjct: 309 YNCGECGYRTRHKSDLLKHTRTHTGKKPYKCDQCDYSAAQKSTLDKHVAK 358
Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 165 SHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+H+RTHTGEKPY C QC + +A + L H+ K
Sbjct: 129 NHMRTHTGEKPYKCDQCDYSAARKSTLEDHITK 161
>gi|606948|gb|AAC50115.1| neuron-restrictive silencer factor, partial [Homo sapiens]
gi|1094872|prf||2106430A neuron-restrictive silencer factor
Length = 681
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C C Y N + + + K NE + C C + +R
Sbjct: 300 CDRCGY-----NTNRYDHYTAHLKHHTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 354
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 355 RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 406
Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEH 131
KH H++ + + C C+Y R + N F C S N ++H
Sbjct: 318 KH-HTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFPRKVYTCGKCNYFSDRKNNYVQH 376
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 377 -------VRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 429
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 430 TRHARQVHN 438
Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 390 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR--- 434
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 435 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 491
Query: 197 KTY 199
+
Sbjct: 492 SKH 494
>gi|260810242|ref|XP_002599912.1| hypothetical protein BRAFLDRAFT_74035 [Branchiostoma floridae]
gi|229285196|gb|EEN55924.1| hypothetical protein BRAFLDRAFT_74035 [Branchiostoma floridae]
Length = 456
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 6/60 (10%)
Query: 145 RHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
RHK F+C CDY +Y+ + H+R HTGEKP+ C +C++ +A L HL+ YH
Sbjct: 369 RHKGEKPFMCGECDYRAYHNCRLVEHMRKHTGEKPFKCKECSYSTAYKGDLVKHLR--YH 426
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
F C C Y + G + H+R HT E+PY+C +C +++ + L H++ +
Sbjct: 404 FKCKECSYSTAYKGDLVKHLRYHTSERPYSCQECDYKTKDRSNLAKHIRNKHQ 456
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 151 YACDYFSYNIGCMR---SHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
Y CD + +N R H + H GEKP+ CG+C +R+ L H++K
Sbjct: 348 YVCDVYGFNTTPPRYIYEHKKRHKGEKPFMCGECDYRAYHNCRLVEHMRK 397
>gi|260823050|ref|XP_002603996.1| hypothetical protein BRAFLDRAFT_71715 [Branchiostoma floridae]
gi|229289321|gb|EEN60007.1| hypothetical protein BRAFLDRAFT_71715 [Branchiostoma floridae]
Length = 207
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CDY + + ++ H HTGEKPY CG+C +RSA + L H++
Sbjct: 38 FKCDQCDYSAVDKSKLKQHQVKHTGEKPYMCGECGYRSAKKSDLSKHMR 86
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H HTGEKPY CG+C FR+A + L H++
Sbjct: 141 MRTHTGEKPYKCDQCDYSAAEKHHLIDHQTRHTGEKPYMCGECGFRTAHRSTLLIHMR 198
Score = 43.1 bits (100), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y S + H+R+HTGEKPY C QC + + + L H
Sbjct: 66 YMCGECGYRSAKKSDLSKHMRSHTGEKPYKCEQCDYSATDKSKLKQH 112
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 127 ELIEHCRTCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
E ++ T KS ++ +H ++C C Y + + H+RTHTGEKPY C QC
Sbjct: 97 EQCDYSATDKSKLKQHQVKHTSEKPYMCGECGYGTAYRSHLSRHMRTHTGEKPYKCDQCD 156
Query: 183 FRSAS 187
+ +A
Sbjct: 157 YSAAE 161
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Query: 113 FCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTG 172
C C S ++L +H R S P++ C CDY + + ++ H HT
Sbjct: 67 MCGEC-GYRSAKKSDLSKHMR---SHTGEKPYK----CEQCDYSATDKSKLKQHQVKHTS 118
Query: 173 EKPYACGQCAFRSASVAGLHYHLK 196
EKPY CG+C + +A + L H++
Sbjct: 119 EKPYMCGECGYGTAYRSHLSRHMR 142
Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+RT + C CDY + + H +TH+GEKP+ C QC + + + L H
Sbjct: 1 MRTHTGEKPYKCDQCDYAAAVKHNLIDHQKTHSGEKPFKCDQCDYSAVDKSKLKQH 56
>gi|187954533|gb|AAI40817.1| Human immunodeficiency virus type I enhancer binding protein 1
[Homo sapiens]
Length = 2718
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 106 ANNTFSP-FCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH--KFVCYACDYFSYNIGC 162
AN+T SP IY +++ +N+ +E + C +++ + K++C C+
Sbjct: 363 ANSTQSPPMPIYNSTHVASVVNQSVE--QMCNLLLKDQKPKKQGKYICEYCNRACAKPSV 420
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ HIR+HTGE+PY C C F + + L+ H K H
Sbjct: 421 LLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAH 458
Score = 44.3 bits (103), Expect = 0.030, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 2085 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 2140
>gi|119575715|gb|EAW55311.1| human immunodeficiency virus type I enhancer binding protein 1,
isoform CRA_c [Homo sapiens]
gi|261858090|dbj|BAI45567.1| human immunodeficiency virus type I enhancer binding protein 1
[synthetic construct]
Length = 2718
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 106 ANNTFSP-FCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH--KFVCYACDYFSYNIGC 162
AN+T SP IY +++ +N+ +E + C +++ + K++C C+
Sbjct: 363 ANSTQSPPMPIYNSTHVASVVNQSVE--QMCNLLLKDQKPKKQGKYICEYCNRACAKPSV 420
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ HIR+HTGE+PY C C F + + L+ H K H
Sbjct: 421 LLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAH 458
Score = 44.3 bits (103), Expect = 0.030, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 2085 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 2140
>gi|119575716|gb|EAW55312.1| human immunodeficiency virus type I enhancer binding protein 1,
isoform CRA_d [Homo sapiens]
Length = 2072
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 106 ANNTFSP-FCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH--KFVCYACDYFSYNIGC 162
AN+T SP IY +++ +N+ +E + C +++ + K++C C+
Sbjct: 363 ANSTQSPPMPIYNSTHVASVVNQSVE--QMCNLLLKDQKPKKQGKYICEYCNRACAKPSV 420
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ HIR+HTGE+PY C C F + + L+ H K H
Sbjct: 421 LLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAH 458
>gi|119575714|gb|EAW55310.1| human immunodeficiency virus type I enhancer binding protein 1,
isoform CRA_b [Homo sapiens]
Length = 2719
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 106 ANNTFSP-FCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH--KFVCYACDYFSYNIGC 162
AN+T SP IY +++ +N+ +E + C +++ + K++C C+
Sbjct: 363 ANSTQSPPMPIYNSTHVASVVNQSVE--QMCNLLLKDQKPKKQGKYICEYCNRACAKPSV 420
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ HIR+HTGE+PY C C F + + L+ H K H
Sbjct: 421 LLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAH 458
Score = 44.3 bits (103), Expect = 0.030, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 2086 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 2141
>gi|116805342|ref|NP_002105.2| zinc finger protein 40 [Homo sapiens]
gi|254763385|sp|P15822.3|ZEP1_HUMAN RecName: Full=Zinc finger protein 40; AltName: Full=Cirhin
interaction protein; Short=CIRIP; AltName: Full=Gate
keeper of apoptosis-activating protein; Short=GAAP;
AltName: Full=Human immunodeficiency virus type I
enhancer-binding protein 1; Short=HIV-EP1; AltName:
Full=Major histocompatibility complex-binding protein 1;
Short=MBP-1; AltName: Full=Positive regulatory domain
II-binding factor 1; Short=PRDII-BF1
Length = 2718
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 106 ANNTFSP-FCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH--KFVCYACDYFSYNIGC 162
AN+T SP IY +++ +N+ +E + C +++ + K++C C+
Sbjct: 363 ANSTQSPPMPIYNSTHVASVVNQSVE--QMCNLLLKDQKPKKQGKYICEYCNRACAKPSV 420
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ HIR+HTGE+PY C C F + + L+ H K H
Sbjct: 421 LLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAH 458
Score = 44.3 bits (103), Expect = 0.030, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 2085 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 2140
>gi|410293252|gb|JAA25226.1| human immunodeficiency virus type I enhancer binding protein 1 [Pan
troglodytes]
Length = 2718
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 106 ANNTFSP-FCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH--KFVCYACDYFSYNIGC 162
AN+T SP IY +++ +N+ +E + C +++ + K++C C+
Sbjct: 363 ANSTQSPPMPIYNSTHVASVVNQSVE--QMCNLLLKDQKPKKQGKYICEYCNRACAKPSV 420
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ HIR+HTGE+PY C C F + + L+ H K H
Sbjct: 421 LLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAH 458
Score = 44.3 bits (103), Expect = 0.031, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 2085 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 2140
>gi|297489509|ref|XP_002697660.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 40 [Bos taurus]
gi|296473957|tpg|DAA16072.1| TPA: human immunodeficiency virus type I enhancer binding protein 1
[Bos taurus]
Length = 2679
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 99 SYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH--KFVCYACDYF 156
S + P + P IY + ++ +N +E + C +++ + K++C C+
Sbjct: 352 SVPVSPTPSTQSPPTPIYNSSPVAAVVNHSVE--QMCSLLLKDQKPKKQGKYICEYCNRA 409
Query: 157 SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ HIR+HTGE+PY C C F + + L+ H K H
Sbjct: 410 CAKPSVLLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAH 453
Score = 45.1 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 2068 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKTH 2123
>gi|358418574|ref|XP_003583980.1| PREDICTED: zinc finger protein 40 [Bos taurus]
Length = 2672
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 99 SYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH--KFVCYACDYF 156
S + P + P IY + ++ +N +E + C +++ + K++C C+
Sbjct: 345 SVPVSPTPSTQSPPTPIYNSSPVAAVVNHSVE--QMCSLLLKDQKPKKQGKYICEYCNRA 402
Query: 157 SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ HIR+HTGE+PY C C F + + L+ H K H
Sbjct: 403 CAKPSVLLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAH 446
Score = 45.1 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 2061 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKTH 2116
>gi|260811183|ref|XP_002600302.1| hypothetical protein BRAFLDRAFT_118281 [Branchiostoma floridae]
gi|229285588|gb|EEN56314.1| hypothetical protein BRAFLDRAFT_118281 [Branchiostoma floridae]
Length = 1312
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C C+Y + G + H THTGEKPY C +C FR+A A L H +K
Sbjct: 696 MRTHTGEKPYKCDQCNYCAAQKGKLDRHKLTHTGEKPYMCEECGFRTAHRATLTIHKRK 754
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + G + H+R HTGEKP+ C QC + +A L H++K
Sbjct: 10 YKCDQCDYSAAQKGHLDHHMRKHTGEKPFKCDQCDYSAAQKCNLDQHMRK 59
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 24/137 (17%)
Query: 78 LCKHCHSQLSHLDLL-DHCKTCS------YMIRPNANNTFSPFCIYCKAVLSTNLNELIE 130
+CK C + S+ L H +T + Y + N+ +TF+ E
Sbjct: 1089 MCKDCGFRASYRSTLTKHMRTHTGKKPFKYDLSDNSKDTFA-------GHTQKQAGEKPY 1141
Query: 131 HCRTC--KSMIRTDPFRHK--------FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ 180
C C ++ +R+D RHK + C CD+ + + +H+ HTG+KPY CG+
Sbjct: 1142 MCGECGYRTAVRSDLARHKVKHTDEKPYSCDQCDFSTKWKLSLHNHMVMHTGDKPYMCGE 1201
Query: 181 CAFRSASVAGLHYHLKK 197
C +R+A + L H+ +
Sbjct: 1202 CGYRTAYRSTLTKHMAR 1218
Score = 50.1 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 136 KSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
KS + RH +C+ C Y + N + H+RTHTGEKPY C QC + +A L
Sbjct: 661 KSYLDQHKLRHTGEKPHLCWECGYRTSNRSGLNKHMRTHTGEKPYKCDQCNYCAAQKGKL 720
Query: 192 HYH 194
H
Sbjct: 721 DRH 723
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 24/136 (17%)
Query: 78 LCKHCHSQLSHLDLL-DHCKTCS------YMIRPNANNTFSPFCIYCKAVLSTNLNELIE 130
+CK C + S+ L H +T + Y + N+ +TF+ E
Sbjct: 980 MCKDCGFRASYRSTLTKHMRTHTGKKPFKYDLSDNSKDTFA-------GHTQKQAGEKPY 1032
Query: 131 HCRTC--KSMIRTDPFRHK--------FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ 180
C C ++ +R+D RHK + C CD+ + + +H+ HTGEKPY C
Sbjct: 1033 MCGECGYRTAVRSDLARHKVKHTDEKPYSCDQCDFSTKWELSLNNHMVVHTGEKPYMCKD 1092
Query: 181 CAFRSASVAGLHYHLK 196
C FR++ + L H++
Sbjct: 1093 CGFRASYRSTLTKHMR 1108
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RHK C CDY + + H+ H G+KPY CG+C +R+A L H++
Sbjct: 1256 RHK--CDQCDYSTARKSDLERHMANHAGKKPYMCGKCGYRAAQKTQLSRHMR 1305
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
F C CDY + + H+R HTGEKPY C C + +A L +H+ + +
Sbjct: 38 FKCDQCDYSAAQKCNLDQHMRKHTGEKPYKCDLCDYSAAKKGSLDHHIMRKH 89
Score = 45.1 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 148 FVCYACDYFSYNIGCMRSHI-RTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + G + HI R HTGE+PY C QC + + + + +H+ K
Sbjct: 66 YKCDLCDYSAAKKGSLDHHIMRKHTGERPYKCEQCDYSTVRKSDVDHHMAK 116
Score = 43.5 bits (101), Expect = 0.046, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + H+ H G KPY CG+C +R+ + + L H K
Sbjct: 895 YKCDQCDYSTARKSNLNKHMARHAGNKPYVCGECGYRTDTRSHLAQHESK 944
Score = 43.1 bits (100), Expect = 0.068, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C+Y + + H HTGEKP+ C +C +R+++ +GL+ H++
Sbjct: 649 YKCDQCNYTAPRKSYLDQHKLRHTGEKPHLCWECGYRTSNRSGLNKHMR 697
Score = 42.4 bits (98), Expect = 0.094, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CD+ + + +H+ HTGEKPY C C FR++ + L H++
Sbjct: 951 YSCDQCDFSTKWELSLNNHMVVHTGEKPYMCKDCGFRASYRSTLTKHMR 999
Score = 42.4 bits (98), Expect = 0.100, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 142 DPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
D + VC C Y + + H+R HTGEKPY C QC + +A + L+ H+ +
Sbjct: 862 DSVKTPSVCGECGYRAAR-SHLVIHMRKHTGEKPYKCDQCDYSTARKSNLNKHMAR 916
Score = 40.4 bits (93), Expect = 0.36, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 167 IRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+R HTGEKPY C QC + +A L +H++K
Sbjct: 1 MRKHTGEKPYKCDQCDYSAAQKGHLDHHMRK 31
Score = 40.4 bits (93), Expect = 0.37, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C + + + + H R H+GEKPY C QC + + + L+ H+
Sbjct: 733 YMCEECGFRTAHRATLTIHKRKHSGEKPYKCDQCDYSTRAKNNLNKHM 780
Score = 40.4 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
++R + C CDY + + H+ HTGEKPY CG+C
Sbjct: 85 IMRKHTGERPYKCEQCDYSTVRKSDVDHHMAKHTGEKPYMCGECG 129
Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+VC C Y + + H HT EKPY+C QC F + L+ H+
Sbjct: 923 YVCGECGYRTDTRSHLAQHESKHTDEKPYSCDQCDFSTKWELSLNNHM 970
>gi|260832584|ref|XP_002611237.1| hypothetical protein BRAFLDRAFT_71198 [Branchiostoma floridae]
gi|229296608|gb|EEN67247.1| hypothetical protein BRAFLDRAFT_71198 [Branchiostoma floridae]
Length = 441
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+F C C Y + + +R H RTHTGEKPY C QC + +A L H+
Sbjct: 65 RFACTVCGYMAASKAYLRKHTRTHTGEKPYKCDQCDYAAARKGSLDKHM 113
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 111 SPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRT 169
PF C C+ +TN L +H R S R + C CDY + G + H+
Sbjct: 176 KPFLCGQCE-YRTTNRYYLSDHMRIHSSEKR-------YKCDQCDYSAAQKGTLDRHMLR 227
Query: 170 HTGEKPYACGQCAFRSASVAGLHYHLKK 197
HTGEKPY CG+C F++ L H+++
Sbjct: 228 HTGEKPYICGECGFKTPDRFSLTRHMRR 255
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C+Y + + + +H+RTHTG KPY C QC + +A L H+ K
Sbjct: 318 FMCGECEYRTAHKSSLTAHMRTHTGVKPYKCDQCDYSAAKKFALDRHMAK 367
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + H+ HTGEKP+ CG+C +++ ++ L H+KK
Sbjct: 262 YKCDQCDYSAAQKFALDRHMAKHTGEKPFICGKCGYKTNVISSLTIHMKK 311
Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ RT + C CDY + G + H+ HTG PY CGQC +++ L H+
Sbjct: 82 RKHTRTHTGEKPYKCDQCDYAAARKGSLDKHMANHTGNWPYMCGQCGYKTTERCRLTQHI 141
Query: 196 K 196
+
Sbjct: 142 R 142
Score = 42.7 bits (99), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + HIR HTGEKPY C QC F A+ L HL
Sbjct: 122 YMCGQCGYKTTERCRLTQHIRLHTGEKPYKCDQCDFSYANKDSLDRHL 169
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CD+ N + H+ TH+GEKP+ CGQC +R+ + L H++
Sbjct: 150 YKCDQCDFSYANKDSLDRHLLTHSGEKPFLCGQCEYRTTNRYYLSDHMR 198
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C CDY + + H+ HTGEKP+ CG C +R+A L H+
Sbjct: 346 YKCDQCDYSAAKKFALDRHMAKHTGEKPFFCGVCGYRTADKIDLSQHV 393
Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C Y + + + H+ HTGEKPY C QC F + L+ HL K
Sbjct: 374 FFCGVCGYRTADKIDLSQHVIKHTGEKPYKCDQCDFSTTKKKYLNKHLAK 423
Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + + H+R H+G KPY C QC + +A L H+ K
Sbjct: 234 YICGECGFKTPDRFSLTRHMRRHSGVKPYKCDQCDYSAAQKFALDRHMAK 283
>gi|38018|emb|CAA35798.1| unnamed protein product [Homo sapiens]
Length = 2717
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 102 IRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH--KFVCYACDYFSYN 159
I P + P IY +++ +N+ +E + C +++ + K++C C+
Sbjct: 360 ISPANSTQSPPMPIYNSTHVASVVNQSVE--QMCNLLLKDQKPKKQGKYICEYCNRACAK 417
Query: 160 IGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ HIR+HTGE+PY C C F + + L+ H K H
Sbjct: 418 PSVLLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAH 458
Score = 44.3 bits (103), Expect = 0.030, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 2084 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 2139
>gi|260823016|ref|XP_002603979.1| hypothetical protein BRAFLDRAFT_71733 [Branchiostoma floridae]
gi|229289304|gb|EEN59990.1| hypothetical protein BRAFLDRAFT_71733 [Branchiostoma floridae]
Length = 581
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IRT + C CDY + + H++ H+GEKPY CG+C +R+A + L H++
Sbjct: 103 IRTHTGEKPYKCDQCDYSAARKSSLDKHLQIHSGEKPYMCGECGYRTAQKSDLSRHMR 160
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 73/181 (40%), Gaps = 19/181 (10%)
Query: 16 ILEPTLERNRTNITSDVYIAVLVFSNLTFFITAQLVLMSLDQILNLNLSVLLVTTIPTQN 75
+L+ + E+ ++ S + + + ++ + L + + NLSV + + +
Sbjct: 412 VLKHSAEKPYISVKSTLVKHIRKHTGEKPYMCGECGLRT---AIKCNLSVHMRSHTGEKP 468
Query: 76 HSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC 135
+ C C +H LD ++ + F C C + L H
Sbjct: 469 YK-CDQCDYSAAHRSTLD-----QHLEKHTGQKPF--MCGEC-GYRAAQWQHLYRH---- 515
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + C CDY + + H+ HTGEKPY CG+C FR+A + L H+
Sbjct: 516 ---MRTHTGEKPYKCDQCDYSAAQKLTLDKHLVKHTGEKPYMCGECGFRTAQRSNLSRHM 572
Query: 196 K 196
+
Sbjct: 573 R 573
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + HIRTHTGEKPY C QC + +A + L HL+
Sbjct: 84 YMCGECGYRTEKKSNLSQHIRTHTGEKPYKCDQCDYSAARKSSLDKHLQ 132
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY CG+C +R + L H++
Sbjct: 215 MRTHTGEKPYKCDQCDYSAAVQSTLDKHLAKHTGEKPYMCGECGYRVTQKSDLSKHMR 272
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+R H+GEKPY CG+C +R+ L H++
Sbjct: 159 MRTHTGEKLYKCDQCDYSAAQKPNLDRHLRKHSGEKPYMCGECGYRTNYKVSLSGHMR 216
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 36/82 (43%), Gaps = 11/82 (13%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C Y AV ST L +H P+ +C C Y + H+R HTG+
Sbjct: 229 CDYSAAVQSTLDKHLAKH-------TGEKPY----MCGECGYRVTQKSDLSKHMRIHTGD 277
Query: 174 KPYACGQCAFRSASVAGLHYHL 195
KPY CGQC + +A L HL
Sbjct: 278 KPYKCGQCDYSAAQKGHLDQHL 299
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + H+RTHTGEKPY C QC + +A L HL K
Sbjct: 497 FMCGECGYRAAQWQHLYRHMRTHTGEKPYKCDQCDYSAAQKLTLDKHLVK 546
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A + L HL K
Sbjct: 196 YMCGECGYRTNYKVSLSGHMRTHTGEKPYKCDQCDYSAAVQSTLDKHLAK 245
Score = 43.5 bits (101), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEK Y C QC + +A L HL+K
Sbjct: 140 YMCGECGYRTAQKSDLSRHMRTHTGEKLYKCDQCDYSAAQKPNLDRHLRK 189
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + G + H HT ++PY CG+C +R+ + L H++
Sbjct: 328 MRTHTGEKPYKCDQCDYSAAQKGLLDQHRMKHTDKRPYMCGECGYRATQKSDLVKHMR 385
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+I+ + ++C C Y + + H+RTHTGEKPY C QC + SA+ GL
Sbjct: 299 LIKHNGGEKPYMCGECGYRTAWKSHLFQHMRTHTGEKPYKCDQCDY-SAAQKGL 351
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
M TD + ++C C Y + + H+R HTGEKPY C QC + +A + + H+
Sbjct: 357 MKHTD--KRPYMCGECGYRATQKSDLVKHMRIHTGEKPYKCDQCDYSAAQKSHMQQHV 412
Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
H+R+HTGEKPY C QC + +A + L HL+K
Sbjct: 459 HMRSHTGEKPYKCDQCDYSAAHRSTLDQHLEK 490
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G M H+ HTG+KPY CG+C +R+ + L H++
Sbjct: 69 GSMGRHVVKHTGDKPYMCGECGYRTEKKSNLSQHIR 104
>gi|260832101|ref|XP_002610996.1| hypothetical protein BRAFLDRAFT_61067 [Branchiostoma floridae]
gi|229296366|gb|EEN67006.1| hypothetical protein BRAFLDRAFT_61067 [Branchiostoma floridae]
Length = 776
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 117 CKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY 176
C+ ++ + L +H +RT + C CDY + + H+ HTGEKPY
Sbjct: 521 CEGCGTSRKDHLFQH-------MRTHAGEKPYKCDQCDYSAARKSTLNDHLLKHTGEKPY 573
Query: 177 ACGQCAFRSASVAGLHYHLK 196
CG+C +R+A L+ H+K
Sbjct: 574 MCGECGYRTAVRCNLYRHMK 593
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + H+RTHTGEKPY C QC + +A + L HL K
Sbjct: 407 FMCGECGYRTAQKSDLSRHMRTHTGEKPYKCDQCDYSAARKSSLDRHLAK 456
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT R + C CDY + + + H+ HTG+KP+ CG+C +R+A + L H++
Sbjct: 370 MRTHTGRKPYKCDQCDYSAAHKLSLDQHLARHTGDKPFMCGECGYRTAQKSDLSRHMR 427
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + H+RTHTGE+PY C QC + +A L+ HL K
Sbjct: 56 FMCGECGYGTTTKAGLAKHMRTHTGERPYKCDQCDYSAAQKYTLNRHLAK 105
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + +H+RTHTGE+PY C QC + +A + L HL K
Sbjct: 295 FMCGECGYRTAQKSDLSTHMRTHTGERPYNCDQCDYSAAVKSTLDRHLAK 344
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 17/100 (17%)
Query: 114 CIYCKAVLSTNLNELIEH-------CRTC--KSMIRTDPFRH--------KFVCYACDYF 156
C Y A ST + L++H C C ++ +R + +RH + C CDY
Sbjct: 550 CDYSAARKSTLNDHLLKHTGEKPYMCGECGYRTAVRCNLYRHMKIHTGEKPYKCDQCDYS 609
Query: 157 SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ + H+ HTG+KP+ CG+C +R+ + L H++
Sbjct: 610 AGLKQLLDRHLAKHTGDKPFMCGECGYRTTQKSALSIHMR 649
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KPY CG+C +R+A + L H++
Sbjct: 314 MRTHTGERPYNCDQCDYSAAVKSTLDRHLAKHTGDKPYMCGECGYRAALKSHLSVHMR 371
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C Y + + H+RTHTG+KPY C QC F +A + L HL +
Sbjct: 464 MCGECGYRTAQKSDLSKHMRTHTGDKPYKCDQCDFSAAQKSNLDRHLAR 512
Score = 45.1 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KP+ CG+C +R+A L H++
Sbjct: 75 MRTHTGERPYKCDQCDYSAAQKYTLNRHLAKHTGDKPFMCGECGYRTAQKCDLCKHMR 132
Score = 44.7 bits (104), Expect = 0.024, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KP CG+C +R+A + L H++
Sbjct: 426 MRTHTGEKPYKCDQCDYSAARKSSLDRHLAKHTGDKPCMCGECGYRTAQKSDLSKHMR 483
Score = 44.3 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C Y + + H+RTHTGEKPY C +C + +A + L HL K
Sbjct: 1 MCGECGYRAPQKSDLSKHMRTHTGEKPYKCDKCDYSAAQKSNLDIHLAK 49
Score = 42.7 bits (99), Expect = 0.087, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + H+R HTG KPY C QC + +A + L H+ K
Sbjct: 629 FMCGECGYRTTQKSALSIHMRAHTGIKPYKCDQCDYSAARKSHLDIHIAK 678
Score = 42.4 bits (98), Expect = 0.097, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
VC CDY + + H+ TG KP+ CG+C +R+A + L H++
Sbjct: 267 LVCDQCDYSAAQKCTLDRHLANQTGAKPFMCGECGYRTAQKSDLSTHMR 315
Score = 41.6 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + HI H+ +KP+ CG+C FR+ + L H+K
Sbjct: 657 YKCDQCDYSAARKSHLDIHIAKHSNDKPFMCGECGFRTNDRSSLSRHMK 705
Score = 40.4 bits (93), Expect = 0.44, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CDY + + H+ HTG+KPY CG C + + L H++
Sbjct: 713 FKCDQCDYSAARKHHLDRHLAKHTGDKPYMCGDCGYSATQWCHLSKHMR 761
Score = 39.7 bits (91), Expect = 0.64, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 153 CDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
CD + HI HTGEKPY CG C +R+A L+ H++
Sbjct: 125 CDLCKHMRSHTEIHIAKHTGEKPYMCGACEYRTADRRHLNRHMR 168
Score = 39.3 bits (90), Expect = 0.83, Method: Composition-based stats.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
H+RTH GEKPY C QC + +A + L+ HL K
Sbjct: 535 HMRTHAGEKPYKCDQCDYSAARKSTLNDHLLK 566
Score = 38.9 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 11/78 (14%)
Query: 130 EHCRTCKSM-------IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHT----GEKPYAC 178
+ C CK M I ++C AC+Y + + + H+RTHT GEKPY
Sbjct: 123 QKCDLCKHMRSHTEIHIAKHTGEKPYMCGACEYRTADRRHLNRHMRTHTAKHSGEKPYMW 182
Query: 179 GQCAFRSASVAGLHYHLK 196
G+C + + + L H+K
Sbjct: 183 GECGYSTTARRYLTRHMK 200
Score = 36.2 bits (82), Expect = 6.9, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C + + + + H++ HT EK + C QC + +A L HL K
Sbjct: 685 FMCGECGFRTNDRSSLSRHMKIHTSEKTFKCDQCDYSAARKHHLDRHLAK 734
Score = 35.8 bits (81), Expect = 9.2, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
++C C Y + + H+RTHTGE P+ C QC +
Sbjct: 741 YMCGDCGYSATQWCHLSKHMRTHTGENPHKCDQCDY 776
>gi|260795655|ref|XP_002592820.1| hypothetical protein BRAFLDRAFT_194454 [Branchiostoma floridae]
gi|229278044|gb|EEN48831.1| hypothetical protein BRAFLDRAFT_194454 [Branchiostoma floridae]
Length = 416
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C Q S LD L +M + C C ST+ N K+
Sbjct: 255 CEECSKQFSQLDSLK-----RHMQTHTGEKPYG--CEECSRQFSTSGN--------LKTH 299
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C IG +++H+RTHTGEKPY C +C+ + + + L H++
Sbjct: 300 MRTHTGEKPYKCEECSKQFSEIGALKTHMRTHTGEKPYKCEECSRQFSVLDSLKKHMR 357
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 17/119 (14%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKS 137
C+ C Q SHL L I + P+ C C S L L KS
Sbjct: 115 CEECSRQFSHLGNLK--------IHMRTHTGKKPYRCEECSKQFS-QLGHL-------KS 158
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C +G +++HIRTHTGEKPY C +C+ + + + L H++
Sbjct: 159 HMRTHTGEKPYSCEECSKQFSQLGDLKTHIRTHTGEKPYRCEECSKQFSQLGDLKKHIR 217
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
KS +RT + C C +G +RSH+RTHTGE+PY C +C+ + + + L H+
Sbjct: 73 KSHMRTHTREKPYKCEECSRQFSELGTLRSHMRTHTGEEPYTCEECSRQFSHLGNLKIHM 132
Query: 196 K 196
+
Sbjct: 133 R 133
Score = 43.1 bits (100), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 19/120 (15%)
Query: 79 CKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
C+ C Q S L DL H IR + P+ C C + L L EH RT
Sbjct: 199 CEECSKQFSQLGDLKKH-------IRIHTGE--KPYKCEECSKQFN-QLRHLKEHMRT-- 246
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C C + ++ H++THTGEKPY C +C+ + ++ L H++
Sbjct: 247 -HTGEKPYR----CEECSKQFSQLDSLKRHMQTHTGEKPYGCEECSRQFSTSGNLKTHMR 301
>gi|260809003|ref|XP_002599296.1| hypothetical protein BRAFLDRAFT_64347 [Branchiostoma floridae]
gi|229284573|gb|EEN55308.1| hypothetical protein BRAFLDRAFT_64347 [Branchiostoma floridae]
Length = 394
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C Y S + +R H RTHTGEKPY C QC + +A + L +HL +
Sbjct: 68 YACGECGYRSRHRKALRQHQRTHTGEKPYKCDQCDYSAARKSTLDHHLAR 117
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 28/49 (57%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
VC C Y +Y + H+R HTGEKPY C QC + +A L YHL K
Sbjct: 181 VCSVCGYRAYQRSNLSIHMRIHTGEKPYKCNQCDYSAARKNELKYHLAK 229
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C+ C Y + + H++THTGEKP+ C QC + +A + L+ HL K
Sbjct: 292 YMCWVCGYRAARNSDLSKHMKTHTGEKPHRCDQCDYSAARKSQLNSHLAK 341
Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 30/66 (45%)
Query: 131 HCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAG 190
H + + RT + C CDY + + H+ HTGEKPY C +C + +
Sbjct: 79 HRKALRQHQRTHTGEKPYKCDQCDYSAARKSTLDHHLARHTGEKPYICRECGYAANQSGA 138
Query: 191 LHYHLK 196
L H++
Sbjct: 139 LTRHMR 144
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
FVC C Y ++ + +H+R HTGEK Y C QC + +A L H+
Sbjct: 236 FVCKECGYKTHKKYNLTNHMRYHTGEKRYKCDQCDYCAAHKHTLDEHM 283
Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
C CDY + + SH+ H+GEK Y C C +R+A + L H+K
Sbjct: 322 CDQCDYSAARKSQLNSHLAKHSGEKAYMCQFCGYRTAVRSHLSRHMK 368
>gi|260809347|ref|XP_002599467.1| hypothetical protein BRAFLDRAFT_281209 [Branchiostoma floridae]
gi|229284746|gb|EEN55479.1| hypothetical protein BRAFLDRAFT_281209 [Branchiostoma floridae]
Length = 412
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + N + HIRTHTG+KPY CG+C +R+A + L H++
Sbjct: 21 YLCGECGYRTTNRSHLTKHIRTHTGDKPYMCGECGYRAAQRSTLSIHMR 69
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F+C CDY + + H+ HTGEKPY CG+C +R+A+ + L+ H K
Sbjct: 68 MRTHTGEKPFMCEQCDYSAAQKSSLDLHVTKHTGEKPYMCGECGYRTANRSYLYQHKK 125
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C Y + C+ SH+RTHTGEKPY C QC + +A L +H+ K
Sbjct: 133 LICGECGYRTALKSCLSSHMRTHTGEKPYKCDQCDYSAAHKTTLDFHVAK 182
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
S +RT + C CDY + + + H+ HTGEKPY CG+C F++A + L H++
Sbjct: 150 SHMRTHTGEKPYKCDQCDYSAAHKTTLDFHVAKHTGEKPYMCGECGFKTALKSNLSQHMR 209
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 10/79 (12%)
Query: 118 KAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA 177
K L +NL++ +RT + C C+Y + + H+ HTGEKPY
Sbjct: 197 KTALKSNLSQ----------HMRTHTGEKPYKCDLCEYSAARKSSLYLHLSKHTGEKPYK 246
Query: 178 CGQCAFRSASVAGLHYHLK 196
CG+C +R+A + L H+K
Sbjct: 247 CGECEYRTAKKSNLSLHMK 265
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 119 AVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAC 178
+TN + L +H IRT ++C C Y + + H+RTHTGEKP+ C
Sbjct: 27 GYRTTNRSHLTKH-------IRTHTGDKPYMCGECGYRAAQRSTLSIHMRTHTGEKPFMC 79
Query: 179 GQCAFRSASVAGLHYHLKK 197
QC + +A + L H+ K
Sbjct: 80 EQCDYSAAQKSSLDLHVTK 98
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++T ++C C Y + + HIRTHTGEKPY C QC + +A + L HL
Sbjct: 264 MKTHTGEKPYMCEKCGYKTAIKSHLFQHIRTHTGEKPYKCDQCNYSAAKKSNLDRHL 320
Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C+ C Y + + H+RTHTGEKPY C C + +A L +H+ K
Sbjct: 329 YMCWECGYRTARKSRLSQHMRTHTGEKPYKCELCDYSAAQKTSLDHHVVK 378
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
+RT + C CDY + + H+ H+GEKPY CG+C +R+A
Sbjct: 348 MRTHTGEKPYKCELCDYSAAQKTSLDHHVVKHSGEKPYICGECGYRTA 395
Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H+RTHTGEKPY C C + +A + L+ HL K
Sbjct: 189 YMCGECGFKTALKSNLSQHMRTHTGEKPYKCDLCEYSAARKSSLYLHLSK 238
Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C+Y + + H++THTGEKPY C +C +++A + L H++
Sbjct: 245 YKCGECEYRTAKKSNLSLHMKTHTGEKPYMCEKCGYKTAIKSHLFQHIR 293
>gi|260832620|ref|XP_002611255.1| hypothetical protein BRAFLDRAFT_138037 [Branchiostoma floridae]
gi|229296626|gb|EEN67265.1| hypothetical protein BRAFLDRAFT_138037 [Branchiostoma floridae]
Length = 438
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY S G + H+ H GEKPY CG+C FR+A + L H+K+
Sbjct: 74 YKCDQCDYSSAQKGNLDQHVVRHNGEKPYMCGECGFRTAFKSSLATHMKR 123
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + G ++ H+ HTG+KP CG+C +R+ +A L H++K
Sbjct: 18 YTCDQCDYAAAKKGNLKRHMAKHTGDKPLLCGECGYRTTDMAFLTIHMRK 67
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKPY CG+C FR+++ L H++
Sbjct: 270 YKCDQCDYSATEKSSLERHMTKHTGEKPYMCGECGFRTSARFSLTVHMR 318
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+R+ + C C+Y + G + SH+ HTGEKPY C +C +R+A L H+K
Sbjct: 317 MRSHTGEKPYKCDQCNYSAPKKGDLDSHLAKHTGEKPYMCDECGYRTAHKCNLTVHMK 374
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKPY CG+C +R+ + L H++
Sbjct: 130 YKCDQCDYSAAEKSTLGQHMTRHTGEKPYMCGECGYRTVTRYSLTVHMR 178
Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + + H+ HTGEKP CG+C FR+A + L H+K+
Sbjct: 214 FMCAECGYRTAHRSNLSRHMIKHTGEKPTNCGECGFRTAFKSSLATHMKR 263
Score = 43.5 bits (101), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C CDY + G + SH+ HT EKP+ C +C +R+A + L H+
Sbjct: 186 YKCDQCDYSAAKKGHLDSHMAKHTNEKPFMCAECGYRTAHRSNLSRHM 233
Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + ++ H HT EKPY C +C +R AS + L H++K
Sbjct: 382 YKCDQCDYSTGRKPDLKRHKAKHTVEKPYMCDECGYRMASRSSLTVHMRK 431
Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTG KPY C QC + +A L H+ K
Sbjct: 158 YMCGECGYRTVTRYSLTVHMRTHTGVKPYKCDQCDYSAAKKGHLDSHMAK 207
Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+C C Y + ++ + H+R HTG KPY C QC + SA L H+
Sbjct: 46 LLCGECGYRTTDMAFLTIHMRKHTGVKPYKCDQCDYSSAQKGNLDQHV 93
Score = 39.3 bits (90), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H+R+HTGEKPY C QC + + L HL K
Sbjct: 298 YMCGECGFRTSARFSLTVHMRSHTGEKPYKCDQCNYSAPKKGDLDSHLAK 347
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 19/32 (59%)
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
H R HTGEKPY C QC + +A L H+ K
Sbjct: 8 HKRKHTGEKPYTCDQCDYAAAKKGNLKRHMAK 39
Score = 36.2 bits (82), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H++THTG KPY C QC + + L H K
Sbjct: 354 YMCDECGYRTAHKCNLTVHMKTHTGAKPYKCDQCDYSTGRKPDLKRHKAK 403
>gi|148674679|gb|EDL06626.1| mCG124713 [Mus musculus]
Length = 558
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 45/89 (50%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC A LI+H RT K+ KF C CDY C+++H+R HTGE
Sbjct: 460 CRYCPAGFHERYA-LIQHQRTHKN-------EKKFKCKQCDYACKQERCLKAHMRMHTGE 511
Query: 174 KPYACGQCA--FRSASVAGLHYHLKKTYH 200
KP++C C FR + L HL+K YH
Sbjct: 512 KPFSCLACNKHFRQKQL--LTVHLRK-YH 537
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S M+ HIR+HTGE+P+ C QCA+ S
Sbjct: 324 TSGELVRHRRYKHTYEKPFKCSLCKYASVEASKMKRHIRSHTGERPFQCCQCAYASRDSY 383
Query: 190 GLHYHLK 196
L H++
Sbjct: 384 KLKRHMR 390
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 358 KRHIRSHTGERPFQCCQCAYASRDSYKLKRHMRTHSGEKPYECPTCHVRFTQSGTMKIHI 417
Query: 196 KKTY 199
+ +
Sbjct: 418 AQKH 421
>gi|297707424|ref|XP_002830506.1| PREDICTED: transcriptional repressor CTCFL isoform 4 [Pongo abelii]
Length = 613
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H +T K+ +F C C Y M +HIRTHTGE
Sbjct: 410 CRYCSAVFHERY-ALIQHQKTHKN-------EKRFKCKHCSYACKQERHMTAHIRTHTGE 461
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KP+ C C FR + H+ + YH
Sbjct: 462 KPFTCLSCNKCFRQKQLLNAHF---RKYH 487
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 324 TSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 383
Query: 190 GLHYHLK 196
L H++
Sbjct: 384 KLKRHMR 390
Score = 37.0 bits (84), Expect = 4.5, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 130 EHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSAS 187
E ++ K+ +T + F C C + S + H++TH EKP+ C C FR+ +
Sbjct: 239 EKAKSTKNQRKTKGAKRTFHCDVCMFTSSRMSSFNRHMKTHANEKPHLCHLCLKTFRTVT 298
Query: 188 VAGLH 192
+ H
Sbjct: 299 LLRNH 303
Score = 36.6 bits (83), Expect = 6.6, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 12/81 (14%)
Query: 131 HCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ 180
HC C ++T +C+ C + +R+H+ THTG +PY C
Sbjct: 258 HCDVCMFTSSRMSSFNRHMKTHANEKPHLCHLCLKTFRTVTLLRNHVNTHTGTRPYKCND 317
Query: 181 C--AFRSASVAGLHYHLKKTY 199
C AF ++ H K T+
Sbjct: 318 CNMAFVTSGELVRHRRYKHTH 338
>gi|260797683|ref|XP_002593831.1| hypothetical protein BRAFLDRAFT_75710 [Branchiostoma floridae]
gi|229279061|gb|EEN49842.1| hypothetical protein BRAFLDRAFT_75710 [Branchiostoma floridae]
Length = 310
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A+ + L+YH+ K
Sbjct: 181 YMCEKCGYRTARKSHLSQHVRTHTGEKPYKCDQCDYSAATKSALNYHVAK 230
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 43/102 (42%), Gaps = 21/102 (20%)
Query: 101 MIRPNANNTFSPF----CIY---CKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC 153
M RP + P+ C Y CK+ LS + RT F C C
Sbjct: 1 MERPRTHTGEKPYICDDCGYRAACKSALSRHR--------------RTHTGEKPFKCDQC 46
Query: 154 DYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
DY + + H+ HTGEKPY CG+C +R+ + L H+
Sbjct: 47 DYSAAQKSNLDKHLTKHTGEKPYMCGECGYRANRKSNLSQHM 88
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + + H++THTG+KPY CG+C +RSA + L H+
Sbjct: 97 YMCGECGYRTVSKSNLSRHMKTHTGDKPYICGECGYRSADKSTLSKHM 144
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y S + + H+ THTG+KPY CG+C +R+ + L H+
Sbjct: 125 YICGECGYRSADKSTLSKHMTTHTGDKPYMCGECGYRANRKSYLSQHM 172
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ H G+K Y CG+C +R+AS + L H+K
Sbjct: 200 VRTHTGEKPYKCDQCDYSAATKSALNYHVAKHAGDKSYMCGECGYRTASKSILSRHMK 257
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
RT ++C C Y + + H RTHTGEKP+ C QC + +A + L HL K
Sbjct: 5 RTHTGEKPYICDDCGYRAACKSALSRHRRTHTGEKPFKCDQCDYSAAQKSNLDKHLTK 62
Score = 42.4 bits (98), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+ THTGEKPY C +C +R+A + L H++
Sbjct: 153 YMCGECGYRANRKSYLSQHMTTHTGEKPYMCEKCGYRTARKSHLSQHVR 201
>gi|260787897|ref|XP_002588988.1| hypothetical protein BRAFLDRAFT_59991 [Branchiostoma floridae]
gi|229274160|gb|EEN44999.1| hypothetical protein BRAFLDRAFT_59991 [Branchiostoma floridae]
Length = 522
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 119 AVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAC 178
+T ++L+EH +RT + C CDY + + + H+ HTG KPY C
Sbjct: 90 GFRTTRKSDLVEH-------MRTHTGEKPYKCDQCDYSAAHKKSLNQHLAKHTGSKPYMC 142
Query: 179 GQCAFRSASVAGLHYHLK 196
G+C +R+A A L H+K
Sbjct: 143 GECGYRTAKKAHLVEHMK 160
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + SH+ HTG+KPY CG+C +R+A + L H++
Sbjct: 266 MRTHTGEKPYKCDQCDYSAAEKSHLDSHLAKHTGDKPYMCGECGYRTAQKSNLSTHMR 323
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C CDY + + H+ HTG+KPY CG+C +R+A L H++K
Sbjct: 378 MRTHTGEKPYKCDQCDYSATRKYHLDKHLAIHTGDKPYMCGECGYRTAQKCTLSQHMRK 436
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + +H+RTHTGEKPY C QC F + L HL K
Sbjct: 303 YMCGECGYRTAQKSNLSTHMRTHTGEKPYKCDQCDFSARRKNHLDQHLGK 352
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT ++C C Y + H+RTHTGEKPY C QC + +A L HL K
Sbjct: 19 MRTHTGEKPYMCEECGYRVAYKSYLSRHMRTHTGEKPYKCDQCDYSAAKKYNLDQHLAK 77
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KPY CG+C FR+ + L H++
Sbjct: 47 MRTHTGEKPYKCDQCDYSAAKKYNLDQHLAKHTGDKPYMCGECGFRTTRKSDLVEHMR 104
Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A + L HL K
Sbjct: 247 YMCGECGYRTVLKSTIARHMRTHTGEKPYKCDQCDYSAAEKSHLDSHLAK 296
Score = 43.5 bits (101), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H+RTHTGEKPY C QC + +A L+ HL K
Sbjct: 84 YMCGECGFRTTRKSDLVEHMRTHTGEKPYKCDQCDYSAAHKKSLNQHLAK 133
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CD+ + + H+ HTG+KPY CG+C +R+ + L H++
Sbjct: 322 MRTHTGEKPYKCDQCDFSARRKNHLDQHLGKHTGDKPYMCGECGYRTTWKSDLATHMR 379
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CD+ + + +H+ HTG+KPY CG+C +R+ L H++
Sbjct: 443 YKCDQCDFSAAQKSTLNNHVAMHTGDKPYMCGECGYRTVQKCNLSRHMR 491
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H++THTGEKPY C QC + +A + L HL
Sbjct: 140 YMCGECGYRTAKKAHLVEHMKTHTGEKPYKCDQCDYSAALKSNLKKHL 187
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+C C Y + + H+RTHTGEKPY C +C +R A + L H++
Sbjct: 1 MCGECGYRAARKSHLSQHMRTHTGEKPYMCEECGYRVAYKSYLSRHMR 48
Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 128 LIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSAS 187
L+EH ++T + C CDY + ++ H+ HTG+ PY CG+C +R+
Sbjct: 155 LVEH-------MKTHTGEKPYKCDQCDYSAALKSNLKKHLAMHTGDMPYMCGECGYRTTQ 207
Query: 188 VAGLHYHLK 196
L H++
Sbjct: 208 KCNLSLHMR 216
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+R HTG KPY C QC F +A + L+ H+
Sbjct: 415 YMCGECGYRTAQKCTLSQHMRKHTGVKPYKCDQCDFSAAQKSTLNNHV 462
>gi|260814530|ref|XP_002601968.1| hypothetical protein BRAFLDRAFT_94539 [Branchiostoma floridae]
gi|229287271|gb|EEN57980.1| hypothetical protein BRAFLDRAFT_94539 [Branchiostoma floridae]
Length = 1973
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 130 EHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
+H + ++ + F C C Y + + H+ HT EKPY CG+C FR+ +
Sbjct: 127 DHFYVLSTHMKIHTTQQSFKCGQCAYCTSRKSALIQHMAMHTDEKPYMCGECGFRTRLKS 186
Query: 190 GLHYHLKK 197
L H+KK
Sbjct: 187 ALSMHMKK 194
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
R P++ C CD+ + G + +HI H+GEKPY C +C +R+A L H++
Sbjct: 28 RGKPYK----CDQCDFCTARKGDLDTHIAEHSGEKPYLCEKCGYRTADKIQLSRHMRLHL 83
Query: 200 H 200
H
Sbjct: 84 H 84
Score = 39.7 bits (91), Expect = 0.76, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 136 KSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
KS + +H ++C C Y + + + +H++ HT ++ + CGQCA+ ++ + L
Sbjct: 101 KSSLDNHKLKHASEKPYMCGECGYRTDHFYVLSTHMKIHTTQQSFKCGQCAYCTSRKSAL 160
Query: 192 HYHL 195
H+
Sbjct: 161 IQHM 164
Score = 39.3 bits (90), Expect = 0.89, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RH+ C C + + + +H H EKPY CG+C +R+ L H+K
Sbjct: 88 RHR--CDQCAFSTLLKSSLDNHKLKHASEKPYMCGECGYRTDHFYVLSTHMK 137
>gi|300388142|ref|NP_001177951.1| transcriptional repressor CTCF isoform 2 [Homo sapiens]
gi|332846322|ref|XP_003315228.1| PREDICTED: transcriptional repressor CTCF [Pan troglodytes]
Length = 399
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ R F C CDY M H RTHTGE
Sbjct: 141 CRYCDAVFHERY-ALIQHQKSHKNEKR-------FKCDQCDYACRQERHMIMHKRTHTGE 192
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 193 KPYACSHCDKTFRQKQLLDMHF---KRYH 218
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 5 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 64
Query: 190 GLHYHLK 196
L H++
Sbjct: 65 KLKRHMR 71
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 39 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 98
>gi|260782551|ref|XP_002586349.1| hypothetical protein BRAFLDRAFT_108829 [Branchiostoma floridae]
gi|229271453|gb|EEN42360.1| hypothetical protein BRAFLDRAFT_108829 [Branchiostoma floridae]
Length = 980
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + HI HTG+KPY CG+C +R+A + L H+K
Sbjct: 909 MRTHTGEKPYKCDQCDYSAAQTSALNRHIAKHTGDKPYMCGECGYRTAEKSHLSEHMK 966
Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + G + +H+RTHTGEKPY C QC + +A + L HL K
Sbjct: 439 YMCGECGYRATQKGHLSNHMRTHTGEKPYKCDQCDYSAAQKSALDRHLAK 488
Score = 49.7 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A ++ L+ HL K
Sbjct: 383 YMCAECGYRTAKKRHLSEHMRTHTGEKPYKCDQCNYSAAQMSNLYRHLAK 432
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + H+RTHTGEKPY CGQC + +A + L HL +
Sbjct: 250 FMCGECGYRAAQRSDLSRHMRTHTGEKPYKCGQCDYSAARKSTLDRHLAR 299
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + +Y + + H+RTHTGEKPY C QC + +A + L HL K
Sbjct: 166 YMCGECGHRTYGMSDLSKHMRTHTGEKPYKCDQCNYSAAWKSSLDSHLAK 215
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + G + H+ HTGEKPY CG+C +R+ + L H+K
Sbjct: 514 MRTHTGEKPYKCDQCDYSAVAKGNLDYHLAKHTGEKPYMCGECGYRTTRKSHLSKHMK 571
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+RTHTGEKPY C QC + +A + L+ H+ K
Sbjct: 890 YMCGECGYRATHKSDLSKHMRTHTGEKPYKCDQCDYSAAQTSALNRHIAK 939
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C Y + + H+RTHTGEKPY C QC + + + L YHL K
Sbjct: 495 YKCDQCGYRTARKSHLSEHMRTHTGEKPYKCDQCDYSAVAKGNLDYHLAK 544
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A + L+ HL K
Sbjct: 722 YICGECGYRATYKCVLSKHMRTHTGEKPYKCDQCDYSAAHKSNLNRHLAK 771
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + + H+RTHTGEKPY C QC + +A + L HL
Sbjct: 834 YMCGECGYRATHKSALSKHMRTHTGEKPYKCDQCDYSAAKKSNLDQHL 881
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CDY + + H+ HTG+KPY CG+C R+ ++ L H++
Sbjct: 129 MRTHTGEKPFKCAQCDYSAARKFSLEQHLAKHTGDKPYMCGECGHRTYGMSDLSKHMR 186
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KPY C QC +R+A + L H++
Sbjct: 458 MRTHTGEKPYKCDQCDYSAAQKSALDRHLAKHTGDKPYKCDQCGYRTARKSHLSEHMR 515
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 142 DPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+P + C+ CDY + + + H+ HTG+KPY CG+C +R+ + L H++
Sbjct: 3 EPGEKPYKCHQCDYCTAHKCNLDQHLPKHTGDKPYMCGECGYRTTHKSYLSRHMR 57
Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + + H+ HTGEKPY CG+C +R+A + L H++
Sbjct: 579 YKCDQCDYSTAHKNSLDQHLAKHTGEKPYMCGECWYRTARKSDLVEHMR 627
Score = 45.8 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 131 HCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAG 190
H +RT + C CDY + + H+ HTG+KPY CG+C +R+ +
Sbjct: 845 HKSALSKHMRTHTGEKPYKCDQCDYSAAKKSNLDQHLAIHTGDKPYMCGECGYRATHKSD 904
Query: 191 LHYHLK 196
L H++
Sbjct: 905 LSKHMR 910
Score = 45.1 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 126 NELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
++L+EH +RT + C CDY + + H+ HTG+KPY CG+C +R+
Sbjct: 620 SDLVEH-------MRTHTGEKNYKCDLCDYSAARKQHLDIHLAKHTGDKPYRCGECGYRT 672
Query: 186 ASVAGLHYHLK 196
+ L H++
Sbjct: 673 SRKGDLSKHMR 683
Score = 45.1 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + + H+RTHTGEKPY C QC + ++ L HL
Sbjct: 37 YMCGECGYRTTHKSYLSRHMRTHTGEKPYKCDQCNYSASQKCNLDQHL 84
Score = 45.1 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 133 RTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLH 192
R +RT + C C+Y + + + H+ HTG+KPY CG+C +R+ L
Sbjct: 396 RHLSEHMRTHTGEKPYKCDQCNYSAAQMSNLYRHLAKHTGDKPYMCGECGYRATQKGHLS 455
Query: 193 YHLK 196
H++
Sbjct: 456 NHMR 459
Score = 43.5 bits (101), Expect = 0.043, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTG+KPY CG+C +R+ + L H++
Sbjct: 806 YKCDQCDYSAAKKFNLDQHLAIHTGDKPYMCGECGYRATHKSALSKHMR 854
Score = 43.5 bits (101), Expect = 0.046, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + H+RTHTGEKP+ C QC + +A L HL K
Sbjct: 110 YMCGECGYRAPRESHFYRHMRTHTGEKPFKCAQCDYSAARKFSLEQHLAK 159
Score = 43.1 bits (100), Expect = 0.056, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + H+ HT KPY CG+C FR+ L H++
Sbjct: 741 MRTHTGEKPYKCDQCDYSAAHKSNLNRHLAKHTDAKPYMCGECGFRTTQKCHLSEHMR 798
Score = 43.1 bits (100), Expect = 0.057, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 31/57 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + C C+Y + + SH+ H+ EKPY CG+C +R+A L+ H+
Sbjct: 185 MRTHTGEKPYKCDQCNYSAAWKSSLDSHLAKHSCEKPYMCGECGYRTAERRNLYRHM 241
Score = 41.6 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H++ HTGE PY C QC + +A L HL K
Sbjct: 551 YMCGECGYRTTRKSHLSKHMKIHTGENPYKCDQCDYSTAHKNSLDQHLAK 600
Score = 41.2 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C + + + H+R HTGEKPY C QC + +A L HL
Sbjct: 778 YMCGECGFRTTQKCHLSEHMRNHTGEKPYKCDQCDYSAAKKFNLDQHL 825
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 121 LSTNLNELIEHCRTCK-SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACG 179
+ T+ E C C S R + C Y + + HI TH G KPY C
Sbjct: 269 MRTHTGEKPYKCGQCDYSAARKSTLDRHLARHTCGYRTTQKSDLSKHIGTHAGVKPYNCD 328
Query: 180 QCAFRSASVAGLHYHLKK 197
QC + +A + L+ +L K
Sbjct: 329 QCDYSAAQTSTLNINLAK 346
Score = 37.7 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEK Y C C + +A L HL K
Sbjct: 607 YMCGECWYRTARKSDLVEHMRTHTGEKNYKCDLCDYSAARKQHLDIHLAK 656
>gi|338723599|ref|XP_001916846.2| PREDICTED: LOW QUALITY PROTEIN: RE1-silencing transcription
factor-like [Equus caballus]
Length = 1039
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 44/113 (38%), Gaps = 17/113 (15%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC-----------KSMIRTDP 143
C C Y N + + + K NE + C C K + P
Sbjct: 217 CDRCGY-----NTNRYDHYTAHLKHHTRAGDNERVYKCIICTYTTVSEYHWRKHLXNHFP 271
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C+YFS H+RTHTGE+PY C C + S+ L H++
Sbjct: 272 -RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 323
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 80 KHCHSQLSHLDLLDHCKTCSYMI------RPNANNTFSPFCIYCKAV--LSTNLNELIEH 131
KH H++ + + C C+Y R + N F C S N ++H
Sbjct: 235 KH-HTRAGDNERVYKCIICTYTTVSEYHWRKHLXNHFPRKVYTCGKCNYFSDRKNNYVQH 293
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C C Y S + H+RTH+GEKP+ C QC++ +++ +
Sbjct: 294 -------VRTHTGERPYKCELCPYSSSQKTHLTRHMRTHSGEKPFKCDQCSYVASNQHEV 346
Query: 192 HYHLKKTYH 200
H ++ ++
Sbjct: 347 TRHARQVHN 355
Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
LC + SQ +HL H +T ++ PF C C V ++N +E+ H R
Sbjct: 307 LCPYSSSQKTHLT--RHMRT---------HSGEKPFKCDQCSYV-ASNQHEVTRHAR--- 351
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ P C CDY + + + H+ H + + C C + ++ L YH K
Sbjct: 352 -QVHNGP--KPLNCPHCDYKTADRSNFKKHVELHVNPRQFNCPVCDYAASKKCNLQYHFK 408
Query: 197 KTY 199
+
Sbjct: 409 SKH 411
>gi|198463116|ref|XP_001352693.2| GA21187 [Drosophila pseudoobscura pseudoobscura]
gi|198151119|gb|EAL30192.2| GA21187 [Drosophila pseudoobscura pseudoobscura]
Length = 800
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C +C++ T+ ELI H R T HK C C Y S + +R H+ HTGE
Sbjct: 344 CKHCESAFVTS-GELIRHTR----YKHTKEKPHK--CTECSYASVELTKLRRHMTCHTGE 396
Query: 174 KPYACGQCAFRSASVAGLHYHL 195
+PY C C + S + L HL
Sbjct: 397 RPYQCPHCTYASQDMFKLKRHL 418
Score = 41.6 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 16/117 (13%)
Query: 79 CKHCHSQ-LSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKS 137
CKHC S ++ +L+ H + +P+ C C + S L +L H TC +
Sbjct: 344 CKHCESAFVTSGELIRHTRYKHTKEKPHK-------CTEC-SYASVELTKLRRH-MTCHT 394
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
R P++ C C Y S ++ ++ H+ HTGEK Y C C R L H
Sbjct: 395 GER--PYQ----CPHCTYASQDMFKLKRHLVVHTGEKRYQCDICKSRFTQSNSLKAH 445
>gi|350584989|ref|XP_003355835.2| PREDICTED: transcriptional repressor CTCF-like [Sus scrofa]
gi|426242523|ref|XP_004015122.1| PREDICTED: transcriptional repressor CTCF isoform 3 [Ovis aries]
Length = 399
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ R F C CDY M H RTHTGE
Sbjct: 141 CRYCDAVFHERY-ALIQHQKSHKNEKR-------FKCDQCDYACRQERHMIMHKRTHTGE 192
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 193 KPYACSHCDKTFRQKQLLDMHF---KRYH 218
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 5 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 64
Query: 190 GLHYHLK 196
L H++
Sbjct: 65 KLKRHMR 71
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 39 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 98
>gi|195174426|ref|XP_002027975.1| GL21090 [Drosophila persimilis]
gi|194115685|gb|EDW37728.1| GL21090 [Drosophila persimilis]
Length = 800
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C +C++ T+ ELI H R T HK C C Y S + +R H+ HTGE
Sbjct: 344 CKHCESAFVTS-GELIRHTR----YKHTKEKPHK--CTECSYASVELTKLRRHMTCHTGE 396
Query: 174 KPYACGQCAFRSASVAGLHYHL 195
+PY C C + S + L HL
Sbjct: 397 RPYQCPHCTYASQDMFKLKRHL 418
Score = 41.6 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 16/117 (13%)
Query: 79 CKHCHSQ-LSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKS 137
CKHC S ++ +L+ H + +P+ C C + S L +L H TC +
Sbjct: 344 CKHCESAFVTSGELIRHTRYKHTKEKPHK-------CTEC-SYASVELTKLRRH-MTCHT 394
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
R P++ C C Y S ++ ++ H+ HTGEK Y C C R L H
Sbjct: 395 GER--PYQ----CPHCTYASQDMFKLKRHLVVHTGEKRYQCDICKSRFTQSNSLKAH 445
>gi|402908749|ref|XP_003917098.1| PREDICTED: transcriptional repressor CTCF-like, partial [Papio
anubis]
Length = 452
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 333 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 42.7 bits (99), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 367 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 426
>gi|383411355|gb|AFH28891.1| zinc finger protein 40 [Macaca mulatta]
Length = 2718
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 106 ANNTFSPFC-IYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH--KFVCYACDYFSYNIGC 162
AN+T SP IY +++ +N+ +E + C +++ + K++C C+
Sbjct: 363 ANSTQSPPTPIYNSTHVASVVNQSVE--QMCNLLLKDQKPKKQGKYICEYCNRACAKPSV 420
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ HIR+HTGE+PY C C F + + L+ H K H
Sbjct: 421 LLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAH 458
Score = 44.7 bits (104), Expect = 0.024, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 2085 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 2140
>gi|355748234|gb|EHH52717.1| immunodeficiency virus type I enhancer-binding protein 1 [Macaca
fascicularis]
Length = 2718
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 106 ANNTFSPFC-IYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH--KFVCYACDYFSYNIGC 162
AN+T SP IY +++ +N+ +E + C +++ + K++C C+
Sbjct: 363 ANSTQSPPTPIYNSTHVASVVNQSVE--QMCNLLLKDQKPKKQGKYICEYCNRACAKPSV 420
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ HIR+HTGE+PY C C F + + L+ H K H
Sbjct: 421 LLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAH 458
Score = 44.7 bits (104), Expect = 0.024, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 2085 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 2140
>gi|355561325|gb|EHH17957.1| immunodeficiency virus type I enhancer-binding protein 1 [Macaca
mulatta]
Length = 2718
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 106 ANNTFSPFC-IYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH--KFVCYACDYFSYNIGC 162
AN+T SP IY +++ +N+ +E + C +++ + K++C C+
Sbjct: 363 ANSTQSPPTPIYNSTHVASVVNQSVE--QMCNLLLKDQKPKKQGKYICEYCNRACAKPSV 420
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ HIR+HTGE+PY C C F + + L+ H K H
Sbjct: 421 LLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAH 458
Score = 44.7 bits (104), Expect = 0.024, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 2085 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 2140
>gi|351707795|gb|EHB10714.1| Zinc finger protein 40 [Heterocephalus glaber]
Length = 2833
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 102 IRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH--KFVCYACDYFSYN 159
I P ++ P IY +++ +++ +E + C +++ + K++C C+
Sbjct: 450 ISPASSTQSPPMPIYNPTHVASVVSQSVE--QMCNLLLKDQKPKKQGKYICEYCNRACAK 507
Query: 160 IGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ HIR+HTGE+PY C C F + + L+ H K H
Sbjct: 508 PSVLLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAH 548
Score = 45.1 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 2165 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 2220
>gi|260832622|ref|XP_002611256.1| hypothetical protein BRAFLDRAFT_147455 [Branchiostoma floridae]
gi|229296627|gb|EEN67266.1| hypothetical protein BRAFLDRAFT_147455 [Branchiostoma floridae]
Length = 297
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 30/51 (58%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+FVC CDY + + + H RTHTGEKPY C QC + +A L HL K
Sbjct: 14 RFVCTECDYRTASKANLVKHTRTHTGEKPYKCEQCDYSAAQKGTLDLHLTK 64
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C C ++ N L++H RT P++ C CDY + G + H+ HTGE
Sbjct: 17 CTECDYRTASKAN-LVKHTRT---HTGEKPYK----CEQCDYSAAQKGTLDLHLTKHTGE 68
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
KP+ CGQC +R+A+ + L H++
Sbjct: 69 KPFMCGQCGYRTANRSYLSVHMR 91
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + G + H HTGEKPY CG+C +R+ + L H++K
Sbjct: 99 YKCDMCDYSAAQKGHLDDHRARHTGEKPYMCGECGYRTDRKSNLSRHMRK 148
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKPY CG+C FR+++ L H++
Sbjct: 212 YKCDQCDYSAAEKSSLDRHMPRHTGEKPYMCGECGFRTSARFSLTVHMR 260
Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 148 FVCYACDYFSYNIG-CMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY S + + H+ H GEKP+ CG+C FR+A + L H+KK
Sbjct: 155 YKCDQCDYSSIDKRRTLDRHMTQHAGEKPFKCGECGFRTAFKSSLATHIKK 205
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F C C + + + +HI+ HTGEKPY C QC + +A + L H+
Sbjct: 184 FKCGECGFRTAFKSSLATHIKKHTGEKPYKCDQCDYSAAEKSSLDRHM 231
Score = 39.7 bits (91), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
++C C Y + + H+R HTGEKPY C QC + S
Sbjct: 127 YMCGECGYRTDRKSNLSRHMRKHTGEKPYKCDQCDYSS 164
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H+R+HTGEKPY C QC + + L H+ K
Sbjct: 240 YMCGECGFRTSARFSLTVHMRSHTGEKPYKCDQCNYSAPKKGDLDSHMAK 289
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
F+C C Y + N + H+R+HTG KPY C C + +A L H
Sbjct: 71 FMCGQCGYRTANRSYLSVHMRSHTGVKPYKCDMCDYSAAQKGHLDDH 117
>gi|62089172|dbj|BAD93030.1| CCCTC-binding factor (zinc finger protein) variant [Homo sapiens]
Length = 443
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ R F C CDY M H RTHTGE
Sbjct: 185 CRYCDAVFHERY-ALIQHQKSHKNEKR-------FKCDQCDYACRQERHMIMHKRTHTGE 236
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 237 KPYACSHCDKTFRQKQLLDMHF---KRYH 262
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 49 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 108
Query: 190 GLHYHLK 196
L H++
Sbjct: 109 KLKRHMR 115
Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 83 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 142
>gi|426241223|ref|XP_004014491.1| PREDICTED: transcriptional repressor CTCFL [Ovis aries]
Length = 627
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 45/89 (50%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H +T K+ R F+ ++ YAC + M HIRTHTGE
Sbjct: 440 CRYCPAVFHDRYT-LIQHQKTHKNEKR---FKCEYCSYACKQERH----MTVHIRTHTGE 491
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KP+ C C FR + +H+ K YH
Sbjct: 492 KPFVCLTCNKCFRQQQLLNVHF---KKYH 517
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ HIR+HTGE+P+ C C++ S
Sbjct: 304 TSGELVRHRRYKHTHEKPFKCSVCKYASVEASKLKRHIRSHTGERPFQCSLCSYASKDTY 363
Query: 190 GLHYHLK 196
L H++
Sbjct: 364 KLKRHMR 370
Score = 44.7 bits (104), Expect = 0.023, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 338 KRHIRSHTGERPFQCSLCSYASKDTYKLKRHMRTHSGEKPYECHICHARFTQSGTMKMHV 397
Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 129 IEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSA 186
+E T K+ + + F C C + S + + H++ H+ EKP+ C C AFR+
Sbjct: 218 LEKPSTTKNQKKAKEVKRTFHCSFCKFTSSRVSSLNRHVKIHSTEKPHVCHLCLKAFRTV 277
Query: 187 SVAGLH 192
++ H
Sbjct: 278 TLLRNH 283
Score = 36.2 bits (82), Expect = 7.5, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 10/88 (11%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C +CK S+ ++ L H ++ VC+ C + +R+H+ THTG
Sbjct: 239 CSFCK-FTSSRVSSLNRH-------VKIHSTEKPHVCHLCLKAFRTVTLLRNHVNTHTGT 290
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTY 199
+P+ C C AF ++ H K T+
Sbjct: 291 RPHKCADCDMAFVTSGELVRHRRYKHTH 318
>gi|441629018|ref|XP_003275677.2| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 846 [Nomascus
leucogenys]
Length = 559
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 73/197 (37%), Gaps = 15/197 (7%)
Query: 6 TPTLAKVFLVILEPTLERNRTNITSDVYIA---VLVFSNLTFFITAQLVLMSLDQILNLN 62
+P L + ++ R+N +Y + VFS F +T + +
Sbjct: 113 SPLLQDISAERSPNGIQLERSNTAEKLYDSNHSGKVFSEHPFLMTHMRTHIGEKTSEDSQ 172
Query: 63 LSVLLVTTIPTQNHSLCKHCHSQLSHLDLLDHCKTCSY---MIRPNANNTFSPFCIYCKA 119
L P HS K H++ + H K C+ + R N +T C CK
Sbjct: 173 SGKALRKNFP---HSFYKKSHAEGKTPKCVKHEKACNQFPNLTRQNKTHTQEKLC-ECKD 228
Query: 120 VLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACG 179
T LN+ + K IR+ +VC C N + H R H+GEKPY C
Sbjct: 229 CWRTFLNQ-----SSLKVHIRSHSGDKHYVCKECGKAFSNSSHLIGHGRIHSGEKPYVCK 283
Query: 180 QCAFRSASVAGLHYHLK 196
+C GL H++
Sbjct: 284 ECGKAFTQSTGLKLHIR 300
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 28/58 (48%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C N + H+R HTGEKP+ C +C A +GL HL+
Sbjct: 411 MRTHTGEKPYDCKECGKPFNNSSMLSQHVRIHTGEKPFECKECGKAFAQSSGLSTHLR 468
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 27/58 (46%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IR + C C + C+ H+R H+GEKPY C +C +GL H++
Sbjct: 355 IRIHTGEKPYECKECGKAFIHSSCLTKHVRIHSGEKPYLCKECGKAFTRSSGLVLHMR 412
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 27/59 (45%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+R F C C + +H+RTHTGEK Y C +C A L+ H++K
Sbjct: 439 VRIHTGEKPFECKECGKAFAQSSGLSTHLRTHTGEKAYECKECGKAFACSKNLNMHMRK 497
Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 12/87 (13%)
Query: 121 LSTNLNELIEHCRTCKSM----------IRTDPFRHKFVCYACDY-FSYNIGCMRSHIRT 169
L T+ E C+ C +R + C C F Y+ C+ H+RT
Sbjct: 467 LRTHTGEKAYECKECGKAFACSKNLNMHMRKHTGEKPYACRECGKAFKYST-CLNVHMRT 525
Query: 170 HTGEKPYACGQCAFRSASVAGLHYHLK 196
H+G KPY C +C + L HL+
Sbjct: 526 HSGAKPYECKKCGKNFTQSSALAKHLR 552
>gi|73957277|ref|XP_864453.1| PREDICTED: transcriptional repressor CTCF isoform 3 [Canis lupus
familiaris]
Length = 399
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ R F C CDY M H RTHTGE
Sbjct: 141 CRYCDAVFHERY-ALIQHQKSHKNEKR-------FKCDQCDYACRQERHMIMHKRTHTGE 192
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 193 KPYACSHCDKTFRQKQLLDMHF---KRYH 218
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 5 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 64
Query: 190 GLHYHLK 196
L H++
Sbjct: 65 KLKRHMR 71
Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 39 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 98
>gi|260834223|ref|XP_002612111.1| hypothetical protein BRAFLDRAFT_62643 [Branchiostoma floridae]
gi|229297484|gb|EEN68120.1| hypothetical protein BRAFLDRAFT_62643 [Branchiostoma floridae]
Length = 669
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C CD +G +++H+RTHT EKPY C QC+ + + + + H+
Sbjct: 261 KQHMRTHTGEKPYSCEKCDKQFSRLGSLKTHMRTHTAEKPYKCEQCSKQFSQLGNMKTHM 320
Query: 196 KKTY 199
K+T+
Sbjct: 321 KRTH 324
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Query: 118 KAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHI 167
K + T+ E C C K+ +RT C C ++G M+ H+
Sbjct: 149 KKHMRTHTGEKPHKCEECSRQFSELGNLKTHMRTHTGEKPHRCEECSRQFSDLGSMKKHM 208
Query: 168 RTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RTHTGEKPY C +C+ + + + L H++
Sbjct: 209 RTHTGEKPYRCDECSRQFSDLGNLKKHIR 237
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T KS +RT + C C +G ++ H+RTHTGE+PY C +C+ + + + L
Sbjct: 511 TLKSHMRTHTGEKPYKCEQCSKQFSQLGHLKRHMRTHTGERPYKCEECSKQFSELGSLKK 570
Query: 194 HLK 196
H++
Sbjct: 571 HMR 573
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IRT + C C +G + H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 429 KKHIRTHTGEKPYRCEKCSKQFSQLGYLEKHMRTHTGEKPYRCEECSKQFSQLCNLEKHM 488
Query: 196 K 196
K
Sbjct: 489 K 489
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C +G ++ H+RTHTGEKPY C +C+ + +++ L H+
Sbjct: 541 KRHMRTHTGERPYKCEECSKQFSELGSLKKHMRTHTGEKPYRCDECSKQFSTLYNLKNHI 600
Query: 196 K 196
+
Sbjct: 601 R 601
Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
K IRT + C C +G ++SH+RTHTGEKPY C +C+
Sbjct: 339 KRHIRTHTGEKPYRCEECSKQFSRMGHLKSHMRTHTGEKPYRCEECS 385
Score = 42.4 bits (98), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
KS +RT + C C + ++ H++THTGEKPY C QC+ + + ++ L H+
Sbjct: 93 KSHVRTHTGEKPYRCEECSRQFSVLNHLKGHMKTHTGEKPYRCEQCSRQFSELSSLKKHM 152
Query: 196 K 196
+
Sbjct: 153 R 153
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 53/121 (43%), Gaps = 21/121 (17%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C Q S L L +M + C C S L L +H RT
Sbjct: 527 CEQCSKQFSQLGHLK-----RHMRTHTGERPYK--CEECSKQFS-ELGSLKKHMRT---H 575
Query: 139 IRTDPFRHKFVCYAC-DYFS--YNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
P+R C C FS YN+ ++HIRTHTGEKPY C +C+ + + L+ H+
Sbjct: 576 TGEKPYR----CDECSKQFSTLYNL---KNHIRTHTGEKPYKCDECSKQFGQLGSLNGHM 628
Query: 196 K 196
+
Sbjct: 629 R 629
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 152 ACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
CD ++ HIRTHTGEKPY C +C+ + + + L H++
Sbjct: 327 ECDKQFRRASELKRHIRTHTGEKPYRCEECSKQFSRMGHLKSHMR 371
>gi|432094541|gb|ELK26095.1| Zinc finger protein 333 [Myotis davidii]
Length = 700
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 123 TNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC- 181
T +++ T KS +RT + C C +R H RTHTG+KPYAC +C
Sbjct: 606 TTCGQVLSRLSTLKSHMRTHTGEKPYACQECGRAFSEPSSLRKHARTHTGKKPYACQECG 665
Query: 182 -AFRSASVA 189
AF SA ++
Sbjct: 666 RAFASADIS 674
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 37/157 (23%), Positives = 58/157 (36%), Gaps = 43/157 (27%)
Query: 79 CKHCHSQLSHL-DLLDH-----------CKTCSYMIRPNAN--------NTFSPF-CIYC 117
C C + DL+ H C+ C + + ++N PF C C
Sbjct: 437 CNKCEKSFRYSSDLIRHEKTHTSEKYFECQECRHAFKYSSNLRRHMRTHTGEKPFECSQC 496
Query: 118 KAVLSTNLNELIEH----------CRTC----------KSMIRTDPFRHKFVCYACDYFS 157
+ N N ++ C+ C +S +RT F C C
Sbjct: 497 GKTFTRNFNLILHQRNHTGEKPYECKDCGKAFNQPSSLRSHMRTHTGEKPFECSQCGKAF 556
Query: 158 YNIGCMRSHIRTHTGEKPYACGQCA--FRSASVAGLH 192
+++H+RTHT EKPY C QC FR+++ +H
Sbjct: 557 REHSSLKTHLRTHTREKPYECNQCGKPFRTSTHLNVH 593
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 10/89 (11%)
Query: 118 KAVLSTNLNELIEHCRTCKSMIRTDPFR--HK--------FVCYACDYFSYNIGCMRSHI 167
K L T+ E C C RT HK + C C + ++SH+
Sbjct: 563 KTHLRTHTREKPYECNQCGKPFRTSTHLNVHKRIHTGEKLYECTTCGQVLSRLSTLKSHM 622
Query: 168 RTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RTHTGEKPYAC +C + + L H +
Sbjct: 623 RTHTGEKPYACQECGRAFSEPSSLRKHAR 651
>gi|402882163|ref|XP_003904620.1| PREDICTED: transcriptional repressor CTCFL isoform 1 [Papio anubis]
gi|402882165|ref|XP_003904621.1| PREDICTED: transcriptional repressor CTCFL isoform 2 [Papio anubis]
Length = 667
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H +T K+ +F C C Y M +HIRTHTGE
Sbjct: 464 CRYCSAVFHERY-ALIQHQKTHKN-------EKRFKCEHCSYACKQERHMTAHIRTHTGE 515
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KP+ C C FR + +H+ + YH
Sbjct: 516 KPFTCLSCNKCFRQKQLLNVHF---RKYH 541
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 328 TSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 387
Query: 190 GLHYHLK 196
L H++
Sbjct: 388 KLKRHMR 394
Score = 43.9 bits (102), Expect = 0.035, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +R+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 362 KRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEKPYECHICHTRFTQSGTMKIHI 421
Score = 39.3 bits (90), Expect = 0.90, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 129 IEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSA 186
+E ++ K+ +T + F C C + S + H++THT EKP+ C C FR+
Sbjct: 242 VEKAKSTKNQRKTKGAKRTFHCDVCMFTSSRMSSFNRHMKTHTNEKPHLCHLCLKTFRTV 301
Query: 187 SVAGLH 192
++ H
Sbjct: 302 TLLRNH 307
Score = 35.8 bits (81), Expect = 9.8, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKTY 199
+C+ C + +R+H+ THTG +PY C C AF ++ H K T+
Sbjct: 290 LCHLCLKTFRTVTLLRNHVNTHTGTRPYKCNDCNMAFVTSGELVRHRRYKHTH 342
>gi|355784365|gb|EHH65216.1| hypothetical protein EGM_01946 [Macaca fascicularis]
Length = 667
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H +T K+ +F C C Y M +HIRTHTGE
Sbjct: 464 CRYCSAVFHERY-ALIQHQKTHKN-------EKRFKCEHCSYACKQERHMTAHIRTHTGE 515
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KP+ C C FR + +H+ + YH
Sbjct: 516 KPFTCLSCNKCFRQKQLLNVHF---RKYH 541
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 328 TSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 387
Query: 190 GLHYHLK 196
L H++
Sbjct: 388 KLKRHMR 394
Score = 43.9 bits (102), Expect = 0.034, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +R+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 362 KRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEKPYECHICHTRFTQSGTMKIHI 421
Score = 39.3 bits (90), Expect = 0.90, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 129 IEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSA 186
+E ++ K+ +T + F C C + S + H++THT EKP+ C C FR+
Sbjct: 242 VEKAKSTKNQRKTKGAKRTFHCDVCMFTSSRMSSFNRHMKTHTNEKPHLCHLCLKTFRTV 301
Query: 187 SVAGLH 192
++ H
Sbjct: 302 TLLRNH 307
Score = 35.8 bits (81), Expect = 9.8, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKTY 199
+C+ C + +R+H+ THTG +PY C C AF ++ H K T+
Sbjct: 290 LCHLCLKTFRTVTLLRNHVNTHTGTRPYKCNDCNMAFVTSGELVRHRRYKHTH 342
>gi|338726888|ref|XP_001495524.3| PREDICTED: zinc finger protein 333 [Equus caballus]
Length = 613
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 39/88 (44%), Gaps = 13/88 (14%)
Query: 112 PF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
PF C C + N N L+ R+ + C AC +RSH RTH
Sbjct: 388 PFACAQCGKAFTRNFNLLLHR--------RSHTGEKPYACPACGKTFNQPSSLRSHARTH 439
Query: 171 TGEKPYACGQC--AFRSASVAGLHYHLK 196
TGEKP+AC C AFR S L HL+
Sbjct: 440 TGEKPFACAHCGKAFREPS--SLKTHLR 465
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 39/89 (43%), Gaps = 10/89 (11%)
Query: 118 KAVLSTNLNELIEHCRTCKSMIRTDPFR--HKFV--------CYACDYFSYNIGCMRSHI 167
K L T+ E C C RT H+ V C C + +RSH+
Sbjct: 461 KTHLRTHTREKPYACEQCGKPFRTSTHLSVHRRVHTGEKPYGCATCGQVLSRLSTLRSHM 520
Query: 168 RTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RTHTGEKPYAC QC + + L H++
Sbjct: 521 RTHTGEKPYACQQCGRAFSEPSSLRKHVR 549
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 36/81 (44%), Gaps = 10/81 (12%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C C VLS T +S +RT + C C +R H+RTHTG
Sbjct: 503 CATCGQVLS--------RLSTLRSHMRTHTGEKPYACQQCGRAFSEPSSLRKHVRTHTGH 554
Query: 174 KPYACGQC--AFRSASVAGLH 192
KPYAC QC AF +S +H
Sbjct: 555 KPYACQQCGRAFGQSSHLTVH 575
Score = 40.8 bits (94), Expect = 0.28, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 20/43 (46%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
RT F C C +R H R HTGEKP+AC QC
Sbjct: 353 RTHSAERGFACRECGRAFKCPSNLRRHARAHTGEKPFACAQCG 395
Score = 36.2 bits (82), Expect = 7.2, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 6/67 (8%)
Query: 135 CKSMIRTDPFRHK----FVCYAC-DYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
C S +R H F C C F+ N + H R+HTGEKPYAC C +
Sbjct: 372 CPSNLRRHARAHTGEKPFACAQCGKAFTRNFNLLL-HRRSHTGEKPYACPACGKTFNQPS 430
Query: 190 GLHYHLK 196
L H +
Sbjct: 431 SLRSHAR 437
>gi|344296592|ref|XP_003419990.1| PREDICTED: transcriptional repressor CTCFL [Loxodonta africana]
Length = 748
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC V LI+H +T K+ +F C C Y M +H+RTHTGE
Sbjct: 469 CRYCPDVFHERY-ALIQHQKTHKN-------EKRFKCEHCSYACKQERHMTAHVRTHTGE 520
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTYH 200
KP+AC C R L+ H KK YH
Sbjct: 521 KPFACLSCNKRFRQKQLLNTHFKK-YH 546
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T +IR +RH F C C Y S + ++ H R+HTGE+P+ C C++ S
Sbjct: 333 TSGELIRHRRYRHTHEKPFKCSMCKYASVEVSKLKRHARSHTGERPFPCHLCSYASRDTY 392
Query: 190 GLHYHLK 196
L H++
Sbjct: 393 KLKRHMR 399
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 112 PF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
PF C CK S +++L H R+ F C+ C Y S + ++ H+RTH
Sbjct: 350 PFKCSMCKYA-SVEVSKLKRHARSHTG-------ERPFPCHLCSYASRDTYKLKRHMRTH 401
Query: 171 TGEKPYACGQCAFRSASVAGLHYHL 195
+GEKPY C C R + H+
Sbjct: 402 SGEKPYECHVCHARFTQSGTMKIHI 426
Score = 42.0 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 129 IEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSA 186
+E ++ K +T + F C C + S + H++THT EKP+ C C AFR+
Sbjct: 247 VEKPKSAKKRRKTKGVKRAFRCDICTFTSARLSSFNRHVKTHTNEKPHTCHLCLKAFRTV 306
Query: 187 SVAGLH 192
++ H
Sbjct: 307 TLLRNH 312
>gi|297290066|ref|XP_002803652.1| PREDICTED: zinc finger protein 40-like isoform 1 [Macaca mulatta]
gi|297290068|ref|XP_002803653.1| PREDICTED: zinc finger protein 40-like isoform 2 [Macaca mulatta]
Length = 2718
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 106 ANNTFSPFC-IYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH--KFVCYACDYFSYNIGC 162
AN+T SP IY +++ +N+ +E + C +++ + K++C C+
Sbjct: 363 ANSTQSPPTPIYNSTHVASVVNQSVE--QMCNLLLKDQKPKKQGKYICEYCNRACAKPSV 420
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ HIR+HTGE+PY C C F + + L+ H K H
Sbjct: 421 LLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAH 458
Score = 44.3 bits (103), Expect = 0.026, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 2085 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 2140
>gi|260823102|ref|XP_002604022.1| hypothetical protein BRAFLDRAFT_71689 [Branchiostoma floridae]
gi|229289347|gb|EEN60033.1| hypothetical protein BRAFLDRAFT_71689 [Branchiostoma floridae]
Length = 240
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + G + H+ H+GEKPY CG+C + +A + L H++
Sbjct: 103 MRTHTGERPYKCDKCDYSAAQKGDLNKHVAKHSGEKPYMCGECGYTAAQKSDLSKHMR 160
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+R HTGEKPY C +C +R+A + L H++
Sbjct: 140 YMCGECGYTAAQKSDLSKHMRIHTGEKPYMCRECGYRTAKKSHLSRHMR 188
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + +H+RTHTGE+PY C +C + +A L+ H+ K
Sbjct: 84 YMCGECGYRTTRKSHLSAHMRTHTGERPYKCDKCDYSAAQKGDLNKHVAK 133
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTG+KPY C QC F +A L HL
Sbjct: 168 YMCRECGYRTAKKSHLSRHMRTHTGDKPYKCDQCDFSAAQKVHLDSHL 215
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G M ++ HTGEKPY CG+C +R+ + L H++
Sbjct: 69 GNMGRYVVKHTGEKPYMCGECGYRTTRKSHLSAHMR 104
>gi|321476846|gb|EFX87806.1| hypothetical protein DAPPUDRAFT_311909 [Daphnia pulex]
Length = 3207
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Query: 104 PNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGC 162
P N SP C C A ++ +EL+EH MI P K+ C C + N
Sbjct: 1123 PTRPNYTSPVQCKLC-AFHTSKRSELLEHV-----MIHALPTNCKYRCLLCGFTETNFFD 1176
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
M H+ HTGE Y C C F+ A AG+ +H+ +
Sbjct: 1177 MLDHVGGHTGEFRYRCNYCNFQVAHRAGIKHHMNSMH 1213
>gi|260832596|ref|XP_002611243.1| hypothetical protein BRAFLDRAFT_71202 [Branchiostoma floridae]
gi|229296614|gb|EEN67253.1| hypothetical protein BRAFLDRAFT_71202 [Branchiostoma floridae]
Length = 286
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CDY + G ++ H+ HTG KPY CG+C +R A + L H++
Sbjct: 197 LRTHTGEKPFKCAQCDYSATQKGSLKQHMAKHTGRKPYLCGECGYRCARRSHLSEHMR 254
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
IR + C CDY + G ++ H+ HTG KPY CG+C +R+A L H+++
Sbjct: 29 IRRHTGEKPYKCDLCDYSATQKGSLKQHMAKHTGRKPYMCGECGYRTAHRFHLSKHMRR 87
Score = 43.5 bits (101), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY S + H+ HTGEKPY CG+C +R+A L HL+
Sbjct: 150 YKCDQCDYASATKCNLDQHMARHTGEKPYMCGECDYRTAVKLRLSQHLR 198
Score = 42.7 bits (99), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C CDY + + H+RTHTGEKP+ C QC + + L H+ K
Sbjct: 178 YMCGECDYRTAVKLRLSQHLRTHTGEKPFKCAQCDYSATQKGSLKQHMAK 227
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+FVC C Y + + + HIR HTGEKPY C C + + L H+ K
Sbjct: 9 RFVCETCGYRTSDKSSLIVHIRRHTGEKPYKCDLCDYSATQKGSLKQHMAK 59
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HTGEKPY C QC + SA+ L H+ +
Sbjct: 122 YICGKCGYRTAVRSHLTGHMRKHTGEKPYKCDQCDYASATKCNLDQHMAR 171
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + H+ HTG KPY CG+C +R+A + L H++K
Sbjct: 94 YKCDQCDYSTAEKSDLVRHMAKHTGNKPYICGKCGYRTAVRSHLTGHMRK 143
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
R ++C C Y + + + H+R HTGEKPY C QC + +A + L H+ K
Sbjct: 63 RKPYMCGECGYRTAHRFHLSKHMRRHTGEKPYKCDQCDYSTAEKSDLVRHMAK 115
>gi|260787829|ref|XP_002588954.1| hypothetical protein BRAFLDRAFT_89145 [Branchiostoma floridae]
gi|229274126|gb|EEN44965.1| hypothetical protein BRAFLDRAFT_89145 [Branchiostoma floridae]
Length = 2669
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
IRT + C CDY + + H+ HTG+KPY CG+C +R+A L H++K
Sbjct: 2549 IRTHTGEKPYKCDQCDYSATRKYHLDQHLAKHTGDKPYMCGECGYRTAQKPNLSQHMRK 2607
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + H+ HTG+KPY CG+C +R+A + L H++
Sbjct: 1328 MRTHTGDKPYKCDQCDYSAARMSTLNQHLAKHTGDKPYMCGECGYRAAKKSHLTEHIR 1385
Score = 50.1 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KPY CG+C +R+A + L H++
Sbjct: 1178 MRTHTGEKPYKCDKCDYSAATKSTLDKHLAKHTGDKPYMCGECGYRTARKSDLSIHMR 1235
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKP+ C QC F +A L YHL K
Sbjct: 1103 YMCGECGYRTARKSHLVEHMRTHTGEKPFKCDQCDFSAAKKFTLDYHLAK 1152
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + H+ HTG+KPY CG+C +R+A + L H++
Sbjct: 2279 MRTHTGEKPYKCDQCDYSAAHKSNLDKHLAKHTGDKPYMCGECGYRTARRSDLSRHMR 2336
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + +H+ HTG KPY CG+C +R+A + L H++
Sbjct: 1935 MRTHTHNKPYKCDQCDYSAAQKSSLDNHLAKHTGYKPYMCGECGYRTALKSNLSIHMR 1992
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 32/61 (52%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
S ++T ++C C Y + + H+RTHTGEKPY C QC + ++ L YH
Sbjct: 44 SQLQTQTSDKPYMCGECAYRTAKKSHLAEHMRTHTGEKPYKCDQCDYSASKKCNLDYHSA 103
Query: 197 K 197
K
Sbjct: 104 K 104
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H RTHTGEKPY C QC + +A + L+ HL K
Sbjct: 1047 YMCGECGYRAARKSQLSEHTRTHTGEKPYKCDQCDYSAAQKSNLNQHLAK 1096
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 12/100 (12%)
Query: 103 RPNANNTFSPFCIYC--KAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNI 160
+P A+ P+ C + ++NL++ +RT + C CDY +
Sbjct: 1851 QPKADTDEKPYMCGCGYRTAYTSNLSK----------HMRTHTGEKPYKCDQCDYSAARK 1900
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ H+ HTG+KPY CG+C +R+ L H++ H
Sbjct: 1901 SHLDYHLAKHTGDKPYMCGECGYRTTQKCNLSIHMRTHTH 1940
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A + L HL K
Sbjct: 167 YMCGECGYRTVYKSYLSQHMRTHTGEKPYKCDQCDYSAAHKSNLDKHLSK 216
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + + H+RTHTGEKPY C QC F +A + L+ HL
Sbjct: 2474 YMCGECGYRTAHKSHLFRHMRTHTGEKPYKCDQCDFSAAEKSTLNQHL 2521
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 31/61 (50%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
S + T ++C C Y + + H+RTHTGEKPY C QC + ++ L YH
Sbjct: 2137 SQLETKTRDKPYMCGQCGYRAAKKSHLAEHMRTHTGEKPYKCDQCDYSASKKCNLDYHSA 2196
Query: 197 K 197
K
Sbjct: 2197 K 2197
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A + L HL K
Sbjct: 2260 YMCGQCGYRAVYKSYLSQHMRTHTGEKPYKCDQCDYSAAHKSNLDKHLAK 2309
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTG+KPY C QC + +A ++ L+ HL K
Sbjct: 1309 YMCGECGYRAAYKSYLSRHMRTHTGDKPYKCDQCDYSAARMSTLNQHLAK 1358
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T S ++ + ++C C Y + + H+RTH G+KPY C QC + +A L Y
Sbjct: 2404 TSVSQQESNAYAKPYMCGECGYRTAWKANLSRHMRTHAGDKPYKCDQCDYSAAHKISLDY 2463
Query: 194 HLKK 197
HL K
Sbjct: 2464 HLAK 2467
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CD+ + + H+ HTG+KPY CG+C +R+A + L H++
Sbjct: 2493 MRTHTGEKPYKCDQCDFSAAEKSTLNQHLAMHTGDKPYMCGECGYRTAKKSHLAEHIR 2550
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 126 NELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
++L EH RT P++ C CDY + + H+ HTG+KPY CG+C +R+
Sbjct: 1060 SQLSEHTRTHTG---EKPYK----CDQCDYSAAQKSNLNQHLAKHTGDKPYMCGECGYRT 1112
Query: 186 ASVAGLHYHLK 196
A + L H++
Sbjct: 1113 ARKSHLVEHMR 1123
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGEKPY C QC F +A L HL
Sbjct: 2028 YMCGECGYRTAQRSNLTGHMRTHTGEKPYKCDQCDFSAARKYSLDQHL 2075
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + H+ HTG+KPY CG+C +R+A + L H++
Sbjct: 2437 MRTHAGDKPYKCDQCDYSAAHKISLDYHLAKHTGDKPYMCGECGYRTAHKSHLFRHMR 2494
Score = 47.0 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KPY CG+C +R+A L H++
Sbjct: 701 MRTHTGDKPYKCDQCDYSAAVKSTLDLHLAIHTGDKPYMCGECGYRTAKKYALAMHMR 758
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + H+ HTG+KPY CG+C + +A + L H++
Sbjct: 186 MRTHTGEKPYKCDQCDYSAAHKSNLDKHLSKHTGDKPYMCGECGYMTARRSDLSRHMR 243
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + +H+ HTG+KPY CG+C +R + L H++
Sbjct: 2614 YKCDQCDYSAAQASTLNNHLAMHTGDKPYMCGECGYRVTQKSHLSKHMR 2662
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CD+ + + H+ H+G+KPY CG+C +R+A + L H++
Sbjct: 1991 MRTHTCYKPYKCDQCDFSAAQRSTLNQHLARHSGDKPYMCGECGYRTAQRSNLTGHMR 2048
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + HIRTHTGEKPY C QC + + L HL K
Sbjct: 1365 YMCGECGYRAAKKSHLTEHIRTHTGEKPYKCDQCDYSATRKYHLDQHLAK 1414
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + HIRTHTGEKPY C QC + + L HL K
Sbjct: 2530 YMCGECGYRTAKKSHLAEHIRTHTGEKPYKCDQCDYSATRKYHLDQHLAK 2579
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 126 NELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
+ L+EH +RT F C CD+ + + H+ HTG+KPY CG+C +R+
Sbjct: 1116 SHLVEH-------MRTHTGEKPFKCDQCDFSAAKKFTLDYHLAKHTGDKPYMCGECGYRT 1168
Query: 186 ASVAGLHYHLK 196
+ L H++
Sbjct: 1169 VLKSDLSIHMR 1179
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTG+KPY C QC + +A + L HL K
Sbjct: 738 YMCGECGYRTAKKYALAMHMRTHTGDKPYKCDQCDYSAAVKSTLDLHLAK 787
Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T +RT + C CDY + + H HTG+KPY CG+C +R+A + L
Sbjct: 1005 TLSQHMRTHTGNKPYKCNQCDYSTARKFSLDQHQAKHTGDKPYMCGECGYRAARKSQLSE 1064
Query: 194 HLK 196
H +
Sbjct: 1065 HTR 1067
Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
S ++ + + ++C C Y + + H+RTHTGEKP+ C QC + +A L HL
Sbjct: 597 SQLKANTGENPYMCGKCGYRTAWESHLSQHMRTHTGEKPFKCDQCDYSAAQKYSLDLHLI 656
Query: 197 K 197
K
Sbjct: 657 K 657
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
C C + ++C C Y + + H+RTHTG+KPY C QC + +A + L
Sbjct: 666 CGECGRHLAKHTGDKPYMCGECGYRTAQKYALSQHMRTHTGDKPYKCDQCDYSAAVKSTL 725
Query: 192 HYHL 195
HL
Sbjct: 726 DLHL 729
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 143 PFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C C + + + H++TH+G+KPY CG+C +R+A + L H++
Sbjct: 962 PYR----CEECGFRTAYRSALSKHMKTHSGDKPYMCGECGYRAARKSTLSQHMR 1011
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
Query: 114 CIYCKAVLSTNLNELIEH-------CRTCKSMIRTDPFRHK----FVCYACDYFSYNIGC 162
C Y AV ST L +H C KS + H ++C C Y +
Sbjct: 771 CDYSAAVKSTLDLHLAKHTGDKPYMCGELKSTLDLHLAIHTGDKPYMCGECKYRTAQKYA 830
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ H+RTHTG+KPY C QC + +A + L HL +
Sbjct: 831 LSMHMRTHTGDKPYKCDQCDYSAAVKSTLDLHLAR 865
Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C +C + +A+ + L HL K
Sbjct: 1159 YMCGECGYRTVLKSDLSIHMRTHTGEKPYKCDKCDYSAATKSTLDKHLAK 1208
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+R+ + C CDY + + H +HTG+KPY CGQC +R+ + L H++
Sbjct: 2223 MRSHTGEKPYKCDQCDYSAARKSTLCQHKASHTGDKPYMCGQCGYRAVYKSYLSQHMR 2280
Score = 44.7 bits (104), Expect = 0.024, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTG KPY C QC + +A L H K
Sbjct: 991 YMCGECGYRAARKSTLSQHMRTHTGNKPYKCNQCDYSTARKFSLDQHQAK 1040
Score = 44.3 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+R+ + C CDY + + H +HTG+KPY CG+C +R+ + L H++
Sbjct: 130 MRSHTGEKPYKCDQCDYSTARKSTLCQHKASHTGDKPYMCGECGYRTVYKSYLSQHMR 187
Score = 43.1 bits (100), Expect = 0.058, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
+RT + C CDY + + H+ HTG+KPY CG+C +R+A
Sbjct: 835 MRTHTGDKPYKCDQCDYSAAVKSTLDLHLARHTGDKPYMCGECGYRTA 882
Score = 43.1 bits (100), Expect = 0.060, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+R HTG KPY C QC + +A + L+ HL
Sbjct: 2586 YMCGECGYRTAQKPNLSQHMRKHTGVKPYKCDQCDYSAAQASTLNNHL 2633
Score = 42.7 bits (99), Expect = 0.089, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHT KPY C QC + +A + L HL K
Sbjct: 1916 YMCGECGYRTTQKCNLSIHMRTHTHNKPYKCDQCDYSAAQKSSLDNHLAK 1965
Score = 42.4 bits (98), Expect = 0.098, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + + H+R+HTGEKPY C QC + +A + L H
Sbjct: 111 YMCGECGYRTARKPDLMKHMRSHTGEKPYKCDQCDYSTARKSTLCQH 157
Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
+RT + C CD+ + + H+ H+G+KPY CG+C +R+A
Sbjct: 2047 MRTHTGEKPYKCDQCDFSAARKYSLDQHLAVHSGDKPYMCGECGYRTA 2094
Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + + H+R+HTGEKPY C QC + +A + L H
Sbjct: 2204 YMCGECGYRTARKPDLMKHMRSHTGEKPYKCDQCDYSAARKSTLCQH 2250
Score = 42.0 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 18/76 (23%)
Query: 139 IRTDPFRHKFVCYACDYFS------------------YNIGCMRSHIRTHTGEKPYACGQ 180
+RT F C CDY + Y G H+ HTG+KPY CG+
Sbjct: 627 MRTHTGEKPFKCDQCDYSAAQKYSLDLHLIKHTGDKPYMCGECGRHLAKHTGDKPYMCGE 686
Query: 181 CAFRSASVAGLHYHLK 196
C +R+A L H++
Sbjct: 687 CGYRTAQKYALSQHMR 702
Score = 41.2 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H HTG+K Y CG+C +R+A L H++
Sbjct: 74 MRTHTGEKPYKCDQCDYSASKKCNLDYHSAKHTGDKLYMCGECGYRTARKPDLMKHMR 131
Score = 41.2 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H HTG+K Y CG+C +R+A L H++
Sbjct: 2167 MRTHTGEKPYKCDQCDYSASKKCNLDYHSAKHTGDKLYMCGECGYRTARKPDLMKHMR 2224
Score = 40.8 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGE+ Y C QC + +A L H K
Sbjct: 223 YMCGECGYMTARRSDLSRHMRTHTGERNYKCDQCDYSAAHKVSLVNHQAK 272
Score = 39.7 bits (91), Expect = 0.62, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
GC+ S +TG+KPY CG+C +R+A + L H++
Sbjct: 1294 GCLVSQPEANTGDKPYMCGECGYRAAYKSYLSRHMR 1329
Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
+RT + C CDY + + + +H HTG+KPY CG+C
Sbjct: 242 MRTHTGERNYKCDQCDYSAAHKVSLVNHQAKHTGDKPYMCGECG 285
>gi|260782549|ref|XP_002586348.1| hypothetical protein BRAFLDRAFT_108828 [Branchiostoma floridae]
gi|229271452|gb|EEN42359.1| hypothetical protein BRAFLDRAFT_108828 [Branchiostoma floridae]
Length = 254
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + HI HTG+KPY CG+C +R+A + L H+K
Sbjct: 75 MRTHTGEKPYKCDQCDYSAAQTSALNRHIAKHTGDKPYMCGECGYRTAEKSHLSEHMK 132
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+RTHTGEKPY C QC + +A + L+ H+ K
Sbjct: 56 YMCGECGYRATHKSDLSKHMRTHTGEKPYKCDQCDYSAAQTSALNRHIAK 105
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+C C Y + + + H+RTHTGEKPY C QC + +A + L HL
Sbjct: 1 MCGECGYRATHKSALSKHMRTHTGEKPYKCDQCDYSAAKKSNLDQHL 47
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KPY CG+C +R+ + L H++
Sbjct: 19 MRTHTGEKPYKCDQCDYSAAKKSNLDQHLAIHTGDKPYMCGECGYRATHKSDLSKHMR 76
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + N + H+ HT EKPY CG+C +R+A L H++
Sbjct: 151 MRTHTGGKPYKCDHCDYSAANKCHLDQHLTIHTVEKPYMCGECGYRTAHKPHLSEHMR 208
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+RTHTGE+PY C C + A + L H KK
Sbjct: 188 YMCGECGYRTAHKPHLSEHMRTHTGERPYKCDWCDYSEAQKSTLTKHCKK 237
>gi|158294369|ref|XP_315558.4| AGAP005555-PA [Anopheles gambiae str. PEST]
gi|157015532|gb|EAA11339.4| AGAP005555-PA [Anopheles gambiae str. PEST]
Length = 695
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C +C +T+ ELI H R + R HK C CDY S + ++ HIRTHTGE
Sbjct: 185 CKHCDNCFTTS-GELIRHIRYRHTHERP----HK--CTECDYASVELSKLKRHIRTHTGE 237
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
KP+ C C + S L H++
Sbjct: 238 KPFQCPHCTYASPDKFKLTRHMR 260
Score = 39.7 bits (91), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 27/59 (45%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
K IRT F C C Y S + + H+R HTGEKPY+C C R L H
Sbjct: 228 KRHIRTHTGEKPFQCPHCTYASPDKFKLTRHMRIHTGEKPYSCDVCFARFTQSNSLKAH 286
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Query: 150 CYACDYFSYNIGCMR---SHIRTHTGEKPYACGQCA--FRSASVAGLH 192
CY C+Y Y MR SH+ HT +KPY C QCA FR + H
Sbjct: 354 CYRCEYCPYASISMRHLESHLLLHTDQKPYKCDQCAQTFRQKQLLKRH 401
>gi|338723170|ref|XP_001497900.3| PREDICTED: transcriptional repressor CTCF isoform 2 [Equus
caballus]
Length = 399
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H ++ K+ R F C CDY M H RTHTGE
Sbjct: 141 CRYCDAVFHERY-ALIQHQKSHKNEKR-------FKCDQCDYACRQERHMIMHKRTHTGE 192
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KPYAC C FR + +H+ K YH
Sbjct: 193 KPYACSHCDKTFRQKQLLDMHF---KRYH 218
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C CDY S + ++ HIR+HTGE+P+ C C++ S
Sbjct: 5 TSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTY 64
Query: 190 GLHYHLK 196
L H++
Sbjct: 65 KLKRHMR 71
Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 39 KRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHI 98
>gi|260795993|ref|XP_002592989.1| hypothetical protein BRAFLDRAFT_275725 [Branchiostoma floridae]
gi|229278213|gb|EEN49000.1| hypothetical protein BRAFLDRAFT_275725 [Branchiostoma floridae]
Length = 476
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + G ++ H+ H+G+KPY CGQC +R+A L H++
Sbjct: 36 YKCSHCDYSAAQKGTLKRHLAKHSGDKPYMCGQCGYRTAQKRNLSEHMR 84
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + SHI THT +KPY CG+C +R+A + L H++
Sbjct: 224 MRTHTGEKPYKCDQCDYSAALKSTLDSHIATHTNDKPYMCGECGYRTAQKSTLSGHMR 281
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGEKPY C QC + +A + L HL
Sbjct: 64 YMCGQCGYRTAQKRNLSEHMRTHTGEKPYKCDQCDYSAARKSTLKQHL 111
Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CD+ + + H+ HTG+KPY CG+C +R+ A L H++
Sbjct: 177 YKCDQCDFSASQKSYLNKHLARHTGDKPYMCGECGYRTTQKAYLSQHMR 225
Score = 43.5 bits (101), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 122 STNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
+T ++ L +H T TDP + C CD+ + + H+ H G++PY CG+C
Sbjct: 365 TTEISALSQHMET-----HTDP--EPYKCDQCDFSAVKKYELDRHLEIHAGDRPYMCGEC 417
Query: 182 AFRSASVAGLHYHLK 196
FR+A + L H++
Sbjct: 418 GFRTADKSTLSGHMR 432
Score = 43.5 bits (101), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGEKPY C QC + +A + L H+
Sbjct: 205 YMCGECGYRTTQKAYLSQHMRTHTGEKPYKCDQCDYSAALKSTLDSHI 252
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIR-THTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + ++ H+ TH+ EKP+ CG+C +R+A + L H++
Sbjct: 83 MRTHTGEKPYKCDQCDYSAARKSTLKQHLAFTHSSEKPFMCGKCGYRAAEKSRLSQHMR 141
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT F C CDY + +H+ H GEKPY C QC F ++ + L+ HL +
Sbjct: 140 MRTHTGEKPFKCDFCDYSAARKCTFDTHLLKHKGEKPYKCDQCDFSASQKSYLNKHLAR 198
Score = 40.0 bits (92), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHT KPY C QC F SA+ L +HL
Sbjct: 261 YMCGECGYRTAQKSTLSGHMRTHT--KPYKCDQCDFSSANKKTLDHHL 306
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C+Y + +H+ HTGEKPY C C + +A L HL K
Sbjct: 8 YMCGECEYRTARKVHFSAHMAIHTGEKPYKCSHCDYSAAQKGTLKRHLAK 57
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + H+RTHTGEKP+ C C + +A HL K
Sbjct: 121 FMCGKCGYRAAEKSRLSQHMRTHTGEKPFKCDFCDYSAARKCTFDTHLLK 170
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ TH G++ Y CG+C + + ++ L H++
Sbjct: 328 YRCDQCDYSAVQKSLLDDHLSTHIGDELYTCGECGYSTTEISALSQHME 376
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C Y + I + H+ THT +PY C QC F + L HL+
Sbjct: 356 YTCGECGYSTTEISALSQHMETHTDPEPYKCDQCDFSAVKKYELDRHLE 404
>gi|260811482|ref|XP_002600451.1| hypothetical protein BRAFLDRAFT_70175 [Branchiostoma floridae]
gi|229285738|gb|EEN56463.1| hypothetical protein BRAFLDRAFT_70175 [Branchiostoma floridae]
Length = 631
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y S + + H++TH+GEKPY C QC + +A L YHL K
Sbjct: 209 FMCDKCGYRSAHKSALSQHMKTHSGEKPYKCDQCDYSAAEKYSLDYHLSK 258
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++T ++C C + + + + H+RTHTGEKPY C QC + +A A L YHL K
Sbjct: 460 MKTHTGEKPYMCGECGFRTAHKSSLAQHMRTHTGEKPYKCDQCDYSAAKKAVLDYHLAK 518
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTG+KPY C QC + +A+ L YHL K
Sbjct: 69 YMCGVCGYRATQKSSLTVHMRTHTGDKPYKCDQCDYSAATKTALDYHLAK 118
Score = 49.7 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT ++C C Y + + +HIRTHTGEKPY C QC + +A A HL K
Sbjct: 144 MRTHTGEKPYICDECGYRTTRKTTLANHIRTHTGEKPYKCDQCDYSAAQKAVFDCHLTK 202
Score = 49.3 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H++THTG+KPY CG+C +R+A + L H+K
Sbjct: 301 YMCGECGYRTAKKSYLSQHMKTHTGDKPYMCGECGYRTAQKSSLSQHMK 349
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+RTHTG KPY CG+C +R+A + L H+K
Sbjct: 523 YMCGDCGYRTVQKSGLIKHMRTHTGGKPYMCGECGYRTAQKSSLSQHMK 571
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+ THTGEKPY CG+C R+ S + L H+K
Sbjct: 385 YMCGECGYRTAKKSTLSEHMTTHTGEKPYMCGECGHRTVSKSNLSRHMK 433
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
RT ++C C Y + + H+RTHTGE+PY C QC + +A + L HL K
Sbjct: 5 RTHTGEKPYICDECGYRTARKSNLAQHMRTHTGERPYRCDQCDYSAAQKSNLDQHLTK 62
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H++THTG+KPY CG+C +R+A + L H+
Sbjct: 329 YMCGECGYRTAQKSSLSQHMKTHTGDKPYMCGECGYRTAKKSTLSEHM 376
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+ THTGEKPY CG+C +R+A + L H+
Sbjct: 357 YMCGECGYRTAKKSTLSEHMTTHTGEKPYMCGECGYRTAKKSTLSEHM 404
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY CG+C +R+A L H++
Sbjct: 88 MRTHTGDKPYKCDQCDYSAATKTALDYHLAKHTGEKPYMCGECGYRTARKTDLVQHMR 145
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 31/63 (49%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T + IRT + C CDY + H+ H GEKP+ C +C +RSA + L
Sbjct: 167 TLANHIRTHTGEKPYKCDQCDYSAAQKAVFDCHLTKHKGEKPFMCDKCGYRSAHKSALSQ 226
Query: 194 HLK 196
H+K
Sbjct: 227 HMK 229
Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY CG C +R+ + L H++
Sbjct: 32 MRTHTGERPYRCDQCDYSAAQKSNLDQHLTKHTGEKPYMCGVCGYRATQKSSLTVHMR 89
Score = 43.1 bits (100), Expect = 0.058, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+RTHTGEKPY C +C +R+ L H++
Sbjct: 125 YMCGECGYRTARKTDLVQHMRTHTGEKPYICDECGYRTTRKTTLANHIR 173
Score = 43.1 bits (100), Expect = 0.060, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 32/66 (48%)
Query: 131 HCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAG 190
H ++T + C CDY + + H+ HTG+KPY CG+C R+AS
Sbjct: 220 HKSALSQHMKTHSGEKPYKCDQCDYSAAEKYSLDYHLSKHTGDKPYMCGECGNRTASKPI 279
Query: 191 LHYHLK 196
+ H+K
Sbjct: 280 VSRHMK 285
Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT ++C C Y + + H++T T EKPY C +C +R+A L H++
Sbjct: 542 MRTHTGGKPYMCGECGYRTAQKSSLSQHMKTQTREKPYICDECGYRTARKPDLSIHMR 599
Score = 40.0 bits (92), Expect = 0.46, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
++T ++C C Y + + H+RTHTGEKPY C QC +
Sbjct: 570 MKTQTREKPYICDECGYRTARKPDLSIHMRTHTGEKPYKCNQCDY 614
>gi|432951248|ref|XP_004084769.1| PREDICTED: oocyte zinc finger protein XlCOF8.4-like [Oryzias
latipes]
Length = 469
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 62/140 (44%), Gaps = 32/140 (22%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRT--- 134
+C+ C SQ+S L+ ++M FS C C T +++L +H RT
Sbjct: 338 ICEKCFSQISSLN--------THMKTHTGEKPFS--CKECDKGF-TQISDLKKHMRTHTG 386
Query: 135 --------------CKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPY 176
C S +RT H F C C+ I +++H+RTHTGEKP+
Sbjct: 387 EKPFPCTECNKNFSCVSSLRTHMRTHTGEKPFSCKECNKSFTQISSLKTHMRTHTGEKPF 446
Query: 177 ACGQCAFRSASVAGLHYHLK 196
+C +C + V+ L HLK
Sbjct: 447 SCKECDASFSDVSNLKRHLK 466
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 147 KFVCYACDY-FSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++ C CD FS N +++HIRTHTGEKP+AC +C + V+ L H++
Sbjct: 277 RYTCKECDKSFSRNSH-LKAHIRTHTGEKPFACKECGRCFSVVSQLKRHMR 326
Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 19/112 (16%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
CK C N+ + KA + T+ E C+ C K +RT
Sbjct: 280 CKECDKSFSRNS---------HLKAHIRTHTGEKPFACKECGRCFSVVSQLKRHMRTHTG 330
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C+ I + +H++THTGEKP++C +C ++ L H++
Sbjct: 331 EKPFTCKICEKCFSQISSLNTHMKTHTGEKPFSCKECDKGFTQISDLKKHMR 382
>gi|260800077|ref|XP_002594963.1| hypothetical protein BRAFLDRAFT_130495 [Branchiostoma floridae]
gi|229280201|gb|EEN50974.1| hypothetical protein BRAFLDRAFT_130495 [Branchiostoma floridae]
Length = 884
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 29/47 (61%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
C CDY S G + H+ HTGEKPY C QC +RSA +GL H+K
Sbjct: 818 CDLCDYSSIWSGNLAKHMVKHTGEKPYMCDQCGYRSAYRSGLTSHMK 864
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
C CDY + M +H+ H+GEKPY C QC +RSA +GL H+K
Sbjct: 444 CELCDYRTTWKANMVTHMVKHSGEKPYMCDQCGYRSAYKSGLRSHMK 490
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY S + C H+ HTGE PY C +C + +AS +GL H K
Sbjct: 513 YNCSECDYSSTRLRCFDMHMAKHTGEMPYICVECGYETASKSGLSRHKK 561
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 143 PFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C CDY + G + H+ HTGEK Y C C FRS++ + L H K
Sbjct: 680 PYR----CNLCDYSANQKGHLDRHMTKHTGEKRYMCDVCGFRSSTKSNLSNHTK 729
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 22/37 (59%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
KF+C C Y + + SH TH+GEKPY C QC F
Sbjct: 261 KFMCEECGYKTTTSARLSSHKTTHSGEKPYKCDQCNF 297
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Query: 102 IRPNANNTFS----PFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFS 157
++ + N +S + Y KA L ++ +T + M P F C CD+ +
Sbjct: 337 MKTHGNKQYSCDQCDYAAYQKAHLDRHIKAKHTREKTYQYMCGRKPREKSFKCDQCDFCT 396
Query: 158 YNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+++H+ HTGEK + C C FR+A + H+++
Sbjct: 397 AYKHSLKNHMAQHTGEKRFMCEICGFRTADHSSFSNHMRE 436
Score = 39.7 bits (91), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 25/50 (50%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C Y S + H R HTGEKP+ C QC F +A L H+ K
Sbjct: 597 YTCEECGYKSATSSSLSRHRRIHTGEKPFKCNQCNFCTAWENYLDLHMAK 646
Score = 39.7 bits (91), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CD+ + +++H+ HTGEK Y C +C ++A + L +H+K
Sbjct: 760 FKCVECDFCTARKDSLKTHMAKHTGEKRYMCEKCGVQTAHHSQLTHHMK 808
Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R P++ C CD+ + + H HTGEKPY C +C ++SA+ + L H +
Sbjct: 565 REKPYK----CDQCDFRTAWKEYLSLHKSKHTGEKPYTCEECGYKSATSSSLSRHRR 617
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
F C C++ + + H+ H+GEKPY CG+C FR+A
Sbjct: 625 FKCNQCNFCTAWENYLDLHMAKHSGEKPYTCGECEFRTA 663
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H + H+ EKPY C QC FR+A L H K
Sbjct: 541 YICVECGYETASKSGLSRHKKIHSREKPYKCDQCDFRTAWKEYLSLHKSK 590
>gi|260832570|ref|XP_002611230.1| hypothetical protein BRAFLDRAFT_113980 [Branchiostoma floridae]
gi|229296601|gb|EEN67240.1| hypothetical protein BRAFLDRAFT_113980 [Branchiostoma floridae]
Length = 371
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 19/152 (12%)
Query: 45 FITAQLVLMSLDQILNLNLSVLLVTTIPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRP 104
F+ + + D+ NLS + T + + C C +H LD +M +
Sbjct: 94 FMCGECGYRTADRS---NLSRHIRTHTGEKPYK-CDQCDYSTTHRSTLD-----RHMAKH 144
Query: 105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMR 164
N + C C + + + L EH +RT + C CD+ + + G ++
Sbjct: 145 TGNKPY--MCDGC-GYRTASRSHLSEH-------MRTHTGERPYKCDQCDFSASHKGNLK 194
Query: 165 SHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
H+ HTGEKPY C +C +R+A + L H++
Sbjct: 195 KHMAKHTGEKPYLCDECGYRTADKSSLTEHMR 226
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 9/87 (10%)
Query: 112 PF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
PF C C+ ++N + L H RT M P++ C CDY + G + H+ H
Sbjct: 261 PFMCEQCE-YRTSNRSYLSAHMRTHTGMK---PYK----CAKCDYSASCKGNLVKHMYKH 312
Query: 171 TGEKPYACGQCAFRSASVAGLHYHLKK 197
TGEKPY CG+C FR+A + L H++K
Sbjct: 313 TGEKPYMCGECGFRTARTSCLTVHMRK 339
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + G + H HTGEKP+ CG+C +R+A + L H++K
Sbjct: 10 YKCDQCDYSAAHKGNLDKHKAKHTGEKPFMCGECGYRTADRSHLTAHMRK 59
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + + HIRTHTGEKPY C QC + + + L H+ K
Sbjct: 94 FMCGECGYRTADRSNLSRHIRTHTGEKPYKCDQCDYSTTHRSTLDRHMAK 143
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H THTGEKP+ CG+C +R+A + L H++
Sbjct: 66 YKCDQCDYSAAQKCNLDKHKATHTGEKPFMCGECGYRTADRSNLSRHIR 114
Score = 43.1 bits (100), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
F+C C Y + + + +H+R HTGEKPY C QC + +A L H
Sbjct: 38 FMCGECGYRTADRSHLTAHMRKHTGEKPYKCDQCDYSAAQKCNLDKH 84
Score = 42.7 bits (99), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + C+ H+R HTGEKPY C QC + +A L H+ K
Sbjct: 318 YMCGECGFRTARTSCLTVHMRKHTGEKPYKCDQCDYSAAQKFHLDRHVAK 367
Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 119 AVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAC 178
+ + + L EH +RT + C CDY + + + H+ HTGEKP+ C
Sbjct: 212 GYRTADKSSLTEH-------MRTHTGEKPYKCDQCDYSAAHKVSLDRHLTKHTGEKPFMC 264
Query: 179 GQCAFRSASVAGLHYHLK 196
QC +R+++ + L H++
Sbjct: 265 EQCEYRTSNRSYLSAHMR 282
>gi|449269340|gb|EMC80126.1| Zinc finger protein 711 [Columba livia]
Length = 807
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKT 198
+ + F H VC C + ++ H+RTHTGEKPY C CAFR A + L H+K
Sbjct: 544 VHSKNFPH--VCVECGKGFRHPSELKKHMRTHTGEKPYQCQHCAFRCADQSNLKTHIKTK 601
Query: 199 Y 199
+
Sbjct: 602 H 602
Score = 37.0 bits (84), Expect = 4.7, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 26/113 (23%)
Query: 83 HSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTD 142
HS+ + C+ C + T PF + +LS + +L C+ CK R
Sbjct: 683 HSETHKGKKIHQCRHCDF-------KTSDPF-VLSGHILSVHTKDLPFKCKRCKRGFRQQ 734
Query: 143 PFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++ H++TH+G K Y C C + + +G H+
Sbjct: 735 ------------------NELKKHMKTHSGRKVYQCQYCEYSTTDASGFKRHV 769
>gi|260795601|ref|XP_002592793.1| hypothetical protein BRAFLDRAFT_65374 [Branchiostoma floridae]
gi|229278017|gb|EEN48804.1| hypothetical protein BRAFLDRAFT_65374 [Branchiostoma floridae]
Length = 502
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C ++ +++HIRTHTGEKPY CG+C+ R + + L H+
Sbjct: 393 KRHVRTHTGEKPYRCEECSRQFRHLRNLKAHIRTHTGEKPYGCGECSRRFSELGALKRHI 452
Query: 196 K 196
+
Sbjct: 453 R 453
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 131 HCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAG 190
H R K+ IRT + C C +G ++ HIRTHTGEKPY C +C+ + + +
Sbjct: 416 HLRNLKAHIRTHTGEKPYGCGECSRRFSELGALKRHIRTHTGEKPYKCEECSRQFSVLWN 475
Query: 191 LHYHLK 196
L H++
Sbjct: 476 LKTHIR 481
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 37/60 (61%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
S +R+ ++ C C+ + +++H+RTHTG+KPY CG+C+ + + ++ L H++
Sbjct: 19 SSVRSAREEKRYKCEECNKQFSQLCNLKAHMRTHTGDKPYQCGECSTQFSQLSNLKSHMR 78
Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 8/81 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C C S L EL +H RT I P++ C C + +++H+RTHTGE
Sbjct: 295 CEECSRQFS-QLGELKKHMRT---HIGEKPYK----CEECSRRFSVLSHLKTHMRTHTGE 346
Query: 174 KPYACGQCAFRSASVAGLHYH 194
KPY C +C+ + + GL H
Sbjct: 347 KPYKCEECSKQFSRQDGLKSH 367
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C + ++ H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 225 KAHMRTHTGEKPYKCEECSRQFSQLSDLKRHMRTHTGEKPYKCEECSKQFSQLCNLKVHM 284
Query: 196 K 196
+
Sbjct: 285 R 285
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 10/89 (11%)
Query: 118 KAVLSTNLNELIEHCRTCKSM----------IRTDPFRHKFVCYACDYFSYNIGCMRSHI 167
K+ + T+ E C C+ +RT + C C ++ H+
Sbjct: 74 KSHMRTHTEEKPYKCEECRKQFSLFHHLEIHMRTHTGEKPYKCEECRKQFRQFHHLKGHM 133
Query: 168 RTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RTHTGEKP+ C +C+ + + L H++
Sbjct: 134 RTHTGEKPFTCEECSRQFSEFGNLKRHMR 162
>gi|432848799|ref|XP_004066457.1| PREDICTED: oocyte zinc finger protein XlCOF6-like [Oryzias latipes]
Length = 208
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 17/116 (14%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C H+ L +M+ FS C C S H + K+
Sbjct: 68 CRECDKSFRHISALR-----RHMVTHTGEKPFS--CKECDKSFS--------HVSSLKTH 112
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLH 192
+RT F C CD +I +++H+RTHTGEKP++C +C +FR AS H
Sbjct: 113 MRTHTGEKPFSCRECDKSFRHISALKTHMRTHTGEKPFSCNECDQSFRDASNLKKH 168
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
CK C SH+ L ++M FS C C ++ H K+
Sbjct: 96 CKECDKSFSHVSSLK-----THMRTHTGEKPFS--CREC--------DKSFRHISALKTH 140
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CD + ++ H+RTHTGEKP++C +C + ++ L H++
Sbjct: 141 MRTHTGEKPFSCNECDQSFRDASNLKKHMRTHTGEKPFSCKECDKSYSQMSRLKTHMR 198
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CD ++ +++H+RTHTGEKP++C +C ++ L H++
Sbjct: 94 FSCKECDKSFSHVSSLKTHMRTHTGEKPFSCRECDKSFRHISALKTHMR 142
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F C CD I ++SH+R HTGEKP++C +C ++ L H+
Sbjct: 38 FSCKECDRGFCRISDLQSHMRIHTGEKPFSCRECDKSFRHISALRRHM 85
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CD ++ +++H+R HTGEK ++C +C ++ L H++
Sbjct: 10 FSCKECDKSFSHVSSLKTHMRIHTGEKTFSCKECDRGFCRISDLQSHMR 58
>gi|157169519|ref|XP_001657879.1| zinc finger protein [Aedes aegypti]
gi|108883659|gb|EAT47884.1| AAEL001016-PA [Aedes aegypti]
Length = 437
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 31/59 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+R+ F C CD Y+ G + H R HTGEKPY C C + A +GL HLKK
Sbjct: 378 LRSHSNERPFRCTDCDKGFYSSGKLTIHRRVHTGEKPYKCSSCPAKFADSSGLKRHLKK 436
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 18/134 (13%)
Query: 68 VTTIPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLN 126
+ T+PT ++ +C+ C + + LD H ++M P PF C +C+ +
Sbjct: 237 LATLPTVHNLMCEFCFQEFNVLDE-KHEHESAHMTEPK------PFKCPHCQRTFKDKVG 289
Query: 127 ELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
+S IR ++ C C+ + G + +H RTH G KPY C C A
Sbjct: 290 --------LRSHIRIHSAVKRYKCQHCEMRFHIRGNLTAHERTHIGAKPYLCPHCGKGFA 341
Query: 187 SVAGLHYHLKKTYH 200
L H++ YH
Sbjct: 342 ERGNLKSHIR--YH 353
>gi|260823008|ref|XP_002603975.1| hypothetical protein BRAFLDRAFT_71737 [Branchiostoma floridae]
gi|229289300|gb|EEN59986.1| hypothetical protein BRAFLDRAFT_71737 [Branchiostoma floridae]
Length = 1925
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 122 STNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
S+ N+L H +RT + C CDY + + + +H R HTGEKPY CG+C
Sbjct: 744 SSRKNDLSRH-------MRTHTGEKPYKCDQCDYSAADRTTLANHQRKHTGEKPYMCGEC 796
Query: 182 AFRSASVAGLHYHLKK 197
FR+ L H++K
Sbjct: 797 GFRTNRKFILSVHMRK 812
Score = 49.3 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 49/118 (41%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C HC + LDH +P C C +T + L H RT
Sbjct: 1248 CDHCDYSAADKSALDHHIVIHTGEKPY-------MCGEC-GFRTTQKSHLSRHMRTHTG- 1298
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C CDY + + + H R HTGEKPY C +C +R+A + L H+K
Sbjct: 1299 --EKPYR----CDQCDYSAADKYTLDQHQRKHTGEKPYICDECGYRAAGRSTLSRHMK 1350
Score = 49.3 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+R+ + C CDY + + + HI HTGEKPY CG+C FR+ + L H++
Sbjct: 1237 MRSHTGEKPYRCDHCDYSAADKSALDHHIVIHTGEKPYMCGECGFRTTQKSHLSRHMR 1294
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Query: 143 PFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C CDY++ + H+RTH GEKP+ CG+C +R++ + L H++
Sbjct: 1757 PYR----CDQCDYYATQKYRLVDHLRTHNGEKPFMCGECGYRASQKSHLSKHMR 1806
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKPY CG+C +R+A + L H++
Sbjct: 819 YKCDQCDYSAAQKSNLEQHLSKHTGEKPYMCGECGYRTAYRSDLSKHMR 867
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK-----KTYH 200
C CDY + + H++ H+GEKPY CG C +R+A + L H++ K YH
Sbjct: 114 CDQCDYSAARKSSLDKHLQMHSGEKPYMCGDCGYRTAQKSDLSRHMRTHTGEKPYH 169
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H HTGEKP+ CG+C +R+A + L H++
Sbjct: 1181 MRTHSGEKPYKCDQCDYSAARRSALEEHKAKHTGEKPFMCGECGYRAARKSHLSQHMR 1238
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + H+ HTGEKPY CG+C FR+A L H++
Sbjct: 651 YKCDQCDYSAARKSTFDKHLVKHTGEKPYMCGECGFRTAHQCYLSRHMR 699
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+R H+GEKPY CG+C +R+ L H++
Sbjct: 159 MRTHTGEKPYHCDQCDYSAAQKPHLDRHLRKHSGEKPYMCGECGYRTTQKYDLSRHMR 216
Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A L HL+K
Sbjct: 140 YMCGDCGYRTAQKSDLSRHMRTHTGEKPYHCDQCDYSAAQKPHLDRHLRK 189
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 30/59 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT F+C C Y + + H+RTHTGEKPY C QC F + L H +K
Sbjct: 1777 LRTHNGEKPFMCGECGYRASQKSHLSKHMRTHTGEKPYKCDQCDFSAIDKFKLKQHQEK 1835
Score = 47.0 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + HIR HTG+KPY CG+C +R L H++
Sbjct: 1674 YKCDQCDYSATEKSTLVKHIRKHTGDKPYICGECGYRVTRKNDLSRHMR 1722
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 121 LSTNLNELIEHCRTCKSMIRTDPF--RH--------KFVCYACDYFSYNIGCMRSHIRTH 170
+ T+ E HC C P RH ++C C Y + + H+RTH
Sbjct: 159 MRTHTGEKPYHCDQCDYSAAQKPHLDRHLRKHSGEKPYMCGECGYRTTQKYDLSRHMRTH 218
Query: 171 TGEKPYACGQCAFRSASVAGLHYHLKK 197
TGEKPY C QC++ +A L HL K
Sbjct: 219 TGEKPYKCDQCSYSAAQKYYLDKHLVK 245
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y S + H+R HTGE+PY C QC + +A + L+ HL K
Sbjct: 1533 YMCGECGYRSVQKSDLTKHMRIHTGERPYKCDQCDYSAAQKSRLNKHLTK 1582
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 122 STNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
+ + + L H RT T RHK C CDY + + H R H+GE+PY CG+C
Sbjct: 353 TADRSALSRHMRT-----HTGERRHK--CDQCDYSAALKHYLIDHQRRHSGERPYMCGEC 405
Query: 182 AFRSASVAGLHYHLK 196
+R+A + L H++
Sbjct: 406 GYRAAKKSTLSQHMR 420
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKPY CG+C R+ A L H++
Sbjct: 1561 YKCDQCDYSAAQKSRLNKHLTKHTGEKPYMCGECGVRTPYKASLSRHMR 1609
Score = 45.8 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 29/59 (49%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
IR ++C C Y + H+RTHTGEKPY C QC + +A L HL K
Sbjct: 1693 IRKHTGDKPYICGECGYRVTRKNDLSRHMRTHTGEKPYKCDQCDYSAARKINLVQHLTK 1751
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC++ +A L HL K
Sbjct: 252 YMCGECGYRTTQKYDLSRHMRTHTGEKPYKCDQCSYSAAQKYYLDKHLVK 301
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 111 SPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
SP C+ + + ++L +H +R ++C C Y + + H RTH
Sbjct: 565 SPTCVGSVTIRAAQKSDLSKH-------MRIHTGEKPYMCGECGYRTAKKSHLSRHTRTH 617
Query: 171 TGEKPYACGQCAFRSASVAGLHYHLKK 197
TGEKP C QC + +A + L H+ K
Sbjct: 618 TGEKPCKCDQCDYSAAHKSSLEQHVAK 644
Score = 45.1 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H H+GEKPY CG+C +R+A A L+ H++
Sbjct: 1870 YKCDQCDYSAAEKHHLIDHQTRHSGEKPYMCGECGYRAAQRATLYRHME 1918
Score = 44.7 bits (104), Expect = 0.023, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H+R HTGEKPY C QC + +A + L HL K
Sbjct: 791 YMCGECGFRTNRKFILSVHMRKHTGEKPYKCDQCDYSAAQKSNLEQHLSK 840
Score = 44.3 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 36/84 (42%), Gaps = 11/84 (13%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C Y A ST L++H M FR CY + H+RTHTGE
Sbjct: 656 CDYSAARKSTFDKHLVKHTGEKPYMCGECGFRTAHQCY-----------LSRHMRTHTGE 704
Query: 174 KPYACGQCAFRSASVAGLHYHLKK 197
+PY C QC + +A L HL K
Sbjct: 705 RPYKCDQCNYSAAHKCDLDKHLVK 728
Score = 44.3 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + + H+RTHTGEKPY C C F ++ + L H+
Sbjct: 1105 YICAECGYRATHKCTLAYHMRTHTGEKPYNCDHCDFSTSHKSNLDRHI 1152
Score = 44.3 bits (103), Expect = 0.028, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 128 LIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSH-IRTHTGEKPYACGQCAFRSA 186
L++H M P++ C CDY G + H HTGEKPY CG+C +R+A
Sbjct: 299 LVKHSGEKPYMCGEKPYK----CDQCDYSGVWKGNLDKHKAAKHTGEKPYMCGECGYRTA 354
Query: 187 SVAGLHYHLK 196
+ L H++
Sbjct: 355 DRSALSRHMR 364
Score = 43.9 bits (102), Expect = 0.033, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
F+C C Y + + + H+R HTGE+PY C QC F +A + H
Sbjct: 1047 FMCGECGYRTVQMSDLTKHMRIHTGERPYKCDQCDFSAAQKLHMDRH 1093
Score = 43.9 bits (102), Expect = 0.034, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H+RTHTGEKPY C QC + +A L H +K
Sbjct: 1274 YMCGECGFRTTQKSHLSRHMRTHTGEKPYRCDQCDYSAADKYTLDQHQRK 1323
Score = 43.9 bits (102), Expect = 0.041, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTH+GEKPY C QC + +A + L H K
Sbjct: 1162 YMCGECGYRTAYRSDLSRHMRTHSGEKPYKCDQCDYSAARRSALEEHKAK 1211
Score = 43.5 bits (101), Expect = 0.049, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKT 198
+RT + C CD+ + + ++ H H G+KPY CG+CA+ +A + L H++
Sbjct: 1805 MRTHTGEKPYKCDQCDFSAIDKFKLKQHQEKHAGDKPYKCGECAYMTAYRSHLSRHMR-- 1862
Query: 199 YH 200
YH
Sbjct: 1863 YH 1864
Score = 43.1 bits (100), Expect = 0.055, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G M H+ HTGEKPY CG+C +RS + L H++
Sbjct: 1518 GNMERHVVKHTGEKPYMCGECGYRSVQKSDLTKHMR 1553
Score = 43.1 bits (100), Expect = 0.057, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CDY + + + H+ H+GEKPY C QC + +A + HL K
Sbjct: 625 CDQCDYSAAHKSSLEQHVAKHSGEKPYKCDQCDYSAARKSTFDKHLVK 672
Score = 43.1 bits (100), Expect = 0.057, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+RTHTGEKP C QC + +A + L HL+
Sbjct: 84 YMCGVCGYRTERKSNLSLHMRTHTGEKPNKCDQCDYSAARKSSLDKHLQ 132
Score = 42.7 bits (99), Expect = 0.073, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H R HTGEKPY C QC + + + L H++K
Sbjct: 1646 YMCGECGYRTVERSTLSRHRRIHTGEKPYKCDQCDYSATEKSTLVKHIRK 1695
Score = 42.4 bits (98), Expect = 0.098, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSH-IRTHTGEKPYACGQCAFRSASVAGLHYH 194
+RT + C CDY + + +H I H+GEKPY CG+C +R+ + L H
Sbjct: 1608 MRTHTGEKPYKCDQCDYSAARKSTLDNHTIAKHSGEKPYMCGECGYRTVERSTLSRH 1664
Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C Y + + H+ H+GEKPY CG+C +R+ L H++
Sbjct: 215 MRTHTGEKPYKCDQCSYSAAQKYYLDKHLVKHSGEKPYMCGECGYRTTQKYDLSRHMR 272
Score = 41.6 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
++C C Y + + H++THTGE+PY C QC + +A
Sbjct: 1330 YICDECGYRAAGRSTLSRHMKTHTGERPYLCDQCDYSTA 1368
Score = 41.2 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C + + H+RTHTGEKPY C QC + +A + L H
Sbjct: 1589 YMCGECGVRTPYKASLSRHMRTHTGEKPYKCDQCDYSAARKSTLDNH 1635
Score = 39.7 bits (91), Expect = 0.66, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G M S + HTGEKP+ CG+C +R+ ++ L H++
Sbjct: 1032 GDMGSRVVKHTGEKPFMCGECGYRTVQMSDLTKHMR 1067
Score = 39.3 bits (90), Expect = 0.93, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
+ C C Y + + H+R HTGEKPY C QC + +A
Sbjct: 1842 YKCGECAYMTAYRSHLSRHMRYHTGEKPYKCDQCDYSAA 1880
Score = 38.9 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G M H+ HTG+KPY CG C +R+ + L H++
Sbjct: 69 GNMGRHVVKHTGDKPYMCGVCGYRTERKSNLSLHMR 104
Score = 37.7 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
++C C Y + + + H+RTHTGE+ + C QC + +A
Sbjct: 344 YMCGECGYRTADRSALSRHMRTHTGERRHKCDQCDYSAA 382
Score = 37.4 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGE--KPYACGQCAFRSASVAGLHYHLK 196
+ C CD+ + M H HTG+ KPY C +C +R+ L YH++
Sbjct: 1075 YKCDQCDFSAAQKLHMDRHTAMHTGDNDKPYICAECGYRATHKCTLAYHMR 1125
>gi|260794583|ref|XP_002592288.1| hypothetical protein BRAFLDRAFT_71028 [Branchiostoma floridae]
gi|229277504|gb|EEN48299.1| hypothetical protein BRAFLDRAFT_71028 [Branchiostoma floridae]
Length = 1033
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 77/213 (36%), Gaps = 43/213 (20%)
Query: 25 RTNITSDVYIAVLVFSNLTFFITAQLVLMSLDQILNLNLSVLLVTTIPTQNHSLCKHCHS 84
RT+ Y ++N T Q+ Q LN + T + C+ C
Sbjct: 456 RTHTGEKPY--KYTYANSLRGETLQVCEECSKQFRKLNHLKTQMRTHTGEKPYRCEECGK 513
Query: 85 QLSHLDLLD------------HCKTCSYMI-RPNA-------NNTFSPF-CIYCKAVLS- 122
Q S LD L C+ CS RP + + P+ C C S
Sbjct: 514 QFSRLDNLKTHKQTHTGEKPYRCEKCSKQFSRPGSLRSHMRIHTGEKPYRCEECSKQFSQ 573
Query: 123 ---------TNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCM 163
T+ E C C KS +RT + C C +G +
Sbjct: 574 LYALKIHERTHTGEKPYRCEECSMKFSTRSHLKSHMRTHTGEKPYKCEECSSHFSELGNL 633
Query: 164 RSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++H+RTHTGEKPY C +C+ + + + L H++
Sbjct: 634 KTHMRTHTGEKPYRCEECSRQFSELGNLKKHMR 666
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 50/119 (42%), Gaps = 17/119 (14%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKS 137
C+ C Q S L CS + P+ C C S L EL KS
Sbjct: 180 CEECSRQFSEL--------CSLKTHMRTHTGEKPYKCEECSKQFS-QLGEL-------KS 223
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C +G ++ H+RTHTGEKPY C +C+ + V L H++
Sbjct: 224 HMRTHTGEKPYGCEECSRQFSRLGHLKRHMRTHTGEKPYNCEKCSREFSEVGSLKKHMR 282
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C +G +++H+RTHTGEKPY C +C+ + + +A L H+
Sbjct: 858 KKHMRTHTGEKPYSCEECSRQFSELGALKTHMRTHTGEKPYRCEECSRQFSELAHLTKHM 917
Query: 196 K 196
+
Sbjct: 918 R 918
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 17/97 (17%)
Query: 95 CKTCSYMI-RPNA-------NNTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFR 145
C+ CS RP++ + P+ C C S +L++L +H RT P+R
Sbjct: 12 CEECSKQFSRPDSLKKHMRIHTGEKPYRCEECSKQFS-HLSDLKKHMRT---HTGEKPYR 67
Query: 146 HKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
C C +G +++H+RTHTGEKPY C QC
Sbjct: 68 ----CEECSRQFSQLGDLKTHMRTHTGEKPYRCEQCG 100
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+S +RT + C C +G ++ H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 138 ESHMRTHTGEKPYKCEECSRQFSQLGELKKHMRTHTGEKPYRCEECSRQFSELCSLKTHM 197
Query: 196 K 196
+
Sbjct: 198 R 198
Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT C C + G +++H+RTHTGEKPY C +C+ R + ++ L H+
Sbjct: 718 KTHMRTHTGEKPHRCEECSKQFSSHGNLKTHMRTHTGEKPYKCEECSRRFSQMSRLKVHM 777
Query: 196 K 196
+
Sbjct: 778 R 778
Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C +G +++H+RTHTGEKPY C +C+ + + L H
Sbjct: 970 KKHMRTHTGEKPYSCEECSRQFSELGALKTHMRTHTGEKPYRCEECSKQFRHLNALKKHK 1029
Query: 196 K 196
K
Sbjct: 1030 K 1030
Score = 42.7 bits (99), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 47/117 (40%), Gaps = 15/117 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C Q S L L S+M + C C S L L H
Sbjct: 208 CEECSKQFSQLGELK-----SHMRTHTGEKPYG--CEECSRQFS-RLGHLKRH------- 252
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + C C +G ++ H+R HTGEKPY C +C+ + + + L H+
Sbjct: 253 MRTHTGEKPYNCEKCSREFSEVGSLKKHMRIHTGEKPYRCEECSRQFSRLGHLKRHI 309
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHK--FVCYACDYFSYNIGCMRSHIRTHT 171
C C S L+ L EH RT P++ + + C C +G +++H+++HT
Sbjct: 320 CEECSRQFS-RLDHLKEHMRT---HTGEKPYKWEKPYSCEECSKQFSQLGHLKTHVQSHT 375
Query: 172 GEKPYACGQCAFRSASVAGLHYHLK 196
GEKPY C +C + ++ + L H++
Sbjct: 376 GEKPYRCEECNKQFSARSNLKKHMR 400
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C + + H+R HTGEKPY C +C+ + + L H+
Sbjct: 886 KTHMRTHTGEKPYRCEECSRQFSELAHLTKHMRIHTGEKPYKCEECSRQFSEAGSLKTHM 945
Query: 196 K 196
+
Sbjct: 946 R 946
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C + +++H+RTHTGEKPY C C + + ++ L H+
Sbjct: 396 KKHMRTHTGEKPYKCEECSKQFTQLVDLKNHVRTHTGEKPYRCENCRSQFSVLSNLKRHM 455
Query: 196 K 196
+
Sbjct: 456 R 456
Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 10/89 (11%)
Query: 118 KAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHI 167
K + T+ E C C K+ +RT + C C + ++ H+
Sbjct: 718 KTHMRTHTGEKPHRCEECSKQFSSHGNLKTHMRTHTGEKPYKCEECSRRFSQMSRLKVHM 777
Query: 168 RTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R H GEKPY C +C+ + + +A L H++
Sbjct: 778 RIHGGEKPYRCEECSRQFSELAHLTKHMR 806
Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C ++ H+R HTGEKPY C +C+ + + ++ L H++
Sbjct: 1 MRTHTGEKPYKCEECSKQFSRPDSLKKHMRIHTGEKPYRCEECSKQFSHLSDLKKHMR 58
>gi|260815967|ref|XP_002602744.1| hypothetical protein BRAFLDRAFT_233806 [Branchiostoma floridae]
gi|229288055|gb|EEN58756.1| hypothetical protein BRAFLDRAFT_233806 [Branchiostoma floridae]
Length = 262
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + HI HTG+KPY CG+C +R+A + L H+K
Sbjct: 132 MRTHTGEKPYKCDQCDYSAAQTSTLNRHIAKHTGDKPYMCGECGYRTAEKSHLSEHMK 189
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+RTHTGEKPY C QC + +A + L+ H+ K
Sbjct: 113 YMCGECGYRATHKSALSKHMRTHTGEKPYKCDQCDYSAAQTSTLNRHIAK 162
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A + L+ HL K
Sbjct: 1 YICGKCGYRATYKCVLSKHMRTHTGEKPYKCDQCDYSAAHKSNLNRHLAK 50
Score = 42.7 bits (99), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTG+KPY CG+C +R+ + L H++
Sbjct: 85 YKCDQCDYSAAKKFNLNQHLAIHTGDKPYMCGECGYRATHKSALSKHMR 133
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + H+ HT KPY CG+C FR+ L H++
Sbjct: 20 MRTHTGEKPYKCDQCDYSAAHKSNLNRHLAKHTDAKPYMCGECGFRTTQKCHLSEHMR 77
Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C + + + H+R HTGEKPY C QC + +A L+ HL
Sbjct: 57 YMCGECGFRTTQKCHLSEHMRNHTGEKPYKCDQCDYSAAKKFNLNQHL 104
Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
++C C Y + + H++THTGE+PY C QC
Sbjct: 169 YMCGECGYRTAEKSHLSEHMKTHTGERPYTCDQC 202
>gi|109091564|ref|XP_001089797.1| PREDICTED: transcriptional repressor CTCFL [Macaca mulatta]
gi|355563006|gb|EHH19568.1| hypothetical protein EGK_02262 [Macaca mulatta]
Length = 667
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H +T K+ +F C C Y M +HIRTHTGE
Sbjct: 464 CRYCSAVFHERY-ALIQHQKTHKN-------EKRFKCEHCSYACKQERHMTAHIRTHTGE 515
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KP+ C C FR + +H+ + YH
Sbjct: 516 KPFTCLSCNKCFRQKQLLNVHF---RKYH 541
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 328 TSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 387
Query: 190 GLHYHLK 196
L H++
Sbjct: 388 KLKRHMR 394
Score = 43.9 bits (102), Expect = 0.037, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +R+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 362 KRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEKPYECHICHTRFTQSGTMKIHI 421
Score = 39.3 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 129 IEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSA 186
+E ++ K+ +T + F C C + S + H++THT EKP+ C C FR+
Sbjct: 242 VEKAKSTKNQRKTKGAKRTFHCDVCMFTSSRMSSFNRHMKTHTNEKPHLCHLCLKTFRTV 301
Query: 187 SVAGLH 192
++ H
Sbjct: 302 TLLRNH 307
>gi|326916999|ref|XP_003204792.1| PREDICTED: zinc finger protein 40-like [Meleagris gallopavo]
Length = 2721
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 115 IYCKAVLSTNLNELIEHCRTCKSMIRTDPFR-HKFVCYACDYFSYNIGCMRSHIRTHTGE 173
+Y A +++ +N +E + C + P + K+VC C+ ++ HIR+HTGE
Sbjct: 386 VYNSAQIASVVNHGVE--QICNLLKDQKPKKLGKYVCEYCNRACAKPSVLQKHIRSHTGE 443
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTYH 200
+PY C C F + + L+ H K H
Sbjct: 444 RPYPCVTCGFSFKTKSNLYKHKKSHAH 470
Score = 45.1 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 2081 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCNYCNFSFKTKGNLTKHMKSKAH 2136
>gi|260823000|ref|XP_002603971.1| hypothetical protein BRAFLDRAFT_71741 [Branchiostoma floridae]
gi|229289296|gb|EEN59982.1| hypothetical protein BRAFLDRAFT_71741 [Branchiostoma floridae]
Length = 644
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ THTG+KPY CG+C +R+A + H++
Sbjct: 488 VRTHTGEKPYKCDQCDYSATQKSNLDRHLVTHTGDKPYMCGECGYRTAQKSDFSKHMR 545
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 30/57 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + C CDY + + H+RTHTGEKPY C QC + + + L HL
Sbjct: 460 MRTHTGEKPYKCDQCDYSAAEKSKLSDHVRTHTGEKPYKCDQCDYSATQKSNLDRHL 516
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + H+RTHTGEKPY C QC + +A + L HL K
Sbjct: 525 YMCGECGYRTAQKSDFSKHMRTHTGEKPYKCDQCDYSAARKSHLDNHLAK 574
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + +H+ H+G+KPY CG+C +R+A L H++
Sbjct: 544 MRTHTGEKPYKCDQCDYSAARKSHLDNHLAKHSGDKPYMCGECGYRTARKHHLSRHMR 601
Score = 47.0 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+RTHTGEKPY C QC + +A + L H++
Sbjct: 441 YMCGECGYRTVYRSSLSRHMRTHTGEKPYKCDQCDYSAAEKSKLSDHVR 489
Score = 42.4 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 37/140 (26%), Positives = 56/140 (40%), Gaps = 28/140 (20%)
Query: 79 CKHCHSQLSHLD--LLDH-------CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELI 129
C + +Q S+LD L+ H C C Y R + FS + T+ E
Sbjct: 502 CDYSATQKSNLDRHLVTHTGDKPYMCGECGY--RTAQKSDFSKH-------MRTHTGEKP 552
Query: 130 EHCRTC------KSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACG 179
C C KS + +H ++C C Y + + H+RTH GE PY C
Sbjct: 553 YKCDQCDYSAARKSHLDNHLAKHSGDKPYMCGECGYRTARKHHLSRHMRTHRGENPYKCD 612
Query: 180 QCAFRSASVAGLHYHLKKTY 199
QC + + + L HL + +
Sbjct: 613 QCNYSATKKSHLTLHLTRRH 632
Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEK-PYACGQCAFRSASVAGLHYHLK 196
++C+ C Y M HI HT EK Y CGQC F +A AGL H++
Sbjct: 329 YICWKCGYRDACKDNMDKHISKHTVEKLHYMCGQCEFTTADKAGLSQHME 378
Score = 38.5 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 7/47 (14%)
Query: 148 FVCYACDYFS---YNIGCMRS---HIRTHTGEKPYACGQCAFRSASV 188
++C C Y S Y++ CM H+RTHTGEKP+ C QC + + V
Sbjct: 160 YMCDECGYSSTKMYDL-CMTKLTVHMRTHTGEKPFKCDQCDYSANMV 205
Score = 38.1 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Query: 143 PFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
P+R C CDY + + H+ H+G++PY C C + +A YH+
Sbjct: 383 PYR----CDQCDYSAVREAELSIHLAKHSGKRPYKCDHCDYAAAQKPHFDYHM 431
Score = 36.6 bits (83), Expect = 6.3, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
+ + C CDY + H+ H+GEK Y CG+C +R+ + L H++
Sbjct: 409 KRPYKCDHCDYAAAQKPHFDYHMAAKHSGEKSYMCGECGYRTVYRSSLSRHMR 461
Score = 36.6 bits (83), Expect = 6.4, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 153 CDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGL 191
CDY + + + HI T HTGEKPY C +C + S + L
Sbjct: 136 CDYAAAHQANLAYHIATKHTGEKPYMCDECGYSSTKMYDL 175
Score = 35.8 bits (81), Expect = 9.2, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C++ + + + H+ TH KPY C QC + + A L HL K
Sbjct: 358 YMCGQCEFTTADKAGLSQHMETHV--KPYRCDQCDYSAVREAELSIHLAK 405
>gi|449662406|ref|XP_002163561.2| PREDICTED: uncharacterized protein LOC100201104 [Hydra
magnipapillata]
Length = 1129
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 58/152 (38%), Gaps = 36/152 (23%)
Query: 71 IPTQNH---SLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNE 127
IP Q + C HC + D+ +H TC C C +LS NL
Sbjct: 229 IPDQQSPDLATCTHCKGKFRKEDVHEHMLTCPERYVQ---------CRECGKILS-NLQT 278
Query: 128 LIEH------------CRTCKSM----------IRTDPFRHK-FVCYACDYFSYNIGCMR 164
L H C C M ++T F+ K F C CD +
Sbjct: 279 LERHHKRFHLKIREVPCTLCDKMFIDEAAARKHLKTVHFKVKNFHCPHCDKSFSQRNKLT 338
Query: 165 SHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
H+RTH+GEKPY+C +C + + L HL+
Sbjct: 339 YHVRTHSGEKPYSCAECGRSFSLLWNLKTHLR 370
Score = 43.5 bits (101), Expect = 0.054, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 8/82 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C +C S N+L H +RT + C C + +++H+RTHTGE
Sbjct: 324 CPHCDKSFSQR-NKLTYH-------VRTHSGEKPYSCAECGRSFSLLWNLKTHLRTHTGE 375
Query: 174 KPYACGQCAFRSASVAGLHYHL 195
KPY C C R + HL
Sbjct: 376 KPYICETCGRRFTQKQNMTSHL 397
>gi|449493707|ref|XP_002187597.2| PREDICTED: zinc finger protein 40 [Taeniopygia guttata]
Length = 2676
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 115 IYCKAVLSTNLNELIEHCRTCKSMIRTDPFR-HKFVCYACDYFSYNIGCMRSHIRTHTGE 173
+Y A +++ +N +E + C + P + K+VC C+ ++ HIR+HTGE
Sbjct: 345 VYNSAQIASVVNHGVE--QICNLLKDQKPKKLGKYVCEYCNRACAKPSVLQKHIRSHTGE 402
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTYH 200
+PY C C F + + L+ H K H
Sbjct: 403 RPYPCVTCGFSFKTKSNLYKHKKSHAH 429
Score = 45.1 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 2043 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCNYCNFSFKTKGNLTKHMKSKAH 2098
>gi|260823042|ref|XP_002603992.1| hypothetical protein BRAFLDRAFT_119787 [Branchiostoma floridae]
gi|229289317|gb|EEN60003.1| hypothetical protein BRAFLDRAFT_119787 [Branchiostoma floridae]
Length = 588
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 17/100 (17%)
Query: 114 CIYCKAVLSTNLNELIEH-------CRTCK----------SMIRTDPFRHKFVCYACDYF 156
C Y AV ST L +H CR C+ +R + C CDY
Sbjct: 364 CDYSAAVQSTLDKHLAKHTGEKPYMCRECEYRTAHQSHLSRHMRVHTGERPYKCDLCDYS 423
Query: 157 SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ G + H+ HTG+KPY CG+C R+A ++ L H++
Sbjct: 424 AAQKGHLVQHLTKHTGDKPYMCGECGHRTAQMSDLSKHMR 463
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H H+GEKPY CG+C +R+A + L H+K
Sbjct: 520 MRTHTGEKPYKCDQCDYSAAEKHHLIDHQTRHSGEKPYKCGECGYRAAQRSTLSRHMK 577
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + G + HI HTG+KPY C C +R+A L H++
Sbjct: 199 MRTHTGEKPYKCDKCDYSAAQKGELNKHIAKHTGDKPYMCEVCGYRTAQRCNLSRHMR 256
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + H++THTGEKPY C QC + +A + L HL K
Sbjct: 331 FMCGECWYRTTQKSHLSRHMKTHTGEKPYKCDQCDYSAAVQSTLDKHLAK 380
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C +C + +A L+ H+ K
Sbjct: 180 YMCGECGYRTTYRSHLSQHMRTHTGEKPYKCDKCDYSAAQKGELNKHIAK 229
Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C + + + + H+RTHTGEKPY C QC F + + L H
Sbjct: 443 YMCGECGHRTAQMSDLSKHMRTHTGEKPYKCEQCDFSAIDKSKLKQH 489
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSAS 187
++C C Y + + H+RTHTGEKPY C QC + +A
Sbjct: 501 YMCGECGYKTAYSSLLSRHMRTHTGEKPYKCDQCDYSAAE 540
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 128 LIEHCRTCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
L H RT KS + +H ++C C + + + + H+R HTGEKPY C QC +
Sbjct: 251 LSRHMRTHKSSLEQYVAKHSGEKPYMCGECRFRTADKCKLSRHMRIHTGEKPYKCDQCDY 310
Query: 184 RSASVAGLHYHLKK 197
+A + HL K
Sbjct: 311 SAAEKSTFDKHLMK 324
Score = 40.0 bits (92), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY--ACGQCAFRSASVAGLHYHLK 196
+RT + C CD+ + + ++ H HTGEKPY CG+C +++A + L H++
Sbjct: 462 MRTHTGEKPYKCEQCDFSAIDKSKLKQHQVKHTGEKPYIYMCGECGYKTAYSSLLSRHMR 521
Score = 39.3 bits (90), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 11/60 (18%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTH-----------TGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+RTH +GEKPY CG+C FR+A L H++
Sbjct: 236 YMCEVCGYRTAQRCNLSRHMRTHKSSLEQYVAKHSGEKPYMCGECRFRTADKCKLSRHMR 295
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
H+ HTGEKPY CG+C +R+ + L H++
Sbjct: 170 HVVKHTGEKPYMCGECGYRTTYRSHLSQHMR 200
>gi|62870103|gb|AAY18208.1| CTCF-like protein [Anopheles gambiae]
Length = 680
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C +C +T+ ELI H R + R HK C CDY S + ++ HIRTHTGE
Sbjct: 185 CKHCDNCFTTS-GELIRHIRYRHTHERP----HK--CTECDYASVELSKLKRHIRTHTGE 237
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
KP+ C C + S L H++
Sbjct: 238 KPFQCPHCTYASPDKFKLTRHMR 260
Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 27/59 (45%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
K IRT F C C Y S + + H+R HTGEKPY+C C R L H
Sbjct: 228 KRHIRTHTGEKPFQCPHCTYASPDKFKLTRHMRIHTGEKPYSCDVCFARFTQSNSLKAH 286
Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Query: 150 CYACDYFSYNIGCMR---SHIRTHTGEKPYACGQCA--FRSASVAGLH 192
CY C+Y Y MR SH+ HT +KPY C QCA FR + H
Sbjct: 354 CYRCEYCPYASISMRHLESHLLLHTDQKPYKCDQCAQTFRQKQLLKRH 401
>gi|260801901|ref|XP_002595833.1| hypothetical protein BRAFLDRAFT_232936 [Branchiostoma floridae]
gi|229281082|gb|EEN51845.1| hypothetical protein BRAFLDRAFT_232936 [Branchiostoma floridae]
Length = 278
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CDY + ++ H+ HTGEKP C +C FR+A L YHLK
Sbjct: 1 FKCAHCDYAGGSRKALKQHMSRHTGEKPLGCQECGFRTAYRTALDYHLK 49
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
VC C+Y + + M HIRTHTGEKPY+C +C +R+ + + L +H +
Sbjct: 224 LVCKDCNYRTMHKADMNRHIRTHTGEKPYSCEECDYRATNKSALVFHTR 272
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C Y S + +H++TH GEKP+ C QC +R+A A L+ H++
Sbjct: 140 FACERCPYKSRYKSGLTNHLKTHMGEKPHKCEQCGYRAAQKATLYRHMR 188
Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 24/47 (51%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
C C Y + + H+RTHTGEKPY C C A+ L H+K
Sbjct: 170 CEQCGYRAAQKATLYRHMRTHTGEKPYPCTVCGRSCATEYLLETHMK 216
>gi|444730818|gb|ELW71191.1| Transcriptional repressor CTCFL [Tupaia chinensis]
Length = 787
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 17/118 (14%)
Query: 79 CKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKS 137
C HC + ++ DL H + +A T C YC AV LI+H +T K+
Sbjct: 510 CPHCATVIARKSDLRVHLRNL------HAPRTSGMKCRYCPAVFHERYT-LIQHQKTHKN 562
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA--FRSASVAGLHY 193
+F C C Y M H+RTHTGEKP+ C C+ FR + +H+
Sbjct: 563 -------EKRFKCEHCGYACNQARHMAVHVRTHTGEKPFTCLSCSKHFRQKQLLSVHF 613
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S +R H+R+HTGE+P+ CG C++
Sbjct: 332 TSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLRRHVRSHTGERPFQCGLCSYACKDTY 391
Query: 190 GLHYHLK 196
L H++
Sbjct: 392 KLKRHMR 398
Score = 43.1 bits (100), Expect = 0.063, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 130 EHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSAS 187
E KS +T + F C C + S + H++THTGEKP+ C C AFR+ +
Sbjct: 247 EKANPTKSQRKTKGAKRIFCCDVCSFTSSRVSSFNRHMQTHTGEKPHLCHLCLKAFRTTT 306
Query: 188 VAGLH 192
+ H
Sbjct: 307 LLRNH 311
Score = 41.2 bits (95), Expect = 0.26, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 27/57 (47%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+R+ F C C Y + ++ H+RTH+GEKPY C C R + H+
Sbjct: 441 VRSHTGERPFQCGLCSYACKDTYKLKRHMRTHSGEKPYECHVCHARFTQSGTMKVHI 497
Score = 39.7 bits (91), Expect = 0.65, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+R H+R+HTGE+P+ CG C++ L H++
Sbjct: 437 LRRHVRSHTGERPFQCGLCSYACKDTYKLKRHMR 470
Score = 36.2 bits (82), Expect = 7.9, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKTY 199
+C+ C +R+HI THTG +P+ CG C AF ++ H K T+
Sbjct: 294 LCHLCLKAFRTTTLLRNHINTHTGTRPFKCGDCDMAFVTSGELVRHRRYKHTH 346
>gi|296197404|ref|XP_002746269.1| PREDICTED: zinc finger protein 40 [Callithrix jacchus]
Length = 2725
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 106 ANNTFSPFC-IYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH--KFVCYACDYFSYNIGC 162
AN+T SP +Y +++ +N+ +E + C +++ + K++C C+
Sbjct: 362 ANSTQSPPTPVYNSTHVASVVNQSVE--QMCNLLLKDQKPKKQGKYICEYCNRACAKPSV 419
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ HIR+HTGE+PY C C F + + L+ H K H
Sbjct: 420 LLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAH 457
Score = 44.7 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 2085 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 2140
>gi|391341281|ref|XP_003744959.1| PREDICTED: lysine-specific demethylase 8-like [Metaseiulus
occidentalis]
Length = 523
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 148 FVCYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
F C C+ Y S ++ H RTHTGEKPY C C FR+ + + H H +K +
Sbjct: 447 FPCKYCNSYASERFDSLKKHFRTHTGEKPYVCPICQFRTVTNSSFHQHFRKEHQ 500
>gi|380791519|gb|AFE67635.1| zinc finger protein 40, partial [Macaca mulatta]
Length = 928
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 106 ANNTFSPFC-IYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH--KFVCYACDYFSYNIGC 162
AN+T SP IY +++ +N+ +E + C +++ + K++C C+
Sbjct: 363 ANSTQSPPTPIYNSTHVASVVNQSVE--QMCNLLLKDQKPKKQGKYICEYCNRACAKPSV 420
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ HIR+HTGE+PY C C F + + L+ H K H
Sbjct: 421 LLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAH 458
>gi|260787877|ref|XP_002588978.1| hypothetical protein BRAFLDRAFT_89169 [Branchiostoma floridae]
gi|229274150|gb|EEN44989.1| hypothetical protein BRAFLDRAFT_89169 [Branchiostoma floridae]
Length = 287
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%)
Query: 110 FSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRT 169
+SP C+ S ++ + S ++++ ++C C Y + H+RT
Sbjct: 63 WSPTKDLCERDASKTKDQPTASKSSLVSQLKSNTGEKPYMCGKCGYRTAKKSQFSRHMRT 122
Query: 170 HTGEKPYACGQCAFRSASVAGLHYHLKK 197
HTG+KPY C QC + +A + L HL K
Sbjct: 123 HTGDKPYKCDQCDYSAAQKSNLDRHLAK 150
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + C CDY + + H+ HTG+KP+ CG+C +R+A + L H+
Sbjct: 120 MRTHTGDKPYKCDQCDYSAAQKSNLDRHLAKHTGDKPFMCGECGYRAARKSTLSQHM 176
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H HTG+KPY CG+C +++A L+ H++
Sbjct: 185 YKCDQCDYATARKSSLDQHQAKHTGDKPYMCGECGYKAARKFTLYQHMR 233
Score = 42.7 bits (99), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + H+ TH+G KPY C QC + +A + L H K
Sbjct: 157 FMCGECGYRAARKSTLSQHMSTHSGNKPYKCDQCDYATARKSSLDQHQAK 206
Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
++C C Y + + H+RTHTG KPY C QC + +A
Sbjct: 213 YMCGECGYKAARKFTLYQHMRTHTGNKPYKCDQCDYSTA 251
>gi|260806364|ref|XP_002598054.1| hypothetical protein BRAFLDRAFT_62602 [Branchiostoma floridae]
gi|229283325|gb|EEN54066.1| hypothetical protein BRAFLDRAFT_62602 [Branchiostoma floridae]
Length = 713
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT ++C CDY + + + HIR HTGEKPY CG+C +R+ + L H++
Sbjct: 240 MRTHTGDKPYMCDQCDYSTAHKSDLVKHIRKHTGEKPYMCGECGYRTVQKSELSQHMR 297
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGEKPY C QC + +A L YH+
Sbjct: 632 YMCGECGYRAAQRSTLSKHMRTHTGEKPYKCDQCEYSTAQKVNLDYHI 679
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
IR ++C C Y + + H+RTHTGEKPY CGQC + +A L H K
Sbjct: 268 IRKHTGEKPYMCGECGYRTVQKSELSQHMRTHTGEKPYKCGQCDYSAARKHSLDRHRTK 326
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F C CDY S+++ H+RTHTGEKPY C QC + ++ L H+
Sbjct: 417 FKCEQCDYSSFDLS---KHMRTHTGEKPYKCDQCDYSASQKPHLELHM 461
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 20/141 (14%)
Query: 58 ILNLNLSVLLVTTIPTQNHSLCKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPF-CI 115
N +LS + T + + +C C +H DL+ H IR + P+ C
Sbjct: 231 AFNGSLSRHMRTHTGDKPY-MCDQCDYSTAHKSDLVKH-------IRKHTGE--KPYMCG 280
Query: 116 YCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKP 175
C + +EL +H +RT + C CDY + + H HTGEKP
Sbjct: 281 EC-GYRTVQKSELSQH-------MRTHTGEKPYKCGQCDYSAARKHSLDRHRTKHTGEKP 332
Query: 176 YACGQCAFRSASVAGLHYHLK 196
+ CG+C +R+A + L H++
Sbjct: 333 FMCGECGYRTARKSDLSEHMR 353
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + H+R HTGEKPY C QC + +AS + + HL K
Sbjct: 333 FMCGECGYRTARKSDLSEHMRIHTGEKPYKCDQCDYSAASKSNFNKHLAK 382
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CD+ + G + +H THTG+KPY C +C +R+A + L H++
Sbjct: 493 MRTHTGEKPFKCELCDFAAAEKGNLVTHQATHTGDKPYMCEKCGYRTAQKSALSSHMR 550
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H HTG+KPY CG+C +RSA + L H++
Sbjct: 66 YKCDKCDYSATRKSTLDQHRTKHTGDKPYMCGECGYRSAQKSTLSQHMR 114
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
++C C Y S + H+RTHTGEKPY C QC + +A + L H T+
Sbjct: 94 YMCGECGYRSAQKSTLSQHMRTHTGEKPYKCDQCDYSAARKSTLDEHRATTH 145
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ H GEKPY CG+C +R+A + L H+K
Sbjct: 361 YKCDQCDYSAASKSNFNKHLAKHIGEKPYMCGECGYRTAWKSDLAKHMK 409
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + G + H+RTHTG+KPY C QC + +A + L H++K
Sbjct: 221 YMCGECGYRTAFNGSLSRHMRTHTGDKPYMCDQCDYSTAHKSDLVKHIRK 270
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT ++C CDY + + SHI HTGEKPY CG+C +R+A L H++
Sbjct: 183 MRTHTGEKPYMCGQCDYSAAQKVHVDSHIAAKHTGEKPYMCGECGYRTAFNGSLSRHMR 241
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Query: 95 CKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC 153
C C Y + + + P+ C C +T + L +H IRT + C C
Sbjct: 560 CDQCDYSV--SRKSYLKPYKCGEC-GFSTTRKSTLYQH-------IRTHTGEKPYRCDQC 609
Query: 154 DYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
D+ + + +H THTG+KPY CG+C +R+A + L H++
Sbjct: 610 DFSAAVKVNLVTHQTTHTGDKPYMCGECGYRAAQRSTLSKHMR 652
Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 118 KAVLSTNL----NELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
K+ LS+++ E +C C + + + C C + + + HIRTHTGE
Sbjct: 542 KSALSSHMRIHTGEKHYNCDQCDYSVSRKSYLKPYKCGECGFSTTRKSTLYQHIRTHTGE 601
Query: 174 KPYACGQCAFRSA 186
KPY C QC F +A
Sbjct: 602 KPYRCDQCDFSAA 614
Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C + + + H+RTHTGEKPY CGQC + +A + H+
Sbjct: 164 FMCGKCGFKTARKTYLSRHMRTHTGEKPYMCGQCDYSAAQKVHVDSHI 211
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 19/26 (73%)
Query: 170 HTGEKPYACGQCAFRSASVAGLHYHL 195
HTGEKPY CG+C FR+ + + L HL
Sbjct: 32 HTGEKPYMCGECGFRTTTKSKLSIHL 57
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
++C C Y + + H+RTHTGEKP+ C C F +A L
Sbjct: 474 YMCGECGYRTARKFTLARHMRTHTGEKPFKCELCDFAAAEKGNL 517
Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 18/67 (26%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGE------------------KPYACGQCAFRSASVA 189
++C C Y + + SH+R HTGE KPY CG+C F + +
Sbjct: 530 YMCEKCGYRTAQKSALSSHMRIHTGEKHYNCDQCDYSVSRKSYLKPYKCGECGFSTTRKS 589
Query: 190 GLHYHLK 196
L+ H++
Sbjct: 590 TLYQHIR 596
Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 14/72 (19%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRT--------------HTGEKPYACGQCAFR 184
+RT + C CDY + + H T HTGEKP+ CG+C F+
Sbjct: 113 MRTHTGEKPYKCDQCDYSAARKSTLDEHRATTHTDEKPYMCEKSKHTGEKPFMCGKCGFK 172
Query: 185 SASVAGLHYHLK 196
+A L H++
Sbjct: 173 TARKTYLSRHMR 184
>gi|47224269|emb|CAG09115.1| unnamed protein product [Tetraodon nigroviridis]
Length = 611
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+S+ D + C+ C + S ++ H++TH GEKPY C C + SA + L HL
Sbjct: 169 RSLTAEDKLAKQHSCHLCGFSSRYANHVKRHMKTHNGEKPYHCPLCTYASAQLVNLQRHL 228
Query: 196 K 196
+
Sbjct: 229 R 229
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 30/59 (50%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
K ++T + C C Y S + ++ H+R HTGEKPY C C F +S+ L H
Sbjct: 197 KRHMKTHNGEKPYHCPLCTYASAQLVNLQRHLRIHTGEKPYKCDSCTFACSSLGNLKRH 255
>gi|260825476|ref|XP_002607692.1| hypothetical protein BRAFLDRAFT_123267 [Branchiostoma floridae]
gi|229293041|gb|EEN63702.1| hypothetical protein BRAFLDRAFT_123267 [Branchiostoma floridae]
Length = 871
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F+C C Y + + H+R HTGEKP+AC QC +R+ A L H++
Sbjct: 816 FMCGTCGYRTTRKALLAKHMRIHTGEKPFACEQCDYRANQKAHLDRHVR 864
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY S MR H + HTGE+P+ CG C +R+ A L H++
Sbjct: 788 YTCDLCDYTSAYKVTMRYHKQIHTGERPFMCGTCGYRTTRKALLAKHMR 836
>gi|260823138|ref|XP_002604040.1| hypothetical protein BRAFLDRAFT_119784 [Branchiostoma floridae]
gi|229289365|gb|EEN60051.1| hypothetical protein BRAFLDRAFT_119784 [Branchiostoma floridae]
Length = 1272
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C+Y + G + HI H GEKPY CG+C +RSA +GL+ H+K
Sbjct: 780 MRTHTGDKPYKCDQCNYSAAQKGTLDQHIAAKHNGEKPYMCGECGYRSAYKSGLYRHMK 838
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
R ++C C Y + N G + H+RTHTGEKPY C QC + + + L+ H+
Sbjct: 137 RKPYICGQCGYKATNKGNIAKHVRTHTGEKPYKCDQCDYSATQKSHLNRHV 187
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C+ CD+ + + H+ HTGEKPY CG+C +R+A + L H+K
Sbjct: 677 FKCHQCDFSAAQKSILDKHLVKHTGEKPYMCGECGYRAAHRSNLSQHMK 725
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 10/77 (12%)
Query: 119 AVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAC 178
A L + LNE I I P+ +C C Y + N + H+RTHTGEKPY C
Sbjct: 1081 AALKSRLNEHIA------RHIGDKPY----MCGECGYRAANKSRLAIHMRTHTGEKPYKC 1130
Query: 179 GQCAFRSASVAGLHYHL 195
QC + +A + L HL
Sbjct: 1131 DQCDYSAAEKSALTRHL 1147
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++T + C CDY + ++ H+ HTGEKPY CG+C +R+ + L HL+
Sbjct: 330 MKTHSGEKPYKCDQCDYSAAEKSNLKRHLVKHTGEKPYMCGECGYRTTEKSNLTKHLR 387
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+ HTGEKPY CG+C +RSA L H++
Sbjct: 55 YMCGECGYRASQKSDLSKHMTAHTGEKPYKCGECGYRSAYKCNLSQHMR 103
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKPY CG+C FR+ + L H++
Sbjct: 1186 YKCDQCDYSAAQKCDLDKHLVKHTGEKPYICGECGFRTGRKSDLFRHMR 1234
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKP+ C QC F +A + L HL K
Sbjct: 584 YMCGECGYRAAQKYHLSRHMRTHTGEKPFKCDQCDFSAAQKSTLDKHLAK 633
Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + HI HTGEKPY CG+C +R+ + L H++
Sbjct: 1016 YKCDQCDYSAVRKCHLDEHIARHTGEKPYMCGECGYRTVKKSRLSIHMR 1064
Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSH-IRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT +F C CDY + N + H + HTG KPY CGQC +++ + + H++
Sbjct: 102 MRTHTREKRFKCGQCDYVAVNKSYLDIHTVEKHTGRKPYICGQCGYKATNKGNIAKHVR 160
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + HI H G+KPY CG+C +R+A+ + L H++
Sbjct: 1063 MRTHTGEKPYKCDQCDYSAALKSRLNEHIARHIGDKPYMCGECGYRAANKSRLAIHMR 1120
Score = 43.5 bits (101), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + +H+ +HTG+KPY C QC +R+ L H+K
Sbjct: 274 MRTHTGEKPYKCDQCDYSAGRKSHLDNHLASHTGDKPYICEQCGYRTTEKYRLSQHMK 331
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H++TH+GEKPY C QC + +A + L HL K
Sbjct: 311 YICEQCGYRTTEKYRLSQHMKTHSGEKPYKCDQCDYSAAEKSNLKRHLVK 360
Score = 42.7 bits (99), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 148 FVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHL 195
F C CDY + + HI H+GEKPY CG+C +R++ + L H+
Sbjct: 26 FKCDQCDYSAAQKARLTKHIAAKHSGEKPYMCGECGYRASQKSDLSKHM 74
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGEKPY C QC + +A + L+ H+
Sbjct: 1044 YMCGECGYRTVKKSRLSIHMRTHTGEKPYKCDQCDYSAALKSRLNEHI 1091
Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 148 FVCYACDYFS-YNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y S Y G R H+++HTGEKPY C QC + A + L H+
Sbjct: 818 YMCGECGYRSAYKSGLYR-HMKSHTGEKPYKCDQCDYSVAQKSTLDKHI 865
Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
++C C+Y + H+RTHTGEKPY C QC +
Sbjct: 931 YMCGECEYRTVRKSNFSDHMRTHTGEKPYKCDQCDY 966
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTG+KPY C QC + +A L H+
Sbjct: 761 YMCGECGYRATLKPLLSRHMRTHTGDKPYKCDQCNYSAAQKGTLDQHI 808
Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHI-RTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C CDY + + HI R H +KPY CG+C +R+A + L H+ K
Sbjct: 950 MRTHTGEKPYKCDQCDYSAILKSYLNKHISRQHNDDKPYMCGECGYRAACKSDLSKHMAK 1009
Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CDY + + H HTGE PY CG+C +R+ + H++
Sbjct: 894 MRTHTGEKPFKCDQCDYSASKKCYLDQHKTKHTGEYPYMCGECEYRTVRKSNFSDHMR 951
Score = 40.0 bits (92), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G M ++ THTGEKPY CG+C +R+A L H++
Sbjct: 569 GNMGRNVLTHTGEKPYMCGECGYRAAQKYHLSRHMR 604
Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
++C C + + + H+RTHTGEKPY C QC + +A
Sbjct: 1214 YICGECGFRTGRKSDLFRHMRTHTGEKPYKCDQCDYSAA 1252
Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F C C Y + + H+RTHTGEKPY C QC + + + L HL
Sbjct: 255 FKCEDCGYKTAYKCALFLHMRTHTGEKPYKCDQCDYSAGRKSHLDNHL 302
Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGE----KPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HTGE KPY CG+C +R+ + L H++K
Sbjct: 367 YMCGECGYRTTEKSNLTKHLRVHTGEQAGEKPYMCGECGYRTEKKSILVKHMRK 420
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ H+ E P+ CG+C F++ S + L H++
Sbjct: 1119 MRTHTGEKPYKCDQCDYSAAEKSALTRHLFKHSDENPFTCGECGFKTDSNSHLSRHMR 1176
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + +H+RTHTGEKP+ C QC + ++ L H K
Sbjct: 875 YMCGECGYSTTYSSTFSNHMRTHTGEKPFKCDQCDYSASKKCYLDQHKTK 924
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHT--GEKPYACGQCAFRSASVAGLHYHLKK 197
F C C + + + + H+RTHT GEKPY C QC + +A L HL K
Sbjct: 1156 FTCGECGFKTDSNSHLSRHMRTHTPTGEKPYKCDQCDYSAAQKCDLDKHLVK 1207
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
M+RT C CDY + + ++ HI T HTGEKP+ C C +++A L H++
Sbjct: 216 MLRTHTEEKVLKCDQCDYSTSHKYLLKRHIATRHTGEKPFKCEDCGYKTAYKCALFLHMR 275
Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
+ C CD+ + + H HTGEKPY CG+C +R+
Sbjct: 733 YKCDQCDFSTIWKFSLDQHKTKHTGEKPYMCGECGYRA 770
>gi|260789381|ref|XP_002589725.1| hypothetical protein BRAFLDRAFT_100848 [Branchiostoma floridae]
gi|229274907|gb|EEN45736.1| hypothetical protein BRAFLDRAFT_100848 [Branchiostoma floridae]
Length = 661
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 16/100 (16%)
Query: 96 KTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDY 155
KTCS + +P AN P+ +Y + L T+ KS + P+ +C C +
Sbjct: 377 KTCS-VSQPEANTGDKPY-MYGECGLKTSK----------KSHLSAKPY----ICDECGH 420
Query: 156 FSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ + H+RTHTG+KPY C QC + +A L YHL
Sbjct: 421 RTVRKSDLSQHMRTHTGDKPYKCDQCDYSAAKKCHLKYHL 460
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + + LHYHL K
Sbjct: 525 YMCGECGYRAARKSDLSIHMRTHTGEKPYKCDQCDYSATKKCNLHYHLAK 574
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KPY CG+C +R+A + L H++
Sbjct: 488 MRTHTGEKPYKCDQCDYSAARKHHLDQHLAKHTGDKPYMCGECGYRAARKSDLSIHMR 545
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Query: 103 RPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIG 161
+P ++ P+ C C + ++L +H IRT + C CDY + +
Sbjct: 78 QPQSDTDAKPYICDEC-GYRTARKSDLSQH-------IRTHTGEKAYKCDQCDYSAAHKS 129
Query: 162 CMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ H+ HTGEK Y CG+C +R+A L H++
Sbjct: 130 DLSRHLTMHTGEKSYMCGECGYRAARKFYLSEHMR 164
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T S ++D ++C C Y + + HIRTHTGEK Y C QC + +A + L
Sbjct: 74 TSASQPQSDTDAKPYICDECGYRTARKSDLSQHIRTHTGEKAYKCDQCDYSAAHKSDLSR 133
Query: 194 HL 195
HL
Sbjct: 134 HL 135
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTG+KPY CG C +R+A + L H++
Sbjct: 256 YRCDQCDYSTAQKANLDRHLAKHTGDKPYMCGDCGYRTAWQSELSRHMR 304
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ H G+KPY CG+C +RS + L H+K
Sbjct: 200 YSCDQCDYSAARKSTFKQHLAKHAGDKPYMCGECGYRSTLKSTLSRHMK 248
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A L HL K
Sbjct: 469 YMCGECGYRTTQKCNLTQHMRTHTGEKPYKCDQCDYSAARKHHLDQHLAK 518
Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+ C CDY + + H+ HTG+KPY CG+C +R+ + L H++ Y
Sbjct: 609 YKCDQCDYSAALKSSLDRHLAMHTGDKPYMCGECGYRTVRKSHLSRHMRNPY 660
Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y S + H++THTG KPY C QC + +A A L HL K
Sbjct: 228 YMCGECGYRSTLKSTLSRHMKTHTGYKPYRCDQCDYSTAQKANLDRHLAK 277
Score = 42.7 bits (99), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
++C C Y + + H+RTHTGEKPY C QC + +A A L
Sbjct: 284 YMCGDCGYRTAWQSELSRHMRTHTGEKPYKCDQCDYSAAHKANL 327
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + H+ HTGEKPY+C QC + +A + HL K
Sbjct: 172 YKCDQCDYSTSRKFSLDQHLVKHTGEKPYSCDQCDYSAARKSTFKQHLAK 221
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + C CDY + + H+ HTG+KPY CG+C +R+ + L H+
Sbjct: 544 MRTHTGEKPYKCDQCDYSATKKCNLHYHLAKHTGDKPYMCGECGYRTVLKSDLAKHM 600
Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+ THTGEKPY C QC + +A + L HL
Sbjct: 581 YMCGECGYRTVLKSDLAKHMTTHTGEKPYKCDQCDYSAALKSSLDRHL 628
Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HTGEKPY C QC + ++ L HL K
Sbjct: 144 YMCGECGYRAARKFYLSEHMRIHTGEKPYKCDQCDYSTSRKFSLDQHLVK 193
>gi|432089392|gb|ELK23338.1| Zinc finger protein 256 [Myotis davidii]
Length = 672
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+VC C + +R H R HTGE+PY CG+C AS+ G HYH K
Sbjct: 557 YVCNECGKSYTSRSGLRCHQRVHTGERPYECGECGKSFASITGFHYHQK 605
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+VC C + +R H R HTGEKPY CG+C LH H +
Sbjct: 501 YVCNECGKSYTSHSGLRCHQRVHTGEKPYECGECGKSFTWKVTLHRHQR 549
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+R H R HTGEKPY C +C A+ GL H +
Sbjct: 628 LRCHQRVHTGEKPYECNECGKSFAATYGLRSHQR 661
Score = 36.6 bits (83), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+VC C + +R H R HTGEKPY C +C + + H H K
Sbjct: 389 YVCNECGKSFTDSNGLRCHQRFHTGEKPYECSECGKSFITSSRFHQHQK 437
>gi|260834075|ref|XP_002612037.1| hypothetical protein BRAFLDRAFT_227720 [Branchiostoma floridae]
gi|229297410|gb|EEN68046.1| hypothetical protein BRAFLDRAFT_227720 [Branchiostoma floridae]
Length = 361
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 148 FVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CDY + G + HI T HTGEKPY CG+C FR+A A L+ H +
Sbjct: 248 FKCDRCDYSATQKGRLDEHIVTKHTGEKPYTCGECEFRTAFKAALYRHKR 297
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C++ + + H RTHTGEKPY C +C F++A L H +
Sbjct: 277 YTCGECEFRTAFKAALYRHKRTHTGEKPYMCDECGFKTAKKWYLSVHKR 325
Score = 36.6 bits (83), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RT ++C C + + + H R HTG+KP+ C QC + A+ + L HLK
Sbjct: 297 RTHTGEKPYMCDECGFKTAKKWYLSVHKRIHTGDKPFKCDQCNYCGATNSHLKNHLK 353
>gi|260795623|ref|XP_002592804.1| hypothetical protein BRAFLDRAFT_65386 [Branchiostoma floridae]
gi|229278028|gb|EEN48815.1| hypothetical protein BRAFLDRAFT_65386 [Branchiostoma floridae]
Length = 357
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+S +RT + C C +G + SHIRTHTGEKPY C +C + ++GL H+
Sbjct: 216 ESHMRTHTGEKPYKCEECRRQFSRLGNLESHIRTHTGEKPYKCEECGKEFSQLSGLKRHI 275
Query: 196 K 196
+
Sbjct: 276 R 276
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 35/60 (58%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
S +R++ ++ C C+ + +++H+RTHTGEKPY C +C+ + + L H++
Sbjct: 21 SSVRSNKKEKRYRCEECNKQFSQLCNLKAHMRTHTGEKPYTCEECSRQFSQQGDLKKHMR 80
Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 50/120 (41%), Gaps = 19/120 (15%)
Query: 79 CKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
C+ C Q S DL H +T + PF C C S L L +H RT
Sbjct: 62 CEECSRQFSQQGDLKKHMRT---------HTGEKPFRCEECSKQFSV-LGNLTKHTRT-- 109
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
PF+ C C + ++ HIRTHTGEKPY C +C + + + L H +
Sbjct: 110 -HTGEKPFK----CEECSKQFSELCSLKKHIRTHTGEKPYRCEECRRQFSQLGDLKRHTR 164
Score = 43.1 bits (100), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 11/100 (11%)
Query: 107 NNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYF 156
N FS C KA + T+ E C C K +RT F C C
Sbjct: 38 NKQFSQLCNL-KAHMRTHTGEKPYTCEECSRQFSQQGDLKKHMRTHTGEKPFRCEECSKQ 96
Query: 157 SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+G + H RTHTGEKP+ C +C+ + + + L H++
Sbjct: 97 FSVLGNLTKHTRTHTGEKPFKCEECSKQFSELCSLKKHIR 136
Score = 42.7 bits (99), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 51/119 (42%), Gaps = 17/119 (14%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKS 137
C+ C Q S L L+ IR + P+ C C S L+ L H
Sbjct: 230 CEECRRQFSRLGNLE------SHIRTHTGE--KPYKCEECGKEFS-QLSGLKRH------ 274
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IRT ++C C + G ++ HIRTHTGEKPY C C+ + + L H++
Sbjct: 275 -IRTHTGEKPYMCEECSRQFSDPGHLKIHIRTHTGEKPYRCEGCSRQFNRLCNLKIHMR 332
Score = 39.7 bits (91), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IRT + C C +G ++ H R HT EKPY C +C+ + + + L H+
Sbjct: 132 KKHIRTHTGEKPYRCEECRRQFSQLGDLKRHTRIHTREKPYRCEECSIQFSQLVALKTHM 191
Query: 196 K 196
+
Sbjct: 192 R 192
>gi|417407056|gb|JAA50161.1| Putative transcription factor hivep3 [Desmodus rotundus]
Length = 2715
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Query: 102 IRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH--KFVCYACDYFSYN 159
+ P + P +Y +++ +N +E + C +++ + K++C C+
Sbjct: 360 VSPAQSTQSPPIPVYNSTPVTSVVNHSVE--QMCNLLLKDQKPKKQGKYICEYCNRACAK 417
Query: 160 IGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ HIR+HTGE+PY C C F + + L+ H K H
Sbjct: 418 PSVLLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAH 458
Score = 44.7 bits (104), Expect = 0.021, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 2075 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKTH 2130
>gi|410950650|ref|XP_003982016.1| PREDICTED: zinc finger protein 333 [Felis catus]
Length = 669
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 41/141 (29%), Positives = 54/141 (38%), Gaps = 33/141 (23%)
Query: 79 CKHCHSQLSHL-DLLDH-----------CKTCSYMIRPNAN--------NTFSPF-CIYC 117
C+ C + DL+ H C+ C + ++N PF C C
Sbjct: 372 CRQCEKSFRYSSDLIRHEKTHTAEKCFECQECRQTFKYSSNLRRHLRTHTGEKPFECAQC 431
Query: 118 KAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA 177
+ N N LI H R + C C +RSH+RTHTGEKP+
Sbjct: 432 GKTFTRNFN-LILHQRNHTG-------EKPYACKDCGKAFNQPSSLRSHVRTHTGEKPFG 483
Query: 178 CGQC--AFRSASVAGLHYHLK 196
C QC AFR S L HL+
Sbjct: 484 CSQCGKAFREHS--SLKTHLR 502
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 10/89 (11%)
Query: 118 KAVLSTNLNELIEHCRTCKSMIRTDPFR--HK--------FVCYACDYFSYNIGCMRSHI 167
K L T+ E C C RT HK + C C + ++SH+
Sbjct: 498 KTHLRTHTREKPYECSQCGKPFRTSTHLNVHKRIHTGEKLYECATCGQVLSRLSTLKSHM 557
Query: 168 RTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RTHTGEKPYAC +C + + L H +
Sbjct: 558 RTHTGEKPYACQECGRAFSEPSSLRKHAR 586
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 35/83 (42%), Gaps = 8/83 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C C VLS T KS +RT + C C +R H RTHTG+
Sbjct: 540 CATCGQVLS--------RLSTLKSHMRTHTGEKPYACQECGRAFSEPSSLRKHARTHTGK 591
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
KPYAC +C + L H++
Sbjct: 592 KPYACQECGRAFGQSSHLIVHVR 614
>gi|260832600|ref|XP_002611245.1| hypothetical protein BRAFLDRAFT_207658 [Branchiostoma floridae]
gi|229296616|gb|EEN67255.1| hypothetical protein BRAFLDRAFT_207658 [Branchiostoma floridae]
Length = 265
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 112 PF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
PF C C + N + L EH R S P++ C CDY + + H+R H
Sbjct: 69 PFMCGQC-GYSTNNRSRLAEHIR---SHTGVKPYK----CDYCDYSTAQKSHLTEHMRRH 120
Query: 171 TGEKPYACGQCAFRSASVAGLHYHLKK 197
TGEKPY C QC + AS + L H+ K
Sbjct: 121 TGEKPYKCDQCDYSGASKSNLDQHMAK 147
Score = 43.5 bits (101), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F C CDY + + H R HTGEKPY C QC + +A L+ HL
Sbjct: 14 FACTECDYRATTSTKLSIHTRRHTGEKPYKCDQCDYSAAHKHSLNIHL 61
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + + H HTGEKPY C +C F++A+ + L H++K
Sbjct: 210 YKCDRCDYSAAHKTALDRHKARHTGEKPYVCVECGFKTANRSYLTVHMRK 259
Score = 39.3 bits (90), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+++C C + + ++ H+R HTG KPY C QC + +A + L H K
Sbjct: 153 RYMCGECGFRTTAKSSLKVHMRRHTGMKPYKCDQCDYSAAQKSNLDRHKAK 203
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 134 TCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T KS ++ RH + C CDY + + H HTGEKPY C +C + +A
Sbjct: 164 TAKSSLKVHMRRHTGMKPYKCDQCDYSAAQKSNLDRHKAKHTGEKPYKCDRCDYSAAHKT 223
Query: 190 GLHYH 194
L H
Sbjct: 224 ALDRH 228
Score = 36.2 bits (82), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + + H+ H G KP+ CGQC + + + + L H++
Sbjct: 42 YKCDQCDYSAAHKHSLNIHLANHAGNKPFMCGQCGYSTNNRSRLAEHIR 90
>gi|82882230|gb|ABB92839.1| BORIS-like protein [Homo sapiens]
gi|111550144|gb|ABH10094.1| BORIS transcription factor transcript variant A3 [Homo sapiens]
Length = 613
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H +T K+ +F C C Y M +HIRTHTGE
Sbjct: 410 CRYCSAVFHERY-ALIQHQKTHKN-------EKRFKCKHCSYACKQERHMTAHIRTHTGE 461
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KP+ C C FR + H+ + YH
Sbjct: 462 KPFTCLSCNKCFRQKQLLNAHF---RKYH 487
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 324 TSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 383
Query: 190 GLHYHLK 196
L H++
Sbjct: 384 KLKRHMR 390
Score = 37.7 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 130 EHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSAS 187
E ++ K+ +T + F C C + S + H++THT EKP+ C C FR+ +
Sbjct: 239 EKAKSTKNQRKTKGAKGTFHCDVCMFTSSRMSSFNRHMKTHTSEKPHLCHLCLKTFRTVT 298
Query: 188 VAGLH 192
+ H
Sbjct: 299 LLRNH 303
Score = 36.2 bits (82), Expect = 7.7, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 12/81 (14%)
Query: 131 HCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ 180
HC C ++T +C+ C + +R+H+ THTG +PY C
Sbjct: 258 HCDVCMFTSSRMSSFNRHMKTHTSEKPHLCHLCLKTFRTVTLLRNHVNTHTGTRPYKCND 317
Query: 181 C--AFRSASVAGLHYHLKKTY 199
C AF ++ H K T+
Sbjct: 318 CNMAFVTSGELVRHRRYKHTH 338
>gi|410953480|ref|XP_003983398.1| PREDICTED: transcriptional repressor CTCFL [Felis catus]
Length = 645
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV L++H +T K+ R F+ ++ YAC + M HIRTHTGE
Sbjct: 458 CRYCTAVFHERY-ALVQHQKTHKNEKR---FKCEYCSYACKQERH----MTVHIRTHTGE 509
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KP+ C C FR + +H+ + YH
Sbjct: 510 KPFTCVSCNKCFRQKQLLNVHF---RKYH 535
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H R+HTGE+P+ C C++ S
Sbjct: 322 TSGELVRHRRYKHTHEKPFKCSICKYASVEASKLKRHTRSHTGERPFQCSLCSYASKDTY 381
Query: 190 GLHYHLK 196
L H++
Sbjct: 382 KLKRHMR 388
Score = 43.5 bits (101), Expect = 0.050, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 112 PF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
PF C CK S ++L H R S PF+ C C Y S + ++ H+RTH
Sbjct: 339 PFKCSICKYA-SVEASKLKRHTR---SHTGERPFQ----CSLCSYASKDTYKLKRHMRTH 390
Query: 171 TGEKPYACGQCAFRSASVAGLHYHL 195
+GEKPY C C R + H+
Sbjct: 391 SGEKPYECHVCHTRFTQSGTMKIHV 415
Score = 43.1 bits (100), Expect = 0.068, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 112 PFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHT 171
PFC S+ ++ H ++T VC+ C + +R+HI THT
Sbjct: 254 PFCCDSCVFTSSRISSFNRH-------MKTHSTEKPHVCHLCLKAFRTVTLLRNHINTHT 306
Query: 172 GEKPYACGQC--AFRSASVAGLHYHLKKTY 199
G +PY CG C AF ++ H K T+
Sbjct: 307 GTRPYKCGDCVMAFVTSGELVRHRRYKHTH 336
Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 129 IEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSA 186
+E + + + + F C +C + S I H++TH+ EKP+ C C AFR+
Sbjct: 236 VEKANSTDNQKKAKEAKRPFCCDSCVFTSSRISSFNRHMKTHSTEKPHVCHLCLKAFRTV 295
Query: 187 SVAGLH 192
++ H
Sbjct: 296 TLLRNH 301
>gi|326432905|gb|EGD78475.1| zinc finger protein [Salpingoeca sp. ATCC 50818]
Length = 480
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 29/48 (60%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+F C C Y + G + SH RTHTGEKPY C QC+F++A L H
Sbjct: 172 RFKCDQCKYKTAYKGHLTSHKRTHTGEKPYKCDQCSFKTAHKKSLTTH 219
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
+ C CDY + N + +H RTH GEKPY C QC+F++A
Sbjct: 369 YKCDQCDYKTANKKHLTTHQRTHIGEKPYNCDQCSFKTA 407
Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
T RHK C C+Y + + +H RTHTGEKP+ C QC +++A L H K+
Sbjct: 252 TGEKRHK--CDQCEYKTERKRDLLAHQRTHTGEKPFKCDQCEYKTARKRDLLAHQKR 306
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C + + + +H R HTGEKPY C QC+F++A + L H +
Sbjct: 313 FKCDQCSFKTAYKRTLTTHKRIHTGEKPYKCDQCSFKTAHKSTLARHKR 361
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
S RT + C C + + + + +H +THTGEKPY C QC +R+A
Sbjct: 190 SHKRTHTGEKPYKCDQCSFKTAHKKSLTTHKQTHTGEKPYKCDQCEYRTA 239
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
+ C C+Y + M H R HTGEKPY C QC +++A
Sbjct: 425 YKCDQCEYKTAYKRNMPRHKRIHTGEKPYKCDQCEYKTA 463
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
F C C+Y + + +H + HTGEKP+ C QC+F++A
Sbjct: 285 FKCDQCEYKTARKRDLLAHQKRHTGEKPFKCDQCSFKTA 323
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 25/44 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+ C C+Y + C+ +H RTHTGEK + C QC +++ L
Sbjct: 229 YKCDQCEYRTARRDCLLAHQRTHTGEKRHKCDQCEYKTERKRDL 272
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C + + + + H RTHTGEK Y C QC +++A+ L H +
Sbjct: 341 YKCDQCSFKTAHKSTLARHKRTHTGEKTYKCDQCDYKTANKKHLTTHQR 389
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 151 YACDYFSYNIG---CMRSHIRTHTGEKPYACGQCAFRSA 186
Y CD S+ + +H R HTGEKPY C QC +++A
Sbjct: 397 YNCDQCSFKTAYKHILTTHKRIHTGEKPYKCDQCEYKTA 435
>gi|260823136|ref|XP_002604039.1| hypothetical protein BRAFLDRAFT_71671 [Branchiostoma floridae]
gi|229289364|gb|EEN60050.1| hypothetical protein BRAFLDRAFT_71671 [Branchiostoma floridae]
Length = 1052
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CDY + + HI HTGEKPY CG+C +R+A + L H++
Sbjct: 845 MRTHTGEKPFKCDQCDYSAALKSHLNEHIARHTGEKPYMCGECGYRTAKKSRLTIHMR 902
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY CG+C +R+A L H++
Sbjct: 507 MRTHTGEKPYKCDQCDYSAAQKSTLDFHLAKHTGEKPYMCGECGYRTAKKCNLSLHMR 564
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + + H+RTHTGEKPY C QC + +A + L +HL K
Sbjct: 488 YMCGECGHRTTHKSYLSKHMRTHTGEKPYKCDQCDYSAAQKSTLDFHLAK 537
Score = 47.0 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKP+ C QC F +A + L HL K
Sbjct: 367 YMCEECGYRAAQKYHLSRHMRTHTGEKPFKCDQCDFSAAQKSTLDKHLAK 416
Score = 47.0 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G M H+ HTGEKPY CG+C FR+A A L H++
Sbjct: 247 GNMERHVVKHTGEKPYMCGECGFRTAQKANLSKHMR 282
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC F + + L +HL K
Sbjct: 544 YMCGECGYRTAKKCNLSLHMRTHTGEKPYKCDQCDFSAIRKSTLDFHLVK 593
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A + L HL K
Sbjct: 882 YMCGECGYRTAKKSRLTIHMRTHTGEKPYKCDQCDYSAAEKSALTRHLFK 931
Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H++ H+GEKP+ CG+C +R+A + L H++
Sbjct: 798 YKCDHCDYSAARKSSLDEHLQIHSGEKPFMCGECGYRTAKKSRLARHMR 846
Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+VC C Y + + H+RTHTGEKPY C QC + +A L H+
Sbjct: 600 YVCCECGYRAVKKSRLAIHMRTHTGEKPYKCEQCDYTAAQKTNLDQHI 647
Score = 45.1 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 136 KSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
KS + F+H F C C + + + + H+RTHT E+PY C QC + +A +GL
Sbjct: 922 KSALTRHLFKHSDENPFTCGECGFKTDSNSHLSRHMRTHTRERPYQCDQCDYSAAQKSGL 981
Query: 192 HYHLKK 197
H +K
Sbjct: 982 DGHKRK 987
Score = 44.7 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H R HTGEK + CG+C FR+ L H++
Sbjct: 957 MRTHTRERPYQCDQCDYSAAQKSGLDGHKRKHTGEKLFVCGECGFRAGRNCDLSRHMR 1014
Score = 44.3 bits (103), Expect = 0.030, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHI-RTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT F C C+Y + ++ H+ R H G+KPY CG+C +R+A L H+ K
Sbjct: 732 MRTHTGEKPFKCDQCNYSTILKSYLKRHVSRQHNGDKPYMCGECGYRAARKDKLSQHMTK 791
Score = 44.3 bits (103), Expect = 0.030, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CD+ + + H+ HTGEKPY CG+C R+ + L H++
Sbjct: 460 FKCDKCDFSAAQKSILDKHLVKHTGEKPYMCGECGHRTTHKSYLSKHMR 508
Score = 42.4 bits (98), Expect = 0.097, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
++C C+Y + H+RTHTGEKP+ C QC + + + L H+ + ++
Sbjct: 713 YMCGECEYGTLRKSHFSDHMRTHTGEKPFKCDQCNYSTILKSYLKRHVSRQHN 765
Score = 41.6 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CD+ + + H+ HTG+KPY C +C +R+ + L H++
Sbjct: 563 MRTHTGEKPYKCDQCDFSAIRKSTLDFHLVKHTGDKPYVCCECGYRAVKKSRLAIHMR 620
Score = 41.2 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
++C C Y + SH+RTHTGEKP+ C QC + +A + L H KT H
Sbjct: 657 YMCGECGYSTTYSSTFSSHMRTHTGEKPFKCDQCDYSAARKSSLEQH--KTKH 707
Score = 40.8 bits (94), Expect = 0.30, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
FVC C + + + H+RTHTGE+PY C C + +A L+ H
Sbjct: 994 FVCGECGFRAGRNCDLSRHMRTHTGERPYKCDHCDYAAAQKTRLNQH 1040
Score = 39.3 bits (90), Expect = 0.92, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+ HTGE+PY C C + +A + L HL+
Sbjct: 770 YMCGECGYRAARKDKLSQHMTKHTGERPYKCDHCDYSAARKSSLDEHLQ 818
Score = 37.7 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C + + + H+RTHTGE PY C C + + L H
Sbjct: 262 YMCGECGFRTAQKANLSKHMRTHTGENPYKCDMCDYSAIQKVHLKQH 308
Score = 37.0 bits (84), Expect = 3.9, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + + C CDY + ++ H HTG+KP+ C QC + +A A L H+
Sbjct: 281 MRTHTGENPYKCDMCDYSAIQKVHLKQHAAAKHTGKKPFKCDQCDYSAAQKARLTKHI 338
Score = 36.2 bits (82), Expect = 6.8, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G M H+ HT EKPY CG C +++ + L H++
Sbjct: 87 GDMGRHMVKHTVEKPYMCGDCGYKAPEMTSLFLHMR 122
Score = 36.2 bits (82), Expect = 7.3, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + HI T HTGEK Y CG+C + + + H++
Sbjct: 619 MRTHTGEKPYKCEQCDYTAAQKTNLDQHIATKHTGEKTYMCGECGYSTTYSSTFSSHMR 677
>gi|260819172|ref|XP_002604911.1| hypothetical protein BRAFLDRAFT_136114 [Branchiostoma floridae]
gi|229290240|gb|EEN60921.1| hypothetical protein BRAFLDRAFT_136114 [Branchiostoma floridae]
Length = 452
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C Y + HIR HTGEKPY C QC + +A + L+YHLKK
Sbjct: 6 FKCGDCGYRGAKKYDLSRHIRIHTGEKPYKCDQCDYTAAEKSSLNYHLKK 55
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C+Y + +R H+RTHTGEKPY C QC + +A ++ L YHL K
Sbjct: 175 YKCDTCEYRAARKTHLRLHMRTHTGEKPYKCNQCDYSAAQMSVLQYHLTK 224
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + ++ H+ HTGEKP+ CG+C +R+A + L H++
Sbjct: 194 MRTHTGEKPYKCNQCDYSAAQMSVLQYHLTKHTGEKPFICGECGYRTAKKSNLVIHMR 251
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C C +H LD ++ R + FS C C + ++L H T
Sbjct: 261 CDQCDYSAAHKPHLD-----EHLARHSGEKPFS--CGQC-GYRTAKKSDLSRHVHT---H 309
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ PF+ C CDY + + ++ H+ HTGEKP+ CGQC + + L H++
Sbjct: 310 TKDKPFK----CDQCDYSAADKASLKHHLAKHTGEKPFKCGQCGYGTTQRIALTIHMR 363
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C CDY + + + H+ H+GEKP++CGQC +R+A + L H+
Sbjct: 259 YKCDQCDYSAAHKPHLDEHLARHSGEKPFSCGQCGYRTAKKSDLSRHV 306
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ THTGEKPY CG+C +R+ L H++
Sbjct: 371 YKCDQCDYATAGRSNLNKHMTTHTGEKPYMCGECGYRTTRRTHLIQHIR 419
Score = 43.1 bits (100), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H++ HTGE+P+ CG C +R+ + L H++
Sbjct: 34 YKCDQCDYTAAEKSSLNYHLKKHTGERPFMCGDCGYRATKQSDLTKHIR 82
Score = 43.1 bits (100), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + HIRTHTGEKPY C QC + +A + L H K
Sbjct: 399 YMCGECGYRTTRRTHLIQHIRTHTGEKPYKCDQCKYSTAYQSDLAKHKK 447
Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C Y + + HIR HTGE+PY C QC + + + L+ H+
Sbjct: 62 FMCGDCGYRATKQSDLTKHIRVHTGERPYKCDQCDYSAKEKSSLNQHM 109
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C Y + + H+R HTGEKPY C QC + +A L HL
Sbjct: 231 FICGECGYRTAKKSNLVIHMRVHTGEKPYKCDQCDYSAAHKPHLDEHL 278
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C Y + + H+ THT +KP+ C QC + +A A L +HL K
Sbjct: 287 FSCGQCGYRTAKKSDLSRHVHTHTKDKPFKCDQCDYSAADKASLKHHLAK 336
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F C C Y + + H+R HTGEKPY C QC + +A + L+ H+
Sbjct: 343 FKCGQCGYGTTQRIALTIHMRVHTGEKPYKCDQCDYATAGRSNLNKHM 390
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
F+C C Y + + H+RTH+GEKPY C QC + +A L H
Sbjct: 119 FMCGECGYRASKKSDLFRHMRTHSGEKPYKCDQCDYSAARKTTLDDH 165
Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Query: 112 PF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSH-IRT 169
PF C C +T ++L +H IR + C CDY + + H I
Sbjct: 61 PFMCGDC-GYRATKQSDLTKH-------IRVHTGERPYKCDQCDYSAKEKSSLNQHMIYK 112
Query: 170 HTGEKPYACGQCAFRSASVAGLHYHLK 196
HT EKP+ CG+C +R++ + L H++
Sbjct: 113 HTSEKPFMCGECGYRASKKSDLFRHMR 139
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 45/112 (40%), Gaps = 18/112 (16%)
Query: 95 CKTCSYMIRPNAN---------NTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPF 144
C C Y + ++ + PF C C ++ ++L H +RT
Sbjct: 92 CDQCDYSAKEKSSLNQHMIYKHTSEKPFMCGEC-GYRASKKSDLFRH-------MRTHSG 143
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H H+G+KPY C C +R+A L H++
Sbjct: 144 EKPYKCDQCDYSAARKTTLDDHKTLHSGKKPYKCDTCEYRAARKTHLRLHMR 195
>gi|403270896|ref|XP_003927390.1| PREDICTED: zinc finger protein 40 [Saimiri boliviensis boliviensis]
Length = 2724
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 106 ANNTFSPFC-IYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH--KFVCYACDYFSYNIGC 162
AN+T SP +Y +++ +N+ +E + C +++ + K++C C+
Sbjct: 362 ANSTQSPPTPVYNSTHVASVVNQSVE--QMCNLLLKDQKPKKQGKYICEYCNRACAKPSV 419
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ HIR+HTGE+PY C C F + + L+ H K H
Sbjct: 420 LLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAH 457
Score = 44.7 bits (104), Expect = 0.023, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 2084 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 2139
>gi|260823078|ref|XP_002604010.1| hypothetical protein BRAFLDRAFT_71701 [Branchiostoma floridae]
gi|229289335|gb|EEN60021.1| hypothetical protein BRAFLDRAFT_71701 [Branchiostoma floridae]
Length = 651
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY CG+C R+AS + L H++
Sbjct: 19 MRTHTGEKPYKCDQCDYSAAQKSSLDQHLSKHTGEKPYMCGECGHRTASKSRLSLHMR 76
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY CG+C R+AS + L H++
Sbjct: 219 MRTHTGEKPYKCDQCDYSAAQKSSLDQHLSKHTGEKPYMCGECGHRTASKSYLSRHMR 276
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY CG+C R+AS + L H++
Sbjct: 75 MRTHTGEKPYKCDQCDYSAAQKYNLDKHLAKHTGEKPYMCGECGHRTASKSRLSRHMR 132
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + ++ H+ HTGEKPY CG+C +R+A + L H++
Sbjct: 561 YKCDQCDYSAAQKSTLKIHLAKHTGEKPYMCGECEYRTADRSTLSRHMR 609
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKPY CG+C R+AS + L H++
Sbjct: 312 YKCDQCDYSAAQKYNLDQHLAKHTGEKPYMCGECGHRTASKSHLSLHMR 360
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + + H+RTHTGEKPY C QC + +A + L HL K
Sbjct: 112 YMCGECGHRTASKSRLSRHMRTHTGEKPYKCDQCDYSAAQKSRLDQHLSK 161
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + + H+RTHTGEKPY C QC + +A + L HL K
Sbjct: 200 YMCGECGHRTASKSRLSLHMRTHTGEKPYKCDQCDYSAAQKSSLDQHLSK 249
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + + H+RTHTGEKPY C QC + + + L HL K
Sbjct: 256 YMCGECGHRTASKSYLSRHMRTHTGEKPYKCDQCDYSAVQKSSLDQHLSK 305
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY C +C +R+ + L HL+
Sbjct: 383 MRTHTGEKPYKCDQCDYSAAQKSRLDQHLSKHTGEKPYMCDECGYRTVLKSDLSRHLR 440
Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 28/59 (47%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C CDY + + H+ HTGE PY C QC + +A L HL K
Sbjct: 275 MRTHTGEKPYKCDQCDYSAVQKSSLDQHLSKHTGETPYKCDQCDYSAAQKYNLDQHLAK 333
Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C + + + + H+RTHTGEKPY C QC + +A + L HL K
Sbjct: 1 MCGECGHRTASKSRLSLHMRTHTGEKPYKCDQCDYSAAQKSSLDQHLSK 49
Score = 43.1 bits (100), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + + H+RTHTGEKPY C QC + +A L HL K
Sbjct: 56 YMCGECGHRTASKSRLSLHMRTHTGEKPYKCDQCDYSAAQKYNLDKHLAK 105
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 22/32 (68%)
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
H+RTHTGEKPY C QC + +A + L HL K
Sbjct: 382 HMRTHTGEKPYKCDQCDYSAAQKSRLDQHLSK 413
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 148 FVCYACDY-FSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C CDY +Y R + HTGEKPY CG+C +R A + L H+
Sbjct: 504 YKCDQCDYSAAYKSALDRHLVVKHTGEKPYMCGECGYRVAQKSNLSRHV 552
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C + + + H++ HTGEKPY C QC + +A + L HL
Sbjct: 476 FMCEECGFGTARKSVLTLHMKIHTGEKPYKCDQCDYSAAYKSALDRHL 523
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 165 SHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
H+ HTGEKPY CG+C R+AS + L H++
Sbjct: 189 EHLSKHTGEKPYMCGECGHRTASKSRLSLHMR 220
Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 121 LSTNLNELIEHCRTC--KSMIRTDPFRH--------KFVCYACDYFSYNIGCMRSHIRTH 170
LS + E C C ++++++D RH + C CDY + + H R H
Sbjct: 411 LSKHTGEKPYMCDECGYRTVLKSDLSRHLRTHTGDKPYKCDQCDYSAIQKHSLDRHKRNH 470
Query: 171 TGEKPYACGQCAFRSASVAGLHYHLK 196
G+KP+ C +C F +A + L H+K
Sbjct: 471 AGDKPFMCEECGFGTARKSVLTLHMK 496
Score = 39.3 bits (90), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + H+ THTG KPY C QC + +A + L HL K
Sbjct: 533 YMCGECGYRVAQKSNLSRHVATHTGVKPYKCDQCDYSAAQKSTLKIHLAK 582
Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
++C C+Y + + + H+RTHT EKPY C QC +
Sbjct: 589 YMCGECEYRTADRSTLSRHMRTHTVEKPYKCDQCDY 624
Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
++C C + + + + H+RTHTGEKPY C Q A +S
Sbjct: 340 YMCGECGHRTASKSHLSLHMRTHTGEKPYKCDQTASKS 377
>gi|392933933|ref|NP_001255975.1| transcriptional repressor CTCFL isoform 6 [Homo sapiens]
Length = 613
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H +T K+ +F C C Y M +HIRTHTGE
Sbjct: 410 CRYCSAVFHERY-ALIQHQKTHKN-------EKRFKCKHCSYACKQERHMTAHIRTHTGE 461
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KP+ C C FR + H+ + YH
Sbjct: 462 KPFTCLSCNKCFRQKQLLNAHF---RKYH 487
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 324 TSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 383
Query: 190 GLHYHLK 196
L H++
Sbjct: 384 KLKRHMR 390
Score = 37.7 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 130 EHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSAS 187
E ++ K+ +T + F C C + S + H++THT EKP+ C C FR+ +
Sbjct: 239 EKAKSTKNQRKTKGAKGTFHCDVCMFTSSRMSSFNRHMKTHTSEKPHLCHLCLKTFRTVT 298
Query: 188 VAGLH 192
+ H
Sbjct: 299 LLRNH 303
Score = 36.2 bits (82), Expect = 8.1, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 12/81 (14%)
Query: 131 HCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ 180
HC C ++T +C+ C + +R+H+ THTG +PY C
Sbjct: 258 HCDVCMFTSSRMSSFNRHMKTHTSEKPHLCHLCLKTFRTVTLLRNHVNTHTGTRPYKCND 317
Query: 181 C--AFRSASVAGLHYHLKKTY 199
C AF ++ H K T+
Sbjct: 318 CNMAFVTSGELVRHRRYKHTH 338
>gi|260810911|ref|XP_002600166.1| hypothetical protein BRAFLDRAFT_204472 [Branchiostoma floridae]
gi|229285452|gb|EEN56178.1| hypothetical protein BRAFLDRAFT_204472 [Branchiostoma floridae]
Length = 477
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++CY C + + G + H+ HTGEKPY C +C FR+AS + L+ H +K
Sbjct: 231 YICYECGFETSRKGNLDDHMLIHTGEKPYMCKECGFRTASRSHLYVHARK 280
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + + H R HTGEKPY C QC F + + L H +K
Sbjct: 259 YMCKECGFRTASRSHLYVHARKHTGEKPYKCDQCDFSATGKSRLERHKRK 308
Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 148 FVCYACDYFSYNIGCMRSHI-RTHTGEKPYACGQCAFRSASVAGLHYH 194
+ C CDY S +R HI HT EKP+ C +C +R+A + L H
Sbjct: 116 YKCDQCDYSSVERSSLRKHIMAKHTNEKPHVCERCGYRTAQKSALRTH 163
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C Y + + H+R HTGEKPY C QC + S + L H+
Sbjct: 88 FMCGECGYRTNLKHNLVIHMRRHTGEKPYKCDQCDYSSVERSSLRKHI 135
Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 27/51 (52%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ ++VC C + + H+R HTGEKPY C +C F ++ L H+
Sbjct: 200 KKQYVCGECGMTTAYKSSLTLHMRRHTGEKPYICYECGFETSRKGNLDDHM 250
>gi|260823112|ref|XP_002604027.1| hypothetical protein BRAFLDRAFT_57764 [Branchiostoma floridae]
gi|229289352|gb|EEN60038.1| hypothetical protein BRAFLDRAFT_57764 [Branchiostoma floridae]
Length = 481
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C + + M H+RTHTGEKPY CG+C +R+A + L H++
Sbjct: 420 YMCGECGFRTTRKSIMSEHMRTHTGEKPYICGECGYRTADRSTLSRHMR 468
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C CDY + + +H+RTHTGEKPY C QC + +A + L HL K
Sbjct: 299 MRTHTGEKPYRCDQCDYSAAQKSDLSTHMRTHTGEKPYNCDQCDYSAARRSTLDQHLAK 357
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + + H+ H+GEKPY CG+C +R+A L H++K
Sbjct: 84 YKCDQCDYSAAHKWNLEQHVAKHSGEKPYMCGECGYRTAQKCNLSKHMRK 133
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + +H R HTGEKPY CG+C FR+ + + H++
Sbjct: 383 MRTHTGEKPYKCDQCDYSAADRTTLANHQRKHTGEKPYMCGECGFRTTRKSIMSEHMR 440
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y S C+ H++THTGEKPY C C + + + L HL K
Sbjct: 224 YICEKCGYRSARKSCLSQHMKTHTGEKPYKCDLCNYSATRKSNLDQHLAK 273
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + HIR HTG+KPY CG+C ++A + L H++
Sbjct: 28 YKCDQCDYSATEKSTLVKHIRKHTGDKPYICGECGHKTAKKSHLSRHMR 76
Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A L H +K
Sbjct: 364 YMCGECGYRATQKCNLSRHMRTHTGEKPYKCDQCDYSAADRTTLANHQRK 413
Score = 42.7 bits (99), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 136 KSMIRTDPFRH--------KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSAS 187
++ ++D F+H + C CDY + M+ H+ H+ EKPY C +C +RSA
Sbjct: 176 RATQKSDLFKHMRIHTGEKPYKCDQCDYSAAQKSHMQQHVLKHSTEKPYICEKCGYRSAR 235
Query: 188 VAGLHYHLK 196
+ L H+K
Sbjct: 236 KSCLSQHMK 244
Score = 42.4 bits (98), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HTGEKPY C QC + +A L HL K
Sbjct: 112 YMCGECGYRTAQKCNLSKHMRKHTGEKPYKCDQCDYSAAQKGLLDQHLMK 161
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ H GEK Y CG+C +R+ L H++
Sbjct: 327 MRTHTGEKPYNCDQCDYSAARRSTLDQHLAKHNGEKSYMCGECGYRATQKCNLSRHMR 384
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + G + H+ HT ++PY CG+C R+ + L H++
Sbjct: 140 YKCDQCDYSAAQKGLLDQHLMKHTDKRPYMCGECGHRATQKSDLFKHMR 188
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H+R HTGEKPY C QC + +A L H+ K
Sbjct: 56 YICGECGHKTAKKSHLSRHMRIHTGEKPYKCDQCDYSAAHKWNLEQHVAK 105
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C + + + H+RTHTGEKPY C QC + +A + L H++
Sbjct: 280 YMCDKCGFRTVLKCSLSRHMRTHTGEKPYRCDQCDYSAAQKSDLSTHMR 328
Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C Y + + H+R HTGEKPY C QC + + + L H++K
Sbjct: 1 MCGECGYRTVERSTLSRHMRIHTGEKPYKCDQCDYSATEKSTLVKHIRK 49
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C + + + H+R HTGEKPY C QC + +A + + H+
Sbjct: 168 YMCGECGHRATQKSDLFKHMRIHTGEKPYKCDQCDYSAAQKSHMQQHV 215
>gi|432948446|ref|XP_004084049.1| PREDICTED: transcription factor HIVEP2-like [Oryzias latipes]
Length = 2093
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C+ C ++ HIR+HTGE+PY C C F + + L+ H K H
Sbjct: 135 KYICHYCGRACAKPSVLKKHIRSHTGERPYPCEPCGFSFKTKSNLYKHRKSHAH 188
Score = 44.7 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1525 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYVCKFCNFAFKTKGNLTKHMKSKAH 1580
>gi|260795687|ref|XP_002592836.1| hypothetical protein BRAFLDRAFT_65421 [Branchiostoma floridae]
gi|229278060|gb|EEN48847.1| hypothetical protein BRAFLDRAFT_65421 [Branchiostoma floridae]
Length = 945
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C Q SH++ L ++M + C C S +L L H R S
Sbjct: 258 CEQCSRQFSHMENLK-----THMRTHTGEKPYE--CEECSRQFS-DLGNLKTHMR---SH 306
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C C +G ++ HIRTHTGEKPY C +C+ + + + L H++
Sbjct: 307 TGEKPYR----CEECSRQFNELGSLKKHIRTHTGEKPYRCEECSRQFSELGNLKKHMR 360
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 49/118 (41%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C C Q S LD L S+M + C C S L +H
Sbjct: 806 CDECSKQFSRLDTLK-----SHMRTHTGEKPYQ--CEECSRQFS-ELGSFKKH------- 850
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IRT + C C +G ++ HIRTHTGEKPY C QC+ + + + L H++
Sbjct: 851 IRTHTGEKPYRCEECSRQFSELGTLKRHIRTHTGEKPYMCEQCSRQFSELCALKTHMR 908
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 19/131 (14%)
Query: 68 VTTIPTQNHSLCKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNL 125
V ++ + C+ C Q SHL D H +T + P+ C C S L
Sbjct: 23 VGSVRKEKPYKCEECSKQFSHLGDFKKHMRT---------HTGEKPYKCEECSRQFS-QL 72
Query: 126 NELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
LI+H +RT + C C +G ++ H+RTHTGEKPY C +C+ +
Sbjct: 73 GSLIKH-------MRTHTGEKPYKCEECSRQFNQLGHLKRHMRTHTGEKPYKCEECSKQF 125
Query: 186 ASVAGLHYHLK 196
+ + L H++
Sbjct: 126 SVLGVLKSHMR 136
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 17/120 (14%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
+C+ C Q S L L+ IR + P+ C C S L+ L K
Sbjct: 777 MCEECSRQFSQLGALN------THIRTHTGE--KPYRCDECSKQFS-RLDTL-------K 820
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
S +RT + C C +G + HIRTHTGEKPY C +C+ + + + L H++
Sbjct: 821 SHMRTHTGEKPYQCEECSRQFSELGSFKKHIRTHTGEKPYRCEECSRQFSELGTLKRHIR 880
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT ++C C +G ++SH+ THTGEKPY CG+C+ + + ++ L H++
Sbjct: 191 MRTHTGEKPYMCEKCSRQFSQLGALKSHMLTHTGEKPYQCGECSRQFSELSNLERHMR 248
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C Q S LD L ++M + C C S ++L T K+
Sbjct: 582 CEECSRQFSQLDSLK-----THMRTHTGEKPYR--CEEC----SRQFSQLA----TLKTH 626
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C +G +++H+RTHTGEKPY C +C+ + + + L H++
Sbjct: 627 MRTHTGEKPYRCEECSRQFSVLGALKTHMRTHTGEKPYRCEECSRQFSELGALEIHMR 684
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 56/140 (40%), Gaps = 31/140 (22%)
Query: 79 CKHCHSQLSHLDLLD------------HCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLN 126
C+ C+ Q S LD L C+ CS FS + K + T+
Sbjct: 442 CEECNKQFSRLDNLKTHVRTHTGEKPYRCEECS--------RQFSQL-GHLKEHMRTHTG 492
Query: 127 ELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY 176
E C C K +RT + C C G ++SH+RTHTGEKPY
Sbjct: 493 EKPYRCEECSRQFSQPSDLKKHMRTHTGEKPYKCEECSKQFSQPGDLKSHMRTHTGEKPY 552
Query: 177 ACGQCAFRSASVAGLHYHLK 196
C +C+ + + + L HL+
Sbjct: 553 RCEECSKQFSRLDSLKKHLR 572
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CD +G ++ H+RTHTGEKPY C +C + + + L H++
Sbjct: 683 MRTHTGEKPYRCEECDRQFSRLGALKKHMRTHTGEKPYRCEECDRQFSRLDSLKKHMR 740
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 9/93 (9%)
Query: 105 NANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCM 163
+N P+ C C S L+ L H RT P+R C C +G +
Sbjct: 432 GSNKEEKPYRCEECNKQFS-RLDNLKTHVRT---HTGEKPYR----CEECSRQFSQLGHL 483
Query: 164 RSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ H+RTHTGEKPY C +C+ + + + L H++
Sbjct: 484 KEHMRTHTGEKPYRCEECSRQFSQPSDLKKHMR 516
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 51/119 (42%), Gaps = 17/119 (14%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKS 137
C+ C Q S L L+ I + P+ C C S L L +H RT
Sbjct: 666 CEECSRQFSELGALE--------IHMRTHTGEKPYRCEECDRQFS-RLGALKKHMRT--- 713
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C CD + ++ H+RTHTGEKPY C +C + + + L H++
Sbjct: 714 HTGEKPYR----CEECDRQFSRLDSLKKHMRTHTGEKPYRCEECDRQFSRLDSLKKHMR 768
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 19/120 (15%)
Query: 79 CKHCHSQLSH-LDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
C+ C Q S DL H +T + P+ C C S L+ L +H RT K
Sbjct: 526 CEECSKQFSQPGDLKSHMRT---------HTGEKPYRCEECSKQFS-RLDSLKKHLRTHK 575
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P++ C C + +++H+RTHTGEKPY C +C+ + + +A L H++
Sbjct: 576 G---EKPYK----CEECSRQFSQLDSLKTHMRTHTGEKPYRCEECSRQFSQLATLKTHMR 628
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 56/139 (40%), Gaps = 27/139 (19%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLS----------TNLNE 127
+C+ C Q S L L S+M+ + C C S T+ E
Sbjct: 201 MCEKCSRQFSQLGALK-----SHMLTHTGEKPYQ--CGECSRQFSELSNLERHMRTHTGE 253
Query: 128 LIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA 177
C C K+ +RT + C C ++G +++H+R+HTGEKPY
Sbjct: 254 KPYRCEQCSRQFSHMENLKTHMRTHTGEKPYECEECSRQFSDLGNLKTHMRSHTGEKPYR 313
Query: 178 CGQCAFRSASVAGLHYHLK 196
C +C+ + + L H++
Sbjct: 314 CEECSRQFNELGSLKKHIR 332
Score = 42.7 bits (99), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C Q S L L +M + C C S L+ L +H RT
Sbjct: 694 CEECDRQFSRLGALK-----KHMRTHTGEKPYR--CEECDRQFS-RLDSLKKHMRT---H 742
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C CD + ++ H+RTHTGEK Y C +C+ + + + L+ H++
Sbjct: 743 TGEKPYR----CEECDRQFSRLDSLKKHMRTHTGEKRYMCEECSRQFSQLGALNTHIR 796
>gi|260795685|ref|XP_002592835.1| hypothetical protein BRAFLDRAFT_65420 [Branchiostoma floridae]
gi|229278059|gb|EEN48846.1| hypothetical protein BRAFLDRAFT_65420 [Branchiostoma floridae]
Length = 453
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C C S LN L +H RT P+R C C +G M++H+RTHTGE
Sbjct: 370 CEKCTKQFS-RLNSLKKHLRT---HTGEKPYR----CEECSRQFSELGAMKTHMRTHTGE 421
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
KPY C +C+ + + + L H++
Sbjct: 422 KPYKCEECSRQFSQLGNLKTHMR 444
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 57/139 (41%), Gaps = 29/139 (20%)
Query: 79 CKHCHSQLSHLDLLD------------HCKTCSYMIRP--------NANNTFSPF-CIYC 117
C+ C Q S L L C+ CS R + P+ C C
Sbjct: 230 CEECTKQFSQLSYLKTHMRTHTGEKPYRCEACSRQFRELDALKRHMRTHTGEKPYKCEEC 289
Query: 118 KAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA 177
ST NEL K+ +RT + C C +G +++H+RTHTGEKPY
Sbjct: 290 ----STQFNELG----NLKTHMRTHTGEKPYRCDECSRQFNELGTLKTHMRTHTGEKPYK 341
Query: 178 CGQCAFRSASVAGLHYHLK 196
C +C+ + + + L H++
Sbjct: 342 CEECSRQFSQLGNLKTHMR 360
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IRT + C C ++G +++H+RTHTGEK Y C +C+ R + + L H+
Sbjct: 48 KKHIRTHTGEKPYKCEECSKHFSHLGNLKAHMRTHTGEKSYKCEECSKRFSQLGNLKTHM 107
Query: 196 K 196
+
Sbjct: 108 R 108
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 19/144 (13%)
Query: 53 MSLDQILNLNLSVLLVTTIPTQNHSLCKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFS 111
SL + V ++ + C+ C+ Q S L DL H +T +
Sbjct: 8 QSLGNVRRKAKRDSSVRSVREEKRFRCEECNKQFSQLSDLKKHIRT---------HTGEK 58
Query: 112 PF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
P+ C C S +L L H +RT + C C +G +++H+RTH
Sbjct: 59 PYKCEECSKHFS-HLGNLKAH-------MRTHTGEKSYKCEECSKRFSQLGNLKTHMRTH 110
Query: 171 TGEKPYACGQCAFRSASVAGLHYH 194
TGEKPY C +C + + L H
Sbjct: 111 TGEKPYKCDKCNRQFNGLGNLKTH 134
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
S +R+ +F C C+ + ++ HIRTHTGEKPY C +C+ + + L H++
Sbjct: 21 SSVRSVREEKRFRCEECNKQFSQLSDLKKHIRTHTGEKPYKCEECSKHFSHLGNLKAHMR 80
Score = 43.1 bits (100), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+ C C +G ++SH+RTHTGEKPY C +C+ + + + L H
Sbjct: 144 YRCEECSRQFSQLGHLKSHMRTHTGEKPYKCKECSRQFSELRNLKTH 190
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
KS +RT + C C + +++H +THTGEKPY C +C+ + + + L H+
Sbjct: 160 KSHMRTHTGEKPYKCKECSRQFSELRNLKTHRQTHTGEKPYKCEECSGKFSQLGDLKKHM 219
Query: 196 K 196
+
Sbjct: 220 R 220
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 122 STNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
S NEL T K+ +RT + C C +G +++H+RTH GE PY C +C
Sbjct: 318 SRQFNELG----TLKTHMRTHTGEKPYKCEECSRQFSQLGNLKTHMRTHKGEMPYKCEKC 373
Query: 182 AFRSASVAGLHYHLK 196
+ + + L HL+
Sbjct: 374 TKQFSRLNSLKKHLR 388
Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C Q S L L S+M + C C S +EL R K+
Sbjct: 146 CEECSRQFSQLGHLK-----SHMRTHTGEKPYK--CKEC----SRQFSEL----RNLKTH 190
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+T + C C +G ++ H+RTHTGEKP+ C +C + + ++ L H++
Sbjct: 191 RQTHTGEKPYKCEECSGKFSQLGDLKKHMRTHTGEKPHKCEECTKQFSQLSYLKTHMR 248
Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 49/119 (41%), Gaps = 17/119 (14%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKS 137
CK C Q S L L + P+ C C S L +L +H RT
Sbjct: 174 CKECSRQFSELRNLK--------THRQTHTGEKPYKCEECSGKFS-QLGDLKKHMRT--- 221
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
T HK C C + +++H+RTHTGEKPY C C+ + + L H++
Sbjct: 222 --HTGEKPHK--CEECTKQFSQLSYLKTHMRTHTGEKPYRCEACSRQFRELDALKRHMR 276
>gi|260798723|ref|XP_002594349.1| hypothetical protein BRAFLDRAFT_72239 [Branchiostoma floridae]
gi|229279583|gb|EEN50360.1| hypothetical protein BRAFLDRAFT_72239 [Branchiostoma floridae]
Length = 472
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++T +C C Y + + H+RTHTGEKPY CG+C FR+ A L +H++
Sbjct: 263 MKTHTGEKPLMCDQCGYRTAKKSHLAQHMRTHTGEKPYMCGECGFRTTMRANLSFHMR 320
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + H+ THTG+KPY CG+C +R+A + ++ H++
Sbjct: 92 MRTHTGEKPYKCDQCDYSAGSKFALNQHVSTHTGDKPYMCGECGYRAAQTSHINRHMR 149
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RT + C CDY + + SH+ HTGEKP+ CGQC +R+A + L H++
Sbjct: 36 TRTHTGEKPYKCDQCDYSAALKSSLDSHVLKHTGEKPFMCGQCGYRAAHKSNLSKHMR 93
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C Y + + + H+RTHTGEKPY C QC + + S L+ H+
Sbjct: 73 FMCGQCGYRAAHKSNLSKHMRTHTGEKPYKCDQCDYSAGSKFALNQHV 120
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CDY + + SH+ HTG+KPY CG C +R+ + L H+K
Sbjct: 157 FKCEHCDYSAAQKSVLNSHLAKHTGDKPYMCGVCGYRATRKSHLSDHMK 205
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 112 PF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
PF C C + + + L H RT I P+ +C C Y + + H++TH
Sbjct: 212 PFLCEVC-GYKTAHKSHLTVHMRTHTGNITERPY----MCGECGYRAKQKSHLSDHMKTH 266
Query: 171 TGEKPYACGQCAFRSASVAGLHYHLK 196
TGEKP C QC +R+A + L H++
Sbjct: 267 TGEKPLMCDQCGYRTAKKSHLAQHMR 292
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
KF C C Y + + H+RTHTGEKPY C +C + +A + L H
Sbjct: 332 KFKCDECGYRAARQLHLSQHMRTHTGEKPYKCDECDYSAALKSSLDSH 379
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSH-IRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + SH + HTGEKP+ CG+C +R+A L H++
Sbjct: 352 MRTHTGEKPYKCDECDYSAALKSSLDSHRLLKHTGEKPFMCGECGYRTAYKPALSKHMR 410
Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HTG++P+ C C + +A + L+ HL K
Sbjct: 129 YMCGECGYRAAQTSHINRHMRIHTGQRPFKCEHCDYSAAQKSVLNSHLAK 178
Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 151 YACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ CDY + + H+ HTGEKP+ C +C +RS + L H++
Sbjct: 418 FKCDYSAAKKCTLDIHVLKHTGEKPFMCEECGYRSTQKSTLSQHMR 463
Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
H RTHTGEKPY C QC + +A + L H+
Sbjct: 35 HTRTHTGEKPYKCDQCDYSAALKSSLDSHV 64
Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+++HTGEKP+ C C +++A + L H++
Sbjct: 185 YMCGVCGYRATRKSHLSDHMKSHTGEKPFLCEVCGYKTAHKSHLTVHMR 233
>gi|260815008|ref|XP_002602205.1| hypothetical protein BRAFLDRAFT_216782 [Branchiostoma floridae]
gi|229287512|gb|EEN58217.1| hypothetical protein BRAFLDRAFT_216782 [Branchiostoma floridae]
Length = 629
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 17/100 (17%)
Query: 114 CIYCKAVLSTNLNELIEH-------CRTC--KSMIRTDPFRHK--------FVCYACDYF 156
C Y AV ST +H C C ++ R+D +H + C CDY
Sbjct: 383 CDYSAAVKSTLAKHQAKHTGQKPYMCEKCGYRTARRSDLSQHMRTHTGDKCYKCDQCDYS 442
Query: 157 SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ + HIR HTGEKPY CG+C R+A L H++
Sbjct: 443 ATEKSTLIKHIRKHTGEKPYMCGECGHRTADKGNLSRHMR 482
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + HI HTGEKPY CG+C +R+A L H++
Sbjct: 481 MRTHTGEKPYKCDQCDYAAARRFNLDQHITKHTGEKPYMCGECGYRTAQRQHLSRHMR 538
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 122 STNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
+T + LI+H IR ++C C + + + G + H+RTHTGEKPY C QC
Sbjct: 443 ATEKSTLIKH-------IRKHTGEKPYMCGECGHRTADKGNLSRHMRTHTGEKPYKCDQC 495
Query: 182 AFRSASVAGLHYHLKK 197
+ +A L H+ K
Sbjct: 496 DYAAARRFNLDQHITK 511
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAG 190
+RT + C CDY + + H+R HTG+KPY CG+C +R+A G
Sbjct: 228 MRTHTGEKPYKCDQCDYSASVKSSLDHHLRIHTGDKPYMCGECGYRTAKNRG 279
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H RTHTGEKP+ C QCAF +A + H++K
Sbjct: 574 YMCGECGYRAAKRSTLSKHTRTHTGEKPFKCDQCAFSTAQKFSFNRHVRK 623
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 137 SMIRTDPFRH--------KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASV 188
S++R+D RH + C CDY + + H++ HTGEKP+ CG C +R+ +
Sbjct: 303 SVLRSDLSRHMRTHTGEKPYKCEECDYSAAEKSKLDLHMKKHTGEKPFMCGDCGYRTTTK 362
Query: 189 AGLHYHLK 196
+ L H++
Sbjct: 363 STLSRHMR 370
Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C Y S + H+RTHTGEKPY C +C + +A + L H+KK
Sbjct: 295 MCGECGYSSVLRSDLSRHMRTHTGEKPYKCEECDYSAAEKSKLDLHMKK 343
Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C Y + + H+RTHTGEKPY C QC + ++ + L +HL+
Sbjct: 209 YNCGDCGYKAARKSELSRHMRTHTGEKPYKCDQCDYSASVKSSLDHHLR 257
Score = 43.5 bits (101), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+F+C C Y + + + H+RTHTGEKP+ C QC + ++ L HL K
Sbjct: 96 RFMCEKCGYRTAHKTHLSRHLRTHTGEKPHRCDQCDYSASEKRSLDIHLAK 146
Score = 43.1 bits (100), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H++THTGEKPY C QC + + + + LH H K
Sbjct: 153 YMCEKCGYRTAEKSYLFVHLKTHTGEKPYKCDQCDYSAVTKSNLHQHQSK 202
Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + +F+C C Y + + H HT E+PY CG+C +R+A + L H +
Sbjct: 537 MRTHTGKRRFMCNLCGYSTSQKHHLIDHQTKHTAERPYMCGECGYRAAKRSTLSKHTR 594
Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + H+R HTGE+PY C QC + +A + L H K
Sbjct: 350 FMCGDCGYRTTTKSTLSRHMRIHTGERPYKCDQCDYSAAVKSTLAKHQAK 399
Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H HTG+KPY C +C +R+A + L H++
Sbjct: 378 YKCDQCDYSAAVKSTLAKHQAKHTGQKPYMCEKCGYRTARRSDLSQHMR 426
Score = 39.7 bits (91), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C+Y + + + H HTGEKPY CG+C +R+ + + H++
Sbjct: 8 YKCDQCNYSAADKTNLDIHQAKHTGEKPYMCGECGYRAGNKCDVSRHMR 56
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
++C C Y + N + H+RTHTGEKPY C C + +A
Sbjct: 36 YMCGECGYRAGNKCDVSRHMRTHTGEKPYKCDLCDYSAA 74
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT C CDY + + H+ H G+KPY C +C +R+A + L HLK
Sbjct: 116 LRTHTGEKPHRCDQCDYSASEKRSLDIHLAKHNGDKPYMCEKCGYRTAEKSYLFVHLK 173
Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 148 FVCYACDYF-SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + N G M H+ +TG+KP+ CG+C + S + L H++
Sbjct: 265 YMCGECGYRTAKNRGSMGRHVVKNTGKKPHMCGECGYSSVLRSDLSRHMR 314
>gi|260813382|ref|XP_002601397.1| hypothetical protein BRAFLDRAFT_243962 [Branchiostoma floridae]
gi|229286692|gb|EEN57409.1| hypothetical protein BRAFLDRAFT_243962 [Branchiostoma floridae]
Length = 410
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C CDY + + H+R HTGEKPY CG+C +R+A + L
Sbjct: 234 MRTHTGEKPYKCDQCDYSAAQKSTLDQHLRKHTGEKPYMCGECGYRAARKSDL 286
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
C C + P++ C CDY + + + H+R HTGEKPY CG+C +R+A L
Sbjct: 62 CGDCGTHTGEKPYK----CDQCDYSAAHKSHLTRHLRKHTGEKPYMCGECGYRTAQRCTL 117
Query: 192 HYHLK 196
H+K
Sbjct: 118 SLHMK 122
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+RTHTGEKPY C QC + +A + L HL+K
Sbjct: 215 YMCGECGYRAVHKSDLSKHMRTHTGEKPYKCDQCDYSAAQKSTLDQHLRK 264
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C+Y + + + H+R HTGEKPY CG+C FR+ L H++
Sbjct: 130 YKCDQCEYAAAHKSNLDKHLRKHTGEKPYMCGECGFRTTHKESLSRHMR 178
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H HTGEKPY CG+C +R+ + L H +
Sbjct: 299 YKCDQCDYSAARRSALEKHQTKHTGEKPYMCGECGYRTTKKSNLSRHTR 347
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H++THTGEKPY C QC + +A + L HL+K
Sbjct: 102 YMCGECGYRTAQRCTLSLHMKTHTGEKPYKCDQCEYAAAHKSNLDKHLRK 151
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H RTHTGEKPY C QC + +A + L H++
Sbjct: 327 YMCGECGYRTTKKSNLSRHTRTHTGEKPYKCDQCDYSAARKSTLSRHMR 375
Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
RT + C CDY + + H+R HTGEKPY C QC + + + L H++K
Sbjct: 346 TRTHTGEKPYKCDQCDYSAARKSTLSRHMRIHTGEKPYKCDQCDYSATEKSTLVKHIRK 404
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSH-IRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + +H + H+GEKPY CG+C +R+ + L H++
Sbjct: 177 MRTHTGEKPYKCDQCDYSAARKSTLDNHTVAKHSGEKPYMCGECGYRAVHKSDLSKHMR 235
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C + + + + H+RTHTGEKPY C QC + +A + L H
Sbjct: 158 YMCGECGFRTTHKESLSRHMRTHTGEKPYKCDQCDYSAARKSTLDNH 204
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H++THTGEKPY C QC + A + L H +K
Sbjct: 4 YMCEECGYRTIRKYTLSLHMKTHTGEKPYKCDQCDYSFAEKSKLGRHRRK 53
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 18/35 (51%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
+ C CDY + H R HTGEKPY CG C
Sbjct: 32 YKCDQCDYSFAEKSKLGRHRRKHTGEKPYMCGDCG 66
Score = 35.8 bits (81), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + +R HTGE+PY C QC + +A + L H K
Sbjct: 271 YMCGECGYRAARKSDLIQLMRIHTGERPYKCDQCDYSAARRSALEKHQTK 320
>gi|391343769|ref|XP_003746178.1| PREDICTED: B-cell lymphoma/leukemia 11B-like [Metaseiulus
occidentalis]
Length = 153
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+FVC C Y + N+ + H RTHTGE+PY C QC +++ ++ L+ H +
Sbjct: 85 RFVCDQCHYETNNLQHYKIHQRTHTGERPYKCSQCVYKATQLSSLYRHQR 134
>gi|260802021|ref|XP_002595892.1| hypothetical protein BRAFLDRAFT_232236 [Branchiostoma floridae]
gi|229281143|gb|EEN51904.1| hypothetical protein BRAFLDRAFT_232236 [Branchiostoma floridae]
Length = 561
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + G + H+ HTGEKPY CG C +R+A A L HL+K
Sbjct: 179 YKCDQCDYSAVRKGNLDKHLANHTGEKPYKCGVCGYRTAYKAHLLRHLRK 228
Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C+Y + + +H+ HTGEKP+ CG+C +R+A L H+KK
Sbjct: 10 YKCDQCNYSTVWKRYLDTHLANHTGEKPFMCGECGYRTAYRTNLSRHMKK 59
Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + H+ HTGEKPY CG C +R+A A L H+ K
Sbjct: 319 YKCDQCDYSAVRKIYLDKHLANHTGEKPYKCGVCGYRTAYKAHLLRHMSK 368
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
FVC C Y + + + H++ H+GE PY C C F ++ + L H+ K
Sbjct: 263 FVCELCGYGTESKAHLSRHMKKHSGENPYCCDHCDFSTSWKSSLDQHMAK 312
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 148 FVCYACDYF-SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C CD+ S+ I R H+ HTGEKPY C QC + + + L HL
Sbjct: 66 YRCKQCDFSTSWQINLQR-HMAQHTGEKPYKCDQCDYSAIQKSNLDKHL 113
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++ C CD+ + + ++ H H+ EK Y CG+C FR+A L H++K
Sbjct: 446 RYRCDRCDFSTCSKSNLKQHQGKHSVEKSYLCGECGFRTAFRPSLSRHMRK 496
Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
F+C C Y + + + H+R HTGEKPY C C F ++ L H
Sbjct: 122 FMCELCGYGTAHKTHLARHMRKHTGEKPYCCDHCDFSTSWKVTLDQH 168
Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + H+ HTGEKP+ C C + +A L H++K
Sbjct: 94 YKCDQCDYSAIQKSNLDKHLVKHTGEKPFMCELCGYGTAHKTHLARHMRK 143
Score = 36.2 bits (82), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C CD+ + + H+ HTGEKPY C QC + + L HL
Sbjct: 291 YCCDHCDFSTSWKSSLDQHMAKHTGEKPYKCDQCDYSAVRKIYLDKHL 338
>gi|260781007|ref|XP_002585620.1| hypothetical protein BRAFLDRAFT_63004 [Branchiostoma floridae]
gi|229270638|gb|EEN41631.1| hypothetical protein BRAFLDRAFT_63004 [Branchiostoma floridae]
Length = 310
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 62/145 (42%), Gaps = 22/145 (15%)
Query: 54 SLDQILNLNLSVLLVTTIPTQNHSLCKHCHSQLSHLD--LLDHCKTCSYMIRPNANNTFS 111
S Q +L+L + T C + +Q SHLD +L H YM
Sbjct: 36 SAAQKSHLDLHLAKHTGQKPYKCHECDYSSAQKSHLDRHVLKHTGEKPYM---------- 85
Query: 112 PFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHT 171
C C +T ++L++H +RT + C CDY + + H+ HT
Sbjct: 86 --CGEC-GYRTTQKSDLLKH-------MRTHTGEKPYKCDQCDYSAAQQSTLDRHLANHT 135
Query: 172 GEKPYACGQCAFRSASVAGLHYHLK 196
G+KPY CG+C +R+ GL HL+
Sbjct: 136 GDKPYMCGECGYRTRHRQGLVRHLR 160
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HTGEKPY C QC + +A GL HL K
Sbjct: 196 YICGECGYRTARKSDLSRHMRGHTGEKPYKCDQCDYSAAQKCGLVQHLAK 245
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKPY CG+C +R+A L H+K
Sbjct: 224 YKCDQCDYSAAQKCGLVQHLAKHTGEKPYMCGECGYRAARKFTLSEHMK 272
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H++THTGEKPY C QC + +A + HL K
Sbjct: 252 YMCGECGYRAARKFTLSEHMKTHTGEKPYKCDQCDYSAAHKSSFDIHLAK 301
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C Y + + H+RTHTGEKPY C QC + +A + L HL K
Sbjct: 1 MCGECGYRADRKFYLSIHMRTHTGEKPYKCDQCDYSAAQKSHLDLHLAK 49
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + C CDY + + H+ HTG+KPY C +C + SA + L H+
Sbjct: 19 MRTHTGEKPYKCDQCDYSAAQKSHLDLHLAKHTGQKPYKCHECDYSSAQKSHLDRHV 75
>gi|395752479|ref|XP_002830504.2| PREDICTED: transcriptional repressor CTCFL isoform 2 [Pongo abelii]
Length = 662
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H +T K+ +F C C Y M +HIRTHTGE
Sbjct: 460 CRYCSAVFHERY-ALIQHQKTHKN-------EKRFKCKHCSYACKQERHMTAHIRTHTGE 511
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KP+ C C FR + H+ + YH
Sbjct: 512 KPFTCLSCNKCFRQKQLLNAHF---RKYH 537
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 324 TSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 383
Query: 190 GLHYHLK 196
L H++
Sbjct: 384 KLKRHMR 390
Score = 44.3 bits (103), Expect = 0.031, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +R+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 358 KRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEKPYECHICHTRFTQSGTMKIHI 417
Score = 36.6 bits (83), Expect = 5.6, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 130 EHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSAS 187
E ++ K+ +T + F C C + S + H++TH EKP+ C C FR+ +
Sbjct: 239 EKAKSTKNQRKTKGAKRTFHCDVCMFTSSRMSSFNRHMKTHANEKPHLCHLCLKTFRTVT 298
Query: 188 VAGLH 192
+ H
Sbjct: 299 LLRNH 303
Score = 36.2 bits (82), Expect = 8.7, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKTY 199
+C+ C + +R+H+ THTG +PY C C AF ++ H K T+
Sbjct: 286 LCHLCLKTFRTVTLLRNHVNTHTGTRPYKCNDCNMAFVTSGELVRHRRYKHTH 338
>gi|297707422|ref|XP_002830505.1| PREDICTED: transcriptional repressor CTCFL isoform 3 [Pongo abelii]
gi|395752477|ref|XP_003779430.1| PREDICTED: transcriptional repressor CTCFL [Pongo abelii]
Length = 663
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H +T K+ +F C C Y M +HIRTHTGE
Sbjct: 460 CRYCSAVFHERY-ALIQHQKTHKN-------EKRFKCKHCSYACKQERHMTAHIRTHTGE 511
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KP+ C C FR + H+ + YH
Sbjct: 512 KPFTCLSCNKCFRQKQLLNAHF---RKYH 537
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 324 TSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 383
Query: 190 GLHYHLK 196
L H++
Sbjct: 384 KLKRHMR 390
Score = 44.3 bits (103), Expect = 0.031, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +R+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 358 KRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEKPYECHICHTRFTQSGTMKIHI 417
Score = 36.6 bits (83), Expect = 5.7, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 130 EHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSAS 187
E ++ K+ +T + F C C + S + H++TH EKP+ C C FR+ +
Sbjct: 239 EKAKSTKNQRKTKGAKRTFHCDVCMFTSSRMSSFNRHMKTHANEKPHLCHLCLKTFRTVT 298
Query: 188 VAGLH 192
+ H
Sbjct: 299 LLRNH 303
Score = 35.8 bits (81), Expect = 8.8, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKTY 199
+C+ C + +R+H+ THTG +PY C C AF ++ H K T+
Sbjct: 286 LCHLCLKTFRTVTLLRNHVNTHTGTRPYKCNDCNMAFVTSGELVRHRRYKHTH 338
>gi|260804271|ref|XP_002597012.1| hypothetical protein BRAFLDRAFT_76505 [Branchiostoma floridae]
gi|229282273|gb|EEN53024.1| hypothetical protein BRAFLDRAFT_76505 [Branchiostoma floridae]
Length = 565
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 99 SYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFS 157
S +I P AN+ P+ C C + + L +H +RT + C CDY +
Sbjct: 227 SLVIEPEANSGEKPYMCGEC-GYRTAKKSHLSDH-------MRTHTGEKPYKCNQCDYSA 278
Query: 158 YNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ H+ HTG+KPY CG+C +R+A + L H++
Sbjct: 279 AKKSHVDYHLAKHTGDKPYMCGKCEYRTAHKSHLSRHMR 317
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 13/82 (15%)
Query: 118 KAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDY---FSYNIGCMRSHIRTHTGEK 174
K ++T ++L EH +RT R + C CDY YN+G H+ HTG+K
Sbjct: 26 KPDMTTQKSDLSEH-------MRTHTGRKPYKCNQCDYSAAHKYNLG---RHLAKHTGDK 75
Query: 175 PYACGQCAFRSASVAGLHYHLK 196
PY CG+C +R+ + L H++
Sbjct: 76 PYMCGECGYRTVQKSHLFDHMR 97
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A + + YHL K
Sbjct: 241 YMCGECGYRTAKKSHLSDHMRTHTGEKPYKCNQCDYSAAKKSHVDYHLAK 290
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGEKPY C QC + +A + L+ HL
Sbjct: 409 YMCEECGYRAAQKSHLSRHMRTHTGEKPYKCDQCDYSAAQTSTLNQHL 456
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + H+ THT +KPY CG+C FR+A + L H+++
Sbjct: 105 YKCDQCDYSASKKSILDYHLATHTDDKPYMCGECGFRTARRSALSRHMRR 154
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + C CDY + + H+ HTGEKPY CG+C +R+ + L H+
Sbjct: 428 MRTHTGEKPYKCDQCDYSAAQTSTLNQHLVMHTGEKPYMCGECGYRTYRKSHLSEHM 484
Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CDY + + H+ HTGEKPY C +C +R+A + L H++
Sbjct: 381 FKCEQCDYSAARKYHLDRHLAKHTGEKPYMCEECGYRAAQKSHLSRHMR 429
Score = 42.7 bits (99), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y +Y + H+ THTG KPY C QC + SA+ L H+ K
Sbjct: 465 YMCGECGYRTYRKSHLSEHMSTHTGYKPYTCDQCDYSSATKFNLDRHVSK 514
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
+RT + + C CDY + + + H HTG KPY CG+C +R+A
Sbjct: 316 MRTHTRQKPYKCEKCDYSAASKYQLDQHQAKHTGYKPYMCGECGYRTA 363
Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HT +KPY CG+C +R+A L H+K
Sbjct: 161 YKCDQCDYCASRKSTLDQHLAIHTDDKPYMCGKCGYRTARKFDLVRHMK 209
Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C + + + H+R HTGEKPY C QC + ++ + L HL
Sbjct: 133 YMCGECGFRTARRSALSRHMRRHTGEKPYKCDQCDYCASRKSTLDQHL 180
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASV 188
+++C+ C + + HIRTHTG+KPY C QC + +V
Sbjct: 520 QYMCWECGSRTILKSALSRHIRTHTGDKPYMCDQCDYYENAV 561
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 20/33 (60%)
Query: 165 SHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
H+RTHTG KPY C QC + +A L HL K
Sbjct: 38 EHMRTHTGRKPYKCNQCDYSAAHKYNLGRHLAK 70
>gi|432110181|gb|ELK33957.1| Transcriptional repressor CTCFL [Myotis davidii]
Length = 642
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T +IR +RH F C C+Y S ++ HIR+HTGE+PY C C++ S
Sbjct: 318 TSGELIRHRRYRHTHEKPFKCSTCNYASVEASKLKRHIRSHTGERPYQCDLCSYASKDTH 377
Query: 190 GLHYHLK 196
L H++
Sbjct: 378 KLKRHMR 384
Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
K IR+ + C C Y S + ++ H+RTH+GEKPY C C
Sbjct: 352 KRHIRSHTGERPYQCDLCSYASKDTHKLKRHMRTHSGEKPYECHVC 397
>gi|260822994|ref|XP_002603968.1| hypothetical protein BRAFLDRAFT_71744 [Branchiostoma floridae]
gi|229289293|gb|EEN59979.1| hypothetical protein BRAFLDRAFT_71744 [Branchiostoma floridae]
Length = 574
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IRT + C CDY + + H HTGEKPY CG+C +R+A + L H++
Sbjct: 315 IRTHTGERPYKCDQCDYSAAQKSTLEEHQAKHTGEKPYMCGECGYRTAKRSTLSRHIR 372
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + H R H+GE+PY CG+C +R+A + L H++
Sbjct: 483 MRTHTGEKPYKCDECDYSASHKHHLIDHQRRHSGERPYICGECGYRAAKKSTLSQHMR 540
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + + H+ H GEKPY CG C +R+A + L H++
Sbjct: 212 YKCDQCDYSAADKSTLEQHVAKHNGEKPYMCGDCGYRTAYRSHLSRHIR 260
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IRT ++ C CDY + + H HTG+KPY CG+C +R+A + L ++K
Sbjct: 371 IRTHTGERRYKCGQCDYSAARRQYLIDHQTRHTGKKPYMCGECGYRAAQRSTLSQNMK 428
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + HIRTHTGE+PY C QC + +A + L H K
Sbjct: 296 YICGVCGHRANQKSDLSRHIRTHTGERPYKCDQCDYSAAQKSTLEEHQAK 345
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + HIR HTGE+PY C QC + +A + L H+ K
Sbjct: 240 YMCGDCGYRTAYRSHLSRHIRIHTGERPYKCDQCGYSAAHKSTLEQHVAK 289
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HTGE+PY C QC + +A + L H+ K
Sbjct: 184 YMCVECGYRTDKKSHLSRHMRIHTGERPYKCDQCDYSAADKSTLEQHVAK 233
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
++C C Y + + HIRTHTGE+ Y CGQC + +A
Sbjct: 352 YMCGECGYRTAKRSTLSRHIRTHTGERRYKCGQCDYSAA 390
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
F+C C Y + + H+RTHTGEKPY C +C + ++
Sbjct: 464 FICEECGYRAARKPVLSRHMRTHTGEKPYKCDECDYSAS 502
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGE Y CGQC + +A + HL+K
Sbjct: 520 YICGECGYRAAKKSTLSQHMRTHTGE-TYKCGQCDYSAAHRTSFNRHLRK 568
Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + +++THTGEKPY C QC + +A L HL
Sbjct: 408 YMCGECGYRAAQRSTLSQNMKTHTGEKPYKCNQCDYSAAKKYKLAEHL 455
Score = 39.7 bits (91), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C Y + + + H+ H+GEKPY CG C R+ + L H++
Sbjct: 268 YKCDQCGYSAAHKSTLEQHVAKHSGEKPYICGVCGHRANQKSDLSRHIR 316
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKP+ C +C +R+A L H++
Sbjct: 436 YKCNQCDYSAAKKYKLAEHLTIHTGEKPFICEECGYRAARKPVLSRHMR 484
>gi|260815010|ref|XP_002602206.1| hypothetical protein BRAFLDRAFT_76895 [Branchiostoma floridae]
gi|229287513|gb|EEN58218.1| hypothetical protein BRAFLDRAFT_76895 [Branchiostoma floridae]
Length = 324
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + + H+R HTGEKPY CG+C FR+ + L H +
Sbjct: 168 YKCDHCDYSTADKSTLDKHLRKHTGEKPYMCGECGFRTTRKSVLSVHTR 216
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RT + C CD+ + G + H+ HTGEKPY CG+C +R+ + L H++
Sbjct: 215 TRTHTGEKPYKCDRCDFSAAAKGNLDQHLAKHTGEKPYMCGECGYRATQKSTLSVHMR 272
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H RTHTGEKPY C +C F +A+ L HL K
Sbjct: 196 YMCGECGFRTTRKSVLSVHTRTHTGEKPYKCDRCDFSAAAKGNLDQHLAK 245
Score = 42.7 bits (99), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + + HIR HTGE+PY C QC + + A L H
Sbjct: 111 YMCRECGYRTAKKCNLSQHIRIHTGERPYKCDQCEYSATKKANLKLH 157
Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTG KPY C QC + +A + L H+
Sbjct: 252 YMCGECGYRATQKSTLSVHMRTHTGVKPYNCQQCNYSAARKSHLTLHI 299
Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G H HTGEKPY C +C +R+A L H++
Sbjct: 96 GDFERHAVKHTGEKPYMCRECGYRTAKKCNLSQHIR 131
>gi|260805206|ref|XP_002597478.1| hypothetical protein BRAFLDRAFT_80513 [Branchiostoma floridae]
gi|229282743|gb|EEN53490.1| hypothetical protein BRAFLDRAFT_80513 [Branchiostoma floridae]
Length = 641
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C Q S L L +P F C C S L++L H RT
Sbjct: 516 CEECSRQFSQLSALKTHMRTHTGEKPYREKPFR--CEECSRQFS-QLSDLKRHMRTHTG- 571
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
PFR C C + ++SH+RTHTGEKP+ C +C+ + + + L H+K
Sbjct: 572 --EKPFR----CEECSRQFSQLSDLKSHMRTHTGEKPFTCEECSRQFSQLGHLKKHVK 623
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 19/120 (15%)
Query: 79 CKHCHSQLSHLDLLD-HCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
C+ C Q S L +L H +T + P+ C C S L++L H RT
Sbjct: 102 CEECSRQFSQLSVLKRHMQT---------HTGEKPYRCEECSKEFS-RLDDLKRHIRTHT 151
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C C +G ++ H+RTHTGEKPY C +C+ + + ++ L H++
Sbjct: 152 G---EKPYR----CEECSRQFSQLGDLKVHMRTHTGEKPYRCEECSRQFSVLSALKTHMR 204
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 14/120 (11%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
+C+ C Q S L L +M P+ C C S L+ L H RT
Sbjct: 388 MCEKCSRQFSQLGSLK-----KHMRTHRGETLQKPYTCEECSRQFS-QLSALKTHMRTHT 441
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C C +G ++ H+RTHTGEKPY C +C+ + + ++ L H++
Sbjct: 442 G---EKPYR----CEECSRQFSQLGDLKKHMRTHTGEKPYTCEECSRQFSQLSDLKRHIQ 494
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 19/120 (15%)
Query: 79 CKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
C+ C Q S L DL H +T + P+ C C S L+ L H RT
Sbjct: 305 CEECSRQFSQLGDLKKHMQT---------HTGEKPYRCEECSRQFS-RLDSLKTHMRTHS 354
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C C+ G ++ HIRTHT EKPY C +C+ + + + L H++
Sbjct: 355 G---EKPYR----CEDCNRQFSEQGALKKHIRTHTDEKPYMCEKCSRQFSQLGSLKKHMR 407
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C +G +++HIR HTGEKPY C +C+ + + ++ L H+
Sbjct: 60 KTHMRTHTGEKPYRCEECSRQFSELGHLKTHIRIHTGEKPYRCEECSRQFSQLSVLKRHM 119
Query: 196 K 196
+
Sbjct: 120 Q 120
Score = 43.9 bits (102), Expect = 0.036, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 20/122 (16%)
Query: 79 CKHCHSQLSHLDLLD-HCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKS 137
C+ C Q S LD L H +T S K + N K
Sbjct: 333 CEECSRQFSRLDSLKTHMRTHSGE----------------KPYRCEDCNRQFSEQGALKK 376
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE---KPYACGQCAFRSASVAGLHYH 194
IRT ++C C +G ++ H+RTH GE KPY C +C+ + + ++ L H
Sbjct: 377 HIRTHTDEKPYMCEKCSRQFSQLGSLKKHMRTHRGETLQKPYTCEECSRQFSQLSALKTH 436
Query: 195 LK 196
++
Sbjct: 437 MR 438
Score = 42.4 bits (98), Expect = 0.097, Method: Composition-based stats.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 22/130 (16%)
Query: 79 CKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRT-- 134
C+ C Q S L DL H +T + P+ C C S L++L H +T
Sbjct: 448 CEECSRQFSQLGDLKKHMRT---------HTGEKPYTCEECSRQFS-QLSDLKRHIQTHT 497
Query: 135 --CKSMIRTDPFRHK-FVCYACDYFSYNIGCMRSHIRTHTGEKPY-----ACGQCAFRSA 186
S +R+ K + C C + +++H+RTHTGEKPY C +C+ + +
Sbjct: 498 GRSPSGVRSAADSSKPYTCEECSRQFSQLSALKTHMRTHTGEKPYREKPFRCEECSRQFS 557
Query: 187 SVAGLHYHLK 196
++ L H++
Sbjct: 558 QLSDLKRHMR 567
Score = 41.6 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C + +++H+RTHTGEKPY C +C+ + + + L H++
Sbjct: 44 YRCEECSKQFSKLSNLKTHMRTHTGEKPYRCEECSRQFSELGHLKTHIR 92
Score = 40.4 bits (93), Expect = 0.43, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 19/105 (18%)
Query: 79 CKHCHSQLSHLD-LLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
C+ C + S LD L H +T + P+ C C S L +L H RT
Sbjct: 130 CEECSKEFSRLDDLKRHIRT---------HTGEKPYRCEECSRQFS-QLGDLKVHMRTHT 179
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
P+R C C + +++H+R+HTGEKPY C +C
Sbjct: 180 G---EKPYR----CEECSRQFSVLSALKTHMRSHTGEKPYRCEEC 217
Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 31/57 (54%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R D ++ C C ++ ++ H+ THTGEKP+ C +C+ + + + L H++
Sbjct: 267 RRDKGVREYRCEECSRQFSHMSSLKRHMWTHTGEKPFRCEECSRQFSQLGDLKKHMQ 323
>gi|260805180|ref|XP_002597465.1| hypothetical protein BRAFLDRAFT_58912 [Branchiostoma floridae]
gi|229282730|gb|EEN53477.1| hypothetical protein BRAFLDRAFT_58912 [Branchiostoma floridae]
Length = 522
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Query: 115 IYCKAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMR 164
IY K + T+ E C C K+ +RT + C C +G ++
Sbjct: 273 IYLKTHMRTHTGEKPYRCEECSRQFSKHSNLKTHMRTHTGEKPYRCEECTKQFSQVGDLK 332
Query: 165 SHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
H+RTHTGEKPY C +C+ + + + GL H++
Sbjct: 333 KHMRTHTGEKPYRCEECSRQFSQLVGLKKHMR 364
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+F+C C +G +++H RTHTGEKPY C +C+ + + L H++
Sbjct: 123 RFMCGECGKEFSQLGGLKTHTRTHTGEKPYRCEECSKEFSQLGALKKHMR 172
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 15/121 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C++C Q +D+L +M + C C S N+L T K+
Sbjct: 402 CENCGKQFGRMDVLK-----KHMRTHTGEKPYR--CEEC----SRQFNQLA----TLKTH 446
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKT 198
+RT + C C+ +G +++H+RTHTGEK Y C +C+ + + ++ L H++
Sbjct: 447 MRTHTGEKPYRCEECNRQFSQLGNLKTHMRTHTGEKTYTCEECSRQFSQLSHLKRHMETH 506
Query: 199 Y 199
Y
Sbjct: 507 Y 507
Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+VC C Y + + H+RTHTGE+P+ C +C + +AS + L HL
Sbjct: 68 YVCGECGYRAAQKFTLTEHLRTHTGERPFKCDRCNYSAASKSTLDRHL 115
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 21/121 (17%)
Query: 79 CKHCHSQLS-HLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
C+ C Q S H +L H +T + P+ C C S + +L +H RT
Sbjct: 290 CEECSRQFSKHSNLKTHMRT---------HTGEKPYRCEECTKQFS-QVGDLKKHMRT-- 337
Query: 137 SMIRTDPFRHKFVCYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
P+R C C FS +G ++ H+RTHTGEKPY C +C+ + + ++ L H+
Sbjct: 338 -HTGEKPYR----CEECSRQFSQLVG-LKKHMRTHTGEKPYRCEKCSMQCSHLSDLRKHM 391
Query: 196 K 196
+
Sbjct: 392 R 392
Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 52/130 (40%), Gaps = 17/130 (13%)
Query: 68 VTTIPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLN 126
+TT + +C C + S L L + P+ C C S L
Sbjct: 115 LTTHTGEKRFMCGECGKEFSQLGGLK--------THTRTHTGEKPYRCEECSKEFS-QLG 165
Query: 127 ELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
L +H RT P R C C +G + H+RTHTGEKPY C +C+ + +
Sbjct: 166 ALKKHMRT---HTGEKPHR----CEECSRQFSELGHLMKHMRTHTGEKPYGCEECSRQFS 218
Query: 187 SVAGLHYHLK 196
+ L H+K
Sbjct: 219 QLGTLKSHMK 228
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C C+Y + + + H+ THTGEK + CG+C + + GL H +
Sbjct: 87 LRTHTGERPFKCDRCNYSAASKSTLDRHLTTHTGEKRFMCGECGKEFSQLGGLKTHTR 144
Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C ++ +R H+RTHTGEKPY C C + + L H+
Sbjct: 360 KKHMRTHTGEKPYRCEKCSMQCSHLSDLRKHMRTHTGEKPYKCENCGKQFGRMDVLKKHM 419
Query: 196 K 196
+
Sbjct: 420 R 420
Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 12/61 (19%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTG------------EKPYACGQCAFRSASVAGLHYHL 195
F C CDY + + SH+ H G EKPY CG+C +R+A L HL
Sbjct: 28 FKCDQCDYAAAKKSTLESHLAMHAGQKPYIQLAKQADEKPYVCGECGYRAAQKFTLTEHL 87
Query: 196 K 196
+
Sbjct: 88 R 88
Score = 40.0 bits (92), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C C S L L++H +RT + C C +G ++SH++THTG
Sbjct: 182 CEECSRQFS-ELGHLMKH-------MRTHTGEKPYGCEECSRQFSQLGTLKSHMKTHTGN 233
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
KPY C +C+ + L H+K
Sbjct: 234 KPYRCEECSRQFGLRMSLKTHIK 256
Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+C C Y + + +H+R HTGE+P+ C QC + +A + L HL
Sbjct: 1 MCGECGYRTAQKSTLFTHMRIHTGERPFKCDQCDYAAAKKSTLESHL 47
Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Query: 151 YACDYFSYNIG---CMRSHIRTHTGEKPYACGQCA 182
Y C+ S G +++HI+THTGEKPY+C +C+
Sbjct: 236 YRCEECSRQFGLRMSLKTHIKTHTGEKPYSCEECS 270
>gi|260799810|ref|XP_002594877.1| hypothetical protein BRAFLDRAFT_86045 [Branchiostoma floridae]
gi|229280114|gb|EEN50888.1| hypothetical protein BRAFLDRAFT_86045 [Branchiostoma floridae]
Length = 580
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CDY + G + SH+ HTGEKPY CG+C R+ S L+ HL+
Sbjct: 377 FKCDQCDYSTVQKGKLNSHLAKHTGEKPYMCGECGHRTTSKHILYVHLR 425
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + G + SH+ HTGEKPY CG+C R+ S L+ HL+
Sbjct: 468 YRCDQCDYSTVQKGKLNSHLAKHTGEKPYMCGECGHRTTSKHILYVHLR 516
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C + + + + H+RTHTGEKPY C QC F +A+ L YHLK
Sbjct: 405 YMCGECGHRTTSKHILYVHLRTHTGEKPYKCDQCNFSAATKLSLKYHLK 453
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C + + + + H+RTHTGEKPY C QC F +A+ L YHLK
Sbjct: 496 YMCGECGHRTTSKHILYVHLRTHTGEKPYKCDQCNFSAATKLSLKYHLK 544
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + SH+ HTGEKPY CG+C +R+ L +H+K
Sbjct: 180 YKCDQCDYSAAQRANLISHLAKHTGEKPYMCGECGYRTHRKGHLTHHMK 228
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 7/57 (12%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHT-------GEKPYACGQCAFRSASVAGLHYHLK 196
++ C CDY + + SH+ HT GEKPY CG+C FR+A +GL H++
Sbjct: 116 EYKCNLCDYSARRKRSLDSHLAKHTYKSKKHAGEKPYMCGECGFRAARKSGLSIHMR 172
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + SH+ H+GEKP+ CG+C +R+ + L H++K
Sbjct: 236 YKCDQCDYSAAKKSTLDSHLVLHSGEKPFMCGECGYRATQKSALTSHMRK 285
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + +H+ THTGEKPY CG+C FR+ + L H++
Sbjct: 62 YKCDQCDYSAKRKYNLDNHLATHTGEKPYKCGECRFRTHEKSLLSQHME 110
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y ++ G + H++ HTGE+PY C QC + +A + L HL
Sbjct: 208 YMCGECGYRTHRKGHLTHHMKVHTGERPYKCDQCDYSAAKKSTLDSHL 255
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C Y + + SH+R HT EKP+ C QC + +A+ + L H+
Sbjct: 264 FMCGECGYRATQKSALTSHMRKHTREKPFKCDQCDYTAATKSALRIHM 311
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 112 PF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
PF C C +T + L H R R PF+ C CDY + +R H+ H
Sbjct: 263 PFMCGEC-GYRATQKSALTSHMR---KHTREKPFK----CDQCDYTAATKSALRIHMSNH 314
Query: 171 TGEKPYACGQCAFRSASVAGLHYHLK 196
TG+K Y C +C FR+ + L H++
Sbjct: 315 TGQKRYLCDKCGFRAYGKSQLTVHMR 340
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H+R HTG KPY C QC + +A A L HL K
Sbjct: 152 YMCGECGFRAARKSGLSIHMRNHTGVKPYKCDQCDYSAAQRANLISHLAK 201
>gi|260787835|ref|XP_002588957.1| hypothetical protein BRAFLDRAFT_89148 [Branchiostoma floridae]
gi|229274129|gb|EEN44968.1| hypothetical protein BRAFLDRAFT_89148 [Branchiostoma floridae]
Length = 667
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CDY + + SH+ HTG+KPY CG+C +R+A + L H++
Sbjct: 411 MRTHTGEKPFKCDQCDYSAAQKNNLDSHLAKHTGDKPYMCGECGYRTALKSNLSKHMR 468
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + ++ L YHL K
Sbjct: 78 YMCGECGYRTDRKSNLSKHMRTHTGEKPYKCDQCDYSASKKCNLDYHLAK 127
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+RTHTGEKPY C QC + +A + L HL K
Sbjct: 246 YMCGECGYRTAHKSHLSRHMRTHTGEKPYKCDQCDYSAAVKSNLKQHLAK 295
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A + L+ HL K
Sbjct: 504 YMCGECGYRATLKSTLSRHMRTHTGEKPYKCDQCNYSAARKSSLNQHLAK 553
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + ++ H+ +TG+KPY CG+C +R+A + L H++
Sbjct: 209 MRTHTGDKPYKCDQCDYSTARQSTLKQHVAWYTGDKPYMCGECGYRTAHKSHLSRHMR 266
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + H+RTHTGEKPY C QC + +A + L+ HL K
Sbjct: 134 YMCGECGYRATLKSTSSRHMRTHTGEKPYKCDQCNYSAALKSSLNQHLAK 183
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 38/87 (43%)
Query: 111 SPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
SP + C S+ + T + + +VC C Y + + H+RTH
Sbjct: 355 SPTGVLCARDASSAKDNSTARKATSANQPEANTGEKPYVCGECGYRTAWGSHLSIHMRTH 414
Query: 171 TGEKPYACGQCAFRSASVAGLHYHLKK 197
TGEKP+ C QC + +A L HL K
Sbjct: 415 TGEKPFKCDQCDYSAAQKNNLDSHLAK 441
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Query: 99 SYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFS 157
S + +P AN P+ C C + + L +H +RT + C CDY +
Sbjct: 64 SLVTQPKANTVEKPYMCGEC-GYRTDRKSNLSKH-------MRTHTGEKPYKCDQCDYSA 115
Query: 158 YNIGCMRSHIRTHTGEKPYACGQCAFRS 185
+ H+ HTG+KPY CG+C +R+
Sbjct: 116 SKKCNLDYHLAKHTGDKPYMCGECGYRA 143
Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 11/83 (13%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C Y AV S+ L +H +P+ +C C Y + + H+RTHTG+
Sbjct: 593 CDYSAAVKSSLDRHLAKH-------TGDEPY----MCGECGYRTTQKSNLVKHMRTHTGD 641
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
KPY C QC + +A + L H K
Sbjct: 642 KPYKCNQCDYSAAQKSTLKKHCK 664
Score = 42.7 bits (99), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG++PY CG+C +R+ + L H++
Sbjct: 579 MRTHTGDKPYKCDQCDYSAAVKSSLDRHLAKHTGDEPYMCGECGYRTTQKSNLVKHMR 636
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTG+KPY CG+C +R+ + L H++
Sbjct: 476 YKCDQCDYSASTKSHLDYHLAKHTGDKPYMCGECGYRATLKSTLSRHMR 524
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HTGEK Y C QC + +++ + L YHL K
Sbjct: 448 YMCGECGYRTALKSNLSKHMRIHTGEKTYKCDQCDYSASTKSHLDYHLAK 497
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C+Y + + H+ HTG+KP+ CG+C +R+ + L H++
Sbjct: 153 MRTHTGEKPYKCDQCNYSAALKSSLNQHLAKHTGDKPHMCGECGYRTTWKSDLSVHMR 210
Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+C C Y + + H+RTHTG+KPY C QC + +A + L H+
Sbjct: 191 MCGECGYRTTWKSDLSVHMRTHTGDKPYKCDQCDYSTARQSTLKQHV 237
>gi|391329353|ref|XP_003739139.1| PREDICTED: zinc finger protein 568-like [Metaseiulus occidentalis]
Length = 170
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 101 MIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRT------DPFRHKFVCYACD 154
+++P N F+P I V + N + C + + DP + F C C+
Sbjct: 44 ILQPLQNYAFTPAEIALWNVATQETNNNFTNDGNCGRIGKPGRKAVRDPNK-PFQCNVCE 102
Query: 155 YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
Y S + H+R HTGEKP+AC +C +R++ L H ++ +
Sbjct: 103 YSSKSKSNFTIHMRIHTGEKPFACSECDYRTSQKGNLRIHKERRH 147
>gi|357619439|gb|EHJ72014.1| hypothetical protein KGM_00959 [Danaus plexippus]
Length = 303
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C C + N +L H R K +P++ CY CDY +YN HIR H G
Sbjct: 86 CPECNRYTAENNEQLTRHIR--KQHRGENPYQ----CYMCDYSTYNSVVFEEHIRIHKGI 139
Query: 174 KPYACGQCAFRSASVAGLHYH 194
KP+ C C SAS L H
Sbjct: 140 KPFTCKYCPHSSASKRNLQKH 160
>gi|260795627|ref|XP_002592806.1| hypothetical protein BRAFLDRAFT_65388 [Branchiostoma floridae]
gi|229278030|gb|EEN48817.1| hypothetical protein BRAFLDRAFT_65388 [Branchiostoma floridae]
Length = 1484
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 19/120 (15%)
Query: 79 CKHCHSQLSHLDLL-DHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
C+ C S+ S LD L +H +T + P+ C C S L +L K
Sbjct: 677 CEECSSRFSQLDALKNHLRT---------HTGEKPYRCEECNKQFS-RLGDL-------K 719
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ +RT ++C C +G +++H+RTHTGEKPYAC +C+ + + + L+ H++
Sbjct: 720 THMRTHTGEKPYICEECSRQFNQLGHLKTHMRTHTGEKPYACVECSRQFSELGHLNKHMR 779
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 58/133 (43%), Gaps = 17/133 (12%)
Query: 79 CKHCHSQLSHLD-----LLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCR 133
C+ C SQ SHL+ LL H Y + FS K + T+ E C
Sbjct: 381 CEACSSQFSHLNTLKNHLLTHTGEKPYRC-EECSRQFSRL-ESLKTHMRTHTGEKPYKCE 438
Query: 134 TC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
C K+ +RT + C C +G ++ HIRTHTGEKPY C QC+
Sbjct: 439 ECSRQFSHLESFKTHMRTHTGEKPYKCEECSRHFGQVGDLKKHIRTHTGEKPYRCEQCSK 498
Query: 184 RSASVAGLHYHLK 196
+ + ++ L H++
Sbjct: 499 QFSHLSNLKKHMR 511
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 15/132 (11%)
Query: 79 CKHCHSQLSHLDLLD---HCKTCSYMIR-PNANNTFSPFCIYCKAVLSTNLNELIEHCRT 134
C+ C Q S LD L H T R + FS + K + T+ E C
Sbjct: 941 CEECSRQFSRLDELRKHMHTHTGEKPYRCEECSRQFSQL-GHLKTHIRTHTGEKPYRCEE 999
Query: 135 CKSM----------IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFR 184
C +RT ++ C C +G ++SH+RTHTGEKPY C +C+ +
Sbjct: 1000 CSRQFGRPDSQNTHMRTHTGEKRYTCEECSKQFSKLGHLKSHMRTHTGEKPYRCEECSRQ 1059
Query: 185 SASVAGLHYHLK 196
+ + L H++
Sbjct: 1060 VSELGALKTHMR 1071
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 21/147 (14%)
Query: 53 MSLDQILNLNLSVLLVTTIPTQNHSLCKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFS 111
SL + ++ + H C+ C+ Q S L DL H +T +
Sbjct: 8 QSLGDVRRKARKDSSERSVREKKHYRCEECNKQFSQLSDLKRHMRT---------HTGEK 58
Query: 112 PF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACD-YFSYNIGCMRSHIRT 169
P+ C C LS L +L H +RT + C C FS I + +HIRT
Sbjct: 59 PYKCEECSRQLS-QLGDLKRH-------MRTHTGEKPYKCEECSRQFSVLIA-LNTHIRT 109
Query: 170 HTGEKPYACGQCAFRSASVAGLHYHLK 196
HTGEKPY C +C+ + + ++ L H++
Sbjct: 110 HTGEKPYKCEECSSQFSQLSHLKTHMR 136
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 69/179 (38%), Gaps = 27/179 (15%)
Query: 18 EPTLERNRTNITSDVYIAVLVFSNLTFFITAQLVLMSLDQILNLNLSVLLVTTIPTQNHS 77
E +E R ITS Y S + +AQ SL + + V ++ +
Sbjct: 544 EARIEEKRRKITS--YTRSRRMSTTS---SAQ----SLGDVRRKSEKGSSVRSVREKKRY 594
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKS 137
+ C+ Q L YM + C C+ S L L EH
Sbjct: 595 KREECNGQFRQLK--------EYMRTHTGEKPYR--CEECRKQFS-RLGHLEEH------ 637
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IRT + C C + +++H+RTHTGEKPY C +C+ R + + L HL+
Sbjct: 638 -IRTHTGEKPYKCEECSKPFSKLCNLKTHMRTHTGEKPYKCEECSSRFSQLDALKNHLR 695
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C +G +++H+R+HTGEKPY C +C+ + + + L H+
Sbjct: 1219 KTHMRTHTGEKPYTCEECSRQFSQLGALKTHMRSHTGEKPYKCEECSKQFSQLGELKKHM 1278
Query: 196 K 196
+
Sbjct: 1279 R 1279
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 66/172 (38%), Gaps = 19/172 (11%)
Query: 25 RTNITSDVYIAVLVFSNLTFFITAQLVLMSLDQILNLNLSVLLVTTIPTQNHSLCKHCHS 84
RT+ Y + ++ +A+ S + V ++ + C+ C
Sbjct: 1155 RTHTREKPYRSCTRSRRMSTTSSAE----SFGDVRRKAKKDSSVRSVREEKRYRCEECSK 1210
Query: 85 QLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPF 144
Q SHL L ++M ++ C C S L L H R S P+
Sbjct: 1211 QFSHLGHLK-----THMRTHTGEKPYT--CEECSRQFS-QLGALKTHMR---SHTGEKPY 1259
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C +G ++ H+RTHTGEKPY C +C+ + L H++
Sbjct: 1260 K----CEECSKQFSQLGELKKHMRTHTGEKPYKCEKCSKQFCQQGPLKTHMR 1307
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 13/131 (9%)
Query: 79 CKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPFCIYC--KAVLSTNLNELIEHCRTC 135
C+ C Q S L +L H +T + FC K + T+ E C C
Sbjct: 1261 CEECSKQFSQLGELKKHMRTHTGEKPYKCEKCSKQFCQQGPLKTHMRTHTGEKPYKCEDC 1320
Query: 136 ----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
KS +RT + C C +G + H+RTHTGEKPY C +C+ +
Sbjct: 1321 SKQFSQKSNLKSHMRTHTGEKPYRCEECSRQFSELGSLTKHMRTHTGEKPYKCEECSRQF 1380
Query: 186 ASVAGLHYHLK 196
+ ++ L H++
Sbjct: 1381 SVLSALKTHMR 1391
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C +G +++H+RTHTGEKPY C +C+ + + L H+
Sbjct: 1387 KTHMRTHTGEKPYRCEKCSRQFSELGNLKAHVRTHTGEKPYRCDECSRQFGVLCDLKKHM 1446
Query: 196 K 196
+
Sbjct: 1447 R 1447
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+F C C +G ++ H+RTHTGEKPY C +C+ + + L H++
Sbjct: 882 RFRCEECSKQFRQLGHLKEHMRTHTGEKPYKCEECSRQFSQFCNLKKHMR 931
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C +G ++ H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 188 KKHMRTHTGEKPYRCEDCGRQFSELGHLKKHMRTHTGEKPYKCEECSRQFSRLGHLKTHM 247
Query: 196 K 196
+
Sbjct: 248 R 248
Score = 43.5 bits (101), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C+ + ++ HIRTHTGEKPY C C+ R + + + H++
Sbjct: 1107 YKCEECNRQFSKLSALKRHIRTHTGEKPYRCEDCSRRFSELGTMKKHMR 1155
Score = 42.7 bits (99), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 61/145 (42%), Gaps = 17/145 (11%)
Query: 53 MSLDQILNLNLSVLLVTTIPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSP 112
SL + + V ++ + C+ C Q S L L+ IR + P
Sbjct: 299 QSLGGVRRKTEMDISVRSVRREKRYKCEECSRQFSKLSHLEE------HIRTHTGE--KP 350
Query: 113 F-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHT 171
+ C C S L L H RT P+R C AC ++ +++H+ THT
Sbjct: 351 YRCEECSRQFS-KLGNLKAHMRT---HTGEKPYR----CEACSSQFSHLNTLKNHLLTHT 402
Query: 172 GEKPYACGQCAFRSASVAGLHYHLK 196
GEKPY C +C+ + + + L H++
Sbjct: 403 GEKPYRCEECSRQFSRLESLKTHMR 427
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 62/160 (38%), Gaps = 43/160 (26%)
Query: 79 CKHCHSQLSHLDLLD------------HCKTCSYMI-RPNANNT---------------- 109
C+ C Q S L L C+ CS RP++ NT
Sbjct: 969 CEECSRQFSQLGHLKTHIRTHTGEKPYRCEECSRQFGRPDSQNTHMRTHTGEKRYTCEEC 1028
Query: 110 ---FSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYF 156
FS + K+ + T+ E C C K+ +RT + C C
Sbjct: 1029 SKQFSKL-GHLKSHMRTHTGEKPYRCEECSRQVSELGALKTHMRTHTGEKPYQCEVCKRQ 1087
Query: 157 SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+G +++H+ THTGEKPY C +C + + ++ L H++
Sbjct: 1088 FNRLGALKTHMLTHTGEKPYKCEECNRQFSKLSALKRHIR 1127
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C + +++H+RTHTGEKPY C +C + + + L H+
Sbjct: 663 KTHMRTHTGEKPYKCEECSSRFSQLDALKNHLRTHTGEKPYRCEECNKQFSRLGDLKTHM 722
Query: 196 K 196
+
Sbjct: 723 R 723
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C +G +++H+RTHT EKPY C +C+ + + + L H+
Sbjct: 216 KKHMRTHTGEKPYKCEECSRQFSRLGHLKTHMRTHTDEKPYKCEECSRQFSQLYSLKAHM 275
Score = 39.3 bits (90), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 66/175 (37%), Gaps = 23/175 (13%)
Query: 24 NRTNITSDVYIAVLVFSNLTFFITAQLVLMSLDQILNLNLSVLLVTTIPTQNHSLCKHCH 83
RT+ Y ++ +AQ SL + V + + C+ C
Sbjct: 834 KRTHTGEKPYRKCTTSRRMSTTTSAQ----SLGDVRRRAKKDSSVRPVRKEKRFRCEECS 889
Query: 84 SQLSHLD-LLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRT 141
Q L L +H +T + P+ C C S N L +H RT
Sbjct: 890 KQFRQLGHLKEHMRT---------HTGEKPYKCEECSRQFSQFCN-LKKHMRT---HTGD 936
Query: 142 DPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C C + +R H+ THTGEKPY C +C+ + + + L H++
Sbjct: 937 KPYR----CEECSRQFSRLDELRKHMHTHTGEKPYRCEECSRQFSQLGHLKTHIR 987
Score = 36.6 bits (83), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 15/119 (12%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKS 137
+C+ C Q + L L ++M ++ C+ C S L L +H
Sbjct: 732 ICEECSRQFNQLGHLK-----THMRTHTGEKPYA--CVECSRQFS-ELGHLNKH------ 777
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C +++H+RTHTGEKPY C C+ + + + L H +
Sbjct: 778 -MRTHTGEKPYKCEECSRQFSLFHHLKTHMRTHTGEKPYTCEGCSRQFSELGNLKTHKR 835
>gi|260810226|ref|XP_002599904.1| hypothetical protein BRAFLDRAFT_155447 [Branchiostoma floridae]
gi|229285188|gb|EEN55916.1| hypothetical protein BRAFLDRAFT_155447 [Branchiostoma floridae]
Length = 281
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+R R F+C C Y +Y+ + H+RTHTGEKP+ C QC +++A L HLKK
Sbjct: 27 MRRHKGRKPFLCGECGYRAYHKFRLVEHMRTHTGEKPFKCDQCDYKTAYKVDLVAHLKK 85
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + + H+RTHTGEK + C +C ++++ + H+KK
Sbjct: 149 FMCDECGYKARDKHQLDEHMRTHTGEKSFRCNECGYKTSYKRSVVRHMKK 198
Score = 36.6 bits (83), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + H R HTGE+PY+C +C +++ L H++
Sbjct: 233 YKCEECDYSTARKPDFTRHRRCHTGERPYSCQECDYKAKHKFHLVKHMR 281
>gi|260781013|ref|XP_002585623.1| hypothetical protein BRAFLDRAFT_258062 [Branchiostoma floridae]
gi|229270641|gb|EEN41634.1| hypothetical protein BRAFLDRAFT_258062 [Branchiostoma floridae]
Length = 327
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IRT + C CDY + + H+ HTGEKPY CG+C +R+A + L H+K
Sbjct: 63 IRTHTGEKPYKCDQCDYSAAQKANLDLHLTKHTGEKPYMCGECGYRAACKSNLSRHMK 120
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IRT + C CDY + + H+ HTGEKPY CG+C +R+A + L H+K
Sbjct: 260 IRTHTGEKPYKCDQCDYSAAQKANLDLHLTKHTGEKPYMCGECGYRAACKSNLSRHMK 317
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + HIRTHTGEKPY C QC + +A A L HL K
Sbjct: 44 YMCGECGYRTNLKSTLSKHIRTHTGEKPYKCDQCDYSAAQKANLDLHLTK 93
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + HIRTHTGEKPY C QC + +A A L HL K
Sbjct: 241 YMCGECGYRTNLKSTLSKHIRTHTGEKPYKCDQCDYSAAQKANLDLHLTK 290
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
++T F C C+Y + + H+ HTGEKPY CG+C FR+A
Sbjct: 119 MKTHTGEKPFKCDQCNYSAAQKSSLVKHLLKHTGEKPYMCGECGFRTA 166
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKPY CG+C +R+ + L H++
Sbjct: 16 YKCDQCDYSAAQKCALVIHVTKHTGEKPYMCGECGYRTNLKSTLSKHIR 64
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKPY CG+C +R+ + L H++
Sbjct: 213 YKCDQCDYSAAQKCALVIHVTKHTGEKPYMCGECGYRTNLKSTLSKHIR 261
Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H++THTGEKP+ C QC + +A + L HL
Sbjct: 100 YMCGECGYRAACKSNLSRHMKTHTGEKPFKCDQCNYSAAQKSSLVKHL 147
Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
++C C + + + +H+RTHTGEKPY C QC + +A
Sbjct: 156 YMCGECGFRTALKFTLLNHMRTHTGEKPYKCDQCDYSAA 194
>gi|47217351|emb|CAG11056.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1387
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 53/134 (39%), Gaps = 19/134 (14%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCK---AVLSTNLN---ELIEHC 132
C CH L + L K C + + PFCIY A + +L +L C
Sbjct: 1211 CDVCHKFLKTPEQLLEHKKCHTV---PSGGLKCPFCIYSTNRPAAMECHLKTHCKLEYRC 1267
Query: 133 RTCKSM----------IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
R C+ + +R + + C C Y S + H+R HTGE+P+ C +C
Sbjct: 1268 RICQGLWPDQASLEAHVRAHRLGNHYRCEQCGYLSKTANKLIEHVRVHTGERPFHCDRCP 1327
Query: 183 FRSASVAGLHYHLK 196
+ L+ H K
Sbjct: 1328 YSCKRKDNLNLHKK 1341
>gi|395530166|ref|XP_003767169.1| PREDICTED: zinc finger protein 513 [Sarcophilus harrisii]
Length = 606
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 34/77 (44%), Gaps = 10/77 (12%)
Query: 128 LIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA 177
L+ CR C K ++T F C C Y S + + H RTHTGEKPY
Sbjct: 214 LLYSCRLCAFVSHYSSHLKRHMQTHSGEKPFRCGRCPYASAQLVNLTRHTRTHTGEKPYR 273
Query: 178 CGQCAFRSASVAGLHYH 194
C C F +S+ L H
Sbjct: 274 CPHCPFACSSLGNLRRH 290
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 31/52 (59%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C + S+ ++ H++TH+GEKP+ CG+C + SA + L H +
Sbjct: 213 RLLYSCRLCAFVSHYSSHLKRHMQTHSGEKPFRCGRCPYASAQLVNLTRHTR 264
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 7/69 (10%)
Query: 126 NELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
N L H +T PFR C C Y S ++ ++ H R HTGEKPY C C +
Sbjct: 441 NHLARHMKTHSG---EKPFR----CARCPYASAHLDNLKRHQRVHTGEKPYKCPLCPYAC 493
Query: 186 ASVAGLHYH 194
++A L H
Sbjct: 494 GNLANLKRH 502
Score = 43.9 bits (102), Expect = 0.038, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 44/118 (37%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C C +HLD L + +P P C Y NL L H R
Sbjct: 458 CARCPYASAHLDNLKRHQRVHTGEKPYK----CPLCPYA----CGNLANLKRHGRIHSG- 508
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
PFR C C+Y ++ H+ HTGEKP+ CG CA+ + H K
Sbjct: 509 --DKPFR----CSLCNYSCNQSMNLKRHMLRHTGEKPFRCGTCAYTTGHWDNYKRHQK 560
Score = 43.1 bits (100), Expect = 0.063, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
F C C + ++ + H++TH+GEKP+ C +C + SA + L H
Sbjct: 428 FACSLCPFATHYPNHLARHMKTHSGEKPFRCARCPYASAHLDNLKRH 474
>gi|260832582|ref|XP_002611236.1| hypothetical protein BRAFLDRAFT_207418 [Branchiostoma floridae]
gi|229296607|gb|EEN67246.1| hypothetical protein BRAFLDRAFT_207418 [Branchiostoma floridae]
Length = 470
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + G + H+ HTGEKPY CG+C +R+A + L H++
Sbjct: 241 YKCDQCDYSAGHKGNLSRHMAQHTGEKPYMCGECGYRTADRSNLSLHMR 289
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 112 PF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
PF C C+ + N + L EH +R + C CDY + + G + H H
Sbjct: 360 PFMCGQCE-YRTANRSHLSEH-------MRRHSGEKPYKCDQCDYSAAHKGNLVKHKAKH 411
Query: 171 TGEKPYACGQCAFRSASVAGLHYHLKK 197
TGEKP+ CG+C +R+A + L H++K
Sbjct: 412 TGEKPFMCGECGYRTADRSHLTVHMRK 438
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C C Y + ++ +R HIR HTGEKPY C QC + +A L H+
Sbjct: 10 YTCEECGYRTAHMSHLREHIRKHTGEKPYKCDQCGYSAARKNTLTQHM 57
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKPY CG+C +R+A+ + L HL+
Sbjct: 185 YKCDQCDYSAIRKVYLGRHMTKHTGEKPYMCGECGYRAAARSSLSKHLR 233
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ IR + C C Y + + H+ THTG KPY CG+C FR+ + + L H+
Sbjct: 26 REHIRKHTGEKPYKCDQCGYSAARKNTLTQHMATHTGNKPYVCGECGFRTTTSSSLAVHV 85
Query: 196 KK 197
+K
Sbjct: 86 RK 87
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 118 KAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA 177
K++L+ ++ +L++H R P++ C CDY + + H+ HTGEKP+
Sbjct: 106 KSILNRHIADLMKHTR---KHTSEKPYK----CDQCDYSAAQKVHLDRHVTKHTGEKPFM 158
Query: 178 CGQCAFRSASVAGLHYHLKK 197
CG+C +R+ L H+ +
Sbjct: 159 CGECGYRTTDRFSLSEHMSR 178
Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + H+ HTGEKP+ CGQC +R+A+ + L H+++
Sbjct: 333 YKCDQCDYSAAHKVSFDIHLTKHTGEKPFMCGQCEYRTANRSHLSEHMRR 382
Score = 39.7 bits (91), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + + H+R HTGEKPY C C + +A L H+ K
Sbjct: 417 FMCGECGYRTADRSHLTVHMRKHTGEKPYKCDLCDYSAAQKCNLDQHVAK 466
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 8/58 (13%)
Query: 148 FVCYACDYFSYNIGCMRS--------HIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + ++ H+R HTGEKPY C QC + +A HL K
Sbjct: 297 YKCDQCDYSATQKNTFKTADRSYLTRHMRKHTGEKPYKCDQCDYSAAHKVSFDIHLTK 354
Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+R HTG KPY C QC + + L H+
Sbjct: 213 YMCGECGYRAAARSSLSKHLRIHTGVKPYKCDQCDYSAGHKGNLSRHM 260
Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + + H+ HTGEKPY C QC + + L H+ K
Sbjct: 157 FMCGECGYRTTDRFSLSEHMSRHTGEKPYKCDQCDYSAIRKVYLGRHMTK 206
Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 170 HTGEKPYACGQCAFRSASVAGLHYHLKK 197
HTGEKPY C +C +R+A ++ L H++K
Sbjct: 4 HTGEKPYTCEECGYRTAHMSHLREHIRK 31
Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+VC C + + + H+R HTGE+PY C C + +A+ + L+ H+
Sbjct: 66 YVCGECGFRTTTSSSLAVHVRKHTGERPYRCDHCEYFAATKSILNRHI 113
Score = 36.2 bits (82), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 8/58 (13%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--------AFRSASVAGLHYHLKK 197
++C C Y + + + H+RTHTG KPY C QC F++A + L H++K
Sbjct: 269 YMCGECGYRTADRSNLSLHMRTHTGVKPYKCDQCDYSATQKNTFKTADRSYLTRHMRK 326
>gi|348566200|ref|XP_003468890.1| PREDICTED: zinc finger protein 40-like [Cavia porcellus]
Length = 2675
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 106 ANNTFSP-FCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH--KFVCYACDYFSYNIGC 162
AN+T SP +Y +++ +N +E + C +++ + K++C C+
Sbjct: 345 ANSTQSPPLPLYNPTHVASVVNRSVE--QMCNLLLKDQKPKKQGKYICEYCNRACAKPSV 402
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ HIR+HTGE+PY C C F + + L+ H K H
Sbjct: 403 LLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAH 440
Score = 45.1 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 2058 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 2113
>gi|256086122|ref|XP_002579254.1| zinc finger protein [Schistosoma mansoni]
gi|353232230|emb|CCD79585.1| putative zinc finger protein [Schistosoma mansoni]
Length = 324
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IRT + C C +R+HIRTHTGEKPY C QC A + LH H+K
Sbjct: 263 IRTHTGERPYPCRYCPKAFPQKDHLRAHIRTHTGEKPYRCPQCLKAFAQLGNLHRHVK 320
>gi|260815773|ref|XP_002602647.1| hypothetical protein BRAFLDRAFT_81927 [Branchiostoma floridae]
gi|229287958|gb|EEN58659.1| hypothetical protein BRAFLDRAFT_81927 [Branchiostoma floridae]
Length = 316
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+VC C Y + + + H+RTHTGEKPY CG+C +R+A + L HL+
Sbjct: 79 YVCETCGYKTAHKYKLSRHLRTHTGEKPYMCGECGYRAALKSTLSRHLR 127
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + + HIRTHTGEKP+ C QC + + S + L HLK
Sbjct: 192 YMCGECGYRTAHRPNLSKHIRTHTGEKPFKCDQCDYSAVSKSNLENHLK 240
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT ++C C Y + + H+RTHTGEKPY CG+C +++ + H++
Sbjct: 98 LRTHTGEKPYMCGECGYRAALKSTLSRHLRTHTGEKPYKCGECGYKATRQFTISQHMR 155
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + N + H++ H GEKPY CG+C +R+A L H++
Sbjct: 154 MRTHTGEKPYKCELCDYSAVNRSTLDYHLKAKHNGEKPYMCGECGYRTAHRPNLSKHIR 212
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C Y + + H+RTHTGEKPY C C + + + + L YHLK
Sbjct: 126 LRTHTGEKPYKCGECGYKATRQFTISQHMRTHTGEKPYKCELCDYSAVNRSTLDYHLK 183
Score = 43.1 bits (100), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 20/111 (18%)
Query: 95 CKTCSYMI--RPN------ANNTFSPF-CIYCK--AVLSTNLNELIEHCRTCKSMIRTDP 143
C C Y RPN + PF C C AV +NL H +T + ++
Sbjct: 194 CGECGYRTAHRPNLSKHIRTHTGEKPFKCDQCDYSAVSKSNLEN---HLKTKHTTVKPS- 249
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+C C Y + + H+RTHTGEKPY C QC + +A + L+ H
Sbjct: 250 -----ICGECGYRTAIKSHLTQHMRTHTGEKPYTCDQCDYSAARKSSLNRH 295
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
IRT F C CDY + + + +H++T HT KP CG+C +R+A + L H++
Sbjct: 211 IRTHTGEKPFKCDQCDYSAVSKSNLENHLKTKHTTVKPSICGECGYRTAIKSHLTQHMR 269
Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
C CDY + + H HTGEKPY C C +++A L HL+
Sbjct: 53 CDECDYSAAWKTALDQHQAKHTGEKPYVCETCGYKTAHKYKLSRHLR 99
>gi|357620114|gb|EHJ72420.1| putative zinc finger protein 300 [Danaus plexippus]
Length = 326
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+++C C + ++ H+RTHTG KP+AC QC FRS++ + L H ++
Sbjct: 201 QYLCSYCGWSFAQASNLKVHLRTHTGAKPHACSQCGFRSSAASSLRRHQRR 251
>gi|260810236|ref|XP_002599909.1| hypothetical protein BRAFLDRAFT_212198 [Branchiostoma floridae]
gi|229285193|gb|EEN55921.1| hypothetical protein BRAFLDRAFT_212198 [Branchiostoma floridae]
Length = 272
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 107 NNTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRS 165
+ PF C C +++N + L EH +R F+C C Y +Y +
Sbjct: 38 HKGLKPFRCGEC-GYMASNKSRLFEH-------LRKHTEEKPFMCGECGYRAYRKCRLVE 89
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
H+RTHTGEKP+ C C ++++ L YH+K+
Sbjct: 90 HMRTHTGEKPFKCNHCNYKTSFKQELSYHMKR 121
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+ C CDY + N + H R HTGEKPY+C +C ++S + H++K +
Sbjct: 156 YKCKDCDYSTSNNSHLSRHRRRHTGEKPYSCQECDYKSVDKSNFVRHMRKKH 207
Score = 36.6 bits (83), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++VC C + + + +H R H G KP+ CG+C + +++ + L HL+K
Sbjct: 15 RYVCDVCGFKTSSKHSFSNHRRRHKGLKPFRCGECGYMASNKSRLFEHLRK 65
>gi|260791418|ref|XP_002590726.1| hypothetical protein BRAFLDRAFT_89532 [Branchiostoma floridae]
gi|229275922|gb|EEN46737.1| hypothetical protein BRAFLDRAFT_89532 [Branchiostoma floridae]
Length = 578
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 68/157 (43%), Gaps = 24/157 (15%)
Query: 57 QILNLNLSVLLVTTIPTQNHSLCKHCHSQLSHLD--LLDH-------CKTCSYMIRPNAN 107
Q +L+ + + T T C +C +Q S+LD L H C C Y N++
Sbjct: 226 QKCHLSQHMRIHTGEKTYKCDQCDYCAAQKSNLDRHLSKHTGDKPYMCGECGYRTARNSD 285
Query: 108 NT------FSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNI 160
N +PF C C + ++L H +RT ++C C + +
Sbjct: 286 NQPETCTGNTPFMCGEC-GHRTARKSDLSRH-------VRTHTGDKPYMCGECGHRTARK 337
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ H+RTHTGEKP+ C QC + +A+ L HL K
Sbjct: 338 SDLSRHVRTHTGEKPFKCNQCDYSAAAKFNLDKHLSK 374
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY CG+C RSA + L HL+
Sbjct: 1 MRTHTGEKPYKCDQCDYSAARKSHLNQHLAKHTGEKPYMCGECGHRSAQKSDLFKHLR 58
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + HIRTHTGEKPY C QC + +A + L HL K
Sbjct: 159 YMCGECGYRTARKSDLSQHIRTHTGEKPYKCDQCDYSAAHKSTLKQHLAK 208
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 119 AVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAC 178
AVL TNL+ + T ++C C Y + + H+RTH EKPY C
Sbjct: 474 AVLKTNLDR----------HLTTHTGEKPYMCDKCGYRAAQRSSLSQHMRTHMSEKPYKC 523
Query: 179 GQCAFRSASVAGLHYHLKK 197
QC + +A A LH H+ K
Sbjct: 524 DQCDYSAAQKATLHQHMSK 542
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KPY CGQC +R+A L H++
Sbjct: 512 MRTHMSEKPYKCDQCDYSAAQKATLHQHMSKHTGDKPYMCGQCRYRTALKGDLSKHMR 569
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTG+KPY CG+C +R+A + L H++
Sbjct: 131 YKCDQCDYSTARKDSLDQHLAKHTGDKPYMCGECGYRTARKSDLSQHIR 179
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IRT + C CDY + + ++ H+ HTG+KPY CG+C + + L H++
Sbjct: 178 IRTHTGEKPYKCDQCDYSAAHKSTLKQHLAKHTGQKPYMCGECGYSTVQKCHLSQHMR 235
Score = 43.1 bits (100), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + G + H+R HTGEKPY C QC + +A + L H+ K
Sbjct: 381 YMCGECGNRTAGKGDLSKHMRIHTGEKPYKCDQCDYSAAQKSTLDQHVAK 430
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ TG+KPY CG+C R+ L H+K
Sbjct: 409 YKCDQCDYSAAQKSTLDQHVAKRTGDKPYMCGECGLRTVDRGHLSRHMK 457
Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C + + G + H++THTGEKPY C QC + + L HL
Sbjct: 437 YMCGECGLRTVDRGHLSRHMKTHTGEKPYKCDQCDYSAVLKTNLDRHL 484
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 167 IRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RTHTGEKPY C QC + +A + L+ HL K
Sbjct: 1 MRTHTGEKPYKCDQCDYSAARKSHLNQHLAK 31
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HTGEK Y C QC + +A + L HL K
Sbjct: 215 YMCGECGYSTVQKCHLSQHMRIHTGEKTYKCDQCDYCAAQKSNLDRHLSK 264
Score = 36.6 bits (83), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 9/59 (15%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTG---------EKPYACGQCAFRSASVAGLHYHLKK 197
++C C + S + H+RTHTG EKPY C QC + +A+ L HL K
Sbjct: 38 YMCGECGHRSAQKSDLFKHLRTHTGEKPYKCDHCEKPYKCNQCDYSAAAKFNLDKHLSK 96
>gi|260806366|ref|XP_002598055.1| hypothetical protein BRAFLDRAFT_253031 [Branchiostoma floridae]
gi|229283326|gb|EEN54067.1| hypothetical protein BRAFLDRAFT_253031 [Branchiostoma floridae]
Length = 227
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + N + H+ HTGEKPY CG+C +R+A L H++
Sbjct: 19 MRTHTVEKPYKCDQCDYSAANRSTLDRHLTKHTGEKPYMCGECGYRAARKYHLSQHMR 76
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H++THTGEKPY CG+C + +A + L H++
Sbjct: 169 YKCNQCDYTTAWKSNLNHHVKTHTGEKPYMCGECGYSTAKKSHLTEHVR 217
Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C+Y + + H+R H+GEKPY C QC + +A + L++H+K
Sbjct: 141 YKCDQCNYSTAQKSNLSQHMRNHSGEKPYKCNQCDYTTAWKSNLNHHVK 189
Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGEKPY C QC + +A A + H+
Sbjct: 56 YMCGECGYRAARKYHLSQHMRTHTGEKPYKCDQCDYSAARKADVDSHI 103
Score = 42.7 bits (99), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+RTHTG KPY C QC + +A + L H++
Sbjct: 113 YMCGECGYRAVKKSTLSRHMRTHTGIKPYKCDQCNYSTAQKSNLSQHMR 161
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + SHI HT EKPY CG+C +R+ + L H++
Sbjct: 75 MRTHTGEKPYKCDQCDYSAARKADVDSHIAAKHTVEKPYMCGECGYRAVKKSTLSRHMR 133
Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C++ + + H+RTHT EKPY C QC + +A+ + L HL K
Sbjct: 1 MCGQCEFRTAKKSVLSRHMRTHTVEKPYKCDQCDYSAANRSTLDRHLTK 49
>gi|402865837|ref|XP_003897112.1| PREDICTED: zinc finger protein 40 [Papio anubis]
Length = 2718
Score = 50.1 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 102 IRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH--KFVCYACDYFSYN 159
I P + P IY +++ +N+ +E + C +++ + K++C C+
Sbjct: 360 ISPVNSTQSPPTPIYNSTHVASVVNQSVE--QMCNLLLKDQKPKKQGKYICEYCNRACAK 417
Query: 160 IGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ HIR+HTGE+PY C C F + + L+ H K H
Sbjct: 418 PSVLLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAH 458
Score = 44.3 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 2085 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 2140
>gi|348508584|ref|XP_003441834.1| PREDICTED: zinc finger protein Pegasus-like [Oreochromis niloticus]
Length = 417
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC + + + LIEH R I T H+ C C + S + +H+R+HTGE
Sbjct: 87 CSYC-SYANKGMARLIEHIR-----IHTGEKPHR--CQLCPFASAYERHLEAHMRSHTGE 138
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C CAFR + + L +H ++ +
Sbjct: 139 KPYKCDLCAFRCSDRSNLSHHRRRRH 164
Score = 42.7 bits (99), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
K+ C C Y + + + HIR HTGEKP+ C C F SA L H++
Sbjct: 84 KYKCSYCSYANKGMARLIEHIRIHTGEKPHRCQLCPFASAYERHLEAHMR 133
>gi|260791349|ref|XP_002590702.1| hypothetical protein BRAFLDRAFT_60038 [Branchiostoma floridae]
gi|229275898|gb|EEN46713.1| hypothetical protein BRAFLDRAFT_60038 [Branchiostoma floridae]
Length = 198
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC F +A A L +HL K
Sbjct: 112 YMCGECGYRAVWKSHLSQHMRTHTGEKPYKCDQCDFAAADKAALGHHLAK 161
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C Y + + H+RTHTGEKPY C QC + +A + L HL+K
Sbjct: 1 MCGECGYRTTQKSNLSRHMRTHTGEKPYKCDQCDYSAADKSALGRHLEK 49
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 14/100 (14%)
Query: 99 SYMIRPNANNTFSPFCIYC--KAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYF 156
++ R N + + C C +AV ++L++ +RT + C CD+
Sbjct: 101 DHLARHNGDKPY--MCGECGYRAVWKSHLSQ----------HMRTHTGEKPYKCDQCDFA 148
Query: 157 SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ + + H+ HTG KP+ CG+C +R+ + L HLK
Sbjct: 149 AADKAALGHHLAKHTGNKPFMCGECGYRTTQKSSLSRHLK 188
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + H+RTHTGEKPY C QC + +A + L+ HL +
Sbjct: 56 FMCEECGYRTSLKAHLSRHMRTHTGEKPYKCDQCDYSAAKKSTLNDHLAR 105
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + H+ HTGEKP+ C +C +R++ A L H++
Sbjct: 19 MRTHTGEKPYKCDQCDYSAADKSALGRHLEKHTGEKPFMCEECGYRTSLKAHLSRHMR 76
>gi|260817312|ref|XP_002603531.1| hypothetical protein BRAFLDRAFT_58735 [Branchiostoma floridae]
gi|229288850|gb|EEN59542.1| hypothetical protein BRAFLDRAFT_58735 [Branchiostoma floridae]
Length = 336
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C N+G + HIRTHTGEKPY C +C + + + L H+
Sbjct: 76 KAHMRTHTGEKPYACDECSKQFRNLGNLERHIRTHTGEKPYKCEECGRQFSEIGSLKNHM 135
Query: 196 K 196
+
Sbjct: 136 R 136
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 49/117 (41%), Gaps = 15/117 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
CK C Q S ++L ++M ++ C C NL L H
Sbjct: 62 CKECSKQFSRQNILK-----AHMRTHTGEKPYA--CDECSKQFR-NLGNLERH------- 106
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
IRT + C C IG +++H+RTHTGEKPY C +C + + L H+
Sbjct: 107 IRTHTGEKPYKCEECGRQFSEIGSLKNHMRTHTGEKPYRCEECGKQFRQLGNLKTHI 163
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 53/122 (43%), Gaps = 16/122 (13%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C Q S LD+L+ +M + C C S L H RT
Sbjct: 230 CEECSKQFSRLDILE-----KHMRTHTGEKPYK--CEECSKQFS-ERGSLRMHMRT---H 278
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKT 198
P++ C C +G ++ HIRTHTGEKPY C +C+ + + + L H K+T
Sbjct: 279 TGDKPYK----CEECSKQFGQLGDLKVHIRTHTGEKPYRCEECSKQFSQLGSLKKH-KRT 333
Query: 199 YH 200
H
Sbjct: 334 QH 335
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
S +R+ + C C +G +R+H+RTHTGEKPY C +C+
Sbjct: 21 SSVRSIREEKPYKCEKCSRQFKQLGNLRTHMRTHTGEKPYRCKECS 66
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C +G ++ H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 188 KAHMRTHTGEKPYRCEKCSRQFSQLGNLQIHMRTHTGEKPYRCEECSKQFSRLDILEKHM 247
Query: 196 K 196
+
Sbjct: 248 R 248
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C +++H+RTHTGEKPY C +C+ + + + L H++
Sbjct: 172 YKCEKCSKHFSQQSILKAHMRTHTGEKPYRCEKCSRQFSQLGNLQIHMR 220
>gi|260832592|ref|XP_002611241.1| hypothetical protein BRAFLDRAFT_207497 [Branchiostoma floridae]
gi|229296612|gb|EEN67251.1| hypothetical protein BRAFLDRAFT_207497 [Branchiostoma floridae]
Length = 224
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 105 NANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCM 163
N + PF C C + + L EH +R + C CDY + G +
Sbjct: 51 NKHTGEKPFLCGQC-GYRTARRSHLSEH-------MRRHSGEKPYKCDQCDYSASRKGYL 102
Query: 164 RSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
H+ HTGEKPY CG+C FR+ + L H+++
Sbjct: 103 DKHMLRHTGEKPYMCGECGFRTPDRSSLTRHMRR 136
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C C + LI H RT PF+ C CDY + + H+ HTGE
Sbjct: 5 CTEC-GYRGAKKDNLIRHTRT---HTGEKPFK----CDQCDYTAAQKSTLDLHLNKHTGE 56
Query: 174 KPYACGQCAFRSASVAGLHYHLKK 197
KP+ CGQC +R+A + L H+++
Sbjct: 57 KPFLCGQCGYRTARRSHLSEHMRR 80
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + + H+RTHTGEKPY C QC F + L+ HL K
Sbjct: 171 FICGKCGYKTNILSSLTRHMRTHTGEKPYKCDQCDFSATRKRDLNNHLAK 220
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+F C C Y + H RTHTGEKP+ C QC + +A + L HL K
Sbjct: 2 RFACTECGYRGAKKDNLIRHTRTHTGEKPFKCDQCDYTAAQKSTLDLHLNK 52
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + + H+R H+G KPY C QC + +A L+ H+ K
Sbjct: 115 YMCGECGFRTPDRSSLTRHMRRHSGVKPYKCDQCDYSAAQKFALYRHMAK 164
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGE P+ CG+C +++ ++ L H++
Sbjct: 143 YKCDQCDYSAAQKFALYRHMAKHTGENPFICGKCGYKTNILSSLTRHMR 191
>gi|260787843|ref|XP_002588961.1| hypothetical protein BRAFLDRAFT_89152 [Branchiostoma floridae]
gi|229274133|gb|EEN44972.1| hypothetical protein BRAFLDRAFT_89152 [Branchiostoma floridae]
Length = 433
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + G + H+ HTG+KPY CG+C +R+A + L H++
Sbjct: 345 MRTHTGEKPYKCEQCDYSATTKGSLEYHLAQHTGDKPYMCGECGYRAAQKSDLVKHMR 402
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 119 AVLSTNLNE-LIEH-------CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
A +NLN+ L H C C M RT + C CDY + + H H
Sbjct: 94 AARKSNLNQHLAMHTGDKPYMCGECGHM-RTHTGEKPYKCDQCDYSATRKYHLDQHQAIH 152
Query: 171 TGEKPYACGQCAFRSASVAGLHYHLK 196
TGEKPY CG+C +R+A + L YH++
Sbjct: 153 TGEKPYMCGECGYRTAQKSTLSYHMR 178
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + + H+RTHTGEKPY C QC + + + L YHL
Sbjct: 326 YMCGECGYRTAHTSHLSRHMRTHTGEKPYKCEQCDYSATTKGSLEYHL 373
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A+ + L HL K
Sbjct: 158 YMCGECGYRTAQKSTLSYHMRTHTGEKPYKCDQCDYSAAAKSTLDRHLAK 207
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H HTG+KPY CG+C +R+A + L H++
Sbjct: 289 MRTHTGEKPYKCNQCDYSAAQKSSLYQHQAKHTGDKPYMCGECGYRTAHTSHLSRHMR 346
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A + L+ H K
Sbjct: 270 YMCGECGYRATQKSHLSKHMRTHTGEKPYKCNQCDYSAAQKSSLYQHQAK 319
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H RTHTGEKPY C QC + +A + L+ HL
Sbjct: 57 YMCGECGYRAARKSLLSEHTRTHTGEKPYKCDQCDYSAARKSNLNQHL 104
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ H+G+KPY CG+C +R+A + L HL+
Sbjct: 177 MRTHTGEKPYKCDQCDYSAAAKSTLDRHLAKHSGDKPYLCGECGYRTARKSTLSIHLR 234
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CDY + H+ HTG+KPY CG+C +R+ + L H++
Sbjct: 233 LRTHTGEKPFKCDQCDYSAAMKSTFDRHLAKHTGDKPYMCGECGYRATQKSHLSKHMR 290
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+RTHTGEKPY C QC + + + L+ H K
Sbjct: 382 YMCGECGYRAAQKSDLVKHMRTHTGEKPYKCDQCDYSATKKSTLNNHCK 430
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 99 SYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFS 157
S + +P AN P+ C C + + L EH RT P++ C CDY +
Sbjct: 43 SLVSQPEANTGDKPYMCGEC-GYRAARKSLLSEHTRT---HTGEKPYK----CDQCDYSA 94
Query: 158 YNIGCMRSHIRTHTGEKPYACGQCA 182
+ H+ HTG+KPY CG+C
Sbjct: 95 ARKSNLNQHLAMHTGDKPYMCGECG 119
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKP+ C QC + +A + HL K
Sbjct: 214 YLCGECGYRTARKSTLSIHLRTHTGEKPFKCDQCDYSAAMKSTFDRHLAK 263
>gi|260832628|ref|XP_002611259.1| hypothetical protein BRAFLDRAFT_71214 [Branchiostoma floridae]
gi|229296630|gb|EEN67269.1| hypothetical protein BRAFLDRAFT_71214 [Branchiostoma floridae]
Length = 555
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C+Y + G + SH THTGEKPY CG+C +R+A + L H++
Sbjct: 154 YKCDQCNYSAAQKGDLNSHKATHTGEKPYMCGECGYRTAVRSNLTVHMR 202
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKPY CG+C FR+A+ L H++
Sbjct: 98 YKCGQCDYSAAQKCTLDRHLTKHTGEKPYMCGECGFRTAARYSLTVHMR 146
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C + + G + H+ HTGEKPY CG+C FR+A+ L H++
Sbjct: 363 FKCDQCTFSAVAKGELDQHMTKHTGEKPYMCGECGFRTAARYSLTVHMR 411
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + H+ HTGEKPY CG C +R+A L H+K+
Sbjct: 307 YKCGQCDYSAAQKCTLDRHMTKHTGEKPYMCGGCGYRTAYKDALTVHMKR 356
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C C + + G + H+ THTGEKP+ CG+C +R+A L H+
Sbjct: 475 YKCDQCGFSATKKGGLDQHMATHTGEKPFMCGECGYRTAQRCHLSRHM 522
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+FVC C Y + + + H+R HTG KPY C QC F + GL H+
Sbjct: 446 RFVCVECGYRTAHRCNLTVHLRIHTGVKPYKCDQCGFSATKKGGLDQHM 494
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C CDY + + H HTGEKP+ CG+C +R+A L H+
Sbjct: 210 YKCDQCDYSATGKSGLDKHKAKHTGEKPFMCGECGYRTAQRCHLSRHM 257
Score = 42.4 bits (98), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 16/63 (25%)
Query: 151 YACDYFSYNIGCMRS----------------HIRTHTGEKPYACGQCAFRSASVAGLHYH 194
Y CD + Y++ R+ H R HTGEKPY CGQC + +A L H
Sbjct: 266 YKCDQYDYSVTDKRTVDSRDLRTAAKAKLLRHTRKHTGEKPYKCGQCDYSAAQKCTLDRH 325
Query: 195 LKK 197
+ K
Sbjct: 326 MTK 328
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 154 DYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
DY + + + H R HTGEKPY CGQC + +A L HL K
Sbjct: 76 DYSTASKAKLVRHTRKHTGEKPYKCGQCDYSAAQKCTLDRHLTK 119
Score = 39.7 bits (91), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C + + + H+R+HTGEKPY C QC + +A L+ H
Sbjct: 126 YMCGECGFRTAARYSLTVHMRSHTGEKPYKCDQCNYSAAQKGDLNSH 172
Score = 39.3 bits (90), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H+R+HTG+KPY C QC + + A L H+ K
Sbjct: 391 YMCGECGFRTAARYSLTVHMRSHTGDKPYKCDQCDYSATKKANLDSHMAK 440
Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTH G KPY C QC + + +GL H K
Sbjct: 182 YMCGECGYRTAVRSNLTVHMRTHIGAKPYKCDQCDYSATGKSGLDKHKAK 231
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + SH+ HTGEK + C +C +R+A L HL+
Sbjct: 419 YKCDQCDYSATKKANLDSHMAKHTGEKRFVCVECGYRTAHRCNLTVHLR 467
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 25/50 (50%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + H+ THTGEK Y C QC + S L HL K
Sbjct: 503 FMCGECGYRTAQRCHLSRHMTTHTGEKRYKCDQCDYSSTDKRHLKKHLDK 552
>gi|260803089|ref|XP_002596424.1| hypothetical protein BRAFLDRAFT_279229 [Branchiostoma floridae]
gi|229281679|gb|EEN52436.1| hypothetical protein BRAFLDRAFT_279229 [Branchiostoma floridae]
Length = 571
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C + S LD L S+M + C C S +EL R+ K+
Sbjct: 432 CQECSKRFSQLDHLK-----SHMKTHTGEKPY--ICEEC----SKQFSEL----RSLKNH 476
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C +G ++ HIRTHTGEKPY C +C+ + + + L H+K
Sbjct: 477 MRTHTGEKPYKCEECSRHFSELGSLKIHIRTHTGEKPYRCEECSKQFSHLGNLKSHMK 534
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 59/132 (44%), Gaps = 15/132 (11%)
Query: 79 CKHCHSQLSHLDLLD-HCKTCSYMIR---PNANNTFSPFCIYCKAVLSTNLNELIEHCRT 134
C+ C+ + S LD L H KT + R + FS K+ + T+ E C
Sbjct: 264 CEECNKRFSRLDHLKTHMKTHTGEKRYVCEECSKQFSDL-YSLKSHIKTHTGEKPYRCDE 322
Query: 135 C----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFR 184
C KS +R+ + C C +IG ++SH++THTGEKPY C +C+
Sbjct: 323 CSKQFSHLGSLKSHMRSHTGEKPYTCEECSKQFSHIGNLKSHMKTHTGEKPYRCEECSQH 382
Query: 185 SASVAGLHYHLK 196
+ L H++
Sbjct: 383 FSDKGTLKIHMR 394
Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C C Q SHL L S+M ++ C C S H KS
Sbjct: 320 CDECSKQFSHLGSLK-----SHMRSHTGEKPYT--CEECSKQFS--------HIGNLKSH 364
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++T + C C + G ++ H+RTHTGEKPY C +C+ + + + L H++
Sbjct: 365 MKTHTGEKPYRCEECSQHFSDKGTLKIHMRTHTGEKPYRCEECSRQFSRLFRLKQHMR 422
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C + ++ HIRTHTGEKPY C +C R + + L H+K
Sbjct: 225 MRTHTGEKPYRCEECSRQFSRLFRLKQHIRTHTGEKPYGCEECNKRFSRLDHLKTHMK 282
Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C + ++SH++THTGEKPY C +C+ + + + L H+
Sbjct: 418 KQHMRTHTGEKPYRCQECSKRFSQLDHLKSHMKTHTGEKPYICEECSKQFSELRSLKNHM 477
Query: 196 K 196
+
Sbjct: 478 R 478
Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C G ++ H+RTHTGEKPY C +C+ + + L H+
Sbjct: 110 KMHLRTHTGEKPYKCEKCSRQFSQPGALKMHMRTHTGEKPYRCDECSKQFIRLERLKNHM 169
Query: 196 K 196
+
Sbjct: 170 R 170
Score = 39.3 bits (90), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C ++ H+RTHTGEKPY C +C+ + + L H+
Sbjct: 26 KTHMRTHTGEKPYKCEECSKRFTQSCALKRHMRTHTGEKPYRCEECSRQFRDLGDLKKHM 85
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+++H+RTHTGEKPY C +C+ R L H++
Sbjct: 25 LKTHMRTHTGEKPYKCEECSKRFTQSCALKRHMR 58
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IRT + C C+ + +++H++THTGEK Y C +C+ + + + L H+
Sbjct: 250 KQHIRTHTGEKPYGCEECNKRFSRLDHLKTHMKTHTGEKRYVCEECSKQFSDLYSLKSHI 309
Query: 196 K 196
K
Sbjct: 310 K 310
Score = 36.2 bits (82), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C + +++H+R HTGEKPY C +C+ + + L H+
Sbjct: 138 KMHMRTHTGEKPYRCDECSKQFIRLERLKNHMRAHTGEKPYRCQECSRQFSFSTNLKSHM 197
Query: 196 K 196
K
Sbjct: 198 K 198
>gi|323652508|gb|ADX98506.1| RE1-silencing transcription factor [Danio rerio]
Length = 854
Score = 50.1 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 15/114 (13%)
Query: 95 CKTCSYMI------RPNANNTFSPFCIYCK--AVLSTNLNELIEHCRTCKSMIRTDPFRH 146
C C+Y + + N F C + S N I+H IRT
Sbjct: 238 CTICAYTTISQYHWKKHLRNHFPSKLFTCSQCSYFSDRKNNYIQH-------IRTHTGER 290
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
F C C+Y S + H+RTH+GE+P+ C C++ +A+ + H ++ ++
Sbjct: 291 PFQCIYCEYSSSQKTHLTRHMRTHSGERPFKCDNCSYLAANQHEVTRHARQVHN 344
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 43/112 (38%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C+ C Y N F + + K ++ + C C K +R
Sbjct: 206 CERCGY-----NTNRFDHYMAHLKHHTKEGEDQRVFKCTICAYTTISQYHWKKHLRNHFP 260
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C YFS HIRTHTGE+P+ C C + S+ L H++
Sbjct: 261 SKLFTCSQCSYFSDRKNNYIQHIRTHTGERPFQCIYCEYSSSQKTHLTRHMR 312
Score = 37.7 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 50/122 (40%), Gaps = 19/122 (15%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKS 137
C++ SQ +HL H +T ++ PF C C + L+ N +E+ H R
Sbjct: 297 CEYSSSQKTHLT--RHMRT---------HSGERPFKCDNC-SYLAANQHEVTRHAR---- 340
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ P C C Y + + + H+ H + + C C + ++ L YH+K
Sbjct: 341 QVHNGP--KPLSCPYCQYKTADRSNFKKHVELHVNPRQFLCPVCKYAASKKCNLQYHIKS 398
Query: 198 TY 199
+
Sbjct: 399 RH 400
>gi|260832648|ref|XP_002611269.1| hypothetical protein BRAFLDRAFT_210741 [Branchiostoma floridae]
gi|229296640|gb|EEN67279.1| hypothetical protein BRAFLDRAFT_210741 [Branchiostoma floridae]
Length = 422
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + G + H+ TH+GEKPY CG+C +R+A + L H+ K
Sbjct: 121 YKCDLCDYSATQKGDLDKHMTTHSGEKPYICGECGYRTARKSDLSRHMMK 170
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 7/55 (12%)
Query: 148 FVCYACDYFSYNIGCMR-------SHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C CDY S + GC++ +HI+ HTGEKPY C QC + +A + L H+
Sbjct: 177 YKCDQCDYSSTDKGCLKKHTSSLATHIKKHTGEKPYKCDQCDYSAAEKSSLDRHM 231
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%)
Query: 122 STNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
ST+ L +H + + I+ + C CDY + + H+ HTGEKPY CG+C
Sbjct: 186 STDKGCLKKHTSSLATHIKKHTGEKPYKCDQCDYSAAEKSSLDRHMPRHTGEKPYMCGEC 245
Query: 182 AFRSASVAGLHYHLK 196
FR+++ L H++
Sbjct: 246 GFRTSARFSLTVHMR 260
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + H HTGEKPY CG+C +R+A + L H++K
Sbjct: 65 YNCDQCDYSAARKENLDRHKAKHTGEKPYMCGECGYRTADRSALTVHMRK 114
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C+Y + G + SH+ HTGEKPY C +C +R+A L H+K
Sbjct: 268 YKCDQCNYSAPKKGDLDSHMAKHTGEKPYMCDECGYRTAHRCNLTVHMK 316
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + H HTGEKP+ CG+C +R+A + L H+ K
Sbjct: 9 YKCDQCDYSAARKNQLERHKAIHTGEKPFMCGECGYRTARKSDLSRHMMK 58
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 151 YACDYFSYNIG---CMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
Y CD Y+ G ++ H HTGEKPY C +C +R AS + L H++
Sbjct: 324 YKCDQCHYSTGRKPDLKRHKAKHTGEKPYMCDECGYRMASRSSLTVHMR 372
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 151 YACDYFSYNIGCMRS---HIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
Y CD Y + S H+RTHTG KPY C QC + +A L H K
Sbjct: 352 YMCDECGYRMASRSSLTVHMRTHTGAKPYKCDQCDYSTAKKGNLDRHRTK 401
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H+R+HTGEKPY C QC + + L H+ K
Sbjct: 240 YMCGECGFRTSARFSLTVHMRSHTGEKPYKCDQCNYSAPKKGDLDSHMAK 289
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + H+ HTG+KPY C QC + +A L H K
Sbjct: 37 FMCGECGYRTARKSDLSRHMMKHTGDKPYNCDQCDYSAARKENLDRHKAK 86
Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + + H+ HTG+KPY C QC + S L H
Sbjct: 149 YICGECGYRTARKSDLSRHMMKHTGDKPYKCDQCDYSSTDKGCLKKH 195
>gi|392933927|ref|NP_001255972.1| transcriptional repressor CTCFL isoform 3 [Homo sapiens]
gi|111550142|gb|ABH10093.1| BORIS transcription factor transcript variant B1 [Homo sapiens]
Length = 700
Score = 50.1 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H +T K+ +F C C Y M +HIRTHTGE
Sbjct: 460 CRYCSAVFHERY-ALIQHQKTHKN-------EKRFKCKHCSYACKQERHMTAHIRTHTGE 511
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KP+ C C FR + H+ + YH
Sbjct: 512 KPFTCLSCNKCFRQKQLLNAHF---RKYH 537
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 324 TSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 383
Query: 190 GLHYHLK 196
L H++
Sbjct: 384 KLKRHMR 390
Score = 43.9 bits (102), Expect = 0.035, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +R+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 358 KRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEKPYECHICHTRFTQSGTMKIHI 417
Score = 37.7 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 130 EHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSAS 187
E ++ K+ +T + F C C + S + H++THT EKP+ C C FR+ +
Sbjct: 239 EKAKSTKNQRKTKGAKGTFHCDVCMFTSSRMSSFNRHMKTHTSEKPHLCHLCLKTFRTVT 298
Query: 188 VAGLH 192
+ H
Sbjct: 299 LLRNH 303
Score = 35.8 bits (81), Expect = 9.5, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLK 196
++T +C+ C + +R+H+ THTG +PY C C AF ++ H K
Sbjct: 276 MKTHTSEKPHLCHLCLKTFRTVTLLRNHVNTHTGTRPYKCNDCNMAFVTSGELVRHRRYK 335
Query: 197 KTY 199
T+
Sbjct: 336 HTH 338
>gi|260823062|ref|XP_002604002.1| hypothetical protein BRAFLDRAFT_57770 [Branchiostoma floridae]
gi|229289327|gb|EEN60013.1| hypothetical protein BRAFLDRAFT_57770 [Branchiostoma floridae]
Length = 489
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + G + H+ HTGEKPY CG+C +R+ + L H++
Sbjct: 229 MRTHTGERPYTCDQCDYSAAQKGDLDKHLVKHTGEKPYMCGECGYRATQKSDLSKHMR 286
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + + H+ HTGEKPY CG+C +R+A + L H++
Sbjct: 126 YKCDQCDYSAAHKSSLEQHVAKHTGEKPYICGECGYRTAQKSDLATHMR 174
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H R HTGEKPY CG+C +R+A L H++
Sbjct: 173 MRTHTGEKPYQCDQCDYSAARKSNLDKHQRKHTGEKPYMCGECGYRTAHQCHLSRHMR 230
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + HIR HTGEKPY CG+C +R+ L H++
Sbjct: 294 YKCDQCDYSATEKYTLAKHIRKHTGEKPYMCGECGYRATVKTNLSRHMR 342
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + +H+RTHTGEKPY C QC + +A + L H +K
Sbjct: 154 YICGECGYRTAQKSDLATHMRTHTGEKPYQCDQCDYSAARKSNLDKHQRK 203
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IR ++C C Y + + H+RTHTGEKPY CG+C F++A + L H++
Sbjct: 61 IRKHTGEKPYMCGECGYRTILKSDLSRHLRTHTGEKPYMCGECGFKAARKSYLSTHMR 118
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H HTGEKPY CG+C FR+A + L H++
Sbjct: 397 MRTHTGEKPYKCDQCDYSAAEKHHLIDHQTRHTGEKPYMCGECGFRTAHRSTLSIHMR 454
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C Y +A + TNL+ R ++ R P++ C CDY + + ++ H HTGE
Sbjct: 327 CGY-RATVKTNLS------RHMRTHTREKPYK----CDQCDYSAIDKSNLKQHQVKHTGE 375
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
KPY CG+C + + + L H++
Sbjct: 376 KPYICGECGYGTVYRSHLSRHMR 398
Score = 43.1 bits (100), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+RTHTGE+PY C QC + +A L HL K
Sbjct: 210 YMCGECGYRTAHQCHLSRHMRTHTGERPYTCDQCDYSAAQKGDLDKHLVK 259
Score = 42.7 bits (99), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + + H+R HTGEKPY C QC + +A + L+ H++K
Sbjct: 434 YMCGECGFRTAHRSTLSIHMRIHTGEKPYKCDQCDYSAAEKSSLNRHVRK 483
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HTGEKPY C QC + + L H++K
Sbjct: 266 YMCGECGYRATQKSDLSKHMRIHTGEKPYKCDQCDYSATEKYTLAKHIRK 315
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + A + L H++K
Sbjct: 14 YICEECGYRADCKAHLFRHMRTHTGEKPYKCDQCDYSVAVKSNLVNHIRK 63
Score = 35.8 bits (81), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
IR ++C C Y + + H+RTHT EKPY C QC + + + L H
Sbjct: 313 IRKHTGEKPYMCGECGYRATVKTNLSRHMRTHTREKPYKCDQCDYSAIDKSNLKQH 368
>gi|156938289|ref|NP_033596.3| zinc finger Y-chromosomal protein 1 [Mus musculus]
gi|342187353|sp|P10925.3|ZFY1_MOUSE RecName: Full=Zinc finger Y-chromosomal protein 1
Length = 782
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 56/135 (41%), Gaps = 21/135 (15%)
Query: 70 TIPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFS-PFCIYCKAVLSTNLNE- 127
TI T+ + C C LSH L C + N T FC Y + T LN
Sbjct: 459 TIKTEKTTECDDCRKNLSHAGTL--CTHKTMHTEKGVNKTCKCKFCDY-ETAEQTLLNHH 515
Query: 128 -LIEHCRTCKSMIRTDPFRHKF--VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFR 184
L+ H R KF +C C + ++ HIR HTGEKPY C C ++
Sbjct: 516 LLVVH-------------RKKFPHICGECGKGFRHPSALKKHIRVHTGEKPYECQYCEYK 562
Query: 185 SASVAGLHYHLKKTY 199
SA + L H+K +
Sbjct: 563 SADSSNLKTHIKSKH 577
>gi|432951455|ref|XP_004084823.1| PREDICTED: zinc finger protein 791-like [Oryzias latipes]
Length = 358
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%), Gaps = 2/42 (4%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA--FRSAS 187
FVC CD + + +++H+RTHTGE+PY+C +CA FR S
Sbjct: 211 FVCKECDKTYFQMSALKAHMRTHTGERPYSCKECAKSFRQRS 252
Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 17/111 (15%)
Query: 95 CKTC--SYMIRPN------ANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFR 145
CK C S+ +PN ++ PF C C ++ R K +R
Sbjct: 73 CKECNKSFTKKPNLKTHMKIHSGERPFSCKECNKSFTSK--------RNLKIHMRIHTGE 124
Query: 146 HKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CD I ++H+R HTGE+P+ C +C GL H++
Sbjct: 125 KPFFCKECDKGFRQISHFKTHMRIHTGERPFLCKECNSSFTFENGLKIHMR 175
Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 136 KSMIRTDPFRHKFVCYACDY-FSYNIGCMRSHIRTHTGEKPYACGQC 181
K+ +R F+C C+ F++ G ++ H+R HTGE+PY+C +C
Sbjct: 143 KTHMRIHTGERPFLCKECNSSFTFENG-LKIHMRNHTGERPYSCKEC 188
Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
K+ +RT + C C R+H+RTHTGEKP+ C +C
Sbjct: 227 KAHMRTHTGERPYSCKECAKSFRQRSHFRTHMRTHTGEKPFFCKEC 272
>gi|119361502|sp|Q2EI20.1|REST_DANRE RecName: Full=RE1-silencing transcription factor; AltName:
Full=Neural-restrictive silencer factor
gi|87204325|gb|ABD32118.1| RE-1 silencer of transcription [Danio rerio]
Length = 855
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 15/114 (13%)
Query: 95 CKTCSYMI------RPNANNTFSPFCIYCK--AVLSTNLNELIEHCRTCKSMIRTDPFRH 146
C C+Y + + N F C + S N I+H IRT
Sbjct: 238 CTICAYTTISQYHWKKHLRNHFPSKLFTCSQCSYFSDRKNNYIQH-------IRTHAGER 290
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
F C C+Y S + H+RTH+GE+P+ C C++ +A+ + H ++ ++
Sbjct: 291 PFQCIYCEYSSSQKTHLTRHMRTHSGERPFKCDNCSYLAANQHEVTRHARQVHN 344
Score = 37.7 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 50/122 (40%), Gaps = 19/122 (15%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKS 137
C++ SQ +HL H +T ++ PF C C + L+ N +E+ H R
Sbjct: 297 CEYSSSQKTHLT--RHMRT---------HSGERPFKCDNC-SYLAANQHEVTRHAR---- 340
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ P C C Y + + + H+ H + + C C + ++ L YH+K
Sbjct: 341 QVHNGP--KPLSCPYCQYKTADRSNFKKHVELHVNPRQFLCPVCKYAASKKCNLQYHIKS 398
Query: 198 TY 199
+
Sbjct: 399 RH 400
>gi|292613318|ref|XP_002661875.1| PREDICTED: oocyte zinc finger protein XlCOF6-like [Danio rerio]
Length = 254
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 151 YACDYFSYNIGC---MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
Y C N C + SHIRTHTGEKPY CGQC A L +H+K+
Sbjct: 190 YICTQCGKNFKCKSYLDSHIRTHTGEKPYKCGQCGKSYKQRANLSHHMKR 239
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C C ++ HIR HTGEKP+AC QC + L H+
Sbjct: 134 YTCPECGKSFRQKQHLKLHIRIHTGEKPFACQQCGNSFTQIQALQNHM 181
>gi|189528266|ref|XP_001922907.1| PREDICTED: RE1-silencing transcription factor [Danio rerio]
Length = 854
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 15/114 (13%)
Query: 95 CKTCSYMI------RPNANNTFSPFCIYCK--AVLSTNLNELIEHCRTCKSMIRTDPFRH 146
C C+Y + + N F C + S N I+H IRT
Sbjct: 238 CTICAYTTISQYHWKKHLRNHFPSKLFTCSQCSYFSDRKNNYIQH-------IRTHTGER 290
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
F C C+Y S + H+RTH+GE+P+ C C++ +A+ + H ++ ++
Sbjct: 291 PFQCIYCEYSSSQKTHLTRHMRTHSGERPFKCDNCSYLAANQHEVTRHARQVHN 344
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 43/112 (38%), Gaps = 15/112 (13%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C+ C Y N F + + K ++ + C C K +R
Sbjct: 206 CERCGY-----NTNRFDHYMAHLKHHTKEGEDQRVFKCTICAYTTISQYHWKKHLRNHFP 260
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C YFS HIRTHTGE+P+ C C + S+ L H++
Sbjct: 261 SKLFTCSQCSYFSDRKNNYIQHIRTHTGERPFQCIYCEYSSSQKTHLTRHMR 312
Score = 37.7 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 50/122 (40%), Gaps = 19/122 (15%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKS 137
C++ SQ +HL H +T ++ PF C C + L+ N +E+ H R
Sbjct: 297 CEYSSSQKTHLT--RHMRT---------HSGERPFKCDNC-SYLAANQHEVTRHAR---- 340
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ P C C Y + + + H+ H + + C C + ++ L YH+K
Sbjct: 341 QVHNGP--KPLSCPYCQYKTADRSNFKKHVELHVNPRQFLCPVCKYAASKKCNLQYHIKS 398
Query: 198 TY 199
+
Sbjct: 399 RH 400
>gi|26345536|dbj|BAC36419.1| unnamed protein product [Mus musculus]
Length = 782
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 56/135 (41%), Gaps = 21/135 (15%)
Query: 70 TIPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFS-PFCIYCKAVLSTNLNE- 127
TI T+ + C C LSH L C + N T FC Y + T LN
Sbjct: 459 TIKTEKTTECDDCRKNLSHAGTL--CTHKTMHTEKGVNKTCKCKFCDY-ETAEQTLLNHH 515
Query: 128 -LIEHCRTCKSMIRTDPFRHKF--VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFR 184
L+ H R KF +C C + ++ HIR HTGEKPY C C ++
Sbjct: 516 LLVVH-------------RKKFPHICGECGKGFRHPSALKKHIRVHTGEKPYECQYCEYK 562
Query: 185 SASVAGLHYHLKKTY 199
SA + L H+K +
Sbjct: 563 SADSSNLKTHIKSKH 577
>gi|397469122|ref|XP_003806213.1| PREDICTED: transcriptional repressor CTCFL isoform 2 [Pan paniscus]
Length = 606
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H +T K+ +F C C Y M +HIRTHTGE
Sbjct: 410 CRYCPAVFHERY-ALIQHQKTHKN-------EKRFKCKHCSYACKQERHMTAHIRTHTGE 461
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KP+ C C FR + H+ + YH
Sbjct: 462 KPFTCLSCNKCFRQKQLLNAHF---RKYH 487
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 324 TSGELVRHTRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 383
Query: 190 GLHYHLK 196
L H++
Sbjct: 384 KLKRHMR 390
Score = 40.0 bits (92), Expect = 0.53, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 130 EHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSAS 187
E R+ K+ +T + F C C + S + H++THT EKP+ C C FR+ +
Sbjct: 239 EKARSTKNQRKTKGAKQTFHCDVCMFTSSRMSSFNRHMKTHTNEKPHLCHLCLKTFRTVT 298
Query: 188 VAGLH 192
+ H
Sbjct: 299 LLRNH 303
Score = 36.2 bits (82), Expect = 8.5, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKTY 199
+C+ C + +R+H+ THTG +PY C C AF ++ H K T+
Sbjct: 286 LCHLCLKTFRTVTLLRNHVNTHTGTRPYKCNDCNMAFVTSGELVRHTRYKHTH 338
>gi|260818767|ref|XP_002604554.1| hypothetical protein BRAFLDRAFT_79416 [Branchiostoma floridae]
gi|229289881|gb|EEN60565.1| hypothetical protein BRAFLDRAFT_79416 [Branchiostoma floridae]
Length = 940
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 63/153 (41%), Gaps = 18/153 (11%)
Query: 47 TAQLVLMSLDQILNLNLSVLLVTTIPTQNHS---LCKHCHSQLSHLDLLDHCKTCSYMIR 103
T + M + N L T I T +C+ C Q S L L S+M
Sbjct: 256 TGEKPYMCEKCGIQFNEPRNLKTHIRTHTGEKPYMCEACGRQFSRLSTLK-----SHMRT 310
Query: 104 PNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCM 163
+ C C S L L KS +RT + C C ++G +
Sbjct: 311 HTGEKPYK--CEECGRQFS-QLGAL-------KSHMRTHTGEKPYKCETCSKKFNHLGHL 360
Query: 164 RSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+HIRTHTGEKPY C QC+ + + + L++HL+
Sbjct: 361 NTHIRTHTGEKPYKCEQCSRQFSRIDNLNFHLR 393
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
KS +RT + C C G +++H+RTHTGEKPY C +C +R + L
Sbjct: 165 KSHMRTHTGEKPYKCEECSRQFSKSGNLKTHMRTHTGEKPYRCEECDWRFGRLGDL 220
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C AC + ++ ++ H+RTHTGEKPY CG C + + L H+
Sbjct: 873 KTHMRTHTGEKPYKCEACGHQFSSMRDLKRHMRTHTGEKPYGCGACGRQFTRLYRLKTHM 932
Query: 196 K 196
+
Sbjct: 933 R 933
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
K +RT + C CD +G +++HI THTGEKPY CG C
Sbjct: 606 KKHMRTHTGEKPYSCEVCDKQFRQLGHLKTHILTHTGEKPYGCGACG 652
Score = 42.7 bits (99), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
K+ IRT + C AC + ++SH+RTHTGEKPY C +C+
Sbjct: 550 KTHIRTHTKEKPYGCGACGRQFTRMNSLKSHMRTHTGEKPYKCEECS 596
Score = 42.7 bits (99), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C +G ++ H+ THTGEKPY CG+C + A + L H++
Sbjct: 773 YKCEECSRPFSELGTLKKHMLTHTGEKPYGCGECGRQFARMNCLKRHMR 821
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Query: 123 TNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
T LN L H RT + PF C C + +++HIRTHT EKPY CG C
Sbjct: 516 TRLNGLTTHMRT---LTGEKPF----GCEKCSRQFRQLSHLKTHIRTHTKEKPYGCGACG 568
Query: 183 FRSASVAGLHYHLK 196
+ + L H++
Sbjct: 569 RQFTRMNSLKSHMR 582
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
C C +G ++SH+RTHTGEKPY C +C+ + + L H++
Sbjct: 151 CEECTRQFSRLGLLKSHMRTHTGEKPYKCEECSRQFSKSGNLKTHMR 197
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
KS +RT + C C + C++ H+RTHTGEKPY+C C + + L H+
Sbjct: 578 KSHMRTHTGEKPYKCEECSRPFTRMNCLKKHMRTHTGEKPYSCEVCDKQFRQLGHLKTHI 637
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 52/146 (35%), Gaps = 31/146 (21%)
Query: 73 TQNHSLCKHCHSQLSHLDLLD------------HCKTCSYMIRPNANNTFSPFCIYCKAV 120
TQ C+ C Q S L LL C+ CS + N K
Sbjct: 145 TQKPCKCEECTRQFSRLGLLKSHMRTHTGEKPYKCEECSRQFSKSGN---------LKTH 195
Query: 121 LSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
+ T+ E C C K +RT + C AC ++ H+RT+
Sbjct: 196 MRTHTGEKPYRCEECDWRFGRLGDLKRRVRTHTGEKPYRCEACGKQFRQFQHLKRHVRTN 255
Query: 171 TGEKPYACGQCAFRSASVAGLHYHLK 196
TGEKPY C +C + L H++
Sbjct: 256 TGEKPYMCEKCGIQFNEPRNLKTHIR 281
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C C + C++ H+RTHTGEKPY C +C+ + L H+
Sbjct: 801 YGCGECGRQFARMNCLKRHMRTHTGEKPYTCEECSRPFGELGHLKTHM 848
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 12/86 (13%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPF-RHK----FVCYACDYFSYNIGCMRSHIR 168
C YC + N ++ + + + P +H+ + C AC + ++ H+R
Sbjct: 19 CYYCSSFQECNAADV-------RRAVSSGPMMKHRCEKPYRCEACGRQFGKLCDLKRHVR 71
Query: 169 THTGEKPYACGQCAFRSASVAGLHYH 194
THTGEKPY C +C + + +A L+ H
Sbjct: 72 THTGEKPYRCEECGRQFSQLADLNSH 97
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 53/132 (40%), Gaps = 22/132 (16%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYC----------KAVLSTNLNE 127
C+ C Q S +D L+ + +R + P+ C C K +T+ NE
Sbjct: 375 CEQCSRQFSRIDNLN------FHLRTHTGE--KPYSCEECNKQFGELGNLKKHKTTHTNE 426
Query: 128 LIEHCRTCKSMIRTDPFRHKFVCYACDYFSYN---IGCMRSHIRTHTGEKPYACGQCAFR 184
C C R P R Y C+ S + + H+ THTGEKP+ C C +
Sbjct: 427 KPYKCEYCSQWFRKTPIRAGEKSYRCEVCSMQFCRLSYRKRHMLTHTGEKPHRCDACGHQ 486
Query: 185 SASVAGLHYHLK 196
+ + L H++
Sbjct: 487 FSRMRDLKTHMR 498
>gi|125347348|ref|NP_808415.2| zinc finger protein 711 [Mus musculus]
Length = 805
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKT 198
+ + F H VC C + ++ H+RTHTGEKPY C CAFR A + L H+K
Sbjct: 542 VHSKSFPH--VCVECGKGFRHPSELKKHMRTHTGEKPYQCQYCAFRCADQSNLKTHIKSK 599
Query: 199 Y 199
+
Sbjct: 600 H 600
>gi|55479|emb|CAA32552.1| unnamed protein product [Mus musculus]
Length = 782
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 56/135 (41%), Gaps = 21/135 (15%)
Query: 70 TIPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFS-PFCIYCKAVLSTNLNE- 127
TI T+ + C C LSH L C + N T FC Y + T LN
Sbjct: 459 TIKTEKTTECDDCRKNLSHAGTL--CTHKTMHTEKGVNKTCKCKFCDY-ETAEQTLLNHH 515
Query: 128 -LIEHCRTCKSMIRTDPFRHKF--VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFR 184
L+ H R KF +C C + ++ HIR HTGEKPY C C ++
Sbjct: 516 LLVVH-------------RKKFPHICGECGKGFRHPSALKKHIRVHTGEKPYECQYCEYK 562
Query: 185 SASVAGLHYHLKKTY 199
SA + L H+K +
Sbjct: 563 SADSSNLKTHIKSKH 577
>gi|260788983|ref|XP_002589528.1| hypothetical protein BRAFLDRAFT_107772 [Branchiostoma floridae]
gi|229274706|gb|EEN45539.1| hypothetical protein BRAFLDRAFT_107772 [Branchiostoma floridae]
Length = 670
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + SH+R HTG+KP+ CG+C +R+ + L H++
Sbjct: 464 MRTHTGEKPYKCDECDYSAAQKSTLDSHLRKHTGDKPFMCGECGYRAVQKSALSIHMR 521
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++VC C Y + N + HIR HTGEKPY C QC + + A L HL
Sbjct: 57 RYVCVDCGYRTANKNDLSRHIRKHTGEKPYKCDQCDYSATLKANLERHL 105
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C CDY + + SH+ HTGEKPY CG+C +R+ L H+++
Sbjct: 325 MRTHTGEKPYKCDQCDYSAARKSSLDSHLLKHTGEKPYMCGECGYRATRRFYLSQHMRR 383
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C CDY + + + +H+ HTGEKPY CG+C +R+ + L H+++
Sbjct: 576 MRTHTGERPYKCDQCDYSAAHKSNLDNHLLKHTGEKPYMCGECGYRTTRKSHLSLHMRR 634
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + SH+ H GEKPY CG+C +R+A + L H++
Sbjct: 278 YKCDQCDYSAARKSSLDSHLLKHAGEKPYMCGECGYRTAVKSHLSRHMR 326
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + SH+ HTG++P+ CG+C +R+A + L H++
Sbjct: 520 MRTHTGEKPYKCDHCDYSASEKATLNSHVAKHTGDEPFMCGECGYRTAVKSRLSKHMR 577
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 16/100 (16%)
Query: 114 CIYCKAVLSTNLNELIEHCRTC------------KSMIRTDPFRHK----FVCYACDYFS 157
C Y A ST + L++H C KS + +H F+C C Y +
Sbjct: 395 CDYSAAQKSTLKSHLLKHAGECYKCDQCDYSAAQKSTLNDHRTKHTGEKLFMCGQCGYRT 454
Query: 158 YNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ H+RTHTGEKPY C +C + +A + L HL+K
Sbjct: 455 VVRSHLSRHMRTHTGEKPYKCDECDYSAAQKSTLDSHLRK 494
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + H+RTHTGEKPY C C + ++ A L+ H+ K
Sbjct: 501 FMCGECGYRAVQKSALSIHMRTHTGEKPYKCDHCDYSASEKATLNSHVAK 550
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C+ C + N N+L H IR + C CDY + + H+ HTG+
Sbjct: 60 CVDC-GYRTANKNDLSRH-------IRKHTGEKPYKCDQCDYSATLKANLERHLLQHTGD 111
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
KPY CG+C R+ + L H++
Sbjct: 112 KPYMCGECGHRTTQQSALAIHMR 134
Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGEKPY C QC + +A + L HL
Sbjct: 306 YMCGECGYRTAVKSHLSRHMRTHTGEKPYKCDQCDYSAARKSSLDSHL 353
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C Y + + H+RTHTGE+PY C QC + +A + L HL
Sbjct: 557 FMCGECGYRTAVKSRLSKHMRTHTGERPYKCDQCDYSAAHKSNLDNHL 604
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+R HTGEKPY C QC + +A + L HL
Sbjct: 362 YMCGECGYRATRRFYLSQHMRRHTGEKPYKCDQCDYSAAQKSTLKSHL 409
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C+Y + + H+RTHTGE Y CGQC + +A + L HL
Sbjct: 198 YMCGECEYKTIQKCDLSRHMRTHTGENLYKCGQCDYSAAQKSTLERHL 245
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HTGEKPY C QC + + + L HL K
Sbjct: 613 YMCGECGYRTTRKSHLSLHMRRHTGEKPYRCDQCDYSATKKSTLKNHLAK 662
Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + SH+ H+ EKP+ C +C FR+A L H+K
Sbjct: 142 YKCDQCDYSAAQKSNLDSHLANHSDEKPFMCEECGFRTAHRRHLSRHMK 190
Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F+C C + + + + H++THT EKPY CG+C +++ L H++
Sbjct: 170 FMCEECGFRTAHRRHLSRHMKTHTAEKPYMCGECEYKTIQKCDLSRHMR 218
Score = 39.7 bits (91), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C + + + H+RTHTG KPY C QC + +A + L HL
Sbjct: 114 YMCGECGHRTTQQSALAIHMRTHTGIKPYKCDQCDYSAAQKSNLDSHL 161
>gi|260781334|ref|XP_002585772.1| hypothetical protein BRAFLDRAFT_111167 [Branchiostoma floridae]
gi|229270813|gb|EEN41783.1| hypothetical protein BRAFLDRAFT_111167 [Branchiostoma floridae]
Length = 1016
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CDY + + H+R HTGEKPY CG+C +R++ + L H++
Sbjct: 957 FKCGQCDYSAVQKSDLVRHLRKHTGEKPYMCGECGYRTSQRSDLSKHMR 1005
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KPY CG+C +R+A A L H+K
Sbjct: 474 MRTHTGEKPYKCDQCDYSAAEQSTLDDHMTKHTGQKPYMCGECGYRTALRASLSRHMK 531
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C CDY + + H+R HTGEKPY CG+C +R+A + L H+
Sbjct: 873 YKCDQCDYSATRKFTLELHLRKHTGEKPYMCGECGYRTAQKSDLSKHM 920
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Query: 111 SPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
+P C+ +V + L L +H +RT + C CDY + + H+ H
Sbjct: 761 NPTCV--GSVGTGQLTTLSKH-------MRTHTGEKPYKCDQCDYSAAQKSTLVIHLAIH 811
Query: 171 TGEKPYACGQCAFRSASVAGLHYHLK 196
TG+KPY C QC +R+A +GL H++
Sbjct: 812 TGDKPYKCDQCGYRTARKSGLSKHMR 837
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CDY + + H+ H GEKPY CG+C +R+ + L H++
Sbjct: 642 MRTHTGEKPFKCDQCDYSATRKSTLHQHVEKHIGEKPYMCGECGYRTNQKSTLSNHMR 699
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY CG+C FR+ L H++
Sbjct: 86 VRTHTGEKPYKCDQCDYSVAHKSNLAQHVLKHTGEKPYMCGECGFRARQKGSLLRHMR 143
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + G + H+RTHTGE+PY C QC + +A L HL+K
Sbjct: 123 YMCGECGFRARQKGSLLRHMRTHTGERPYKCDQCDYSAAEKYNLVEHLRK 172
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C CDY + + H+RTHTGEKPY C QC + A + L H+
Sbjct: 67 YKCDQCDYSALQKSSLSDHVRTHTGEKPYKCDQCDYSVAHKSNLAQHV 114
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 151 YACDYFSYNIGC---MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
Y CD Y C + H+RTHTGEKP+ C QC + + + LH H++K
Sbjct: 623 YMCDECGYRAACKSNLSRHMRTHTGEKPFKCDQCDYSATRKSTLHQHVEK 672
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + +H+RTHTGEKPY C QC + +A L HL K
Sbjct: 679 YMCGECGYRTNQKSTLSNHMRTHTGEKPYKCDQCDYSAAHKFSLDIHLAK 728
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + C CDY + + + H+ HTGEKPY CG+C +R+A + L H+
Sbjct: 698 MRTHTGEKPYKCDQCDYSAAHKFSLDIHLAKHTGEKPYMCGECGYRTAHKSDLTKHV 754
Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C C Y + + H+RTHTGEKPY C QC + +A + L HL
Sbjct: 817 YKCDQCGYRTARKSGLSKHMRTHTGEKPYKCDQCDYSAAHKSSLVIHL 864
Score = 43.1 bits (100), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 121 LSTNLNELIEHCRTC--KSMIRTDPFRH--------KFVCYACDYFSYNIGCMRSHIRTH 170
L+ + E C C ++ +++D RH + C CDY + + H+ H
Sbjct: 390 LAKHTGEKPYMCEECGYRTSLKSDLSRHIRIHTGEKPYKCDQCDYSAAQKFNLVRHLTKH 449
Query: 171 TGEKPYACGQCAFRSASVAGLHYHLK 196
TGEKPY CG+C FR+ + L H++
Sbjct: 450 TGEKPYMCGECGFRTTRKSTLLRHMR 475
Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H+RTHTGEKPY C QC + +A + L H+ K
Sbjct: 455 YMCGECGFRTTRKSTLLRHMRTHTGEKPYKCDQCDYSAAEQSTLDDHMTK 504
Score = 42.7 bits (99), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C CDY + + H+ HTGEKPY C QC + +A L HL K
Sbjct: 334 MRTHTGEKPYKCDQCDYSTGRKFSLEIHLAKHTGEKPYKCDQCDYSAAQKCDLDRHLAK 392
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 14/80 (17%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACD--YFSYNIGCMRSHIRTHT 171
C C + N L+EH +R ++C C Y S+ + H+RTHT
Sbjct: 153 CDQCDYSAAEKYN-LVEH-------LRKHTGEKPYMCGECGKTYKSH----LSKHMRTHT 200
Query: 172 GEKPYACGQCAFRSASVAGL 191
GEKPY C QC + +A + G+
Sbjct: 201 GEKPYKCDQCDYSTAQIKGM 220
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
+RT + C CDY + + H+R HTGEKPY CG+C
Sbjct: 142 MRTHTGERPYKCDQCDYSAAEKYNLVEHLRKHTGEKPYMCGECG 185
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + HIR HTGEKPY C QC + +A L HL K
Sbjct: 399 YMCEECGYRTSLKSDLSRHIRIHTGEKPYKCDQCDYSAAQKFNLVRHLTK 448
Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKPY C +C +R+A + L H++
Sbjct: 595 YKCDQCDYSAARKYHLDLHLARHTGEKPYMCDECGYRAACKSNLSRHMR 643
Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+ THTGEKP+ C QC F + + L HL K
Sbjct: 901 YMCGECGYRTAQKSDLSKHMITHTGEKPFKCNQCDFSTGRKSRLDIHLTK 950
Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKPY C +C +R++ + L H++
Sbjct: 371 YKCDQCDYSAAQKCDLDRHLAKHTGEKPYMCEECGYRTSLKSDLSRHIR 419
Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H++THTGEKPY C C + +A + L H+K+
Sbjct: 511 YMCGECGYRTALRASLSRHMKTHTGEKPYKCDLCDYSAARKSTLSAHVKR 560
Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + H+ HTGEKPY G+C + +A + L HL K
Sbjct: 259 YKCDQCDYAAARKSHLDKHLTKHTGEKPYMAGKCDYSAALKSTLDKHLAK 308
Score = 39.3 bits (90), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C CD+ + + H+ HTG+KP+ CGQC + + + L HL+K
Sbjct: 929 FKCNQCDFSTGRKSRLDIHLTKHTGKKPFKCGQCDYSAVQKSDLVRHLRK 978
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C CDY + + + H+ HTG+KPY C QC + + L HL+K
Sbjct: 836 MRTHTGEKPYKCDQCDYSAAHKSSLVIHLAIHTGDKPYKCDQCDYSATRKFTLELHLRK 894
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + H+ HTG+KPY C QC + +A L HL +
Sbjct: 567 YKCDQCDYSTTQKSSFNIHLARHTGDKPYKCDQCDYSAARKYHLDLHLAR 616
Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 17/101 (16%)
Query: 114 CIYCKAVLSTNLNELIEH-------CRTC--KSMIRTDPFRH--------KFVCYACDYF 156
C Y A ST + + +H C C ++ +R RH + C CDY
Sbjct: 488 CDYSAAEQSTLDDHMTKHTGQKPYMCGECGYRTALRASLSRHMKTHTGEKPYKCDLCDYS 547
Query: 157 SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ + +H++ HTGEK Y C QC + + + + HL +
Sbjct: 548 AARKSTLSAHVKRHTGEKLYKCDQCDYSTTQKSSFNIHLAR 588
>gi|260781336|ref|XP_002585773.1| hypothetical protein BRAFLDRAFT_257351 [Branchiostoma floridae]
gi|229270814|gb|EEN41784.1| hypothetical protein BRAFLDRAFT_257351 [Branchiostoma floridae]
Length = 79
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+RT F C CDY + + H+ HTG+KPY CG+C FR+A A L H
Sbjct: 24 MRTHTGEKPFKCDQCDYSAGRKSSLDRHLMKHTGDKPYMCGECGFRTAQKADLSSH 79
Score = 43.1 bits (100), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKP+ C QC + + + L HL K
Sbjct: 5 YMCGECGYNTAKKSHLSRHMRTHTGEKPFKCDQCDYSAGRKSSLDRHLMK 54
>gi|407262484|ref|XP_003946425.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger Y-chromosomal protein 1
[Mus musculus]
Length = 921
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 56/135 (41%), Gaps = 21/135 (15%)
Query: 70 TIPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFS-PFCIYCKAVLSTNLNE- 127
TI T+ + C C LSH L C + N T FC Y + T LN
Sbjct: 598 TIKTEKTTECDDCRKNLSHAGTL--CTHKTMHTEKGVNKTCKCKFCDY-ETAEQTLLNHH 654
Query: 128 -LIEHCRTCKSMIRTDPFRHKF--VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFR 184
L+ H R KF +C C + ++ HIR HTGEKPY C C ++
Sbjct: 655 LLVVH-------------RKKFPHICGECGKGFRHPSALKKHIRVHTGEKPYECQYCEYK 701
Query: 185 SASVAGLHYHLKKTY 199
SA + L H+K +
Sbjct: 702 SADSSNLKTHIKSKH 716
>gi|348518355|ref|XP_003446697.1| PREDICTED: transcription factor HIVEP2 [Oreochromis niloticus]
Length = 2444
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C+ C ++ HIR+HTGE+PY C C F + + L+ H K H
Sbjct: 196 KYICHYCGRACAKPSVLKKHIRSHTGERPYPCVPCGFSFKTKSNLYKHRKSHAH 249
Score = 44.3 bits (103), Expect = 0.028, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1762 RGKYICEECGIRCKKPSMLKKHIRTHTDIRPYVCKFCNFAFKTKGNLTKHMKSKAH 1817
>gi|260787825|ref|XP_002588952.1| hypothetical protein BRAFLDRAFT_89143 [Branchiostoma floridae]
gi|229274124|gb|EEN44963.1| hypothetical protein BRAFLDRAFT_89143 [Branchiostoma floridae]
Length = 426
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CDY + + H+ HTGEKPY CG+C +R+A + L H++
Sbjct: 169 MRTHTREKSFKCGQCDYSTSRKDTLDQHLAKHTGEKPYMCGECGYRTARKSTLSKHMR 226
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT ++ C CDY + + H HTG+KPY CG+C +R+A + L H+K
Sbjct: 1 MRTHTGEKRYKCDQCDYSAARKSSLDQHQAKHTGQKPYMCGECGYRTAQKSHLSRHMK 58
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG KPY CG+C +R+A + L H++
Sbjct: 225 MRTHTEEKPYKCDQCDYSASRKDSLDQHLAIHTGNKPYMCGECGYRTARKSDLSQHMR 282
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++T + C CDY + + H+ HTG+KPY CG+C +R+A + L H++
Sbjct: 57 MKTHKGEKPYKCDQCDYSAAQKSHLDRHLAKHTGDKPYMCGECGYRTAHKSDLSTHMR 114
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A + L H K
Sbjct: 262 YMCGECGYRTARKSDLSQHMRTHTGEKPYKCDQCDYSAAHKSSLDQHQAK 311
Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H++TH GEKPY C QC + +A + L HL K
Sbjct: 38 YMCGECGYRTAQKSHLSRHMKTHKGEKPYKCDQCDYSAAQKSHLDRHLAK 87
Score = 42.7 bits (99), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTG+KPY CG+C +R+ + L H++
Sbjct: 374 YKCDRCDYSAALKSALNKHLAKHTGDKPYMCGECGYRTTQKSNLANHMR 422
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTG+KPY CG+C +R+A + L H++
Sbjct: 122 YRCDQCDYSATRKCHLDQHLAIHTGDKPYMCGECEYRTAWESQLSRHMR 170
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + H HTG+KPY CG+C + + + L H++
Sbjct: 281 MRTHTGEKPYKCDQCDYSAAHKSSLDQHQAKHTGQKPYMCGECGYSTVQKSHLSQHMR 338
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHT EKPY C QC + ++ L HL
Sbjct: 206 YMCGECGYRTARKSTLSKHMRTHTEEKPYKCDQCDYSASRKDSLDQHL 253
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + + H+ HTG KPY C +C + +A + L+ HL K
Sbjct: 346 YKCDQCDYSAVHKNSLAQHVAKHTGVKPYKCDRCDYSAALKSALNKHLAK 395
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C+Y + + H+RTHT EK + CGQC + ++ L HL K
Sbjct: 150 YMCGECEYRTAWESQLSRHMRTHTREKSFKCGQCDYSTSRKDTLDQHLAK 199
>gi|71834474|ref|NP_001025335.1| human immunodeficiency virus type I enhancer binding protein 2
[Danio rerio]
Length = 2298
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C+ C ++ HIR+HTGE+PY C C F + + L+ H K H
Sbjct: 182 KYICHYCGRACAKPSVLKKHIRSHTGERPYPCVPCGFSFKTKSNLYKHRKSHAH 235
Score = 44.7 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1687 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYVCKFCNFAFKTKGNLTKHMKSKAH 1742
>gi|410055354|ref|XP_003953828.1| PREDICTED: transcriptional repressor CTCFL [Pan troglodytes]
Length = 700
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H +T K+ +F C C Y M +HIRTHTGE
Sbjct: 460 CRYCPAVFHERY-ALIQHQKTHKN-------EKRFKCKHCSYACKQERHMTAHIRTHTGE 511
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KP+ C C FR + H+ + YH
Sbjct: 512 KPFTCLSCNKCFRQKQLLNAHF---RKYH 537
Score = 49.3 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 324 TSGELVRHTRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 383
Query: 190 GLHYHLK 196
L H++
Sbjct: 384 KLKRHMR 390
Score = 44.3 bits (103), Expect = 0.032, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +R+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 358 KRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEKPYECHICHTRFTQSGTMKIHI 417
Score = 40.0 bits (92), Expect = 0.54, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 130 EHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSAS 187
E R+ K+ +T + F C C + S + H++THT EKP+ C C FR+ +
Sbjct: 239 EKARSTKNQRKTKGAKQTFHCDVCMFTSSRMSSFNRHMKTHTNEKPHLCHLCLKTFRTVT 298
Query: 188 VAGLH 192
+ H
Sbjct: 299 LLRNH 303
Score = 36.2 bits (82), Expect = 8.6, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKTY 199
+C+ C + +R+H+ THTG +PY C C AF ++ H K T+
Sbjct: 286 LCHLCLKTFRTVTLLRNHVNTHTGTRPYKCNDCNMAFVTSGELVRHTRYKHTH 338
>gi|260795647|ref|XP_002592816.1| hypothetical protein BRAFLDRAFT_201591 [Branchiostoma floridae]
gi|229278040|gb|EEN48827.1| hypothetical protein BRAFLDRAFT_201591 [Branchiostoma floridae]
Length = 480
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
KS +RT + C C +G +++H+R HTGEKPY CG+C+ + + ++ L H+
Sbjct: 303 KSHMRTHTGEKPYKCEECSRQFSQLGHLKTHVRAHTGEKPYQCGECSRQFSELSNLERHM 362
Query: 196 K 196
+
Sbjct: 363 R 363
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 19/120 (15%)
Query: 79 CKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
C+ C Q SHL D H +T + P+ C C S L L +H
Sbjct: 121 CEECSKQFSHLGDFKKHMRT---------HTGEKPYKCEECSRQFS-QLGSLKKH----- 165
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C +G ++ H RTHTGEKPY C +C+ + + + L H++
Sbjct: 166 --MRTHTGEKPYKCEECSRQFNQLGHLKKHTRTHTGEKPYKCEECSKQFSELGALKTHMR 223
Score = 42.4 bits (98), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C Q SH++ L ++M + C C S + I H RT
Sbjct: 373 CEECSRQFSHMENLK-----THMRTHTGEKPYK--CEECSRQFSKQGHLKI-HKRT---H 421
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C C +G + H+RTHTGEKPY+C +C+ + + ++ L H++
Sbjct: 422 TGEKPYR----CEECSRQFSELGHLNKHMRTHTGEKPYSCEKCSRQFSHLSNLKKHMR 475
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C +G +++H+ THTGEKPY C +C+ + + + L H+
Sbjct: 19 KTHMRTHTGEKPYKCEECSRQFRQLGDLKNHLLTHTGEKPYRCEECSRQFSRLGDLKTHM 78
Query: 196 K 196
+
Sbjct: 79 R 79
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C +G +++H+RTHTGEKPY C +C+ + + L H++
Sbjct: 59 YRCEECSRQFSRLGDLKTHMRTHTGEKPYRCEECSRQFNQLGHLKTHMR 107
Score = 39.3 bits (90), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 48/119 (40%), Gaps = 15/119 (12%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKS 137
+C+ C Q S L L S+M + C C S L L K+
Sbjct: 288 MCEKCSRQFSQLGALK-----SHMRTHTGEKPYK--CEECSRQFS-QLGHL-------KT 332
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+R + C C + + H+RTHTGEKPY C +C+ + + + L H++
Sbjct: 333 HVRAHTGEKPYQCGECSRQFSELSNLERHMRTHTGEKPYRCEECSRQFSHMENLKTHMR 391
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C C + +++H+RTHTGEKPY C +C+ + + L HL
Sbjct: 3 YKCEECSKPFRQLCNLKTHMRTHTGEKPYKCEECSRQFRQLGDLKNHL 50
Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTG----EKPYACGQCAFRSASVAGL 191
K+ +RT + C C +G +++H+RTHTG EKPY C +C+ + + +
Sbjct: 75 KTHMRTHTGEKPYRCEECSRQFNQLGHLKTHMRTHTGETLCEKPYRCEECSKQFSHLGDF 134
Query: 192 HYHLK 196
H++
Sbjct: 135 KKHMR 139
>gi|390347840|ref|XP_003726878.1| PREDICTED: zinc finger protein 99-like [Strongylocentrotus
purpuratus]
Length = 757
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 16/111 (14%)
Query: 94 HCKTCSYMIRPNAN-------NTFSP--FCIYCKAVLSTNLNELIEHCRTCKSMIRTDPF 144
HC+TC + N ++ P C C V + ++ L+ H +T + ++
Sbjct: 399 HCETCKKEFKSKGNLSRHELTHSEKPTTVCEICDKVFQS-IHTLLTHKKTVHNELKP--- 454
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
FVC C +G M++H RTHTGEKP+ C +C A + L H+
Sbjct: 455 ---FVCDICHKDFKQLGNMKTHRRTHTGEKPFVCQECGRAFAQMGNLQAHM 502
Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C + H RTHTGEKPY C QC +++ L H +K
Sbjct: 596 YSCQVCGKGFVWFKSFQLHKRTHTGEKPYTCDQCDKAFSNINSLKNHKQK 645
>gi|260781005|ref|XP_002585619.1| hypothetical protein BRAFLDRAFT_111659 [Branchiostoma floridae]
gi|229270637|gb|EEN41630.1| hypothetical protein BRAFLDRAFT_111659 [Branchiostoma floridae]
Length = 382
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+R HTGEKPY CG+C +R+A + L H++
Sbjct: 281 MRTHTGEKPYKCDQCDYSAAEKYNLVEHLRKHTGEKPYMCGECGYRTAHKSNLSAHMR 338
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++T F C CDY + + H+RTHTGEKPY C QC + A + L HL
Sbjct: 141 MKTHSGEKPFKCDQCDYSALQKSSLSDHVRTHTGEKPYKCDQCDYSVAHKSNLAQHL 197
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
+RT + C CDY + + H+R HTGEKPY CG+C FR+A
Sbjct: 225 MRTHTGEKPYKCDQCDYSAAEKYNLVEHLRKHTGEKPYMCGECGFRAA 272
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C C + N L+EH +R ++C C + + + +H+RTHTGE
Sbjct: 236 CDQCDYSAAEKYN-LVEH-------LRKHTGEKPYMCGECGFRAAHKSNSIAHMRTHTGE 287
Query: 174 KPYACGQCAFRSASVAGLHYHLKK 197
KPY C QC + +A L HL+K
Sbjct: 288 KPYKCDQCDYSAAEKYNLVEHLRK 311
Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + C+ H++ H+GEKPY C QC + + L +HL K
Sbjct: 66 YMCGECGYRAGLKSCLTKHMKIHSGEKPYKCDQCDYSAVQKTSLDFHLAK 115
Score = 43.1 bits (100), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKPY CG+C +R+ + L H+K
Sbjct: 38 YKCNHCDYSAARKSSLDLHLTKHTGEKPYMCGECGYRAGLKSCLTKHMK 86
Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C CDY + + H+R HTGEKPY C C + +A + L HL K
Sbjct: 1 MRTHTAEKPYKCGQCDYAAKWKSDLSIHLRIHTGEKPYKCNHCDYSAARKSSLDLHLTK 59
Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ TGEKPY CG+C +R+ + L H+K
Sbjct: 94 YKCDQCDYSAVQKTSLDFHLAKDTGEKPYICGECGYRAGLKSSLLKHMK 142
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C C + N L+EH +R ++C C Y + + + +H+RTHTGE
Sbjct: 292 CDQCDYSAAEKYN-LVEH-------LRKHTGEKPYMCGECGYRTAHKSNLSAHMRTHTGE 343
Query: 174 KPYACGQCAFRSASVAGLHYHLKK 197
KP C +C + + + L H+ K
Sbjct: 344 KPNKCDKCDYSTIPKSHLDQHMMK 367
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ D ++C C Y + + H++TH+GEKP+ C QC + + + L H++
Sbjct: 113 LAKDTGEKPYICGECGYRAGLKSSLLKHMKTHSGEKPFKCDQCDYSALQKSSLSDHVR 170
>gi|194893568|ref|XP_001977901.1| GG19296 [Drosophila erecta]
gi|190649550|gb|EDV46828.1| GG19296 [Drosophila erecta]
Length = 465
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
FVC +C Y N +R HIR+HTGE+P+ C C R S +GL H+
Sbjct: 352 FVCESCGYSCRNKETLRVHIRSHTGERPFGCQVCGKRFPSHSGLREHM 399
>gi|432848864|ref|XP_004066489.1| PREDICTED: zinc finger protein 658-like [Oryzias latipes]
Length = 792
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 40/141 (28%), Positives = 58/141 (41%), Gaps = 31/141 (21%)
Query: 78 LCKHCHSQLSHLDLL-DHCKTCSYMIRPNANNTFSPF-CIYC----------KAVLSTNL 125
C CH S + +L H +T + PF C C K ++T+
Sbjct: 268 FCLQCHQSFSQISILRTHVRT---------HTGEKPFACQECDKSFNEKSSLKKHMTTHT 318
Query: 126 NELIEHCRTC------KSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKP 175
E C+ C KS++RT H F C C+ +R H+RTHTGEKP
Sbjct: 319 GEKPFACQDCDQRFSRKSVLRTHMRIHTGEKPFACKECNKLFRETSYLRKHMRTHTGEKP 378
Query: 176 YACGQCAFRSASVAGLHYHLK 196
+AC C R + + L H++
Sbjct: 379 FACQDCNQRFSRRSVLKAHMR 399
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 113 FCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTG 172
FC+ C S I + RT +RT F C CD +R H+ THTG
Sbjct: 685 FCLQCHQSFSQ-----ISNLRT---HVRTHTGEKPFACKECDKSFSEKSSLRKHMTTHTG 736
Query: 173 EKPYACGQCAFRSASVAGLHYHLK 196
EKP+AC C R + + L H++
Sbjct: 737 EKPFACQDCDQRFSRKSVLRTHMR 760
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
T + +RT F C C I +R+H+RTHTGEKP+AC +C
Sbjct: 253 TLRRHMRTHTGERPFFCLQCHQSFSQISILRTHVRTHTGEKPFACQEC 300
Score = 45.8 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F C C I +R+H+RTHTGEKP+AC +C + + L H+
Sbjct: 684 FFCLQCHQSFSQISNLRTHVRTHTGEKPFACKECDKSFSEKSSLRKHM 731
Score = 42.4 bits (98), Expect = 0.094, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 28/56 (50%)
Query: 126 NELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
N+L + +RT F C C+ +++H+R HTGEKP+AC +C
Sbjct: 357 NKLFRETSYLRKHMRTHTGEKPFACQDCNQRFSRRSVLKAHMRIHTGEKPFACTEC 412
Score = 39.7 bits (91), Expect = 0.69, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C + +R H+RTHTGE+P+ C QC + ++ L H++
Sbjct: 239 FFCKECFKCFRDSSTLRRHMRTHTGERPFFCLQCHQSFSQISILRTHVR 287
Score = 37.7 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C +R H+ THTGE+P+ C QC + ++ L H++
Sbjct: 656 FFCKECFKCFRESSSLRRHMMTHTGERPFFCLQCHQSFSQISNLRTHVR 704
Score = 36.6 bits (83), Expect = 6.6, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 133 RTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSAS 187
R +R++ F C C + +++H R HTGEKP+ C +C FR +S
Sbjct: 613 RNASVHVRSNSGDKPFTCEECCKSFRRLCHLKTHRRIHTGEKPFFCKECFKCFRESS 669
>gi|261289701|ref|XP_002604827.1| hypothetical protein BRAFLDRAFT_206423 [Branchiostoma floridae]
gi|229290155|gb|EEN60837.1| hypothetical protein BRAFLDRAFT_206423 [Branchiostoma floridae]
Length = 229
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
I+T +F C CD+ + +RSH+ HTGEKPY C +C FR+A L H+
Sbjct: 81 IQTHTGEKQFKCSECDFRTARSASLRSHMLKHTGEKPYVCEECGFRAAYRGCLQKHI 137
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+VC C + + GC++ HI THTGEKP+ C C +RSA + + H
Sbjct: 118 YVCEECGFRAAYRGCLQKHIMTHTGEKPFKCSHCDYRSAQMNAVKKH 164
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+I TD + C CDY + G + +HI HTG KP+ACG C++R+ + + L H++
Sbjct: 23 ELIHTDYRPRPYKCPHCDYAAMAKGTLATHIARHTGHKPFACGDCSYRAVTKSLLERHIQ 82
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+++C C Y + N M H TH+GEKPY C C + S + + L H+ +
Sbjct: 173 RYLCDQCGYRTSNTSNMTKHKMTHSGEKPYRCDACGYSSNNRSNLKTHMNQ 223
Score = 39.7 bits (91), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
F C CDY S + ++ H HTG K Y C QC +R+++ + + H
Sbjct: 146 FKCSHCDYRSAQMNAVKKHEAIHTGNKRYLCDQCGYRTSNTSNMTKH 192
>gi|598332|gb|AAA56845.1| zinc finger protein [Mus musculus]
Length = 783
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 56/135 (41%), Gaps = 21/135 (15%)
Query: 70 TIPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFS-PFCIYCKAVLSTNLNE- 127
TI T+ + C C LSH L C + N T FC Y + T LN
Sbjct: 459 TIKTEKTTECDDCRKNLSHAGTL--CTHKTMHTEKGVNKTCKCKFCDY-ETAEQTLLNHH 515
Query: 128 -LIEHCRTCKSMIRTDPFRHKF--VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFR 184
L+ H R KF +C C + ++ HIR HTGEKPY C C ++
Sbjct: 516 LLVVH-------------RKKFPHICGECGKGFRHPSALKKHIRVHTGEKPYECQYCEYK 562
Query: 185 SASVAGLHYHLKKTY 199
SA + L H+K +
Sbjct: 563 SADSSNLKTHIKSKH 577
>gi|260795615|ref|XP_002592800.1| hypothetical protein BRAFLDRAFT_171333 [Branchiostoma floridae]
gi|229278024|gb|EEN48811.1| hypothetical protein BRAFLDRAFT_171333 [Branchiostoma floridae]
Length = 167
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 19/120 (15%)
Query: 79 CKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
C+ C Q SHL +L H +T + P+ C C S L++L H RT K
Sbjct: 7 CEECSKQFSHLCNLKAHVRT---------HTGEKPYKCEECSKQFS-QLSDLKTHMRTHK 56
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C C +G ++ H+RTHTGEKPY C +C+ + + + L H++
Sbjct: 57 G---EKPYR----CEECSKQFSQLGALKIHMRTHTGEKPYRCEECSRQFSELGKLKRHMR 109
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 51/119 (42%), Gaps = 17/119 (14%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKS 137
C+ C Q S L L I + P+ C C S L +L H RT
Sbjct: 63 CEECSKQFSQLGALK--------IHMRTHTGEKPYRCEECSRQFS-ELGKLKRHMRT--- 110
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C C +G ++SH+RTHTGEKPY C C+ + + + L H++
Sbjct: 111 HTGEKPYR----CEECSRQFSELGKLKSHMRTHTGEKPYRCEVCSKQFSRLGNLKRHMR 165
>gi|351711600|gb|EHB14519.1| Zinc finger protein 513 [Heterocephalus glaber]
Length = 633
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 34/77 (44%), Gaps = 10/77 (12%)
Query: 128 LIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA 177
L+ CR C K ++T F C C Y S + + H RTHTGEKPY
Sbjct: 277 LLYSCRLCAFVSHYSSHLKRHMQTHSGEKPFRCGRCPYASAQLVNLTRHTRTHTGEKPYR 336
Query: 178 CGQCAFRSASVAGLHYH 194
C C F +S+ L H
Sbjct: 337 CPHCPFACSSLGNLRRH 353
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 143 PFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P R + C C + S+ ++ H++TH+GEKP+ CG+C + SA + L H +
Sbjct: 274 PPRLLYSCRLCAFVSHYSSHLKRHMQTHSGEKPFRCGRCPYASAQLVNLTRHTR 327
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 7/69 (10%)
Query: 126 NELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
N L H +T PFR C C Y S ++ ++ H R HTGEKPY C C +
Sbjct: 496 NHLARHMKTHSG---EKPFR----CARCPYASAHLDNLKRHQRVHTGEKPYKCPLCPYAC 548
Query: 186 ASVAGLHYH 194
++A L H
Sbjct: 549 GNLANLKRH 557
Score = 42.7 bits (99), Expect = 0.077, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
F C C + ++ + H++TH+GEKP+ C +C + SA + L H
Sbjct: 483 FACSLCPFATHYPNHLARHMKTHSGEKPFRCARCPYASAHLDNLKRH 529
Score = 41.2 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 43/118 (36%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C C +HLD L + +P P C Y NL L H R
Sbjct: 513 CARCPYASAHLDNLKRHQRVHTGEKPYK----CPLCPYA----CGNLANLKRHGRIHSG- 563
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
PFR C C+Y ++ H+ HTGEKP+ C CA+ + H K
Sbjct: 564 --DKPFR----CSLCNYSCNQSMNLKRHMLRHTGEKPFRCATCAYTTGHWDNYKRHQK 615
>gi|308191620|sp|A2ANX9.1|ZN711_MOUSE RecName: Full=Zinc finger protein 711
Length = 761
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKT 198
+ + F H VC C + ++ H+RTHTGEKPY C CAFR A + L H+K
Sbjct: 498 VHSKSFPH--VCVECGKGFRHPSELKKHMRTHTGEKPYQCQYCAFRCADQSNLKTHIKSK 555
Query: 199 Y 199
+
Sbjct: 556 H 556
>gi|392334428|ref|XP_001074445.3| PREDICTED: zinc finger protein 827 [Rattus norvegicus]
Length = 1305
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 57/138 (41%), Gaps = 20/138 (14%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCK---AVLSTNLN---ELIEHC 132
C CH + + L K C + PFCIY A + +L ++ C
Sbjct: 1005 CDVCHKFMKTPEQLLEHKKCHTV---PTGGLKCPFCIYSTNRPAAMECHLKTHYKMEYKC 1061
Query: 133 RTCKSM------IRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
R C+++ + T H+ + C C Y S + H+R HTGE+P+ C QC+
Sbjct: 1062 RICQTVKANQLELETHTREHRLGNHYKCDQCGYLSKTANKLIEHVRVHTGERPFHCDQCS 1121
Query: 183 FRSASVAGLHYHLKKTYH 200
+ L+ H KK H
Sbjct: 1122 YSCKRKDNLNLH-KKLKH 1138
>gi|260808223|ref|XP_002598907.1| hypothetical protein BRAFLDRAFT_250821 [Branchiostoma floridae]
gi|229284182|gb|EEN54919.1| hypothetical protein BRAFLDRAFT_250821 [Branchiostoma floridae]
Length = 635
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 17/100 (17%)
Query: 114 CIYCKAVLSTNLNELIEH-------CRTC--KSMIRTDPFRH--------KFVCYACDYF 156
C Y A ST L +H C C ++ + D FRH F C CDY
Sbjct: 89 CDYSAARKSTLDQHLTKHTSKKPYMCGECGYRTARKPDLFRHLRIHTGEKPFKCDQCDYS 148
Query: 157 SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ + H+ HTGEKPY CG+C +R+A + L H++
Sbjct: 149 AAQKWDLDKHVTIHTGEKPYMCGECGYRAARKSTLSEHMR 188
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C HC +H LDH ++ + + C C +TN ++L H RT S
Sbjct: 345 CDHCDYSAAHKSSLDH-----HLAKHTGEKPY--MCEEC-GYRTTNKSDLSRHMRTHTS- 395
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P++ C CDY + + H+ HTG+KPY CG+C +R+ L H++
Sbjct: 396 --EKPYK----CDQCDYSAARKFDLDRHVTKHTGDKPYMCGECGYRTTHKFDLSRHMR 447
Score = 49.3 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 48/120 (40%), Gaps = 24/120 (20%)
Query: 79 CKHCHSQLSHLD--LLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCK 136
C + +Q H D LL H YM C C A L+E
Sbjct: 458 CDYSAAQKDHFDIHLLKHAGEKPYM------------CGECGAARKYTLSE--------- 496
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H HTGEKPY CG+C +R+A + L H++
Sbjct: 497 -HMRTHTGEKPYKCDQCDYATVRKSDLDKHFTKHTGEKPYMCGECGYRAAITSDLSRHMR 555
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C +C + +A + LH HL +
Sbjct: 168 YMCGECGYRAARKSTLSEHMRTHTGEKPYKCEECNYSAAQKSTLHKHLAR 217
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RT + C CDY + + H+ HTGEKPY CG+C +R+A + L H++
Sbjct: 20 RTHTSEKPYKCDQCDYSAAQKSHLDYHVTKHTGEKPYMCGECGYRAAKKSHLSRHMR 76
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+RTHTGEKPY C C + +A + L +HL K
Sbjct: 315 YMCGECGYRTTHKSNLSKHMRTHTGEKPYKCDHCDYSAAHKSSLDHHLAK 364
Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGEKPY C QC + +A + L +H+
Sbjct: 535 YMCGECGYRAAITSDLSRHMRTHTGEKPYKCNQCDYSAAQKSSLDWHI 582
Score = 45.1 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 33/66 (50%)
Query: 131 HCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAG 190
H +RT + C CDY + + + H+ HTGEKPY C +C +R+ + +
Sbjct: 326 HKSNLSKHMRTHTGEKPYKCDHCDYSAAHKSSLDHHLAKHTGEKPYMCEECGYRTTNKSD 385
Query: 191 LHYHLK 196
L H++
Sbjct: 386 LSRHMR 391
Score = 45.1 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + +R H+RTHTGEKPY C QC + +A L HL K
Sbjct: 259 YMCGECGFQVRYPSDLRRHMRTHTGEKPYKCDQCDYSAAQKCHLDLHLAK 308
Score = 45.1 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HT +KPY CG+C +R+A L HL+
Sbjct: 75 MRTHTGEKPYKCDHCDYSAARKSTLDQHLTKHTSKKPYMCGECGYRTARKPDLFRHLR 132
Score = 44.7 bits (104), Expect = 0.021, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C C + +A + L HL K
Sbjct: 56 YMCGECGYRAAKKSHLSRHMRTHTGEKPYKCDHCDYSAARKSTLDQHLTK 105
Score = 44.3 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + N + H+RTHT EKPY C QC + +A L H+ K
Sbjct: 371 YMCEECGYRTTNKSDLSRHMRTHTSEKPYKCDQCDYSAARKFDLDRHVTK 420
Score = 44.3 bits (103), Expect = 0.030, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C Y A ST L H + + P++ C CDY + + H+ HTGE
Sbjct: 201 CNYSAAQKSTLHKHLARHKKPYITHTGEKPYK----CDQCDYSAAIKSKLDKHLAKHTGE 256
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
KPY CG+C F+ + L H++
Sbjct: 257 KPYMCGECGFQVRYPSDLRRHMR 279
Score = 43.5 bits (101), Expect = 0.052, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + HI HTG+KPY CG+C +R+A + L H++
Sbjct: 554 MRTHTGEKPYKCNQCDYSAAQKSSLDWHIAAKHTGDKPYMCGECGYRAAQKSHLAEHMR 612
Score = 41.6 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C + + + H RTHT EKPY C QC + +A + L YH+ K
Sbjct: 1 MCGECGFRTKQKSDLTIHKRTHTSEKPYKCDQCDYSAAQKSHLDYHVTK 49
Score = 41.2 bits (95), Expect = 0.24, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+K Y CG+C +R+ + L H++
Sbjct: 278 MRTHTGEKPYKCDQCDYSAAQKCHLDLHLAKHTGDKAYMCGECGYRTTHKSNLSKHMR 335
Score = 40.0 bits (92), Expect = 0.52, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIR-------THTGEKPYACGQCAFRSA 186
T +RT + C C+Y + + H+ THTGEKPY C QC + +A
Sbjct: 182 TLSEHMRTHTGEKPYKCEECNYSAAQKSTLHKHLARHKKPYITHTGEKPYKCDQCDYSAA 241
Query: 187 SVAGLHYHLKK 197
+ L HL K
Sbjct: 242 IKSKLDKHLAK 252
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ H+RTHTGEKPY C QC + + + L H K
Sbjct: 494 LSEHMRTHTGEKPYKCDQCDYATVRKSDLDKHFTK 528
Score = 36.2 bits (82), Expect = 8.0, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
++C C Y + + H+RT TGEKP+ C QC + + + L
Sbjct: 592 YMCGECGYRAAQKSHLAEHMRTRTGEKPFKCDQCDYSAGRKSTL 635
>gi|327291330|ref|XP_003230374.1| PREDICTED: histone-lysine N-methyltransferase PRDM9-like, partial
[Anolis carolinensis]
Length = 357
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 10/84 (11%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDY-FSYNIGCMRSHIRTHTG 172
C+ C + N N L+ H +RT +VC C Y F+++ G +RSH+RTHTG
Sbjct: 175 CLECAKSFTENGN-LLRH-------LRTHTGEKPYVCLECGYSFAHSSG-LRSHLRTHTG 225
Query: 173 EKPYACGQCAFRSASVAGLHYHLK 196
EKPY C +C +GL H +
Sbjct: 226 EKPYKCLECGKSFTLSSGLRSHQR 249
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 10/84 (11%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC-DYFSYNIGCMRSHIRTHTG 172
C+ C + N N L+ H +RT +VC C + F+++ G +RSH RTHTG
Sbjct: 63 CLECGKSFTENGN-LLRH-------LRTHTGEKPYVCLECGNSFTHSSG-LRSHQRTHTG 113
Query: 173 EKPYACGQCAFRSASVAGLHYHLK 196
EKPY C +C L HL+
Sbjct: 114 EKPYTCLECGKNFTESGSLRSHLR 137
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 28/61 (45%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+S RT + C C G +RSH+R HTGEKPY C +C LH H
Sbjct: 105 RSHQRTHTGEKPYTCLECGKNFTESGSLRSHLRIHTGEKPYKCLECGKSFTESGNLHKHQ 164
Query: 196 K 196
+
Sbjct: 165 R 165
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 148 FVCYAC-DYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C F+ N +R H+RTHTGEKPY C +C + A +GL HL+
Sbjct: 173 YTCLECAKSFTENGNLLR-HLRTHTGEKPYVCLECGYSFAHSSGLRSHLR 221
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 27/61 (44%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K RT + C C G + H+RTHTGEKPY C +C +GL H
Sbjct: 49 KKEGRTHTGERPYTCLECGKSFTENGNLLRHLRTHTGEKPYVCLECGNSFTHSSGLRSHQ 108
Query: 196 K 196
+
Sbjct: 109 R 109
Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 24/51 (47%)
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
C + S RT + C C + +R H RTHTGEKPY C +C
Sbjct: 297 CSSLHSHRRTHAGEKSYTCLECGQSFTHSSSLRLHQRTHTGEKPYKCLECG 347
Score = 36.2 bits (82), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 148 FVCYACDYFSYNIGC-MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C S+N+ +RSH R HTGEKPY C +C + LH H +
Sbjct: 257 YKCLECGK-SFNLSSILRSHQRIHTGEKPYTCLECGQSFTQCSSLHSHRR 305
>gi|260781147|ref|XP_002585684.1| hypothetical protein BRAFLDRAFT_111537 [Branchiostoma floridae]
gi|229270714|gb|EEN41695.1| hypothetical protein BRAFLDRAFT_111537 [Branchiostoma floridae]
Length = 613
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C CD+ + C+ H+RTHTGEKPY C QC + +A L H K+
Sbjct: 551 YMCGECDFRTSRRPCLTRHMRTHTGEKPYKCDQCDYSAAQKGTLDKHRKQ 600
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + G + H+ HTGEKPY CG+C FR++ L H++
Sbjct: 514 MRTHTGEKPYKCDQCDYSAAQKGELDYHVANHTGEKPYMCGECDFRTSRRPCLTRHMR 571
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 10/118 (8%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C C +H LD S++++ N P+ + ++L + RT +
Sbjct: 352 CDQCDYSAAHKLSLDQHAVGSHVMK---NTGEKPYTCGEDGYRTAPNDQLAKQTRT---L 405
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P++ C CDY + + H+R HTGEKPY C +C +R+A + +H+K
Sbjct: 406 TEEKPYK----CDHCDYSAAVKYALVQHLRKHTGEKPYMCDKCGYRTAKKSYFTFHMK 459
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + C C Y + + H+RTHTGE+PY C QC + ++ + L +H+K
Sbjct: 261 RKPYNCGECGYKAARKSELSRHMRTHTGERPYKCDQCDYSASVKSSLDHHIK 312
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CDY + + H HTG KPY CG+C +++A + L H++
Sbjct: 236 FKCDQCDYSALTKSKLHQHQSKHTGRKPYNCGECGYKAARKSELSRHMR 284
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+++C C Y + + + H RTHTGEKP+ C QC + ++ L HL K
Sbjct: 151 RYMCEKCGYRTTHKTHLSRHFRTHTGEKPHRCDQCDYSASEKRSLEIHLAK 201
Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 119 AVLSTNLNE--LIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY 176
A NL + L +H K R P++ C CD+ + G + H+ THTGE+PY
Sbjct: 73 ATQKQNLKQHRLYKHTAVEKGPTREKPYK----CDQCDFSAAAKGNLDQHVATHTGERPY 128
Query: 177 ACGQ 180
CG+
Sbjct: 129 MCGE 132
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H++THTGEKP+ C QC + + + + LH H K
Sbjct: 208 YMCEKCGYRTAEKSYLFLHLKTHTGEKPFKCDQCDYSALTKSKLHQHQSK 257
Score = 39.3 bits (90), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
C CDY + + H+ H G+KPY C +C +R+A + L HLK
Sbjct: 182 CDQCDYSASEKRSLEIHLAKHNGDKPYMCEKCGYRTAEKSYLFLHLK 228
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACG--QCAFRSASVAGLHYHLK 196
+RT + C CDY + + HI+ HTG+KPY C +C +R+A + L H++
Sbjct: 283 MRTHTGERPYKCDQCDYSASVKSSLDHHIKIHTGDKPYMCSYRECGYRTAKKSYLPKHMR 342
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 23/42 (54%)
Query: 153 CDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
C Y + + H+RTHTGEKPY C QC + +A L H
Sbjct: 327 CGYRTAKKSYLPKHMRTHTGEKPYKCDQCDYSAAHKLSLDQH 368
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 23/47 (48%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + HIR HTGE+PY C QC + + L H
Sbjct: 36 YMCRECGYRTAKKFNFSQHIRIHTGERPYKCDQCEYSATQKQNLKQH 82
>gi|432958646|ref|XP_004086087.1| PREDICTED: oocyte zinc finger protein XlCOF6-like [Oryzias latipes]
Length = 339
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CD + +++HIRTHTGEKP++C +C R + ++ L H++
Sbjct: 252 MRTHTGEKPFSCTECDKRFSQLSNLKNHIRTHTGEKPFSCTECDKRFSEMSSLKKHMR 309
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 18/113 (15%)
Query: 84 SQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDP 143
SQ SHL S+M N FS C+ C S H T K +RT
Sbjct: 75 SQTSHLK--------SHMRSHTGENPFS--CVECDKRFS--------HVFTLKKHMRTHT 116
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CD ++ ++ H+RTHTGEKP++C +C R + + L L+
Sbjct: 117 GEKLFSCIECDKRFSHVFTLKKHMRTHTGEKPFSCVECDKRFSDSSSLQKSLR 169
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ IRT F C CD + ++ H+RTHTGEKP++C C + + L H+
Sbjct: 277 KNHIRTHTGEKPFSCTECDKRFSEMSSLKKHMRTHTGEKPFSCKVCKKKFNQTSSLKTHM 336
Query: 196 K 196
K
Sbjct: 337 K 337
Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT F C CD ++ H+RTHTGEKP++C +C + + L H+
Sbjct: 193 KTHMRTHTGEKPFSCKECDKSFSEKSKLKIHMRTHTGEKPFSCKECDKSFSEKSKLKIHM 252
Query: 196 K 196
+
Sbjct: 253 R 253
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CD ++SH+R+HTGE P++C +C R + V L H++
Sbjct: 65 FSCIECDKSFSQTSHLKSHMRSHTGENPFSCVECDKRFSHVFTLKKHMR 113
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 8/83 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
CI C S H T K +RT F C CD + ++ +RTHTGE
Sbjct: 123 CIECDKRFS--------HVFTLKKHMRTHTGEKPFSCVECDKRFSDSSSLQKSLRTHTGE 174
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
KP++C +C + V L H++
Sbjct: 175 KPFSCKKCNKSFSFVFNLKTHMR 197
>gi|260832634|ref|XP_002611262.1| hypothetical protein BRAFLDRAFT_71217 [Branchiostoma floridae]
gi|229296633|gb|EEN67272.1| hypothetical protein BRAFLDRAFT_71217 [Branchiostoma floridae]
Length = 520
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + G + H+ HTGEKPY CG+C +R+A L H++
Sbjct: 328 YQCDQCDYSTARKGNLDRHMANHTGEKPYMCGECGYRAAEKYSLTVHMR 376
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+F C C Y + ++ + +H+RTHTG+KPY C QC + +A L H
Sbjct: 243 RFTCVECGYRTAHMSNLSAHMRTHTGDKPYKCDQCDYSTAQKGNLDRH 290
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C CDY + G + H+ THT +KPY CG+C SA + L H+++
Sbjct: 151 VRTHTDEKPYKCDQCDYSAARKGNLDRHMTTHTEDKPYMCGECGHTSADRSALTVHMRR 209
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+FVC CD+ + + H R HTGE+PY C QC + +A L +H+ K
Sbjct: 75 RFVCTECDFRAAKKSELLRHTRKHTGEEPYNCDQCDYSAAHKVSLDFHITK 125
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+R+ ++C C+Y + + SH+ HTGEKPY C +C +R+A + L H++
Sbjct: 431 MRSHTGEKPYICDQCNYSAAKKSDLDSHMARHTGEKPYMCEECGYRTAHRSNLTAHMR 488
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F C C Y + + + H+RTHT EKPY C QC + +A L H+
Sbjct: 132 FRCEDCGYRTAYMSNLTGHVRTHTDEKPYKCDQCDYSAARKGNLDRHM 179
Score = 43.1 bits (100), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + + +H+RTHTGEKPY C QC + + + L HL
Sbjct: 468 YMCEECGYRTAHRSNLTAHMRTHTGEKPYKCDQCDYSATKKSYLTKHL 515
Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CD+ + + H+ THTG KPY CG+C R+A L H++
Sbjct: 375 MRTHTGAKPYKCDLCDFSAATKSGLNKHMATHTGNKPYMCGECGLRTADRYSLTVHMR 432
Score = 43.1 bits (100), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTG KPY C C F +A+ +GL+ H+
Sbjct: 356 YMCGECGYRAAEKYSLTVHMRTHTGAKPYKCDLCDFSAATKSGLNKHM 403
Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + S + + H+R HTGE+PY C C + +A L H+ K
Sbjct: 188 YMCGECGHTSADRSALTVHMRRHTGEEPYKCDMCGYSAAKKCHLESHMAK 237
Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H+R+HTGEKPY C QC + +A + L H+ +
Sbjct: 412 YMCGECGLRTADRYSLTVHMRSHTGEKPYICDQCNYSAAKKSDLDSHMAR 461
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+F+C C Y + + H+RTHT KPY C QC + +A L H+
Sbjct: 299 RFMCGVCGYRATARSYITIHMRTHTDVKPYQCDQCDYSTARKGNLDRHM 347
Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 10/98 (10%)
Query: 99 SYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSY 158
S+M + F+ C+ C + +++ L H RT P++ C CDY +
Sbjct: 233 SHMAKHTGEKRFT--CVEC-GYRTAHMSNLSAHMRT---HTGDKPYK----CDQCDYSTA 282
Query: 159 NIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G + H HTG K + CG C +R+ + + + H++
Sbjct: 283 QKGNLDRHKANHTGGKRFMCGVCGYRATARSYITIHMR 320
Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C Y + + SH+ HTGEK + C +C +R+A ++ L H++
Sbjct: 216 YKCDMCGYSAAKKCHLESHMAKHTGEKRFTCVECGYRTAHMSNLSAHMR 264
>gi|260811303|ref|XP_002600362.1| hypothetical protein BRAFLDRAFT_204275 [Branchiostoma floridae]
gi|229285648|gb|EEN56374.1| hypothetical protein BRAFLDRAFT_204275 [Branchiostoma floridae]
Length = 579
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIR-THTGEKPYACGQCAFRSASVAGLHYHL 195
IRT F C CDY + ++ HIR HTGE+PY CG C F +A GL+ H+
Sbjct: 146 IRTHTGEKPFKCQQCDYSASQKPQLQRHIRGKHTGERPYHCGHCDFSAARKDGLYQHM 203
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 148 FVCYACDYFSY---NIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C+ CDY +Y + M HIRTHTGEKP+ C QC + ++ L H++
Sbjct: 124 FKCHVCDYSAYETISTTAMTKHIRTHTGEKPFKCQQCDYSASQKPQLQRHIR 175
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 148 FVCYACDYFSYN---IGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CDY S + + M HIRTHTGEKP+ C QC + ++ A L H++
Sbjct: 240 FKCEVCDYASASKSSLKTMTKHIRTHTGEKPFKCQQCDYSASQKAQLQRHIR 291
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD+ + G ++ H+ THTGEKPY C C + SA + L H+ K
Sbjct: 442 CELCDFSTARRGHLKRHMITHTGEKPYQCDVCGYASAEICSLKEHMTK 489
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+ C CDYF+ + H+ HTGEKPY C C F++ + L H
Sbjct: 496 YQCEECDYFTTKKRSLAMHMAKHTGEKPYMCEICGFKTGTQGTLRQH 542
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C Y S I ++ H+ HTGEKPY C +C + + L H+ K
Sbjct: 468 YQCDVCGYASAEICSLKEHMTKHTGEKPYQCEECDYFTTKKRSLAMHMAK 517
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CD+ + + H+ THTGEKPY+C C+F + L H+ K
Sbjct: 300 YHCGHCDFSAARKDGLYQHMTTHTGEKPYSCELCSFSARQKGHLKLHMAK 349
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CD+ + + H+ THTGEKPY+C C++ + L H+ K
Sbjct: 184 YHCGHCDFSAARKDGLYQHMTTHTGEKPYSCELCSYSARQKGKLKLHMAK 233
>gi|260832632|ref|XP_002611261.1| hypothetical protein BRAFLDRAFT_71216 [Branchiostoma floridae]
gi|229296632|gb|EEN67271.1| hypothetical protein BRAFLDRAFT_71216 [Branchiostoma floridae]
Length = 429
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C CD+ + G + H+ THTG+KPY CG+C +R+A + L H+
Sbjct: 264 YKCDQCDFSAAQKGNLDRHMATHTGDKPYMCGECGYRTARKSTLSQHI 311
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C CDY + + + H+ HTGEKPY C QC F +A L H+
Sbjct: 236 YMCGECDYSTADRSHLSRHMSRHTGEKPYKCDQCDFSAAQKGNLDRHM 283
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + HI TH+G+KP+ CG+C +R+ + + L H++
Sbjct: 292 YMCGECGYRTARKSTLSQHITTHSGDKPFMCGECGYRTTTKSNLSRHMR 340
Score = 43.5 bits (101), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 148 FVCYACDY-FSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C+Y +Y R HTGEKPY CG+C +R+AS + L H++
Sbjct: 348 YKCDRCEYSAAYKDNVDRHKAIKHTGEKPYMCGECGYRTASRSSLTVHMR 397
Score = 39.3 bits (90), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + + H+RTHTG KPY C QC + + + L HL
Sbjct: 377 YMCGECGYRTASRSSLTVHMRTHTGVKPYKCDQCDYAATKKSYLTKHL 424
>gi|260823122|ref|XP_002604032.1| hypothetical protein BRAFLDRAFT_71678 [Branchiostoma floridae]
gi|229289357|gb|EEN60043.1| hypothetical protein BRAFLDRAFT_71678 [Branchiostoma floridae]
Length = 235
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + SA L HL K
Sbjct: 154 YMCGECGYRTAQKSNLTKHMRTHTGEKPYKCNQCDYSSAQKGQLDQHLMK 203
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + H+ HTGEKPY CG+C +R+A + L H++
Sbjct: 117 MRTHTGERPYKCGQCDYSAADKSTLVLHLVKHTGEKPYMCGECGYRTAQKSNLTKHMR 174
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C Y + + H+RTHTGE+PY CGQC + +A + L HL K
Sbjct: 98 FKCRECGYSTAYQSQLFRHMRTHTGERPYKCGQCDYSAADKSTLVLHLVK 147
>gi|260781338|ref|XP_002585774.1| hypothetical protein BRAFLDRAFT_257354 [Branchiostoma floridae]
gi|229270815|gb|EEN41785.1| hypothetical protein BRAFLDRAFT_257354 [Branchiostoma floridae]
Length = 369
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Query: 108 NTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSH 166
NT PF C C + + L H +RT + C CDY + + H
Sbjct: 5 NTEKPFMCGEC-GFRTAKKSHLSRH-------MRTHTGEKPYKCDQCDYSAARKSHLDRH 56
Query: 167 IRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ HTGEKPY CG+C +R+A + L H+K
Sbjct: 57 LTKHTGEKPYMCGECGYRTARKSHLSRHMK 86
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 139 IRTDPFRHKFVCYACDYFSYNI---GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + C CDY Y + H+RTHTGEKPY C QC + +A A L HL
Sbjct: 195 MRTHTGDKPYKCDQCDYCGYRTNLKSTLSKHMRTHTGEKPYKCDQCDYSAAQKANLDLHL 254
Query: 196 KK 197
K
Sbjct: 255 TK 256
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC TNL + +RT + C CDY + + H+ HTGE
Sbjct: 209 CDYC--GYRTNLKSTLS------KHMRTHTGEKPYKCDQCDYSAAQKANLDLHLTKHTGE 260
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
KPY CG+C +R+A + L H+K
Sbjct: 261 KPYMCGECGYRAACKSNLSRHMK 283
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY CG+C +R+AS + L H++
Sbjct: 139 MRTHTGEKPYKCDQCDYSAARKSLLDIHLLKHTGEKPYMCGECGYRTASKSDLFIHMR 196
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C + + + H+RTHTGEKPY C QC + +A + L HL K
Sbjct: 10 FMCGECGFRTAKKSHLSRHMRTHTGEKPYKCDQCDYSAARKSHLDRHLTK 59
Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGEKPY C QC + +A + L HL
Sbjct: 120 YMCGECGYRAAQKSHLSKHMRTHTGEKPYKCDQCDYSAARKSLLDIHL 167
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 67/166 (40%), Gaps = 24/166 (14%)
Query: 25 RTNITSDVYIAVLVFSNLTFFITAQLVLMSLDQILNLNLSVLLVTTIPTQNH--SLCKHC 82
RT SD++I + + + Q L LS + T + + C +
Sbjct: 184 RTASKSDLFIHMRTHTGDKPYKCDQCDYCGYRTNLKSTLSKHMRTHTGEKPYKCDQCDYS 243
Query: 83 HSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYC--KAVLSTNLNELIEHCRTCKSMIR 140
+Q ++LDL ++ + + C C +A +NL+ R K+
Sbjct: 244 AAQKANLDL--------HLTKHTGEKPY--MCGECGYRAACKSNLS------RHMKTHTG 287
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
PF+ C C+Y + + H+ HTGEKPY CG+C R+A
Sbjct: 288 EKPFK----CDQCNYSAAQKSSLDKHLLKHTGEKPYMCGECGLRTA 329
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H++THTGEKP+ C QC + +A + L HL
Sbjct: 263 YMCGECGYRAACKSNLSRHMKTHTGEKPFKCDQCNYSAAQKSSLDKHL 310
Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + +H+RTHTGEKPY C QC + +A + L H+ K
Sbjct: 319 YMCGECGLRTAQKFTLLNHMRTHTGEKPYKCDQCDYSAARKSTLEDHITK 368
Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
++C C Y + + + H+RTHTG+KPY C QC +
Sbjct: 176 YMCGECGYRTASKSDLFIHMRTHTGDKPYKCDQCDY 211
>gi|260797713|ref|XP_002593846.1| hypothetical protein BRAFLDRAFT_75694 [Branchiostoma floridae]
gi|229279076|gb|EEN49857.1| hypothetical protein BRAFLDRAFT_75694 [Branchiostoma floridae]
Length = 316
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+VC C Y + + HIRTHTGEKPY C QC + +A+ + +YH+ K
Sbjct: 181 YVCDECGYRTARKYHLSQHIRTHTGEKPYKCDQCDYSAATKSAWNYHVAK 230
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IRT + C CDY + H+ H G+KPY CG+C +R+AS + L H+K
Sbjct: 200 IRTHTGEKPYKCDQCDYSAATKSAWNYHVAKHAGDKPYMCGECGYRTASKSILSRHMK 257
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + + H++THTG+KPY CG+C +RSA + L H+
Sbjct: 97 YMCGECGYRTVSKSNLSRHMKTHTGDKPYMCGECGYRSADKSTLSKHM 144
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y S + + H+ THTG+KPY CG+C +R+ + L H+
Sbjct: 125 YMCGECGYRSADKSTLSKHMTTHTGDKPYMCGECGYRANRKSYLSQHM 172
Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 50/117 (42%), Gaps = 21/117 (17%)
Query: 101 MIRPNANNTFSPF----CIY---CKAVLS----TNLNELIEHCRTCK----SMIRTDPFR 145
M RP + P+ C Y CK+ LS T+ E C C I D
Sbjct: 1 MERPRTHTGEKPYICDDCGYRAACKSALSRHMRTHTGEKPFKCDQCDYSAAQKIHLDQHL 60
Query: 146 HK------FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
K ++C C Y + + H+ THT +KPY CG+C +R+ S + L H+K
Sbjct: 61 TKHTGKKLYMCGECGYRANRKSNLSQHMTTHTEDKPYMCGECGYRTVSKSNLSRHMK 117
Score = 43.5 bits (101), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
RT ++C C Y + + H+RTHTGEKP+ C QC + +A L HL K
Sbjct: 5 RTHTGEKPYICDDCGYRAACKSALSRHMRTHTGEKPFKCDQCDYSAAQKIHLDQHLTK 62
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+ THTG KPY C +C +R+A L H++
Sbjct: 153 YMCGECGYRANRKSYLSQHMTTHTGVKPYVCDECGYRTARKYHLSQHIR 201
>gi|395850990|ref|XP_003798053.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 333 [Otolemur
garnettii]
Length = 849
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 40/88 (45%), Gaps = 13/88 (14%)
Query: 112 PF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
PF C C + N N LI H R + C C +RSH+RTH
Sbjct: 605 PFECSQCGKTFTRNFN-LILHQRNHTG-------ERPYECKDCGKAFNQPSSLRSHVRTH 656
Query: 171 TGEKPYACGQC--AFRSASVAGLHYHLK 196
TGEKP+ CGQC AFR S L HL+
Sbjct: 657 TGEKPFECGQCGKAFREHS--SLKTHLR 682
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 127 ELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
+++ T KS +RT +VC C +R H+RTH+G+KPY C +C
Sbjct: 725 QVLSRLSTLKSHMRTHTGEKPYVCQECGRAFGEPSSLRKHVRTHSGQKPYTCQECGRAFG 784
Query: 187 SVAGLHYHLK 196
+ L H++
Sbjct: 785 QSSHLLVHVR 794
Score = 44.7 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 10/89 (11%)
Query: 118 KAVLSTNLNELIEHCRTCKSMIRTDPFR--HK--------FVCYACDYFSYNIGCMRSHI 167
K L T+ E C C RT HK + C C + ++SH+
Sbjct: 678 KTHLRTHTREKPYECNHCGKPFRTSTHLNVHKRIHTGEKLYECGTCGQVLSRLSTLKSHM 737
Query: 168 RTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RTHTGEKPY C +C + L H++
Sbjct: 738 RTHTGEKPYVCQECGRAFGEPSSLRKHVR 766
Score = 38.1 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 51/138 (36%), Gaps = 33/138 (23%)
Query: 79 CKHC------------HSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLN 126
C HC H ++ + L C TC ++ + K+ + T+
Sbjct: 692 CNHCGKPFRTSTHLNVHKRIHTGEKLYECGTCGQVLSRLST---------LKSHMRTHTG 742
Query: 127 ELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY 176
E C+ C + +RT + + C C + H+RTHT +PY
Sbjct: 743 EKPYVCQECGRAFGEPSSLRKHVRTHSGQKPYTCQECGRAFGQSSHLLVHVRTHTVGRPY 802
Query: 177 ACGQC--AFRSASVAGLH 192
C QC AFR +S +H
Sbjct: 803 QCNQCEKAFRHSSSLTVH 820
>gi|260788067|ref|XP_002589072.1| hypothetical protein BRAFLDRAFT_213797 [Branchiostoma floridae]
gi|229274246|gb|EEN45083.1| hypothetical protein BRAFLDRAFT_213797 [Branchiostoma floridae]
Length = 313
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 50/118 (42%), Gaps = 15/118 (12%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKS 137
+C C Q S L L +M ++ C C LN L +H RT
Sbjct: 89 MCGECSKQFSQLGNLK-----RHMRTHTGEKSYQ--CEECGRQFG-ELNNLKKHMRT--- 137
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ PFR C C +G ++SH+RTHTGEKPY C +C+ + L H+
Sbjct: 138 LTGEKPFR----CEECRKLFNELGNLKSHMRTHTGEKPYMCKECSRPFSDPGALKMHM 191
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C + ++ H+RTHTGEKPY CG+C+ + + + L H+
Sbjct: 48 KTHMRTHTGEKPYNCEDCSMQFSQLSALKGHMRTHTGEKPYMCGECSKQFSQLGNLKRHM 107
Query: 196 K 196
+
Sbjct: 108 R 108
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C G ++ HIRTHTGEKPY C +C+++ + L H++
Sbjct: 228 YTCEECSRQFSEKGNLKRHIRTHTGEKPYKCEECSWQFSEKGNLERHIQ 276
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 11/97 (11%)
Query: 110 FSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYN 159
FS C+ K + T+ E +C C K +RT ++C C
Sbjct: 41 FSQMCVL-KTHMRTHTGEKPYNCEDCSMQFSQLSALKGHMRTHTGEKPYMCGECSKQFSQ 99
Query: 160 IGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+G ++ H+RTHTGEK Y C +C + + L H++
Sbjct: 100 LGNLKRHMRTHTGEKSYQCEECGRQFGELNNLKKHMR 136
Score = 42.7 bits (99), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IRT + C C + G + HI+THTGEKPY C +C+ + + L H+
Sbjct: 244 KRHIRTHTGEKPYKCEECSWQFSEKGNLERHIQTHTGEKPYRCEECSRQFSRSEILKNHM 303
Query: 196 K 196
+
Sbjct: 304 R 304
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C + ++ H+RTHTGEKPY+C +C+ + + + L H++
Sbjct: 4 YRCEECSRQFSKLSHLKGHVRTHTGEKPYSCEECSMQFSQMCVLKTHMR 52
>gi|260822855|ref|XP_002602233.1| hypothetical protein BRAFLDRAFT_216733 [Branchiostoma floridae]
gi|229287540|gb|EEN58245.1| hypothetical protein BRAFLDRAFT_216733 [Branchiostoma floridae]
Length = 534
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RT + C C Y + +++H+ THTG KPY CG C FR+A GL +H++
Sbjct: 149 FRTHTGEKPYKCDQCGYSAATKSALKNHLVTHTGAKPYICGDCGFRAAQRCGLSFHMR 206
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C Y + + H RTHTGEKPY C QC + +A+ + L HL
Sbjct: 130 FMCGECGYRTARKSSLSGHFRTHTGEKPYKCDQCGYSAATKSALKNHL 177
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 12/84 (14%)
Query: 113 FCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIR-THT 171
FC Y + S L +H +RT + C CDY + G + HI HT
Sbjct: 20 FCGYVTGIKS----RLSQH-------MRTHTGERPYKCDQCDYSAAQKGHLNIHIALRHT 68
Query: 172 GEKPYACGQCAFRSASVAGLHYHL 195
GEKPY CG+C +R+A + L H+
Sbjct: 69 GEKPYMCGECGYRTAHKSNLSKHM 92
Score = 43.1 bits (100), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY CG+C R+A L H++
Sbjct: 459 MRTHTREKPYKCDQCDYSAAVKSTLDRHLARHTGEKPYMCGECGHRTAQKYTLSRHMR 516
Score = 42.7 bits (99), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHI-RTHTGEKPYACGQCAFRSASVAGLHYHLK 196
T P+R C C+Y + + HI HTGEKPY CG+C +R+A + L H++
Sbjct: 237 TKPYR----CDQCNYSAARKPTLEEHIAGKHTGEKPYMCGECGYRTAYRSALSQHMR 289
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGEKPY C QC + +A L+ H+
Sbjct: 269 YMCGECGYRTAYRSALSQHMRTHTGEKPYKCDQCDYSAAYKYSLNRHV 316
Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 11/84 (13%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C Y A S N L+ H P+ +C C + + + H+RTHTGE
Sbjct: 163 CGYSAATKSALKNHLVTH-------TGAKPY----ICGDCGFRAAQRCGLSFHMRTHTGE 211
Query: 174 KPYACGQCAFRSASVAGLHYHLKK 197
KPY C QC + +A + L H K
Sbjct: 212 KPYKCDQCDYSAAWKSNLDRHKAK 235
Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+RTHTGEKPY C C + +A A + H++
Sbjct: 383 YMCDDCGYRAVQRCTLSRHMRTHTGEKPYKCDHCDYTAAGKATVDNHIE 431
Score = 39.7 bits (91), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C +C + + + H+RTHTGEKPY C QC + +A L H+
Sbjct: 326 YMCDSCGFGTARKFSLFQHMRTHTGEKPYKCDQCYYSAARKPNLDLHV 373
Score = 39.7 bits (91), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+C C Y + + H+RTHTGE+PY C QC + +A L+ H+
Sbjct: 17 ICGFCGYVTGIKSRLSQHMRTHTGERPYKCDQCDYSAAQKGHLNIHI 63
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 148 FVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + +HI HTG+KP+ CG+C +R+A + L H +
Sbjct: 101 YKCDRCDYSAAQKLTLDNHIAARHTGDKPFMCGECGYRTARKSSLSGHFR 150
Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIR-THTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + +HI HTG KPY G+C FR+ + L H++
Sbjct: 402 MRTHTGEKPYKCDHCDYTAAGKATVDNHIEVKHTGVKPYMVGECGFRTNQKSKLSRHMR 460
>gi|327266618|ref|XP_003218101.1| PREDICTED: hypothetical protein LOC100567772 [Anolis carolinensis]
Length = 2239
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 50/128 (39%), Gaps = 25/128 (19%)
Query: 79 CKHCH-SQLSHLDLLDH-CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC- 135
C HC S+ H+ H C C NTF C TN + C C
Sbjct: 344 CSHCGGSERIHMGQRPHKCSHCG--------NTFG-----CNPQEETNGGKKFHTCAECG 390
Query: 136 -KSMIRTDPFRHKFV--------CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
K M R+ +H+ V C C N R+H RTHTGEK Y C QC +
Sbjct: 391 EKYMHRSGLLKHQGVHWGEKPYKCLTCGENFGNYSNFRTHCRTHTGEKQYKCLQCEMCFS 450
Query: 187 SVAGLHYH 194
S+A L H
Sbjct: 451 SIACLRAH 458
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 50/128 (39%), Gaps = 25/128 (19%)
Query: 79 CKHCH-SQLSHLDLLDH-CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC- 135
C HC S+ H+ H C C NTF C TN + C C
Sbjct: 1273 CSHCGGSERIHMGRRPHKCSHCG--------NTFG-----CNPQEETNGGKKFHTCAECG 1319
Query: 136 -KSMIRTDPFRHKFV--------CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
K M R+ +H+ V C C N R+H RTHTGEK Y C QC +
Sbjct: 1320 EKYMHRSGLLKHQGVHRGEKPYKCLKCGENFGNYSNFRTHCRTHTGEKQYKCLQCEMCFS 1379
Query: 187 SVAGLHYH 194
S+A L H
Sbjct: 1380 SIARLRAH 1387
>gi|260822705|ref|XP_002606742.1| hypothetical protein BRAFLDRAFT_82381 [Branchiostoma floridae]
gi|229292086|gb|EEN62752.1| hypothetical protein BRAFLDRAFT_82381 [Branchiostoma floridae]
Length = 373
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 95 CKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC 153
C+ CS R P+ C C S L +L H +RT ++C C
Sbjct: 220 CEKCSRQFREK------PYMCEECSRQFS-GLGDLKGH-------MRTHTGEKPYMCEEC 265
Query: 154 DYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+G ++ H+RTHTGEKPY C +C+++ + + L H++
Sbjct: 266 SRQFSGLGDLKRHMRTHTGEKPYRCEECSWQFSRLGDLKRHMR 308
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 58/122 (47%), Gaps = 21/122 (17%)
Query: 78 LCKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTC 135
+C+ C Q S L DL H +T + P+ C C S L +L H RT
Sbjct: 261 MCEECSRQFSGLGDLKRHMRT---------HTGEKPYRCEECSWQFS-RLGDLKRHMRT- 309
Query: 136 KSMIRTDPFRHKFVCYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
P+R C C FS+ G ++ H+RTHTGEKPY C +C+ + + ++ L H
Sbjct: 310 --HTGEKPYR----CEECSRQFSW-FGNLKGHMRTHTGEKPYTCEECSRQFSQLSNLKVH 362
Query: 195 LK 196
+K
Sbjct: 363 MK 364
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
KS +RT + C C +G + H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 66 KSHMRTHTGEKPYRCEECSRQFSLLGNLEKHMRTHTGEKPYRCEECSRQFSQLESLEKHM 125
Query: 196 K 196
+
Sbjct: 126 R 126
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 56/139 (40%), Gaps = 29/139 (20%)
Query: 79 CKHCHSQLSHL-DLLDH-----------CKTCSYMIRPNAN--------NTFSPF-CIYC 117
C+ C Q S L DL H C+ CS N P+ C C
Sbjct: 52 CEECSKQFSQLSDLKSHMRTHTGEKPYRCEECSRQFSLLGNLEKHMRTHTGEKPYRCEEC 111
Query: 118 KAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA 177
S L L +H RT P+R C C +G ++ H+ THTGEKPY
Sbjct: 112 SRQFS-QLESLEKHMRT---HTGEKPYR----CDECSKQFSQLGNLKRHMETHTGEKPYR 163
Query: 178 CGQCAFRSASVAGLHYHLK 196
C +C+ + + ++ L H+K
Sbjct: 164 CDECSKQFSQLSDLKRHMK 182
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C + ++SH+RTHTGEKPY C +C+ + + + L H++
Sbjct: 50 FRCEECSKQFSQLSDLKSHMRTHTGEKPYRCEECSRQFSLLGNLEKHMR 98
>gi|326916622|ref|XP_003204605.1| PREDICTED: zinc finger protein 513-like [Meleagris gallopavo]
Length = 452
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%)
Query: 104 PNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCM 163
P P + C+ L ++C C R + C C + S+ +
Sbjct: 37 PEEGGEPGPAALPCRQCGLQLAASLGQNCLQCAGTEGGRNQRIVYTCQLCPFASHYSSHL 96
Query: 164 RSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ H++TH GEKP+AC QCA+ SA + L HL+
Sbjct: 97 KRHMKTHNGEKPFACPQCAYASAQLVNLTRHLR 129
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 10/93 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCM 163
C+ C ++ C+ C K ++T F C C Y S + +
Sbjct: 65 CLQCAGTEGGRNQRIVYTCQLCPFASHYSSHLKRHMKTHNGEKPFACPQCAYASAQLVNL 124
Query: 164 RSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
H+RTHTGEKPY C C+F +S+ L H +
Sbjct: 125 TRHLRTHTGEKPYRCTGCSFACSSLGNLKRHER 157
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++T F C C Y S ++ ++ H R HTGEKPY C C + ++A L H +
Sbjct: 310 MKTHSGEKPFACPLCPYASAHLDNLKRHQRVHTGEKPYKCQLCDYACGNLANLKRHGR 367
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 9/89 (10%)
Query: 108 NTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSH 166
N PF C C A S L L H RT P+R C C + ++G ++ H
Sbjct: 104 NGEKPFACPQC-AYASAQLVNLTRHLRT---HTGEKPYR----CTGCSFACSSLGNLKRH 155
Query: 167 IRTHTGEKPYACGQCAFRSASVAGLHYHL 195
R H+ +KP+ C C +R L H+
Sbjct: 156 ERVHSQDKPFQCAACDYRCNQSRNLKRHM 184
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C + ++ + H++TH+GEKP+AC C + SA + L H +
Sbjct: 291 FACSLCPFVTHYPNHLARHMKTHSGEKPFACPLCPYASAHLDNLKRHQR 339
Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 11/84 (13%)
Query: 112 PFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHT 171
P C Y S +L+ L H R P++ C CDY N+ ++ H R H+
Sbjct: 322 PLCPY----ASAHLDNLKRHQRV---HTGEKPYK----CQLCDYACGNLANLKRHGRIHS 370
Query: 172 GEKPYACGQCAFRSASVAGLHYHL 195
G+KP+ C C++ L H+
Sbjct: 371 GDKPFQCSLCSYSCNQSMNLKRHM 394
>gi|260814472|ref|XP_002601939.1| hypothetical protein BRAFLDRAFT_86423 [Branchiostoma floridae]
gi|229287242|gb|EEN57951.1| hypothetical protein BRAFLDRAFT_86423 [Branchiostoma floridae]
Length = 491
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + C+ H+ HTGEKPY CG+C +R+A L+ H+ K
Sbjct: 237 YKCDQCDYSTVWKECLTGHMARHTGEKPYMCGECGYRTAQKQCLNIHMSK 286
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CD+ + GC+ HI HTGEKPY CG+C FR+ + + L H+K
Sbjct: 413 YRCDQCDFCTAWKGCLTRHIEEHTGEKPYLCGECGFRT-TKSNLSRHMK 460
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + C+ H+ HTGEKPY CG+C +R+A L+ H+ K
Sbjct: 265 YMCGECGYRTAQKQCLNIHMSKHTGEKPYMCGECGYRTAQKQCLNIHMSK 314
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + C+ H+ HTGEKP+ CG+C +R+A A L H++K
Sbjct: 293 YMCGECGYRTAQKQCLNIHMSKHTGEKPFMCGECGYRTAIKAYLSKHIQK 342
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C Y + + + +H+R HTGEKPY C QC F +A L H+++
Sbjct: 385 YTCKECGYTTVSQAYLTNHMRVHTGEKPYRCDQCDFCTAWKGCLTRHIEE 434
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY+S G + H HTG KPY C +C + + S A L H++
Sbjct: 357 YKCDQCDYYSSKKGDLDIHRTKHTGVKPYTCKECGYTTVSQAYLTNHMR 405
Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F C C+Y ++N + +H+ HTGE+PY C +C + ++ L H+
Sbjct: 151 FACSLCEYRTHNSNHLSNHMAVHTGERPYKCDKCDYSTSRKEHLKRHV 198
Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++ C CD+ + + H+ HTGEKP+ C +C R A L +H K
Sbjct: 94 RYKCEQCDFSTAWKVSLARHMYVHTGEKPFVCEECGLRYADKYRLGHHKK 143
>gi|260788473|ref|XP_002589274.1| hypothetical protein BRAFLDRAFT_270548 [Branchiostoma floridae]
gi|229274450|gb|EEN45285.1| hypothetical protein BRAFLDRAFT_270548 [Branchiostoma floridae]
Length = 236
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
C+ C Y SY+ G ++ HI THTGE+P+ CG C F S ++ L H+
Sbjct: 131 CHICAYSSYDSGNLKRHIATHTGERPFKCGICPFSSIRMSDLQRHM 176
Score = 39.7 bits (91), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 12/90 (13%)
Query: 118 KAVLSTNLNELIEHCRTCK-SMIRTDPFR----------HKFVCYACDYFSYNIGCMRSH 166
K L T+ E HC+ C S ++D + F C C++ + + + H
Sbjct: 2 KRHLRTHTGERPYHCQLCDYSATQSDNLKKHVMSKHTDVRPFRCGHCEFSTVDKSKLVKH 61
Query: 167 IRT-HTGEKPYACGQCAFRSASVAGLHYHL 195
IR H GEKPY C C F +A L YHL
Sbjct: 62 IRICHGGEKPYHCDMCEFSTAEKRRLKYHL 91
>gi|332858736|ref|XP_514743.3| PREDICTED: transcriptional repressor CTCFL isoform 3 [Pan
troglodytes]
gi|332858738|ref|XP_003339394.1| PREDICTED: transcriptional repressor CTCFL [Pan troglodytes]
gi|332858740|ref|XP_003317049.1| PREDICTED: transcriptional repressor CTCFL isoform 1 [Pan
troglodytes]
Length = 663
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H +T K+ +F C C Y M +HIRTHTGE
Sbjct: 460 CRYCPAVFHERY-ALIQHQKTHKN-------EKRFKCKHCSYACKQERHMTAHIRTHTGE 511
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KP+ C C FR + H+ + YH
Sbjct: 512 KPFTCLSCNKCFRQKQLLNAHF---RKYH 537
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 324 TSGELVRHTRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 383
Query: 190 GLHYHLK 196
L H++
Sbjct: 384 KLKRHMR 390
Score = 43.9 bits (102), Expect = 0.034, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +R+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 358 KRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEKPYECHICHTRFTQSGTMKIHI 417
Score = 40.0 bits (92), Expect = 0.60, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 130 EHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSAS 187
E R+ K+ +T + F C C + S + H++THT EKP+ C C FR+ +
Sbjct: 239 EKARSTKNQRKTKGAKQTFHCDVCMFTSSRMSSFNRHMKTHTNEKPHLCHLCLKTFRTVT 298
Query: 188 VAGLH 192
+ H
Sbjct: 299 LLRNH 303
Score = 35.8 bits (81), Expect = 9.6, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKTY 199
+C+ C + +R+H+ THTG +PY C C AF ++ H K T+
Sbjct: 286 LCHLCLKTFRTVTLLRNHVNTHTGTRPYKCNDCNMAFVTSGELVRHTRYKHTH 338
>gi|260832854|ref|XP_002611372.1| hypothetical protein BRAFLDRAFT_134906 [Branchiostoma floridae]
gi|229296743|gb|EEN67382.1| hypothetical protein BRAFLDRAFT_134906 [Branchiostoma floridae]
Length = 695
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + I + H+RTHTGEKPY C QC + +A A L YH
Sbjct: 351 YICDECGYRTACISTLARHMRTHTGEKPYNCDQCDYSAARKAQLDYH 397
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL-HYHLKK 197
++C C Y + + SH+R HTGEKPY C QC + +A A L H+HL K
Sbjct: 294 YICDECGYKTAQKSNLSSHVRIHTGEKPYKCDQCDYSAAWKASLDHHHLAK 344
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL-HYHLKK 197
++C C Y + + SH+R HTGEKPY C QC + +A A L H+HL K
Sbjct: 492 YICDECGYKTAQKSNLSSHVRIHTGEKPYKCDQCDYSAAWKASLDHHHLAK 542
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
FVC C+Y + + H++THTGEKPY C QC + +A + L H+ K
Sbjct: 606 FVCDKCEYKTAQRSNLTQHMKTHTGEKPYKCNQCDYSAAQKSSLDQHVAK 655
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + + SH+R HTG+KPY C QC + +A L YH
Sbjct: 67 YICDECGYKTAEKSNLSSHVRLHTGKKPYKCDQCDYSAAQKVSLKYH 113
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+VC C Y + + H+R HTGEKPY C QC + +A L HL K
Sbjct: 181 YVCDECGYKTVVKSNLSQHVRIHTGEKPYKCDQCDYSAAQKCSLDQHLAK 230
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + I + H+RTHTG+KPY C QC + +A + L H
Sbjct: 549 YICDECGYRAALISTLARHMRTHTGDKPYKCDQCDYSAAQKSSLDVH 595
Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+VC C Y + + H+R HTGEKPY C QC + +A L H
Sbjct: 124 YVCDECGYKTVVKSNLSRHVRIHTGEKPYKCDQCDYSAARKCSLDLH 170
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+R + + C CDY + + H HTGEKP+ C QC + +A + L HL K
Sbjct: 2 VRIHTGKKPYKCDQCDYSAARKYHLDRHRAKHTGEKPFKCDQCDYSAAQKSSLDKHLAK 60
Score = 40.4 bits (93), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
+VC C Y + + H+R HTGEKPY C QC + +A
Sbjct: 237 YVCDECGYKTVVKSNLSRHVRIHTGEKPYKCDQCDYSAA 275
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CDY + + H+ HTGE Y C +C +++A + L H++
Sbjct: 39 FKCDQCDYSAAQKSSLDKHLAKHTGENLYICDECGYKTAEKSNLSSHVR 87
Score = 36.6 bits (83), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 25/50 (50%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H HTG+K Y C QC + +A + L HL K
Sbjct: 436 YICEECGYRAARKSTLDRHHAKHTGKKTYKCDQCDYSAAQKSHLDQHLAK 485
Score = 36.2 bits (82), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH-----LKKTY 199
+VC C Y + + H++ HTG+K Y C +C +R+A + L H KKTY
Sbjct: 408 YVCDECGYKTALKSYLSQHVQIHTGKKSYICEECGYRAARKSTLDRHHAKHTGKKTY 464
Score = 36.2 bits (82), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGE Y C +C +++A + L H++
Sbjct: 464 YKCDQCDYSAAQKSHLDQHLAKHTGENLYICDECGYKTAQKSNLSSHVR 512
Score = 35.8 bits (81), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 137 SMIRTDPFRHKFVCYACDY-FSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
S +R + C CDY ++ H+ HT EK Y C +C +R+A ++ L H+
Sbjct: 311 SHVRIHTGEKPYKCDQCDYSAAWKASLDHHHLAKHTSEKSYICDECGYRTACISTLARHM 370
Query: 196 K 196
+
Sbjct: 371 R 371
>gi|260821625|ref|XP_002606133.1| hypothetical protein BRAFLDRAFT_88044 [Branchiostoma floridae]
gi|229291471|gb|EEN62143.1| hypothetical protein BRAFLDRAFT_88044 [Branchiostoma floridae]
Length = 477
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H H+GEKPY CG+C +R+A+ +GL H++
Sbjct: 38 MRTHTGEKPYKCDQCDYSAAEKSTLNYHQTRHSGEKPYMCGECGYRTAAKSGLSKHMR 95
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H H+GEKPY CG+C +R+A+ +GL H++
Sbjct: 143 MRTHTGEKPYKCDQCDYSAAEKSTLNYHQTRHSGEKPYMCGECGYRTAAKSGLSKHMR 200
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + + H+RTH+GEKPY C QC + + +GL +HL K
Sbjct: 397 FMCGECGYRTVHKSHLSRHMRTHSGEKPYKCHQCDYSAVQKSGLDHHLAK 446
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
FVC C Y + +H+RTHTGEKPY C QC + + S + L YH +
Sbjct: 260 FVCKKCAYKTAYRSNFSNHMRTHTGEKPYKCDQCDYSARSKSALGYHAR 308
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 151 YACDYFSYNIGCMRS----HIRTHTGEKPYACGQCAFRSASVAGLHYH 194
Y CD Y+ +RS H+RTHTGEKPY C QC + +A + L+YH
Sbjct: 123 YKCDQCDYSARTVRSYLLRHMRTHTGEKPYKCDQCDYSAAEKSTLNYH 170
Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+ C C Y + + H+RTHTGEKPY C QC + +A + L+YH
Sbjct: 19 YTCAVCGYRTAVRSYLLRHMRTHTGEKPYKCDQCDYSAAEKSTLNYH 65
Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASV 188
++C C Y + + H+RTHTGEKPY C Q A +S V
Sbjct: 180 YMCGECGYRTAAKSGLSKHMRTHTGEKPYKCDQAAVKSKLV 220
Score = 40.0 bits (92), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C+ CDY + + H+ H+GEKPY CG +R+A + L HL+
Sbjct: 416 MRTHSGEKPYKCHQCDYSAVQKSGLDHHLAKHSGEKPYLCG---YRAAHRSSLSMHLR 470
Score = 39.3 bits (90), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 19/31 (61%)
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
H RTHTGEKPY C QC + + L YH K
Sbjct: 358 HARTHTGEKPYKCDQCDYSAVHKCTLDYHFK 388
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
++C C Y + + H+RTHTGEKPY C Q F
Sbjct: 75 YMCGECGYRTAAKSGLSKHMRTHTGEKPYKCDQSNF 110
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 5/38 (13%)
Query: 151 YACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASV 188
Y CD +++ +H+RTHTGEKPY C QC + + +V
Sbjct: 103 YKCDQSNFS-----NHMRTHTGEKPYKCDQCDYSARTV 135
Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 139 IRTDPFRHK-FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ 180
RT R K ++C C Y + + +H+RTHTGEKPY C Q
Sbjct: 307 ARTKHTREKRYMCGECGYTTAQKCTLSNHMRTHTGEKPYKCDQ 349
Score = 35.8 bits (81), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + H RT HT EK Y CG+C + +A L H++
Sbjct: 279 MRTHTGEKPYKCDQCDYSARSKSALGYHARTKHTREKRYMCGECGYTTAQKCTLSNHMR 337
>gi|198467109|ref|XP_001354252.2| GA11559 [Drosophila pseudoobscura pseudoobscura]
gi|198149513|gb|EAL31305.2| GA11559 [Drosophila pseudoobscura pseudoobscura]
Length = 1135
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 8/88 (9%)
Query: 112 PFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHT 171
P C C+ V S+ + K +R+ +F C C+Y + + R H+ TH
Sbjct: 966 PQCSLCQRVFSSK--------SSLKLHLRSHQANKRFQCDTCEYEASDHNAFRRHLATHR 1017
Query: 172 GEKPYACGQCAFRSASVAGLHYHLKKTY 199
K YAC C FR+ HL+K +
Sbjct: 1018 DRKRYACPHCDFRAIQSTAFRIHLQKRH 1045
>gi|47214636|emb|CAG01477.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2287
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C+ C ++ HIR+HTGE+PY C C F + + L+ H K H
Sbjct: 206 KYICHYCGRACAKPSVLKKHIRSHTGERPYPCIPCGFSFKTKSNLYKHRKSHAH 259
Score = 44.7 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 1677 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYVCKFCNFAFKTKGNLTKHMKSKAH 1732
>gi|301603883|ref|XP_002931590.1| PREDICTED: myoneurin-like [Xenopus (Silurana) tropicalis]
Length = 614
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 12/138 (8%)
Query: 60 NLNLSVLLVTTIPTQNHSLC---KHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIY 116
N++L L VT P ++ C +HC S ++ + + ++C + + P C
Sbjct: 252 NISLETLAVTQKPAKSQQDCAMKEHCISNIADITNMCTMESCEKELDQKYSKN-KPVCNT 310
Query: 117 CKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY 176
C V S + L H R K + +VC+ C +++H+RTHTGEKPY
Sbjct: 311 CGKVFS-EASSLRRHMRIHKGV-------KPYVCHLCAKAFTQCNQLKTHVRTHTGEKPY 362
Query: 177 ACGQCAFRSASVAGLHYH 194
C +C A L +H
Sbjct: 363 QCKKCDKGFAQKCQLVFH 380
Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+VC C + H+R HTGEKPY C C A + L H +K
Sbjct: 419 YVCDRCGQRFAQASTLTYHVRRHTGEKPYVCDTCGKAFAVSSSLITHARK 468
>gi|260823064|ref|XP_002604003.1| hypothetical protein BRAFLDRAFT_71708 [Branchiostoma floridae]
gi|229289328|gb|EEN60014.1| hypothetical protein BRAFLDRAFT_71708 [Branchiostoma floridae]
Length = 529
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTH+GEKPY C QC F +A + L +HL+K
Sbjct: 380 YMCAECGYRTARKSNLYKHMRTHSGEKPYKCDQCDFSAAQKSNLDFHLRK 429
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A + H HL K
Sbjct: 156 YMCGECGYRTAYKSYLSQHMRTHTGEKPYKCDQCDYSAAQKSAFHRHLAK 205
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + + H+RTHTGEKPY C QC + +A VA L H+
Sbjct: 100 YMCGECGYRATKMFDLARHMRTHTGEKPYKCDQCDYSAAQVANLDQHI 147
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
FVC C Y + + H+RTHTGEKPY C C + +A A L YH+
Sbjct: 43 FVCGECGYRAAYRSHISQHMRTHTGEKPYKCHHCDYAAAQQANLAYHI 90
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C+ CDY + + HI T HTGEKPY CG+C +R+ + L H++
Sbjct: 62 MRTHTGEKPYKCHHCDYAAAQQANLAYHIATKHTGEKPYMCGECGYRATKMFDLARHMR 120
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+R+ + C CDY + + H+ HTGEKPY C +C +R+A + L+ H++
Sbjct: 343 MRSHSGEKPYKCDQCDYSAAQKSDLDIHLARHTGEKPYMCAECGYRTARKSNLYKHMR 400
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
TD RH VC C Y + N + H+RTHTGE+PY C C + +A L H+
Sbjct: 207 TDGGRH--VCDVCGYKTPNKSGLSRHMRTHTGERPYKCDHCHYSAARKDDLKKHV 259
Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + HIRTHTGE PY C QC + SA + L+ HL K
Sbjct: 464 YMCGVCGHRTARKSDLFRHIRTHTGENPYKCDQCEYSSAEKSTLNRHLTK 513
Score = 42.7 bits (99), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + + H+ THTG+KPY CG C R+A + L H++
Sbjct: 436 YKCDQCDYSAAHKRTLDRHLMTHTGDKPYMCGVCGHRTARKSDLFRHIR 484
Score = 42.7 bits (99), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + C CD+ + + H+R HTGEKPY C QC + +A L HL
Sbjct: 399 MRTHSGEKPYKCDQCDFSAAQKSNLDFHLRKHTGEKPYKCDQCDYSAAHKRTLDRHL 455
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 18/112 (16%)
Query: 95 CKTCSYMIRPNANNTF---------SPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPF 144
C C Y AN + P+ C C +T + +L H +RT
Sbjct: 73 CHHCDYAAAQQANLAYHIATKHTGEKPYMCGEC-GYRATKMFDLARH-------MRTHTG 124
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + + HI EKPY CG+C +R+A + L H++
Sbjct: 125 EKPYKCDQCDYSAAQVANLDQHIAAKHSEKPYMCGECGYRTAYKSYLSQHMR 176
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C + + + H+R+H+GEKPY C QC + +A + L HL +
Sbjct: 324 FMCDECGFRTPCKSTLTRHMRSHSGEKPYKCDQCDYSAAQKSDLDIHLAR 373
Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 31/59 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C C Y + ++ H+ HTG+KP+ C +C +R+ + L H++K
Sbjct: 231 MRTHTGERPYKCDHCHYSAARKDDLKKHVANHTGDKPFLCVECGYRACRRSILSVHMRK 289
>gi|410895571|ref|XP_003961273.1| PREDICTED: zinc finger protein Pegasus-like [Takifugu rubripes]
Length = 412
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC + + LIEH R I T H+ C C + S + +H+R+HTGE
Sbjct: 87 CSYCNYA-NKGMARLIEHIR-----IHTGEKPHR--CQLCPFASAYERHLEAHMRSHTGE 138
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C CAFR + + L +H ++ +
Sbjct: 139 KPYKCDLCAFRCSDRSNLSHHRRRRH 164
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
K+ C C+Y + + + HIR HTGEKP+ C C F SA L H++
Sbjct: 84 KYKCSYCNYANKGMARLIEHIRIHTGEKPHRCQLCPFASAYERHLEAHMR 133
>gi|260815225|ref|XP_002602374.1| hypothetical protein BRAFLDRAFT_61124 [Branchiostoma floridae]
gi|229287683|gb|EEN58386.1| hypothetical protein BRAFLDRAFT_61124 [Branchiostoma floridae]
Length = 192
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 12/109 (11%)
Query: 88 HLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHK 147
H DH KT +M FS C C S L +L H +RT
Sbjct: 89 HFRRPDHLKT--HMRTHTGEKLFS--CEECSRQFS-ELGDLKRH-------MRTHTGEKP 136
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C +G +R HIRTHTGEKPY C +C+ + + L H++
Sbjct: 137 YNCEECSKQFSQLGVLRRHIRTHTGEKPYKCEECSRQFNQLGALKRHMR 185
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
K +RT + C C N+ +++H+RTHTGEKPY C +C+
Sbjct: 41 KRHMRTHTGERPYRCEECSKQFGNLCNLKTHVRTHTGEKPYKCEECS 87
Score = 39.3 bits (90), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++ C C + ++ H+RTHTGE+PY C +C+ + ++ L H++
Sbjct: 24 RYKCEECSRQFSRLDGLKRHMRTHTGERPYRCEECSKQFGNLCNLKTHVR 73
>gi|260808221|ref|XP_002598906.1| hypothetical protein BRAFLDRAFT_107334 [Branchiostoma floridae]
gi|229284181|gb|EEN54918.1| hypothetical protein BRAFLDRAFT_107334 [Branchiostoma floridae]
Length = 461
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 50/123 (40%), Gaps = 21/123 (17%)
Query: 87 SHLD--LLDHCKTCSYMIRPNANNTFSP-----------FCIYCKAVLSTNLNELIEHCR 133
SHLD L H YM F P C C +T + L+ H
Sbjct: 102 SHLDKHLTKHTGEKPYMCGECGKMRFGPHVTKHTGEKPYMCGEC-GYRTTQKHNLLRH-- 158
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
+RT + C CDY + + H+ HTG+KPY CG+C +R+A A L
Sbjct: 159 -----MRTHTGEKPYKCDQCDYSAAEKSTLDDHMTKHTGQKPYMCGECGYRTALRANLSR 213
Query: 194 HLK 196
H+K
Sbjct: 214 HMK 216
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY CG+C +R+ + L H++
Sbjct: 355 MRTHTGEKPYKCDQCDYSAAEKSSLDQHLAKHTGEKPYMCGECGYRTTYKSDLSKHMR 412
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A + L HL K
Sbjct: 336 YMCGECGYRAACKSNLSRHMRTHTGEKPYKCDQCDYSAAEKSSLDQHLAK 385
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT ++C CDY + + H+ H+GEKPY CG+C +R+A + L H++
Sbjct: 299 MRTHTGEKLYMCDHCDYSTTQKSSLDIHLAKHSGEKPYMCGECGYRAACKSNLSRHMR 356
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A + L H+ K
Sbjct: 392 YMCGECGYRTTYKSDLSKHMRTHTGEKPYKCDQCDYSAAEKSTLDDHMTK 441
Score = 43.1 bits (100), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A + L H+ K
Sbjct: 140 YMCGECGYRTTQKHNLLRHMRTHTGEKPYKCDQCDYSAAEKSTLDDHMTK 189
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C CDY + + H+ H+GEKPY C +C +R+A + L H++
Sbjct: 252 YMCDHCDYSTTQKSSLDIHLAKHSGEKPYMCDKCGYRAACKSNLSRHMR 300
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
+RT + C CDY + + H+ HTG+KPY CG+C
Sbjct: 411 MRTHTGEKPYKCDQCDYSAAEKSTLDDHMTKHTGQKPYMCGECG 454
>gi|118089216|ref|XP_420057.2| PREDICTED: zinc finger protein 91 [Gallus gallus]
Length = 812
Score = 49.7 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 8/52 (15%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKK 197
+ C C Y + + G + H+R HTGEKP+ CGQC AFR++S HLK+
Sbjct: 725 YTCEECGYTTVHNGNFKQHLRIHTGEKPFKCGQCGVAFRTSS------HLKR 770
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 8/52 (15%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA--FRSASVAGLHYHLKK 197
+ C C+Y +Y + ++ H+RTHTGEKPY+C C FR++S HLK+
Sbjct: 625 YQCAECEYSTYILSNLKLHVRTHTGEKPYSCSVCQKEFRTSS------HLKR 670
>gi|339250270|ref|XP_003374120.1| zinc finger protein [Trichinella spiralis]
gi|316969624|gb|EFV53687.1| zinc finger protein [Trichinella spiralis]
Length = 859
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C C+ +T+ ELI H R ++ + HK C C Y S + ++ HIR+HTGE
Sbjct: 439 CKGCELAFTTS-GELIRHIRYKHTLEKP----HK--CTECSYASVELSKLKRHIRSHTGE 491
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
+PY C C++ S L HL+
Sbjct: 492 RPYHCPHCSYASPDTYKLKRHLR 514
Score = 39.3 bits (90), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 25/49 (51%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFR 184
K IR+ + C C Y S + ++ H+R HTGEKPY C C R
Sbjct: 482 KRHIRSHTGERPYHCPHCSYASPDTYKLKRHLRVHTGEKPYQCEVCNQR 530
>gi|260806167|ref|XP_002597956.1| hypothetical protein BRAFLDRAFT_79800 [Branchiostoma floridae]
gi|229283226|gb|EEN53968.1| hypothetical protein BRAFLDRAFT_79800 [Branchiostoma floridae]
Length = 512
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+ C CDYF+ N G + H+ HTGEKPY C C F++ + + L H
Sbjct: 429 YQCEECDYFTTNKGSLAKHMAKHTGEKPYMCDVCGFKTGTKSTLAQH 475
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
C C+Y + N M HIRTHTGEKP+ C QC + ++ A L H++
Sbjct: 162 CPHCEYETINKPAMTQHIRTHTGEKPFKCQQCDYSASQTATLKKHIR 208
Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 10/92 (10%)
Query: 116 YCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFV----------CYACDYFSYNIGCMRS 165
Y K ++ + E HC C+ P K + C CDY + + ++
Sbjct: 331 YLKLHMANHTGEKPFHCELCEYSAARKPDLKKHMANHTGEKPHKCELCDYSATDRSHLKR 390
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
H+ THTGEKPY C C + +A ++ L H+ K
Sbjct: 391 HMTTHTGEKPYKCEICEYAAAQISSLRDHMTK 422
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C+Y + I +R H+ HTGEKPY C +C + + + L H+ K
Sbjct: 401 YKCEICEYAAAQISSLRDHMTKHTGEKPYQCEECDYFTTNKGSLAKHMAK 450
Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K + T + C CDY S +++H+ THTGEKPY C C + + ++ L H+
Sbjct: 277 KKHMNTHTGERPYKCQFCDYSSALKATLKTHMDTHTGEKPYKCEICDYSTVGMSYLKLHM 336
Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
C CDY + ++ H+ THTGEKPY C C+F + L H+
Sbjct: 70 CTLCDYSAVEKKRLKFHMATHTGEKPYKCEFCSFATHQKQNLKSHV 115
>gi|195167725|ref|XP_002024683.1| GL22491 [Drosophila persimilis]
gi|194108088|gb|EDW30131.1| GL22491 [Drosophila persimilis]
Length = 1135
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 8/88 (9%)
Query: 112 PFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHT 171
P C C+ V S+ + K +R+ +F C C+Y + + R H+ TH
Sbjct: 966 PQCSLCQRVFSSK--------SSLKLHLRSHQANKRFQCDTCEYEASDHNAFRRHLATHR 1017
Query: 172 GEKPYACGQCAFRSASVAGLHYHLKKTY 199
K YAC C FR+ HL+K +
Sbjct: 1018 DRKRYACPHCDFRAIQSTAFRIHLQKRH 1045
>gi|432950076|ref|XP_004084377.1| PREDICTED: uncharacterized protein LOC101162891 [Oryzias latipes]
Length = 1110
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 19/120 (15%)
Query: 79 CKHCHSQLS-HLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
CK C S DL H +T + PF C CK S T K
Sbjct: 626 CKECDKSFSCIFDLKTHMRT---------HTGEKPFSCKECKKSFS--------QLSTLK 668
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ +RT F C C + N +++H+RTHTGEKP++C C + ++ L H++
Sbjct: 669 THMRTHTGEKPFSCQECKKYFRNTSHLKAHMRTHTGEKPFSCTDCDKSFSRISLLKRHMR 728
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 48/118 (40%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
CK C S L L ++M FS C CK N + L H
Sbjct: 654 CKECKKSFSQLSTLK-----THMRTHTGEKPFS--CQECKKYFR-NTSHLKAH------- 698
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CD I ++ H+R HTGEKP++C +C ++ L H++
Sbjct: 699 MRTHTGEKPFSCTDCDKSFSRISLLKRHMRIHTGEKPFSCKECKKSFNQISHLKRHMR 756
Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT F C C+ + +++H+RTHTGEKP++C C + ++ L H+
Sbjct: 752 KRHMRTHTGEKPFSCKECNKSFSQLSTLKTHMRTHTGEKPFSCTDCDKGFSRISLLKRHM 811
Query: 196 K 196
+
Sbjct: 812 R 812
Score = 43.5 bits (101), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CD +I ++ H+RTHTGEKP++C +C + + L H++
Sbjct: 596 FSCNECDKNFSHISNLKRHMRTHTGEKPFSCKECDKSFSCIFDLKTHMR 644
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 40/99 (40%), Gaps = 18/99 (18%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
CK +Q+SHL +M FS C C N+ T K+
Sbjct: 741 CKKSFNQISHLK--------RHMRTHTGEKPFS--CKEC--------NKSFSQLSTLKTH 782
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA 177
+RT F C CD I ++ H+RTHTGE P++
Sbjct: 783 MRTHTGEKPFSCTDCDKGFSRISLLKRHMRTHTGEMPFS 821
>gi|257146489|emb|CAX20948.1| putative insulator protein [Trichinella spiralis]
Length = 948
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C C+ +T+ ELI H R ++ + HK C C Y S + ++ HIR+HTGE
Sbjct: 466 CKGCELAFTTS-GELIRHIRYKHTLEKP----HK--CTECSYASVELSKLKRHIRSHTGE 518
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
+PY C C++ S L HL+
Sbjct: 519 RPYHCPHCSYASPDTYKLKRHLR 541
Score = 39.3 bits (90), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 25/49 (51%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFR 184
K IR+ + C C Y S + ++ H+R HTGEKPY C C R
Sbjct: 509 KRHIRSHTGERPYHCPHCSYASPDTYKLKRHLRVHTGEKPYQCEVCNQR 557
>gi|432957023|ref|XP_004085761.1| PREDICTED: zinc finger and SCAN domain-containing protein 2-like,
partial [Oryzias latipes]
Length = 404
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 56/139 (40%), Gaps = 29/139 (20%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLS----------TNLNE 127
CK C+ SH L IR + + PF C CK S T+ E
Sbjct: 169 CKECNKSFSHRSSL------KTHIRTHTGD--KPFTCKECKKSFSRRSSLKIHMRTHTGE 220
Query: 128 LIEHCRTC-KSMI---------RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA 177
C+ C KS I RT F C CD I +++HIRTHTGEKP+
Sbjct: 221 KPFTCKECDKSFIKLYNLKIHMRTHTGEKPFTCKECDATFSRICTLKTHIRTHTGEKPFT 280
Query: 178 CGQCAFRSASVAGLHYHLK 196
C +C ++ L HLK
Sbjct: 281 CKECKISFYQISTLKTHLK 299
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
K+ +RT F C CD ++ H+RTHTGEKP+ C +C R
Sbjct: 323 KTHMRTHTGEKPFTCKECDTSFSEKSKLKRHMRTHTGEKPFTCKECKIREK 373
Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CD +++H+RTHTGEKP+ C +C + + L H++
Sbjct: 307 FTCKECDKSFSEKSKLKTHMRTHTGEKPFTCKECDTSFSEKSKLKRHMR 355
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C+ + +++HIRTHTG+KP+ C +C + + L H++
Sbjct: 167 FTCKECNKSFSHRSSLKTHIRTHTGDKPFTCKECKKSFSRRSSLKIHMR 215
Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 6/46 (13%)
Query: 132 CRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA 177
C+ CK IR PF C CD I ++ H+RTHTGEKP+
Sbjct: 365 CKECK--IREKPF----TCKECDKSFSRISTLKIHMRTHTGEKPFT 404
>gi|260795597|ref|XP_002592791.1| hypothetical protein BRAFLDRAFT_195609 [Branchiostoma floridae]
gi|229278015|gb|EEN48802.1| hypothetical protein BRAFLDRAFT_195609 [Branchiostoma floridae]
Length = 357
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 17/119 (14%)
Query: 79 CKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKS 137
C+ C+SQ S L DL H +T + + FC L L +H +T
Sbjct: 246 CEECNSQFSQLSDLERHMRTHTGEKPYQCDECSRQFC---------ELGSLKKHMQT--- 293
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
PFR C C +G +++H+RTHTGEKPY C +C+ + + + L H++
Sbjct: 294 HTGEKPFR----CEECSRQFSELGALKTHMRTHTGEKPYKCKECSRQFSELGNLKKHIR 348
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C N+ + HIRTHTGEKPY CG+C+ + + ++ L H+
Sbjct: 148 KTHMRTHTGEKPYKCEECSREFSNLSNLNKHIRTHTGEKPYKCGECSTQFSQLSNLKSHM 207
Query: 196 K 196
+
Sbjct: 208 R 208
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 58/139 (41%), Gaps = 29/139 (20%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRT---- 134
C+ C Q SHLD L ++M + C C S NL+ L +H RT
Sbjct: 134 CEECSKQFSHLDSLK-----THMRTHTGEKPYK--CEECSREFS-NLSNLNKHIRTHTGE 185
Query: 135 -----------------CKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA 177
KS +RT + C C+ + ++ H+RTHTGEKPY
Sbjct: 186 KPYKCGECSTQFSQLSNLKSHMRTHTGEKPYTCEECNKQFNQLSDLKKHMRTHTGEKPYR 245
Query: 178 CGQCAFRSASVAGLHYHLK 196
C +C + + ++ L H++
Sbjct: 246 CEECNSQFSQLSDLERHMR 264
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 56/132 (42%), Gaps = 15/132 (11%)
Query: 79 CKHCHSQLSHL-DLLDHCKTCSYMIRPNA---NNTFSPFCIYCKAVLSTNLNELIEHCRT 134
C+ C Q S L DL H +T + N N F + KA + T+ E C
Sbjct: 22 CEECSRQFSRLGDLKRHMRTHTGEKPYNCEECNKQFGKL-GHLKAHMRTHTGEKPYRCEE 80
Query: 135 C----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFR 184
C K +RT + C C +G ++ HIRTHT EKPY C +C+ +
Sbjct: 81 CSRQFIQLGNLKRHMRTHTGEKPYDCEECSKQFSQLGALKRHIRTHTKEKPYRCEECSKQ 140
Query: 185 SASVAGLHYHLK 196
+ + L H++
Sbjct: 141 FSHLDSLKTHMR 152
Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C +G ++ H+RTHTGEKPY C +C + + L H+
Sbjct: 8 KTHMRTHTGEKPYKCEECSRQFSRLGDLKRHMRTHTGEKPYNCEECNKQFGKLGHLKAHM 67
Query: 196 K 196
+
Sbjct: 68 R 68
Score = 42.4 bits (98), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C C +Q S L L S+M ++ C C + L++L +H RT
Sbjct: 190 CGECSTQFSQLSNLK-----SHMRTHTGEKPYT--CEECNKQFN-QLSDLKKHMRT---H 238
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C C+ + + H+RTHTGEKPY C +C+ + + L H++
Sbjct: 239 TGEKPYR----CEECNSQFSQLSDLERHMRTHTGEKPYQCDECSRQFCELGSLKKHMQ 292
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 27/37 (72%)
Query: 160 IGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+G +++H+RTHTGEKPY C +C+ + + + L H++
Sbjct: 4 LGHLKTHMRTHTGEKPYKCEECSRQFSRLGDLKRHMR 40
>gi|260823140|ref|XP_002604041.1| hypothetical protein BRAFLDRAFT_71669 [Branchiostoma floridae]
gi|229289366|gb|EEN60052.1| hypothetical protein BRAFLDRAFT_71669 [Branchiostoma floridae]
Length = 546
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+R HTGEKPY CG C +R+A ++ + H++
Sbjct: 455 MRTHTGERPYKCDQCDYSAAQKCALAQHMRKHTGEKPYMCGVCGYRAAKMSNVSDHMR 512
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGE PY CG+C +R+A A L H++
Sbjct: 408 YKCNQCDYTVAHKSSLNDHMLKHTGENPYKCGECGYRTAKKANLFRHMR 456
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H++ HTGEKP+ CG+C +RSA L H+K
Sbjct: 295 YLCGECGYRTAKKDHLTEHLKIHTGEKPFMCGECGYRSAHKCHLSEHMK 343
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C Y + + H+RTHTGE+PY C QC + +A L H++K
Sbjct: 436 YKCGECGYRTAKKANLFRHMRTHTGERPYKCDQCDYSAAQKCALAQHMRK 485
Score = 42.7 bits (99), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + + H+RTHTGEKP+ C QC F +A + L H
Sbjct: 85 YMCGECGYRAAQKHHLSRHMRTHTGEKPFKCDQCDFSAAQKSTLDNH 131
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+R HTGEKPY C QC + A + L+ H+
Sbjct: 380 YICGECGYRTTQKAHLSQHMRIHTGEKPYKCNQCDYTVAHKSSLNDHM 427
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C Y S + + H++THTGEKP+ C QC + +A + H+
Sbjct: 323 FMCGECGYRSAHKCHLSEHMKTHTGEKPFKCDQCDYSAAQKTHMDRHI 370
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASV 188
+C C Y + N + H+RTHTGEKPY C QC + SA+V
Sbjct: 143 MCGECGYRTANKTHLSRHMRTHTGEKPYKCDQCDY-SATV 181
Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 148 FVCYACDYFSYNIGCMRSHI-RTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CDY + M HI H+ EKPY CG+C +R+ A L H++
Sbjct: 351 FKCDQCDYSAAQKTHMDRHIVAKHSDEKPYICGECGYRTTQKAHLSQHMR 400
Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Query: 159 NIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
N+G H+ HTGEKPY CG+C +R+A L H++
Sbjct: 71 NVG---RHVVKHTGEKPYMCGECGYRAAQKHHLSRHMR 105
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HT EKPY C QC + ++ + L HL K
Sbjct: 198 YMCEVCGYRTAQKFNLSRHMRIHTEEKPYKCDQCNYSASERSKLDKHLPK 247
Score = 36.2 bits (82), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + + H+R H GEK Y C C + +A + L HLK
Sbjct: 492 YMCGVCGYRAAKMSNVSDHMRAHIGEKHYKCDMCNYSAARKSQLFGHLK 540
>gi|195049030|ref|XP_001992639.1| GH24097 [Drosophila grimshawi]
gi|193893480|gb|EDV92346.1| GH24097 [Drosophila grimshawi]
Length = 508
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
FVC +C Y N +R H+R+HTGE+P+ C C R S +GL H+
Sbjct: 395 FVCESCGYSCRNKETLRVHLRSHTGERPFGCKVCEKRFPSHSGLREHM 442
>gi|426392250|ref|XP_004062469.1| PREDICTED: transcriptional repressor CTCFL isoform 5 [Gorilla
gorilla gorilla]
Length = 613
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 324 TSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 383
Query: 190 GLHYHLK 196
L H++
Sbjct: 384 KLKRHMR 390
Score = 49.3 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H +T K+ +F C C Y M +HIRTHTGE
Sbjct: 410 CRYCSAVFHERY-ALIQHQKTHKN-------EKRFKCKHCSYACKQERHMTAHIRTHTGE 461
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KP+ C C FR + H+ + YH
Sbjct: 462 KPFTCLFCNKCFRQKQLLNAHF---RKYH 487
Score = 39.3 bits (90), Expect = 0.81, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 130 EHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSAS 187
E ++ K+ +T + F C C + S + H++THT EKP+ C C FR+ +
Sbjct: 239 EKAKSTKNQRKTKGAKRTFHCDVCMFISSRMSSFNRHMKTHTNEKPHLCHLCLKTFRTVT 298
Query: 188 VAGLH 192
+ H
Sbjct: 299 LLRNH 303
Score = 36.2 bits (82), Expect = 7.5, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKTY 199
+C+ C + +R+H+ THTG +PY C C AF ++ H K T+
Sbjct: 286 LCHLCLKTFRTVTLLRNHVNTHTGTRPYKCNDCNMAFVTSGELVRHRRYKHTH 338
>gi|260788935|ref|XP_002589504.1| hypothetical protein BRAFLDRAFT_88363 [Branchiostoma floridae]
gi|229274682|gb|EEN45515.1| hypothetical protein BRAFLDRAFT_88363 [Branchiostoma floridae]
Length = 676
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 118 KAVLSTNLNELIEHCRTCKS-----MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTG 172
K +T ++L EH RT + + + ++C C Y + + H+RTHTG
Sbjct: 362 KPYKTTQKSDLSEHMRTHTGQKPYKLPEANTGKKPYMCGDCGYRTAKKSHLSDHMRTHTG 421
Query: 173 EKPYACGQCAFRSASVAGLHYHLKK 197
EKPY C QC + +A + + YHL K
Sbjct: 422 EKPYKCEQCDYSAAKKSHVDYHLAK 446
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 104 PNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGC 162
P AN P+ C C + + L +H +RT + C CDY +
Sbjct: 388 PEANTGKKPYMCGDC-GYRTAKKSHLSDH-------MRTHTGEKPYKCEQCDYSAAKKSH 439
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ H+ HTG+KPY CG+C +R+A + L H+K
Sbjct: 440 VDYHLAKHTGDKPYMCGKCEYRTAHKSHLSRHMK 473
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + N + H+RTHTGEKPY C QC + + + L+ HL
Sbjct: 280 YMCGECGYRTANKSHLSDHVRTHTGEKPYKCDQCDYSATQSSALYQHL 327
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CDY + + H+ HTG+KPY CG+C +R+A + L H++
Sbjct: 19 MRTHTGEKPFKCDQCDYSAARRSNLNRHLAEHTGDKPYMCGECGYRAARKSNLSDHMR 76
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y S + H+RTHTGEKPY C QC + +A + L+ HL
Sbjct: 565 YMCEECGYRSAQKSHLSRHMRTHTGEKPYKCDQCDYSAAQTSTLNQHL 612
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KPY CG+C +R+A L H++
Sbjct: 299 VRTHTGEKPYKCDQCDYSATQSSALYQHLAVHTGDKPYMCGECGYRTAKKCTLSRHMR 356
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + C CDY + + H+ HTGEKPY CG+C +R+ + L H+
Sbjct: 584 MRTHTGEKPYKCDQCDYSAAQTSTLNQHLAMHTGEKPYMCGECGYRTYRKSHLSEHM 640
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + H+ HTG+KPY CG+C +R+A+ + L H++
Sbjct: 243 MRTHTGYKPYKCDLCDYSAAHKSALNQHLAKHTGDKPYMCGECGYRTANKSHLSDHVR 300
Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CDY + + H+ HTGEKPY C +C +RSA + L H++
Sbjct: 537 FKCEQCDYSAARKYHLDRHLAKHTGEKPYMCEECGYRSAQKSHLSRHMR 585
Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A HL K
Sbjct: 56 YMCGECGYRAARKSNLSDHMRTHTGEKPYKCDQCDYSAAHKKSFDLHLAK 105
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y +Y + H+ THTG KPY C QC + SA+ L H+ K
Sbjct: 621 YMCGECGYRTYRKSHLSEHMSTHTGYKPYKCDQCDYSSATKFNLDRHVSK 670
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + +H+RTHTGEKPY C QC + +A + L+ +L K
Sbjct: 168 YMCEECRYRTTKKSDLVNHMRTHTGEKPYKCDQCDYSAAHKSTLNQNLAK 217
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+C C Y + + H+RTHTGEKP+ C QC + +A + L+ HL
Sbjct: 1 MCGECGYRTAWESTLSRHMRTHTGEKPFKCDQCDYSAARRSNLNRHL 47
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
K+ R P++ C CDY + + + H HTG KPY CG+C +R+A
Sbjct: 473 KTHTRQKPYK----CEKCDYSAASKYQLDQHQAKHTGYKPYMCGECGYRTA 519
Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
+RT + C CDY + + H+ HTG+KPY CG+C +R+
Sbjct: 75 MRTHTGEKPYKCDQCDYSAAHKKSFDLHLAKHTGDKPYMCGECGYRT 121
Score = 40.0 bits (92), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTG KPY C C + +A + L+ HL K
Sbjct: 224 YMCGECGYRTAWKSALSDHMRTHTGYKPYKCDLCDYSAAHKSALNQHLAK 273
Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C+Y + + + H++THT +KPY C +C + +AS L H K
Sbjct: 453 YMCGKCEYRTAHKSHLSRHMKTHTRQKPYKCEKCDYSAASKYQLDQHQAK 502
>gi|291221175|ref|XP_002730599.1| PREDICTED: zinc finger protein 197-like [Saccoglossus kowalevskii]
Length = 851
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C+ +GC+ SH+R HTGE+PY C +C R A +GL H++
Sbjct: 472 YQCKECNKRFSQVGCLISHMRVHTGERPYQCKECNQRFAHSSGLKVHMR 520
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 136 KSMIRTDPFRHKFVCYACDY-FSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
K+ +R H + C C+ F Y G +R H R HTGEKPY C +C R GL H
Sbjct: 404 KTHMRLHTGEHPYQCKECNRRFRYVSGLIR-HRRVHTGEKPYQCKECNRRFTWAGGLKIH 462
Query: 195 LK 196
++
Sbjct: 463 MR 464
Score = 39.7 bits (91), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
R + C CD +G ++ H++ HTG++PY C +C A L H
Sbjct: 20 RQMYQCKKCDEKFAEVGDLKKHVKVHTGQQPYRCNKCDKNFAKSGDLKRH 69
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 148 FVCYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C+ YF+ +++HIR HTGEKP+ C +C R + L H++
Sbjct: 192 FKCNVCNKYFTQKYN-LKTHIRVHTGEKPFQCKECDKRFSQKTHLIQHMR 240
Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C+ G ++ H+R HTGE+PY C +C R + V L H++
Sbjct: 444 YQCKECNRRFTWAGGLKIHMRLHTGEQPYQCKECNKRFSQVGCLISHMR 492
Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
Query: 111 SPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRT 169
PF C C S + LI+H R + TD + C C+ ++ H+R
Sbjct: 218 KPFQCKECDKRFSQKTH-LIQHMR-----VHTDER--PYQCKECNNSFSQASVLKVHMRQ 269
Query: 170 HTGEKPYACGQCAFRSASVAGLHYHLK 196
HTGEKPY C +C R L H++
Sbjct: 270 HTGEKPYQCKECNKRFTQNIHLKEHMR 296
Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C+ +++H+R HTGEKPY C +C R L H++
Sbjct: 360 FQCNDCEKKFPRQYLLKTHMRMHTGEKPYKCNECEKRFTEKCSLKTHMR 408
Score = 36.2 bits (82), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 137 SMIRTDPFRHKFVCYACDY-FSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
S +R + C C+ F+++ G ++ H+R HTGEKPY C +C R + L H+
Sbjct: 489 SHMRVHTGERPYQCKECNQRFAHSSG-LKVHMRVHTGEKPYQCKECNQRFSIRNTLKSHM 547
Query: 196 K 196
+
Sbjct: 548 R 548
Score = 36.2 bits (82), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 11/89 (12%)
Query: 107 NNTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRS 165
+N PF C C + N K+ IR F C CD +
Sbjct: 186 HNAKKPFKCNVCNKYFTQKYN--------LKTHIRVHTGEKPFQCKECDKRFSQKTHLIQ 237
Query: 166 HIRTHTGEKPYACGQC--AFRSASVAGLH 192
H+R HT E+PY C +C +F ASV +H
Sbjct: 238 HMRVHTDERPYQCKECNNSFSQASVLKVH 266
>gi|260813390|ref|XP_002601401.1| hypothetical protein BRAFLDRAFT_103418 [Branchiostoma floridae]
gi|229286696|gb|EEN57413.1| hypothetical protein BRAFLDRAFT_103418 [Branchiostoma floridae]
Length = 331
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + G ++ H+ HTGEKPY CG+C +R+ L H++
Sbjct: 131 MRTHTGEKPYKCDQCDYSAAQKGELKKHLAKHTGEKPYMCGECGYRTIRKDNLSLHMR 188
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C+Y + + H+RTHTGEKPY C QC + +A L HL K
Sbjct: 112 YMCGECEYRTVKKSHLSRHMRTHTGEKPYKCDQCDYSAAQKGELKKHLAK 161
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 105 NANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCM 163
N + P+ C+ C+ + ++L H RT + P++ C CDY + +
Sbjct: 20 NTHTGEKPYKCVECEH-RAAQKSDLSRHMRT---HTKDRPYK----CDQCDYSAAQKSDL 71
Query: 164 RSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
H+RTHTG+KPY C QC + +A L HL K
Sbjct: 72 SKHMRTHTGDKPYRCDQCDYSAARKFSLDQHLSK 105
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C+ C Y + H+R+HTGEKPY C QC + +A L +HL K
Sbjct: 280 YMCWECGYRVAQNSDLSRHMRSHTGEKPYKCDQCDYSAAHKPSLDHHLAK 329
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY CG+C +R+ + L H++
Sbjct: 75 MRTHTGDKPYRCDQCDYSAARKFSLDQHLSKHTGEKPYMCGECEYRTVKKSHLSRHMR 132
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 26/49 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + H R HTGEKPY CG C +R+A L H++
Sbjct: 196 YKCDQCDYSFAEKSKLGRHRRKHTGEKPYMCGDCGYRTAVKCNLSTHIR 244
Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IR+ + C CD N + H+R HTGEKPY C +C +R A + L H++
Sbjct: 243 IRSHTGEKPYKCDQCDVSVANKSHLNRHLRKHTGEKPYMCWECGYRVAQNSDLSRHMR 300
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + +HIR+HTGEKPY C QC A+ + L+ HL+K
Sbjct: 224 YMCGDCGYRTAVKCNLSTHIRSHTGEKPYKCDQCDVSVANKSHLNRHLRK 273
Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+C C Y + + H+ THTGEKPY C +C R+A + L H++
Sbjct: 1 MCGECGYKTARKYHLSLHMNTHTGEKPYKCVECEHRAAQKSDLSRHMR 48
Score = 36.2 bits (82), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HTGEK Y C QC + A + L H +K
Sbjct: 168 YMCGECGYRTIRKDNLSLHMRNHTGEKLYKCDQCDYSFAEKSKLGRHRRK 217
>gi|281346339|gb|EFB21923.1| hypothetical protein PANDA_020844 [Ailuropoda melanoleuca]
Length = 671
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 23/104 (22%)
Query: 112 PF-CIYCKAVLSTNLNELIEH----------CRTC----------KSMIRTDPFRHKFVC 150
PF C C + N N ++ C+ C +S +RT F C
Sbjct: 427 PFECAQCGKTFTRNFNLILHQRNHTGEKPYECKDCGKAFNQPSSLRSHVRTHTGEKPFGC 486
Query: 151 YACDYFSYNIGCMRSHIRTHTGEKPYACGQCA--FRSASVAGLH 192
C +++H+RTHT EKPYAC QC FR+++ +H
Sbjct: 487 AQCGKAFREHSSLKTHLRTHTREKPYACSQCGKPFRTSTHLNVH 530
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C C VLS T KS +RT +VC C +R H RTHTG+
Sbjct: 542 CATCGQVLS--------RLSTLKSHMRTHTGEKPYVCQECGRAFSEPSSLRKHARTHTGK 593
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
KPYAC +C + L H++
Sbjct: 594 KPYACQECGRAFGQSSHLLVHVR 616
Score = 44.7 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 10/89 (11%)
Query: 118 KAVLSTNLNELIEHCRTCKSMIRTDPFR--HK--------FVCYACDYFSYNIGCMRSHI 167
K L T+ E C C RT HK + C C + ++SH+
Sbjct: 500 KTHLRTHTREKPYACSQCGKPFRTSTHLNVHKRIHTGEKLYECATCGQVLSRLSTLKSHM 559
Query: 168 RTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RTHTGEKPY C +C + + L H +
Sbjct: 560 RTHTGEKPYVCQECGRAFSEPSSLRKHAR 588
Score = 43.5 bits (101), Expect = 0.045, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 12/62 (19%)
Query: 132 CRTCKSMIR--TDPFRHK--------FVCYAC-DYFSYNIGCMRSHIRTHTGEKPYACGQ 180
C C+ R +D RH+ F C C F Y+ +R H+RTHTGEKP+ C Q
Sbjct: 374 CSKCEKAFRYSSDLSRHEKTHTAEKCFECQECRQAFKYSSN-LRRHLRTHTGEKPFECAQ 432
Query: 181 CA 182
C
Sbjct: 433 CG 434
>gi|260841554|ref|XP_002613977.1| hypothetical protein BRAFLDRAFT_118465 [Branchiostoma floridae]
gi|229299367|gb|EEN69986.1| hypothetical protein BRAFLDRAFT_118465 [Branchiostoma floridae]
Length = 1413
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C Y S + H++ HTGE+PY C QC FR++ ++ HL++
Sbjct: 1078 FACDLCPYKSVKKSALTRHMKKHTGERPYQCDQCGFRASQKETINRHLER 1127
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C Y +Y+ + H R HTGEKP+ C +C F +A L H+ K
Sbjct: 313 FACRTCKYRAYSRSTLEEHERIHTGEKPFKCDRCNFSTAHKKCLRTHMSK 362
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C + ++N + H+R+HTGE+P+ C C F +A + L H+
Sbjct: 824 FLCEECGFCAFNSTSFKRHVRSHTGERPFKCELCDFATAQKSHLKRHM 871
Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ K C C + S + C+ +H+ THTGEKP+ C C F S L HL +
Sbjct: 878 LKKKHACTLCSFRSESRTCLATHMNTHTGEKPFKCHLCDFASGHKRSLEQHLAR 931
Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K C C Y + N C+ H+RTHTGE+P+ C C + + L H+
Sbjct: 254 KHRCQDCGYIALNKSCLTRHMRTHTGERPFKCSLCNYATTQSCHLDRHM 302
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 16/120 (13%)
Query: 79 CKHCHSQLSHLDLLD-HCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKS 137
C HC Q + LD H K+ S N TF C +C STN + +E
Sbjct: 18 CSHCGYQTTRKCSLDRHKKSHS------GNKTFK--CEHCD--YSTNSEQYLE----VHQ 63
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
M T P + +++C C Y + + +H RTH G K + C +C F ++ L H K+
Sbjct: 64 MKHTGPGK-RYLCGECGYSTGSKSQFTTHSRTHAGGKSFKCDKCDFSASQKVQLDRHQKR 122
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Query: 132 CRTCK--SMIRTDPFRHK--------FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
CRTCK + R+ H+ F C C++ + + C+R+H+ HT E+ C QC
Sbjct: 315 CRTCKYRAYSRSTLEEHERIHTGEKPFKCDRCNFSTAHKKCLRTHMSKHTKEEELQCVQC 374
Query: 182 AFRSASVAGLHYHLKK 197
++++ S L+ H K
Sbjct: 375 SYKAPSGYALYMHAMK 390
Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F C C Y + + H+R H+ EKP+ C QC F +A HL
Sbjct: 730 FSCSHCKYKTKQKVQLERHMRHHSKEKPFKCDQCNFTTAYEQSFKQHL 777
>gi|260781003|ref|XP_002585618.1| hypothetical protein BRAFLDRAFT_111657 [Branchiostoma floridae]
gi|229270636|gb|EEN41629.1| hypothetical protein BRAFLDRAFT_111657 [Branchiostoma floridae]
Length = 506
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CD+ + + H+R H+GEKPY CG+C FR+A + L H++
Sbjct: 122 FKCDQCDFSAADRYTFIRHLRKHSGEKPYMCGECGFRAARKSTLSEHMR 170
>gi|194763695|ref|XP_001963968.1| GF20977 [Drosophila ananassae]
gi|190618893|gb|EDV34417.1| GF20977 [Drosophila ananassae]
Length = 461
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
FVC +C Y N +R HIR+HTGE+P+ C C R S +GL H+
Sbjct: 348 FVCESCGYSCRNKETLRVHIRSHTGERPFGCQVCDKRFPSHSGLREHM 395
>gi|432953118|ref|XP_004085296.1| PREDICTED: oocyte zinc finger protein XlCOF6-like, partial [Oryzias
latipes]
Length = 406
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 102 IRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNI 160
++ N N PF C CK S + +L H +RT F C CD I
Sbjct: 30 LKRNQGNCEKPFTCKECKKSFS-QICDLKTH-------MRTHTGEKPFTCKECDTSFSRI 81
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++ H+RTHTGEKP++C +C + ++ L+ H++
Sbjct: 82 SHLKIHMRTHTGEKPFSCKECKRSFSQISSLNSHMR 117
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 65/156 (41%), Gaps = 28/156 (17%)
Query: 46 ITAQLVLMSLDQILNLNLSVLLVTTIPTQNHSLCKHCH---SQLSHLDLLDHCKTCSYMI 102
T + S QI +L + T + CK C S++SHL + +M
Sbjct: 41 FTCKECKKSFSQICDLKTHMRTHTG---EKPFTCKECDTSFSRISHLKI--------HMR 89
Query: 103 RPNANNTFSPFCIYCKAVLS--TNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNI 160
FS C CK S ++LN S +RT F C CD +
Sbjct: 90 THTGEKPFS--CKECKRSFSQISSLN----------SHMRTHTGEKPFYCEECDTSFSDS 137
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+++H+RTHTGEKP+ C +C + ++ L H++
Sbjct: 138 SNLKTHMRTHTGEKPFTCKECKRSFSQISNLKAHMR 173
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT F C CD I ++SH+R HTGEKP+ C +C + + L H+
Sbjct: 281 KKHMRTHTGEKPFTCKECDKSFSQISNLKSHMRIHTGEKPFPCNKCDASFSRIPLLKTHM 340
Query: 196 K 196
K
Sbjct: 341 K 341
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C + N ++ H+RTHTGEKP+ C +C + + L H++
Sbjct: 181 FSCQECKKYFGNTSHLKVHMRTHTGEKPFTCKECKKSFSQIYDLKTHMR 229
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ ++T +F C C I +++H+R HTGEKP++C +C + ++ L H+
Sbjct: 337 KTHMKTHTGEKQFSCKECGGSFSQISRLKNHMRIHTGEKPFSCKECDSSFSQISHLKRHM 396
Query: 196 K 196
+
Sbjct: 397 R 397
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C C I +++H+RTHTGEKP+ C +C + + L H++
Sbjct: 200 MRTHTGEKPFTCKECKKSFSQIYDLKTHMRTHTGEKPFTCKECDKSFSEKSKLKKHMR 257
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
KS +R F C CD I +++H++THTGEK ++C +C + ++ L H+
Sbjct: 309 KSHMRIHTGEKPFPCNKCDASFSRIPLLKTHMKTHTGEKQFSCKECGGSFSQISRLKNHM 368
Query: 196 K 196
+
Sbjct: 369 R 369
Score = 35.8 bits (81), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 50/131 (38%), Gaps = 18/131 (13%)
Query: 46 ITAQLVLMSLDQILNLNLSVLLVTTIPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPN 105
T + S QI NL + + T + C C + S + LL ++M
Sbjct: 293 FTCKECDKSFSQISNLKSHMRIHTG---EKPFPCNKCDASFSRIPLLK-----THMKTHT 344
Query: 106 ANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRS 165
FS C C S ++ L H +R F C CD I ++
Sbjct: 345 GEKQFS--CKECGGSFS-QISRLKNH-------MRIHTGEKPFSCKECDSSFSQISHLKR 394
Query: 166 HIRTHTGEKPY 176
H+RTHTGEKP+
Sbjct: 395 HMRTHTGEKPF 405
>gi|297674435|ref|XP_002815233.1| PREDICTED: zinc finger protein 827 [Pongo abelii]
Length = 1511
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 19/134 (14%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCK---AVLSTNLN---ELIEHC 132
C CH + + L K C + PFCIY A + +L ++ C
Sbjct: 1211 CDVCHKFMKTPEQLLEHKKCHTV---PTGGLKCPFCIYSTNRPAAMECHLKTHYKMEYKC 1267
Query: 133 RTCKSM------IRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
R C+++ + T H+ + C C Y S + H+R HTGE+P+ C QC+
Sbjct: 1268 RICQTVKANQLELETHTREHRLGNHYKCDQCGYLSKTANKLIEHVRVHTGERPFHCDQCS 1327
Query: 183 FRSASVAGLHYHLK 196
+ L+ H K
Sbjct: 1328 YSCKRKDNLNLHKK 1341
>gi|260810947|ref|XP_002600184.1| hypothetical protein BRAFLDRAFT_204445 [Branchiostoma floridae]
gi|229285470|gb|EEN56196.1| hypothetical protein BRAFLDRAFT_204445 [Branchiostoma floridae]
Length = 408
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 119 AVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAC 178
A + ++LI+H +RT + C CDY + + H+ THTG+KPY C
Sbjct: 274 ATQKIDRSDLIKH-------MRTHTGERPYKCDQCDYSAAQKCTLVRHMTTHTGDKPYMC 326
Query: 179 GQCAFRSASVAGLHYHLKK 197
G+C +R+A + L H++K
Sbjct: 327 GECGYRAAFRSNLTVHMRK 345
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C C Y++ N + H+R HTGEKPY C QC + +A AGL H+ K
Sbjct: 12 CRECGYWTANKYYLALHMRKHTGEKPYKCDQCEYSAAHKAGLTQHMAK 59
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 143 PFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
P++ ++C C+Y + + + H+RTHTGE+PY C QC + +A L+ H+ K
Sbjct: 351 PYK-SYMCEECEYRTVDRSDLIKHMRTHTGERPYKCDQCDYSAAQKGTLNQHMYK 404
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + HIRTHTGEKP+ C QC + + + L+ H+ K
Sbjct: 122 YICEKCGYRTAHKSVLAQHIRTHTGEKPFKCDQCDYAATQGSNLNRHMAK 171
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 14/111 (12%)
Query: 95 CKTCSYMIRPNAN--------NTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFR 145
C C Y +N N P+ C+ C + + + +H RT P++
Sbjct: 152 CDQCDYAATQGSNLNRHMAKHNDVKPYLCVVC-GFSTVDKYYIAQHKRT---HTGEKPYK 207
Query: 146 HKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
C CDY + + + H+ HTGEKPY CG+C +R+ + + L H++
Sbjct: 208 CD-KCDKCDYSATHQSGLAQHMAKHTGEKPYMCGECGYRTDNKSVLSQHMR 257
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
++C C Y + N + H+RTH+GEKPY C QC +
Sbjct: 237 YMCGECGYRTDNKSVLSQHMRTHSGEKPYKCDQCDY 272
Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C+Y + + + H++TH GEKPY C Q + +A + L H+ K
Sbjct: 66 YMCEKCEYRTADKSLLSQHMKTHIGEKPYKCDQGDYSAAHHSSLVQHMDK 115
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C+Y + + + H+ HT EKPY C +C +R+A + L H+K
Sbjct: 38 YKCDQCEYSAAHKAGLTQHMAKHTDEKPYMCEKCEYRTADKSLLSQHMK 86
>gi|441638105|ref|XP_004090107.1| PREDICTED: transcriptional repressor CTCFL [Nomascus leucogenys]
Length = 714
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 345 TSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 404
Query: 190 GLHYHLK 196
L H++
Sbjct: 405 KLKRHMR 411
Score = 49.3 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV L++H +T K+ +F C C Y M +HIRTHTGE
Sbjct: 481 CRYCSAVFHERY-ALMQHQKTHKN-------EKRFKCEHCSYACKQERHMTAHIRTHTGE 532
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KP+ C C FR + H+ + YH
Sbjct: 533 KPFTCLSCNKCFRQKQLLNAHF---RKYH 558
Score = 43.9 bits (102), Expect = 0.041, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +R+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 379 KRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEKPYECHICHARFTQNGTMKTHI 438
Score = 37.7 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 130 EHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSAS 187
E ++ K+ +T + F C C + + + H++THT EKP+ C C FR+ +
Sbjct: 260 EKAKSTKNQRKTKGAKRTFHCDVCMFTASRMSSFNRHMKTHTNEKPHLCHLCLKTFRTVT 319
Query: 188 VAGLHYHL 195
+ H ++
Sbjct: 320 LLRNHVNI 327
>gi|363754553|ref|XP_003647492.1| hypothetical protein Ecym_6295 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891129|gb|AET40675.1| hypothetical protein Ecym_6295 [Eremothecium cymbalariae
DBVPG#7215]
Length = 663
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 40/88 (45%), Gaps = 9/88 (10%)
Query: 110 FSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIR 168
+ PF C +C ST + L +H IRT F C CD +R HIR
Sbjct: 543 YKPFKCPHCSKTFSTE-DILSQH-------IRTHSGERPFKCQFCDKRFTTSSSLRIHIR 594
Query: 169 THTGEKPYACGQCAFRSASVAGLHYHLK 196
THTGEKP AC C R + L H+K
Sbjct: 595 THTGEKPLACNVCGKRFNESSNLSKHMK 622
>gi|261289703|ref|XP_002604828.1| hypothetical protein BRAFLDRAFT_206424 [Branchiostoma floridae]
gi|229290156|gb|EEN60838.1| hypothetical protein BRAFLDRAFT_206424 [Branchiostoma floridae]
Length = 229
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F C CDY + + SH+ HTGEKPYAC +C FR+A L H+
Sbjct: 91 FKCSECDYKARKRSQLNSHMLRHTGEKPYACEECGFRAARRKTLQMHI 138
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ +C C Y + N MR+H HTGEKPY C C +RS S L H+K
Sbjct: 175 RHLCDQCGYRTANPSNMRTHKMIHTGEKPYKCDACGYRSNSRWNLKTHMK 224
Score = 43.1 bits (100), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C + + ++ HI THTGEKPY C C +R +AG+ H++
Sbjct: 119 YACEECGFRAARRKTLQMHIMTHTGEKPYKCPHCEYRCTVMAGVRKHVE 167
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 143 PFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P HK C CDY + N + +HI HT ++PY C +C +R+ + + L+ H++
Sbjct: 32 PRPHK--CPHCDYAAMNKNTLATHIARHTDDRPYVCEECGYRAVTQSILNKHVQ 83
>gi|260815187|ref|XP_002602355.1| hypothetical protein BRAFLDRAFT_234331 [Branchiostoma floridae]
gi|229287664|gb|EEN58367.1| hypothetical protein BRAFLDRAFT_234331 [Branchiostoma floridae]
Length = 398
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C+Y S G + H+ HTGEKPY CG+C +++AS + L+ H +
Sbjct: 55 YKCDQCEYSSARKGDLDKHMAKHTGEKPYMCGECGYKTASRSRLNEHAR 103
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+Y + + + HIR HTGEKPY C QC + SA L H+ K
Sbjct: 27 FACTDCNYRAASKVALSQHIRIHTGEKPYKCDQCEYSSARKGDLDKHMAK 76
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
C CDY + + G + H R HTGEKP+AC C +R+AS L H++
Sbjct: 1 CTECDYRAASKGSLVIHTRKHTGEKPFACTDCNYRAASKVALSQHIR 47
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKT 198
+RT F C CDY S G ++ H THTG K + C +C FR+A + L H+K+
Sbjct: 326 MRTHTGDKPFKCDQCDYASAQKGDVKRHKATHTGVKQHLCRECGFRTADKSSLSRHIKRK 385
Query: 199 Y 199
+
Sbjct: 386 H 386
Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H RTHTG KPY C QC + +A +GL H+
Sbjct: 195 YMCEKCGYRTATRSSLSVHKRTHTGVKPYKCDQCDYSAAQKSGLDQHM 242
Score = 43.1 bits (100), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
F C CDY + G + H+R HTGEK Y C C +R+A
Sbjct: 279 FKCDQCDYSAARKGTLDRHMRQHTGEKCYVCEDCGYRTA 317
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + H+ HTGEKPY C +C +R+A L H+ K
Sbjct: 223 YKCDQCDYSAAQKSGLDQHMLLHTGEKPYMCEKCGYRTAYRTSLSQHMSK 272
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
H+ HTG+KPY CG+C +R+A A L H+ K
Sbjct: 129 HMLLHTGDKPYMCGECGYRTARKANLTQHMTK 160
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+VC C Y + + H+RTHTG+KP+ C QC + SA + H
Sbjct: 307 YVCEDCGYRTALRFYLTVHMRTHTGDKPFKCDQCDYASAQKGDVKRH 353
>gi|195434903|ref|XP_002065441.1| GK14669 [Drosophila willistoni]
gi|194161526|gb|EDW76427.1| GK14669 [Drosophila willistoni]
Length = 673
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 9/100 (9%)
Query: 99 SYMIRPNANNTFSPFCIYCKAVLSTNLN--ELIEHCRTCKSMIRTDPFRHKFVCYACDYF 156
S + P+ N T P C C ++ LN +L +H R S I PF+ C C
Sbjct: 258 SVVPNPSINATLQPKCFQCSHCEASFLNAGDLSKHVR---SHITNKPFQ----CSICQKT 310
Query: 157 SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+IG + +HIR H+GEKPY C C + L H++
Sbjct: 311 FTHIGSLNTHIRIHSGEKPYKCELCPKAFTQSSSLMVHMR 350
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 30/81 (37%), Gaps = 10/81 (12%)
Query: 126 NELIEHCRTCKSMIRTDP----------FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKP 175
EL+ C C+ R F C CD G + H+R HTGEKP
Sbjct: 411 QELVYQCAICRQAFRASSELVQHMKCHLGEKPFTCNLCDRSFTQSGSLNIHMRIHTGEKP 470
Query: 176 YACGQCAFRSASVAGLHYHLK 196
+ C C + L H+K
Sbjct: 471 FQCKLCDKCFTQASSLSVHMK 491
>gi|426236037|ref|XP_004011981.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein ZFAT [Ovis
aries]
Length = 1228
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 267 FTCEYCNKVFKFKHSLQAHLRIHTKEKPYKCSQCSYASAIKANLNVHLRK 316
Score = 40.4 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 269 CEYC--------NKVFKFKHSLQAHLRIHTKEKPYKCSQCSYASAIKANLNVHLRKHTGE 320
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 321 K-FACDCCSFTCLSKGHLKVHVERVH 345
Score = 37.4 bits (85), Expect = 3.3, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 874 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 922
>gi|357613867|gb|EHJ68756.1| hypothetical protein KGM_12662 [Danaus plexippus]
Length = 727
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%)
Query: 128 LIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSAS 187
L +H + C+S KF C C Y + ++ H RTHTGEKPYAC C ++S
Sbjct: 471 LKQHSKNCESADSDLDKLGKFSCSQCAYRCQSPAILKIHERTHTGEKPYACTFCDYKSGQ 530
Query: 188 VAGLHYHL 195
+ H+
Sbjct: 531 KNNVAKHI 538
>gi|332207879|ref|XP_003253023.1| PREDICTED: transcriptional repressor CTCFL isoform 1 [Nomascus
leucogenys]
Length = 677
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 345 TSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 404
Query: 190 GLHYHLK 196
L H++
Sbjct: 405 KLKRHMR 411
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV L++H +T K+ +F C C Y M +HIRTHTGE
Sbjct: 481 CRYCSAVFHERY-ALMQHQKTHKN-------EKRFKCEHCSYACKQERHMTAHIRTHTGE 532
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KP+ C C FR + H+ + YH
Sbjct: 533 KPFTCLSCNKCFRQKQLLNAHF---RKYH 558
Score = 43.9 bits (102), Expect = 0.041, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +R+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 379 KRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEKPYECHICHARFTQNGTMKTHI 438
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 130 EHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSAS 187
E ++ K+ +T + F C C + + + H++THT EKP+ C C FR+ +
Sbjct: 260 EKAKSTKNQRKTKGAKRTFHCDVCMFTASRMSSFNRHMKTHTNEKPHLCHLCLKTFRTVT 319
Query: 188 VAGLHYHL 195
+ H ++
Sbjct: 320 LLRNHVNI 327
>gi|260795689|ref|XP_002592837.1| hypothetical protein BRAFLDRAFT_202102 [Branchiostoma floridae]
gi|229278061|gb|EEN48848.1| hypothetical protein BRAFLDRAFT_202102 [Branchiostoma floridae]
Length = 538
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
KS ++T + C C N+G ++SH+RTHTGEKPY C +C+ + + + L+ H+
Sbjct: 468 KSHMQTHTGEKPYRCEECSRQFCNLGSLKSHMRTHTGEKPYKCEKCSRQFSQLGALNSHM 527
Query: 196 K 196
+
Sbjct: 528 R 528
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 53/125 (42%), Gaps = 14/125 (11%)
Query: 84 SQLSHLDLLDHCKTCS--YMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------ 135
SQL HL TC YM + F+ C K + T+ E C C
Sbjct: 41 SQLGHLKSHIQTHTCEKPYMC-EKCSKPFNQLCDL-KTHMRTHTGEKPYKCEECRRQFSQ 98
Query: 136 ----KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
K +RT + C C +G ++SHIRTHTGEKPY C +C+ + + L
Sbjct: 99 LGDLKKHVRTHTGEKPYRCEECSRQFSRLGHLKSHIRTHTGEKPYKCEECSRQFSERRDL 158
Query: 192 HYHLK 196
H++
Sbjct: 159 KRHMR 163
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 49/118 (41%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C Q LD L S+M + C C NL L KS
Sbjct: 370 CEECSRQFGRLDHLK-----SHMQTHTGEKPYR--CEECSRQF-CNLGSL-------KSH 414
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C +G + SH+RTHTGEKPY C +C+ + + L H++
Sbjct: 415 MRTHTGEKPYKCEKCSRQFSQLGALNSHMRTHTGEKPYKCEECSRQFGRLDHLKSHMQ 472
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++ C C ++G +++HIRTHTGEKPY C +C+ + + + L H++
Sbjct: 2 RYRCEECSRQFSHLGNLKAHIRTHTGEKPYRCEECSRQFSQLGHLKSHIQ 51
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 40/100 (40%), Gaps = 15/100 (15%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C Q LD L S+M + C C NL L KS
Sbjct: 454 CEECSRQFGRLDHLK-----SHMQTHTGEKPYR--CEECSRQF-CNLGSL-------KSH 498
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAC 178
+RT + C C +G + SH+RTHTGEKPY C
Sbjct: 499 MRTHTGEKPYKCEKCSRQFSQLGALNSHMRTHTGEKPYRC 538
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
S +RT + C C + ++SH++THTGEKPY C +C+ + ++ L H++
Sbjct: 441 SHMRTHTGEKPYKCEECSRQFGRLDHLKSHMQTHTGEKPYRCEECSRQFCNLGSLKSHMR 500
Score = 39.3 bits (90), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
KS +RT + C C + +++HI THTGEKPY C +C+ + + ++ L H+
Sbjct: 244 KSHMRTHTGEKPYRCEECSRQFSQLSALKTHILTHTGEKPYKCEECSRQFSLLSILKIHM 303
Query: 196 K 196
+
Sbjct: 304 R 304
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C + +++H RTHTGEKPY C +C+ + + L H++
Sbjct: 331 MRTHTGEKPYRCEECSKQFSQLSDLKTHARTHTGEKPYKCEECSRQFGRLDHLKSHMQ 388
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
K+ IRT + C C +G ++SHI+THT EKPY C +C+
Sbjct: 19 KAHIRTHTGEKPYRCEECSRQFSQLGHLKSHIQTHTCEKPYMCEKCS 65
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 55/133 (41%), Gaps = 17/133 (12%)
Query: 79 CKHCHSQLSHL-DLLDHCKTCSYMIRP----NANNTFSPFCIYCKAVLSTNLNELIEHCR 133
C+ C Q S L DL H +T +P + FS + K+ + T+ E C
Sbjct: 89 CEECRRQFSQLGDLKKHVRT-HTGEKPYRCEECSRQFSRL-GHLKSHIRTHTGEKPYKCE 146
Query: 134 TC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
C K +RT F C C +G ++ H RTHT EKPY C +C+
Sbjct: 147 ECSRQFSERRDLKRHMRTHTGEKPFKCEECSKQFSLLGNLKKHTRTHTREKPYRCEECSR 206
Query: 184 RSASVAGLHYHLK 196
+ + + H++
Sbjct: 207 EFSRLDTMKKHMR 219
>gi|260823010|ref|XP_002603976.1| hypothetical protein BRAFLDRAFT_71736 [Branchiostoma floridae]
gi|229289301|gb|EEN59987.1| hypothetical protein BRAFLDRAFT_71736 [Branchiostoma floridae]
Length = 850
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C Y A ST N L +H P++ C C Y + N + H+R H GE
Sbjct: 670 CDYSAAWKSTLDNHLAKH-------TGDKPYK----CDQCHYSAANKSYLDRHLRIHVGE 718
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
KPY CG+C +R+A + L H+K
Sbjct: 719 KPYMCGECGYRTAQRSTLSRHMK 741
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+R HTGEKPY CG+C R+A + L H++
Sbjct: 544 MRTHTGDKPYKCDQCDYSAAQKPHLDRHLRKHTGEKPYMCGECGHRTAEKSDLSRHMR 601
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + H+R HTGEKPY CG C +R+A + L H++
Sbjct: 198 YKCDQCDYSVARKSHLDRHLRKHTGEKPYMCGDCGYRTAKKSHLSRHMR 246
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + H+RTHTG+KPY C QC + +A L HL+K
Sbjct: 525 FMCGECGYRATQKSDLSKHMRTHTGDKPYKCDQCDYSAAQKPHLDRHLRK 574
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A + L HL K
Sbjct: 637 YICGECGYRASRKSHLSVHMRTHTGEKPYKCDQCDYSAAWKSTLDNHLAK 686
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTG+KPY C QC F +A L HL K
Sbjct: 226 YMCGDCGYRTAKKSHLSRHMRTHTGDKPYKCDQCDFSAAQKVHLDSHLAK 275
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C+Y + N + H++ HTGEKPY C QC + +A + L H+
Sbjct: 777 YICGECEYKTTNKSHLSRHMKIHTGEKPYMCDQCDYSAAHKSNLDRHI 824
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C + + + H+RTHTGEKPY CG+C R+ + L H++
Sbjct: 282 YICEECGHRAAQKSNLLIHMRTHTGEKPYMCGECGHRAVQKSHLMVHMR 330
Score = 44.7 bits (104), Expect = 0.024, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT ++C C + + + H+RTHTGEKPY C QC + +A + + H K
Sbjct: 301 MRTHTGEKPYMCGECGHRAVQKSHLMVHMRTHTGEKPYKCDQCDYSAAQKSTFNRHFGK 359
Score = 43.5 bits (101), Expect = 0.042, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + +H+ HTG+KPY C QC + +A+ + L HL+
Sbjct: 656 MRTHTGEKPYKCDQCDYSAAWKSTLDNHLAKHTGDKPYKCDQCHYSAANKSYLDRHLR 713
Score = 43.5 bits (101), Expect = 0.049, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT C C+Y + + H+ HTGEKPY CG+C +R++ + L H++
Sbjct: 600 MRTHTGEKPHKCDQCNYSAAQKCDLDKHLAKHTGEKPYICGECGYRASRKSHLSVHMR 657
Score = 43.1 bits (100), Expect = 0.058, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HTGEKP+ C QC + +A + L H+ K
Sbjct: 467 YICGECGYRTARKSDLSQHMRIHTGEKPHKCDQCEYSAARKSHLKRHVAK 516
Score = 43.1 bits (100), Expect = 0.063, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H+RTHTGEKP+ C QC + +A L HL K
Sbjct: 581 YMCGECGHRTAEKSDLSRHMRTHTGEKPHKCDQCNYSAAQKCDLDKHLAK 630
Score = 43.1 bits (100), Expect = 0.070, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CD+ + + SH+ HTGEKPY C +C R+A + L H++
Sbjct: 245 MRTHTGDKPYKCDQCDFSAAQKVHLDSHLAKHTGEKPYICEECGHRAAQKSNLLIHMR 302
Score = 43.1 bits (100), Expect = 0.070, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G M H+ HTGEKPY CG+C +R+A + L H++
Sbjct: 452 GNMGRHVVKHTGEKPYICGECGYRTARKSDLSQHMR 487
Score = 42.7 bits (99), Expect = 0.078, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + H+RTHTGEKPY C QC + +A + L H
Sbjct: 84 YMCGECGYRVAQKSDLTRHMRTHTGEKPYKCDQCDYSAARKSTLDNH 130
Score = 40.8 bits (94), Expect = 0.34, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H H+G+KPY CG+C +++ + + L H+K
Sbjct: 749 YKCDLCDYSAAQKINLVQHTTKHSGQKPYICGECEYKTTNKSHLSRHMK 797
Score = 39.7 bits (91), Expect = 0.63, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 148 FVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHY 193
++C CDY + + + HI HTG+KPY CG+C FR GL+Y
Sbjct: 805 YMCDQCDYSAAHKSNLDRHIAAKHTGDKPYMCGECGFR----IGLNY 847
Score = 39.7 bits (91), Expect = 0.70, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 126 NELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHT--GEKPYACGQCAF 183
++L +H R I T HK C C+Y + ++ H+ HT GEKP+ CG+C +
Sbjct: 480 SDLSQHMR-----IHTGEKPHK--CDQCEYSAARKSHLKRHVAKHTATGEKPFMCGECGY 532
Query: 184 RSASVAGLHYHLK 196
R+ + L H++
Sbjct: 533 RATQKSDLSKHMR 545
Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 135 CKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHY 193
C+ M RT + + C CDY + + +HI HT E+PY C QC + A + L
Sbjct: 157 CRHM-RTHTGENPYKCDQCDYSAAVKCNLDNHIAAKHTDEQPYKCDQCDYSVARKSHLDR 215
Query: 194 HLKK 197
HL+K
Sbjct: 216 HLRK 219
Score = 37.0 bits (84), Expect = 4.0, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
M H+ +TG+KPY CG+C +R A + L H++
Sbjct: 71 MGRHVVKYTGDKPYMCGECGYRVAQKSDLTRHMR 104
>gi|260835926|ref|XP_002612958.1| hypothetical protein BRAFLDRAFT_114219 [Branchiostoma floridae]
gi|229298340|gb|EEN68967.1| hypothetical protein BRAFLDRAFT_114219 [Branchiostoma floridae]
Length = 509
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F C C Y + + H+RTHTGEKPY CG+C +R+A ++ L H+
Sbjct: 306 FKCDQCGYSAAVKSTLVKHLRTHTGEKPYMCGECGYRAAQMSSLSKHM 353
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 18/110 (16%)
Query: 91 LLDHCKTCSYMIRPNANNTFS----PFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH 146
+ +H + + N F+ P+ Y K+ LS ++ RT
Sbjct: 381 IANHTRDTGWQQNEQDNKPFACKECPYSTYLKSDLSRHM--------------RTHTGEK 426
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C Y + + H+RTHTGEKPY CG+C +R+A ++ L H++
Sbjct: 427 PYKCDQCAYSAAVKSSLVKHLRTHTGEKPYMCGECGYRTAQMSCLSKHMR 476
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 11/81 (13%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C Y AV S+ L++H +RT ++C C Y + + C+ H+RTHTG+
Sbjct: 433 CAYSAAVKSS----LVKH-------LRTHTGEKPYMCGECGYRTAQMSCLSKHMRTHTGD 481
Query: 174 KPYACGQCAFRSASVAGLHYH 194
KPY C QC++ + + L H
Sbjct: 482 KPYRCDQCSYSATRKSYLDKH 502
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ H G KPYACG+C +R+A A L H++
Sbjct: 19 MRTHTGERPYKCDQCDYSAGRKSTLDRHLANHAGVKPYACGECGYRTAKKAHLSQHMR 76
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C+Y + + G + SH+ THTGEKPY C +C + +A + L HL K
Sbjct: 194 YMCGKCEYRTSHRGHLISHMNTHTGEKPYKCDRCDYSAARKSQLDIHLAK 243
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 15/78 (19%)
Query: 112 PF----CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHI 167
PF C Y AV ST L++H +RT ++C C Y + + + H+
Sbjct: 305 PFKCDQCGYSAAVKST----LVKH-------LRTHTGEKPYMCGECGYRAAQMSSLSKHM 353
Query: 168 RTHTGEKPYACGQCAFRS 185
THTG+KPY C QC+F S
Sbjct: 354 TTHTGDKPYKCDQCSFSS 371
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+++C C + + + C+ HIRTHTGEKP+ C QC + +A L H+ K
Sbjct: 249 RYMCEICGHRTADKICLTLHIRTHTGEKPHKCDQCDYSAAQKCSLRKHIAK 299
Score = 42.7 bits (99), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IRT C CDY + +R HI HTG+KP+ C QC + +A + L HL+
Sbjct: 269 IRTHTGEKPHKCDQCDYSAAQKCSLRKHIAKHTGQKPFKCDQCGYSAAVKSTLVKHLR 326
Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+C C Y + + H+RTHTGE+PY C QC + + + L HL
Sbjct: 1 MCGECGYQTVRKDHILRHMRTHTGERPYKCDQCDYSAGRKSTLDRHL 47
Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
+ C C Y + + H+R+HTGEKPY C C +
Sbjct: 56 YACGECGYRTAKKAHLSQHMRSHTGEKPYRCDHCDY 91
>gi|260787847|ref|XP_002588963.1| hypothetical protein BRAFLDRAFT_125436 [Branchiostoma floridae]
gi|229274135|gb|EEN44974.1| hypothetical protein BRAFLDRAFT_125436 [Branchiostoma floridae]
Length = 928
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY CGQC + +A + L+ HL K
Sbjct: 727 YMCEECGYRTAKKFHLDEHMRTHTGEKPYKCGQCDYSAAKKSTLNRHLAK 776
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + + HIRTHTGEKPY C QCAF +A + L H
Sbjct: 671 YMCEKCGYRTSRKNDLSQHIRTHTGEKPYKCDQCAFSAAQKSTLKQH 717
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 13/101 (12%)
Query: 99 SYMIRPNANNTFSPF-CIYC--KAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDY 155
S + +P A+ P+ C C K +NL++ +RT + C CDY
Sbjct: 433 SLVSQPEAHPGEKPYMCGECGYKTAYHSNLSK----------HMRTHTGEKPYKCDQCDY 482
Query: 156 FSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ + H+ HTG+KPY CG+C +R+A + L H++
Sbjct: 483 SASRKYSLDQHLAKHTGDKPYMCGECGYRTAHKSDLSRHMR 523
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + ++ + L HL K
Sbjct: 615 YICRECGYRTSQKSDLSRHMRTHTGEKPYKCDQCDYSASRKSSLDQHLAK 664
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ H G+KPY CG+C +R+A + L+ H++
Sbjct: 746 MRTHTGEKPYKCGQCDYSAAKKSTLNRHLAKHGGDKPYMCGECGYRTAQKSTLYRHME 803
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 13/73 (17%)
Query: 126 NELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNI---GCMRSHIRTHTGEKPYACGQCA 182
++L H RT R PF+ CD F Y+ + SH+ HTGEKPY CG+C
Sbjct: 516 SDLSRHMRT---HTREKPFK-------CDQFDYSAVQKSILDSHLAKHTGEKPYMCGECG 565
Query: 183 FRSASVAGLHYHL 195
+++A + L HL
Sbjct: 566 YKTAKKSHLSEHL 578
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A L HL K
Sbjct: 108 YMCGECGYRATQKWHLSQHMRTHTGEKPYKCDQCDYSAARKCSLDRHLTK 157
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + H+ HTG+KPY CG+C +R+ L H++
Sbjct: 239 MRTHTGDKPYKCDQCDYSAADKSTLNRHLARHTGDKPYMCGECGYRATQKWNLSNHMR 296
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CDY + + H+ HTG+KPY CGQC +R+A + H++
Sbjct: 192 FKCDQCDYSAAQKCNLDQHLAKHTGDKPYMCGQCGYRTAHKYAISIHMR 240
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 30/61 (49%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
S P ++C C Y + + H+RTHTGEKPY C QC + ++ L HL
Sbjct: 436 SQPEAHPGEKPYMCGECGYKTAYHSNLSKHMRTHTGEKPYKCDQCDYSASRKYSLDQHLA 495
Query: 197 K 197
K
Sbjct: 496 K 496
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KPY CG+C +R+A L H++
Sbjct: 127 MRTHTGEKPYKCDQCDYSAARKCSLDRHLTKHTGDKPYMCGECGYRTARKCHLSEHMR 184
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 9/101 (8%)
Query: 97 TCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDY 155
T S +P A P+ C C + ++L H +RT + C CDY
Sbjct: 36 TASKPSQPEAQTDEKPYMCAEC-GYRAARKSDLSIH-------MRTHTGEKPYKCDQCDY 87
Query: 156 FSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ + + H HTG+KPY CG+C +R+ L H++
Sbjct: 88 SAADKSTLNRHRVIHTGDKPYMCGECGYRATQKWHLSQHMR 128
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 17/100 (17%)
Query: 114 CIYCKAVLSTNLNELIEH-------CRTC--KSMIRTDPFRH--------KFVCYACDYF 156
C Y A S+ + L +H CR C ++ ++D RH + C CDY
Sbjct: 592 CDYSAARKSSLDHHLAKHTGDKPYICRECGYRTSQKSDLSRHMRTHTGEKPYKCDQCDYS 651
Query: 157 SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ + H+ HTGEKPY C +C +R++ L H++
Sbjct: 652 ASRKSSLDQHLAKHTGEKPYMCEKCGYRTSRKNDLSQHIR 691
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + +H+RTHTGEKPY C QC + S L HL
Sbjct: 276 YMCGECGYRATQKWNLSNHMRTHTGEKPYKCDQCDYSSTQKCNLDKHL 323
Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ CY CDY + + H+ H+G+KPY C +C +R+ + L H++
Sbjct: 811 YKCYQCDYSAAQKSTLNQHVANHSGDKPYMCEECGYRTTWKSTLSRHMR 859
Score = 43.1 bits (100), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+RTHTG+KPY C QC + +A + L+ HL +
Sbjct: 220 YMCGQCGYRTAHKYAISIHMRTHTGDKPYKCDQCDYSAADKSTLNRHLAR 269
Score = 43.1 bits (100), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY S + H+ HTG+KPY CG+C + A + L H++
Sbjct: 295 MRTHTGEKPYKCDQCDYSSTQKCNLDKHLAIHTGDKPYMCGECGYSVAQKSTLSQHMR 352
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTG+KPY C +C +R++ + L H++
Sbjct: 587 YKCDQCDYSAARKSSLDHHLAKHTGDKPYICRECGYRTSQKSDLSRHMR 635
Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HTG+KP+ C QC + +A L HL K
Sbjct: 164 YMCGECGYRTARKCHLSEHMRIHTGQKPFKCDQCDYSAAQKCNLDQHLAK 213
Score = 39.7 bits (91), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+ TH EKPY C QC + +A + L +HL K
Sbjct: 559 YMCGECGYKTAKKSHLSEHLITHIAEKPYKCDQCDYSAARKSSLDHHLAK 608
Score = 36.2 bits (82), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 10/87 (11%)
Query: 120 VLSTNLNELIEHCRTCKSMIR---TDPFR-------HKFVCYACDYFSYNIGCMRSHIRT 169
+++ N ++ E C + + +D +R HK A D+ + + + S
Sbjct: 381 IITGNRLDMAEACNGSPTAVPQNFSDGYRYPPGVLCHKDATKAKDHPTASKTSLVSQPEA 440
Query: 170 HTGEKPYACGQCAFRSASVAGLHYHLK 196
H GEKPY CG+C +++A + L H++
Sbjct: 441 HPGEKPYMCGECGYKTAYHSNLSKHMR 467
>gi|260784640|ref|XP_002587373.1| hypothetical protein BRAFLDRAFT_60894 [Branchiostoma floridae]
gi|229272518|gb|EEN43384.1| hypothetical protein BRAFLDRAFT_60894 [Branchiostoma floridae]
Length = 586
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 58/144 (40%), Gaps = 29/144 (20%)
Query: 74 QNHSLCKHCHSQLSHLDLLD------------HCKTCSYMIRP--------NANNTFSPF 113
Q H+ C+ C Q S L L C+ CS + P+
Sbjct: 387 QTHTGCEECRKQFSELGALKTHMQTHTGAKPYKCEKCSRQFSQLCNLQTHMRTHTGEKPY 446
Query: 114 -CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTG 172
C+ C S LN L H RT P+R C C ++G +R HI THTG
Sbjct: 447 KCVECNRQFS-QLNSLKRHMRT---HTGERPYR----CEECSRQFSDLGDLRKHIHTHTG 498
Query: 173 EKPYACGQCAFRSASVAGLHYHLK 196
EKPY C +C+ + + + L H++
Sbjct: 499 EKPYRCEECSKQFSQLIDLKRHMR 522
Score = 42.4 bits (98), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 56/152 (36%), Gaps = 40/152 (26%)
Query: 79 CKHCHSQLSHLDLLD------------HCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNL 125
C+ C Q S LD L C+ CS R P+ C C S +L
Sbjct: 68 CEECSKQFSRLDELKLHMQTHTGEKPHRCEECSRQFRCEK-----PYKCEECSKQFS-DL 121
Query: 126 NELIEH-----------CRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMR 164
L H C C K+ +RT + C C ++
Sbjct: 122 GNLKRHMQTHTGDKPYRCEECSKQFSQLGHLKTHMRTHTGEKSYKCKECSKQFSRPDVLK 181
Query: 165 SHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
H+RTHTGEKPY C +C+ + + + L H++
Sbjct: 182 RHMRTHTGEKPYKCERCSRQFSDMGNLKRHMR 213
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C C + + H+RTHTGEKPY C +C+ + + ++ L H++
Sbjct: 246 MRTHTGEKPFRCEECSRQFSELSNLERHMRTHTGEKPYRCEECSRQFSELSNLKKHMR 303
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C +G + SH+RTHTGEKPY C +C+ + + + L H++
Sbjct: 38 YRCEECSRQFSQLGNLDSHMRTHTGEKPYKCEECSKQFSRLDELKLHMQ 86
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C +G ++ H++THTGEKPY C +C+ + + + L H++
Sbjct: 10 YKCEECSKQFSELGNLKRHMQTHTGEKPYRCEECSRQFSQLGNLDSHMR 58
Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C ++SH+RTHTGEKP+ C +C+ + + ++ L H+
Sbjct: 327 KTHMRTHTGEKPYKCEECSQQFSRPDVLKSHMRTHTGEKPHRCEECSRQFSEMSTLKKHI 386
Query: 196 K 196
+
Sbjct: 387 Q 387
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 122 STNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
S ++LI+ R ++ R P+R C C + H+RTHT EKPY+C +C
Sbjct: 508 SKQFSQLIDLKRHMRTHTREKPYR----CEECSKQFSQQSNLNRHMRTHTVEKPYSCEEC 563
Query: 182 AFRSASVAGLHYHLK 196
+ + + ++ L H++
Sbjct: 564 SKQFSRLSNLKTHMR 578
>gi|260822473|ref|XP_002606626.1| hypothetical protein BRAFLDRAFT_57914 [Branchiostoma floridae]
gi|229291970|gb|EEN62636.1| hypothetical protein BRAFLDRAFT_57914 [Branchiostoma floridae]
Length = 441
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 17/119 (14%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKS 137
C+ C Q SHL L +R + P+ C C S L+ L H RT
Sbjct: 110 CEECSKQFSHLQSLK------KHVRTHTGE--KPYKCDECSKQFS-QLSRLKSHMRT--- 157
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R P++ C C +G ++SH+RTHTGEKPY C +C+ + + + L H++
Sbjct: 158 HTREKPYK----CEQCSKHFSALGDLKSHMRTHTGEKPYKCEECSKQFSHLHNLKNHMR 212
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 79 CKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPFCI--YCKAVLSTNLNELIEHCRTC 135
C+ C Q SHL +L +H +T + R F + K + T+ E C C
Sbjct: 194 CEECSKQFSHLHNLKNHMRTHTGEKRYKCEKCSKQFSQQQHLKTHMHTHTGEKPYKCEEC 253
Query: 136 ----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
K +RT F C C +G +++H+RTHTG+KPY C +C R
Sbjct: 254 SKQFNHLSNLKHHVRTHTGEKPFRCEECRKQFSQLGHLKTHMRTHTGQKPYKCEECLKRF 313
Query: 186 ASVAGLHYHLK 196
+ +A L H++
Sbjct: 314 SQLAHLKTHMR 324
Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 57/140 (40%), Gaps = 31/140 (22%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEH------ 131
C+ C Q +HL L H +R + PF C C+ S L L H
Sbjct: 250 CEECSKQFNHLSNLKH------HVRTHTGE--KPFRCEECRKQFS-QLGHLKTHMRTHTG 300
Query: 132 -----CRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY 176
C C K+ +RT C C +G +++H+RTHTG+KPY
Sbjct: 301 QKPYKCEECLKRFSQLAHLKTHMRTHTGEKPNRCEECSGQFSELGALKTHMRTHTGQKPY 360
Query: 177 ACGQCAFRSASVAGLHYHLK 196
C +C + + +A L H++
Sbjct: 361 RCEECLRQVSQLAHLKTHMR 380
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT C C +G ++ H+RTHTGEKPY C C+ + +S++ + H
Sbjct: 376 KTHMRTHTGEKPSRCEECSGQFSELGALKRHMRTHTGEKPYRCEVCSKKFSSLSNMKSHQ 435
Query: 196 K 196
+
Sbjct: 436 R 436
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C ++ ++ H+RTHTGEKPY C +C+ + + ++ L H++
Sbjct: 108 YKCEECSKQFSHLQSLKKHVRTHTGEKPYKCDECSKQFSQLSRLKSHMR 156
Score = 39.3 bits (90), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Query: 118 KAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHI 167
K + T+ E C C K+ +RT + + C C + +++H+
Sbjct: 320 KTHMRTHTGEKPNRCEECSGQFSELGALKTHMRTHTGQKPYRCEECLRQVSQLAHLKTHM 379
Query: 168 RTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RTHTGEKP C +C+ + + + L H++
Sbjct: 380 RTHTGEKPSRCEECSGQFSELGALKRHMR 408
Score = 36.2 bits (82), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C C+ + +++H+ +HTGEKPY C +C+ + + ++ L H+
Sbjct: 52 YKCEECNRQFSQLSRLKTHMHSHTGEKPYKCEECSKQFSQLSRLKTHM 99
>gi|260787236|ref|XP_002588660.1| hypothetical protein BRAFLDRAFT_240758 [Branchiostoma floridae]
gi|229273827|gb|EEN44671.1| hypothetical protein BRAFLDRAFT_240758 [Branchiostoma floridae]
Length = 545
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY CG+C +R+A + L H++
Sbjct: 193 MRTHTGEKPYKCDQCDYSAAQKSNLDQHLSKHTGEKPYMCGECGYRTAHKSALSRHMR 250
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
+RT + + C CDY + + + SH HTGEKPY CG+C +R+A
Sbjct: 137 MRTHTRQKTYKCDQCDYSTADKSALASHQTKHTGEKPYMCGECGYRAA 184
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 22/108 (20%)
Query: 110 FSPF----CIYCKA--------VLSTNLNELIEHCRTC--KSMIRTDPFRHK-------- 147
F P+ C YC A V++ + E C C K+ R+ HK
Sbjct: 397 FKPYKCDQCDYCAARQDELDRHVVTKHTTEKPYMCEECGHKTAFRSALILHKRKHTGEKP 456
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C Y + + + HIR HTGEKPY C QC + +A+ L H+
Sbjct: 457 FMCEDCGYRTADRSHLSRHIRIHTGEKPYKCDQCDYSAANKDHLDEHV 504
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A + L HL K
Sbjct: 174 YMCGECGYRAARKFHLILHMRTHTGEKPYKCDQCDYSAAQKSNLDQHLSK 223
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 121 LSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ 180
++ + + L +H RT R P++ C CDY + H++ HTGEK Y CG+
Sbjct: 70 MTVHKSNLTQHMRT---RARQIPYK----CDQCDYSVRRESHLVQHLKKHTGEKHYMCGE 122
Query: 181 CAFRSASVAGLHYHLK 196
C R+A + L H++
Sbjct: 123 CGHRTAYKSSLSQHMR 138
Score = 39.7 bits (91), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
R P++ C CD+ G + HIR H KPY CG+C +R+A + + H +
Sbjct: 287 TREKPYK----CDQCDFSDSRKGDLNRHIRAKHPDRKPYQCGECGYRAAKKSNISRHER 341
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIR-THTGEKPYACGQCAFRSASVAGLHYH 194
KS I H + C CDY + + H+ HTGEKPY C C +R+A+ + L H
Sbjct: 333 KSNISRHERTHTYKCDECDYSAALKDQLDQHVMMKHTGEKPYMCENCDYRTANKSHLALH 392
Query: 195 LKK 197
++K
Sbjct: 393 VRK 395
Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + H+ THT EKPY C QC F + L+ H++
Sbjct: 264 YMCDKCGYRTAKKCHFSKHMTTHTREKPYKCDQCDFSDSRKGDLNRHIR 312
Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + + H+RTHT EKPY QC + +A ++ H K
Sbjct: 6 FMCGECGYSTAHGPSLYLHMRTHTAEKPYKSDQCDYSAAQKLNMNQHQAK 55
>gi|443696351|gb|ELT97070.1| hypothetical protein CAPTEDRAFT_181403 [Capitella teleta]
Length = 145
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + +R H+RTHTGEKPY C C + +A + L HL++
Sbjct: 81 YKCDKCDYATVERSHLRVHMRTHTGEKPYKCEYCDYATAQNSTLKIHLRR 130
>gi|260798676|ref|XP_002594326.1| hypothetical protein BRAFLDRAFT_65180 [Branchiostoma floridae]
gi|229279559|gb|EEN50337.1| hypothetical protein BRAFLDRAFT_65180 [Branchiostoma floridae]
Length = 1209
Score = 49.3 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
C C F Y + H RTHTGE+P+AC +C + SA+ GL H++ ++
Sbjct: 737 CRYCGRFFYYDKTLAQHERTHTGERPFACNECPYASATKEGLKRHIQGSH 786
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 145 RHKFVCYACDY----FSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
R ++C++ F + G + +H+R HT EKP+ C +C + A L H++K
Sbjct: 333 RSSLTVFSCEFCSKVFKFRNG-LVNHLRVHTKEKPFKCDRCDYACAVKTNLKTHMRK 388
Score = 37.7 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 25/121 (20%)
Query: 100 YMIRPNANNTFSPFCIYCKAVLSTNLNELIEH-----------CRTC------KSMIRTD 142
Y+ ++ FS C +C V N L+ H C C K+ ++T
Sbjct: 329 YLFSRSSLTVFS--CEFCSKVFKFR-NGLVNHLRVHTKEKPFKCDRCDYACAVKTNLKTH 385
Query: 143 PFRH---KFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLKKT 198
+H +F C CDY S N G ++ HI T H GE+ + C C+ +V L H ++
Sbjct: 386 MRKHTGERFHCQQCDYSSINKGHLKDHIATKHKGER-HPCEMCSSTYTTVRALVKHFREK 444
Query: 199 Y 199
+
Sbjct: 445 H 445
Score = 37.4 bits (85), Expect = 3.3, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 23/53 (43%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
++ C CDY I +R H+ H+G+K C C + + H K +
Sbjct: 963 RYYCQICDYSGIQIAHLRRHMEQHSGQKVLKCPLCPYSCNITGAMKRHFNKKH 1015
>gi|410916539|ref|XP_003971744.1| PREDICTED: zinc finger protein 513-like [Takifugu rubripes]
Length = 627
Score = 49.3 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
KS+ D + C+ C + S ++ H++TH GEKPY C C + SA + L HL
Sbjct: 178 KSLTAEDKLAKQHSCHLCGFSSRYANHVKRHMKTHNGEKPYHCPLCTYASAQLVNLQRHL 237
Query: 196 K 196
+
Sbjct: 238 R 238
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 30/59 (50%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
K ++T + C C Y S + ++ H+R HTGEKPY C C F +S+ L H
Sbjct: 206 KRHMKTHNGEKPYHCPLCTYASAQLVNLQRHLRIHTGEKPYKCDSCTFACSSLGNLKRH 264
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 12/103 (11%)
Query: 104 PNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK-SMIRTDPFRHK----------FVCY 151
P ++ PF C C VL + C C M+ D + C
Sbjct: 379 PTLPSSLFPFTCRLCGVVLEDEDGTSAQICAKCTLEMLTKDTSSSPNSPGERSDKVYTCA 438
Query: 152 ACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
AC + ++ + H++TH+GEKPY C QC + SA L H
Sbjct: 439 ACPFLTHYPNHLARHMKTHSGEKPYKCPQCDYASAHFDNLKRH 481
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++T + C CDY S + ++ H R HTGEKPY C C + ++A L H
Sbjct: 454 MKTHSGEKPYKCPQCDYASAHFDNLKRHHRVHTGEKPYKCHLCDYACGNLANLKRH 509
Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C+ CDY N+ ++ H R H+G KP+ C C++ L H+
Sbjct: 491 YKCHLCDYACGNLANLKRHQRVHSGAKPFQCAVCSYSCNQSMNLKRHM 538
Score = 39.3 bits (90), Expect = 0.83, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 23/50 (46%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C Y ++ H+ HTGEKPY C +C + + H KK
Sbjct: 519 FQCAVCSYSCNQSMNLKRHMLRHTGEKPYKCRECGYTTGHWDNYKRHQKK 568
>gi|260811187|ref|XP_002600304.1| hypothetical protein BRAFLDRAFT_118283 [Branchiostoma floridae]
gi|229285590|gb|EEN56316.1| hypothetical protein BRAFLDRAFT_118283 [Branchiostoma floridae]
Length = 634
Score = 49.3 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A L YH++K
Sbjct: 202 YMCGECGYRTEYRYSLTQHMRTHTGEKPYKCDQCDYSAALKGSLIYHMRK 251
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C CDY + G + H+R HTGEKPY C QC + + L H+ K
Sbjct: 463 FKCDQCDYSAALKGSLDHHMRKHTGEKPYKCDQCDYSTVRKGDLDIHMAK 512
Score = 47.0 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + G + H+ HTGEKPY CG+C +R+ L H+++
Sbjct: 491 YKCDQCDYSTVRKGDLDIHMAKHTGEKPYMCGECGYRTEYKNCLTLHMRR 540
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 37/84 (44%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C Y ++ + + +H K D F C C Y + H+RTHTGE
Sbjct: 83 CDYSAVQKASLDHHMRKHTGQIKGQSAQDAFNKSHSCDQCGYRVGYKSQLIRHMRTHTGE 142
Query: 174 KPYACGQCAFRSASVAGLHYHLKK 197
KPY C QC + +A L +H +K
Sbjct: 143 KPYKCDQCDYSAALKGSLDHHKRK 166
Score = 43.9 bits (102), Expect = 0.041, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 28/57 (49%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + C CDY + G + H R HTGEKP+ C QC + + L H+
Sbjct: 136 MRTHTGEKPYKCDQCDYSAALKGSLDHHKRKHTGEKPFKCDQCDYSAVRKGDLDIHI 192
Score = 43.5 bits (101), Expect = 0.046, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + C+ H+R HTG+KPY C QC + +A L H+ +
Sbjct: 519 YMCGECGYRTEYKNCLTLHMRRHTGKKPYKCDQCDYSAAQKIVLTRHMAQ 568
Score = 42.4 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 148 FVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CDY + G + HI H GEKPY CG+C +R+ L H++
Sbjct: 173 FKCDQCDYSAVRKGDLDIHIMAKHIGEKPYMCGECGYRTEYRYSLTQHMR 222
Score = 42.4 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C C Y + + H+R HTGEKP+ C QC + +A L +H++K
Sbjct: 437 CDQCGYRTPYKSQLIRHMRKHTGEKPFKCDQCDYSAALKGSLDHHMRK 484
Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+R + + C CDY + + H+ HT EKPY CG+C + + + L H+KK
Sbjct: 538 MRRHTGKKPYKCDQCDYSAAQKIVLTRHMAQHTDEKPYKCGECDYGTGNKFHLAIHMKK 596
Score = 40.0 bits (92), Expect = 0.57, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 27/51 (52%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+F+C C Y + N + H++ HTG KP+ C QC + +A H+ K
Sbjct: 285 QFMCGRCGYKTDNRFHLSEHMKKHTGWKPFKCNQCDYSAAQKWAFDCHMAK 335
Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
+ C CDY + N + H++ HT EKPY C QC F +A
Sbjct: 575 YKCGECDYGTGNKFHLAIHMKKHTVEKPYKCDQCDFSAA 613
Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
F C CDY + H+ H GEK Y CG+C +R+
Sbjct: 314 FKCNQCDYSAAQKWAFDCHMAKHKGEKSYMCGECGYRT 351
Score = 35.8 bits (81), Expect = 9.1, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEK----PYACGQCAFRSASVAGLHYHLKK 197
C C Y + + SH+R HTGEK + CG+C +R A + L H+++
Sbjct: 20 CDHCGYRAAYKSKLTSHMRKHTGEKHGEKDFMCGECGYRVAYKSHLIRHMRR 71
>gi|260832590|ref|XP_002611240.1| hypothetical protein BRAFLDRAFT_207353 [Branchiostoma floridae]
gi|229296611|gb|EEN67250.1| hypothetical protein BRAFLDRAFT_207353 [Branchiostoma floridae]
Length = 525
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + G + H+ HTGEKPY CG+C FR+ + L H+++
Sbjct: 209 YKCDQCDYSASRKGYLDKHMYRHTGEKPYMCGECGFRTPDRSSLTRHMRR 258
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + G + H+ HTGEKPY CG+C F++ + L H+++
Sbjct: 408 YKCDQCDYSASRKGSLDKHMHRHTGEKPYICGECGFKTPDRSSLTRHMRR 457
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 38/84 (45%), Gaps = 11/84 (13%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C Y A ST + +H T RH +C C Y + + H+R HTGE
Sbjct: 301 CDYAAASRSTLDRHMAKH---------TGEKRH--LCSECGYRTAQRCRLIQHMRKHTGE 349
Query: 174 KPYACGQCAFRSASVAGLHYHLKK 197
KPY C QC F SA LH HL K
Sbjct: 350 KPYKCDQCDFSSAHKVSLHLHLSK 373
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CD+ S + + H+ H GEKP+ CGQC +R+AS + L H+++
Sbjct: 352 YKCDQCDFSSAHKVSLHLHLSKHAGEKPFMCGQCEYRTASRSHLSVHMRR 401
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C CD+ S + H+ H GEKP+ CGQC +R+A + L H+++
Sbjct: 153 FKCDQCDFSSAYKVSLDLHLSKHAGEKPFLCGQCGYRTARRSHLSEHMRR 202
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C+Y + + + H+R H+GEKPY C QC + ++ L H+
Sbjct: 380 FMCGQCEYRTASRSHLSVHMRRHSGEKPYKCDQCDYSASRKGSLDKHM 427
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+F+C C++ + + + H RTHTGEKPY C QC + +A L H+
Sbjct: 11 RFLCTECEFRAASKSNLIKHTRTHTGEKPYKCDQCDYAAARKYTLDIHM 59
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 37/84 (44%), Gaps = 11/84 (13%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C Y A ST + +H T RH +C C Y + + H+R HTGE
Sbjct: 102 CDYAAASRSTLDRHMAKH---------TGEKRH--LCNECGYRTAQRCRLYQHMRKHTGE 150
Query: 174 KPYACGQCAFRSASVAGLHYHLKK 197
KP+ C QC F SA L HL K
Sbjct: 151 KPFKCDQCDFSSAYKVSLDLHLSK 174
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + SH+ HTGEKP+ CG+C +++ ++ L H++
Sbjct: 464 YKCDQCDYSAAQKFALDSHMAKHTGEKPFICGKCEYKTNVLSSLSIHMR 512
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
F+C C+Y + + + H+RTHTGEKPY C QC
Sbjct: 492 FICGKCEYKTNVLSSLSIHMRTHTGEKPYKCDQC 525
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAG 190
F+C C Y + + H+R H+GEKPY C QC + SAS G
Sbjct: 181 FLCGQCGYRTARRSHLSEHMRRHSGEKPYKCDQCDY-SASRKG 222
Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + + H+ HTGEK + C +C +R+A L+ H++K
Sbjct: 97 YKCEQCDYAAASRSTLDRHMAKHTGEKRHLCNECGYRTAQRCRLYQHMRK 146
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + + H+R HTG KPY C QC + +A L H+ K
Sbjct: 436 YICGECGFKTPDRSSLTRHMRRHTGVKPYKCDQCDYSAAQKFALDSHMAK 485
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + HIR HT KPY C QC + +AS + L H+ K
Sbjct: 69 YMCGKCGYRAAERSRLSVHIRNHTCGKPYKCEQCDYAAASRSTLDRHMAK 118
Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 113 FCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHI-RTHT 171
C C+ ++ N LI+H RT P++ C CDY + + H+ H+
Sbjct: 13 LCTECEFRAASKSN-LIKHTRT---HTGEKPYK----CDQCDYAAARKYTLDIHMAGKHS 64
Query: 172 GEKPYACGQCAFRSASVAGLHYHLK 196
G+ PY CG+C +R+A + L H++
Sbjct: 65 GDNPYMCGKCGYRAAERSRLSVHIR 89
>gi|260783429|ref|XP_002586777.1| hypothetical protein BRAFLDRAFT_243240 [Branchiostoma floridae]
gi|229271903|gb|EEN42788.1| hypothetical protein BRAFLDRAFT_243240 [Branchiostoma floridae]
Length = 534
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KPY CG+C +R+A A L H+K
Sbjct: 203 MRTHTGEKPYKCDQCDYSAAEQSTLDDHMTKHTGQKPYMCGECGYRTALRASLSRHMK 260
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CDY + + H+ H GEKPY CG+C +R+ + L H++
Sbjct: 371 MRTHTGEKPFKCDQCDYSATRKSTLHQHVEKHIGEKPYMCGECGYRTNQKSSLSNHMR 428
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + +H+RTHTGEKPY C QC + +A L HL K
Sbjct: 408 YMCGECGYRTNQKSSLSNHMRTHTGEKPYKCDQCDYSAAHKYSLDIHLAK 457
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + H+ HTGEKPY CG+C +R+A + L H++
Sbjct: 427 MRTHTGEKPYKCDQCDYSAAHKYSLDIHLAKHTGEKPYMCGECGYRTAHKSDLTKHVR 484
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 151 YACDYFSYNIGC---MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
Y CD Y C + H+RTHTGEKP+ C QC + + + LH H++K
Sbjct: 352 YMCDECGYRAACKSNLSRHMRTHTGEKPFKCDQCDYSATRKSTLHQHVEK 401
Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+RTHTGEKP C QC F +A + L HL++
Sbjct: 464 YMCGECGYRTAHKSDLTKHVRTHTGEKPNKCDQCDFSAARKSYLDDHLRE 513
Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDYF+ + H+ HTGEKPY C +C +R++ + L H++
Sbjct: 100 YKCDQCDYFAAQKCDLDRHLAKHTGEKPYMCEECGYRTSLKSDLSRHIR 148
Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + + L HL K
Sbjct: 44 YMCGECGYRTARKYTLYEHMRTHTGEKPYKCDQCDYSTGRKFSLEIHLAK 93
Score = 43.1 bits (100), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H+RTHTGEKPY C QC + +A + L H+ K
Sbjct: 184 YMCGECGFRTTRKSTLLRHMRTHTGEKPYKCDQCDYSAAEQSTLDDHMTK 233
Score = 42.7 bits (99), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 121 LSTNLNELIEHCRTC--KSMIRTDPFRH--------KFVCYACDYFSYNIGCMRSHIRTH 170
L+ + E C C ++ +++D RH + C CDY + + H+ H
Sbjct: 119 LAKHTGEKPYMCEECGYRTSLKSDLSRHIRIHTGEKPYKCDQCDYSAAQKFNLVRHLTKH 178
Query: 171 TGEKPYACGQCAFRSASVAGLHYHLK 196
TGEKPY CG+C FR+ + L H++
Sbjct: 179 TGEKPYMCGECGFRTTRKSTLLRHMR 204
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C CDY + + H+ HTGEKPY C QC + +A L HL K
Sbjct: 63 MRTHTGEKPYKCDQCDYSTGRKFSLEIHLAKHTGEKPYKCDQCDYFAAQKCDLDRHLAK 121
Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKPY C +C +R+A + L H++
Sbjct: 324 YKCDQCDYSAARKYHLDLHLARHTGEKPYMCDECGYRAACKSNLSRHMR 372
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + HIR HTGEKPY C QC + +A L HL K
Sbjct: 128 YMCEECGYRTSLKSDLSRHIRIHTGEKPYKCDQCDYSAAQKFNLVRHLTK 177
Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H++THTGEKPY C C + +A + L H+K+
Sbjct: 240 YMCGECGYRTALRASLSRHMKTHTGEKPYKCDLCDYSAARKSTLSAHVKR 289
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C CDY + H+ HTG+KPY C QC + +A L HL
Sbjct: 296 YKCDQCDYSTTQKSSFNIHLARHTGDKPYKCDQCDYSAARKYHLDLHL 343
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C CDY + + +H++ HTGEK Y C QC + + + + HL
Sbjct: 268 YKCDLCDYSAARKSTLSAHVKRHTGEKLYKCDQCDYSTTQKSSFNIHL 315
>gi|327285600|ref|XP_003227521.1| PREDICTED: zinc finger protein 214-like [Anolis carolinensis]
Length = 275
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 133 RTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLH 192
R +S +RT ++C C +IG +RSH +THTGEKPY C +C + LH
Sbjct: 119 RNLRSHLRTHTGEKPYICLDCGKSFTHIGSLRSHQKTHTGEKPYTCQECGKSFSESGSLH 178
Query: 193 YHLK 196
H +
Sbjct: 179 SHQR 182
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 28/61 (45%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+S +T + C C G + SH RTHTGEKPY C +C + LH H
Sbjct: 150 RSHQKTHTGEKPYTCQECGKSFSESGSLHSHQRTHTGEKPYTCQECGKSFSESGTLHTHQ 209
Query: 196 K 196
+
Sbjct: 210 R 210
Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
S RT + C C G + +H RTHTGEKPY C +C + + LH H +
Sbjct: 179 SHQRTHTGEKPYTCQECGKSFSESGTLHTHQRTHTGEKPYKCLECGKSFSQSSHLHRHHR 238
Score = 36.2 bits (82), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 26/60 (43%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
S RT + C C +RSH+RTHTGEKPY C C + L H K
Sbjct: 95 SHHRTHTGEKPYQCLECGRSFSEKRNLRSHLRTHTGEKPYICLDCGKSFTHIGSLRSHQK 154
>gi|260807253|ref|XP_002598423.1| hypothetical protein BRAFLDRAFT_83207 [Branchiostoma floridae]
gi|229283696|gb|EEN54435.1| hypothetical protein BRAFLDRAFT_83207 [Branchiostoma floridae]
Length = 752
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C+Y + + H++THTGEKPY CG+C +R+ + L H+K
Sbjct: 232 YMCGECEYRTVRKSDLSIHMKTHTGEKPYICGECGYRATRKSQLSEHIK 280
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C+Y + + H++THTGEKPY CG+C +R+ + L H+K
Sbjct: 345 YMCGECEYRTVRKSDLSIHMKTHTGEKPYICGECGYRATRKSQLSEHIK 393
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 13/88 (14%)
Query: 112 PF-CIYC--KAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIR 168
PF C C KA + L+E I K+ PF+ C C Y + + H++
Sbjct: 90 PFVCEECGYKAARKSQLSEHI------KTHTGEKPFK----CEECGYRAGRKFDLSIHMK 139
Query: 169 THTGEKPYACGQCAFRSASVAGLHYHLK 196
THTGEKPY CG+C +R+ + L H+K
Sbjct: 140 THTGEKPYICGECGYRATRKSQLSIHIK 167
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + HI+THTGEKPY C +C +R+ + + L H++
Sbjct: 260 YICGECGYRATRKSQLSEHIKTHTGEKPYKCEECGYRAVNKSHLSRHMR 308
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 113 FCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTG 172
C C +T ++L EH I+T F C C Y + N + H+RTHTG
Sbjct: 374 ICGEC-GYRATRKSQLSEH-------IKTHTGEKPFKCEECGYRAVNKSHLSRHMRTHTG 425
Query: 173 EKPYACGQCAFRSASVA 189
E+PY C QC + +A +
Sbjct: 426 ERPYKCDQCDYSAAQKS 442
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 113 FCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTG 172
C C +T ++L EH I+T + C C Y + N + H+RTHTG
Sbjct: 261 ICGEC-GYRATRKSQLSEH-------IKTHTGEKPYKCEECGYRAVNKSHLSRHMRTHTG 312
Query: 173 EKPYACGQCAFRSASVAGLHYH 194
E+PY C QC + +A + L H
Sbjct: 313 ERPYKCDQCDYSAAQKSCLDDH 334
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
I+T F C C Y + N + H+RTHTGE+PY C QC + +A + L H
Sbjct: 166 IKTHTGEKPFKCEECGYRAVNKSHLSRHMRTHTGERPYKCDQCDYSAAQKSCLDDH 221
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + HI+THTGEKP+ C +C +R+ + + L H++
Sbjct: 373 YICGECGYRATRKSQLSEHIKTHTGEKPFKCEECGYRAVNKSHLSRHMR 421
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + HI+THTGEKP+ C +C +R+ + + L H++
Sbjct: 147 YICGECGYRATRKSQLSIHIKTHTGEKPFKCEECGYRAVNKSHLSRHMR 195
Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + + H+++HTGEKPY C QC + +A A L H
Sbjct: 34 YICGECGYRTVRKTNLSRHMKSHTGEKPYNCDQCDYSAAEKAHLDQH 80
Score = 43.5 bits (101), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSH-IRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + C+ H + H EKPY CG+C +R+ + L H+K
Sbjct: 194 MRTHTGERPYKCDQCDYSAAQKSCLDDHRLAKHISEKPYMCGECEYRTVRKSDLSIHMK 252
Score = 43.5 bits (101), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSH-IRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + C+ H + H EKPY CG+C +R+ + L H+K
Sbjct: 307 MRTHTGERPYKCDQCDYSAAQKSCLDDHHLAKHISEKPYMCGECEYRTVRKSDLSIHMK 365
>gi|427794561|gb|JAA62732.1| Putative zinc finger protein, partial [Rhipicephalus pulchellus]
Length = 158
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 58/124 (46%), Gaps = 19/124 (15%)
Query: 83 HSQLSHLDLLDHCKTCSYMIRPNAN--------NTFSPF-CIYCKAVLSTNLNELIEHCR 133
HS +S L C+ C+Y+ + + PF C C A + N N L+ H
Sbjct: 39 HSLVSVQGQLHSCRQCTYVTKTKGDMKKHLCKHTGERPFRCNVCPAAFTQNTN-LVAH-- 95
Query: 134 TCKSMIRTDPFRHKFVCYACDY-FSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLH 192
+R + C C+ FS+N +RSH+RTHTGE+PY+C C + + L
Sbjct: 96 -----VRIHTGERPYSCVHCNASFSHNTT-LRSHLRTHTGERPYSCAYCNASFSQRSTLT 149
Query: 193 YHLK 196
+HL+
Sbjct: 150 HHLR 153
>gi|260782849|ref|XP_002586493.1| hypothetical protein BRAFLDRAFT_58242 [Branchiostoma floridae]
gi|229271607|gb|EEN42504.1| hypothetical protein BRAFLDRAFT_58242 [Branchiostoma floridae]
Length = 610
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 119 AVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAC 178
++T +L++H +RT + C CDY + + HI +HTG+KPY C
Sbjct: 230 GYMTTRNPDLVKH-------MRTHTGEKPYKCDQCDYSAARKSTLCQHIASHTGDKPYMC 282
Query: 179 GQCAFRSASVAGLHYHLK 196
G+C +R+A + L H++
Sbjct: 283 GECGYRTAYKSDLSQHMR 300
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C+Y + + H+RTHTGEKPY C QC + +A + L HL K
Sbjct: 56 YMCGECEYRAAQKSTLSRHMRTHTGEKPYKCDQCDYSTARKSTLDRHLAK 105
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT F C CDY + + H+ HTG+KPY CG+C +R++ + L H+++
Sbjct: 333 MRTHTGEKPFKCDQCDYSTTQKSNLNQHLAMHTGDKPYMCGECGYRTSWKSALSQHVRR 391
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+RT + C CDY + + + H+ HTGEKPY CG+C +R+ + L
Sbjct: 557 MRTHTGEKPYKCDQCDYSAAHKSTLNQHLARHTGEKPYMCGECGYRTTRKSQL 609
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KPY CG+C +R+A + L H++
Sbjct: 19 MRTHTGDKPYRCDQCDYSTAKKCNLDQHLAKHTGDKPYMCGECEYRAAQKSTLSRHMR 76
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KPY CG+C +R+A L H++
Sbjct: 445 MRTHTGDKPYKCDHCDYSAAVKSTLDRHLAIHTGDKPYMCGECGYRTAQKYALSQHMR 502
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C Y + + H+RTHTGEKPY C QC + +A + L+ HL +
Sbjct: 539 MCGECGYRTTKKSHLADHMRTHTGEKPYKCDQCDYSAAHKSTLNQHLAR 587
Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTG+KPY C QC + +A L HL K
Sbjct: 482 YMCGECGYRTAQKYALSQHMRTHTGDKPYKCDQCDYSAAVKCSLDLHLAK 531
Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGEKPY C Q F +A ++ L+ HL
Sbjct: 112 YMCGECGYRAAQKSDLSKHMRTHTGEKPYKCNQRYFSAAQMSTLNQHL 159
Score = 43.1 bits (100), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CDY + + H+ HTG KPY CG+C +R+A L H++
Sbjct: 398 FKCDQCDYSTAQKYSLDLHLIKHTGNKPYKCGECGYRTAQKYALSQHMR 446
Score = 42.7 bits (99), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
++C C Y + + H+RTHTGEKPY C QC + +A A
Sbjct: 280 YMCGECGYRTAYKSDLSQHMRTHTGEKPYKCDQCDYSTAKKA 321
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+R HTGEKP+ C QC + +A L HL
Sbjct: 370 YMCGECGYRTSWKSALSQHVRRHTGEKPFKCDQCDYSTAQKYSLDLHL 417
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ H+G K Y CG+C +R+A + L H++
Sbjct: 75 MRTHTGEKPYKCDQCDYSTARKSTLDRHLAKHSGNKLYMCGECGYRAAQKSDLSKHMR 132
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGEKPY C Q F +A ++ L+ HL
Sbjct: 168 YMCGDCGYMTTRNPDLVKHMRTHTGEKPYKCNQRYFSAAQMSTLNQHL 215
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGEKPY C QC + +A + L H+
Sbjct: 224 YMCGDCGYMTTRNPDLVKHMRTHTGEKPYKCDQCDYSAARKSTLCQHI 271
Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGC------MRSHIRTHTGEKPYACGQCAFRSASVAGLH 192
+RT + C CDY + + H+RTHTGEKP+ C QC + + + L+
Sbjct: 299 MRTHTGEKPYKCDQCDYSTAKKAWAAWESHLSQHMRTHTGEKPFKCDQCDYSTTQKSNLN 358
Query: 193 YHL 195
HL
Sbjct: 359 QHL 361
Score = 40.0 bits (92), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C C Y + + H+RTHTG+KPY C C + +A + L HL
Sbjct: 426 YKCGECGYRTAQKYALSQHMRTHTGDKPYKCDHCDYSAAVKSTLDRHL 473
Score = 39.7 bits (91), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 21/32 (65%)
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
H+RTHTG+KPY C QC + +A L HL K
Sbjct: 18 HMRTHTGDKPYRCDQCDYSTAKKCNLDQHLAK 49
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KP+ CG+C +R+ + L H++
Sbjct: 501 MRTHTGDKPYKCDQCDYSAAVKCSLDLHLAKHTGDKPHMCGECGYRTTKKSHLADHMR 558
>gi|260819146|ref|XP_002604898.1| hypothetical protein BRAFLDRAFT_136246 [Branchiostoma floridae]
gi|229290227|gb|EEN60908.1| hypothetical protein BRAFLDRAFT_136246 [Branchiostoma floridae]
Length = 282
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++T + + C CDY + SH+ HTG+KPY CG+C +R+A AGL H++
Sbjct: 81 MKTHTGKKTYKCDQCDYSKAQKCHLDSHLAKHTGDKPYMCGECGYRTAYKAGLLKHMR 138
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
R ++C C Y + + +HIR HTGEKPY C QC + +A + L+ HL K
Sbjct: 172 RKPYLCGECGYRAALKSSLSTHIRIHTGEKPYKCDQCGYSAAQKSSLNLHLAK 224
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + + H+RTHTGEKPY CGQC + +A L H
Sbjct: 5 YMCGQCGYRTNWKSQLSPHMRTHTGEKPYKCGQCDYSTAWKQQLDRH 51
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C Y + + C+ H++THTG+K Y C QC + A L HL K
Sbjct: 62 FACDKCKYKTAHRYCLSRHMKTHTGKKTYKCDQCDYSKAQKCHLDSHLAK 111
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 148 FVCYACDYFSYNIGCM-RSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + + H+ HT +KPY CG+C +RSA + L H+K
Sbjct: 231 YKCDQCDYSTSQKSSLNKHHLLKHTDKKPYICGECGYRSALKSTLSTHMK 280
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYF-SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY ++ R H+ HT EKP+AC +C +++A L H+K
Sbjct: 24 MRTHTGEKPYKCGQCDYSTAWKQQLDRHHLAKHTSEKPFACDKCKYKTAHRYCLSRHMK 82
Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
IR + C C Y + + H+ HTGEKPY C QC + ++ + L+ H
Sbjct: 194 IRIHTGEKPYKCDQCGYSAAQKSSLNLHLAKHTGEKPYKCDQCDYSTSQKSSLNKH 249
>gi|260781562|ref|XP_002585876.1| hypothetical protein BRAFLDRAFT_110976 [Branchiostoma floridae]
gi|229270937|gb|EEN41887.1| hypothetical protein BRAFLDRAFT_110976 [Branchiostoma floridae]
Length = 348
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 56/124 (45%), Gaps = 21/124 (16%)
Query: 79 CKHCHSQLSHLDLLD-----HCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHC 132
C+ C SQ SH L H TC + R P+ C C + S L+ L H
Sbjct: 217 CERCSSQFSHQGALKRHMRTHTDTCG-LTREK------PYSCEGCSSQFS-RLSALKRH- 267
Query: 133 RTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLH 192
+RT + C C +G ++ H++THTGEKPY C +C+ + + +A +
Sbjct: 268 ------VRTHTGEKPYKCEECSRQFSRLGALKRHVQTHTGEKPYKCEECSRQFSQLANMK 321
Query: 193 YHLK 196
H++
Sbjct: 322 RHMR 325
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RTD + C C+ + ++ HIRTHTGEKPY+C +C + + + L H+
Sbjct: 35 KTHMRTDTGEKPYRCEECNKQFSQLSHLKRHIRTHTGEKPYSCEECNKQFSELGNLKRHM 94
Query: 196 K 196
+
Sbjct: 95 R 95
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C+S+ S LD L ++M + C C S L+ L H
Sbjct: 21 CEECNSRFSQLDHLK-----THMRTDTGEKPYR--CEECNKQFS-QLSHLKRH------- 65
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IRT + C C+ +G ++ H+RTHTGEKP+ C +C+ + + L H++
Sbjct: 66 IRTHTGEKPYSCEECNKQFSELGNLKRHMRTHTGEKPFRCEECSSHFSELVHLKRHMR 123
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C+ +G ++ H+RTHTGEKPY+C +C+ + + L H+
Sbjct: 175 KKHMRTHTGEKPYKCEECNRQFNELGHLKRHMRTHTGEKPYSCERCSSQFSHQGALKRHM 234
Query: 196 K 196
+
Sbjct: 235 R 235
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IRT + C C +G ++ H+RTHTGEKPY C +C + + L H++
Sbjct: 150 IRTHTGEKPYKCEECSRQFSELGSLKKHMRTHTGEKPYKCEECNRQFNELGHLKRHMR 207
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 33/60 (55%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
S + +D + C C+ + +++H+RT TGEKPY C +C + + ++ L H++
Sbjct: 8 SYVLSDKEEKSYKCEECNSRFSQLDHLKTHMRTDTGEKPYRCEECNKQFSQLSHLKRHIR 67
>gi|113931316|ref|NP_001039107.1| novel zinc finger protein [Xenopus (Silurana) tropicalis]
gi|89268765|emb|CAJ83131.1| novel zinc finger protein [Xenopus (Silurana) tropicalis]
Length = 234
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C Y S + +R HIRTHT EKPY C QC++ L H+++
Sbjct: 140 FKCKLCSYASIDASSLRRHIRTHTSEKPYKCQQCSYSCIQKKSLDLHVRR 189
>gi|260822857|ref|XP_002602234.1| hypothetical protein BRAFLDRAFT_216750 [Branchiostoma floridae]
gi|229287541|gb|EEN58246.1| hypothetical protein BRAFLDRAFT_216750 [Branchiostoma floridae]
Length = 234
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + +HIRTHTGEKPY C QC + +A + L+ HL K
Sbjct: 10 YICGECGYRTARRRVLYAHIRTHTGEKPYKCDQCDYSAAQKSNLNQHLAK 59
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + + C CDY + + H R HTGEKPY C +C +R+A + L H++
Sbjct: 142 MRTHTGQKPYKCNQCDYSAAQKANLEQHSRQHTGEKPYTCSECGYRTAKKSDLPIHMR 199
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + +H+ H GEKPY CG+C +R+A + L H++
Sbjct: 95 YKCDQCDYSTTQKSTLDAHLAKHRGEKPYMCGECGYRAAYRSNLSVHMR 143
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + N + H++THTGEKPY C QC + + + L HL K
Sbjct: 67 YICRECGYSTANKCHLSRHMKTHTGEKPYKCDQCDYSTTQKSTLDAHLAK 116
Score = 43.5 bits (101), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTG+KPY C QC + +A A L H ++
Sbjct: 123 YMCGECGYRAAYRSNLSVHMRTHTGQKPYKCNQCDYSAAQKANLEQHSRQ 172
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C Y + + H+RTHTGE+PY C C + +A L+ HL++
Sbjct: 179 YTCSECGYRTAKKSDLPIHMRTHTGERPYKCEYCDYSAALKRTLNRHLRR 228
>gi|260787238|ref|XP_002588661.1| hypothetical protein BRAFLDRAFT_240699 [Branchiostoma floridae]
gi|229273828|gb|EEN44672.1| hypothetical protein BRAFLDRAFT_240699 [Branchiostoma floridae]
Length = 283
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + +R H+RTHTGEKPY C QC + +A+ + L+ HL K
Sbjct: 200 YMCGECGYRAAQKSHLRLHMRTHTGEKPYKCDQCDYSAAASSALNNHLAK 249
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + +R H+RTHTGEKPY C QC + +A + L HL
Sbjct: 144 YMCGECGYRAAQKSHLRLHMRTHTGEKPYKCDQCDYSAAHKSNLDSHL 191
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + SH+ +TG+KPY CG+C +R+A + L H++
Sbjct: 107 MRTHTGEKPYKCDQCDYSAAHKSNLDSHLAIYTGDKPYMCGECGYRAAQKSHLRLHMR 164
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + SH+ +TG+KPY CG+C +R+A + L H++
Sbjct: 163 MRTHTGEKPYKCDQCDYSAAHKSNLDSHLAIYTGDKPYMCGECGYRAAQKSHLRLHMR 220
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + SH+ HTG+KPY CG+C +R+A L H++
Sbjct: 60 YKCDQCDYSAATKSHLDSHLAKHTGDKPYMCGECGYRAAQKFHLRLHMR 108
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + +R H+RTHTGEKPY C QC + +A + L HL
Sbjct: 88 YMCGECGYRAAQKFHLRLHMRTHTGEKPYKCDQCDYSAAHKSNLDSHL 135
Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C CDY + + +H+ H+GEKPY C QC + +A + L HL K
Sbjct: 219 MRTHTGEKPYKCDQCDYSAAASSALNNHLAKHSGEKPYKCYQCDYSAAHKSNLDSHLAK 277
Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSAS 187
++C C + + + H+RTHTGEKPY C QC + +AS
Sbjct: 1 YMCGECGHRTAKKCLLAEHMRTHTGEKPYKCNQCDYSAAS 40
Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 139 IRTDPFRHKFVCYACDYFS---YNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + C CDY + + + +H THTG+K Y C QC + +A+ + L HL
Sbjct: 20 MRTHTGEKPYKCNQCDYSAASNKEVSLITTHENTHTGQKTYKCDQCDYSAATKSHLDSHL 79
Query: 196 KK 197
K
Sbjct: 80 AK 81
>gi|432957776|ref|XP_004085873.1| PREDICTED: oocyte zinc finger protein XlCOF6-like, partial [Oryzias
latipes]
Length = 293
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 61/144 (42%), Gaps = 18/144 (12%)
Query: 53 MSLDQILNLNLSVLLVTTIPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSP 112
+S Q NL + + T + CK SQ+SHL+ S+M FS
Sbjct: 72 ISFSQKSNLKIHMQTHTGEKPFSCKECKKSFSQISHLN--------SHMRTHTGEKPFS- 122
Query: 113 FCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTG 172
C C S N I+ RT T F C CD Y I +++H+ THTG
Sbjct: 123 -CKECDTSFSYKSN--IKKHRT------THTGEKPFTCKECDSSFYQISHLKTHMTTHTG 173
Query: 173 EKPYACGQCAFRSASVAGLHYHLK 196
EKP++C +C ++ L H++
Sbjct: 174 EKPFSCKECKISFNQISTLKTHMR 197
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 54/121 (44%), Gaps = 21/121 (17%)
Query: 79 CKHCHS---QLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC 135
CK C S Q+SHL ++M FS C CK + N++ T
Sbjct: 151 CKECDSSFYQISHLK--------THMTTHTGEKPFS--CKECKI----SFNQIS----TL 192
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT F C C + ++SH RTHTGEKP+ C +C R + + L H+
Sbjct: 193 KTHMRTHTGEKPFSCKECKKSFNQLSHLKSHTRTHTGEKPFTCKECDKRFSQKSKLKTHM 252
Query: 196 K 196
+
Sbjct: 253 R 253
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CD Y I +++H+ THTGEKP++C +C + + L H++
Sbjct: 9 FTCKECDSSFYQISHLQTHMTTHTGEKPFSCKECKKSFSQKSNLKIHMR 57
Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 51/121 (42%), Gaps = 21/121 (17%)
Query: 79 CKHCHS---QLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC 135
CK C S Q+SHL ++M FS C CK S N I
Sbjct: 11 CKECDSSFYQISHLQ--------THMTTHTGEKPFS--CKECKKSFSQKSNLKIH----- 55
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT F C C ++ H++THTGEKP++C +C + ++ L+ H+
Sbjct: 56 ---MRTHTGEKPFSCKECKISFSQKSNLKIHMQTHTGEKPFSCKECKKSFSQISHLNSHM 112
Query: 196 K 196
+
Sbjct: 113 R 113
>gi|260788063|ref|XP_002589070.1| hypothetical protein BRAFLDRAFT_120891 [Branchiostoma floridae]
gi|229274244|gb|EEN45081.1| hypothetical protein BRAFLDRAFT_120891 [Branchiostoma floridae]
Length = 578
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C +G +++H+RTHTGEKPY C +C+ + + ++GL H+
Sbjct: 206 KTHMRTHTGEKPYRCGECSRQFSQLGHLKTHMRTHTGEKPYKCEECSRKFSQMSGLKSHM 265
Query: 196 K 196
+
Sbjct: 266 Q 266
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C +G +++H+RTHTGEKPY C +C+ + + ++GL H +
Sbjct: 50 FRCEECSRQFSQLGNLKTHMRTHTGEKPYRCEECSRKFSQMSGLKSHTQ 98
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C +G ++SH+RTHTGEKPY C +C+ + + L H+
Sbjct: 290 KTHMRTHTGEKPYRCEECSRKFNELGTLKSHMRTHTGEKPYRCEECSKQFSQPGDLKTHM 349
Query: 196 K 196
+
Sbjct: 350 R 350
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 122 STNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
S NEL T KS +RT + C C G +++H+RTHTGEKPY C +C
Sbjct: 308 SRKFNELG----TLKSHMRTHTGEKPYRCEECSKQFSQPGDLKTHMRTHTGEKPYRCEEC 363
Query: 182 AFRSASVAGLHYHLK 196
+ + + + L H++
Sbjct: 364 SRQFSLLGDLKSHMR 378
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C +G ++SH+RTHTGEKPY C +C+ + + + H+
Sbjct: 122 KTHMRTHTGEKPYRCEECSRKFNELGTLKSHMRTHTGEKPYRCEECSKQFSQPGDVKTHM 181
Query: 196 K 196
+
Sbjct: 182 R 182
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 122 STNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
S NEL T KS +RT + C C G +++H+RTH+GEKPY C +C
Sbjct: 140 SRKFNELG----TLKSHMRTHTGEKPYRCEECSKQFSQPGDVKTHMRTHSGEKPYRCEEC 195
Query: 182 AFRSASVAGLHYHLK 196
+ + + + L H++
Sbjct: 196 SRQFSVLGNLKTHMR 210
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 123 TNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
+ L++L H RT R P+ +C C + ++ H+RTHTGEKPY C +C+
Sbjct: 396 SQLDDLKRHMRT---HTREKPY----MCEECSRQFSQLSTLKKHMRTHTGEKPYRCEECS 448
Query: 183 FRSASVAGLHYHLK 196
+ + ++ L H++
Sbjct: 449 RQFSQLSTLKKHMR 462
Score = 43.1 bits (100), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 15/119 (12%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKS 137
+C+ C Q S L L +M + C C S L+ L +H RT
Sbjct: 415 MCEECSRQFSQLSTLK-----KHMRTHTGEKPYR--CEECSRQFS-QLSTLKKHMRT--- 463
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C C + + H+RTHTGEKPY C +C+ + + ++ L H++
Sbjct: 464 HTGEKPYR----CEECSRQFNELDNLEKHMRTHTGEKPYKCEECSRQFSRLSNLKRHMR 518
Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C + ++SH++ HTGEKPY C +C+ + + + L H+
Sbjct: 234 KTHMRTHTGEKPYKCEECSRKFSQMSGLKSHMQAHTGEKPYQCEECSRQFSQLVRLKTHM 293
Query: 196 K 196
+
Sbjct: 294 R 294
Score = 39.3 bits (90), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C + ++SH + HTGEKPY C +C+ + + + L H+
Sbjct: 66 KTHMRTHTGEKPYRCEECSRKFSQMSGLKSHTQAHTGEKPYQCEECSRQFSQLVRLKTHM 125
Query: 196 K 196
+
Sbjct: 126 R 126
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C + +++H+RTHTGEKPY C +C+ + + L H++
Sbjct: 106 YQCEECSRQFSQLVRLKTHMRTHTGEKPYRCEECSRKFNELGTLKSHMR 154
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C + +++H+RTHTGEKPY C +C+ + + L H++
Sbjct: 274 YQCEECSRQFSQLVRLKTHMRTHTGEKPYRCEECSRKFNELGTLKSHMR 322
Score = 36.2 bits (82), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C +G ++SH+RTHT EKPY +C+ + + + L H+
Sbjct: 346 KTHMRTHTGEKPYRCEECSRQFSLLGDLKSHMRTHTREKPYRFEECSRQFSQLDDLKRHM 405
Query: 196 K 196
+
Sbjct: 406 R 406
>gi|348535670|ref|XP_003455322.1| PREDICTED: gastrula zinc finger protein 5-1-like [Oreochromis
niloticus]
Length = 417
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 9/89 (10%)
Query: 112 PF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
PF C YCK +TN T K RT + C CD + ++ H+R H
Sbjct: 328 PFKCTYCKKKFATNT--------TLKRHTRTHTGEKPYKCTVCDKVFGHKTDLKGHMRMH 379
Query: 171 TGEKPYACGQCAFRSASVAGLHYHLKKTY 199
TGEKPY C C + ++ LH H ++ +
Sbjct: 380 TGEKPYKCTSCGEQFSTWLKLHKHKQRAH 408
Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
M+ H+R HTGEKPY C +C A + HL+
Sbjct: 288 MKKHMRIHTGEKPYTCNECGKEFADSSAFKNHLR 321
>gi|260795649|ref|XP_002592817.1| hypothetical protein BRAFLDRAFT_65402 [Branchiostoma floridae]
gi|229278041|gb|EEN48828.1| hypothetical protein BRAFLDRAFT_65402 [Branchiostoma floridae]
Length = 1179
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 56/139 (40%), Gaps = 29/139 (20%)
Query: 79 CKHCHSQLSHLDLLDH------------CKTCSYMIRPNAN--------NTFSPF-CIYC 117
CK C Q S LD L CK CS N P+ C C
Sbjct: 395 CKECSRQFSQLDSLKKHLRTHTGEKPYKCKECSRQFSQLGNLKTHMLTHTREKPYRCEKC 454
Query: 118 KAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA 177
S +L++L +H +RT + C C+ +G + HIRTHTGEKPY
Sbjct: 455 SRQFS-DLDDLKKH-------MRTHTGEKPYKCEECNRQFSRLGHLEEHIRTHTGEKPYN 506
Query: 178 CGQCAFRSASVAGLHYHLK 196
C +C+ + + + L H +
Sbjct: 507 CEECSRQFSRLGHLKRHKR 525
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 12/124 (9%)
Query: 84 SQLSHLDLLDHCKTCSYMIR-PNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------- 135
SQL HL + T R N F+ + K + T+ E +C C
Sbjct: 966 SQLGHLKIHMRTHTGEKPYRCEECNRQFNEL-GHLKTHMRTHTGEKPHNCEECSRQFSNL 1024
Query: 136 ---KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLH 192
K+ +RT + C C +G +++H+RTHTGEKPY C +C+ + + + L
Sbjct: 1025 GHLKTHMRTHTGEKPYRCEECSRQFSELGHLKTHMRTHTGEKPYRCEECSRQFSQLGDLK 1084
Query: 193 YHLK 196
H++
Sbjct: 1085 IHMR 1088
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IRT + C C +G ++ HIRTHTGEKPY C +C+ + + + L HL
Sbjct: 353 KRHIRTHTGEKPYTCEECSKQFSRLGHLKIHIRTHTGEKPYRCKECSRQFSQLDSLKKHL 412
Query: 196 K 196
+
Sbjct: 413 R 413
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 57/143 (39%), Gaps = 18/143 (12%)
Query: 54 SLDQILNLNLSVLLVTTIPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF 113
Q+ NL +L T + C+ C Q S LD L +M +
Sbjct: 429 QFSQLGNLKTHMLTHTR---EKPYRCEKCSRQFSDLDDLK-----KHMRTHTGEKPYK-- 478
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C C S L L EH IRT + C C +G ++ H RTHTGE
Sbjct: 479 CEECNRQFS-RLGHLEEH-------IRTHTGEKPYNCEECSRQFSRLGHLKRHKRTHTGE 530
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
KPY C +C+ + + + L H++
Sbjct: 531 KPYRCEECSRQYSQLCHLKAHMR 553
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
S +R+ ++ C C+ +G +++H+RTHTGEKPY C +C+ + + + L H++
Sbjct: 21 SSVRSVGEEKRYRCEECNKQFSQLGNLKAHMRTHTGEKPYKCEECSKQFSELGHLKGHMR 80
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT ++C C +G ++ H+RTHTGEKPY C +C+ + + + L H++
Sbjct: 779 MRTHTGEKPYMCEKCSRQFNELGSLQQHMRTHTGEKPYRCEECSMQFSQLGHLKKHMR 836
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
S +R+D ++ C C + +++H+RTHTGEKPY C +C+ + + ++ L H++
Sbjct: 665 SSVRSDRQEKRYRCEECSKQFSQLCHLKTHLRTHTGEKPYKCEECSRQFSQLSDLKRHMR 724
Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C +G ++ H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 1056 KTHMRTHTGEKPYRCEECSRQFSQLGDLKIHMRTHTGEKPYRCEECSRQFSKLDSLKKHM 1115
Query: 196 K 196
+
Sbjct: 1116 R 1116
Score = 43.1 bits (100), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 49/118 (41%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C SQ S LD L +M + C C S N S
Sbjct: 146 CEECSSQFSQLDHLK-----KHMRTHTGEKPYR--CEECSRQFSVQCN--------LHSH 190
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C C+ + ++ H+RTHTGEKPY C +C+ + + + L HL+
Sbjct: 191 MRTHTGDKIFKCEECNRQFSLLENLKRHMRTHTGEKPYRCEECSRQFSELGSLKTHLR 248
Score = 43.1 bits (100), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C + ++ H+RTHTGEKPY C +C+ + + LH H+
Sbjct: 132 KRHVRTHTGEKPYTCEECSSQFSQLDHLKKHMRTHTGEKPYRCEECSRQFSVQCNLHSHM 191
Query: 196 K 196
+
Sbjct: 192 R 192
Score = 42.7 bits (99), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
IRT + C C + ++ H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 384 IRTHTGEKPYRCKECSRQFSQLDSLKKHLRTHTGEKPYKCKECSRQFSQLGNLKTHM 440
Score = 42.7 bits (99), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C + ++ H+RTHTGEKPY C +C + + + L+ H+
Sbjct: 692 KTHLRTHTGEKPYKCEECSRQFSQLSDLKRHMRTHTGEKPYRCEKCGGQFSQLGNLNTHM 751
Query: 196 K 196
+
Sbjct: 752 R 752
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 122 STNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
S NEL + + +RT + C C +G ++ H+RTHTGEKPY C +C
Sbjct: 794 SRQFNELG----SLQQHMRTHTGEKPYRCEECSMQFSQLGHLKKHMRTHTGEKPYRCEEC 849
Query: 182 AFRSASVAGLHYHLK 196
+ + + L H++
Sbjct: 850 SRQFNELNSLKIHMR 864
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
K+ +RT + C C +G ++ H+RTHTGEKPY C +C
Sbjct: 48 KAHMRTHTGEKPYKCEECSKQFSELGHLKGHMRTHTGEKPYRCEEC 93
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 133 RTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLH 192
R K+ +RT + C C +G ++ HIRTHT EKPY C +C+ + + + L
Sbjct: 885 RNLKTHMRTHTGEKLYRCEECSRQFSELGVLKRHIRTHTKEKPYRCEECSSQFSRLYSLK 944
Query: 193 YHLK 196
H++
Sbjct: 945 IHMR 948
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C + ++ H+RTHTGEKPY C +C+ + + + L H++
Sbjct: 1087 MRTHTGEKPYRCEECSRQFSKLDSLKKHMRTHTGEKPYRCEECSRQFSQLDNLKRHMR 1144
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 11/86 (12%)
Query: 107 NNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYF 156
+ FS C + K L T+ E C C K +RT + C C
Sbjct: 682 SKQFSQLC-HLKTHLRTHTGEKPYKCEECSRQFSQLSDLKRHMRTHTGEKPYRCEKCGGQ 740
Query: 157 SYNIGCMRSHIRTHTGEKPYACGQCA 182
+G + +H+RTHTGEKPY C +C+
Sbjct: 741 FSQLGNLNTHMRTHTGEKPYRCEECS 766
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C + ++ H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 832 KKHMRTHTGEKPYRCEECSRQFNELNSLKIHMRTHTGEKPYKCEECSRQFSDLRNLKTHM 891
Query: 196 K 196
+
Sbjct: 892 R 892
Score = 39.3 bits (90), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 10/89 (11%)
Query: 118 KAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHI 167
K + T+ E + C C K IRT + C C + ++ H+
Sbjct: 888 KTHMRTHTGEKLYRCEECSRQFSELGVLKRHIRTHTKEKPYRCEECSSQFSRLYSLKIHM 947
Query: 168 RTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R+HTGEKPY C +C + + + L H++
Sbjct: 948 RSHTGEKPYRCEECGGQFSQLGHLKIHMR 976
>gi|432114063|gb|ELK36110.1| Zinc finger protein 827, partial [Myotis davidii]
Length = 1334
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 19/134 (14%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCK---AVLSTNLN---ELIEHC 132
C CH + + L K C + PFCIY A + +L ++ C
Sbjct: 1034 CDVCHKFMKTPEQLLEHKKCHTV---PTGGLKCPFCIYSTNRPAAMECHLKTHYKMEYKC 1090
Query: 133 RTCKSM------IRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
R C+++ + T H+ + C C Y S + H+R HTGE+P+ C QC+
Sbjct: 1091 RICQTVKANQLELETHTREHRLGNHYKCDQCGYLSKTANKLIEHVRVHTGERPFHCDQCS 1150
Query: 183 FRSASVAGLHYHLK 196
+ L+ H K
Sbjct: 1151 YSCKRKDNLNLHKK 1164
>gi|332820436|ref|XP_517584.3| PREDICTED: zinc finger protein 827 [Pan troglodytes]
Length = 1482
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 19/134 (14%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCK---AVLSTNLN---ELIEHC 132
C CH + + L K C + PFCIY A + +L ++ C
Sbjct: 1182 CDVCHKFMKTPEQLLEHKKCHTV---PTGGLKCPFCIYSTNRPAAMECHLKTHYKMEYKC 1238
Query: 133 RTCKSM------IRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
R C+++ + T H+ + C C Y S + H+R HTGE+P+ C QC+
Sbjct: 1239 RICQTVKANQLELETHTREHRLGNHYKCDQCGYLSKTANKLIEHVRVHTGERPFHCDQCS 1298
Query: 183 FRSASVAGLHYHLK 196
+ L+ H K
Sbjct: 1299 YSCKRKDNLNLHKK 1312
>gi|327267680|ref|XP_003218627.1| PREDICTED: zinc finger protein Pegasus-like isoform 2 [Anolis
carolinensis]
Length = 444
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 109 CRYCNYA-SKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 160
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 161 KPYKCELCSFRCSDRSNLSHHRRRKH 186
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 103 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 155
>gi|260835600|ref|XP_002612796.1| hypothetical protein BRAFLDRAFT_233081 [Branchiostoma floridae]
gi|229298176|gb|EEN68805.1| hypothetical protein BRAFLDRAFT_233081 [Branchiostoma floridae]
Length = 396
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C+Y + N + H+ HTGEKPY CG C FR+A + L H++
Sbjct: 334 MRTHTGEKPYKCDQCNYSAVNKSTLDQHMAKHTGEKPYMCGGCGFRTARKSTLSRHMR 391
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C CDY + + HIR HT EKPY CG+C +R+ L H++
Sbjct: 146 YMCGECDYSARYKSALVIHIRKHTNEKPYMCGECGYRTTQQCSLSMHMR 194
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C CDY + + HIR HT EKPY CG+C +R+ L H++
Sbjct: 287 YMCGECDYSARYKSALVIHIRKHTNEKPYMCGECGYRTTQQCSLSMHMR 335
Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CDY + + HI TH+G KP+ CG+C +R+ + L H++
Sbjct: 62 FKCDQCDYSAVQKSHLDYHIATHSGNKPFMCGECGYRTVQKSDLSRHMR 110
Score = 42.7 bits (99), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + H+RTHTGEKPY C C + +A + L HL K
Sbjct: 90 FMCGECGYRTVQKSDLSRHMRTHTGEKPYKCDLCDYSAALKSNLAQHLAK 139
Score = 42.7 bits (99), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
IR ++C C Y + + H+RTHTGEKPY C QC + + + + L H+ K
Sbjct: 165 IRKHTNEKPYMCGECGYRTTQQCSLSMHMRTHTGEKPYKCDQCNYSAVNKSTLDQHMAK 223
Score = 42.7 bits (99), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
IR ++C C Y + + H+RTHTGEKPY C QC + + + + L H+ K
Sbjct: 306 IRKHTNEKPYMCGECGYRTTQQCSLSMHMRTHTGEKPYKCDQCNYSAVNKSTLDQHMAK 364
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC-AFRSASVAGLHYHLK 196
+RT + C C+Y + N + H+ HTGEKPY CG C A + +S + L H++
Sbjct: 193 MRTHTGEKPYKCDQCNYSAVNKSTLDQHMAKHTGEKPYMCGGCGAGQDSSKSDLSRHMR 251
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C Y ++ H+R HTGEKPY C QC + + + H+
Sbjct: 5 FMCEDCGYRTFQKSRFSVHMRIHTGEKPYKCDQCDYSATQKPNMDKHI 52
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 148 FVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHL 195
+ C CDY + M HI HTGEKP+ C QC + + + L YH+
Sbjct: 33 YKCDQCDYSATQKPNMDKHIAAKHTGEKPFKCDQCDYSAVQKSHLDYHI 81
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 113 FCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTG 172
C C A ++ ++L H +RT + C CDY + + H+ H G
Sbjct: 231 MCGGCGAGQDSSKSDLSRH-------MRTHTGEKPYKCDLCDYSAALKSNLAQHLAKHQG 283
Query: 173 EKPYACGQCAFRSASVAGLHYHLKK 197
KPY CG+C + + + L H++K
Sbjct: 284 LKPYMCGECDYSARYKSALVIHIRK 308
>gi|111550152|gb|ABH10098.1| BORIS transcription factor transcript variant C4 [Homo sapiens]
Length = 427
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 324 TSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 383
Query: 190 GLHYHLK 196
L H++
Sbjct: 384 KLKRHMR 390
>gi|301790791|ref|XP_002930406.1| PREDICTED: zinc finger protein 333-like [Ailuropoda melanoleuca]
Length = 685
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 23/104 (22%)
Query: 112 PF-CIYCKAVLSTNLNELIEH----------CRTC----------KSMIRTDPFRHKFVC 150
PF C C + N N ++ C+ C +S +RT F C
Sbjct: 441 PFECAQCGKTFTRNFNLILHQRNHTGEKPYECKDCGKAFNQPSSLRSHVRTHTGEKPFGC 500
Query: 151 YACDYFSYNIGCMRSHIRTHTGEKPYACGQCA--FRSASVAGLH 192
C +++H+RTHT EKPYAC QC FR+++ +H
Sbjct: 501 AQCGKAFREHSSLKTHLRTHTREKPYACSQCGKPFRTSTHLNVH 544
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C C VLS T KS +RT +VC C +R H RTHTG+
Sbjct: 556 CATCGQVLS--------RLSTLKSHMRTHTGEKPYVCQECGRAFSEPSSLRKHARTHTGK 607
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
KPYAC +C + L H++
Sbjct: 608 KPYACQECGRAFGQSSHLLVHVR 630
Score = 44.7 bits (104), Expect = 0.023, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 10/89 (11%)
Query: 118 KAVLSTNLNELIEHCRTCKSMIRTDPFR--HK--------FVCYACDYFSYNIGCMRSHI 167
K L T+ E C C RT HK + C C + ++SH+
Sbjct: 514 KTHLRTHTREKPYACSQCGKPFRTSTHLNVHKRIHTGEKLYECATCGQVLSRLSTLKSHM 573
Query: 168 RTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RTHTGEKPY C +C + + L H +
Sbjct: 574 RTHTGEKPYVCQECGRAFSEPSSLRKHAR 602
Score = 43.5 bits (101), Expect = 0.053, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 12/62 (19%)
Query: 132 CRTCKSMIR--TDPFRHK--------FVCYAC-DYFSYNIGCMRSHIRTHTGEKPYACGQ 180
C C+ R +D RH+ F C C F Y+ +R H+RTHTGEKP+ C Q
Sbjct: 388 CSKCEKAFRYSSDLSRHEKTHTAEKCFECQECRQAFKYSSN-LRRHLRTHTGEKPFECAQ 446
Query: 181 CA 182
C
Sbjct: 447 CG 448
Score = 39.3 bits (90), Expect = 0.81, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLH 192
RT + + C C + H+RTHT KPY C QC AFR +S +H
Sbjct: 602 RTHTGKKPYACQECGRAFGQSSHLLVHVRTHTAGKPYECNQCEKAFRHSSSLTVH 656
>gi|260786771|ref|XP_002588430.1| hypothetical protein BRAFLDRAFT_116992 [Branchiostoma floridae]
gi|229273592|gb|EEN44441.1| hypothetical protein BRAFLDRAFT_116992 [Branchiostoma floridae]
Length = 1108
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC+ + + +EL EH +T P F C CD+ + +R H+ HTGE
Sbjct: 22 CWYCE-FSTYSSSELSEH-------EKTHPKDKPFKCNHCDFSAKYRSTLRQHLLRHTGE 73
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
KP+ C C FR+A + L H++
Sbjct: 74 KPFMCKDCGFRTAQKSRLSEHMR 96
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++ C CD+ + ++ H HTGEKPY CG+C FR+A + L HL
Sbjct: 559 QYKCDQCDFSTARESSLKLHRAKHTGEKPYRCGECGFRTAIKSSLTQHL 607
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
VC C Y + N + +H++TH+GEKPY C QC + +A L HL+
Sbjct: 1030 LVCVECGYRTSNKTSLANHLKTHSGEKPYKCDQCDYSAAQKGTLTRHLQ 1078
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 136 KSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+S +R RH F+C C + + N + HIR HTGEKPY C QC + +A + L
Sbjct: 405 RSTLRQHLVRHTGEKPFMCKDCGFRTANKYQLTRHIRIHTGEKPYKCDQCDYSAAEKSTL 464
Query: 192 HYHLKK 197
H K
Sbjct: 465 TKHQTK 470
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + +R H+++H+ EKP+ C QC F + + L HL K
Sbjct: 477 FLCNECAYRTTHKAYLRDHMKSHSAEKPFKCDQCDFAAVRKSNLTRHLAK 526
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +R+ +F C CDY + + H+ H EK Y CG+C F +A L HL
Sbjct: 148 KGHMRSHTAERRFKCDQCDYAAVKQSNLTRHLEKHATEKSYVCGECGFSTARKDSLIKHL 207
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CD+ + + ++ H HTGEKP+AC +C FR+ + L H+K
Sbjct: 728 YNCDQCDFSTAHRPTLKRHQAKHTGEKPFACVECGFRTTCNSSLLAHMK 776
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 24/50 (48%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C Y + H++ HTGEKPY C QC F +A L H K
Sbjct: 700 YTCSECGYRAARKAVFIRHMKVHTGEKPYNCDQCDFSTAHRPTLKRHQAK 749
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C++ + +R H+ HTGEKP+ C C FR+A+ L H++
Sbjct: 393 FKCDHCNFSARYRSTLRQHLVRHTGEKPFMCKDCGFRTANKYQLTRHIR 441
Score = 39.3 bits (90), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHT-GEKPYACGQCAFRSASVAGLHYHLK 196
+ C CD+ + + H HT G KP+ CGQC +R+A + L HLK
Sbjct: 840 YKCSKCDFSAEQKSSVDEHYVIHTTGGKPFMCGQCEYRTARKSDLTEHLK 889
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 165 SHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+H+RTHT EKPY C QC + + + L HL K
Sbjct: 991 NHLRTHTSEKPYKCNQCDYSAPQKSSLDKHLAK 1023
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 27/58 (46%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IR + C CDY + + H H EKP+ C +CA+R+ A L H+K
Sbjct: 440 IRIHTGEKPYKCDQCDYSAAEKSTLTKHQTKHNTEKPFLCNECAYRTTHKAYLRDHMK 497
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C + + + ++ H+R+HT E+ + C QC + + + L HL+K
Sbjct: 132 FLCDECGFRTTHKAFLKGHMRSHTAERRFKCDQCDYAAVKQSNLTRHLEK 181
Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++T + C CD+ + + + H+ THTG+K Y C QC FR+A L H+
Sbjct: 775 MKTHSSEKPYKCDQCDHSTAHKYALNRHLLTHTGQKRYMCDQCDFRTAKRYNLLRHV 831
Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL-HYHLKKT 198
++C C Y + + + H+RTHTGE P C QC + + L H+H K T
Sbjct: 925 YMCEMCGYKTAGMTELSHHMRTHTGENPCQCDQCYSSATEKSSLNHHHTKHT 976
>gi|260806384|ref|XP_002598064.1| hypothetical protein BRAFLDRAFT_85721 [Branchiostoma floridae]
gi|229283335|gb|EEN54076.1| hypothetical protein BRAFLDRAFT_85721 [Branchiostoma floridae]
Length = 311
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT C CDY + + H+ HTGEKPY CG C FR+A + L H++
Sbjct: 249 MRTHTGEKPHKCDQCDYSATQKSSLNKHLAKHTGEKPYMCGDCGFRTAWKSTLSKHMR 306
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + H+RTHTGEKP+ C QC + + + L+ HL K
Sbjct: 230 FMCGECGYRTAQKSTLSQHMRTHTGEKPHKCDQCDYSATQKSSLNKHLAK 279
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGEKPY C QC + +A L YH+
Sbjct: 173 YMCGECGYRAATRCTLSKHMRTHTGEKPYKCEQCDYSAAQKPHLDYHM 220
Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H THTG+KPY CG+C +R+A+ L H++
Sbjct: 145 YKCDQCDYSATRKVNLGIHQTTHTGDKPYMCGECGYRAATRCTLSKHMR 193
Score = 43.1 bits (100), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H HTGE+PY CG+C +R+A + L H++
Sbjct: 89 YKCDQCDYSTAWKTHLVEHRTKHTGEQPYMCGECGYRTARKSDLSKHMR 137
Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKP+ CG+C +R+A + L H++
Sbjct: 192 MRTHTGEKPYKCEQCDYSAAQKPHLDYHMAAKHTGEKPFMCGECGYRTAQKSTLSQHMR 250
>gi|260831890|ref|XP_002610891.1| hypothetical protein BRAFLDRAFT_126280 [Branchiostoma floridae]
gi|229296260|gb|EEN66901.1| hypothetical protein BRAFLDRAFT_126280 [Branchiostoma floridae]
Length = 853
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 51/128 (39%), Gaps = 21/128 (16%)
Query: 81 HCHSQLSHLDLLDH-CKTCSY-----------MIRPNANNTFSPF-CIYCKAVLSTNLNE 127
H H Q+ H H C C Y M + SP+ C C +
Sbjct: 691 HKHIQVHHTGEKPHKCTLCGYRAAHKRGLAAHMRSNHTTPNKSPYACTQC--------DY 742
Query: 128 LIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSAS 187
+ EH + +R FVC CD+ + MR H++THTG KP+ C C +R+A
Sbjct: 743 ITEHRIHLTAHMRKHTGAKPFVCRLCDFRTAYRDSMRQHVQTHTGAKPFKCKLCDYRAAR 802
Query: 188 VAGLHYHL 195
+ H+
Sbjct: 803 STWITSHM 810
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 13/119 (10%)
Query: 79 CKHC-HSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKS 137
CK C +S + DL H + +P+ C C + + L H R+
Sbjct: 677 CKQCDYSAVVKRDLHKHIQVHHTGEKPHK-------CTLC-GYRAAHKRGLAAHMRSN-- 726
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
T P + + C CDY + + + +H+R HTG KP+ C C FR+A + H++
Sbjct: 727 --HTTPNKSPYACTQCDYITEHRIHLTAHMRKHTGAKPFVCRLCDFRTAYRDSMRQHVQ 783
Score = 43.5 bits (101), Expect = 0.054, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTH-TGEKPYACGQCAFRSASVAGLHYHLKKTY 199
F C CDY + + HI+ H TGEKP+ C C +R+A GL H++ +
Sbjct: 675 FKCKQCDYSAVVKRDLHKHIQVHHTGEKPHKCTLCGYRAAHKRGLAAHMRSNH 727
Score = 40.8 bits (94), Expect = 0.30, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 32/61 (52%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K ++R F+C C + +++ +H + H+G+KP+ C QC + + LH H+
Sbjct: 635 KHILRHHSGEKPFMCEYCGFRTFHSWNFTNHQKLHSGDKPFKCKQCDYSAVVKRDLHKHI 694
Query: 196 K 196
+
Sbjct: 695 Q 695
Score = 36.2 bits (82), Expect = 8.4, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Query: 142 DPFRHKFVCYACDYFSYNIGCMRSH-----IRTHTGEKPYACGQCAFRSASVAGLHYHL 195
D + F C CDY + ++ H +R EK + C C F SAS++ L H+
Sbjct: 456 DEPKETFKCEECDYVTDTRSKLKGHWYYWHVRKKNAEKKHKCKDCDFASASLSDLRQHM 514
>gi|194746273|ref|XP_001955605.1| suppressor of hairy wing [Drosophila ananassae]
gi|190628642|gb|EDV44166.1| suppressor of hairy wing [Drosophila ananassae]
Length = 907
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 16/126 (12%)
Query: 79 CKHCHSQLS---HLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRT- 134
CK C + HL +CS N N+T S C C V L+ L H +
Sbjct: 351 CKICGKDFTRSYHLKRHQKYSSCS----ANENDTMS--CKVCDRVF-YRLDNLRSHLKHH 403
Query: 135 CKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+ + P +++C+ C Y++ + HIRTHTGEKP+ C C + +++ L H
Sbjct: 404 LGTQVVKKP---EYMCHVCKNCFYSLSTLNIHIRTHTGEKPFDCDLCDKKFSALVALKKH 460
Query: 195 LKKTYH 200
+ YH
Sbjct: 461 --RRYH 464
>gi|332207881|ref|XP_003253024.1| PREDICTED: transcriptional repressor CTCFL isoform 2 [Nomascus
leucogenys]
Length = 640
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 308 TSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 367
Query: 190 GLHYHLK 196
L H++
Sbjct: 368 KLKRHMR 374
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV L++H +T K+ +F C C Y M +HIRTHTGE
Sbjct: 444 CRYCSAVFHERY-ALMQHQKTHKN-------EKRFKCEHCSYACKQERHMTAHIRTHTGE 495
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KP+ C C FR + H+ + YH
Sbjct: 496 KPFTCLSCNKCFRQKQLLNAHF---RKYH 521
Score = 43.5 bits (101), Expect = 0.048, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +R+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 342 KRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEKPYECHICHARFTQNGTMKTHI 401
Score = 37.7 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 130 EHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSAS 187
E ++ K+ +T + F C C + + + H++THT EKP+ C C FR+ +
Sbjct: 223 EKAKSTKNQRKTKGAKRTFHCDVCMFTASRMSSFNRHMKTHTNEKPHLCHLCLKTFRTVT 282
Query: 188 VAGLHYHL 195
+ H ++
Sbjct: 283 LLRNHVNI 290
>gi|260787851|ref|XP_002588965.1| hypothetical protein BRAFLDRAFT_89156 [Branchiostoma floridae]
gi|229274137|gb|EEN44976.1| hypothetical protein BRAFLDRAFT_89156 [Branchiostoma floridae]
Length = 351
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IRT F C CDY S + H+ HTG+KPY CG+C +R+A + L H++
Sbjct: 187 IRTHTGGKPFKCDQCDYSSKRKSNLNQHLAMHTGDKPYMCGECGYRAARKSHLSQHMR 244
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT C CDYFS G + H+ HTG+KPY CG+C +R+ L H++
Sbjct: 131 MRTHTGEKPNKCDQCDYFSATKGNLDYHLAKHTGDKPYMCGECGYRATQKCHLSQHIR 188
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C Y + + H+RTHTG+KPY CGQC + +A + L HL K
Sbjct: 1 MCGECGYRTARKSTLSRHMRTHTGDKPYKCGQCGYSAALKSNLDQHLAK 49
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+RTHTGEKP C QC + SA+ L YHL K
Sbjct: 112 YMCGECGYRTTHKSNLAQHMRTHTGEKPNKCDQCDYFSATKGNLDYHLAK 161
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTG+KPY C QC + AG YHLK+
Sbjct: 280 YMCGECGYRTVQKSHLSEHLRTHTGDKPYKCDQCDY----SAGKKYHLKR 325
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + F C CD+ + + H+ HTG+KPY CG+C +R+ + L HL+
Sbjct: 243 MRTHTGKKPFKCDQCDFSAAQKYSLDRHLAKHTGDKPYMCGECGYRTVQKSHLSEHLR 300
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + +H+RTHTGEKPY C QC + +A + L+ HL +
Sbjct: 56 YMCGECGYRATQKCHLSNHMRTHTGEKPYKCDQCDYSAAQKSTLNQHLAR 105
Score = 43.1 bits (100), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTG+KP+ C QC F +A L HL K
Sbjct: 224 YMCGECGYRAARKSHLSQHMRTHTGKKPFKCDQCDFSAAQKYSLDRHLAK 273
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + HIRTHTG KP+ C QC + S + L+ HL
Sbjct: 168 YMCGECGYRATQKCHLSQHIRTHTGGKPFKCDQCDYSSKRKSNLNQHL 215
Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C Y + + H+ HTGEKPY CG+C +R+ L H++
Sbjct: 19 MRTHTGDKPYKCGQCGYSAALKSNLDQHLAKHTGEKPYMCGECGYRATQKCHLSNHMR 76
>gi|260782543|ref|XP_002586345.1| hypothetical protein BRAFLDRAFT_253443 [Branchiostoma floridae]
gi|229271449|gb|EEN42356.1| hypothetical protein BRAFLDRAFT_253443 [Branchiostoma floridae]
Length = 263
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + HI HTG+KPY CG+C +R+A + L H+K
Sbjct: 188 MRTHTGEKPYKCDQCDYSAAQTSTLNRHIAKHTGDKPYMCGECRYRTAEKSHLSEHMK 245
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + + H+RTHTGEKPY C QC + +A + L HL
Sbjct: 113 YMCGECGYRATHKSALSKHMRTHTGEKPYKCDQCDYSAAKKSNLDQHL 160
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+RTHTGEKPY C QC + +A + L+ H+ K
Sbjct: 169 YMCGECGYRATHKSDLSKHMRTHTGEKPYKCDQCDYSAAQTSTLNRHIAK 218
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KPY CG+C +R+ + L H++
Sbjct: 132 MRTHTGEKPYKCDQCDYSAAKKSNLDQHLAIHTGDKPYMCGECGYRATHKSDLSKHMR 189
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGEKPY C QC + +A + L+ HL
Sbjct: 1 YICGKCGYRATYKCVLSKHMRTHTGEKPYKCDQCDYSAAHKSNLNRHL 48
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTG+KPY CG+C +R+ + L H++
Sbjct: 85 YKCDQCDYSAAKKFNLDQHLAIHTGDKPYMCGECGYRATHKSALSKHMR 133
Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + H+ HT KPY CG+C FR+ L H++
Sbjct: 20 MRTHTGEKPYKCDQCDYSAAHKSNLNRHLANHTDAKPYMCGECGFRTTQKCHLSEHMR 77
Score = 39.7 bits (91), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C + + + H+R HTGEKPY C QC + +A L HL
Sbjct: 57 YMCGECGFRTTQKCHLSEHMRNHTGEKPYKCDQCDYSAAKKFNLDQHL 104
Score = 36.6 bits (83), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
++C C Y + + H++THTGE+PY C QC
Sbjct: 225 YMCGECRYRTAEKSHLSEHMKTHTGERPYTCDQC 258
>gi|410987789|ref|XP_004000177.1| PREDICTED: zinc finger protein ZFAT isoform 1 [Felis catus]
Length = 1247
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 272 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 321
Score = 41.6 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 274 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 325
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC CAF S L H+++ +
Sbjct: 326 K-FACDYCAFTCLSKGHLKVHVERVH 350
Score = 38.1 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 46/117 (39%), Gaps = 24/117 (20%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 915 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 965
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+F C CDY + + H+ H KP+ C C + S +++G LK+ Y+
Sbjct: 966 DGKQFKCTVCDYTAAQKPQLLRHMEQHASFKPFRCAHCHY-SCNISG---SLKRHYN 1018
Score = 37.4 bits (85), Expect = 3.2, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 886 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 934
>gi|332023650|gb|EGI63878.1| Zinc finger protein 569 [Acromyrmex echinatior]
Length = 856
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 40/147 (27%), Positives = 56/147 (38%), Gaps = 41/147 (27%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEH------ 131
+C C+ H LL + RP+A C +C + T N LI H
Sbjct: 477 VCNKCNKSFKHKQLLQRHQLVHSDNRPHA-------CKFCNSSFKTKAN-LINHQSTHTG 528
Query: 132 -----CRTCKSMIRTDPFRHK---------------FVCYACD-YFSYNIGCMRSHIRTH 170
C CK F HK + C C FS N G ++ H+R H
Sbjct: 529 QKKYLCEICKQQ-----FAHKTSLTLHYRWHNGQKPYTCTVCQKSFSQN-GNLQEHMRIH 582
Query: 171 TGEKPYACGQCAFRSASVAGLHYHLKK 197
TGEKPY+C C + + + H+K+
Sbjct: 583 TGEKPYSCDFCGRKFTTSSQFKLHVKR 609
Score = 41.2 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 29/66 (43%)
Query: 131 HCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAG 190
H T K +R F C C+ ++ H+R HTGEKPY+C C A +
Sbjct: 627 HKDTWKCHVRRHKGERPFQCNQCNRRFTEQWALKKHLRLHTGEKPYSCDVCGKAFADCSN 686
Query: 191 LHYHLK 196
L H K
Sbjct: 687 LTKHKK 692
Score = 40.0 bits (92), Expect = 0.51, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 53/150 (35%), Gaps = 31/150 (20%)
Query: 69 TTIPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNE 127
+T Q LC+ C Q +H S + +N P+ C C+ S N N
Sbjct: 524 STHTGQKKYLCEICKQQFAH--------KTSLTLHYRWHNGQKPYTCTVCQKSFSQNGN- 574
Query: 128 LIEHCR-----------------TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSH 166
L EH R T S + RH + C C + + H
Sbjct: 575 LQEHMRIHTGEKPYSCDFCGRKFTTSSQFKLHVKRHTGERPWKCEFCSKSFLHKDTWKCH 634
Query: 167 IRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+R H GE+P+ C QC R L HL+
Sbjct: 635 VRRHKGERPFQCNQCNRRFTEQWALKKHLR 664
>gi|260832562|ref|XP_002611226.1| hypothetical protein BRAFLDRAFT_138781 [Branchiostoma floridae]
gi|229296597|gb|EEN67236.1| hypothetical protein BRAFLDRAFT_138781 [Branchiostoma floridae]
Length = 314
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + N + H+RTHTGEKPY C QC + +A L +H+ K
Sbjct: 176 FMCGECGYRTANRYDLSRHMRTHTGEKPYKCDQCEYSAAHKVSLDHHITK 225
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++ C CDY + + + +H R HTGEKPY C QC + +A L H+
Sbjct: 6 QYACVECDYRTASKTKLSTHTRKHTGEKPYKCNQCKYSAAQKCTLDRHM 54
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
+R + C CDY + + H+ + HTGEKPY CG+C +R+A+ A L H++
Sbjct: 82 VRKHTGEKPYKCDQCDYSAARKVHLDGHVTSKHTGEKPYMCGECGYRTANRASLTVHMR 140
Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + N + H+RTHTG KPY C QC + + + L+ H+
Sbjct: 120 YMCGECGYRTANRASLTVHMRTHTGVKPYKCDQCEYSTGRKSNLNRHM 167
Score = 43.1 bits (100), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C Y + N + H+R HTGEKPY C QC + +A L H+
Sbjct: 63 FMCDECGYRTTNRFNLSMHVRKHTGEKPYKCDQCDYSAARKVHLDGHV 110
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C+Y + + H+ H GEKP+ CG+C +R+A+ L H++
Sbjct: 148 YKCDQCEYSTGRKSNLNRHMANHKGEKPFMCGECGYRTANRYDLSRHMR 196
Score = 36.2 bits (82), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C Y + + H+ THTGEK + C +C +R+ + L H++K
Sbjct: 35 YKCNQCKYSAAQKCTLDRHMATHTGEKSFMCDECGYRTTNRFNLSMHVRK 84
>gi|327266586|ref|XP_003218085.1| PREDICTED: zinc finger protein 729-like [Anolis carolinensis]
Length = 1693
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 131 HC-----RTCKSMI--RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
HC + CK +I R + FVC C G + +H+R HTGEKPY CG C
Sbjct: 505 HCGKSFPKRCKLVIHERIHTGENPFVCPECGKGFNQKGNLMTHMRLHTGEKPYKCGYCGK 564
Query: 184 RSASVAGLHYHLK 196
R + AGL H K
Sbjct: 565 RFSQKAGLSKHEK 577
Score = 41.2 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHL---KKTYH 200
+ C C N G R H RTHTGE+PY C +C +F + +H + +K YH
Sbjct: 861 YQCMQCGKSFSNRGSFRVHQRTHTGERPYKCAECGKSFNESGNLTVHQRIHTGEKPYH 918
Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 24/55 (43%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
RT + C+ C N G H+R HTGEKPY C QC + L H
Sbjct: 965 RTHTGEKPYKCHECGKSFINSGNFSKHLRFHTGEKPYKCMQCGKNFSGKGNLTSH 1019
Score = 37.4 bits (85), Expect = 3.3, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLH 192
+ C C+ + C H R+HTGE+PY C +C AF V LH
Sbjct: 1141 YKCTWCEMSFSDNACRIRHERSHTGERPYQCMKCGKAFGRTGVLALH 1187
Score = 37.4 bits (85), Expect = 3.7, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Query: 151 YACDYFSYNIG---CMRSHIRTHTGEKPYACGQCA 182
+ C Y + G +R H+RTHTGE+PY C C
Sbjct: 445 WRCSYCGRSFGRSSVLREHVRTHTGERPYKCLDCG 479
Score = 37.4 bits (85), Expect = 3.8, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 42/117 (35%), Gaps = 22/117 (18%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKS 137
C SQ SHL L T P+ C +C+ S N CR
Sbjct: 1118 CGKNFSQKSHLKLHKRIHTGE-----------KPYKCTWCEMSFSDNA------CRIRHE 1160
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA--FRSASVAGLH 192
R+ + C C G + H++THT EKPY C +C FR +H
Sbjct: 1161 --RSHTGERPYQCMKCGKAFGRTGVLALHLKTHTDEKPYKCMECGKDFREKGSLAVH 1215
Score = 37.0 bits (84), Expect = 4.5, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAG 190
RT + C C + H+RTHTGEKPY C +C ++ SV+G
Sbjct: 1217 RTHTGEKPYKCMECGKTFSRSEHLNIHVRTHTGEKPYKCMECG-KNFSVSG 1266
Score = 37.0 bits (84), Expect = 4.7, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 27/58 (46%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++T + C C G + H RTHTGEKPY C +C + L+ H++
Sbjct: 1188 LKTHTDEKPYKCMECGKDFREKGSLAVHQRTHTGEKPYKCMECGKTFSRSEHLNIHVR 1245
>gi|296480719|tpg|DAA22834.1| TPA: zinc finger protein 406-like [Bos taurus]
Length = 1519
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 549 FTCEYCNKVFKFKHSLQAHLRIHTKEKPYKCSQCSYASAIKANLNVHLRK 598
Score = 40.0 bits (92), Expect = 0.52, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 551 CEYC--------NKVFKFKHSLQAHLRIHTKEKPYKCSQCSYASAIKANLNVHLRKHTGE 602
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 603 K-FACDCCSFTCLSKGHLKVHVERVH 627
Score = 37.7 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 46/117 (39%), Gaps = 24/117 (20%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 1187 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 1237
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+F C CDY + + H+ H KP+ C C + S +++G LK+ Y+
Sbjct: 1238 DGKQFKCTVCDYTAAQKPQLLRHMEQHASFKPFRCAHCHY-SCNISG---SLKRHYN 1290
Score = 37.4 bits (85), Expect = 3.7, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 1158 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 1206
>gi|260823048|ref|XP_002603995.1| hypothetical protein BRAFLDRAFT_71716 [Branchiostoma floridae]
gi|229289320|gb|EEN60006.1| hypothetical protein BRAFLDRAFT_71716 [Branchiostoma floridae]
Length = 575
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+RTHTGEKPY C QC + +A + L+ HL+
Sbjct: 224 YICEECGYQTAKKSDLSRHMRTHTGEKPYKCDQCDYSAARKSSLNEHLQ 272
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+RTHTGEKPY C QC + +A + L+ HL+
Sbjct: 517 YICEECGYQTAKKSDLSRHMRTHTGEKPYKCDQCDYSAARKSSLNEHLQ 565
Score = 39.7 bits (91), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTG--EKPYACGQCAFRSASVAGLHYHLK 196
+C CDY + + H+R HTG E+PY CG C +R+A L H++
Sbjct: 432 MCDRCDYSAAEKLTLDIHLRKHTGTGERPYMCGDCGYRTAHKHQLSRHMR 481
Score = 39.3 bits (90), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTG--EKPYACGQCAFRSASVAGLHYHLK 196
+C CDY + + H+R HTG E+PY CG C +R+A L H++
Sbjct: 139 MCDRCDYSAAEKLTLDIHLRKHTGTGERPYMCGDCGYRTAHKHQLSRHIR 188
Score = 35.8 bits (81), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
+RT + C CDY + + H++ H+GEKPY C F
Sbjct: 243 MRTHTGEKPYKCDQCDYSAARKSSLNEHLQVHSGEKPYMCDMAEF 287
>gi|260802183|ref|XP_002595972.1| hypothetical protein BRAFLDRAFT_60973 [Branchiostoma floridae]
gi|229281225|gb|EEN51984.1| hypothetical protein BRAFLDRAFT_60973 [Branchiostoma floridae]
Length = 565
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + G + H+ HTGEKPY CG C +R+A A L H++K
Sbjct: 179 YKCDQCDYSAVRKGHLDKHLANHTGEKPYKCGVCGYRTAYKAHLLRHMRK 228
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C CDY + + H+ HTGEKPY CG C +R+A A L H+ K
Sbjct: 319 FKCDQCDYSAVRKIYLDKHLANHTGEKPYKCGVCGYRTAYKAHLLRHMSK 368
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 151 YACDYFSYNIGCMR---SHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
Y CD +Y+ R +HI HTGEKPY CG+C +R+A L H+K
Sbjct: 10 YKCDQCNYSTVWKRYLDTHIANHTGEKPYMCGECGYRTAYRTNLSRHMK 58
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+F C +CD+ + + ++ H+ H+ EK Y CG+C FR+A L H+KK
Sbjct: 446 RFNCDSCDFSTCSKTNLKQHMGKHSVEKSYLCGECGFRTAFRPSLSRHMKK 496
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
FVC C Y + + + H++ H+GE PY C C F ++ + L H+ K
Sbjct: 263 FVCELCGYGTESKAHLSRHMKKHSGENPYCCDHCDFSTSWKSSLDQHMAK 312
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C+ CDYF+ + H+ H EKP+ C C + + S A L H+KK
Sbjct: 235 YKCHQCDYFAAEKIYLDKHLVKHADEKPFVCELCGYGTESKAHLSRHMKK 284
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 148 FVCYACDYF-SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CD+ S+ I R H+ HTGEKPY C QC + + + L HL K
Sbjct: 66 YRCKQCDFSTSWQINLQR-HMAQHTGEKPYKCDQCDYSAIQKSNLDKHLVK 115
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 21/36 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
FVC C Y + + + H+R HTGEKPY C C F
Sbjct: 122 FVCELCGYGTAHKTHLARHMRKHTGEKPYCCDHCDF 157
Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + H+ HTGEKP+ C C + +A L H++K
Sbjct: 94 YKCDQCDYSAIQKSNLDKHLVKHTGEKPFVCELCGYGTAHKTHLARHMRK 143
>gi|338727218|ref|XP_001492010.3| PREDICTED: zinc finger protein 91-like [Equus caballus]
Length = 1142
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 30/57 (52%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RT P + C C ++ H+RTHTGEKPYAC +C +GL YH+K
Sbjct: 452 RTHPGEKPYKCKECGKSFNRSFHLKVHMRTHTGEKPYACKECGKAFTDSSGLFYHIK 508
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 26/57 (45%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RT F C C + H+RTHTGEKPY C +C +GL H+K
Sbjct: 648 RTHNGEKPFKCEECGKGFKRFVHLNIHMRTHTGEKPYECKECGKAFTQSSGLTEHIK 704
Score = 36.6 bits (83), Expect = 5.8, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHY 193
F C C + HI+THTGEKP+ C C AF +AS H+
Sbjct: 572 FKCEKCGKAFTQSSGLTVHIKTHTGEKPFKCDTCGKAFPTASHLTTHF 619
Score = 36.2 bits (82), Expect = 7.5, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 26/57 (45%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RT + F C C + + H R HTGEKP+ C +C +GL H+K
Sbjct: 536 RTHTGQKSFECNICGKTFASSSYVIVHKRIHTGEKPFKCEKCGKAFTQSSGLTVHIK 592
>gi|390462756|ref|XP_003732899.1| PREDICTED: transcriptional repressor CTCFL [Callithrix jacchus]
Length = 570
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H +T K+ R F C C Y M +HIRTHTGE
Sbjct: 457 CRYCSAVFHERFA-LIQHQKTHKNEKR-------FKCEHCSYACKQARHMTAHIRTHTGE 508
Query: 174 KPYACGQCA--FRSASVAGLHYHLKKTYH 200
KP+ C C FR + +H+ + YH
Sbjct: 509 KPFTCLSCNKCFRQKQLLKIHF---RKYH 534
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 321 TSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 380
Query: 190 GLHYHLK 196
L H++
Sbjct: 381 KLKRHMR 387
Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +R+ F C C Y S + ++ H+RTH+GEKPY C C R + H
Sbjct: 355 KRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEKPYECHVCHARFTQSGTMKMHT 414
Query: 196 KKTY 199
++ +
Sbjct: 415 QQKH 418
>gi|260823160|ref|XP_002604051.1| hypothetical protein BRAFLDRAFT_208131 [Branchiostoma floridae]
gi|229289376|gb|EEN60062.1| hypothetical protein BRAFLDRAFT_208131 [Branchiostoma floridae]
Length = 345
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + G + H+ HTGEKPY CG+C +R+A L H++
Sbjct: 65 YKCGQCDYSTTRKGHLDQHLMKHTGEKPYMCGECGYRTAKKCNLSLHMR 113
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CD+ + + H+ HTGEKP+ CG+C +R+A + L H++
Sbjct: 9 FKCNQCDFSAAQKSILDKHLVKHTGEKPFMCGECGYRAAQKSDLSKHMR 57
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHI-RTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CDY + + + HI R H+ EKPY CG+C +R+A + L H++
Sbjct: 281 MRTHTGEKPFKCDQCDYSAISKSYLNRHISRQHSDEKPYMCGECGYRTAQKSHLARHMR 339
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + H+R HTG KPY CGQC + + L HL K
Sbjct: 37 FMCGECGYRAAQKSDLSKHMRIHTGNKPYKCGQCDYSTTRKGHLDQHLMK 86
Score = 42.7 bits (99), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 33/52 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
++C C+Y + + + H+RTHTGEKP+ C QC + + S + L+ H+ + +
Sbjct: 262 YMCGECEYRTVHKSHLSRHMRTHTGEKPFKCDQCDYSAISKSYLNRHISRQH 313
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGEKPY C QC + ++ + L H+
Sbjct: 149 YMCDECGYRTVKKSRLSLHMRTHTGEKPYKCDQCDYSASQKSNLDNHI 196
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
S +RT F C CDY + + H HTGE PY CG+C +R+ + L H++
Sbjct: 223 SHMRTHTGEKPFKCDQCDYSAAQKCYLDQHKTKHTGEYPYMCGECEYRTVHKSHLSRHMR 282
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + SH+RTHTGEKP+ C QC + +A L H K
Sbjct: 206 YMCGECGYGTTYSSTFSSHMRTHTGEKPFKCDQCDYSAAQKCYLDQHKTK 255
Score = 40.0 bits (92), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTG+KPY C QC F + + L HL K
Sbjct: 93 YMCGECGYRTAKKCNLSLHMRTHTGDKPYKCDQCDFSAIRKSTLDQHLVK 142
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CD+ + + H+ HTG+KPY C +C +R+ + L H++
Sbjct: 112 MRTHTGDKPYKCDQCDFSAIRKSTLDQHLVKHTGDKPYMCDECGYRTVKKSRLSLHMR 169
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + +HI HTGEKPY CG+C + + + H++
Sbjct: 168 MRTHTGEKPYKCDQCDYSASQKSNLDNHIAAKHTGEKPYMCGECGYGTTYSSTFSSHMR 226
>gi|260835606|ref|XP_002612799.1| hypothetical protein BRAFLDRAFT_233073 [Branchiostoma floridae]
gi|229298179|gb|EEN68808.1| hypothetical protein BRAFLDRAFT_233073 [Branchiostoma floridae]
Length = 228
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 17/100 (17%)
Query: 107 NNTFSPFCIYCKAVLSTNLNELIEHCRTCK-SMIRTDPFR-HK--------FVCYACDYF 156
NN FS + T+ E C C S R P HK + C C Y
Sbjct: 13 NNNFS-------VHMRTHTGEKPYRCDRCDYSAARKPPLEEHKGKHSVEKPYKCGECSYK 65
Query: 157 SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ + H++THTGEKPY CG+C +R+A A L H++
Sbjct: 66 TAQKHHLSRHMKTHTGEKPYMCGECGYRTAQKANLSQHMR 105
Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 151 YACDYFSYNIGCMRSHIR----THTGEKPYACGQCAFRSASVAGLHYHLK 196
Y CD F Y+ + IR HTGEKPY CG+C +R+A + + H+K
Sbjct: 170 YKCDQFDYSSAMKSNLIRHIEAKHTGEKPYMCGECGYRTACKSAIPKHMK 219
Score = 42.7 bits (99), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
++T ++C C Y + + H+RTHTGEKPY C QC + +A
Sbjct: 76 MKTHTGEKPYMCGECGYRTAQKANLSQHMRTHTGEKPYKCDQCDYSAA 123
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 24/50 (48%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C + H+RTHTGEKPY C +C + +A L H K
Sbjct: 1 FTCEECGGSTARNNNFSVHMRTHTGEKPYRCDRCDYSAARKPPLEEHKGK 50
Score = 36.2 bits (82), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C Y + + +H++THTG+KPY C Q + SA + L H++
Sbjct: 142 YSCVECGYRTAQKSNLYNHVKTHTGQKPYKCDQFDYSSAMKSNLIRHIE 190
>gi|390338003|ref|XP_003724698.1| PREDICTED: zinc finger protein 226-like [Strongylocentrotus
purpuratus]
Length = 631
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 28/52 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+ C CDY S G + HIRTHT EKP+ C +C F S L HL+ Y
Sbjct: 271 YKCDLCDYSSSQKGHLNVHIRTHTKEKPFKCPKCPFASTVPKSLREHLQMHY 322
Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 124 NLNELIEHCRTCKSMIRTDPFRHK-FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
+ N + E + K ++++ + + F C CDY + + H+ HTG KPY C C
Sbjct: 218 DGNYISEQLASLKEQMKSEEEKMQLFSCNQCDYVTKRKHNLIQHLAVHTGAKPYKCDLCD 277
Query: 183 FRSASVAGLHYHLK 196
+ S+ L+ H++
Sbjct: 278 YSSSQKGHLNVHIR 291
Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
IRT F C C + S +R H++ H G++P C C+F S+ + H+
Sbjct: 290 IRTHTKEKPFKCPKCPFASTVPKSLREHLQMHYGQRPLKCPYCSFSSSQAFSIKRHI 346
Score = 36.6 bits (83), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 11/85 (12%)
Query: 112 PFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHT 171
P+C++C S + + H PFR C C Y + G + H++ H
Sbjct: 133 PYCVFCSPYYSAVASHTLIH-------TGEKPFR----CKICGYRARQRGHVVVHMQMHE 181
Query: 172 GEKPYACGQCAFRSASVAGLHYHLK 196
+KPY C +C + + + L H++
Sbjct: 182 EQKPYICVKCDYSTTQPSHLRVHMR 206
>gi|338719413|ref|XP_001489795.3| PREDICTED: transcriptional repressor CTCFL [Equus caballus]
Length = 655
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S + HIR+HTGE+P+ CG C++ S
Sbjct: 330 TSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLTRHIRSHTGERPFQCGLCSYASKDTY 389
Query: 190 GLHYHLK 196
L H++
Sbjct: 390 KLKRHVR 396
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C +C AV LI+H +T K+ +F C C Y + H RTHTGE
Sbjct: 466 CRHCSAVFHERY-ALIQHQKTHKN-------EKRFQCKHCSYSCKQERHLTVHTRTHTGE 517
Query: 174 KPYACGQC--AFRSASVAGLHY 193
KP+AC C FR + +H+
Sbjct: 518 KPFACLSCNKCFRQKQLLNVHF 539
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 9/85 (10%)
Query: 112 PF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
PF C CK S ++L H IR+ F C C Y S + ++ H+RTH
Sbjct: 347 PFKCSMCKYA-SVEASKLTRH-------IRSHTGERPFQCGLCSYASKDTYKLKRHVRTH 398
Query: 171 TGEKPYACGQCAFRSASVAGLHYHL 195
+GEKPY C C R + H+
Sbjct: 399 SGEKPYECHVCHARFTQSGTMKTHV 423
Score = 39.7 bits (91), Expect = 0.68, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKTY 199
C+ C ++ +R+H+ THTG KPY CG C AF ++ H K T+
Sbjct: 293 CHLCLKAFRSVTLLRNHVNTHTGTKPYKCGDCDMAFVTSGELVRHRRYKHTH 344
Score = 37.4 bits (85), Expect = 3.4, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 10/62 (16%)
Query: 141 TDPFRHK--------FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAG 190
T P HK F C C + S I H +TH+ EKP+ C C AFRS ++
Sbjct: 248 TSPKDHKKAKGGERTFQCDVCGFTSSRISSFNRHKKTHSNEKPHTCHLCLKAFRSVTLLR 307
Query: 191 LH 192
H
Sbjct: 308 NH 309
>gi|157786720|ref|NP_001099221.1| zinc finger protein 40 [Rattus norvegicus]
gi|149045121|gb|EDL98207.1| human immunodeficiency virus type I enhancer binding protein 1
[Rattus norvegicus]
Length = 2682
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 112 PFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH--KFVCYACDYFSYNIGCMRSHIRT 169
P IY +++ +++ +E + C ++R + K++C C+ + HIR+
Sbjct: 371 PGPIYSSTHVASVVSQSVE--QMCNLLLRDQKPKKQGKYICEYCNRACAKPSVLLKHIRS 428
Query: 170 HTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
HTGE+PY C C F + + L+ H K H
Sbjct: 429 HTGERPYPCVTCGFSFKTKSNLYKHKKSHAH 459
Score = 45.1 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 2061 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 2116
>gi|260795683|ref|XP_002592834.1| hypothetical protein BRAFLDRAFT_57048 [Branchiostoma floridae]
gi|229278058|gb|EEN48845.1| hypothetical protein BRAFLDRAFT_57048 [Branchiostoma floridae]
Length = 235
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 19/120 (15%)
Query: 79 CKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
C+ C Q S L DL H +T + P+ C C + S L+ L +H
Sbjct: 96 CEECSRQFSQLSDLKRHVRT---------HTGEKPYTCEECSSQFS-QLDHLKKH----- 140
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C +G +++H+RTHTGEKPY C +C+ + + + L H++
Sbjct: 141 --MRTHTGEKPYKCEECSRHFSQLGNLKTHMRTHTGEKPYRCEECSRQFSQLGDLKKHMR 198
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 17/133 (12%)
Query: 79 CKHCHSQLSHL-DLLDHCKTCSYMIRP----NANNTFSPFCIYCKAVLSTNLNELIEHCR 133
C+ C Q S L DL H +T + +P + FS F + K+ + T+ E C
Sbjct: 12 CEECSKQFSQLRDLKKHIQTHTGQ-KPYYCEECSKQFSRF-HHLKSHMRTHTGEKSYRCE 69
Query: 134 TC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
C K+ +RT + C C + ++ H+RTHTGEKPY C +C+
Sbjct: 70 ECSRQFGLFHHLKTHMRTHTGEKPYRCEECSRQFSQLSDLKRHVRTHTGEKPYTCEECSS 129
Query: 184 RSASVAGLHYHLK 196
+ + + L H++
Sbjct: 130 QFSQLDHLKKHMR 142
>gi|260815953|ref|XP_002602737.1| hypothetical protein BRAFLDRAFT_195434 [Branchiostoma floridae]
gi|229288048|gb|EEN58749.1| hypothetical protein BRAFLDRAFT_195434 [Branchiostoma floridae]
Length = 338
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT R + C CDY + + + H+ H+GEKPY CG+C +R+A + L H++
Sbjct: 58 MRTHTGRKPYKCDQCDYSAAHKLSLDQHLARHSGEKPYMCGECGYRTAQKSDLSRHMR 115
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTG+KPY C QC + +A + L HL K
Sbjct: 95 YMCGECGYRTAQKSDLSRHMRTHTGDKPYKCDQCDYSTARKSSLDRHLAK 144
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KPY CG+C +R+ + L H++
Sbjct: 2 MRTHTGERPYKCDKCDYSAAAKSTLDRHLAKHTGDKPYMCGECGYRATQKSHLSVHMR 59
Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C+Y + + H+ HTGEKPY CG+C +R+A + H+K
Sbjct: 208 YKCDQCNYSATRKSTLNDHLLKHTGEKPYMCGECGYRTAERRYFYRHMK 256
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTG KPY C QC + +A L HL
Sbjct: 39 YMCGECGYRATQKSHLSVHMRTHTGRKPYKCDQCDYSAAHKLSLDQHL 86
Score = 39.3 bits (90), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
H+RTHTGE+PY C +C + +A+ + L HL K
Sbjct: 1 HMRTHTGERPYKCDKCDYSAAAKSTLDRHLAK 32
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
F+C C Y + H+RTHTG KPY C QC + +A + L H
Sbjct: 292 FMCGECGYRTTQKSASSIHMRTHTGIKPYKCDQCNYSAARKSHLDIH 338
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTG+KP+ CG+C +R+ + H++
Sbjct: 264 YKCDQCDYSAGLKQLLDRHLAKHTGKKPFMCGECGYRTTQKSASSIHMR 312
>gi|195399656|ref|XP_002058435.1| suppressor of hairy wing [Drosophila virilis]
gi|194141995|gb|EDW58403.1| suppressor of hairy wing [Drosophila virilis]
Length = 900
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 22/153 (14%)
Query: 58 ILNLNLSVLLVTTIPTQNHSL------CKHCHSQLS---HLDLLDHCKTCSYMIRPNANN 108
I N L + + Q H L CK C + HL +CS N N+
Sbjct: 322 ICNAKLRSGALLKLHEQQHQLRGKPFACKICGKDFTRSYHLKRHQKYSSCS----ANEND 377
Query: 109 TFSPFCIYCKAVLSTNLNELIEHCRT-CKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHI 167
T S C C V L+ L H + + + P +++C+ C Y++ + HI
Sbjct: 378 TMS--CKVCDRVF-YRLDNLRAHLKQHLGTQVVKKP---EYMCHVCKNCFYSLSTLNIHI 431
Query: 168 RTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
RTHTGEKP+ C C + +++ L H + YH
Sbjct: 432 RTHTGEKPFDCDLCDKKFSALVALKKH--RRYH 462
>gi|301606217|ref|XP_002932722.1| PREDICTED: ras-responsive element-binding protein 1 [Xenopus
(Silurana) tropicalis]
Length = 1680
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 15/97 (15%)
Query: 118 KAVLSTN-----LNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGC 162
KA++S N ++ CR C ++ IRT + C CDY + +
Sbjct: 709 KAIISNNKKTTQAKKVFYPCRFCDQVFTFSGLLRAHIRTHLGISPYQCNICDYIAADKAA 768
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+ H+RTH+GE+PY C C + A HL+K +
Sbjct: 769 LIRHLRTHSGERPYVCKICQYPFTVKANCERHLRKKH 805
Score = 37.4 bits (85), Expect = 3.1, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
+ K +C C +++ + H+R+HTGE+PY C C
Sbjct: 1567 KRKKICTVCSKRFWSLQDLTRHMRSHTGERPYKCQTC 1603
>gi|260782884|ref|XP_002586510.1| hypothetical protein BRAFLDRAFT_106413 [Branchiostoma floridae]
gi|229271625|gb|EEN42521.1| hypothetical protein BRAFLDRAFT_106413 [Branchiostoma floridae]
Length = 735
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + SH+R HTG+KP+ CG+C +R+ + L H++
Sbjct: 529 MRTHTGEKPYKCDQCDYSAAQKSTLDSHLRKHTGDKPFMCGECGYRAVQKSALSIHMR 586
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + H+RTHTGEKPY C QC + +A + L HL+K
Sbjct: 510 FMCGQCGYRTVVRSHLSRHMRTHTGEKPYKCDQCDYSAAQKSTLDSHLRK 559
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C CDY + + + +H+ HTGEKPY CG+C +R+ + L H+++
Sbjct: 641 MRTHTGERPYKCDQCDYSAAHKSNLDNHLLKHTGEKPYMCGECGYRTTRKSHLSLHMRR 699
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + SH+ HTGEKPY CG+C +R A + L H++
Sbjct: 172 YKCDQCDYSAARKSNLDSHLLKHTGEKPYMCGECGYRMAHKSQLTKHMR 220
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + SH+ HTG++P+ CG+C +R+A + L H++
Sbjct: 585 MRTHTGEKPYKCDHCDYSASEKATLNSHVAKHTGDEPFMCGECGYRTAVKSRLSMHMR 642
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + H+RTHTGEKPY C C + ++ A L+ H+ K
Sbjct: 566 FMCGECGYRAVQKSALSIHMRTHTGEKPYKCDHCDYSASEKATLNSHVAK 615
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C Y + + H+RTHTGE+PY C QC + +A + L HL
Sbjct: 622 FMCGECGYRTAVKSRLSMHMRTHTGERPYKCDQCDYSAAHKSNLDNHL 669
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CD + ++SH+ H G+KPY CG+C FR+ L H+K
Sbjct: 284 YKCDQCDCSAAQKSTLKSHLLKHAGDKPYMCGECGFRTTQRRHLSRHMK 332
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + SH+ HTG+KPY CG+C +R+ L H+++
Sbjct: 228 YKCDHCDYSAALKSSLDSHLLKHTGDKPYMCGECGYRATRRFYLSQHMRR 277
Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F+C C + + + + H+RTHT EKPY CG+C +++ L H++
Sbjct: 56 FMCEECGFRTGHRRHLSRHMRTHTAEKPYMCGECEYKTIQKCDLSRHMR 104
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT ++C C+Y + + H+RTHTGE Y CGQC + +A L HL
Sbjct: 75 MRTHTAEKPYMCGECEYKTIQKCDLSRHMRTHTGENLYMCGQCDYSAAQKCTLESHL 131
Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HTGEKPY C QC + + + L HL K
Sbjct: 678 YMCGECGYRTTRKSHLSLHMRRHTGEKPYRCDQCDYSATKKSTLKNHLAK 727
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+R HTGEKPY C C + +A + L HL
Sbjct: 200 YMCGECGYRMAHKSQLTKHMRAHTGEKPYKCDHCDYSAALKSSLDSHL 247
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+R HTGEKPY C QC +A + L HL
Sbjct: 256 YMCGECGYRATRRFYLSQHMRRHTGEKPYKCDQCDCSAAQKSTLKSHL 303
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+ THTGEKPY C QC F +A L H K
Sbjct: 399 YMCGECGYRALFHSTLSKHMMTHTGEKPYKCDQCDFSAAQKYHLDNHRAK 448
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C Y + + H+ HTGEKPY C QC + +A + L HL
Sbjct: 144 FMCGECGYRTPYKRYLSRHMLVHTGEKPYKCDQCDYSAARKSNLDSHL 191
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H HTGEK + CGQC +R+ + L H++
Sbjct: 482 YKCDQCDYSAAQKSTLNDHRTKHTGEKLFMCGQCGYRTVVRSHLSRHMR 530
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + SH+ H+ EKP+ C +C FR+ L H++
Sbjct: 28 YKCDQCDYSAAQKSNLDSHLANHSDEKPFMCEECGFRTGHRRHLSRHMR 76
Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+C C + + + H+RTHTG KPY C QC + +A + L HL
Sbjct: 1 MCGECGHRTTQQSALAIHMRTHTGIKPYKCDQCDYSAAQKSNLDSHL 47
>gi|148697447|gb|EDL29394.1| zinc finger protein 406, isoform CRA_a [Mus musculus]
Length = 1289
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 323 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCSQCSYASAIKANLNVHLRK 372
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 325 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCSQCSYASAIKANLNVHLRKHTGE 376
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 377 K-FACDYCSFTCLSKGHLKVHIERVH 401
Score = 37.0 bits (84), Expect = 4.6, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 958 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTS 1008
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 1009 DGKQFKCTVCDYTAAQKPQLLRHMEQHASFKPFRCAHCHYSCNISGSLKRHYNRKH 1064
Score = 37.0 bits (84), Expect = 5.1, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 929 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 977
>gi|242019398|ref|XP_002430148.1| zinc finger protein, putative [Pediculus humanus corporis]
gi|212515239|gb|EEB17410.1| zinc finger protein, putative [Pediculus humanus corporis]
Length = 481
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++ C CDY S + G + H+R H GE+P+ C C++R+ + L HL+
Sbjct: 156 RYKCTKCDYASVDSGSLIKHLRVHNGERPFKCQLCSYRARDSSQLTVHLR 205
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 8/69 (11%)
Query: 136 KSMIRTDPFRHK--------FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSAS 187
K+++R D RH F CY CD + H R H G+K Y C +C + S
Sbjct: 109 KTLLRKDIERHSRVHTGERPFKCYLCDKAFNRTDKLLLHQRIHAGDKRYKCTKCDYASVD 168
Query: 188 VAGLHYHLK 196
L HL+
Sbjct: 169 SGSLIKHLR 177
>gi|363732527|ref|XP_419998.3| PREDICTED: zinc finger protein 513 [Gallus gallus]
Length = 452
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 41/93 (44%)
Query: 104 PNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCM 163
P P + C+ L + C C R + C C + S+ +
Sbjct: 37 PEEGGEPGPAALPCRQCGLQLAASLGQSCLQCAGTEGGRNQRIVYTCQLCPFASHYSSHL 96
Query: 164 RSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ H++TH GEKP+AC QCA+ SA + L HL+
Sbjct: 97 KRHMKTHNGEKPFACPQCAYASAQLVNLTRHLR 129
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 10/93 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCM 163
C+ C ++ C+ C K ++T F C C Y S + +
Sbjct: 65 CLQCAGTEGGRNQRIVYTCQLCPFASHYSSHLKRHMKTHNGEKPFACPQCAYASAQLVNL 124
Query: 164 RSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
H+RTHTGEKPY C C+F +S+ L H +
Sbjct: 125 TRHLRTHTGEKPYRCTGCSFACSSLGNLKRHER 157
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++T F C C Y S ++ ++ H R HTGEKPY C C + ++A L H +
Sbjct: 310 MKTHSGEKPFACPLCPYASAHLDNLKRHQRVHTGEKPYKCQLCDYACGNLANLKRHGR 367
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 9/89 (10%)
Query: 108 NTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSH 166
N PF C C A S L L H RT P+R C C + ++G ++ H
Sbjct: 104 NGEKPFACPQC-AYASAQLVNLTRHLRT---HTGEKPYR----CTGCSFACSSLGNLKRH 155
Query: 167 IRTHTGEKPYACGQCAFRSASVAGLHYHL 195
R H+ +KP+ C C +R L H+
Sbjct: 156 ERVHSQDKPFQCAACDYRCNQSRNLKRHM 184
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C + ++ + H++TH+GEKP+AC C + SA + L H +
Sbjct: 291 FACSLCPFVTHYPNHLARHMKTHSGEKPFACPLCPYASAHLDNLKRHQR 339
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 11/84 (13%)
Query: 112 PFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHT 171
P C Y S +L+ L H R P++ C CDY N+ ++ H R H+
Sbjct: 322 PLCPY----ASAHLDNLKRHQRV---HTGEKPYK----CQLCDYACGNLANLKRHGRIHS 370
Query: 172 GEKPYACGQCAFRSASVAGLHYHL 195
G+KP+ C C++ L H+
Sbjct: 371 GDKPFQCSLCSYSCNQSMNLKRHM 394
>gi|301070254|gb|ADK55547.1| zinc finger protein 513, 3 prime [Zonotrichia albicollis]
Length = 447
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 41/93 (44%)
Query: 104 PNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCM 163
P P + C+ L + C C R + C C + S+ +
Sbjct: 32 PEEGGEPGPAALPCRQCGLQLAASLGQSCLQCAGAEGGRSQRIVYSCQLCPFASHYSSHL 91
Query: 164 RSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ H++TH GEKP+AC QCA+ SA + L HL+
Sbjct: 92 KRHMKTHNGEKPFACPQCAYASAQLVNLTRHLR 124
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 14/112 (12%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C+ C + + + C+ C ++ C+ C K ++T
Sbjct: 45 CRQCGLQLAASLGQS----CLQCAGAEGGRSQRIVYSCQLCPFASHYSSHLKRHMKTHNG 100
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C Y S + + H+RTHTGEKPY C C+F +S+ L H +
Sbjct: 101 EKPFACPQCAYASAQLVNLTRHLRTHTGEKPYRCTGCSFACSSLGNLKRHER 152
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++T F C C Y S ++ ++ H R HTGEKPY C C + ++A L H +
Sbjct: 305 MKTHSGEKPFACPLCPYASAHLDNLKRHQRVHTGEKPYKCQLCDYACGNLANLKRHGR 362
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 9/89 (10%)
Query: 108 NTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSH 166
N PF C C A S L L H RT P+R C C + ++G ++ H
Sbjct: 99 NGEKPFACPQC-AYASAQLVNLTRHLRT---HTGEKPYR----CTGCSFACSSLGNLKRH 150
Query: 167 IRTHTGEKPYACGQCAFRSASVAGLHYHL 195
R H+ +KP+ C C +R L H+
Sbjct: 151 ERVHSQDKPFQCAACDYRCNQSRNLKRHM 179
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C + ++ + H++TH+GEKP+AC C + SA + L H +
Sbjct: 286 FACSLCPFVTHYPNHLARHMKTHSGEKPFACPLCPYASAHLDNLKRHQR 334
Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 11/84 (13%)
Query: 112 PFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHT 171
P C Y S +L+ L H R P++ C CDY N+ ++ H R H+
Sbjct: 317 PLCPY----ASAHLDNLKRHQRV---HTGEKPYK----CQLCDYACGNLANLKRHGRIHS 365
Query: 172 GEKPYACGQCAFRSASVAGLHYHL 195
G+KP+ C C++ L H+
Sbjct: 366 GDKPFQCSLCSYSCNQSMNLKRHM 389
>gi|260808534|ref|XP_002599062.1| hypothetical protein BRAFLDRAFT_81722 [Branchiostoma floridae]
gi|229284338|gb|EEN55074.1| hypothetical protein BRAFLDRAFT_81722 [Branchiostoma floridae]
Length = 383
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+I+T + C CDY + + H+ HTG+KPY CG+C +R+A + L H++
Sbjct: 148 LIQTHTGEKPYKCDQCDYSATQTSALNQHLAKHTGDKPYMCGECGYRTAQKSHLSQHMR 206
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 119 AVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAC 178
+T + L EH +RT + C CDY + + + H+ HTG+KPY C
Sbjct: 304 GYRTTKKSHLAEH-------MRTHTGEKPYKCDQCDYSAAHKSTLNQHLARHTGDKPYMC 356
Query: 179 GQCAFRSASVAGLHYHLK 196
GQC +R+ + L H++
Sbjct: 357 GQCGYRTTWKSQLSKHMR 374
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A + L+ HL +
Sbjct: 298 YMCGECGYRTTKKSHLAEHMRTHTGEKPYKCDQCDYSAAHKSTLNQHLAR 347
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C Y + + H+RTHTGEKPY C QC + +A L HL K
Sbjct: 1 MCGECGYRTAQKSHLSRHMRTHTGEKPYKCDQCDYSAAHKNSLDQHLAK 49
Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTG+KPY C QC + +A + L HL
Sbjct: 186 YMCGECGYRTAQKSHLSQHMRTHTGDKPYKCNQCDYSAALKSTLDQHL 233
Score = 42.7 bits (99), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG KPY CG+C +R+A L H++
Sbjct: 205 MRTHTGDKPYKCNQCDYSAALKSTLDQHLAIHTGNKPYMCGECGYRTAQKYTLSRHMR 262
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTG+KPY C QC F +A L HL
Sbjct: 242 YMCGECGYRTAQKYTLSRHMRTHTGDKPYKCDQCDFSAAVKITLDRHL 289
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + H+ HTGEK Y C +C +R+A + L H++
Sbjct: 19 MRTHTGEKPYKCDQCDYSAAHKNSLDQHLAKHTGEKRYMCEECGYRTAHKSTLSRHMR 76
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPY--ACGQCAFRSASVAGLHYHLKK 197
+++C C Y + + + H+RTHTGEKPY C QC F + L HL K
Sbjct: 55 RYMCEECGYRTAHKSTLSRHMRTHTGEKPYNYKCDQCDFSTTRKYSLDQHLAK 107
Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C CD+ + + H+ HTG+KPY CG+C +R+A + H+
Sbjct: 86 YKCDQCDFSTTRKYSLDQHLAKHTGKKPYMCGECGYRTAKRSHFAEHM 133
Score = 39.3 bits (90), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CD+ + + H+ HTG+KPY CG+C +R+ + L H++
Sbjct: 261 MRTHTGDKPYKCDQCDFSAAVKITLDRHLAIHTGDKPYMCGECGYRTTKKSHLAEHMR 318
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 167 IRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
I+THTGEKPY C QC + + + L+ HL K
Sbjct: 149 IQTHTGEKPYKCDQCDYSATQTSALNQHLAK 179
>gi|260787821|ref|XP_002588950.1| hypothetical protein BRAFLDRAFT_59977 [Branchiostoma floridae]
gi|229274122|gb|EEN44961.1| hypothetical protein BRAFLDRAFT_59977 [Branchiostoma floridae]
Length = 202
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A L YHL K
Sbjct: 94 YMCGECGYRTARKHDLVQHMRTHTGEKPYKCDQCNYSTAKKGNLDYHLAK 143
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 126 NELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
++L++H +RT + C C+Y + G + H+ HTG+KPY CG+C +R+
Sbjct: 107 HDLVQH-------MRTHTGEKPYKCDQCNYSTAKKGNLDYHLAKHTGDKPYMCGECGYRT 159
Query: 186 ASVAGLHYHLK 196
A + L H +
Sbjct: 160 ARKSDLSRHKR 170
Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HT EKPY CG+C +R+A L H++
Sbjct: 57 MRTHTGNKPYKCDKCDYSAAQKSALNQHLVIHTSEKPYMCGECGYRTARKHDLVQHMR 114
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + HI H+G+KPY CG+C R+ + L H++
Sbjct: 10 YKCDQCDYSAALKSTLDVHIVKHSGDKPYMCGECGHRTTQKSALSIHMR 58
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 26/53 (49%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
++C C Y + + H RTHTGE PY C QC + L HL++ H
Sbjct: 150 YMCGECGYRTARKSDLSRHKRTHTGEIPYKCDQCDLSATKKDYLDRHLRQHRH 202
>gi|334314161|ref|XP_001376294.2| PREDICTED: zinc finger protein Pegasus [Monodelphis domestica]
Length = 419
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 84 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 135
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 136 KPYKCELCSFRCSDRSNLSHHRRRKH 161
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 78 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 130
>gi|111307825|gb|AAI21338.1| LOC733928 protein [Xenopus (Silurana) tropicalis]
Length = 222
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C Y S + +R HIRTHT EKPY C QC++ L H+++
Sbjct: 128 FKCKLCSYASIDASSLRRHIRTHTSEKPYKCQQCSYSCIQKKSLDLHVRR 177
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C+Y + + H+R HTGEKP+ C C++ S + L H++
Sbjct: 100 FQCQQCEYKTRLKASLIQHMRVHTGEKPFKCKLCSYASIDASSLRRHIR 148
>gi|427794923|gb|JAA62913.1| Putative zinc finger protein, partial [Rhipicephalus pulchellus]
Length = 290
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 38/86 (44%), Gaps = 9/86 (10%)
Query: 112 PF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
PF C +C T+ N L +H RT F C C +R H+R H
Sbjct: 167 PFPCPHCDRSFGTSTN-LRQH-------ERTHTGERPFACSECPRAFQTSSNLRQHLRIH 218
Query: 171 TGEKPYACGQCAFRSASVAGLHYHLK 196
TGE+P+AC +C R S A L H K
Sbjct: 219 TGERPFACPECGKRFGSSANLRQHRK 244
>gi|260791398|ref|XP_002590716.1| hypothetical protein BRAFLDRAFT_89522 [Branchiostoma floridae]
gi|229275912|gb|EEN46727.1| hypothetical protein BRAFLDRAFT_89522 [Branchiostoma floridae]
Length = 407
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + G + H+RTHTGEKPY C +C + +A + L H+ K
Sbjct: 10 YMCGECGYRAAGKGGLSQHMRTHTGEKPYKCDRCDYSAAQKSTLDRHVAK 59
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KPY CG+C +R+ + L H++
Sbjct: 29 MRTHTGEKPYKCDRCDYSAAQKSTLDRHVAKHTGDKPYMCGECGYRAVWKSHLSQHMR 86
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KPY CG+C +R+ + L H++
Sbjct: 85 MRTHTGEKPYKCDRCDYSAAQKSTLDRHVAKHTGDKPYMCGECGYRAVWKSHLSQHMR 142
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KPY CG+C +R+ + L H++
Sbjct: 141 MRTHTGEKPYKCDRCDYSAAQKSTLDRHVAKHTGDKPYMCGECGYRAVWKSHLSQHMR 198
Score = 43.1 bits (100), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C +C + +A + L H+ K
Sbjct: 66 YMCGECGYRAVWKSHLSQHMRTHTGEKPYKCDRCDYSAAQKSTLDRHVAK 115
Score = 43.1 bits (100), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C +C + +A + L H+ K
Sbjct: 122 YMCGECGYRAVWKSHLSQHMRTHTGEKPYKCDRCDYSAAQKSTLDRHVAK 171
Score = 43.1 bits (100), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C +C + +A + L H+ K
Sbjct: 178 YMCGECGYRAVWKSHLSQHMRTHTGEKPYKCDRCDYSAAQKSTLDRHVAK 227
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 167 IRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++THT +KPY CG+C +R+A GL H++
Sbjct: 1 MKTHTEDKPYMCGECGYRAAGKGGLSQHMR 30
Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
+RT + C CDY + + H+ HTG+KPY CG+ +S
Sbjct: 197 MRTHTGEKPYKCDRCDYSAAQKSTLDRHVAKHTGDKPYMCGEWQGQS 243
>gi|195355819|ref|XP_002044385.1| GM11229 [Drosophila sechellia]
gi|194130703|gb|EDW52746.1| GM11229 [Drosophila sechellia]
Length = 465
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
FVC +C Y N +R HIR+HTGE+P+ C C R S +GL H+
Sbjct: 352 FVCESCGYSCRNKETLRVHIRSHTGERPFGCQVCDKRFPSHSGLREHM 399
>gi|18858073|ref|NP_572449.1| CG2129 [Drosophila melanogaster]
gi|7290892|gb|AAF46333.1| CG2129 [Drosophila melanogaster]
gi|15292013|gb|AAK93275.1| LD35215p [Drosophila melanogaster]
gi|220942308|gb|ACL83697.1| CG2129-PA [synthetic construct]
gi|220952526|gb|ACL88806.1| CG2129-PA [synthetic construct]
Length = 465
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
FVC +C Y N +R HIR+HTGE+P+ C C R S +GL H+
Sbjct: 352 FVCESCGYSCRNKETLRVHIRSHTGERPFGCQVCDKRFPSHSGLREHM 399
>gi|387020001|gb|AFJ52118.1| Zinc finger protein Pegasus-like [Crotalus adamanteus]
Length = 419
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 84 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 135
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 136 KPYKCELCSFRCSDRSNLSHHRRRKH 161
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 78 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 130
>gi|260818930|ref|XP_002604635.1| hypothetical protein BRAFLDRAFT_92869 [Branchiostoma floridae]
gi|229289963|gb|EEN60646.1| hypothetical protein BRAFLDRAFT_92869 [Branchiostoma floridae]
Length = 479
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C+ C Y + N + H+++HTGEKPY C QC + + +GL YHLK
Sbjct: 278 YMCWECGYNTANRYNLSHHMKSHTGEKPYKCHQCDYSALYKSGLSYHLK 326
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C+ CDY + + H+ HTGEKPY CG+C +R+A + L H++
Sbjct: 193 FKCHQCDYSALYKSTLDYHLAKHTGEKPYICGECGYRTAKRSNLSQHMR 241
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R+HTGEKPY C QC + +A + L YHL K
Sbjct: 392 YMCEKCGYRTAQKSHLSEHMRSHTGEKPYKCDQCDYSAAHKSTLQYHLTK 441
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYH 194
KS P++ C+ CDY + + H++T H+GEKPY CG+C FR+A + L H
Sbjct: 298 KSHTGEKPYK----CHQCDYSALYKSGLSYHLKTKHSGEKPYMCGECGFRAAVKSSLSMH 353
Query: 195 LK 196
+K
Sbjct: 354 MK 355
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+R+ + C CDY + + ++ H+ HTGEKPY C +C +R+A + L H++
Sbjct: 411 MRSHTGEKPYKCDQCDYSAAHKSTLQYHLTKHTGEKPYMCEKCGYRTAQRSNLSQHMR 468
Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 148 FVCYACDY---FSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + N+G + H+ HTGEKPY C +C +R+A + L H++
Sbjct: 363 YKCDQCDYSTAWKANLG--KHHVAKHTGEKPYMCEKCGYRTAQKSHLSEHMR 412
Score = 40.0 bits (92), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + + H+RTHTGEKP+ C QC + + L H
Sbjct: 108 YICGECGYKTVGKSHLSKHMRTHTGEKPFKCNQCDYSATQKQHLDQH 154
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 8/57 (14%)
Query: 148 FVCYACDYF----SYNIGCMRSHIRT----HTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y SY +RSH R HTGEKPY CG+C +++ + L H++
Sbjct: 72 YMCRECGYKTVYKSYLSHHLRSHTREKTSKHTGEKPYICGECGYKTVGKSHLSKHMR 128
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + + H+R HT EKPY C C + +A + L +H
Sbjct: 221 YICGECGYRTAKRSNLSQHMRIHTAEKPYKCDHCDYSAAQKSNLDHH 267
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 167 IRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ HTGEKPY CG+C +R+A + L H++
Sbjct: 6 LGQHTGEKPYMCGECGYRAAQRSHLSQHMR 35
Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + + H+R HT E+PY C QC + +A + L H
Sbjct: 15 YMCGECGYRAAQRSHLSQHMRIHTAERPYNCDQCDYSAAQKSNLEQH 61
>gi|260823026|ref|XP_002603984.1| hypothetical protein BRAFLDRAFT_71728 [Branchiostoma floridae]
gi|229289309|gb|EEN59995.1| hypothetical protein BRAFLDRAFT_71728 [Branchiostoma floridae]
Length = 349
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY CG+C +R+A + L H+K
Sbjct: 89 MRTHTGDKPYKCDQCDYSAARKSSLDQHLANHTGEKPYMCGECEYRTAKKSHLSRHMK 146
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C+Y + + H++THTGE+PY C QC + +A L+ HL K
Sbjct: 126 YMCGECEYRTAKKSHLSRHMKTHTGERPYKCDQCDYSAAQKGELNKHLAK 175
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 10/85 (11%)
Query: 121 LSTNLNELIEHCRTC--KSMIRTDPFRH--------KFVCYACDYFSYNIGCMRSHIRTH 170
++T+ E C C ++ ++D RH + C CDY + + H+RTH
Sbjct: 33 MNTHTGEKPYKCGECEHRAAQKSDLSRHMRTHTKDRPYKCDQCDYSAAQKFDLSKHMRTH 92
Query: 171 TGEKPYACGQCAFRSASVAGLHYHL 195
TG+KPY C QC + +A + L HL
Sbjct: 93 TGDKPYKCDQCDYSAARKSSLDQHL 117
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 26/49 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + H R HTGEKPY CG C +R+A L H++
Sbjct: 210 YKCDQCDYSFAEKSKLGRHRRKHTGEKPYVCGDCGYRTAVKCNLSTHIR 258
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IR+ + C CD N + H+R HTGEKPY C +C +R A + L H++
Sbjct: 257 IRSHTGEKPYKCDQCDVSVANKSHLNRHLRKHTGEKPYMCWECGYRVAQNSDLSRHMR 314
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+ THTGEKPY CG+C R+A + L H++
Sbjct: 14 YMCGECGYRAARKYHLSLHMNTHTGEKPYKCGECEHRAAQKSDLSRHMR 62
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + G + H+ HTGEKPY C +C +R+ L H+K
Sbjct: 154 YKCDQCDYSAAQKGELNKHLAKHTGEKPYMCEECGYRAIRKYTLSLHMK 202
Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+VC C Y + + +HIR+HTGEKPY C QC A+ + L+ HL+K
Sbjct: 238 YVCGDCGYRTAVKCNLSTHIRSHTGEKPYKCDQCDVSVANKSHLNRHLRK 287
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H++THTGE PY C QC + A + L H +K
Sbjct: 182 YMCEECGYRAIRKYTLSLHMKTHTGENPYKCDQCDYSFAEKSKLGRHRRK 231
Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C++ + + H+RTHT ++PY C QC + +A L H++
Sbjct: 42 YKCGECEHRAAQKSDLSRHMRTHTKDRPYKCDQCDYSAAQKFDLSKHMR 90
>gi|260804287|ref|XP_002597020.1| hypothetical protein BRAFLDRAFT_76512 [Branchiostoma floridae]
gi|229282281|gb|EEN53032.1| hypothetical protein BRAFLDRAFT_76512 [Branchiostoma floridae]
Length = 556
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY S + SH+ HTGEKPY CG+C +R+ + L H++
Sbjct: 397 YKCGQCDYSSAQKSTLESHLLKHTGEKPYMCGECGYRTTKKSTLTQHMR 445
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++VC C Y + N + HIR HTGEKPY C QC + + A L HL
Sbjct: 59 RYVCVDCGYRTANKNDLSRHIRKHTGEKPYKCDQCDYSATLKANLERHL 107
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C+Y + + H+R HT EKPY CGQC + SA + L HL K
Sbjct: 369 YMCGECEYKATQKSDLSRHMRIHTSEKPYKCGQCDYSSAQKSTLESHLLK 418
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + + C CDY + + SH+ HTGEK Y CG+C +R+ + L H++
Sbjct: 219 MRTHTGENLYKCGQCDYSAAQKSTLESHLLKHTGEKSYMCGECGYRTTKKSTLTQHMR 276
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C+ C + N N+L H IR + C CDY + + H+ HTG+
Sbjct: 62 CVDC-GYRTANKNDLSRH-------IRKHTGEKPYKCDQCDYSATLKANLERHLLQHTGD 113
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
KPY CG+C R+ + L H++
Sbjct: 114 KPYMCGECGHRTTQQSALAIHMR 136
Score = 42.7 bits (99), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT ++C C+Y + + H+RTHTGE Y CGQC + +A + L HL K
Sbjct: 191 MRTHTAEKPYMCGECEYKTIQKCDLSRHMRTHTGENLYKCGQCDYSAAQKSTLESHLLK 249
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F+C C + + + + H+RTHT EKPY CG+C +++ L H++
Sbjct: 172 FMCEECGFRTAHRRHLSRHMRTHTAEKPYMCGECEYKTIQKCDLSRHMR 220
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+R+ + C CDY + + H+ HTG+KPY CG+C +++ + L H++
Sbjct: 332 MRSHTAEKPYKCDQCDYSAARKHHLDIHVAKHTGDKPYMCGECEYKATQKSDLSRHMR 389
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+RTHTG KPY C +C + +A + L HL+
Sbjct: 425 YMCGECGYRTTKKSTLTQHMRTHTGIKPYECDKCDYSAAHKSNLDRHLR 473
Score = 40.0 bits (92), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C + + + H+RTHTG KPY C QC + +A + L HL
Sbjct: 116 YMCGECGHRTTQQSALAIHMRTHTGIKPYKCDQCDYSAAQKSNLDSHL 163
Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + SH+ H+ EKP+ C +C FR+A L H++
Sbjct: 144 YKCDQCDYSAAQKSNLDSHLANHSDEKPFMCEECGFRTAHRRHLSRHMR 192
Score = 39.7 bits (91), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C + + + + H+R+HT EKPY C QC + +A L H+ K
Sbjct: 313 FMCGECGFRAAHRRHLSGHMRSHTAEKPYKCDQCDYSAARKHHLDIHVAK 362
Score = 39.7 bits (91), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C + + + + H+R+HT EKPY C QC + +A L H+ K
Sbjct: 482 FMCGECGFRAAHRRHLSGHMRSHTAEKPYKCDQCDYSAARKHHLDIHVAK 531
Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 150 CYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
C CDY + + + H+R H+ +KP+ CG+C FR+A L H++
Sbjct: 286 CDKCDYSAAHKSNLDRHLRAEHSDDKPFMCGECGFRAAHRRHLSGHMR 333
Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+R HTG KP+ C +C + +A + L HL+
Sbjct: 256 YMCGECGYRTTKKSTLTQHMRIHTGIKPHECDKCDYSAAHKSNLDRHLR 304
>gi|327267678|ref|XP_003218626.1| PREDICTED: zinc finger protein Pegasus-like isoform 1 [Anolis
carolinensis]
Length = 419
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 84 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 135
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 136 KPYKCELCSFRCSDRSNLSHHRRRKH 161
Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 78 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 130
>gi|440901954|gb|ELR52811.1| Zinc finger protein ZFAT, partial [Bos grunniens mutus]
Length = 1217
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 267 FTCEYCNKVFKFKHSLQAHLRIHTKEKPYKCSQCSYASAIKANLNVHLRK 316
Score = 39.7 bits (91), Expect = 0.62, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 269 CEYC--------NKVFKFKHSLQAHLRIHTKEKPYKCSQCSYASAIKANLNVHLRKHTGE 320
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 321 K-FACDCCSFTCLSKGHLKVHVERVH 345
Score = 37.4 bits (85), Expect = 3.4, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 46/117 (39%), Gaps = 24/117 (20%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 885 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 935
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+F C CDY + + H+ H KP+ C C + S +++G LK+ Y+
Sbjct: 936 DGKQFKCTVCDYTAAQKPQLLRHMEQHASFKPFRCAHCHY-SCNISG---SLKRHYN 988
Score = 37.0 bits (84), Expect = 4.4, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 856 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 904
>gi|358415324|ref|XP_600561.6| PREDICTED: zinc finger protein ZFAT [Bos taurus]
gi|359072223|ref|XP_002692648.2| PREDICTED: zinc finger protein ZFAT [Bos taurus]
Length = 1139
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 255 FTCEYCNKVFKFKHSLQAHLRIHTKEKPYKCSQCSYASAIKANLNVHLRK 304
Score = 39.7 bits (91), Expect = 0.61, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 257 CEYC--------NKVFKFKHSLQAHLRIHTKEKPYKCSQCSYASAIKANLNVHLRKHTGE 308
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 309 K-FACDCCSFTCLSKGHLKVHVERVH 333
Score = 37.4 bits (85), Expect = 3.4, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 46/117 (39%), Gaps = 24/117 (20%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 893 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 943
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+F C CDY + + H+ H KP+ C C + S +++G LK+ Y+
Sbjct: 944 DGKQFKCTVCDYTAAQKPQLLRHMEQHASFKPFRCAHCHY-SCNISG---SLKRHYN 996
Score = 37.0 bits (84), Expect = 4.4, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 864 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 912
>gi|354471520|ref|XP_003497990.1| PREDICTED: zinc finger protein 40 [Cricetulus griseus]
gi|344236788|gb|EGV92891.1| Zinc finger protein 40 [Cricetulus griseus]
Length = 2692
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 112 PFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH--KFVCYACDYFSYNIGCMRSHIRT 169
P IY +++ +++ +E + C ++R + K++C C+ + HIR+
Sbjct: 371 PGPIYSSTHVASVVSQSVE--QMCNLLLRDQKPKKQGKYICEYCNRACAKPSVLLKHIRS 428
Query: 170 HTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
HTGE+PY C C F + + L+ H K H
Sbjct: 429 HTGERPYPCVTCGFSFKTKSNLYKHKKSHAH 459
Score = 44.7 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 2069 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 2124
>gi|338728480|ref|XP_001498937.3| PREDICTED: zinc finger protein ZFAT [Equus caballus]
Length = 1143
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 259 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCSQCSYASAIKANLNVHLRK 308
Score = 40.4 bits (93), Expect = 0.45, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 261 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCSQCSYASAIKANLNVHLRKHTGE 312
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 313 K-FACDYCSFTCLSKGHLKVHIERVH 337
Score = 36.6 bits (83), Expect = 5.2, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 897 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 947
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 948 DGKQFKCTVCDYTAAQKPQLLRHMEQHASFKPFRCAHCHYSCNISGSLKRHYNRKH 1003
Score = 36.6 bits (83), Expect = 5.7, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 868 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 916
>gi|224053131|ref|XP_002192246.1| PREDICTED: zinc finger protein Pegasus [Taeniopygia guttata]
Length = 419
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 84 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 135
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 136 KPYKCELCSFRCSDRSNLSHHRRRKH 161
Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 78 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 130
>gi|260805188|ref|XP_002597469.1| hypothetical protein BRAFLDRAFT_80523 [Branchiostoma floridae]
gi|229282734|gb|EEN53481.1| hypothetical protein BRAFLDRAFT_80523 [Branchiostoma floridae]
Length = 689
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 10/92 (10%)
Query: 118 KAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHI 167
K + T+ E C C K+ +RT + C C +G +++H+
Sbjct: 258 KKHMRTHTGEKPHRCEECSRQFSVLSSLKNHMRTHTGEKPYKCEECSRPXSQLGNLKTHM 317
Query: 168 RTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
RTHTGEKPY C +C+ + + + L H+K Y
Sbjct: 318 RTHTGEKPYTCEECSRQFSQLGHLKSHMKTHY 349
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 11/100 (11%)
Query: 107 NNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYF 156
+ FS C+ K + T+ E+ C C K +RT + C C
Sbjct: 445 SRQFSELCVL-KKHIRTHTGEIPYRCEECSKQFTDLSNLKKHMRTHKGEKPYRCEECSTQ 503
Query: 157 SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ +++H+RTHTGEKPY C C+ + + ++ L H++
Sbjct: 504 FSQLTNLKTHMRTHTGEKPYRCEDCSKQFSDLSNLKKHMR 543
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C Q S LD L ++M + C C S N+L+ K
Sbjct: 188 CEECSRQFSELDHLK-----THMRTHTGEKPYR--CEEC----SRQFNQLVH----LKKH 232
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C +G ++ H+RTHTGEKP+ C +C+ + + ++ L H++
Sbjct: 233 MRTHTGEKPYRCEECSRQFSQLGDLKKHMRTHTGEKPHRCEECSRQFSVLSSLKNHMR 290
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 17/119 (14%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKS 137
C+ C Q S L +L IR + P+ C C S L++L +H RT
Sbjct: 553 CEKCSRQFSVLSIL------KRHIRTHTGE--KPYRCEECSRQFS-RLDDLKKHMRT--- 600
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P R C C +G +++H+RTHTGEKPY+C +C+ + +++ L H++
Sbjct: 601 HTGEKPHR----CEECSRQFSLLGNLKTHMRTHTGEKPYSCEECSRQFNALSSLKRHMR 655
Score = 43.1 bits (100), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C + ++ H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 10 KTHMRTHTGEKPYRCGECSRQFSKLSNLKRHMRTHTGEKPYKCEECSRQFSQLGDLKKHM 69
Query: 196 K 196
+
Sbjct: 70 Q 70
Score = 42.7 bits (99), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 27/34 (79%)
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+++H+RTHTGEKPY CG+C+ + + ++ L H++
Sbjct: 9 LKTHMRTHTGEKPYRCGECSRQFSKLSNLKRHMR 42
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 19/120 (15%)
Query: 79 CKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
C+ C +Q S L +L H +T + P+ C C S +L+ L +H RT
Sbjct: 497 CEECSTQFSQLTNLKTHMRT---------HTGEKPYRCEDCSKQFS-DLSNLKKHMRT-- 544
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C C + ++ HIRTHTGEKPY C +C+ + + + L H++
Sbjct: 545 -HTGEKPYR----CEKCSRQFSVLSILKRHIRTHTGEKPYRCEECSRQFSRLDDLKKHMR 599
Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 10/93 (10%)
Query: 118 KAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHI 167
K + T+ E C C K +RT + C C +G ++ H+
Sbjct: 66 KKHMQTHTGEKPHKCEECCKQFSLMGSLKRHMRTHTGEKPYKCEECSRQFSQLGDLKKHM 125
Query: 168 RTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+THTGEKPY C +C + + + + H + H
Sbjct: 126 QTHTGEKPYKCEECCKQFSQLKHMQTHTGEKPH 158
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ IRT + C C + ++ HIRTHTGE PY C +C+ + ++ L H+
Sbjct: 427 KTHIRTHTGEKPYRCEECSRQFSELCVLKKHIRTHTGEIPYRCEECSKQFTDLSNLKKHM 486
Query: 196 K 196
+
Sbjct: 487 R 487
Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C + +++H+RTHTGEKPY C +C+ + + L H+
Sbjct: 174 KRHMRTHTGEKPYRCEECSRQFSELDHLKTHMRTHTGEKPYRCEECSRQFNQLVHLKKHM 233
Query: 196 K 196
+
Sbjct: 234 R 234
Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C +G ++ H++THTGEKP+ C +C + + + L H+
Sbjct: 38 KRHMRTHTGEKPYKCEECSRQFSQLGDLKKHMQTHTGEKPHKCEECCKQFSLMGSLKRHM 97
Query: 196 K 196
+
Sbjct: 98 R 98
Score = 40.0 bits (92), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C + +++HIRTHTGEKPY C +C+ + + + L H++
Sbjct: 411 YRCEECSKEFSKLSNLKTHIRTHTGEKPYRCEECSRQFSELCVLKKHIR 459
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 10/84 (11%)
Query: 118 KAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHI 167
K + T+ E C C K+ +RT + C C + ++ H+
Sbjct: 595 KKHMRTHTGEKPHRCEECSRQFSLLGNLKTHMRTHTGEKPYSCEECSRQFNALSSLKRHM 654
Query: 168 RTHTGEKPYACGQCAFRSASVAGL 191
RTHTGEKPY C +C + + + L
Sbjct: 655 RTHTGEKPYTCEECRRQFSQLTDL 678
>gi|225007644|ref|NP_001139360.1| zinc finger protein ZFAT isoform 1 [Mus musculus]
gi|205596104|sp|Q7TS63.2|ZFAT_MOUSE RecName: Full=Zinc finger protein ZFAT; AltName: Full=Zinc finger
protein 406
gi|165873690|gb|ABY67968.1| ZFAT [Mus musculus]
Length = 1237
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 271 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCSQCSYASAIKANLNVHLRK 320
Score = 40.4 bits (93), Expect = 0.45, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 273 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCSQCSYASAIKANLNVHLRKHTGE 324
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 325 K-FACDYCSFTCLSKGHLKVHIERVH 349
Score = 36.6 bits (83), Expect = 5.2, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 906 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTS 956
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 957 DGKQFKCTVCDYTAAQKPQLLRHMEQHASFKPFRCAHCHYSCNISGSLKRHYNRKH 1012
Score = 36.6 bits (83), Expect = 5.7, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 877 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 925
>gi|426392242|ref|XP_004062465.1| PREDICTED: transcriptional repressor CTCFL isoform 1 [Gorilla
gorilla gorilla]
Length = 663
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 324 TSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 383
Query: 190 GLHYHLK 196
L H++
Sbjct: 384 KLKRHMR 390
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H +T K+ +F C C Y M +HIRTHTGE
Sbjct: 460 CRYCSAVFHERY-ALIQHQKTHKN-------EKRFKCKHCSYACKQERHMTAHIRTHTGE 511
Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
KP+ C C FR + H+ + YH
Sbjct: 512 KPFTCLFCNKCFRQKQLLNAHF---RKYH 537
Score = 43.9 bits (102), Expect = 0.035, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +R+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 358 KRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEKPYECHICHTRFTQSGTMKIHI 417
Score = 39.3 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 130 EHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSAS 187
E ++ K+ +T + F C C + S + H++THT EKP+ C C FR+ +
Sbjct: 239 EKAKSTKNQRKTKGAKRTFHCDVCMFISSRMSSFNRHMKTHTNEKPHLCHLCLKTFRTVT 298
Query: 188 VAGLH 192
+ H
Sbjct: 299 LLRNH 303
Score = 35.8 bits (81), Expect = 9.6, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKTY 199
+C+ C + +R+H+ THTG +PY C C AF ++ H K T+
Sbjct: 286 LCHLCLKTFRTVTLLRNHVNTHTGTRPYKCNDCNMAFVTSGELVRHRRYKHTH 338
>gi|260781019|ref|XP_002585626.1| hypothetical protein BRAFLDRAFT_111669 [Branchiostoma floridae]
gi|229270644|gb|EEN41637.1| hypothetical protein BRAFLDRAFT_111669 [Branchiostoma floridae]
Length = 509
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C CDY + + + H+ HTGEKPY CG+C +R+A A L H++
Sbjct: 38 YMCDHCDYSAAHKASLNFHLAKHTGEKPYMCGECGYRTAHKADLSKHMR 86
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Query: 107 NNTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRS 165
+N P+ C C + L L +H RT P+R C CDY + +
Sbjct: 144 HNGEKPYMCGECGYRAAQKLT-LSKHSRT---HTGEKPYR----CDQCDYAAARKSDLDK 195
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
H HTGEKPY CG+C +R+A + L H++
Sbjct: 196 HFPKHTGEKPYMCGECGYRAAIKSDLSRHMR 226
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C CDY + + +H+RTHTG+KPY C QC + +A L HL K
Sbjct: 85 MRTHTGEKPYKCDQCDYSAARKSHLSAHMRTHTGQKPYTCDQCDYSAAQKFNLDQHLTK 143
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C CDY + + SH+ HTG+KPY C C + +A A L++HL K
Sbjct: 1 MRTHTGEKPYKCDQCDYSATQKSSLDSHLVKHTGDKPYMCDHCDYSAAHKASLNFHLAK 59
Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
+RT + + C CDY + + H+ H GEKPY CG+C +R+A
Sbjct: 113 MRTHTGQKPYTCDQCDYSAAQKFNLDQHLTKHNGEKPYMCGECGYRAA 160
Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CDY + + SH+ HTG+KPY CG+C + + L H++
Sbjct: 421 MRTHTGDKPFKCDQCDYSAAQRCSLDSHVAKHTGDKPYMCGECGYWTTRKQHLSKHMR 478
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H RTHTGEKPY C QC + +A + L H K
Sbjct: 150 YMCGECGYRAAQKLTLSKHSRTHTGEKPYRCDQCDYAAARKSDLDKHFPK 199
Score = 42.7 bits (99), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + HI HTG+KPY CG+C +R+A + L H++
Sbjct: 225 MRTHTGERPYKCVQCDYSAAVKSTLDWHIAAKHTGDKPYMCGECGYRAAQKSHLAEHMR 283
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGE+PY C QC + +A + L +H+
Sbjct: 206 YMCGECGYRAAIKSDLSRHMRTHTGERPYKCVQCDYSAAVKSTLDWHI 253
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C+Y + + H+ HTGEKPY CG+C +R++ + L H++
Sbjct: 374 YKCDHCEYSATWKSNLDRHLAKHTGEKPYMCGECGYRTSLKSTLSIHMR 422
Score = 39.3 bits (90), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 19/113 (16%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCK--SMIRTDPFRH------ 146
CK C Y + SP + + + T+ E C C+ + +++ RH
Sbjct: 348 CKECGYRV-------GSPIAL--RQHMKTHTKEKHYKCDHCEYSATWKSNLDRHLAKHTG 398
Query: 147 --KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTG+KP+ C QC + +A L H+ K
Sbjct: 399 EKPYMCGECGYRTSLKSTLSIHMRTHTGDKPFKCDQCDYSAAQRCSLDSHVAK 451
>gi|148697448|gb|EDL29395.1| zinc finger protein 406, isoform CRA_b [Mus musculus]
Length = 1272
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 317 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCSQCSYASAIKANLNVHLRK 366
Score = 40.4 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 319 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCSQCSYASAIKANLNVHLRKHTGE 370
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 371 K-FACDYCSFTCLSKGHLKVHIERVH 395
Score = 36.6 bits (83), Expect = 5.3, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 952 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTS 1002
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 1003 DGKQFKCTVCDYTAAQKPQLLRHMEQHASFKPFRCAHCHYSCNISGSLKRHYNRKH 1058
Score = 36.6 bits (83), Expect = 5.7, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 923 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 971
>gi|260815939|ref|XP_002602730.1| hypothetical protein BRAFLDRAFT_72909 [Branchiostoma floridae]
gi|229288041|gb|EEN58742.1| hypothetical protein BRAFLDRAFT_72909 [Branchiostoma floridae]
Length = 361
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + ++ H+RTHTGEKPY C QC + +A L+ HL+K
Sbjct: 301 YMCGECGYRTRQRNHLKQHLRTHTGEKPYKCDQCDYSAAQKCSLNSHLEK 350
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IRT F C CDY + + SH+ H+GEKPY CG+C +R+ L HL+
Sbjct: 264 IRTHTGEKPFKCDQCDYSAARKSTLDSHLLIHSGEKPYMCGECGYRTRQRNHLKQHLR 321
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 64/156 (41%), Gaps = 24/156 (15%)
Query: 59 LNLNLSVLLVTTIPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTF----SPFC 114
L NLS ++T + + C C S LD S+M+R N + +
Sbjct: 32 LKYNLSRHMITHTGERPYK-CNQCEYSASDKGNLD-----SHMVRHTGNKPYMCGECGYR 85
Query: 115 IYCKAVLS----TNLNELIEHCRTC------KSMIRTDPFRH----KFVCYACDYFSYNI 160
Y K LS T+ E C C KS + F+H ++C C Y +
Sbjct: 86 AYRKFTLSQHMRTHTGEKPYKCDQCDYSAALKSSLDCHLFKHTDKKPYMCGECGYGTSKK 145
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ H+R HTGEKPY C QC F SA L H++
Sbjct: 146 DGLSRHMRIHTGEKPYKCEQCNFSSARKTHLLRHMR 181
Score = 43.1 bits (100), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + SH+ HTG+KPY C +C +R+A + H++
Sbjct: 180 MRTHTGEKPYKCDQCDYSAADKSTLVSHLARHTGKKPYMCEKCGYRAARKSHFSKHMR 237
Score = 42.7 bits (99), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + C C Y S + HIRTHTGEKP+ C QC + +A + L HL
Sbjct: 236 MRTHMGEKPYKCDQCGYSSTTKPNLALHIRTHTGEKPFKCDQCDYSAARKSTLDSHL 292
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C++ S + H+RTHTGEKPY C QC + +A + L HL +
Sbjct: 161 YKCEQCNFSSARKTHLLRHMRTHTGEKPYKCDQCDYSAADKSTLVSHLAR 210
>gi|260822957|ref|XP_002602284.1| hypothetical protein BRAFLDRAFT_216665 [Branchiostoma floridae]
gi|229287591|gb|EEN58296.1| hypothetical protein BRAFLDRAFT_216665 [Branchiostoma floridae]
Length = 492
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + +H++ HTGEKPY CG+C +R+ + L H++
Sbjct: 427 MRTHSGEKPYKCDQCDYSAAHKSNLSNHVKIHTGEKPYMCGECGYRTGHKSDLFRHMR 484
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+R+ + C CDY + + H+ HTGEKPY CG+C +R+A + L H++
Sbjct: 172 VRSHSGERPYKCDQCDYSAATKSTLAQHVLKHTGEKPYMCGECGYRTARKSHLSRHMR 229
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++T F C CDY + + +H+R+H+GE+PY C QC + +A+ + L H+
Sbjct: 144 MKTHSGEKPFKCDQCDYSALQKSDLSAHVRSHSGERPYKCDQCDYSAATKSTLAQHV 200
Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+RTH+GEKPY C QC + +A + L H+K
Sbjct: 408 YMCGECGYRTARKSDLSRHMRTHSGEKPYKCDQCDYSAAHKSNLSNHVK 456
Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + C+ H++ H+GEKPY C QC + + L +HL K
Sbjct: 69 YICGECGYRAGLKSCLTKHMKIHSGEKPYKCDQCDYSAVQKTSLDFHLTK 118
Score = 42.7 bits (99), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ T H+GEKPY CG+C +R+A + L H++
Sbjct: 370 MRTHSGEKPYKCDQCDYSAAQKCDLVRHLSTKHSGEKPYMCGECGYRTARKSDLSRHMR 428
Score = 42.7 bits (99), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKPY CG+C +R+ + L H+K
Sbjct: 41 YKCNHCDYSAARKSSLDLHLTKHTGEKPYICGECGYRAGLKSCLTKHMK 89
Score = 42.4 bits (98), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C CDY + + H+R HTGEKPY C C + +A + L HL K
Sbjct: 4 MRTHTAEKPYKCGQCDYAAKWKSDLSIHLRIHTGEKPYKCNHCDYSAARKSSLDLHLTK 62
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTH+GEKPY C QC + +A L HL
Sbjct: 351 YMCGECGYRTARKSDLSRHMRTHSGEKPYKCDQCDYSAAQKCDLVRHL 398
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HT EKPY CG+C FR+ + L H+K
Sbjct: 293 YKCDQCDYSTARKHNLGIHLAIHTSEKPYMCGECGFRTRQSSNLSRHMK 341
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHT--GEKPYACGQCAFRSASVAGLHYHLK 196
++C C + + + H+++HT GEKPY CG+C +R+A + L H++
Sbjct: 321 YMCGECGFRTRQSSNLSRHMKSHTHSGEKPYMCGECGYRTARKSDLSRHMR 371
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKPY CG+C +R+ + L H+K
Sbjct: 97 YKCDQCDYSAVQKTSLDFHLTKHTGEKPYMCGECGYRARLKSYLLKHMK 145
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
H+RTHT EKPY CGQC + + + L HL+
Sbjct: 3 HMRTHTAEKPYKCGQCDYAAKWKSDLSIHLR 33
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+ THTGEK Y C QC + +A L HL
Sbjct: 265 YMCGECGYRTARKSDLSGHVSTHTGEKSYKCDQCDYSTARKHNLGIHL 312
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
H+ HTG+KPY CG+C +R+A + L H+
Sbjct: 255 HLTKHTGDKPYMCGECGYRTARKSDLSGHV 284
>gi|71896185|ref|NP_001026766.1| zinc finger protein Pegasus [Gallus gallus]
gi|82233911|sp|Q5ZLR2.1|IKZF5_CHICK RecName: Full=Zinc finger protein Pegasus; AltName: Full=Ikaros
family zinc finger protein 5
gi|53128755|emb|CAG31331.1| hypothetical protein RCJMB04_5c6 [Gallus gallus]
Length = 421
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 84 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 135
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 136 KPYKCELCSFRCSDRSNLSHHRRRKH 161
Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 78 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 130
>gi|586050|sp|Q08875.1|SUHW_DROAN RecName: Full=Protein suppressor of hairy wing
gi|396668|emb|CAA80975.1| Hairy-wing protein [Drosophila ananassae]
Length = 886
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 16/126 (12%)
Query: 79 CKHCHSQLS---HLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRT- 134
CK C + HL +CS N N+T S C C V L+ L H +
Sbjct: 351 CKICGKDFTRSYHLKRHQKYSSCS----ANENDTMS--CKVCDRVF-YRLDNLRSHLKHH 403
Query: 135 CKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+ + P +++C+ C Y++ + HIRTHTGEKP+ C C + +++ L H
Sbjct: 404 LGTQVVKKP---EYMCHVCKNCFYSLSTLNIHIRTHTGEKPFDCDLCDKKLSALVALKKH 460
Query: 195 LKKTYH 200
+ YH
Sbjct: 461 --RRYH 464
>gi|260818017|ref|XP_002603881.1| hypothetical protein BRAFLDRAFT_206062 [Branchiostoma floridae]
gi|229289205|gb|EEN59892.1| hypothetical protein BRAFLDRAFT_206062 [Branchiostoma floridae]
Length = 202
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + H+ HTGEKP+ CG+C +R+A+ A L H++K
Sbjct: 66 YKCDECDYAAATKHSLDQHMTRHTGEKPFMCGECGYRTANRASLTVHMRK 115
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + N + H+R HTG KPY CGQC + +A L H+ K
Sbjct: 94 FMCGECGYRTANRASLTVHMRKHTGVKPYKCGQCDYSAAKKGNLDQHMTK 143
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+F C CDY + + H R HTGEKPY C QC + ++ L H+ K
Sbjct: 9 RFACTECDYRAAFRSQLLIHTRKHTGEKPYKCDQCDYSASQKGSLDQHMTK 59
Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + G + H+ H+GEKP+ C +C +R+A L H++
Sbjct: 122 YKCGQCDYSAAKKGNLDQHMTKHSGEKPFMCEKCGYRTARKIDLSRHMR 170
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C CDY + G + H+ HTGEK Y C +C + +A+ L H+
Sbjct: 38 YKCDQCDYSASQKGSLDQHMTKHTGEKDYKCDECDYAAATKHSLDQHM 85
Score = 39.7 bits (91), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 25/50 (50%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + H+RTHT EKPY C QC + L HL K
Sbjct: 150 FMCEKCGYRTARKIDLSRHMRTHTSEKPYKCDQCDYAVTDKRHLKKHLDK 199
>gi|326924414|ref|XP_003208422.1| PREDICTED: zinc finger protein 711-like [Meleagris gallopavo]
Length = 807
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKT 198
+ + F H VC C + ++ H+RTHTGEKPY C C FR A + L H+K
Sbjct: 544 VHSKNFPH--VCVECGKGFRHPSELKKHMRTHTGEKPYQCQHCVFRCADQSNLKTHIKTK 601
Query: 199 Y 199
+
Sbjct: 602 H 602
Score = 37.4 bits (85), Expect = 3.4, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 42/113 (37%), Gaps = 26/113 (23%)
Query: 83 HSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTD 142
HS+ + C+ C + T PF I +LS + +L C+ CK R
Sbjct: 683 HSETHKGKKIHQCRHCDF-------KTSDPF-ILSGHILSVHTKDLPFKCKRCKRGFRQQ 734
Query: 143 PFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++ H++TH+G K Y C C + + +G H+
Sbjct: 735 TE------------------LKKHMKTHSGRKVYQCQYCEYSTTDASGFKRHV 769
>gi|260806346|ref|XP_002598045.1| hypothetical protein BRAFLDRAFT_252920 [Branchiostoma floridae]
gi|229283316|gb|EEN54057.1| hypothetical protein BRAFLDRAFT_252920 [Branchiostoma floridae]
Length = 163
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + N ++ H+ H+GEKPY CG+C ++++ + L H++
Sbjct: 8 MRTHTGEKPYKCDQCDYSATNKSTLKGHLARHSGEKPYMCGECGYKASKSSTLARHMR 65
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + +++H THTG+KPY CG C +++ S L H++
Sbjct: 64 MRTHTGEKPYKCDQCDYSASHKSTLKNHQTTHTGDKPYICGICGYKTVSKYDLSRHMR 121
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + + H+RTHTGEKPY C QC + ++ + L H
Sbjct: 45 YMCGECGYKASKSSTLARHMRTHTGEKPYKCDQCDYSASHKSTLKNH 91
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + + + H+RTHTGE+PY C QC + S L +H
Sbjct: 101 YICGICGYKTVSKYDLSRHMRTHTGERPYKCDQCDYASKDKNHLRHH 147
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
H+RTHTGEKPY C QC + + + + L HL +
Sbjct: 7 HMRTHTGEKPYKCDQCDYSATNKSTLKGHLAR 38
>gi|443688439|gb|ELT91128.1| hypothetical protein CAPTEDRAFT_220320 [Capitella teleta]
Length = 942
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 83/207 (40%), Gaps = 44/207 (21%)
Query: 13 FLVILEPTLERNRTNITSDVYIAVL---------VFSNLTFFITAQLV----------LM 53
FL++L+ L+ NR + S+ Y V + N +F LV L
Sbjct: 553 FLLVLD--LKVNRDDAQSNDYGEVSAPRVTAKEDLRDNRDYFTKLGLVAGNSQADKPDLA 610
Query: 54 SLDQILNLNLSVLLVTTIPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF 113
+ +IL L +V ++++ Q+ D D +T N + + PF
Sbjct: 611 EITKILQLTSNVESMSSL-------------QMKASDS-DERQTSEDEEAKNKSESEGPF 656
Query: 114 -CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTG 172
CIYC V + + RT K +R + C C Y S + + H+RTH G
Sbjct: 657 TCIYCDEVFTND--------RTYKGHVRGHLGLSPYKCNLCTYSSADKSTLIRHLRTHNG 708
Query: 173 EKPYACGQCAFRSASVAGLHYHLKKTY 199
E+P+ C C F + A H++K +
Sbjct: 709 ERPFQCLVCDFAFTTKANCERHVRKKH 735
>gi|426392252|ref|XP_004062470.1| PREDICTED: transcriptional repressor CTCFL isoform 6 [Gorilla
gorilla gorilla]
Length = 451
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 324 TSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 383
Query: 190 GLHYHLK 196
L H++
Sbjct: 384 KLKRHMR 390
Score = 42.7 bits (99), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +R+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 358 KRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEKPYECHICHTRFTQSGTMKIHI 417
Score = 35.8 bits (81), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 130 EHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSAS 187
E ++ K+ +T + F C C + S + H++THT EKP+ C C FR+ +
Sbjct: 239 EKAKSTKNQRKTKGAKRTFHCDVCMFISSRMSSFNRHMKTHTNEKPHLCHLCLKTFRTVT 298
Query: 188 V 188
+
Sbjct: 299 L 299
>gi|260832608|ref|XP_002611249.1| hypothetical protein BRAFLDRAFT_207518 [Branchiostoma floridae]
gi|229296620|gb|EEN67259.1| hypothetical protein BRAFLDRAFT_207518 [Branchiostoma floridae]
Length = 278
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C CDY + + H+ HTGEKPY CG+C FR+A + L H+++
Sbjct: 66 FKCDQCDYSTPKKSALDRHMVNHTGEKPYMCGECGFRTADRSYLSEHMRR 115
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C CD+ + G + H+ THTG+KP+ CG+C +R+A + L H+
Sbjct: 178 YKCDQCDFSAAQKGNLDRHMATHTGDKPFMCGECGYRTACRSNLSQHI 225
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C CDY + + H+ HTGEKPY CG+C +R+A L H+
Sbjct: 122 YRCDQCDYSTEGKSNLNRHMAKHTGEKPYMCGECGYRAAYKHHLSRHM 169
Score = 43.5 bits (101), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + H+ HTGEKP+ C +C +R+A + L H++K
Sbjct: 10 YKCDQCDYSAARKSQLDRHVAKHTGEKPFMCEECGYRTADRSHLFQHMRK 59
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F+C C Y + + HI TH+G+KP+ CG+C +R+ + + L H++
Sbjct: 206 FMCGECGYRTACRSNLSQHITTHSGDKPFMCGECGYRTTTKSHLSRHMR 254
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+ THTGEKPY C QC F +A L H+
Sbjct: 150 YMCGECGYRAAYKHHLSRHMTTHTGEKPYKCDQCDFSAAQKGNLDRHM 197
Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C Y + + + H+R HTGEKP+ C QC + + + L H+
Sbjct: 38 FMCEECGYRTADRSHLFQHMRKHTGEKPFKCDQCDYSTPKKSALDRHM 85
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
F+C C Y + + H+RTHTG KPY C QC + +A
Sbjct: 234 FMCGECGYRTTTKSHLSRHMRTHTGLKPYKCDQCQYSAA 272
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + + H+R HTG KPY C QC + + + L+ H+ K
Sbjct: 94 YMCGECGFRTADRSYLSEHMRRHTGVKPYRCDQCDYSTEGKSNLNRHMAK 143
>gi|586051|sp|Q08876.1|SUHW_DROVI RecName: Full=Protein suppressor of hairy wing
gi|396677|emb|CAA80976.1| Hairy-wing protein [Drosophila virilis]
Length = 899
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 43/153 (28%), Positives = 64/153 (41%), Gaps = 22/153 (14%)
Query: 58 ILNLNLSVLLVTTIPTQNHSL------CKHCHSQLS---HLDLLDHCKTCSYMIRPNANN 108
I N L + + Q H L CK C HL +CS N N+
Sbjct: 322 ICNAKLRSGALLKLHEQQHQLRGKPFACKICGKDFMCSYHLKCHQKYSSCS----ANEND 377
Query: 109 TFSPFCIYCKAVLSTNLNELIEHCRT-CKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHI 167
T S C C V L+ L H + + + P +++C+ C Y++ + HI
Sbjct: 378 TMS--CKVCDRVF-YRLDNLCAHLKQHLGTQVVKKP---EYMCHVCKNCFYSLSTLNIHI 431
Query: 168 RTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
RTHTGEKP+ C C + +++ L H + YH
Sbjct: 432 RTHTGEKPFDCDLCDKKFSALVALKKH--RRYH 462
Score = 45.1 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 20/131 (15%)
Query: 82 CHSQLSHLDLLDH----CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEH-CRTCK 136
CH + S ++ CK C + N C + K L T + + E+ C CK
Sbjct: 364 CHQKYSSCSANENDTMSCKVCDRVFYRLDN-----LCAHLKQHLGTQVVKKPEYMCHVCK 418
Query: 137 SM----------IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
+ IRT F C CD + ++ H R HTGEKPY C C+ A
Sbjct: 419 NCFYSLSTLNIHIRTHTGEKPFDCDLCDKKFSALVALKKHRRYHTGEKPYTCTVCSQSFA 478
Query: 187 SVAGLHYHLKK 197
L+ H+K+
Sbjct: 479 VKEVLNRHMKR 489
>gi|47205321|emb|CAF95756.1| unnamed protein product [Tetraodon nigroviridis]
Length = 396
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC + + LIEH R I T H+ C C + S + +H+R+HTGE
Sbjct: 87 CSYCN-YANKGMARLIEHIR-----IHTGEKPHR--CQLCPFASAYERHLEAHMRSHTGE 138
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C CAFR + + L +H ++ +
Sbjct: 139 KPYKCDLCAFRCSDRSNLSHHRRRRH 164
Score = 42.7 bits (99), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
K+ C C+Y + + + HIR HTGEKP+ C C F SA L H++
Sbjct: 84 KYKCSYCNYANKGMARLIEHIRIHTGEKPHRCQLCPFASAYERHLEAHMR 133
>gi|395501933|ref|XP_003755341.1| PREDICTED: zinc finger protein Pegasus [Sarcophilus harrisii]
Length = 395
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 60 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 111
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 112 KPYKCELCSFRCSDRSNLSHHRRRKH 137
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 54 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 106
>gi|410987791|ref|XP_004000178.1| PREDICTED: zinc finger protein ZFAT isoform 2 [Felis catus]
Length = 1184
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 209 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 258
Score = 41.2 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 211 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 262
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC CAF S L H+++ +
Sbjct: 263 K-FACDYCAFTCLSKGHLKVHVERVH 287
Score = 37.7 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 46/117 (39%), Gaps = 24/117 (20%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 852 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 902
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+F C CDY + + H+ H KP+ C C + S +++G LK+ Y+
Sbjct: 903 DGKQFKCTVCDYTAAQKPQLLRHMEQHASFKPFRCAHCHY-SCNISG---SLKRHYN 955
Score = 37.4 bits (85), Expect = 3.7, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 823 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 871
>gi|350582882|ref|XP_003355019.2| PREDICTED: zinc finger protein ZFAT [Sus scrofa]
Length = 891
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 262 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 311
Score = 39.7 bits (91), Expect = 0.72, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 264 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 315
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 316 K-FACDCCSFTCLSKGHLKVHVERVH 340
>gi|260823116|ref|XP_002604029.1| hypothetical protein BRAFLDRAFT_71681 [Branchiostoma floridae]
gi|229289354|gb|EEN60040.1| hypothetical protein BRAFLDRAFT_71681 [Branchiostoma floridae]
Length = 270
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKPY CG+C FR+A+ + L H+K
Sbjct: 144 YKCDQCDYSAAQKYDLDKHLAKHTGEKPYMCGECGFRTANRSHLSRHMK 192
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+R HTGEKPY CG+C +R+ + L H +
Sbjct: 88 YMCGVCGYSTAKKSHLAEHLRIHTGEKPYMCGECGYRTERKSNLSRHTR 136
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H RTHTG+KPY C QC + +A L HL K
Sbjct: 116 YMCGECGYRTERKSNLSRHTRTHTGDKPYKCDQCDYSAAQKYDLDKHLAK 165
Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ H+GEKPY CG+C +R+ + L H++
Sbjct: 200 YKCDQCDYSAARKCSLDQHLMKHSGEKPYMCGECGYRTVRKSDLSKHMR 248
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + N + H++ HTGEKPY C QC + +A L HL K
Sbjct: 172 YMCGECGFRTANRSHLSRHMKIHTGEKPYKCDQCDYSAARKCSLDQHLMK 221
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
++C C Y + + H+RTHT EKPY C QC + +A
Sbjct: 228 YMCGECGYRTVRKSDLSKHMRTHTEEKPYKCDQCDYSAA 266
Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G M H+ HTG+KPY CG C + +A + L HL+
Sbjct: 73 GSMGRHVVKHTGDKPYMCGVCGYSTAKKSHLAEHLR 108
>gi|326924086|ref|XP_003208263.1| PREDICTED: zinc finger protein Pegasus-like [Meleagris gallopavo]
Length = 421
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 84 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 135
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 136 KPYKCELCSFRCSDRSNLSHHRRRKH 161
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 78 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 130
>gi|344254395|gb|EGW10499.1| Zinc finger protein Pegasus [Cricetulus griseus]
Length = 351
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 16 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 67
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 68 KPYKCELCSFRCSDRSNLSHHRRRKH 93
Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 10 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 62
>gi|259027992|gb|ABH10101.2| BORIS transcription factor transcript variant C7 [Homo sapiens]
gi|259027994|gb|ABH10102.2| BORIS transcription factor transcript variant C9 [Homo sapiens]
Length = 426
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 324 TSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 383
Query: 190 GLHYHLK 196
L H++
Sbjct: 384 KLKRHMR 390
>gi|260787837|ref|XP_002588958.1| hypothetical protein BRAFLDRAFT_89149 [Branchiostoma floridae]
gi|229274130|gb|EEN44969.1| hypothetical protein BRAFLDRAFT_89149 [Branchiostoma floridae]
Length = 257
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY CGQC + +A + L+ HL K
Sbjct: 94 YMCEECGYRTAKKFHLAEHMRTHTGEKPYKCGQCDYSAAKKSTLNRHLAK 143
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ H GEKPY CG+C +R+A + L+ H++
Sbjct: 113 MRTHTGEKPYKCGQCDYSAAKKSTLNRHLAKHAGEKPYMCGECGYRTAQKSTLYRHIE 170
Score = 42.7 bits (99), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY C +C +R++ L H++
Sbjct: 1 MRTHTGEKPYKCDQCDYSASRKSSLDHHLAKHTGEKPYMCEKCGYRTSRKNDLSQHIR 58
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+RTHTGEKPY C QC + + L H K
Sbjct: 206 YMCEECGYRTTWKSTLSRHMRTHTGEKPYKCDQCDYSARRKYALDKHCK 254
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
I T + C CDY + + H+ HTG+KPY C +C +R+ + L H++
Sbjct: 169 IETHTLEKSYKCDQCDYSAAQKSTLNQHVVNHTGDKPYMCEECGYRTTWKSTLSRHMR 226
Score = 39.7 bits (91), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 167 IRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RTHTGEKPY C QC + ++ + L +HL K
Sbjct: 1 MRTHTGEKPYKCDQCDYSASRKSSLDHHLAK 31
>gi|195565707|ref|XP_002106440.1| GD16882 [Drosophila simulans]
gi|194203816|gb|EDX17392.1| GD16882 [Drosophila simulans]
Length = 465
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
FVC +C Y N +R HIR+HTGE+P+ C C R S +GL H+
Sbjct: 352 FVCESCGYSCRNKETLRVHIRSHTGERPFGCQVCDKRFPSHSGLREHM 399
>gi|147905895|ref|NP_001090740.1| zinc finger protein 268 [Xenopus (Silurana) tropicalis]
gi|120537296|gb|AAI29016.1| LOC100036726 protein [Xenopus (Silurana) tropicalis]
Length = 815
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C+YC S NL+ L+EH R+ + R F+C C + ++ H+R HTGE
Sbjct: 205 CLYCTKRFS-NLSNLMEHERSHQE-------RKAFICSECGKSFHRHSILKVHLRIHTGE 256
Query: 174 KPYACGQCAFR 184
+PYAC C R
Sbjct: 257 RPYACPDCGRR 267
>gi|426253226|ref|XP_004020301.1| PREDICTED: zinc finger protein Pegasus [Ovis aries]
Length = 419
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 84 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 135
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 136 KPYKCELCSFRCSDRSNLSHHRRRKH 161
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 78 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 130
>gi|426220182|ref|XP_004023558.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger and BTB
domain-containing protein 5-like [Ovis aries]
Length = 675
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 29/53 (54%)
Query: 146 HKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKT 198
HK+ C C + + HIR HTGEKPYAC +C R + + L+ H K T
Sbjct: 609 HKYACKICCKTFLTLTDCKKHIRVHTGEKPYACLKCGKRFSQSSHLYKHSKTT 661
>gi|354496940|ref|XP_003510581.1| PREDICTED: zinc finger protein Pegasus-like [Cricetulus griseus]
Length = 419
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 84 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 135
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 136 KPYKCELCSFRCSDRSNLSHHRRRKH 161
Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 78 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 130
>gi|348536359|ref|XP_003455664.1| PREDICTED: zinc finger protein 513-like [Oreochromis niloticus]
Length = 630
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 118 KAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHI 167
KA+ + + + + C C K ++T F C C Y S + ++ H+
Sbjct: 183 KALTAEDKSAKMHSCHLCGFSSRYANHVKRHMKTHNGEKPFNCPLCTYASAQLVNLQRHL 242
Query: 168 RTHTGEKPYACGQCAFRSASVAGLHYH 194
R HTGEKPY C C F +S+ L H
Sbjct: 243 RIHTGEKPYKCDSCTFACSSLGNLKRH 269
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+ C AC + ++ + H++TH+GEKPY C QC + SA L H
Sbjct: 436 YTCAACPFLTHYPNHLARHMKTHSGEKPYKCPQCDYASAHFDNLKRH 482
Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++T + C CDY S + ++ H R HTGEKPY C C + ++A L H
Sbjct: 455 MKTHSGEKPYKCPQCDYASAHFDNLKRHHRVHTGEKPYKCHLCDYACGNLANLKRH 510
Score = 44.7 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K++ D C+ C + S ++ H++TH GEKP+ C C + SA + L HL
Sbjct: 183 KALTAEDKSAKMHSCHLCGFSSRYANHVKRHMKTHNGEKPFNCPLCTYASAQLVNLQRHL 242
Query: 196 K 196
+
Sbjct: 243 R 243
Score = 42.4 bits (98), Expect = 0.097, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C+ CDY N+ ++ H R H+G KP+ C C++ L H+
Sbjct: 492 YKCHLCDYACGNLANLKRHQRVHSGAKPFQCAVCSYSCNQSMNLKRHM 539
Score = 39.7 bits (91), Expect = 0.66, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 23/50 (46%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C Y ++ H+ HTGEKPY C +C + + H KK
Sbjct: 520 FQCAVCSYSCNQSMNLKRHMLRHTGEKPYKCQECGYTTGHWDNYKRHQKK 569
>gi|332835218|ref|XP_001151249.2| PREDICTED: zinc finger protein Pegasus isoform 1 [Pan troglodytes]
gi|332835220|ref|XP_003312847.1| PREDICTED: zinc finger protein Pegasus isoform 2 [Pan troglodytes]
gi|332835224|ref|XP_003312848.1| PREDICTED: zinc finger protein Pegasus isoform 3 [Pan troglodytes]
gi|397490754|ref|XP_003816356.1| PREDICTED: zinc finger protein Pegasus isoform 1 [Pan paniscus]
gi|397490756|ref|XP_003816357.1| PREDICTED: zinc finger protein Pegasus isoform 2 [Pan paniscus]
gi|397490758|ref|XP_003816358.1| PREDICTED: zinc finger protein Pegasus isoform 3 [Pan paniscus]
gi|397490760|ref|XP_003816359.1| PREDICTED: zinc finger protein Pegasus isoform 4 [Pan paniscus]
gi|410210094|gb|JAA02266.1| IKAROS family zinc finger 5 (Pegasus) [Pan troglodytes]
gi|410249598|gb|JAA12766.1| IKAROS family zinc finger 5 (Pegasus) [Pan troglodytes]
gi|410291230|gb|JAA24215.1| IKAROS family zinc finger 5 (Pegasus) [Pan troglodytes]
gi|410328461|gb|JAA33177.1| IKAROS family zinc finger 5 (Pegasus) [Pan troglodytes]
Length = 419
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 84 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 135
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 136 KPYKCELCSFRCSDRSNLSHHRRRKH 161
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 78 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 130
>gi|239799530|tpe|CAU95876.1| TPA: putative Pegasus 2 protein [Tetraodon nigroviridis]
Length = 402
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC + + LIEH R I T H+ C C + S + +H+R+HTGE
Sbjct: 87 CSYCN-YANKGMARLIEHIR-----IHTGEKPHR--CQLCPFASAYERHLEAHMRSHTGE 138
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C CAFR + + L +H ++ +
Sbjct: 139 KPYKCDLCAFRCSDRSNLSHHRRRRH 164
Score = 42.7 bits (99), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
K+ C C+Y + + + HIR HTGEKP+ C C F SA L H++
Sbjct: 84 KYKCSYCNYANKGMARLIEHIRIHTGEKPHRCQLCPFASAYERHLEAHMR 133
>gi|260823052|ref|XP_002603997.1| hypothetical protein BRAFLDRAFT_71714 [Branchiostoma floridae]
gi|229289322|gb|EEN60008.1| hypothetical protein BRAFLDRAFT_71714 [Branchiostoma floridae]
Length = 292
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H RTHTGEKPY C QC F +A + L+ HL K
Sbjct: 43 YMCGDCGYRTAKKSHLSQHTRTHTGEKPYKCDQCVFSAAGKSALNQHLAK 92
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + G + +H R HTGEKPY C +C +R+A A L H++
Sbjct: 127 YKCDQCDYSTGEKGNLANHQRKHTGEKPYMCEECGYRAARKAHLLLHMR 175
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
+RT + C CDY + + + +H R HTGEKPY CG+C FR+
Sbjct: 174 MRTHTGEKPYKCDQCDYSAADNSTLANHQRKHTGEKPYMCGECGFRT 220
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+RT H+GEKPY CG+C +R+A + L H++
Sbjct: 230 MRTHTGEKPYRCDQCDYSTGEKCNLVRHVRTKHSGEKPYMCGECGYRTAQKSDLSKHMR 288
Score = 42.7 bits (99), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A + L H +K
Sbjct: 155 YMCEECGYRAARKAHLLLHMRTHTGEKPYKCDQCDYSAADNSTLANHQRK 204
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HTGEKPY C QC + + L H +K
Sbjct: 99 YMCGDCGYMTAYKSDLSKHMRIHTGEKPYKCDQCDYSTGEKGNLANHQRK 148
Score = 39.3 bits (90), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C + + + H+RTHTGEKPY C QC + + L H++
Sbjct: 211 YMCGECGFRTTRKFILSGHMRTHTGEKPYRCDQCDYSTGEKCNLVRHVR 259
Score = 39.3 bits (90), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RT + C C + + + H+ HTGEKPY CG C + +A + L H++
Sbjct: 62 TRTHTGEKPYKCDQCVFSAAGKSALNQHLAKHTGEKPYMCGDCGYMTAYKSDLSKHMR 119
Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 161 GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G M H+ TGEKPY CG C +R+A + L H +
Sbjct: 28 GNMGWHVLKQTGEKPYMCGDCGYRTAKKSHLSQHTR 63
>gi|449281167|gb|EMC88320.1| Zinc finger protein Pegasus [Columba livia]
Length = 419
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 84 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 135
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 136 KPYKCELCSFRCSDRSNLSHHRRRKH 161
Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 78 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 130
>gi|189181698|ref|NP_001094168.1| zinc finger protein 131 [Rattus norvegicus]
gi|149059422|gb|EDM10429.1| zinc finger protein 131, isoform CRA_a [Rattus norvegicus]
gi|171847088|gb|AAI61974.1| Zfp131 protein [Rattus norvegicus]
Length = 619
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 37/133 (27%), Positives = 52/133 (39%), Gaps = 32/133 (24%)
Query: 85 QLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC-KSMIRTDP 143
QLSH+ L HC+ C N +F F + + + S + C C K +R
Sbjct: 253 QLSHVKDLFHCEKC--------NRSFKLFYHFKEHMKSHSTESF--KCEICNKRYLRESA 302
Query: 144 FRHKFVCY------------------ACDYFSY---NIGCMRSHIRTHTGEKPYACGQCA 182
++H CY C Y + G + H+R HTGEKP+ C C
Sbjct: 303 WKHHLNCYHLEEGGVSKKQRTGKKIHTCQYCEKQFDHFGHFKEHLRKHTGEKPFECSNCH 362
Query: 183 FRSASVAGLHYHL 195
R A + L HL
Sbjct: 363 ERFARNSTLKCHL 375
>gi|344296041|ref|XP_003419718.1| PREDICTED: zinc finger protein Pegasus [Loxodonta africana]
Length = 419
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 84 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 135
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 136 KPYKCELCSFRCSDRSNLSHHRRRKH 161
Score = 43.9 bits (102), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 78 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 130
>gi|260795673|ref|XP_002592829.1| hypothetical protein BRAFLDRAFT_201750 [Branchiostoma floridae]
gi|229278053|gb|EEN48840.1| hypothetical protein BRAFLDRAFT_201750 [Branchiostoma floridae]
Length = 121
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C +G +++H+RTHTGEKPY+CG+C+ + + L H++
Sbjct: 1 MRTHTGEKPYRCEECSKQFSKLGNLKTHMRTHTGEKPYSCGECSKQFSQQGDLKKHMR 58
Score = 42.7 bits (99), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C G ++ H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 26 KTHMRTHTGEKPYSCGECSKQFSQQGDLKKHMRTHTGEKPYKCEECSRQFSVLHNLEKHV 85
Query: 196 K 196
+
Sbjct: 86 R 86
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 49/118 (41%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C Q S L L ++M +S C C S +L +H
Sbjct: 12 CEECSKQFSKLGNLK-----THMRTHTGEKPYS--CGECSKQFSQQ-GDLKKH------- 56
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C + + H+RTHTGEKPY C +C+ R + + L H++
Sbjct: 57 MRTHTGEKPYKCEECSRQFSVLHNLEKHVRTHTGEKPYRCEECSRRFSELVTLKRHMR 114
>gi|260832610|ref|XP_002611250.1| hypothetical protein BRAFLDRAFT_207650 [Branchiostoma floridae]
gi|229296621|gb|EEN67260.1| hypothetical protein BRAFLDRAFT_207650 [Branchiostoma floridae]
Length = 230
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + G + H+ HTGEKPY CG+C +R+A L H++
Sbjct: 38 YQCDQCDYSTARKGNLDRHMANHTGEKPYMCGECGYRAAEKYSLTVHMR 86
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+R+ ++C C+Y + + SH+ HTGEKPY CG+C +R+A + L H++
Sbjct: 141 MRSHTGEKPYICDQCNYSAAKKSDLDSHMARHTGEKPYMCGECGYRTAHRSNLTAHMR 198
Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CD+ + + H+ THTG KPY CG+C R+A L H++
Sbjct: 85 MRTHTGAKPYKCDLCDFSAATKSGLNKHMATHTGNKPYMCGECGLRTADRYSLTVHMR 142
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTG KPY C C F +A+ +GL+ H+
Sbjct: 66 YMCGECGYRAAEKYSLTVHMRTHTGAKPYKCDLCDFSAATKSGLNKHM 113
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + + +H+RTHTGEKPY C QC + + + L HL
Sbjct: 178 YMCGECGYRTAHRSNLTAHMRTHTGEKPYKCDQCDYSATKKSYLTKHL 225
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H+R+HTGEKPY C QC + +A + L H+ +
Sbjct: 122 YMCGECGLRTADRYSLTVHMRSHTGEKPYICDQCNYSAAKKSDLDSHMAR 171
Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+F+C C Y + + H+RTHT KPY C QC + +A L H+
Sbjct: 9 RFMCGVCGYRATARSNITIHMRTHTDVKPYQCDQCDYSTARKGNLDRHM 57
>gi|260815030|ref|XP_002602216.1| hypothetical protein BRAFLDRAFT_216589 [Branchiostoma floridae]
gi|229287523|gb|EEN58228.1| hypothetical protein BRAFLDRAFT_216589 [Branchiostoma floridae]
Length = 473
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + F C CDY + + H R HTGEKPY CG+C +R+A L H++
Sbjct: 230 MRTHTGQKPFKCDQCDYSAATKCALHRHQRKHTGEKPYMCGECGYRAAQRQHLIRHMR 287
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RT + C CD+ + G + H+ THTGE+PY CG+C +R+ + L H++
Sbjct: 117 TRTHAGEKPYKCDHCDFSAAAKGNLDQHVATHTGERPYICGECGYRATQKSTLSVHMR 174
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CDY + + + H+R HTGEKPY CG C FR+ + L H +
Sbjct: 70 FKCGHCDYSTADKSTLDKHLRKHTGEKPYMCGYCGFRTTRKSVLSVHTR 118
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTG+KP+ C QC + +A+ LH H +K
Sbjct: 211 YMCEECGYRTAKKCSLSQHMRTHTGQKPFKCDQCDYSAATKCALHRHQRK 260
Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + HIRTHTGEKPY C QC + + + L H+K
Sbjct: 323 YMCEKCGYRTAKKCNLYEHIRTHTGEKPYRCDQCDYSTGQKSTLGQHMK 371
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H + H+GEKPY C +C +R+A L+ H++
Sbjct: 286 MRTHTGEKPYTCDLCDYSAAEKHHLIDHQKRHSGEKPYMCEKCGYRTAKKCNLYEHIR 343
Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 148 FVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C+Y + + HI HT EKPY CG+C +R+A+ + L H+K
Sbjct: 382 FKCDQCEYAAAQKANLERHIAAKHTVEKPYMCGECGYRTANRSHLSRHMK 431
Score = 39.3 bits (90), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
++C C Y + N + H++THTG++PY C QC + +A L
Sbjct: 411 YMCGECGYRTANRSHLSRHMKTHTGDRPYMCDQCDYSAAEKHNL 454
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C + + + H RTH GEKPY C C F +A+ L H+
Sbjct: 98 YMCGYCGFRTTRKSVLSVHTRTHAGEKPYKCDHCDFSAAAKGNLDQHV 145
Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 20/36 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
++C C Y + HIR HTGEKPY C QC +
Sbjct: 13 YMCRECGYRTAKKFNFSQHIRIHTGEKPYKCDQCEY 48
Score = 36.6 bits (83), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C C + +A L H K+
Sbjct: 267 YMCGECGYRAAQRQHLIRHMRTHTGEKPYTCDLCDYSAAEKHHLIDHQKR 316
Score = 36.2 bits (82), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
H+ HTGEKPY C +C +R+A L H++
Sbjct: 201 HVVKHTGEKPYMCEECGYRTAKKCSLSQHMR 231
>gi|440906607|gb|ELR56850.1| Zinc finger protein Pegasus, partial [Bos grunniens mutus]
Length = 425
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 90 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 141
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 142 KPYKCELCSFRCSDRSNLSHHRRRKH 167
Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 84 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 136
>gi|291413272|ref|XP_002722900.1| PREDICTED: zinc finger protein 426 [Oryctolagus cuniculus]
Length = 595
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHL 195
++ P + + C C N C+ +HIRTHTGEKPY C +C AF ++S H+ +
Sbjct: 272 VQMPPVKKSYECKTCGKLFRNSSCLNNHIRTHTGEKPYECKECGKAFTTSSSLTEHFRI 330
Score = 39.7 bits (91), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 10/77 (12%)
Query: 116 YCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFV-------CYACDYFSYNI---GCMRS 165
Y + L T+ E C+ C R+ R+K + Y C Y + +
Sbjct: 407 YLRKHLKTHTTEKPFQCKLCGKFFRSSACRNKHIRIHTGIKPYKCQYCAKAFTVSSSLTE 466
Query: 166 HIRTHTGEKPYACGQCA 182
HIRTHTGE+PY C +C
Sbjct: 467 HIRTHTGERPYECKECG 483
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 81/211 (38%), Gaps = 47/211 (22%)
Query: 16 ILEPTLERNRTNITSDVYIAVLVFSNLTFFITAQLVLMSLDQILNLNLSVLLVTTIPTQN 75
+L+P+ E N VF N ++F + + +++ N V T
Sbjct: 220 MLDPSFEGNNYGK---------VFLNQSYF-QGHMENQNGEKVYECNQCVGAST------ 263
Query: 76 HSLCKHCHSQLSHLDLLDHCKTCSYMIRPNA--NN------TFSPF-CIYCKAVLSTNLN 126
HS Q+ + CKTC + R ++ NN P+ C C +T+ +
Sbjct: 264 HSTSNAVPVQMPPVKKSYECKTCGKLFRNSSCLNNHIRTHTGEKPYECKECGKAFTTS-S 322
Query: 127 ELIEH-----------CRTC------KSMIRTDPFRH----KFVCYACDYFSYNIGCMRS 165
L EH C+ C +S + T H + C C + C+
Sbjct: 323 SLTEHFRIHTGEKPYKCKECGKAFTKRSGLTTHVLTHTGEKPYECRECGKAFTSSSCLTL 382
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
H+RTHTGE+PY C +C + + L HLK
Sbjct: 383 HVRTHTGERPYICKECGKAFHASSYLRKHLK 413
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ H+RTHTGEKPY C +C + + L++H +
Sbjct: 521 LSQHVRTHTGEKPYECKECGKSFTTSSNLYHHER 554
Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA--FRSASVAGLH 192
+RT ++C C + +R H++THT EKP+ C C FRS++ H
Sbjct: 384 VRTHTGERPYICKECGKAFHASSYLRKHLKTHTTEKPFQCKLCGKFFRSSACRNKH 439
>gi|260788542|ref|XP_002589308.1| hypothetical protein BRAFLDRAFT_233345 [Branchiostoma floridae]
gi|229274485|gb|EEN45319.1| hypothetical protein BRAFLDRAFT_233345 [Branchiostoma floridae]
Length = 369
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C Y + + H+ THTGEKPY CG+C +R+A + L HLKK
Sbjct: 318 YRCDQCGYSAAQKNTLERHMVTHTGEKPYMCGECGYRTAHRSTLSAHLKK 367
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 151 YACDYFSYNIG---CMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
Y CD SY+ + H+RTHTGEK Y CG+C +R+A + L H+ K
Sbjct: 262 YNCDKCSYSAAQKIALDQHMRTHTGEKRYMCGECGYRTAKKSHLSAHMAK 311
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C Y + + H+ HTG+KPY CG+C +R+A + L HL+
Sbjct: 29 MRTHTGAKPYKCDQCGYSTAQRSNLDKHMAQHTGDKPYMCGECGYRTADKSSLTKHLR 86
Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C C Y + + H+ HTGEKPY CG+C +R++ + L H++K
Sbjct: 85 LRTHTGARPYKCNQCQYSTAQKCNLDKHMAKHTGEKPYMCGECGYRTSDKSWLTNHIRK 143
Score = 43.1 bits (100), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+RTHTG +PY C QC + +A L H+ K
Sbjct: 66 YMCGECGYRTADKSSLTKHLRTHTGARPYKCNQCQYSTAQKCNLDKHMAK 115
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 19/29 (65%)
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYH 194
H+R HTGEKPY CGQC F SA L H
Sbjct: 196 HMRKHTGEKPYKCGQCDFSSAWKRSLDQH 224
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C + + + + H+RTHTG KPY C QC + +A + L H+
Sbjct: 10 YMCGECGHRTAHRSSLTVHMRTHTGAKPYKCDQCGYSTAQRSNLDKHM 57
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + +HIR H GEKPY C +C F S L H+ K
Sbjct: 122 YMCGECGYRTSDKSWLTNHIRKHKGEKPYKCDRCNFSSVWKKNLDIHMVK 171
Score = 39.3 bits (90), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT +++C C Y + + +H+ HTG KPY C QC + +A L H+
Sbjct: 281 MRTHTGEKRYMCGECGYRTAKKSHLSAHMAKHTGVKPYRCDQCGYSAAQKNTLERHM 337
Score = 39.3 bits (90), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++ C C + + + + H+R HTGE+PY C +C++ +A L H++
Sbjct: 233 RYTCQECGFRTAHRANLVQHVRIHTGERPYNCDKCSYSAAQKIALDQHMR 282
Score = 39.3 bits (90), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 29/59 (49%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
IR + C C++ S + H+ HTGEKPY CG+C R A L H++K
Sbjct: 141 IRKHKGEKPYKCDRCNFSSVWKKNLDIHMVKHTGEKPYMCGECGLRMAYRTDLSKHMRK 199
Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 167 IRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ THTGEKPY CG+C R+A + L H++
Sbjct: 1 MGTHTGEKPYMCGECGHRTAHRSSLTVHMR 30
>gi|158563915|sp|Q5R9W9.2|IKZF5_PONAB RecName: Full=Zinc finger protein Pegasus; AltName: Full=Ikaros
family zinc finger protein 5
Length = 420
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 84 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 135
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 136 KPYKCELCSFRCSDRSNLSHHRRRKH 161
Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 78 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 130
>gi|11612388|gb|AAG39220.1|AF230808_1 zinc finger transcription factor Pegasus [Homo sapiens]
Length = 419
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 84 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 135
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 136 KPYKCELCSFRCSDRSNLSHHRRRKH 161
Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 78 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 130
>gi|55729419|emb|CAH91441.1| hypothetical protein [Pongo abelii]
Length = 426
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 90 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 141
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 142 KPYKCELCSFRCSDRSNLSHHRRRKH 167
Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 84 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 136
>gi|260795607|ref|XP_002592796.1| hypothetical protein BRAFLDRAFT_65378 [Branchiostoma floridae]
gi|229278020|gb|EEN48807.1| hypothetical protein BRAFLDRAFT_65378 [Branchiostoma floridae]
Length = 560
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T K +RT + C C + G ++SH+RTHTGEKPY C +C+ + + L
Sbjct: 242 TLKKHMRTHTGEKPYKCKECSWQFSQQGALKSHMRTHTGEKPYKCEECSRQFSRQYSLKK 301
Query: 194 HLK 196
H++
Sbjct: 302 HME 304
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C + ++ H+RTHTGEKPY C +C+++ + L H+
Sbjct: 216 KRHMRTHTGEKPYKCEECSRQFSELSTLKKHMRTHTGEKPYKCKECSWQFSQQGALKSHM 275
Query: 196 K 196
+
Sbjct: 276 R 276
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C +++H+RTHTGEKPY CG+C+ + ++GL H+
Sbjct: 160 KKHMRTHNGEKPYKCEECSRQFSLFHHLKTHMRTHTGEKPYKCGECSSQFIELSGLKRHM 219
Query: 196 K 196
+
Sbjct: 220 R 220
Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 56/145 (38%), Gaps = 22/145 (15%)
Query: 54 SLDQILNLNLSVLLVTTIPTQNHSLCKHCHSQLSHL--DLLDHCKTCSYMIRPNANNTFS 111
S Q+ NL + T C SQL HL D+L H Y
Sbjct: 401 SFGQLCNLKSHIRTHTGAKPYRCEECSRHFSQLGHLRTDMLTHTGEKPYR---------- 450
Query: 112 PFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHT 171
C C S N L + K I+T + C C + +++H+RTHT
Sbjct: 451 --CEEC----SKQFNRL----ESLKKHIKTHTGERPYKCEECSRHFSRLDRLKTHMRTHT 500
Query: 172 GEKPYACGQCAFRSASVAGLHYHLK 196
GEKPY C +C+ + + L HL+
Sbjct: 501 GEKPYRCEECSRQFNHLCNLKKHLR 525
Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 113 FCIYCKAVLSTNLNELIEHCRTCK--SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
+ IY + +++ L++ + K S +++ ++ C C+ + ++SHIRTH
Sbjct: 356 YTIYRRMSATSSAQSLVDASKEAKKDSSVQSARKEKRYRCDECNKSFGQLCNLKSHIRTH 415
Query: 171 TGEKPYACGQCA 182
TG KPY C +C+
Sbjct: 416 TGAKPYRCEECS 427
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C ++ HI+THTGEKPY C +C+ + + + L H++
Sbjct: 116 YKCEECSRQFSLFDSLKKHIQTHTGEKPYRCEECSKQFSQKSNLKKHMR 164
>gi|260823134|ref|XP_002604038.1| hypothetical protein BRAFLDRAFT_71672 [Branchiostoma floridae]
gi|229289363|gb|EEN60049.1| hypothetical protein BRAFLDRAFT_71672 [Branchiostoma floridae]
Length = 360
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C Y++ + + H+RTHTGEKPY C QC + +A+ + L HL+
Sbjct: 103 MRTHTGEKPYKCGECGYWAAQMTSLFLHMRTHTGEKPYKCDQCDYSAATKSDLDSHLR 160
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + SH+RTH EKPY CG+C +R+A L H++
Sbjct: 131 MRTHTGEKPYKCDQCDYSAATKSDLDSHLRTHIDEKPYMCGECGYRAAHKHHLSRHMR 188
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C Y + M H+RTHTGEKPY CG+C + +A + L H++
Sbjct: 84 YKCGECGYRTALKANMSGHMRTHTGEKPYKCGECGYWAAQMTSLFLHMR 132
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY CG+C +R+ + L HL+
Sbjct: 241 MRTHTGEKPYKCDQCDYSAAQKSSLGKHLSKHTGEKPYMCGECGYRTVLKSDLSRHLR 298
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
S +RT ++C C Y + + + H+RTHTGEKPY C QC + +A L YH
Sbjct: 157 SHLRTHIDEKPYMCGECGYRAAHKHHLSRHMRTHTGEKPYKCDQCDYSAADRTTLSYH 214
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + + H+RTHTGEKPY C QC + +A + L HL K
Sbjct: 222 YMCGECGHRTASKSHLSLHMRTHTGEKPYKCDQCDYSAAQKSSLGKHLSK 271
Score = 42.7 bits (99), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 121 LSTNLNELIEHCRTC--KSMIRTDPFRH--------KFVCYACDYFSYNIGCMRSHIRTH 170
LS + E C C ++++++D RH + C CDY + + H R H
Sbjct: 269 LSKHTGEKPYMCGECGYRTVLKSDLSRHLRTHTGDKPYKCDQCDYSAIQKHSLDRHKRNH 328
Query: 171 TGEKPYACGQCAFRSASVAGLHYHLK 196
G+KP+ C +C FR+A + L H+K
Sbjct: 329 AGDKPFMCEECGFRTARKSVLTLHMK 354
Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 159 NIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
N G M H + GEKPY CG+C +R+A A + H++
Sbjct: 67 NRGSMERHAVKNIGEKPYKCGECGYRTALKANMSGHMR 104
>gi|194041600|ref|XP_001927962.1| PREDICTED: zinc finger protein Pegasus [Sus scrofa]
Length = 419
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 84 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 135
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 136 KPYKCELCSFRCSDRSNLSHHRRRKH 161
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 78 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 130
>gi|183985788|gb|AAI66375.1| LOC100036726 protein [Xenopus (Silurana) tropicalis]
Length = 816
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C+YC S NL+ L+EH R+ + R F+C C + ++ H+R HTGE
Sbjct: 205 CLYCTKRFS-NLSNLMEHERSHQE-------RKAFICSECGKSFHRHSILKVHLRIHTGE 256
Query: 174 KPYACGQCAFR 184
+PYAC C R
Sbjct: 257 RPYACPDCGRR 267
>gi|157820473|ref|NP_001101025.1| zinc finger protein Pegasus [Rattus norvegicus]
gi|149061275|gb|EDM11698.1| zinc finger protein, subfamily 1A, 5 (predicted), isoform CRA_b
[Rattus norvegicus]
gi|149061276|gb|EDM11699.1| zinc finger protein, subfamily 1A, 5 (predicted), isoform CRA_b
[Rattus norvegicus]
Length = 419
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 84 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 135
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 136 KPYKCELCSFRCSDRSNLSHHRRRKH 161
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 78 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 130
>gi|224097349|ref|XP_002193247.1| PREDICTED: zinc finger protein 711 [Taeniopygia guttata]
Length = 761
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKT 198
+ + F H VC C + ++ H+RTHTGEKPY C C FR A + L H+K
Sbjct: 498 VHSKNFPH--VCVECGKGFRHPSELKKHMRTHTGEKPYQCQHCVFRCADQSNLKTHIKTK 555
Query: 199 Y 199
+
Sbjct: 556 H 556
Score = 36.6 bits (83), Expect = 5.4, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 26/113 (23%)
Query: 83 HSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTD 142
HS+ + C+ C + T PF + +LS + +L C+ CK R
Sbjct: 637 HSETHKGKKIHQCRHCDF-------KTSDPF-VLSGHILSVHTKDLPFKCKRCKRGFRQQ 688
Query: 143 PFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++ H++TH+G K Y C C + + +G H+
Sbjct: 689 ------------------NELKKHMKTHSGRKVYQCQYCEYSTTDASGFKRHV 723
>gi|260826640|ref|XP_002608273.1| hypothetical protein BRAFLDRAFT_125083 [Branchiostoma floridae]
gi|229293624|gb|EEN64283.1| hypothetical protein BRAFLDRAFT_125083 [Branchiostoma floridae]
Length = 4574
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+ C++CDY S ++ ++ H+RTHTGE+P+ C C + + V ++ H
Sbjct: 2999 YECHSCDYQSKDLCALKRHLRTHTGERPFQCQHCPYSARQVTNMNRH 3045
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C + +Y +R+H+R H+GEKPYAC C +R+ L+ H++
Sbjct: 2458 FNCEECGFSTYRRETLRTHMRIHSGEKPYACSFCPYRARQKPNLNTHMQ 2506
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ ++ C CDY S + + H RTHTGEKPY+C C +++A L H+K
Sbjct: 3689 KKRYECQICDYTSEDKSRLVKHQRTHTGEKPYSCRFCPYKTALNESLWKHMK 3740
Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+C C Y + + + HIR HTGEKP+ C C F+++ L H K
Sbjct: 3462 LCGICGYIACSRARLVKHIRKHTGEKPFKCAHCPFKTSLEDTLAKHNK 3509
Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 95 CKTCSYMIRPNAN----NTFSPFCIYCKAVLSTNLNE-LIEHCRTCKSMIRTDPFRHK-- 147
CK CSY A+ T Y L T E EH + + R+ R +
Sbjct: 2516 CKYCSYSTSNKASTRLHETLHESLKYENKNLGTPEKEDYSEHSDSPEKSPRSKVTRDRKG 2575
Query: 148 -FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C + + + ++ H++ H G KP+ C C++R+ ++ + H K
Sbjct: 2576 LFRCKHCSFHTRHSTSIQRHLKIHEGSKPFKCKHCSYRAITLFQIQGHEK 2625
>gi|260780954|ref|XP_002585596.1| hypothetical protein BRAFLDRAFT_111761 [Branchiostoma floridae]
gi|229270609|gb|EEN41607.1| hypothetical protein BRAFLDRAFT_111761 [Branchiostoma floridae]
Length = 277
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C +G ++ H+RTHTGEKPY C +C+ + + ++ L H+
Sbjct: 96 KKHMRTHTGEKPYKCEECSRQFSELGALKRHMRTHTGEKPYKCEECSRQFSELSNLKKHM 155
Query: 196 KK 197
+K
Sbjct: 156 RK 157
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C ++G ++SHIRTHTGEKPY C +C+ + + ++ L H++
Sbjct: 24 YRCEECSRCFSHLGHLKSHIRTHTGEKPYRCEECSRQFSQLSNLKTHMQ 72
Score = 42.7 bits (99), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 59/144 (40%), Gaps = 22/144 (15%)
Query: 55 LDQILNLNLSVLLVTTIPTQNHSLCKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPF 113
Q+ NL + T + H C+ C Q S L +L H +T + P+
Sbjct: 61 FSQLSNLKTHMQTHTG---EKHYKCEECSKQFSQLKNLKKHMRT---------HTGEKPY 108
Query: 114 -CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTG 172
C C S L L H +RT + C C + ++ H+R HTG
Sbjct: 109 KCEECSRQFS-ELGALKRH-------MRTHTGEKPYKCEECSRQFSELSNLKKHMRKHTG 160
Query: 173 EKPYACGQCAFRSASVAGLHYHLK 196
EKPY C +C+ + + + L +H++
Sbjct: 161 EKPYQCEECSRQFSELCNLKHHMR 184
Score = 39.7 bits (91), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT C C ++ ++SH+R HTGEKPY C +C + + ++ L H+
Sbjct: 180 KHHMRTHTGEKPNKCEECSRQFSHLSALKSHMRAHTGEKPYQCEECTKQFSHLSALKKHM 239
Query: 196 K 196
+
Sbjct: 240 R 240
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 11/100 (11%)
Query: 107 NNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYF 156
+ FS C K + T+ E C C KS +R + C C
Sbjct: 170 SRQFSELCNL-KHHMRTHTGEKPNKCEECSRQFSHLSALKSHMRAHTGEKPYQCEECTKQ 228
Query: 157 SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++ ++ H+RTHTGEK Y C +C+ + + L H++
Sbjct: 229 FSHLSALKKHMRTHTGEKRYKCEECSRQFSEPGNLKRHMQ 268
>gi|139947567|ref|NP_001077182.1| zinc finger protein Pegasus [Bos taurus]
gi|158513820|sp|A4IFJ6.1|IKZF5_BOVIN RecName: Full=Zinc finger protein Pegasus; AltName: Full=Ikaros
family zinc finger protein 5
gi|134025141|gb|AAI34612.1| IKZF5 protein [Bos taurus]
gi|296472538|tpg|DAA14653.1| TPA: zinc finger protein Pegasus [Bos taurus]
Length = 419
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 84 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 135
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 136 KPYKCELCSFRCSDRSNLSHHRRRKH 161
Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 78 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 130
>gi|62860102|ref|NP_001017355.1| zinc finger protein Pegasus [Xenopus (Silurana) tropicalis]
gi|89271850|emb|CAJ81303.1| zinc finger protein, subfamily 1A, 5 [Xenopus (Silurana)
tropicalis]
Length = 438
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 103 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 154
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 155 KPYKCELCSFRCSDRSNLSHHRRRKH 180
Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 97 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 149
>gi|417410588|gb|JAA51765.1| Putative homeobox transcription factor sip1, partial [Desmodus
rotundus]
Length = 424
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 89 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 140
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 141 KPYKCELCSFRCSDRSNLSHHRRRKH 166
Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 83 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 135
>gi|395842657|ref|XP_003794131.1| PREDICTED: zinc finger protein Pegasus [Otolemur garnettii]
Length = 419
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 84 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 135
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 136 KPYKCELCSFRCSDRSNLSHHRRRKH 161
Score = 43.9 bits (102), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 78 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 130
>gi|207028410|ref|NP_001125847.1| zinc finger protein Pegasus [Pongo abelii]
gi|387848952|ref|NP_001248601.1| zinc finger protein Pegasus [Macaca mulatta]
gi|427197594|ref|NP_001258769.1| zinc finger protein Pegasus [Homo sapiens]
gi|332211994|ref|XP_003255103.1| PREDICTED: zinc finger protein Pegasus isoform 1 [Nomascus
leucogenys]
gi|332211996|ref|XP_003255104.1| PREDICTED: zinc finger protein Pegasus isoform 2 [Nomascus
leucogenys]
gi|332211998|ref|XP_003255105.1| PREDICTED: zinc finger protein Pegasus isoform 3 [Nomascus
leucogenys]
gi|332212000|ref|XP_003255106.1| PREDICTED: zinc finger protein Pegasus isoform 4 [Nomascus
leucogenys]
gi|402881715|ref|XP_003904410.1| PREDICTED: zinc finger protein Pegasus isoform 1 [Papio anubis]
gi|402881717|ref|XP_003904411.1| PREDICTED: zinc finger protein Pegasus isoform 2 [Papio anubis]
gi|402881719|ref|XP_003904412.1| PREDICTED: zinc finger protein Pegasus isoform 3 [Papio anubis]
gi|403259338|ref|XP_003922174.1| PREDICTED: zinc finger protein Pegasus isoform 1 [Saimiri
boliviensis boliviensis]
gi|403259340|ref|XP_003922175.1| PREDICTED: zinc finger protein Pegasus isoform 2 [Saimiri
boliviensis boliviensis]
gi|403259342|ref|XP_003922176.1| PREDICTED: zinc finger protein Pegasus isoform 3 [Saimiri
boliviensis boliviensis]
gi|426366459|ref|XP_004050275.1| PREDICTED: zinc finger protein Pegasus isoform 1 [Gorilla gorilla
gorilla]
gi|426366461|ref|XP_004050276.1| PREDICTED: zinc finger protein Pegasus isoform 2 [Gorilla gorilla
gorilla]
gi|426366463|ref|XP_004050277.1| PREDICTED: zinc finger protein Pegasus isoform 3 [Gorilla gorilla
gorilla]
gi|426366465|ref|XP_004050278.1| PREDICTED: zinc finger protein Pegasus isoform 4 [Gorilla gorilla
gorilla]
gi|441599803|ref|XP_004087567.1| PREDICTED: zinc finger protein Pegasus [Nomascus leucogenys]
gi|74761459|sp|Q9H5V7.1|IKZF5_HUMAN RecName: Full=Zinc finger protein Pegasus; AltName: Full=Ikaros
family zinc finger protein 5
gi|10439520|dbj|BAB15512.1| unnamed protein product [Homo sapiens]
gi|51491189|emb|CAH18660.1| hypothetical protein [Homo sapiens]
gi|52545945|emb|CAH56199.1| hypothetical protein [Homo sapiens]
gi|119569677|gb|EAW49292.1| zinc finger protein, subfamily 1A, 5, isoform CRA_a [Homo sapiens]
gi|119569678|gb|EAW49293.1| zinc finger protein, subfamily 1A, 5, isoform CRA_a [Homo sapiens]
gi|119569679|gb|EAW49294.1| zinc finger protein, subfamily 1A, 5, isoform CRA_a [Homo sapiens]
gi|193783807|dbj|BAG53789.1| unnamed protein product [Homo sapiens]
gi|208966544|dbj|BAG73286.1| IKAROS family zinc finger 5 [synthetic construct]
gi|355562847|gb|EHH19441.1| hypothetical protein EGK_20145 [Macaca mulatta]
gi|355783167|gb|EHH65088.1| hypothetical protein EGM_18432 [Macaca fascicularis]
gi|380815590|gb|AFE79669.1| zinc finger protein Pegasus [Macaca mulatta]
gi|383411487|gb|AFH28957.1| zinc finger protein Pegasus [Macaca mulatta]
gi|384942178|gb|AFI34694.1| zinc finger protein Pegasus [Macaca mulatta]
Length = 419
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 84 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 135
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 136 KPYKCELCSFRCSDRSNLSHHRRRKH 161
Score = 43.9 bits (102), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 78 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 130
>gi|444729280|gb|ELW69705.1| Zinc finger protein Pegasus [Tupaia chinensis]
Length = 419
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 84 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 135
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 136 KPYKCELCSFRCSDRSNLSHHRRRKH 161
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 78 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 130
>gi|38348526|ref|NP_941046.1| zinc finger protein ZFAT isoform 2 [Mus musculus]
gi|32172725|gb|AAH53930.1| Zinc finger and AT hook domain containing [Mus musculus]
Length = 1219
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 264 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCSQCSYASAIKANLNVHLRK 313
Score = 40.0 bits (92), Expect = 0.53, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 266 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCSQCSYASAIKANLNVHLRKHTGE 317
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 318 K-FACDYCSFTCLSKGHLKVHIERVH 342
Score = 36.6 bits (83), Expect = 6.1, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 899 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTS 949
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 950 DGKQFKCTVCDYTAAQKPQLLRHMEQHASFKPFRCAHCHYSCNISGSLKRHYNRKH 1005
Score = 36.6 bits (83), Expect = 6.3, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 870 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 918
>gi|395546075|ref|XP_003774919.1| PREDICTED: zinc finger protein 711 isoform 1 [Sarcophilus harrisii]
Length = 772
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKT 198
+ + F H VC C + ++ H+RTHTGEKPY C C FR A + L H+K
Sbjct: 509 VHSKSFAH--VCVECGKGFRHPSELKKHMRTHTGEKPYHCHHCIFRCADQSNLKTHMKAK 566
Query: 199 Y 199
+
Sbjct: 567 H 567
>gi|296221403|ref|XP_002756717.1| PREDICTED: zinc finger protein Pegasus isoform 1 [Callithrix
jacchus]
gi|296221405|ref|XP_002756718.1| PREDICTED: zinc finger protein Pegasus isoform 2 [Callithrix
jacchus]
Length = 419
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 84 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 135
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 136 KPYKCELCSFRCSDRSNLSHHRRRKH 161
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 78 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 130
>gi|194865506|ref|XP_001971463.1| GG14973 [Drosophila erecta]
gi|190653246|gb|EDV50489.1| GG14973 [Drosophila erecta]
Length = 812
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C C++ +T+ EL+ H R T HK C C Y S + +R H+ HTGE
Sbjct: 349 CKLCESAFTTS-GELVRHTR----YKHTKEKPHK--CTECTYASVELTKLRRHMTCHTGE 401
Query: 174 KPYACGQCAFRSASVAGLHYHL 195
+PY C C + S + L H+
Sbjct: 402 RPYQCPHCTYASQDMFKLKRHM 423
Score = 37.0 bits (84), Expect = 4.4, Method: Composition-based stats.
Identities = 37/136 (27%), Positives = 54/136 (39%), Gaps = 20/136 (14%)
Query: 79 CKHCHSQLSHLDLLD-HCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEH-----C 132
C C S+ + + L H S + +P F P KA L ++ + C
Sbjct: 434 CDICKSRFTQSNSLKAHKLIHSVVDKPVFQCNFCPTTCGRKADLRIHIKHMHTSDVPITC 493
Query: 133 RTCKSMIRTDPFRHKF--------VCYACDYFSYNIGCMR---SHIRTHTGEKPYACGQC 181
R C + D +++K CY+C SY R SH+ H EKP+ C QC
Sbjct: 494 RRCGQQL-PDRYQYKLHVKSHEGEKCYSCKLCSYASVTQRHLASHMLIHLDEKPFHCDQC 552
Query: 182 --AFRSASVAGLHYHL 195
AFR + H +L
Sbjct: 553 PQAFRQRQLLRRHMNL 568
>gi|440912499|gb|ELR62061.1| Transcriptional repressor CTCFL [Bos grunniens mutus]
Length = 663
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ HIR+HTGE+P+ C C++ S
Sbjct: 336 TSGELVRHRRYKHTHEKPFKCSVCKYASVEASKLKRHIRSHTGERPFQCSLCSYASKDTY 395
Query: 190 GLHYHLK 196
L H++
Sbjct: 396 KLKRHMR 402
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 37/81 (45%), Gaps = 10/81 (12%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H +T K+ KF C C Y M HIRTHTGE
Sbjct: 472 CRYCPAVFHDRYT-LIQHQKTHKN-------EKKFKCGYCSYTCKQERHMTVHIRTHTGE 523
Query: 174 KPYACGQCA--FRSASVAGLH 192
KP+ C C FR + +H
Sbjct: 524 KPFICLACTKCFRQQQLLNVH 544
Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 370 KRHIRSHTGERPFQCSLCSYASKDTYKLKRHMRTHSGEKPYECHICRARFTQSGTMKMHI 429
Score = 38.1 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKTY 199
VC+ C + +R+H+ THTG +P+ CG C AF ++ H K T+
Sbjct: 298 VCHLCLKAFRTVTLLRNHVNTHTGTRPHKCGDCDMAFVTSGELVRHRRYKHTH 350
Score = 37.7 bits (86), Expect = 2.6, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 129 IEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSA 186
+E T K+ + + F C C + S I + H++ H+ EKP+ C C AFR+
Sbjct: 250 LEKPSTTKNRNKAKEVKQTFHCNFCKFTSSRISSVNRHMKIHSTEKPHVCHLCLKAFRTV 309
Query: 187 SVAGLH 192
++ H
Sbjct: 310 TLLRNH 315
>gi|363732794|ref|XP_420253.3| PREDICTED: zinc finger protein 711 [Gallus gallus]
Length = 791
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
VC C + ++ H+RTHTGEKPY C C FR A + L H+K +
Sbjct: 536 VCVECGKGFRHPSELKKHMRTHTGEKPYQCQHCVFRCADQSNLKTHIKTKH 586
Score = 37.0 bits (84), Expect = 4.1, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 42/113 (37%), Gaps = 26/113 (23%)
Query: 83 HSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTD 142
HS+ + C+ C + T PF I +LS + +L C+ CK R
Sbjct: 667 HSETHKGKKIHQCRHCDF-------KTSDPF-ILSGHILSVHTKDLPFKCKRCKRGFRQQ 718
Query: 143 PFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++ H++TH+G K Y C C + + +G H+
Sbjct: 719 TE------------------LKKHMKTHSGRKVYQCQYCEYSTTDASGFKRHV 753
>gi|338727214|ref|XP_001916512.2| PREDICTED: zinc finger protein 846 [Equus caballus]
Length = 513
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 29/58 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT FVC C N + H+RTHTGEKPY C QC +GL HL+
Sbjct: 354 MRTHTGEKPFVCKECGKAFNNSSMLNQHVRTHTGEKPYECKQCGKAFTQSSGLTTHLR 411
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 12/87 (13%)
Query: 121 LSTNLNELIEHCRTCKSM----------IRTDPFRHKFVCYACDY-FSYNIGCMRSHIRT 169
L T+ E C+ C +RT + C C F Y+ C+ H+RT
Sbjct: 410 LRTHTGEKAYECKECGKAFARSANLNMHMRTHTGEKPYKCQECGKDFRYST-CLTIHMRT 468
Query: 170 HTGEKPYACGQCAFRSASVAGLHYHLK 196
HTGEKPY C +C + L HL+
Sbjct: 469 HTGEKPYRCKECGKTFTQSSALAKHLR 495
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C + +H+RTHTGEK Y C +C A A L+ H++
Sbjct: 382 VRTHTGEKPYECKQCGKAFTQSSGLTTHLRTHTGEKAYECKECGKAFARSANLNMHMR 439
>gi|123983170|gb|ABM83326.1| zinc finger protein, subfamily 1A, 5 [synthetic construct]
gi|123997877|gb|ABM86540.1| zinc finger protein, subfamily 1A, 5 [synthetic construct]
Length = 420
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 84 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 135
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 136 KPYKCELCSFRCSDRSNLSHHRRRKH 161
Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 78 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 130
>gi|351694608|gb|EHA97526.1| Zinc finger protein Pegasus [Heterocephalus glaber]
Length = 419
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 84 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 135
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 136 KPYKCELCSFRCSDRSNLSHHRRRKH 161
Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 78 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 130
>gi|260823056|ref|XP_002603999.1| hypothetical protein BRAFLDRAFT_71712 [Branchiostoma floridae]
gi|229289324|gb|EEN60010.1| hypothetical protein BRAFLDRAFT_71712 [Branchiostoma floridae]
Length = 260
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H HTGEKPY CG+C +R+A + L H+K
Sbjct: 196 MRTHTGEKPYKCDQCDYSAAQKRHLIDHQTRHTGEKPYMCGECGYRAAQRSSLSRHMK 253
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKPY CG+C +R+A+ + L H++
Sbjct: 149 YKCDQCDYSAAQKSTLDIHLTKHTGEKPYMCGECGYRTANRSHLSKHMR 197
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
++C C Y + N + H+RTHTGEKPY C QC + +A
Sbjct: 177 YMCGECGYRTANRSHLSKHMRTHTGEKPYKCDQCDYSAA 215
Score = 43.1 bits (100), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + +H+R HTGEKPY C QC + +A + L HL K
Sbjct: 121 YMCGECGFRATFKSTLSTHMRIHTGEKPYKCDQCDYSAAQKSTLDIHLTK 170
Score = 39.7 bits (91), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
H+ HTGEKPY CG+C FR+ + L H++
Sbjct: 111 HLEKHTGEKPYMCGECGFRATFKSTLSTHMR 141
>gi|260814496|ref|XP_002601951.1| hypothetical protein BRAFLDRAFT_124601 [Branchiostoma floridae]
gi|229287254|gb|EEN57963.1| hypothetical protein BRAFLDRAFT_124601 [Branchiostoma floridae]
Length = 810
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 31/61 (50%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
KS I + C CDY + + G + H+ H EKPY CG+C FR+ + L H+
Sbjct: 77 KSNIEIHTGEKPYKCEQCDYCTASKGTLSMHMAKHISEKPYRCGECGFRTGHRSALSSHM 136
Query: 196 K 196
K
Sbjct: 137 K 137
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ CY C + + + H+ HT EKPY CG+C FR+ L H+KK
Sbjct: 678 YKCYQCAFCTSRKSALIQHMVKHTDEKPYMCGECGFRTGFKPALSKHMKK 727
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C CDY + GC+ H+ HT EKPY C QC F +A L H+
Sbjct: 734 YKCDQCDYRTARKGCLDKHMAKHTVEKPYKCDQCDFCAAKQGQLEKHI 781
Score = 43.1 bits (100), Expect = 0.071, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 17/100 (17%)
Query: 114 CIYCKAVLSTNLNELIEH-------CRTC--KSMIRTDPFRHK--------FVCYACDYF 156
C Y A ST N ++H C C ++ +++D +H + C CDY
Sbjct: 458 CDYITAFKSTLDNHKLKHANEKPYMCGECGYRTSLKSDLSKHMKIHTRQKLYKCDQCDYS 517
Query: 157 SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ G H+ HTG KP C +C +R+A L HLK
Sbjct: 518 VFRKGAFTLHMAKHTGGKPDKCEKCGYRTADKIQLSSHLK 557
Score = 42.0 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 148 FVCYACDYFSYNIGCMRSHIR-THTGEKPYACGQCAFRSASVAGLHYH 194
++C C+Y + N + HI+ HT EKPY C QC FR+A L H
Sbjct: 369 YMCGECEYTTDNQSSLTIHIKMVHTREKPYKCDQCGFRTARKGDLDTH 416
Score = 42.0 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RH+ C CDY + + +H H EKPY CG+C +R++ + L H+K
Sbjct: 452 RHQ--CDQCDYITAFKSTLDNHKLKHANEKPYMCGECGYRTSLKSDLSKHMK 501
Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C+Y + + +H++ HTGEK Y C C +R+A L H+ K
Sbjct: 594 YICTECEYRTGYQSALSNHMKKHTGEKLYKCEHCDYRTARQGYLDKHMAK 643
Score = 40.4 bits (93), Expect = 0.36, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAG 190
S ++T + C C Y + + H+ THTGEKPY CG+C A+ G
Sbjct: 243 SHMKTHTLEKPYKCDQCGYCTDKKWSLDKHVATHTGEKPYTCGKCRSDMAASDG 296
Score = 39.7 bits (91), Expect = 0.66, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 59/159 (37%), Gaps = 31/159 (19%)
Query: 61 LNLSVLLVTTIPTQNHSLCKHCH-SQLSHLDLLDH-----------CKTCSYMIRPNANN 108
+ LS L T + Q H C HC S L L +H C C Y R +
Sbjct: 550 IQLSSHLKTHLKEQKHHQCDHCDFSTLFKWRLDNHKIKHSDEKPYICTECEY--RTGYQS 607
Query: 109 TFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVC-------YACDYFSYNI- 160
S + + E + C C + K + Y CD+ Y+
Sbjct: 608 ALSNH-------MKKHTGEKLYKCEHCDYRTARQGYLDKHMAKHAVEKPYKCDWCGYSTA 660
Query: 161 --GCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
G + H+ HT +KPY C QCAF ++ + L H+ K
Sbjct: 661 RKGYLAKHMAKHTVDKPYKCYQCAFCTSRKSALIQHMVK 699
Score = 39.7 bits (91), Expect = 0.68, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 29/65 (44%)
Query: 131 HCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAG 190
H S ++ + C CDY + + H+ H EKPY CG+C FR+ +
Sbjct: 128 HRSALSSHMKIHSGEKSYKCDLCDYCTALKVQLEIHMAKHAVEKPYMCGECGFRTGDKSA 187
Query: 191 LHYHL 195
L H+
Sbjct: 188 LSTHM 192
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++S+I HTGEKPY C QC + +AS L H+ K
Sbjct: 76 IKSNIEIHTGEKPYKCEQCDYCTASKGTLSMHMAK 110
Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R P++ C C + + G + +H HTGEKP+ C +C +R+A L H++
Sbjct: 394 REKPYK----CDQCGFRTARKGDLDTHTAEHTGEKPHLCEKCGYRTADKIQLSGHMR 446
Score = 38.5 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 13/90 (14%)
Query: 118 KAVLSTNLN----ELIEHCRTCKSMIRTDPFRH--------KFVCYACDYFSYNIGCMRS 165
K+ LST++N EL +C S + D +H ++C C Y + + S
Sbjct: 185 KSALSTHMNIHTGELPHNC-DFSSARKEDSGKHLAEHNNDKPYMCGKCGYRTAYSDDLSS 243
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
H++THT EKPY C QC + + L H+
Sbjct: 244 HMKTHTLEKPYKCDQCGYCTDKKWSLDKHV 273
>gi|195393718|ref|XP_002055500.1| GJ19406 [Drosophila virilis]
gi|194150010|gb|EDW65701.1| GJ19406 [Drosophila virilis]
Length = 484
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
FVC +C Y N +R H+R+HTGE+P+ C C R S +GL H+
Sbjct: 371 FVCESCGYSCRNKETLRVHLRSHTGERPFGCKVCDKRFPSHSGLREHM 418
>gi|345787217|ref|XP_542085.3| PREDICTED: zinc finger protein 846 [Canis lupus familiaris]
Length = 479
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT +VC C N + H+RTHTGEKPY C QC +GL HL+
Sbjct: 330 VRTHTGEKPYVCKECGKAFNNSSMLNQHVRTHTGEKPYECKQCGKAFTQSSGLTTHLR 387
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 139 IRTDPFRHKFVCYACDY-FSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C F Y+ C+ H+RTHTGEKPY C +C + L HL+
Sbjct: 414 MRTHTGEKPYKCKECGKAFRYST-CLSIHMRTHTGEKPYKCKECGKTFTQSSALAKHLR 471
Score = 39.7 bits (91), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C + +H+RTHTGEK YAC +C A L+ H++
Sbjct: 358 VRTHTGEKPYECKQCGKAFTQSSGLTTHLRTHTGEKAYACKECGKAFARSTNLNMHMR 415
Score = 35.8 bits (81), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 149 VCYACDYFS--YNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
VC DY N ++ H+R HTGEKPY C +C GL H++
Sbjct: 226 VCECKDYQRTFVNQSSLKVHMRHHTGEKPYECKECGKAFTRSTGLILHMR 275
>gi|195165224|ref|XP_002023439.1| GL20360 [Drosophila persimilis]
gi|194105544|gb|EDW27587.1| GL20360 [Drosophila persimilis]
Length = 469
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
S + TD F+C C Y N +R HIR+HTGE+P+ C C R S +GL H+
Sbjct: 345 SKVHTD--EKNFICENCGYSCRNKETLRVHIRSHTGERPFGCKVCDKRFPSHSGLREHM 401
>gi|148685762|gb|EDL17709.1| mCG127375, isoform CRA_a [Mus musculus]
gi|148685763|gb|EDL17710.1| mCG127375, isoform CRA_a [Mus musculus]
Length = 419
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 84 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 135
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 136 KPYKCELCSFRCSDRSNLSHHRRRKH 161
Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 78 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 130
>gi|410976229|ref|XP_003994525.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein Pegasus [Felis
catus]
Length = 419
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 84 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 135
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 136 KPYKCELCSFRCSDRSNLSHHRRRKH 161
Score = 43.9 bits (102), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 78 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 130
>gi|291412756|ref|XP_002722639.1| PREDICTED: zinc finger protein, subfamily 1A, 5 [Oryctolagus
cuniculus]
Length = 419
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 84 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 135
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 136 KPYKCELCSFRCSDRSNLSHHRRRKH 161
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 78 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 130
>gi|355695838|gb|AES00142.1| IKAROS family zinc finger 5 [Mustela putorius furo]
Length = 428
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 94 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 145
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 146 KPYKCELCSFRCSDRSNLSHHRRRKH 171
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 88 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 140
>gi|345792906|ref|XP_853942.2| PREDICTED: zinc finger protein Pegasus [Canis lupus familiaris]
Length = 419
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 84 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 135
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 136 KPYKCELCSFRCSDRSNLSHHRRRKH 161
Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 78 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 130
>gi|345328272|ref|XP_001510594.2| PREDICTED: transcriptional repressor CTCFL [Ornithorhynchus
anatinus]
Length = 772
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ HIR+HTGE+P+ C C++ S
Sbjct: 445 TSGELVRHRRYKHTHEKPFQCTICKYASVEASKLKRHIRSHTGERPFRCRLCSYASRDTY 504
Query: 190 GLHYHLK 196
L H++
Sbjct: 505 KLKRHMR 511
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 53/125 (42%), Gaps = 20/125 (16%)
Query: 79 CKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKS 137
C HC + ++ DL H K ++ T C YC A L++H +T +
Sbjct: 551 CPHCGTMIARKSDLRVHLKNL------HSYKTTEIKCHYCSAAFHERY-LLLQHQKTHRD 603
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHL 195
+F C CDY M H RTHTGEKP++C C FR + +H+
Sbjct: 604 -------EKRFKCGDCDYACKQERHMIVHKRTHTGEKPFSCLHCNKRFRQKRLLSVHF-- 654
Query: 196 KKTYH 200
+ YH
Sbjct: 655 -RKYH 658
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 112 PF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
PF C CK S ++L H R S PFR C C Y S + ++ H+RTH
Sbjct: 462 PFQCTICKYA-SVEASKLKRHIR---SHTGERPFR----CRLCSYASRDTYKLKRHMRTH 513
Query: 171 TGEKPYACGQCAFRSASVAGLHYHL 195
+GEKPY C C + + H+
Sbjct: 514 SGEKPYECSVCQTKFTQRGTMKIHM 538
Score = 41.6 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 12/95 (12%)
Query: 107 NNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSH 166
N TF C CK S + L H + I +D H VC+ C + +R+H
Sbjct: 375 NKTFH--CDICKFTTSRQ-SSLNRHLK-----IHSDVKPH--VCHLCLKAFRSATLLRNH 424
Query: 167 IRTHTGEKPYACGQC--AFRSASVAGLHYHLKKTY 199
+ THTG KPY CG C AF ++ H K T+
Sbjct: 425 VNTHTGTKPYKCGDCTMAFVTSGELVRHRRYKHTH 459
>gi|431908254|gb|ELK11854.1| Zinc finger protein Pegasus [Pteropus alecto]
Length = 420
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 84 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 135
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 136 KPYKCELCSFRCSDRSNLSHHRRRKH 161
Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 78 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 130
>gi|31982165|ref|NP_780324.2| zinc finger protein Pegasus [Mus musculus]
gi|81913620|sp|Q8BU00.1|IKZF5_MOUSE RecName: Full=Zinc finger protein Pegasus; AltName: Full=Ikaros
family zinc finger protein 5
gi|26353260|dbj|BAC40260.1| unnamed protein product [Mus musculus]
gi|35193247|gb|AAH58537.1| IKAROS family zinc finger 5 [Mus musculus]
gi|37574016|gb|AAH48183.1| IKAROS family zinc finger 5 [Mus musculus]
gi|58477558|gb|AAH89455.1| IKAROS family zinc finger 5 [Mus musculus]
gi|74142144|dbj|BAE41131.1| unnamed protein product [Mus musculus]
Length = 419
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 84 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 135
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 136 KPYKCELCSFRCSDRSNLSHHRRRKH 161
Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 78 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 130
>gi|260795402|ref|XP_002592694.1| hypothetical protein BRAFLDRAFT_67133 [Branchiostoma floridae]
gi|229277917|gb|EEN48705.1| hypothetical protein BRAFLDRAFT_67133 [Branchiostoma floridae]
Length = 364
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C +G ++ H+RTHTGEKPY C +C+ + + + GL H+
Sbjct: 185 KNHMRTHTGEKPYSCEECSRQFSRLGHLKEHMRTHTGEKPYRCEECSRQFSQLGGLKTHM 244
Query: 196 K 196
+
Sbjct: 245 R 245
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C C S L L EH RT P+R C C +G +++H+RTHTGE
Sbjct: 199 CEECSRQFS-RLGHLKEHMRT---HTGEKPYR----CEECSRQFSQLGGLKTHMRTHTGE 250
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
KPY C +C+ + + +A L H++
Sbjct: 251 KPYRCEECSRQFSQLAHLKTHMR 273
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C +G +++H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 297 KKHMRTHTGNKPYRCEECSRLFSQLGTLKTHMRTHTGEKPYRCEECSRQFSQLVHLKKHM 356
Query: 196 K 196
+
Sbjct: 357 Q 357
Score = 40.0 bits (92), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +R+ + C C +G +++HIR+H GEKPY C +C + + + L H+
Sbjct: 45 KRHMRSHTGEKSYRCEECSKQFSQLGNLKTHIRSHKGEKPYRCEECNRQFSQLVHLKIHM 104
Query: 196 K 196
+
Sbjct: 105 R 105
Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 56/130 (43%), Gaps = 19/130 (14%)
Query: 67 LVTTIPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLN 126
L TT P + C+ C Q S L L +M ++ C C S L
Sbjct: 23 LATTKPHR----CEECSRQFSQLGNLK-----RHMRSHTGEKSYR--CEECSKQFS-QLG 70
Query: 127 ELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
L H R+ K P+R C C+ + ++ H+RTHTGEKPY C +C+ + +
Sbjct: 71 NLKTHIRSHKG---EKPYR----CEECNRQFSQLVHLKIHMRTHTGEKPYKCEECSRQFS 123
Query: 187 SVAGLHYHLK 196
+ L H++
Sbjct: 124 WLDHLKTHMR 133
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C + +++H+RTHT EKPY+C +C+ + + + L H+
Sbjct: 241 KTHMRTHTGEKPYRCEECSRQFSQLAHLKTHMRTHTSEKPYSCEKCSRQFSRLGILKKHM 300
Query: 196 K 196
+
Sbjct: 301 R 301
>gi|195135212|ref|XP_002012028.1| GI16739 [Drosophila mojavensis]
gi|193918292|gb|EDW17159.1| GI16739 [Drosophila mojavensis]
Length = 1075
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Query: 112 PFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHT 171
P C C+ V S+ + K +R+ +F C CDY + + R H+ TH
Sbjct: 944 PQCPTCQRVFSSK--------SSLKLHMRSHQADKRFKCDKCDYEANDHNAFRRHMATHR 995
Query: 172 GEKPYACGQCAFRSASVAGLHYHLKKTY 199
+K YAC C FR+ HL+K +
Sbjct: 996 EQKRYACPHCDFRAIQSTAYRIHLQKVH 1023
>gi|301791407|ref|XP_002930671.1| PREDICTED: zinc finger protein Pegasus-like [Ailuropoda
melanoleuca]
gi|281350595|gb|EFB26179.1| hypothetical protein PANDA_021176 [Ailuropoda melanoleuca]
Length = 419
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 84 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 135
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 136 KPYKCELCSFRCSDRSNLSHHRRRKH 161
Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 78 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 130
>gi|260810909|ref|XP_002600165.1| hypothetical protein BRAFLDRAFT_66673 [Branchiostoma floridae]
gi|229285451|gb|EEN56177.1| hypothetical protein BRAFLDRAFT_66673 [Branchiostoma floridae]
Length = 866
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + G + H+ HTGEKPY CG+C +R+A L H+ K
Sbjct: 96 YKCDQCDYSAAQKGSLDRHMFKHTGEKPYMCGECGYRTAVRNFLKRHMAK 145
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C C + + G + H+R HTGEKPY C QC + +A L H+
Sbjct: 68 YECEQCGFRTAKRGVLAQHMRKHTGEKPYKCDQCDYSAAQKGSLDRHM 115
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CD+ S C+ H+ HT EK Y C QC +R+AS A L H++K
Sbjct: 222 YKCDHCDFSSAWKNCLVQHMVKHTAEKGYTCDQCGYRNASKAKLSVHMRK 271
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CD+ S C+ H+ HT EK Y C QC +R+AS A L H++K
Sbjct: 400 YKCDHCDFSSAWKNCLVQHMVKHTAEKGYTCDQCGYRNASKAKLSVHMRK 449
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CD+ S C+ H+ HT EK Y C QC +R+AS A L H++K
Sbjct: 573 YKCDHCDFSSAWKNCLVQHMVKHTAEKGYTCDQCGYRNASKAKLSVHMRK 622
Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C C Y + + + H+R HTGEKPY C QC + ++ AG+ H+
Sbjct: 250 YTCDQCGYRNASKAKLSVHMRKHTGEKPYKCDQCDYSASWKAGIIQHM 297
Score = 42.4 bits (98), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+RTHTGEKP+ C QC + +A L H +
Sbjct: 657 YKCEECDYRTARKLTLVRHLRTHTGEKPFKCDQCDYSAARKYNLDRHKR 705
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+ C CDY + + H+RTHTGEKP+ C QC + +A L H
Sbjct: 484 YKCEECDYRTARKLTLVRHLRTHTGEKPFKCDQCDYSAARKYNLDRH 530
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C C Y + + + H+R HTGEKP+ C QC + ++ AG+ H+
Sbjct: 428 YTCDQCGYRNASKAKLSVHMRKHTGEKPFKCDQCDYSASWKAGIIQHM 475
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C C Y + + + H+R HTGEKP+ C QC + ++ AG+ H+
Sbjct: 601 YTCDQCGYRNASKAKLSVHMRKHTGEKPFKCDQCDYSASWKAGIIQHM 648
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
RT F+C C + + + HIR+H+GEKPY C QC F L H+
Sbjct: 705 RTHTGEKTFMCELCGFGTNKRSALSVHIRSHSGEKPYKCEQCDFSCKQKFQLKRHM 760
Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 143 PFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
PF+H ++ C C+Y + + SH+ H+G KPY C C F SA
Sbjct: 185 PFKHTGLKRYSCEQCEYTASKKSLLTSHMTKHSGAKPYKCDHCDFSSA 232
Score = 40.0 bits (92), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 143 PFR---HKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
PF+ ++ C C+Y + + SH+ H+GEKPY C C F SA
Sbjct: 364 PFKPGLKRYSCEQCEYTASKKSLLTSHMTKHSGEKPYKCDHCDFSSA 410
Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 143 PFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
PF + F C CD+ + + SH+ H+GEKPY C C F SA
Sbjct: 541 PFSY-FSCELCDFTASKKSLLTSHMTKHSGEKPYKCDHCDFSSA 583
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + ++ H+ HTGEKPY C +C F +A + H+
Sbjct: 124 YMCGECGYRTAVRNFLKRHMAKHTGEKPYKCDKCDFSAARKYNVDRHM 171
Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 28/58 (48%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CDY + + H RTHTGEK + C C F + + L H++
Sbjct: 676 LRTHTGEKPFKCDQCDYSAARKYNLDRHKRTHTGEKTFMCELCGFGTNKRSALSVHIR 733
Score = 36.2 bits (82), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 148 FVCYACDY-FSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CDY S+ G ++ H+ H+ E+PY C +C +R+A L HL+
Sbjct: 456 FKCDQCDYSASWKAGIIQ-HMVKHSSERPYKCEECDYRTARKLTLVRHLR 504
Score = 35.8 bits (81), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 148 FVCYACDY-FSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CDY S+ G ++ H+ H+ E+PY C +C +R+A L HL+
Sbjct: 629 FKCDQCDYSASWKAGIIQ-HMVKHSDERPYKCEECDYRTARKLTLVRHLR 677
>gi|260822669|ref|XP_002606724.1| hypothetical protein BRAFLDRAFT_82364 [Branchiostoma floridae]
gi|229292068|gb|EEN62734.1| hypothetical protein BRAFLDRAFT_82364 [Branchiostoma floridae]
Length = 653
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 19/120 (15%)
Query: 79 CKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
C+ C Q S L DL H +T + P+ C C S +EL K
Sbjct: 455 CEECSRQFSRLGDLKRHMRT---------HTGEKPYRCEEC----SRQFSEL----GNLK 497
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
S +RT + C C ++G ++SH+RTHTGE+PY C +C+ + + + L H++
Sbjct: 498 SHMRTHTGEKPYRCEECSRQFSDLGHLKSHMRTHTGERPYRCEECSRQFSELGNLKNHMR 557
Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 62/159 (38%), Gaps = 41/159 (25%)
Query: 79 CKHCHSQLSHL-DLLDH-----------CKTCSYMI-RPN-------ANNTFSPF-CIYC 117
C+ C Q SHL DL H C+ CS RP+ + P+ C C
Sbjct: 315 CEECSKQFSHLSDLKRHMRTHTGSKPFRCEECSRQFNRPDNLKRHMQTHTGEKPYRCEKC 374
Query: 118 ----------KAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFS 157
K L T+ E C C K +RT F C C
Sbjct: 375 SRQFSELVNLKKHLRTHTGEKPYQCDECSRQFSQLGDLKGHMRTHTGEKPFRCEECSSQF 434
Query: 158 YNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+G ++SH+ THTGEKPY C +C+ + + + L H++
Sbjct: 435 SRLGNLKSHMHTHTGEKPYRCEECSRQFSRLGDLKRHMR 473
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 55/123 (44%), Gaps = 19/123 (15%)
Query: 79 CKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELI---EHCR 133
C+ C Q S L +L +H +T + P+ C C S +E H
Sbjct: 539 CEECSRQFSELGNLKNHMRT---------HTGEKPYRCEECSKQFSGWSSEAAYAHSHRY 589
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
TC + R P+R C C G ++ H+RTHTGEKPY C +C+ + ++ L
Sbjct: 590 TC-GLTREKPYR----CEECSRQFSVPGSLKLHMRTHTGEKPYRCEECSRQFTQLSNLMV 644
Query: 194 HLK 196
H+K
Sbjct: 645 HMK 647
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C +G ++ H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 150 KKHMRTHTGEKPYRCEECCRQFSELGSLKKHMRTHTGEKPYRCEECSRQFSELGNLKTHM 209
Query: 196 K 196
+
Sbjct: 210 R 210
Score = 44.7 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C +G +++H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 66 KTHMRTHTGEKPYRCEECSKQFSTLGNLQAHMRTHTGEKPYWCEECSRQFSQLVTLKRHM 125
Score = 43.1 bits (100), Expect = 0.064, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 47/118 (39%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRP----NANNTFSPFCIYCKAVLSTNLNELIEHCRT 134
C+ C Q S L L +P + FS + K + T+ E C
Sbjct: 108 CEECSRQFSQLVTLKRHMGTHTGEKPYRCEKCSKQFSELG-HLKKHMRTHTGEKPYRCEE 166
Query: 135 C----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
C K +RT + C C +G +++H+RTHTGEKPY C +C+
Sbjct: 167 CCRQFSELGSLKKHMRTHTGEKPYRCEECSRQFSELGNLKTHMRTHTGEKPYTCEECS 224
Score = 42.0 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C + +++H+RTHTGEKPY C +C+ + +++ L H++
Sbjct: 50 YRCEECSRPFSRLDNLKTHMRTHTGEKPYRCEECSKQFSTLGNLQAHMR 98
Score = 40.4 bits (93), Expect = 0.38, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C + ++ H+RTHTGEKPY C +C+ + + ++ L H++
Sbjct: 285 YRCEECSKQFSQLCSLKGHMRTHTGEKPYRCEECSKQFSHLSDLKRHMR 333
Score = 36.6 bits (83), Expect = 6.2, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
+ K +RT + C C ++ ++ H+RTHTG KP+ C +C+ + L
Sbjct: 299 SLKGHMRTHTGEKPYRCEECSKQFSHLSDLKRHMRTHTGSKPFRCEECSRQFNRPDNLKR 358
Query: 194 HLK 196
H++
Sbjct: 359 HMQ 361
>gi|198468632|ref|XP_001354765.2| GA15261 [Drosophila pseudoobscura pseudoobscura]
gi|198146497|gb|EAL31820.2| GA15261 [Drosophila pseudoobscura pseudoobscura]
Length = 469
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
S + TD F+C C Y N +R HIR+HTGE+P+ C C R S +GL H+
Sbjct: 345 SKVHTD--EKNFICENCGYSCRNKETLRVHIRSHTGERPFGCKVCDKRFPSHSGLREHM 401
>gi|432954587|ref|XP_004085551.1| PREDICTED: zinc finger protein 84-like [Oryzias latipes]
Length = 413
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 50/119 (42%), Gaps = 17/119 (14%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKS 137
CK C S + L I + PF C CK S +L+ L K+
Sbjct: 183 CKECKKSFSRISALK--------IHTRTHTGEKPFSCNVCKKSFS-DLSYL-------KT 226
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IRT F C CD +I ++ H RTHTGEKP++C +C R L H++
Sbjct: 227 HIRTHTGEKPFSCKECDKRFISISVLKRHTRTHTGEKPFSCKECTKRFRCKTDLKRHMR 285
Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C +I ++SH RTHTGEKPY+C +C + ++ L H++
Sbjct: 321 FSCKECKRRFSHISHLKSHTRTHTGEKPYSCKECKKCFSRISALKRHMR 369
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
K RT F C C ++ ++SHIRTHTGEKP++C +C
Sbjct: 85 KRHTRTHTGEKPFSCKECKKSFTDLSYLKSHIRTHTGEKPFSCKEC 130
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Query: 112 PF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
PF C CK T+L+ L KS IRT F C C I ++ H RTH
Sbjct: 96 PFSCKECKKSF-TDLSYL-------KSHIRTHTGEKPFSCKECTKCFSRIFALKRHTRTH 147
Query: 171 TGEKPYACGQC 181
TGEKP++C +C
Sbjct: 148 TGEKPFSCKEC 158
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT F C C I ++ H RTHTGEKP++C C + ++ L H+
Sbjct: 169 KTHMRTHTGEKPFSCKECKKSFSRISALKIHTRTHTGEKPFSCNVCKKSFSDLSYLKTHI 228
Query: 196 K 196
+
Sbjct: 229 R 229
Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 14/102 (13%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCR--TCK 136
CK C + SH+ L S+ +S C CK S ++ L H R T +
Sbjct: 323 CKECKRRFSHISHLK-----SHTRTHTGEKPYS--CKECKKCFS-RISALKRHMRGHTGE 374
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAC 178
+ I+ PF C C+ I +++H+RTHTGEK ++C
Sbjct: 375 NHIQEKPF----SCKECNKSFRQISHLKTHMRTHTGEKLFSC 412
>gi|348587174|ref|XP_003479343.1| PREDICTED: zinc finger protein Pegasus-like [Cavia porcellus]
Length = 418
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 84 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 135
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 136 KPYKCELCSFRCSDRSNLSHHRRRKH 161
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 78 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 130
>gi|260815781|ref|XP_002602651.1| hypothetical protein BRAFLDRAFT_81931 [Branchiostoma floridae]
gi|229287962|gb|EEN58663.1| hypothetical protein BRAFLDRAFT_81931 [Branchiostoma floridae]
Length = 324
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 11/112 (9%)
Query: 87 SHLD--LLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPF 144
SHLD L H YM + C C + ++ L EH RT P+
Sbjct: 191 SHLDNHLAKHAGAKPYMCEQCGGDKLY-ICDQC-GYRTAQMSHLSEHMRT---HTGGKPY 245
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C+Y + + HI+ HTGEKPY CG+C +R+A L H++
Sbjct: 246 K----CGHCNYSAALKSTLAKHIKQHTGEKPYMCGECGYRTAKKRNLSQHMR 293
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + +H+RTHTGEKPY CGQC + + + L HL K
Sbjct: 150 YICGECGYRTVRKFYLSTHMRTHTGEKPYKCGQCNYSARRKSHLDNHLAK 199
Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+RTHTG KPY CG C + +A + L H+K+
Sbjct: 217 YICDQCGYRTAQMSHLSEHMRTHTGGKPYKCGHCNYSAALKSTLAKHIKQ 266
Score = 43.5 bits (101), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A + L+ L K
Sbjct: 94 YICGECGYKTVRKSHLSQHMRTHTGEKPYKCNQCDYSAALKSSLNQQLAK 143
Score = 42.7 bits (99), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY CG+C +R+A L H++
Sbjct: 1 MRTHTGEKPYKCDQCDYSAALKSSLDHHLVKHTGEKPYICGECGYRTARKCYLIQHMR 58
Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+RTHTGEKP+ C QC + +A + L H K
Sbjct: 273 YMCGECGYRTAKKRNLSQHMRTHTGEKPFLCDQCGYSAALKSTLSNHCK 321
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 167 IRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RTHTGEKPY C QC + +A + L +HL K
Sbjct: 1 MRTHTGEKPYKCDQCDYSAALKSSLDHHLVK 31
>gi|182888575|ref|NP_001116837.1| transcriptional repressor CTCFL [Bos taurus]
gi|171474907|gb|ACB47394.1| brother of regulator of imprinted sites [Bos taurus]
gi|296480985|tpg|DAA23100.1| TPA: CCCTC-binding factor (zinc finger protein)-like [Bos taurus]
Length = 631
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 37/81 (45%), Gaps = 10/81 (12%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H +T K+ KF C C Y M HIRTHTGE
Sbjct: 440 CRYCPAVFHDRYT-LIQHQKTHKN-------EKKFKCGYCSYVCKQERHMTVHIRTHTGE 491
Query: 174 KPYACGQCA--FRSASVAGLH 192
KP+ C C FR + +H
Sbjct: 492 KPFICLACTKCFRQQQLLNVH 512
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ HIR+HTGE+P+ C C++ S
Sbjct: 304 TSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHIRSHTGERPFQCSLCSYASKDTY 363
Query: 190 GLHYHLK 196
L H++
Sbjct: 364 KLKRHMR 370
Score = 45.1 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 338 KRHIRSHTGERPFQCSLCSYASKDTYKLKRHMRTHSGEKPYECHICRARFTQSGTMKMHI 397
Score = 37.7 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKTY 199
VC+ C + +R+H+ THTG +P+ CG C AF ++ H K T+
Sbjct: 266 VCHLCLKAFRTVTLLRNHVNTHTGTRPHKCGDCDMAFVTSGELVRHRRYKHTH 318
Score = 37.7 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 129 IEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSA 186
+E T K+ + + F C C + S I + H++ H+ EKP+ C C AFR+
Sbjct: 218 LEKPSTTKNRNKAKEVKQTFHCNFCKFTSSRISSVNRHMKIHSTEKPHVCHLCLKAFRTV 277
Query: 187 SVAGLH 192
++ H
Sbjct: 278 TLLRNH 283
>gi|431908055|gb|ELK11658.1| Zinc finger protein ZFAT [Pteropus alecto]
Length = 985
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 261 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 310
Score = 40.0 bits (92), Expect = 0.47, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 263 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 314
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K ++C CAF S L H+++ +
Sbjct: 315 K-FSCDYCAFTCLSKGHLKVHIERVH 339
Score = 37.4 bits (85), Expect = 3.8, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 46/117 (39%), Gaps = 24/117 (20%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 686 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 736
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+F C CDY + + H+ H KP+ C C + S +++G LK+ Y+
Sbjct: 737 DGKQFKCTVCDYTAAQRPQLLRHMEQHASFKPFRCAHCHY-SCNISG---SLKRHYN 789
Score = 37.0 bits (84), Expect = 4.0, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 657 CPYCDFYFMQNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 705
>gi|74150370|dbj|BAE32231.1| unnamed protein product [Mus musculus]
Length = 419
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 84 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 135
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 136 KPYKCELCSFRCSDRSNLSHHRRRKH 161
Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 78 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 130
>gi|260809011|ref|XP_002599300.1| hypothetical protein BRAFLDRAFT_113547 [Branchiostoma floridae]
gi|229284577|gb|EEN55312.1| hypothetical protein BRAFLDRAFT_113547 [Branchiostoma floridae]
Length = 681
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 55/124 (44%), Gaps = 25/124 (20%)
Query: 78 LCKHCH---SQLSHLD--LLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHC 132
+C HC +Q S+LD LL H SYM C +C S+ +L H
Sbjct: 1 MCDHCDYSATQKSNLDRHLLKHTGRKSYM------------CNHCDYSTSSKF-QLDRH- 46
Query: 133 RTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLH 192
+R + C CDY + + H+ HTGEKPY CG+C +R+A + L
Sbjct: 47 ------VRKHTGEKPYKCDQCDYSAALKTTLNQHLAKHTGEKPYMCGECGYRAAKKSHLS 100
Query: 193 YHLK 196
H+K
Sbjct: 101 QHMK 104
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C CD+ S + + H+ THTGEKPY CG+C +R+A + L H+
Sbjct: 157 KNHMRTHMGVKPYKCDQCDFSSAHKCSLDKHLATHTGEKPYMCGECGYRAAQKSSLSRHM 216
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++T + C CDY + + H+ HTGEKPY CG+C FR+A L H +
Sbjct: 500 MKTHTGKKPHKCEHCDYSAAAKASLDIHMAKHTGEKPYLCGECGFRTAKKGDLSRHRR 557
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
R ++C CDY + + + H+R HTGEKPY C QC + +A L+ HL K
Sbjct: 25 RKSYMCNHCDYSTSSKFQLDRHVRKHTGEKPYKCDQCDYSAALKTTLNQHLAK 77
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + + C CDY + + H+ H GEKPY CG+C +R+A + L H+
Sbjct: 272 MRTHTGQKPYKCDQCDYSAAQKCHLDQHLAKHMGEKPYMCGECGYRTAWKSNLSRHM 328
Score = 43.1 bits (100), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RT + C CDY + + H HTGEKPY CG+C +R+ L+ H +
Sbjct: 389 RTHTGEKPYKCDQCDYSAQQKDSLDMHQAKHTGEKPYMCGECGYRTRHRQSLYLHKR 445
Score = 42.4 bits (98), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTG+KPY C QC + +A L HL K
Sbjct: 253 YMCGECGYRAARKYHLSRHMRTHTGQKPYKCDQCDYSAAQKCHLDQHLAK 302
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
C CD+ + + H+ HTGEKPY CG+C +R+A L H++
Sbjct: 227 CDQCDFSAAEKFMLDQHLMKHTGEKPYMCGECGYRAARKYHLSRHMR 273
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ VC C Y + + + H++THTG+KP+ C C + +A+ A L H+ K
Sbjct: 480 RHVCEECGYSTGDRSSLYRHMKTHTGKKPHKCEHCDYSAAAKASLDIHMAK 530
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CDY + + H+ HTGEKPY C +C +R+A + L H++
Sbjct: 565 FKCDQCDYSAAQKYNLDIHLANHTGEKPYVCWECGYRTAIRSNLTRHIR 613
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C + + + + H RTHTGEKPY C QC + + L H K
Sbjct: 369 FICVECGFTTRHRYALTRHKRTHTGEKPYKCDQCDYSAQQKDSLDMHQAK 418
Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+C C Y ++ +++H+RTH G KPY C QC F SA L HL
Sbjct: 142 MCGKCGYSTHLKSNLKNHMRTHMGVKPYKCDQCDFSSAHKCSLDKHL 188
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+ HTGEKPY C QC + +A L+ HL K
Sbjct: 309 YMCGECGYRTAWKSNLSRHMVVHTGEKPYKCDQCDYSAAQKCHLYQHLAK 358
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + SH+ HTGEK + C +C + + + L+ H+K
Sbjct: 453 YKCNLCDYSAAQKAALNSHMARHTGEKRHVCEECGYSTGDRSSLYRHMK 501
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ---CAFRSASV 188
+VC+ C Y + + HIR HTGEKP+ C + CAF+ +S+
Sbjct: 593 YVCWECGYRTAIRSNLTRHIRVHTGEKPFKCEECDYCAFKKSSL 636
Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + + H RTHTG KPY C C + +A A L+ H+
Sbjct: 425 YMCGECGYRTRHRQSLYLHKRTHTGVKPYKCNLCDYSAAQKAALNSHM 472
Score = 36.6 bits (83), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+ HTG+KP+ C QC F +A L HL K
Sbjct: 197 YMCGECGYRAAQKSSLSRHMVVHTGQKPHKCDQCDFSAAEKFMLDQHLMK 246
>gi|149689610|ref|XP_001490314.1| PREDICTED: zinc finger protein Pegasus [Equus caballus]
Length = 419
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 84 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 135
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 136 KPYKCELCSFRCSDRSNLSHHRRRKH 161
Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 78 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 130
>gi|260832604|ref|XP_002611247.1| hypothetical protein BRAFLDRAFT_207303 [Branchiostoma floridae]
gi|229296618|gb|EEN67257.1| hypothetical protein BRAFLDRAFT_207303 [Branchiostoma floridae]
Length = 140
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + G + H HTGEKPY CG+C +R+A + L H+++
Sbjct: 28 YECDQCDYSTAHKGNLDRHKAKHTGEKPYICGECGYRTAHKSKLSIHIRR 77
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
IR + C CDY S + H+ HTGEKP+ CG+C +R+A + L H+++
Sbjct: 75 IRRHTGEKPYKCNHCDYSSVRKSDLDRHMLKHTGEKPFMCGECGYRTADRSSLTIHMRR 133
Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + + HIR HTGEKPY C C + S + L H+
Sbjct: 56 YICGECGYRTAHKSKLSIHIRRHTGEKPYKCNHCDYSSVRKSDLDRHM 103
Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C Y + + + H+R HTG KPY C QC + +A L H K
Sbjct: 1 MCGECGYRTADRSVLTVHMRRHTGVKPYECDQCDYSTAHKGNLDRHKAK 49
>gi|260819198|ref|XP_002604924.1| hypothetical protein BRAFLDRAFT_217118 [Branchiostoma floridae]
gi|229290253|gb|EEN60934.1| hypothetical protein BRAFLDRAFT_217118 [Branchiostoma floridae]
Length = 311
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 105 NANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCM 163
N++N P C C T+ EL+ H + T HK C CDY S I +
Sbjct: 56 NSHNGVKPHKCDQCPMSFVTS-GELMRH----RRYKHTHEKPHK--CTMCDYASVEISKL 108
Query: 164 RSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ H+R+HTGE+P+ CG C++ S L H++
Sbjct: 109 KRHMRSHTGERPFQCGMCSYASPDSYKLKRHMR 141
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +R+ F C C Y S + ++ H+RTHTGEKPY C C L H+
Sbjct: 109 KRHMRSHTGERPFQCGMCSYASPDSYKLKRHMRTHTGEKPYECSVCLATFTQSGSLKMHM 168
Query: 196 KK 197
++
Sbjct: 169 QR 170
Score = 39.7 bits (91), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ CY CDY + + H++ HT E+P+ CG C ++ L H+
Sbjct: 8 YQCYKCDYTCQRMAFLERHMKVHTDERPFKCGTCEREFRTMQSLQNHI 55
Score = 36.2 bits (82), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 10/81 (12%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC + N L +H ++T +F C C+Y + +H R HTGE
Sbjct: 209 CKYCDSAFPDKYN-LTKH-------LKTHQGEKRFRCEDCNYCCTQERHLINHKRCHTGE 260
Query: 174 KPYACGQC--AFRSASVAGLH 192
KP+ C QC FR + H
Sbjct: 261 KPFVCVQCDHTFRQEQLLKQH 281
>gi|111550156|gb|ABH10100.1| BORIS transcription factor transcript variant C8 [Homo sapiens]
Length = 451
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 324 TSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 383
Query: 190 GLHYHLK 196
L H++
Sbjct: 384 KLKRHMR 390
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +R+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 358 KRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEKPYECHICHTRFTQSGTMKIHI 417
>gi|260790752|ref|XP_002590405.1| hypothetical protein BRAFLDRAFT_201071 [Branchiostoma floridae]
gi|229275598|gb|EEN46416.1| hypothetical protein BRAFLDRAFT_201071 [Branchiostoma floridae]
Length = 408
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 21/117 (17%)
Query: 95 CKTCSYMIRPN--------ANNTFSPF-CIYC--KAVLSTNLNELIEHCRTCKSMIRTDP 143
C+ C YM R + PF C C K +NL +E T
Sbjct: 299 CEKCGYMTRYKCALVSHMATHMQDKPFKCGKCDYKTAWKSNLRGHME----------THT 348
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R +F C CD+ + +R+H++THTG+K + C +C FR+A + H++ +H
Sbjct: 349 GRKRFCCEKCDFKASWKSNLRAHMKTHTGQKTFCCEECDFRTAWKSSFKKHVESHWH 405
Score = 36.2 bits (82), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
+C C Y + M H++THTG+K +A G C R+A + L
Sbjct: 5 ICGVCGYRTQQKNTMAMHMKTHTGQKRFASGGCDLRTAQKSKL 47
>gi|195480216|ref|XP_002101182.1| GE15763 [Drosophila yakuba]
gi|194188706|gb|EDX02290.1| GE15763 [Drosophila yakuba]
Length = 465
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
FVC +C Y N +R HIR+HTGE+P+ C C R S +GL H+
Sbjct: 352 FVCESCGYSCRNKETLRVHIRSHTGERPFGCQVCDKRFPSHSGLREHM 399
>gi|147904332|ref|NP_001084918.1| zinc finger protein Pegasus [Xenopus laevis]
gi|82237125|sp|Q6NRM0.1|IKZF5_XENLA RecName: Full=Zinc finger protein Pegasus; AltName: Full=Ikaros
family zinc finger protein 5
gi|47123051|gb|AAH70727.1| Ikzf5 protein [Xenopus laevis]
Length = 453
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 103 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 154
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 155 KPYKCELCSFRCSDRSNLSHHRRRKH 180
Score = 43.5 bits (101), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 97 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 149
>gi|121247376|ref|NP_033597.2| zinc finger Y-chromosomal protein 2 [Mus musculus]
gi|182636952|sp|P20662.2|ZFY2_MOUSE RecName: Full=Zinc finger Y-chromosomal protein 2
gi|74223366|dbj|BAE21566.1| unnamed protein product [Mus musculus]
gi|148706206|gb|EDL38153.1| mCG118764, isoform CRA_a [Mus musculus]
gi|148706207|gb|EDL38154.1| mCG118764, isoform CRA_a [Mus musculus]
gi|148706208|gb|EDL38155.1| mCG118764, isoform CRA_a [Mus musculus]
gi|162317904|gb|AAI56681.1| Zinc finger protein 2, Y linked [synthetic construct]
Length = 777
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 145 RHKF--VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
R KF +C C + ++ HIR HTGEKPY C C ++SA + L H+K +
Sbjct: 515 RKKFPHICGECGKGFRHPSALKKHIRVHTGEKPYECQYCEYKSADSSNLKTHIKSKH 571
>gi|301774102|ref|XP_002922470.1| PREDICTED: zinc finger protein ZFAT-like [Ailuropoda melanoleuca]
Length = 1113
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 333 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 382
Score = 40.0 bits (92), Expect = 0.50, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 335 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 386
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 387 K-FACDYCSFTCLSKGHLKVHIERVH 411
Score = 37.0 bits (84), Expect = 4.6, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 938 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 986
>gi|260814498|ref|XP_002601952.1| hypothetical protein BRAFLDRAFT_86436 [Branchiostoma floridae]
gi|229287255|gb|EEN57964.1| hypothetical protein BRAFLDRAFT_86436 [Branchiostoma floridae]
Length = 398
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + HI HTGEKPY CG+C FR+A + L H+K
Sbjct: 203 YKCDQCDYCTDSKWRFNEHIARHTGEKPYMCGKCGFRTADKSYLSRHMK 251
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 135 CKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAG 190
C+ + FRH + C CDY + +++H+ HTGEKPY C +C FR+A +
Sbjct: 270 CRQYWKKHMFRHTGEKPYKCEQCDYCTAFKQALKTHMTKHTGEKPYMCEKCGFRTAHKSY 329
Query: 191 LHYHLKK 197
L H+K+
Sbjct: 330 LSRHMKR 336
Score = 43.1 bits (100), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 151 YACDYFSY---NIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
Y C+ F + + + +H+ HTGEKPY CG+C FR+ + L H+K
Sbjct: 44 YNCEQFDFCTASKETLDTHMAKHTGEKPYTCGECGFRTGYQSALSSHMK 92
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ H GEKPY CG+C +++ + L H+K
Sbjct: 100 YKCDQCDYCTALKEHLERHMAIHAGEKPYMCGECGYKTGEKSALSKHMK 148
Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
++C C + + + + H++THTGEKPY C QC F +A
Sbjct: 231 YMCGKCGFRTADKSYLSRHMKTHTGEKPYNCDQCDFSTA 269
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + G + H+ THTGEK CG+C +R+ L H+K
Sbjct: 345 YKCDQCDYGTNKEGRLEQHMVTHTGEK--LCGKCGYRTYDRDDLFSHMK 391
Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 151 YACDYFSYNIGC---MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
Y CD ++ C + H+ HTGEKPY C QC + +A L H+ K
Sbjct: 259 YNCDQCDFSTACRQYWKKHMFRHTGEKPYKCEQCDYCTAFKQALKTHMTK 308
>gi|195492532|ref|XP_002094032.1| GE20419 [Drosophila yakuba]
gi|194180133|gb|EDW93744.1| GE20419 [Drosophila yakuba]
Length = 813
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C C++ +T+ EL+ H R T HK C C Y S + +R H+ HTGE
Sbjct: 350 CKLCESAFTTS-GELVRHTR----YKHTKEKPHK--CTECTYASVELTKLRRHMTCHTGE 402
Query: 174 KPYACGQCAFRSASVAGLHYHL 195
+PY C C + S + L H+
Sbjct: 403 RPYQCPHCTYASQDMFKLKRHM 424
Score = 36.6 bits (83), Expect = 6.6, Method: Composition-based stats.
Identities = 37/136 (27%), Positives = 54/136 (39%), Gaps = 20/136 (14%)
Query: 79 CKHCHSQLSHLDLLD-HCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEH-----C 132
C C S+ + + L H S + +P F P KA L ++ + C
Sbjct: 435 CDICKSRFTQSNSLKAHKLIHSVVDKPVFQCNFCPTTCGRKADLRIHIKHMHTSDVPITC 494
Query: 133 RTCKSMIRTDPFRHKF--------VCYACDYFSYNIGCMR---SHIRTHTGEKPYACGQC 181
R C + D +++K CY+C SY R SH+ H EKP+ C QC
Sbjct: 495 RRCGQQL-PDRYQYKLHVKSHEGEKCYSCKLCSYASVTQRHLASHMLIHLDEKPFHCEQC 553
Query: 182 --AFRSASVAGLHYHL 195
AFR + H +L
Sbjct: 554 PQAFRQRQLLRRHMNL 569
>gi|432953639|ref|XP_004085425.1| PREDICTED: oocyte zinc finger protein XlCOF7.1-like, partial
[Oryzias latipes]
Length = 263
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT F C C N+ +++H+RTHTGEKPY+C +C ++V+ L H+
Sbjct: 194 KTHMRTHTGEKPFSCKDCKKSFSNVSNLKTHMRTHTGEKPYSCKECKKSFSNVSNLKTHM 253
Query: 196 K 196
+
Sbjct: 254 R 254
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT F C CD + ++ H+RTHTGEKPY+C +C ++V L H+
Sbjct: 110 KTHMRTHTGEKPFSCKECDKSFSQLPHLQKHMRTHTGEKPYSCKECKKSFSNVFNLKTHM 169
Query: 196 K 196
+
Sbjct: 170 R 170
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
M R D H F C C + ++SH+ THTGEKP+ C +C + + L H++
Sbjct: 1 MKRRD-RSHPFSCKECKKSFSRVSHLKSHMSTHTGEKPFTCKECRKGFSESSSLKKHMR 58
Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 9/67 (13%)
Query: 112 PF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
PF C CK S N++ L H +RT + C C N+ +++H+RTH
Sbjct: 205 PFSCKDCKKSFS-NVSNLKTH-------MRTHTGEKPYSCKECKKSFSNVSNLKTHMRTH 256
Query: 171 TGEKPYA 177
TGEKP++
Sbjct: 257 TGEKPFS 263
>gi|344273069|ref|XP_003408349.1| PREDICTED: zinc finger protein ZFAT [Loxodonta africana]
Length = 1271
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 299 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 348
Score = 40.4 bits (93), Expect = 0.42, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 301 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 352
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 353 K-FACDACSFTCLSKGHLKVHIERVH 377
Score = 37.4 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 46/117 (39%), Gaps = 24/117 (20%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 939 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 989
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+F C CDY + + H+ H KP+ C C + S +++G LK+ Y+
Sbjct: 990 DGKQFKCTVCDYTAAQKPQLLRHMEQHASFKPFRCAHCHY-SCNISG---SLKRHYN 1042
Score = 37.0 bits (84), Expect = 4.6, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 910 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 958
>gi|149631847|ref|XP_001510537.1| PREDICTED: zinc finger protein Pegasus [Ornithorhynchus anatinus]
Length = 419
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 84 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 135
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 136 KPYKCELCSFRCSDRSNLSHHRRRKH 161
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 78 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 130
>gi|260793940|ref|XP_002591968.1| hypothetical protein BRAFLDRAFT_220962 [Branchiostoma floridae]
gi|229277181|gb|EEN47979.1| hypothetical protein BRAFLDRAFT_220962 [Branchiostoma floridae]
Length = 284
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + N + H+RTHTGEKPY C QC F +A + L HL
Sbjct: 121 YMCGKCGYRTANKSHLAEHMRTHTGEKPYKCDQCDFSAAHKSNLDQHL 168
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 119 AVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAC 178
+T ++L +H +RT + C CDY + + SH+ H GEKPY C
Sbjct: 183 GYRTTRKSQLSDH-------MRTHTGEKPYKCDQCDYSAATKSTLDSHLAKHRGEKPYMC 235
Query: 179 GQCAFRSASVAGLHYHLK 196
G+C +R+ + L H++
Sbjct: 236 GECGYRATQKSHLSKHMR 253
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A+ + L HL K
Sbjct: 177 YMCGECGYRTTRKSQLSDHMRTHTGEKPYKCDQCDYSAATKSTLDSHLAK 226
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KPY CG+C +R+A+ + L H++
Sbjct: 84 MRTHTGEKPYKCNHCDYSAIQKSNLDQHLAKHTGDKPYMCGKCGYRTANKSHLAEHMR 141
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+RTHTGEKPY C QC + + + L+ H K
Sbjct: 233 YMCGECGYRATQKSHLSKHMRTHTGEKPYKCDQCDYSATDKSALNKHCK 281
Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 119 AVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAC 178
+ N + L EH +RT + C CD+ + + + H+ HTG+KPY C
Sbjct: 127 GYRTANKSHLAEH-------MRTHTGEKPYKCDQCDFSAAHKSNLDQHLAIHTGDKPYMC 179
Query: 179 GQCAFRSASVAGLHYHLK 196
G+C +R+ + L H++
Sbjct: 180 GECGYRTTRKSQLSDHMR 197
Score = 43.5 bits (101), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ H GEKPY CG+C +R+A + L H++
Sbjct: 28 MRTHTGEKPYKCDHCDYSAAQKYNLNQHLAIHIGEKPYMCGECGYRTAKTSHLANHMR 85
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + +H+RTHTGEKPY C C + + + L HL K
Sbjct: 65 YMCGECGYRTAKTSHLANHMRTHTGEKPYKCNHCDYSAIQKSNLDQHLAK 114
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGEKPY C C + +A L+ HL
Sbjct: 9 YICGECGYRAAYKSYLSRHMRTHTGEKPYKCDHCDYSAAQKYNLNQHL 56
>gi|260805202|ref|XP_002597476.1| hypothetical protein BRAFLDRAFT_80515 [Branchiostoma floridae]
gi|229282741|gb|EEN53488.1| hypothetical protein BRAFLDRAFT_80515 [Branchiostoma floridae]
Length = 1097
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 118 KAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHI 167
K L T+ E C C KS +RT ++C C + ++SHI
Sbjct: 101 KTHLRTHTGEKPYRCEECSKQFSRLGHLKSHMRTHTGEKPYMCEECSRQFSRLDSLKSHI 160
Query: 168 RTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RTHTGEKPY C +C+ + + L+ H++
Sbjct: 161 RTHTGEKPYRCEECSKQFCRLDSLNTHIR 189
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
KS +RT + + C C +G +R+H+RTHTG+KPY C +C+ + + + L H+
Sbjct: 606 KSHMRTHSGQKPYKCEVCTRQFSELGALRTHMRTHTGKKPYRCEECSRQFSQLGHLTTHM 665
Query: 196 K 196
+
Sbjct: 666 R 666
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C AC +G ++ H+RTHTGEKPY C +C+ + + + L H++
Sbjct: 356 VRTHTGEKPYQCEACSRHFSELGSLKRHMRTHTGEKPYRCEECSRQFSHLGDLKSHMR 413
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 19/120 (15%)
Query: 79 CKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
C+ C Q S + DL H +T S P+ C C S L L H RT
Sbjct: 592 CEECRRQFSRMGDLKSHMRTHSGQ---------KPYKCEVCTRQFS-ELGALRTHMRTHT 641
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C C +G + +H+RTHTGEKPY C +C + + ++ L H++
Sbjct: 642 G---KKPYR----CEECSRQFSQLGHLTTHMRTHTGEKPYKCEECCRQFSVLSNLKTHMR 694
Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 38/133 (28%), Positives = 57/133 (42%), Gaps = 17/133 (12%)
Query: 79 CKHCHSQLSHL-DLLDHCKTCSYMIRP----NANNTFSPFCIYCKAVLSTNLNELIEHCR 133
C C Q S L DL H +T + +P + FS + K+ + T+ E C
Sbjct: 87 CDECSRQFSQLGDLKTHLRTHTGE-KPYRCEECSKQFSRLG-HLKSHMRTHTGEKPYMCE 144
Query: 134 TC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
C KS IRT + C C + + +HIRTHTGEKPY C +C
Sbjct: 145 ECSRQFSRLDSLKSHIRTHTGEKPYRCEECSKQFCRLDSLNTHIRTHTGEKPYRCEECNR 204
Query: 184 RSASVAGLHYHLK 196
+ + ++ H++
Sbjct: 205 QFSKLSDFKRHMR 217
Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C +G +++H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 73 KRHMRTHTGEKSYRCDECSRQFSQLGDLKTHLRTHTGEKPYRCEECSKQFSRLGHLKSHM 132
Query: 196 K 196
+
Sbjct: 133 R 133
Score = 45.1 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C+ CS FS C+ K + T+ E C C K+ ++T
Sbjct: 991 CEECS--------RQFSELCVLKKHI-RTHTGEKPYRCEECSKQFSQLSHLKTHMQTHTG 1041
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ C C + + +H+RTHTGEKPY C +C+ + + + L H+ +T+H
Sbjct: 1042 EKPYRCEECSRQFSKLSNLETHMRTHTGEKPYRCEECSRQFSQLGNLKKHM-ETHH 1096
Score = 44.7 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 131 HCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAG 190
H KS +RT + C C ++G ++SH+RTHTG+KPY C +C+ + + ++
Sbjct: 404 HLGDLKSHMRTHTGEKHYRCEECSRQFSHLGDLKSHMRTHTGKKPYRCEECSRQFSQLSD 463
Query: 191 LHYHL 195
L +
Sbjct: 464 LKRQM 468
Score = 43.9 bits (102), Expect = 0.036, Method: Composition-based stats.
Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 17/133 (12%)
Query: 79 CKHCHSQLSHLDLLD-HCKTCSYMIRP----NANNTFSPFCIYCKAVLSTNLNELIEHCR 133
C+ C Q LD L+ H +T + +P N FS + K + + E C
Sbjct: 171 CEECSKQFCRLDSLNTHIRTHTGE-KPYRCEECNRQFSKLSDF-KRHMRAHTGEKPYRCE 228
Query: 134 TC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
C K +RT + C C +G ++ HIRTHTGEK Y C +C+
Sbjct: 229 ECSKQFSKLSNLKRHMRTHTGEKLYRCEECSRQFSQLGDLKRHIRTHTGEKLYRCEECSR 288
Query: 184 RSASVAGLHYHLK 196
+ + ++ L H++
Sbjct: 289 QFSKLSNLERHMR 301
Score = 43.9 bits (102), Expect = 0.038, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 17/119 (14%)
Query: 79 CKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKS 137
C+ C Q S L DL H +T + + C C S L+ L H RT
Sbjct: 255 CEECSRQFSQLGDLKRHIRTHT------GEKLYR--CEECSRQFS-KLSNLERHMRTHTG 305
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C C +G ++ H+R+HTGEKPY C +C+ + + + L H++
Sbjct: 306 ---EKPYR----CEECSRQFSRLGDLKKHMRSHTGEKPYRCEECSRQFSQQSSLEKHVR 357
Score = 42.7 bits (99), Expect = 0.091, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R D + C C +G ++ H+R+HTGEKPY+C +C+ + + + L H++
Sbjct: 836 RRDKGVRVYRCEECSKQFSQLGHLKKHMRSHTGEKPYSCEECSRQFSRLDSLKTHMR 892
Score = 40.0 bits (92), Expect = 0.50, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 17/105 (16%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKS 137
C+ C Q S LD L ++M A+ P+ C C N K+
Sbjct: 874 CEECSRQFSRLDSLK-----THM---RAHTGEKPYRCEDC--------NRQFSEQDALKT 917
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
+RT + C C + +++H+R HTGEKPY C +C+
Sbjct: 918 HMRTHTAEKPYRCEECSRQFSRLDSLKTHMRAHTGEKPYRCEECS 962
Score = 40.0 bits (92), Expect = 0.58, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C Q S L L +M +S C C S L+ L H R +
Sbjct: 846 CEECSKQFSQLGHLK-----KHMRSHTGEKPYS--CEECSRQFS-RLDSLKTHMR---AH 894
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C C+ +++H+RTHT EKPY C +C+ + + + L H++
Sbjct: 895 TGEKPYR----CEDCNRQFSEQDALKTHMRTHTAEKPYRCEECSRQFSRLDSLKTHMR 948
Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R D + C C + ++ H+RTHTGEK Y C +C+ + + + L HL+
Sbjct: 49 RRDKGVRVYRCEECSKEFSKLSNLKRHMRTHTGEKSYRCDECSRQFSQLGDLKTHLR 105
Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 30/61 (49%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K ++T + C C + ++ H+RTHT EKPY C +C+ + + L H+
Sbjct: 718 KRHMQTHTEEKPYRCEDCSRQFNTLSSLKRHMRTHTKEKPYRCEECSRQFSQSGNLKTHM 777
Query: 196 K 196
+
Sbjct: 778 R 778
Score = 38.1 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 19/100 (19%)
Query: 79 CKHCHSQLSHLDLLD-HCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
C+ C Q S L +L H +T + P+ C C +T L+ L H RT
Sbjct: 704 CEECSRQFSQLSVLKRHMQT---------HTEEKPYRCEDCSRQFNT-LSSLKRHMRT-- 751
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY 176
+ P+R C C G +++H+RTHTGEKPY
Sbjct: 752 -HTKEKPYR----CEECSRQFSQSGNLKTHMRTHTGEKPY 786
>gi|260823164|ref|XP_002604053.1| hypothetical protein BRAFLDRAFT_119781 [Branchiostoma floridae]
gi|229289378|gb|EEN60064.1| hypothetical protein BRAFLDRAFT_119781 [Branchiostoma floridae]
Length = 1324
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGE PY CG+C +++A A L H++
Sbjct: 408 YKCDQCDYTVAHKSSLNDHMLKHTGENPYKCGECGYKTAKKANLFRHMR 456
Score = 47.0 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 143 PFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C C Y + + H++ HTGEKP+ CG+C +R+A L H+K
Sbjct: 294 PYR----CGECGYRTAKKDHLTEHLKIHTGEKPFMCGECGYRTAHKCHLSEHMK 343
Score = 45.8 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HTGEKPY C QC + A + L+ H+ K
Sbjct: 380 YMCGECGYRATQKAHLSQHMRIHTGEKPYKCDQCDYTVAHKSSLNDHMLK 429
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + + H+RTHTGEKP+ C QC F +A + L H
Sbjct: 85 YMCGECGYRAAQKHHLSRHMRTHTGEKPFKCDQCDFSAAQKSTLDNH 131
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C Y + + H+RTHTGEKPY C C + +A L H++K
Sbjct: 436 YKCGECGYKTAKKANLFRHMRTHTGEKPYKCDLCDYSAAQKCALDQHMRK 485
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 57/142 (40%), Gaps = 27/142 (19%)
Query: 79 CKHCHSQLSHLD--LLDH-------CKTCSYMIRPNANNTFSPF------CIYCKAVLST 123
C + S S LD L H C C Y R + FS C + +A L
Sbjct: 231 CSYSASDKSKLDKHLAKHAGKKAYKCDECGY--RTAKKSNFSRHMKTRQKCNFKRANLIK 288
Query: 124 NLNELIEHC-----RTCKSMIRTDPFR-----HKFVCYACDYFSYNIGCMRSHIRTHTGE 173
N E C RT K T+ + F+C C Y + + + H++THTGE
Sbjct: 289 NFGEKPYRCGECGYRTAKKDHLTEHLKIHTGEKPFMCGECGYRTAHKCHLSEHMKTHTGE 348
Query: 174 KPYACGQCAFRSASVAGLHYHL 195
KP+ C QC + +A + H+
Sbjct: 349 KPFKCDQCDYSAAQKTHMDRHI 370
Score = 43.9 bits (102), Expect = 0.035, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHI-RTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++T F C CDY + M HI H+ EKPY CG+C +R+ A L H++
Sbjct: 342 MKTHTGEKPFKCDQCDYSAAQKTHMDRHIVAKHSDEKPYMCGECGYRATQKAHLSQHMR 400
Score = 43.1 bits (100), Expect = 0.067, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+R HT EKP+ C QC++ ++ + L HL K
Sbjct: 198 YMCEVCGYRTTHKFNLSRHMRIHTEEKPFKCDQCSYSASDKSKLDKHLAK 247
Score = 41.6 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
H+ HTGEKPY CG+C +R+A L H++
Sbjct: 75 HVVKHTGEKPYMCGECGYRAAQKHHLSRHMR 105
Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 15/101 (14%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C C ++H L+ +M++ N + C C + N L H RT
Sbjct: 410 CDQCDYTVAHKSSLN-----DHMLKHTGENPYK--CGECGYKTAKKAN-LFRHMRTHTG- 460
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACG 179
P++ C CDY + + H+R HTGEKPY CG
Sbjct: 461 --EKPYK----CDLCDYSAAQKCALDQHMRKHTGEKPYMCG 495
Score = 40.0 bits (92), Expect = 0.55, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C Y + + + H+ H G+K Y C +C +R+A + H+K
Sbjct: 226 FKCDQCSYSASDKSKLDKHLAKHAGKKAYKCDECGYRTAKKSNFSRHMK 274
Score = 36.6 bits (83), Expect = 6.2, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 164 RSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R+++ + GEKPY CG+C +R+A L HLK
Sbjct: 283 RANLIKNFGEKPYRCGECGYRTAKKDHLTEHLK 315
>gi|260814424|ref|XP_002601915.1| hypothetical protein BRAFLDRAFT_124589 [Branchiostoma floridae]
gi|229287218|gb|EEN57927.1| hypothetical protein BRAFLDRAFT_124589 [Branchiostoma floridae]
Length = 469
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHL 195
K+ C CDY + + +H+ + HTGEKPYAC +C FR+A +GL H+
Sbjct: 355 KYRCPLCDYSAVQRKVLEAHVMSKHTGEKPYACTECGFRTAHQSGLSRHM 404
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CD+ + G + +H + HTG+KP+ CG C R+A A + H+K
Sbjct: 241 YKCDQCDFSTAWKGSLDTHKKRHTGDKPFMCGVCGHRAAQKAAISQHMK 289
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C + + + H++TH EK Y C QC FR+A L HL K
Sbjct: 269 FMCGVCGHRAAQKAAISQHMKTHGAEKSYKCDQCDFRTAWKTSLDIHLAK 318
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 24/49 (48%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CD + G M H TH GEKPY C C R S + L H+K
Sbjct: 157 YSCDLCDVCTAKKGDMDKHKATHRGEKPYTCEVCGVRMGSKSNLWIHMK 205
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++T + C CD+ + + H+ HT EKPY CG+C FR+ L H+
Sbjct: 288 MKTHGAEKSYKCDQCDFRTAWKTSLDIHLAKHTDEKPYMCGECGFRTVYKHSLAKHM 344
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C+Y ++ M H+ H G KPY C QC F +A L H K+
Sbjct: 213 YGCGECEYTTFVKSNMMVHMDVHAGFKPYKCDQCDFSTAWKGSLDTHKKR 262
>gi|260806362|ref|XP_002598053.1| hypothetical protein BRAFLDRAFT_108625 [Branchiostoma floridae]
gi|229283324|gb|EEN54065.1| hypothetical protein BRAFLDRAFT_108625 [Branchiostoma floridae]
Length = 193
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C+Y + + +H+ HTGEKPY CG+C +R+A + L H++
Sbjct: 131 MRTHTGEKPYKCDQCEYSAAEKSSLNNHLAKHTGEKPYMCGECGYRTARKSSLSRHMR 188
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CDY + + +H THTG+KPY CG+C FR+A + L H++
Sbjct: 84 FKCDQCDYSAARKVTLVTHQATHTGDKPYMCGECGFRTAQRSKLSRHMR 132
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H+RTHTGEKPY C QC + +A + L+ HL K
Sbjct: 112 YMCGECGFRTAQRSKLSRHMRTHTGEKPYKCDQCEYSAAEKSSLNNHLAK 161
Score = 43.1 bits (100), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H HTGEKPY CG+C +R+ + L H++
Sbjct: 28 YKCDQCDYSAARKYQLDQHRTKHTGEKPYMCGECGYRTVQRSKLSRHMR 76
Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
++C C Y + + H+R HTGEKP+ C QC + +A
Sbjct: 56 YMCGECGYRTVQRSKLSRHMRIHTGEKPFKCDQCDYSAA 94
>gi|158512262|sp|A0JPB4.1|IKZF5_XENTR RecName: Full=Zinc finger protein Pegasus; AltName: Full=Ikaros
family zinc finger protein 5
gi|117558051|gb|AAI27340.1| Unknown (protein for MGC:146882) [Xenopus (Silurana) tropicalis]
Length = 434
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC S LIEH R I T H+ C+ C + S + +H+R+HTGE
Sbjct: 84 CRYCN-YASKGTARLIEHIR-----IHTGEKPHR--CHLCPFASAYERHLEAHMRSHTGE 135
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C+FR + + L +H ++ +
Sbjct: 136 KPYKCELCSFRCSDRSNLSHHRRRKH 161
Score = 43.1 bits (100), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F K C C+Y S + HIR HTGEKP+ C C F SA L H++
Sbjct: 78 FDGKLKCRYCNYASKGTARLIEHIRIHTGEKPHRCHLCPFASAYERHLEAHMR 130
>gi|260832640|ref|XP_002611265.1| hypothetical protein BRAFLDRAFT_211003 [Branchiostoma floridae]
gi|229296636|gb|EEN67275.1| hypothetical protein BRAFLDRAFT_211003 [Branchiostoma floridae]
Length = 57
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 153 CDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
CDY + G + H+ HTGEKPY CGQC +R+A + L H++
Sbjct: 1 CDYSATQKGNLDQHMTKHTGEKPYLCGQCGYRTAGRSHLSVHMR 44
>gi|260782425|ref|XP_002586288.1| hypothetical protein BRAFLDRAFT_109288 [Branchiostoma floridae]
gi|229271388|gb|EEN42299.1| hypothetical protein BRAFLDRAFT_109288 [Branchiostoma floridae]
Length = 308
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 51/118 (43%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C Q S LD L S+M + + C C S L L H
Sbjct: 196 CEECGRQFSKLDNLK-----SHMRNHSGEKPYK--CKECDKQFS-ELTSLKRH------- 240
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IRT + C C +G ++ H+RTHTGEKPY C +C + +++ L HL+
Sbjct: 241 IRTHTGEKPYRCDECSKQFSQLGNLKRHMRTHTGEKPYRCEECFRQFSAMGDLKTHLR 298
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C Q S L+ L S+M + + C C S L L H
Sbjct: 84 CEDCGRQFSELNTLK-----SHMRTHSGEKPYK--CKECGKQFS-ELTSLKRH------- 128
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IRT + C C +G ++ H+RTHTGEKPY C +C+ + + +A L H++
Sbjct: 129 IRTHTGEKPYRCDECSKQFSQLGNLKRHMRTHTGEKPYRCDECSEQFSMLANLKRHMR 186
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 143 PFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
P HK C CD + ++ H+RTHTGEKP+ CG C + ++ L H+
Sbjct: 23 PRTHK--CGECDKEFRRLIELKRHVRTHTGEKPFRCGDCGKQFGDLSNLRRHM 73
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C + ++SH+RTH+GEKPY C +C + + + L H++
Sbjct: 82 YKCEDCGRQFSELNTLKSHMRTHSGEKPYKCKECGKQFSELTSLKRHIR 130
Score = 36.6 bits (83), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 46/111 (41%), Gaps = 22/111 (19%)
Query: 74 QNHS-----LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNE 127
+NHS CK C Q S L L IR + P+ C C S L
Sbjct: 214 RNHSGEKPYKCKECDKQFSELTSL------KRHIRTHTGE--KPYRCDECSKQFS-QLGN 264
Query: 128 LIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAC 178
L H RT P+R C C +G +++H+RTHTGEKP+ C
Sbjct: 265 LKRHMRT---HTGEKPYR----CEECFRQFSAMGDLKTHLRTHTGEKPFKC 308
>gi|260814388|ref|XP_002601897.1| hypothetical protein BRAFLDRAFT_86376 [Branchiostoma floridae]
gi|229287200|gb|EEN57909.1| hypothetical protein BRAFLDRAFT_86376 [Branchiostoma floridae]
Length = 310
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CD+ S + +H+ THTGEKPY+CG+C +R+ + L H++K
Sbjct: 206 YKCDQCDFCSARKFNLDTHMATHTGEKPYSCGECGYRTGDRSSLSRHVRK 255
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C Y + + + H+R HTGEKPY CG C + + L+ H+KK
Sbjct: 234 YSCGECGYRTGDRSSLSRHVRKHTGEKPYRCGVCGYGAGRRFNLYRHMKK 283
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C CDY + +R H+ HTG KPY C QC FR+ + L H+ K
Sbjct: 66 FKCDQCDYCTTCQAYLRKHMIKHTGVKPYKCDQCDFRTTRKSKLATHMAK 115
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CD+ + + H+ HTG+KPY CG+C +R+A L H+ K
Sbjct: 10 YKCDQCDFSTCWKNSFQRHMANHTGDKPYMCGRCGYRTADSFHLSQHMAK 59
Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 11/123 (8%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPN--ANNTFSPF-CIYCKAVLSTNLNELIEHCRT 134
+ KH + D D+C TC +R + + P+ C C +T ++L H
Sbjct: 57 MAKHTGEKPFKCDQCDYCTTCQAYLRKHMIKHTGVKPYKCDQCD-FRTTRKSKLATH--- 112
Query: 135 CKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+ + C CDY + + H+ HTGEKPYAC C F +A L+ H
Sbjct: 113 ----MAKHTGEKPYKCDRCDYSAAAKFSLDMHMAKHTGEKPYACDLCDFCTAWKQNLNIH 168
Query: 195 LKK 197
+ K
Sbjct: 169 MAK 171
>gi|432959648|ref|XP_004086346.1| PREDICTED: zinc finger protein 782-like [Oryzias latipes]
Length = 241
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 15/119 (12%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKS 137
LCK C H+ L ++M F C C + ST ++ LI H
Sbjct: 39 LCKECDKGFGHISNLK-----THMRTHTGEKPFP--CKECNSSFST-VSNLIRH------ 84
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IRT F C CD +++H+RTHTGEKP++C +C ++ L H++
Sbjct: 85 -IRTHTGEKPFSCKECDASFSQRSNLKTHMRTHTGEKPFSCKECNASFCQISDLIRHMR 142
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT F+C CD +I +++H+RTHTGEKP+ C +C ++V+ L H+
Sbjct: 26 KTHMRTHTGEMPFLCKECDKGFGHISNLKTHMRTHTGEKPFPCKECNSSFSTVSNLIRHI 85
Query: 196 K 196
+
Sbjct: 86 R 86
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
CK C + S L ++M FS C C A +++LI H
Sbjct: 96 CKECDASFSQRSNLK-----THMRTHTGEKPFS--CKECNASF-CQISDLIRH------- 140
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CD + I +++H+R HTGEKP+ C +C + + L H++
Sbjct: 141 MRTHTGEKPFSCKECDASFHQIYNLKTHMRIHTGEKPFPCEECDKSFSQRSNLKKHMR 198
>gi|260815341|ref|XP_002602432.1| hypothetical protein BRAFLDRAFT_56774 [Branchiostoma floridae]
gi|229287741|gb|EEN58444.1| hypothetical protein BRAFLDRAFT_56774 [Branchiostoma floridae]
Length = 341
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C+SQ S L L ++M + C C S L+ L +H
Sbjct: 152 CEECNSQFSQLGALK-----THMQTHTGEKPYK--CEECGRQFS-QLSHLKDH------- 196
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C +G +R+H+RTHTGEKPY C C + + + L H++
Sbjct: 197 MRTHTGEKPYTCEECSRQFSELGALRTHMRTHTGEKPYRCENCGKQFSHYSALKVHMR 254
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 17/119 (14%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKS 137
C++C Q SH L + + P+ C C S L+ L H
Sbjct: 236 CENCGKQFSHYSALK--------VHMRTHTGEKPYTCEECSKQFS-QLSNLKRH------ 280
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IR + + C C +G +++H+RTHTGEKPY C +C+ + A+ + L+ H+K
Sbjct: 281 -IRAHTGKKPYRCEECSRQFSRLGNLKTHMRTHTGEKPYTCEECSKQFAAQSNLYKHMK 338
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Query: 118 KAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHI 167
KA + T+ E C C K +RT + C AC + +++H+
Sbjct: 54 KAHMRTHTGEKPYKCEECSRQFSQPGHLKKHMRTHTREKPYRCEACSRHFSRLDALQTHM 113
Query: 168 RTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RTHTGEKPY C +C+ + + L H++
Sbjct: 114 RTHTGEKPYKCEECSRQFSESGQLKTHMR 142
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C+ +G +++H++THTGEKPY C +C + + ++ L H+
Sbjct: 138 KTHMRTHTGEKPYRCEECNSQFSQLGALKTHMQTHTGEKPYKCEECGRQFSQLSHLKDHM 197
Query: 196 K 196
+
Sbjct: 198 R 198
>gi|366039961|ref|NP_001242994.1| zinc-finger protein 80-like [Mus musculus]
Length = 581
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%)
Query: 126 NELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
++ H +T ++ +T F C CD G ++SHIRTHTGEKPY C QC
Sbjct: 363 DKAFSHHKTLQTHRKTHTGEKPFKCNECDKAFSEKGSLQSHIRTHTGEKPYKCNQCDKAF 422
Query: 186 ASVAGLHYHLK 196
+ L H++
Sbjct: 423 SHKQNLQIHIR 433
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 111 SPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRT 169
PF C C+ S + N L H RT R PF+ C CD G +++H RT
Sbjct: 187 KPFKCNQCEKAFSHHCN-LQTHRRT---HTREKPFK----CNECDKAFSQFGNLQNHRRT 238
Query: 170 HTGEKPYACGQCAFRSASVAGLHYHL 195
HTGEKP+ C +C + L H+
Sbjct: 239 HTGEKPFKCNECDKAFSEKGSLQKHI 264
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 21/42 (50%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
RT F C CD G ++ HI HTGEKPY C QC
Sbjct: 237 RTHTGEKPFKCNECDKAFSEKGSLQKHISIHTGEKPYKCNQC 278
Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 25/46 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
+S IRT + C CD + ++ HIR HTGEKPY C QC
Sbjct: 401 QSHIRTHTGEKPYKCNQCDKAFSHKQNLQIHIRIHTGEKPYKCNQC 446
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 9/72 (12%)
Query: 111 SPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRT 169
PF C C V S + + L H RT R P++ C C +++H RT
Sbjct: 495 KPFQCNLCDKVFSRHFH-LQNHIRT---HTREKPYK----CNECGKGFSQHSSLQTHRRT 546
Query: 170 HTGEKPYACGQC 181
HTGEKP+ C QC
Sbjct: 547 HTGEKPFKCNQC 558
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 148 FVCYACDY-FSYNIGCMRSHIRTHTGEKPYACGQC 181
+ C CD FSY ++ HIR HTGEKPY C QC
Sbjct: 441 YKCNQCDKAFSYKQN-LQIHIRIHTGEKPYKCNQC 474
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++ IRT + C CD + +++H +THTGEKP+ C +C + L H+
Sbjct: 345 QNHIRTHTGEKPYRCNQCDKAFSHHKTLQTHRKTHTGEKPFKCNECDKAFSEKGSLQSHI 404
Query: 196 K 196
+
Sbjct: 405 R 405
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 148 FVCYACDY-FSYNIGCMRSHIRTHTGEKPYACGQCA 182
+ C CD FS R HIRTHTGEKP+ C QC
Sbjct: 161 YKCNQCDKAFSLKYSLQR-HIRTHTGEKPFKCNQCE 195
>gi|403284782|ref|XP_003933734.1| PREDICTED: zinc finger protein ZFAT isoform 1 [Saimiri boliviensis
boliviensis]
Length = 1270
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 298 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCTQCSYASAIKANLNVHLRK 347
Score = 40.4 bits (93), Expect = 0.45, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 300 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCTQCSYASAIKANLNVHLRKHTGE 351
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 352 K-FACDYCSFTCLSKGHLKVHIERVH 376
Score = 36.6 bits (83), Expect = 5.3, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 938 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 988
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 989 DGKQFKCTVCDYTAAQKPQLLRHMEQHVSFKPFRCAHCHYSCNISGSLKRHYNRKH 1044
Score = 36.6 bits (83), Expect = 5.8, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 909 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 957
>gi|410055366|ref|XP_003953834.1| PREDICTED: transcriptional repressor CTCFL [Pan troglodytes]
Length = 460
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 324 TSGELVRHTRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 383
Query: 190 GLHYHLK 196
L H++
Sbjct: 384 KLKRHMR 390
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +R+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 358 KRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEKPYECHICHTRFTQSGTMKIHI 417
Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 130 EHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSAS 187
E R+ K+ +T + F C C + S + H++THT EKP+ C C FR+ +
Sbjct: 239 EKARSTKNQRKTKGAKQTFHCDVCMFTSSRMSSFNRHMKTHTNEKPHLCHLCLKTFRTVT 298
Query: 188 V 188
+
Sbjct: 299 L 299
>gi|260815012|ref|XP_002602207.1| hypothetical protein BRAFLDRAFT_216678 [Branchiostoma floridae]
gi|229287514|gb|EEN58219.1| hypothetical protein BRAFLDRAFT_216678 [Branchiostoma floridae]
Length = 350
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 11/80 (13%)
Query: 119 AVLSTNLNELIEHCR--TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY 176
+TN + L H R TC+ + R D CDY + + H+ HTGEKPY
Sbjct: 179 GYRTTNKSHLSRHMRSHTCEKLYRWD---------VCDYSAAKKSDLEKHVGRHTGEKPY 229
Query: 177 ACGQCAFRSASVAGLHYHLK 196
CG+C +R+A + L HL+
Sbjct: 230 ICGECGYRTAYRSSLVVHLR 249
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 151 YACDYFSYNIGCMRS---HIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
Y CDY Y+ R H+ HTGEKPY CG+C +R+A + L HL+
Sbjct: 88 YKCDYCEYSSAENRDLNKHMARHTGEKPYMCGECGYRTADRSSLAVHLR 136
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
++C C Y + + + H+RTHTGEKPY CG C + +A L H+ + +
Sbjct: 116 YMCGECGYRTADRSSLAVHLRTHTGEKPYKCGLCDYSAAKKGNLDRHVTRKH 167
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C CDY + + H+ THTGEKPY C C +R+AS L H+ +
Sbjct: 248 LRTHTGEKPYRCALCDYSAAKKDNLDRHVTTHTGEKPYMCDNCGYRAASRFHLSRHMSR 306
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CD+ + + H+ HTGEKPY CG+C +R+A L H+++
Sbjct: 32 YECDQCDFSAAWKCSLDRHLARHTGEKPYMCGECGYRTADRFSLTAHMRR 81
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+F C C Y + + +H R HTGEKPY C QC F +A L HL +
Sbjct: 3 RFKCRDCGYGAATKVGLINHTRKHTGEKPYECDQCDFSAAWKCSLDRHLAR 53
Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHI-RTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + G + H+ R HTG+KP+ C +C +R+ + + L H++
Sbjct: 135 LRTHTGEKPYKCGLCDYSAAKKGNLDRHVTRKHTGDKPHLCEECGYRTTNKSHLSRHMR 193
Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + +H+R HTG KPY C C + SA L+ H+ +
Sbjct: 60 YMCGECGYRTADRFSLTAHMRRHTGVKPYKCDYCEYSSAENRDLNKHMAR 109
>gi|395541796|ref|XP_003772823.1| PREDICTED: PR domain zinc finger protein 5-like [Sarcophilus
harrisii]
Length = 607
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDY-FSYNIGCMRSHIRTHTG 172
C YC ++N T + IR+ + C+ CD FS N G ++ HIRTHT
Sbjct: 468 CPYCGQKFASNG--------TLRVHIRSHTGERPYQCHYCDKAFSKNDG-LKMHIRTHTR 518
Query: 173 EKPYACGQCAFRSASVAGLHYHLK 196
EKPY C QC + GL H++
Sbjct: 519 EKPYQCSQCNKAFSQKRGLDEHMR 542
Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
KS +T + +C C + G +R HIR+HTGE+PY C C + GL H+
Sbjct: 454 KSHKKTHTGEKEKICPYCGQKFASNGTLRVHIRSHTGERPYQCHYCDKAFSKNDGLKMHI 513
Query: 196 K 196
+
Sbjct: 514 R 514
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 10/69 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDY-FSYNIGCMRSHIRTHTG 172
C YC S N + L H RT R P++ C C+ FS G + H+RTHTG
Sbjct: 496 CHYCDKAFSKN-DGLKMHIRT---HTREKPYQ----CSQCNKAFSQKRG-LDEHMRTHTG 546
Query: 173 EKPYACGQC 181
EKP+ C C
Sbjct: 547 EKPFQCDVC 555
Score = 35.8 bits (81), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
K+ C CD ++SH +THTGEK C C + AS L H++
Sbjct: 437 KYKCDLCDKAFVTPSVLKSHKKTHTGEKEKICPYCGQKFASNGTLRVHIR 486
>gi|260805198|ref|XP_002597474.1| hypothetical protein BRAFLDRAFT_223126 [Branchiostoma floridae]
gi|229282739|gb|EEN53486.1| hypothetical protein BRAFLDRAFT_223126 [Branchiostoma floridae]
Length = 562
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C Q S L L +M ++ C C S L +L +H RT
Sbjct: 12 CEECSKQFSKLSNLK-----RHMRTHTGEKSYR--CDECSRQFS-QLGDLKKHLRT---H 60
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C C +G ++SH+RTHTGEKPY C +C+ + + + L HL+
Sbjct: 61 TGEKPYR----CEECSKLFSRLGHLKSHMRTHTGEKPYMCDECSRQFSQLGDLKTHLR 114
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 10/89 (11%)
Query: 118 KAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHI 167
K L T+ E C C KS +RT ++C C +G +++H+
Sbjct: 54 KKHLRTHTGEKPYRCEECSKLFSRLGHLKSHMRTHTGEKPYMCDECSRQFSQLGDLKTHL 113
Query: 168 RTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RTHTGEKPY C +C+ + + + L H++
Sbjct: 114 RTHTGEKPYRCEECSRQFSRLGHLKSHMR 142
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C Q S L L +M ++ C C S L +L +H RT
Sbjct: 376 CEECSKQFSKLSNLK-----RHMRTHTGEKSYR--CDECSRQFS-QLGDLKKHLRT---H 424
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C C +G ++SH+RTHTGEKPY C +C+ + + ++ L H++
Sbjct: 425 TGEKPYR----CEECSKLFSRLGHLKSHMRTHTGEKPYMCEECSKQFSHLSQLKTHMR 478
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 57/139 (41%), Gaps = 29/139 (20%)
Query: 79 CKHCHSQLSHLDLLD------------HCKTCSYMIRPNAN---------NTFSPFCIYC 117
C+ C Q S LD L+ C+ CS +N S C C
Sbjct: 180 CEECSKQFSRLDSLNTHIRTHTGEKPYRCEECSKQFSKLSNLKRHMRTHTGEKSYRCDEC 239
Query: 118 KAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA 177
S L +L H RT P+R C C +G ++SH+RTHTGEKPY
Sbjct: 240 SRQFS-QLGDLKTHLRT---HTGEKPYR----CEECSRQFSRLGHLKSHMRTHTGEKPYM 291
Query: 178 CGQCAFRSASVAGLHYHLK 196
C +C+ + + + L H++
Sbjct: 292 CEECSRQFSRLDSLKSHIR 310
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
KS IRT + C C + + +HIRTHTGEKPY C +C+ + + ++ L H+
Sbjct: 166 KSHIRTHAGEKPYRCEECSKQFSRLDSLNTHIRTHTGEKPYRCEECSKQFSKLSNLKRHM 225
Query: 196 K 196
+
Sbjct: 226 R 226
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 10/89 (11%)
Query: 118 KAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHI 167
K L T+ E C C KS +RT ++C C ++ +++H+
Sbjct: 418 KKHLRTHTGEKPYRCEECSKLFSRLGHLKSHMRTHTGEKPYMCEECSKQFSHLSQLKTHM 477
Query: 168 RTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RTHTGEKPY C +C+ + + + L H++
Sbjct: 478 RTHTGEKPYRCEECSRQFSQLGHLKAHMR 506
Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 21/122 (17%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLS--TNLNELIEHCRT 134
+C+ C Q S LD L IR +A P+ C C S +LN
Sbjct: 291 MCEECSRQFSRLDSLK------SHIRTHAGE--KPYRCEECSKQFSRPDSLN-------- 334
Query: 135 CKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+ IRT + C C+ + + H+R HTGEKPY C +C+ + + ++ L H
Sbjct: 335 --THIRTHTGEKPYRCEECNRQFSQLSDFKRHMRAHTGEKPYRCEECSKQFSKLSNLKRH 392
Query: 195 LK 196
++
Sbjct: 393 MR 394
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 15/119 (12%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKS 137
+C+ C Q SHL L ++M + C C S L L H RT
Sbjct: 459 MCEECSKQFSHLSQLK-----THMRTHTGEKPYR--CEECSRQFS-QLGHLKAHMRT--- 507
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C C + +++H+ HTGEKPY C +C+ + + ++ L H++
Sbjct: 508 HTGEKPYR----CEKCSRQFSRLSHLKTHMHNHTGEKPYRCEECSRQFSLLSHLKTHMR 562
>gi|432848795|ref|XP_004066455.1| PREDICTED: zinc finger protein 678-like [Oryzias latipes]
Length = 215
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 77/188 (40%), Gaps = 27/188 (14%)
Query: 27 NITSDVYIAVLVFSNLTFFITAQLVLMSLDQILNLNLSVLLVTTIPTQNHSLCKHCHSQL 86
N TS++ + + F Q +QI +L + T + CK C +Q+
Sbjct: 26 NYTSNLKKHMRTHTGEKPFSCKQ-CKKRFNQISHLKTHMRTHTGEKPFSCKECKRCFNQI 84
Query: 87 SHLD--LLDH-------CKTCSYMIRPNAN--------NTFSPF-CIYCKAVLSTNLNEL 128
SHL+ + H CK C +N PF C C+ + ++ L
Sbjct: 85 SHLERHIRSHTGEKPFSCKECDKDFGDISNLQTHMRSHTGEKPFPCKECQKSFA-QISSL 143
Query: 129 IEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASV 188
K+ +R F C CD + +++H+RTHTGEKP++C +C R +
Sbjct: 144 -------KTHMRIHTGEKPFTCEECDKRFSTVSSLKTHMRTHTGEKPFSCKECKKRFRQL 196
Query: 189 AGLHYHLK 196
+ L H++
Sbjct: 197 SNLQAHMR 204
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 147 KFVCYACDY-FSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+F C CD F+Y ++ H+RTHTGEKP++C QC R ++ L H++
Sbjct: 15 RFSCKECDKSFNYTSN-LKKHMRTHTGEKPFSCKQCKKRFNQISHLKTHMR 64
>gi|261289255|ref|XP_002603070.1| hypothetical protein BRAFLDRAFT_198724 [Branchiostoma floridae]
gi|229288387|gb|EEN59082.1| hypothetical protein BRAFLDRAFT_198724 [Branchiostoma floridae]
Length = 226
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C+Y + + G + H+R HTGEKPY C QC + + A L H+
Sbjct: 56 YMCGECEYRTADKGNLSKHVRKHTGEKPYKCDQCDYSAIRKAKLDRHI 103
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+VC C+Y + + G + HIR HTGEKPY C C + +A L H+
Sbjct: 142 YVCEECEYRTADKGNLSRHIRKHTGEKPYKCDLCDYSAALKYSLDCHM 189
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTG 172
C +C + + ++LI H +R + F C CDY + + ++ HI T HT
Sbjct: 1 CDFC-GFKTVSKSQLITH-------VRKHTGENPFKCDLCDYSTAHKASLKRHIFTKHTD 52
Query: 173 EKPYACGQCAFRSASVAGLHYHLKK 197
E PY CG+C +R+A L H++K
Sbjct: 53 ENPYMCGECEYRTADKGNLSKHVRK 77
Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 148 FVCYACDYFSYNIGCMRSHI-RTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + M HI R HT EKPY C +C +R+A L H++K
Sbjct: 113 YKCDQCDYSAAQKIEMDRHILRKHTDEKPYVCEECEYRTADKGNLSRHIRK 163
Score = 40.0 bits (92), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 139 IRTDPFRHKFVCYACDY---FSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
IR + C CDY Y++ C H+ THTG+KPY C QC + +A L H+
Sbjct: 161 IRKHTGEKPYKCDLCDYSAALKYSLDC---HMTTHTGDKPYKCDQCNYSAARKDTLGQHV 217
Query: 196 K 196
+
Sbjct: 218 R 218
>gi|260809009|ref|XP_002599299.1| hypothetical protein BRAFLDRAFT_275175 [Branchiostoma floridae]
gi|229284576|gb|EEN55311.1| hypothetical protein BRAFLDRAFT_275175 [Branchiostoma floridae]
Length = 402
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + G + H+ HTGEKP+ C QC +R+A A L H+++
Sbjct: 66 YKCDQCDYSVGDKGSLDRHLAKHTGEKPFLCEQCGYRAAKKADLSKHMRR 115
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + + H+ HTGEKPY CG+C +R+A + L H++
Sbjct: 344 YKCDQCDYSAADKSTLGQHLMKHTGEKPYMCGECGYRAARKSRLTKHMR 392
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
+ C C Y + +G M H+R HTGEKP+ C QC++R+A
Sbjct: 150 YACEECGYRAVAMGDMSRHMRKHTGEKPHKCDQCSYRAA 188
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + + C CDY + + H+ HTGEKPY CG+C +R+A + L H++
Sbjct: 279 MRTHTGQKPYKCDQCDYSAALKNTLNQHLAKHTGEKPYMCGECGYRTAKKSHLSRHMR 336
Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C+Y + +R H+ HTG+KPY CG+C +R+A + L H++
Sbjct: 232 YKCDQCNYSAALKHTLRQHLANHTGDKPYMCGECGYRTARKSHLSKHMR 280
Score = 42.4 bits (98), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTG+KPY C QC + +A L+ HL K
Sbjct: 260 YMCGECGYRTARKSHLSKHMRTHTGQKPYKCDQCDYSAALKNTLNQHLAK 309
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HTG+KPY C QC + +A + L HL K
Sbjct: 316 YMCGECGYRTAKKSHLSRHMRIHTGQKPYKCDQCDYSAADKSTLGQHLMK 365
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CDY + + H + HTG KPYAC +C +R+ ++ + H++K
Sbjct: 124 CDQCDYSAATKSSLIRHNKKHTGYKPYACEECGYRAVAMGDMSRHMRK 171
Score = 39.7 bits (91), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + H+R HTG KP+ C QC + +A+ + L H KK
Sbjct: 94 FLCEQCGYRAAKKADLSKHMRRHTGYKPHKCDQCDYSAATKSSLIRHNKK 143
>gi|260822859|ref|XP_002602235.1| hypothetical protein BRAFLDRAFT_121485 [Branchiostoma floridae]
gi|229287542|gb|EEN58247.1| hypothetical protein BRAFLDRAFT_121485 [Branchiostoma floridae]
Length = 509
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 121 LSTNLNELIEHCRTCK--SMIRTDPFRH--------KFVCYACDYFSYNIGCMRSHIRTH 170
+ T+ E C C ++ ++D ++H ++C C Y S + H+RTH
Sbjct: 329 MRTHTGEKPYKCDQCDYSALQKSDLYKHLVKHTGDKPYMCGECGYRSALKSTLSKHMRTH 388
Query: 171 TGEKPYACGQCAFRSASVAGLHYHL 195
TGEKPY C QC + +A + L+ HL
Sbjct: 389 TGEKPYKCDQCDYSAAQTSALNQHL 413
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H HTGEKPY CG+C +RSA L H++
Sbjct: 161 VRTHTGEKPYKCDQCDYSAAVKSTLDRHQAKHTGEKPYICGECGYRSARKFDLSLHMR 218
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 17/111 (15%)
Query: 95 CKTCSYMIRPNAN--------NTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFR 145
C C Y AN P+ C C +T +L +H +RT
Sbjct: 284 CDQCDYSAAEKANFDRHLANHTGEKPYMCGDC-GYRTTRKPDLAKH-------MRTHTGE 335
Query: 146 HKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTG+KPY CG+C +RSA + L H++
Sbjct: 336 KPYKCDQCDYSALQKSDLYKHLVKHTGDKPYMCGECGYRSALKSTLSKHMR 386
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 13/101 (12%)
Query: 99 SYMIRPNANNTFSPF-CIYC--KAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDY 155
S + +P AN P+ C C K +NL++ RT + C CDY
Sbjct: 16 SLVSQPKANTGDKPYMCGECGYKTAWRSNLSQ----------HRRTHTGEKPYKCDQCDY 65
Query: 156 FSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ + H+ HTG+ PY CG+C +R+A L H+K
Sbjct: 66 SAAQKSSLAIHLAKHTGDMPYMCGECGYRTAQKFILSRHMK 106
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + + C CDY + H+ HTGEKPY CG C +R+ L H++
Sbjct: 273 MRTHTGQKPYKCDQCDYSAAEKANFDRHLANHTGEKPYMCGDCGYRTTRKPDLAKHMR 330
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ H+GEKPY CG+C +R+A L H++
Sbjct: 217 MRTHNGEKPYKCDKCDYSAARKCHLDQHLAKHSGEKPYMCGECGYRTAQKYRLSRHMR 274
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG KPY CG+C +R+ L H++
Sbjct: 385 MRTHTGEKPYKCDQCDYSAAQTSALNQHLAIHTGNKPYMCGECGYRTVKKCHLSEHMR 442
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H RTHTGEKPY C QC + +A + L HL K
Sbjct: 30 YMCGECGYKTAWRSNLSQHRRTHTGEKPYKCDQCDYSAAQKSSLAIHLAK 79
Score = 43.1 bits (100), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTG+KPY C QC + +A A HL
Sbjct: 254 YMCGECGYRTAQKYRLSRHMRTHTGQKPYKCDQCDYSAAEKANFDRHL 301
Score = 42.7 bits (99), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + + + L+ HL K
Sbjct: 310 YMCGDCGYRTTRKPDLAKHMRTHTGEKPYKCDQCDYSALQKSDLYKHLVK 359
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 134 TCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
TCKS + +H ++C C + + + H+RTHTGEKPY C QC + +A +
Sbjct: 124 TCKSNLDRHLAKHSGDKPYMCEECGFRAAQKSDLSIHVRTHTGEKPYKCDQCDYSAAVKS 183
Query: 190 GLHYHLKK 197
L H K
Sbjct: 184 TLDRHQAK 191
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGEKPY C C + +A + L HL
Sbjct: 422 YMCGECGYRTVKKCHLSEHMRTHTGEKPYKCDHCDYSAAVKSSLDRHL 469
Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y S + H+RTH GEKPY C +C + +A L HL K
Sbjct: 198 YICGECGYRSARKFDLSLHMRTHNGEKPYKCDKCDYSAARKCHLDQHLAK 247
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H++THTGE+PY C QC + + + L HL K
Sbjct: 86 YMCGECGYRTAQKFILSRHMKTHTGERPYKCNQCDYSATCKSNLDRHLAK 135
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++T + C CDY + + H+ H+G+KPY C +C FR+A + L H++
Sbjct: 105 MKTHTGERPYKCNQCDYSATCKSNLDRHLAKHSGDKPYMCEECGFRAAQKSDLSIHVR 162
>gi|194681285|ref|XP_001256332.2| PREDICTED: zinc finger protein 333 [Bos taurus]
gi|297476503|ref|XP_002688778.1| PREDICTED: zinc finger protein 333 [Bos taurus]
gi|296486002|tpg|DAA28117.1| TPA: zinc finger protein 333 [Bos taurus]
Length = 824
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 42/141 (29%), Positives = 52/141 (36%), Gaps = 27/141 (19%)
Query: 79 CKHCHSQL-SHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLN--------ELI 129
C HC H L H +T + N+ PF STNLN E +
Sbjct: 632 CGHCGKTFREHSSLKTHVRTHTREKPYQCNHCGKPF------RTSTNLNVHKRIHTGEKL 685
Query: 130 EHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACG 179
C TC KS +R + C C +R H RTHTG+KPY C
Sbjct: 686 YECATCGQVLSRLSTLKSHMRIHTGEKPYPCPECGRAFGEPSSLRKHARTHTGKKPYVCP 745
Query: 180 QC--AFRSASVAGLHYHLKKT 198
QC AF +S +H T
Sbjct: 746 QCGRAFGQSSHLIVHVRTHTT 766
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 48/118 (40%), Gaps = 21/118 (17%)
Query: 79 CKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
C+ C + +L H KT + PF C C + N N LI H R
Sbjct: 548 CQECRQAFKYFSNLRRHLKT---------HGGEKPFECSQCGKTFTRNFN-LILHQR--- 594
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA--FRSASVAGLH 192
+ + P+ C C +RSH+RTHTGEKP+ CG C FR S H
Sbjct: 595 NHMGEKPYS----CKDCGKAFTQPSSLRSHMRTHTGEKPFECGHCGKTFREHSSLKTH 648
Score = 39.3 bits (90), Expect = 0.96, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLH 192
RT + +VC C + H+RTHT +PY C QC AFR +S +H
Sbjct: 734 RTHTGKKPYVCPQCGRAFGQSSHLIVHVRTHTTGRPYECTQCDKAFRHSSSLSVH 788
Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 18/83 (21%)
Query: 104 PNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC----DYFSYN 159
P+ + T++ C C + +ELI H +T + F C C YFS
Sbjct: 512 PSGDKTYT--CDKCARSFRYS-SELIRHEKTHTA-------EKCFECQECRQAFKYFSN- 560
Query: 160 IGCMRSHIRTHTGEKPYACGQCA 182
+R H++TH GEKP+ C QC
Sbjct: 561 ---LRRHLKTHGGEKPFECSQCG 580
>gi|260813270|ref|XP_002601341.1| hypothetical protein BRAFLDRAFT_82748 [Branchiostoma floridae]
gi|229286636|gb|EEN57353.1| hypothetical protein BRAFLDRAFT_82748 [Branchiostoma floridae]
Length = 773
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL--- 195
+RT + + C C+Y + ++ H+ HTGEKPY CG+C +RSA + L H+
Sbjct: 685 MRTHSGQKPYKCDQCNYSAALNSTLKQHLAKHTGEKPYMCGECGYRSAQRSNLAKHMRTH 744
Query: 196 --KKTY 199
KKTY
Sbjct: 745 TGKKTY 750
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H++THTGEKPY CG+C +R+A + L H++
Sbjct: 638 YMCGECGYRTALKYTLSEHMKTHTGEKPYKCGECGYRTAQKSKLSQHMR 686
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 119 AVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAC 178
+T ++L +H +RT + + C CDY S + H+ HTG+KPY C
Sbjct: 588 GYRTTQKSDLSKH-------MRTHTGQRPYKCDQCDYSSAQKSTLDRHLAKHTGDKPYMC 640
Query: 179 GQCAFRSASVAGLHYHLK 196
G+C +R+A L H+K
Sbjct: 641 GECGYRTALKYTLSEHMK 658
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + +H+ HTGEKPY CG+C +R+ L H+K
Sbjct: 377 MRTHTGEKPYKCDQCDYSAARKSTLDNHLLRHTGEKPYMCGECGYRTVQKCDLSKHMK 434
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + H+RTHTGEKPY C QC + +A + L HL K
Sbjct: 137 FMCGECGYRTTQKCDLSKHMRTHTGEKPYKCDQCDYSAAQKSTLDQHLAK 186
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C Y + + H+RTHTGEKPY C QC + +A + L HL
Sbjct: 358 FMCGECGYRTSQKSDLSKHMRTHTGEKPYKCDQCDYSAARKSTLDNHL 405
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTG++PY C QC + SA + L HL K
Sbjct: 582 YMCGECGYRTTQKSDLSKHMRTHTGQRPYKCDQCDYSSAQKSTLDRHLAK 631
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 17/101 (16%)
Query: 114 CIYCKAVLSTNLNELIEH-------CRTC--KSMIRTDPFRHK--------FVCYACDYF 156
C Y A ST L +H C+ C ++ R +RHK ++C C Y
Sbjct: 170 CDYSAAQKSTLDQHLAKHSGEKPYMCKECGYRTADRCYLYRHKKIHNGDKPYMCGECGYR 229
Query: 157 SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ + + H+R HTGEKPY C QC + +A + + H K
Sbjct: 230 TTQMFTLSKHMRIHTGEKPYKCDQCDYSAAQKSAFYRHQAK 270
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY S + H+ HTG+KP+ CG+C +R++ + L H++
Sbjct: 330 YKCDQCDYSSAKKSNLDRHLAKHTGDKPFMCGECGYRTSQKSDLSKHMR 378
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 17/111 (15%)
Query: 95 CKTCSYMIRPN-------ANNTFS-PF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFR 145
C C Y + AN+T PF C C +T +L +H +RT
Sbjct: 111 CDQCDYSAKRKQHLDIHLANHTGDKPFMCGEC-GYRTTQKCDLSKH-------MRTHTGE 162
Query: 146 HKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ H+GEKPY C +C +R+A L+ H K
Sbjct: 163 KPYKCDQCDYSAAQKSTLDQHLAKHSGEKPYMCKECGYRTADRCYLYRHKK 213
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 17/100 (17%)
Query: 114 CIYCKAVLSTNLNELIEH-------CRTC--KSMIRTDPFRH--------KFVCYACDYF 156
C Y A ST N L+ H C C +++ + D +H + C CDY
Sbjct: 391 CDYSAARKSTLDNHLLRHTGEKPYMCGECGYRTVQKCDLSKHMKTHTGEKPYKCDQCDYS 450
Query: 157 SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ + H+ HTG+KPY CG+C +R+A + L H++
Sbjct: 451 AVQKQSLDLHLAKHTGDKPYMCGECGYRTACKSHLSQHMR 490
Score = 43.1 bits (100), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + ++ H+ HT EKPY CG+C +R+A + L H++
Sbjct: 498 YKCDQCDYSATFNSTLKRHLTKHTTEKPYMCGECGYRTARKSDLGKHMR 546
Score = 42.7 bits (99), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 151 YACDYFSYNIG---CMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
Y+CDY Y+ + H+ HTG+KPY CG+C +R+ + L H++
Sbjct: 554 YSCDYCDYSAARKYNLDQHLAKHTGDKPYMCGECGYRTTQKSDLSKHMR 602
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C Y + + H+RTH+G+KPY C QC + +A + L HL K
Sbjct: 666 YKCGECGYRTAQKSKLSQHMRTHSGQKPYKCDQCNYSAALNSTLKQHLAK 715
Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
++C C Y + + H+RTHTGEKPY C QC + +A +
Sbjct: 277 YMCGECGYRTVTKYDLTKHMRTHTGEKPYKCDQCDYSAADKS 318
Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C CDY + + H+ HTG+KP+ CG+C +R+ L H++
Sbjct: 109 YMCDQCDYSAKRKQHLDIHLANHTGDKPFMCGECGYRTTQKCDLSKHMR 157
Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y S + H+RTHTG+K Y C QC + +A + L H K
Sbjct: 722 YMCGECGYRSAQRSNLAKHMRTHTGKKTYKCDQCDYSAAPKSTLDKHYK 770
Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + H H+G+KPY CG+C +R+ + L H++
Sbjct: 249 YKCDQCDYSAAQKSAFYRHQAKHSGDKPYMCGECGYRTVTKYDLTKHMR 297
Score = 39.7 bits (91), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 33/82 (40%), Gaps = 7/82 (8%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C Y A ST L H + D VC C Y + + H+R HTGE
Sbjct: 54 CDYSAAQKSTLDRHLAAH-------SKADAGEKSHVCEDCGYRTARKSHLLQHMRIHTGE 106
Query: 174 KPYACGQCAFRSASVAGLHYHL 195
KPY C QC + + L HL
Sbjct: 107 KPYMCDQCDYSAKRKQHLDIHL 128
Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTG KPY+C C + +A L HL K
Sbjct: 526 YMCGECGYRTARKSDLGKHMRTHTGYKPYSCDYCDYSAARKYNLDQHLAK 575
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
H+R HTGEKPY C QC + +A + L HL
Sbjct: 39 HMRIHTGEKPYKCDQCDYSAAQKSTLDRHL 68
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%)
Query: 151 YACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
Y CD Y+ + + HT +KPY C QC + SA + L HL K
Sbjct: 305 YKCDQCDYSAADKSTRLAKHTNDKPYKCDQCDYSSAKKSNLDRHLAK 351
>gi|260806390|ref|XP_002598067.1| hypothetical protein BRAFLDRAFT_85717 [Branchiostoma floridae]
gi|229283338|gb|EEN54079.1| hypothetical protein BRAFLDRAFT_85717 [Branchiostoma floridae]
Length = 280
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 11/131 (8%)
Query: 72 PTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEH 131
PT++ S + + +D I + N + CK + T IEH
Sbjct: 9 PTEDQSYFDGSPTWVPQVDCDSKASNAQDQIEQDNLNNSGEEPLMCKEYIGTQ----IEH 64
Query: 132 CRTCKS------MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
T +++T + + C CDYFS + H HTGEKPY C +C +R+
Sbjct: 65 YSTVNKTAMDSHLVKTHGEK-AYKCDQCDYFSSKKFNLDQHKTKHTGEKPYECEECGYRT 123
Query: 186 ASVAGLHYHLK 196
A + L H++
Sbjct: 124 ARKSALFLHMR 134
Score = 36.6 bits (83), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYH 194
H+RTHTGE PY C QC + +A L H
Sbjct: 137 HMRTHTGEIPYKCDQCDYSAAQKGTLDIH 165
>gi|195501644|ref|XP_002097881.1| GE26458 [Drosophila yakuba]
gi|194183982|gb|EDW97593.1| GE26458 [Drosophila yakuba]
Length = 951
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 16/126 (12%)
Query: 79 CKHCHSQLS---HLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRT- 134
CK C + HL +CS +N T + C C V L+ L H +
Sbjct: 348 CKICGKDFTRSYHLKRHQKYSSCS------SNETDTMSCKVCDRVF-YRLDNLRSHLKQH 400
Query: 135 CKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+ + P +++C+ C Y++ + HIRTHTGEKP+ C C + +++ L H
Sbjct: 401 LGTQVVKKP---EYMCHTCKNCFYSLSTLNIHIRTHTGEKPFDCDLCDKKFSALVALKKH 457
Query: 195 LKKTYH 200
+ YH
Sbjct: 458 --RRYH 461
>gi|195329034|ref|XP_002031216.1| GM25860 [Drosophila sechellia]
gi|194120159|gb|EDW42202.1| GM25860 [Drosophila sechellia]
Length = 864
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 16/126 (12%)
Query: 79 CKHCHSQLS---HLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRT- 134
CK C + HL +CS +N T + C C V L+ L H +
Sbjct: 270 CKICGKDFTRSYHLKRHQKYSSCS------SNETDTMSCKVCDRVF-YRLDNLRSHLKQH 322
Query: 135 CKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+ + P +++C+ C Y++ + HIRTHTGEKP+ C C + +++ L H
Sbjct: 323 LGTQVVKKP---EYMCHTCKNCFYSLSTLNIHIRTHTGEKPFDCDLCDKKFSALVALKKH 379
Query: 195 LKKTYH 200
+ YH
Sbjct: 380 --RRYH 383
>gi|444716263|gb|ELW57116.1| Zinc finger protein ZFAT [Tupaia chinensis]
Length = 1150
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 223 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 272
Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 225 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 276
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K ++C C+F S L H+++ +
Sbjct: 277 K-FSCDYCSFTCLSKGHLKVHIERVH 301
Score = 37.4 bits (85), Expect = 3.6, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 859 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 909
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 910 DGKQFKCTVCDYTAAQKPQLLRHMEQHASFKPFRCAHCHYSCNMSGSLKRHYNRKH 965
Score = 37.0 bits (84), Expect = 5.1, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 830 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 878
>gi|395546077|ref|XP_003774920.1| PREDICTED: zinc finger protein 711 isoform 2 [Sarcophilus harrisii]
Length = 725
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKT 198
+ + F H VC C + ++ H+RTHTGEKPY C C FR A + L H+K
Sbjct: 462 VHSKSFAH--VCVECGKGFRHPSELKKHMRTHTGEKPYHCHHCIFRCADQSNLKTHMKAK 519
Query: 199 Y 199
+
Sbjct: 520 H 520
>gi|260813262|ref|XP_002601337.1| hypothetical protein BRAFLDRAFT_82753 [Branchiostoma floridae]
gi|229286632|gb|EEN57349.1| hypothetical protein BRAFLDRAFT_82753 [Branchiostoma floridae]
Length = 353
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C+ C Y + G + H++ HTGEKPY C QC + +A + L HL
Sbjct: 245 YMCWECGYRATQKGDLSRHMKKHTGEKPYKCDQCDYSAAQKSTLDSHL 292
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
T P+ +C C Y + + + H+RTHTGE+PY C QC + +A + L++HL K
Sbjct: 298 TKPY---IMCGECGYRTADRRNLHRHMRTHTGERPYKCDQCDYSAAQKSTLNHHLSK 351
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPY-ACGQCAFRSASVAGLHYHLK 196
+ C CDY + + SH+ TH+G KPY CG+C +R+A LH H++
Sbjct: 273 YKCDQCDYSAAQKSTLDSHLATHSGTKPYIMCGECGYRTADRRNLHRHMR 322
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 52/123 (42%), Gaps = 23/123 (18%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKS 137
C+ C+ Q S L L + + P+ C C S L+ L EH T
Sbjct: 107 CEKCNGQFSQLSNL--------KVHMRTHTGEKPYRCEECSRQFS-RLSNLKEHRLT--- 154
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGC---MRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
R PF+ CD Y+ C + H+ HTG+KPY CG+C +R+ L H
Sbjct: 155 HNREKPFK-------CDQCEYSATCKFTLNRHLAKHTGDKPYMCGECGYRATQKCDLSRH 207
Query: 195 LKK 197
+KK
Sbjct: 208 MKK 210
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + H+ HTG+KPY C +C +R+ L H+KK
Sbjct: 217 YKCDQCDYSAAQKSSLDIHLLKHTGDKPYMCWECGYRATQKGDLSRHMKK 266
Score = 36.2 bits (82), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C+ ++ ++SH++THTGEKP+ C C V L H++
Sbjct: 38 YMCEVCNKRFKSLSHLKSHVKTHTGEKPHLCKNCNKSFNQVGHLKKHMR 86
>gi|327277304|ref|XP_003223405.1| PREDICTED: zinc finger protein 711-like [Anolis carolinensis]
Length = 759
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
VC C + ++ H+RTHTGEKPY C C FR A + L H+K +
Sbjct: 504 VCVECGKGFRHPSELKKHMRTHTGEKPYQCQHCVFRCADQSNLKTHIKTKH 554
Score = 35.8 bits (81), Expect = 9.5, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 44/113 (38%), Gaps = 26/113 (23%)
Query: 83 HSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTD 142
HS+ + C+ C + T PF + +LS + +L C+ CK
Sbjct: 635 HSESHKGKKIHQCRHCDF-------KTSDPF-VLSGHILSVHTKDLPFKCKRCKR----- 681
Query: 143 PFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
FR + ++ H++TH+G K Y C C + + +G H+
Sbjct: 682 GFRQQIE-------------LKKHMKTHSGRKVYQCQYCEYSTTDASGFKRHV 721
>gi|301772070|ref|XP_002921455.1| PREDICTED: zinc finger protein 846-like [Ailuropoda melanoleuca]
Length = 482
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT +VC C N + H+RTHTGEKPY C QC +GL HL+
Sbjct: 323 VRTHTGEKPYVCKECGKAFNNSSMLNQHVRTHTGEKPYECKQCGKAFTQSSGLTTHLR 380
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 139 IRTDPFRHKFVCYACDY-FSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C F Y+ C+ H+RTHTGEKPY C +C + L HL+
Sbjct: 407 MRTHTGEKPYKCKECGKAFRYST-CLNIHMRTHTGEKPYECKECGKTFTQSSALAKHLR 464
Score = 39.3 bits (90), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C + +H+RTHTGEK YAC +C A L+ H++
Sbjct: 351 VRTHTGEKPYECKQCGKAFTQSSGLTTHLRTHTGEKAYACKECGKAFARSTNLNMHMR 408
>gi|194900737|ref|XP_001979912.1| GG21375 [Drosophila erecta]
gi|190651615|gb|EDV48870.1| GG21375 [Drosophila erecta]
Length = 950
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 16/126 (12%)
Query: 79 CKHCHSQLS---HLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRT- 134
CK C + HL +CS +N T + C C V L+ L H +
Sbjct: 348 CKICGKDFTRSYHLKRHQKYSSCS------SNETDTMSCKVCDRVF-YRLDNLRSHLKQH 400
Query: 135 CKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+ + P +++C+ C Y++ + HIRTHTGEKP+ C C + +++ L H
Sbjct: 401 LGTQVVKKP---EYMCHTCKNCFYSLSTLNIHIRTHTGEKPFDCDLCDKKFSALVALKKH 457
Query: 195 LKKTYH 200
+ YH
Sbjct: 458 --RRYH 461
>gi|260823070|ref|XP_002604006.1| hypothetical protein BRAFLDRAFT_71705 [Branchiostoma floridae]
gi|229289331|gb|EEN60017.1| hypothetical protein BRAFLDRAFT_71705 [Branchiostoma floridae]
Length = 243
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+R HTGEKPY CG+C +R+ A L H++
Sbjct: 186 YKCDQCDYSATEKSHLDRHLRKHTGEKPYMCGECGYRANYKASLSRHMR 234
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IRT + C CDY + + + H+ HTGEKPY CG+C +R+ + L H++
Sbjct: 84 IRTHTGERPYKCDQCDYSAADKSTLVKHLVKHTGEKPYMCGECGYRTTNKTNLSVHMR 141
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + +H R HTGEKPY CG+C FR+ L H++
Sbjct: 28 MRTHTGEKPYKCDQCDYSAAERTTLANHQRKHTGEKPYMCGECGFRTTRKFRLSAHIR 85
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A L H +K
Sbjct: 9 YMCGECGYKTAKKSTLSRHMRTHTGEKPYKCDQCDYSAAERTTLANHQRK 58
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 11/82 (13%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C Y A ST + L++H P+ +C C Y + N + H+RTHTGE
Sbjct: 98 CDYSAADKSTLVKHLVKH-------TGEKPY----MCGECGYRTTNKTNLSVHMRTHTGE 146
Query: 174 KPYACGQCAFRSASVAGLHYHL 195
KPY C QC + + L H+
Sbjct: 147 KPYKCDQCDYSATQKINLVQHM 168
Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + +HIRTHTGE+PY C QC + +A + L HL K
Sbjct: 65 YMCGECGFRTTRKFRLSAHIRTHTGERPYKCDQCDYSAADKSTLVKHLVK 114
>gi|260835614|ref|XP_002612803.1| hypothetical protein BRAFLDRAFT_233149 [Branchiostoma floridae]
gi|229298183|gb|EEN68812.1| hypothetical protein BRAFLDRAFT_233149 [Branchiostoma floridae]
Length = 243
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C Y + + SH THTGEKPY CG+C +R+A + L H++
Sbjct: 91 MRTHTGEKPYKCDRCGYSAAQKANLVSHQATHTGEKPYMCGECGYRTAQRSNLSRHMR 148
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HTGEKPY C QC + +A + L+ HL K
Sbjct: 16 YMCGECGYRTVKKDTLSRHMRIHTGEKPYKCDQCDYSAARKSSLNRHLAK 65
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + HI T HTGEKPY CG+C +R+A + L H++
Sbjct: 147 MRTHTEEKPYKCDQCDYSASQKANLDYHIATKHTGEKPYMCGECGYRTAMRSDLPKHMR 205
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
F+C C Y + + + H+RTHTGEKPY C +C + +A A L
Sbjct: 72 FMCGECGYRTDDKTKLSKHMRTHTGEKPYKCDRCGYSAAQKANL 115
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHT EKPY C QC + ++ A L YH+
Sbjct: 128 YMCGECGYRTAQRSNLSRHMRTHTEEKPYKCDQCDYSASQKANLDYHI 175
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKP+ CG+C +R+ L H++
Sbjct: 44 YKCDQCDYSAARKSSLNRHLAKHTGEKPFMCGECGYRTDDKTKLSKHMR 92
>gi|260787859|ref|XP_002588969.1| hypothetical protein BRAFLDRAFT_125437 [Branchiostoma floridae]
gi|229274141|gb|EEN44980.1| hypothetical protein BRAFLDRAFT_125437 [Branchiostoma floridae]
Length = 233
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C CDY + G + H+ HTG+KPY CG+C +R+ + L H+++
Sbjct: 1 MRTHSGEKPYKCEQCDYSAARKGSLDQHLAKHTGDKPYMCGECEYRTVLKSDLSRHIRR 59
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C+Y + + HIRTHTG+KPY C QC + +A + L HL K
Sbjct: 150 YMCGECEYSTALKSDLSRHIRTHTGDKPYKCDQCDYSAAQKSHLDSHLAK 199
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + SH+ HTG+KPY CG+C +R+A + + H++
Sbjct: 66 YKCDQCDYSAAQKSHLDSHLANHTGDKPYMCGECGYRTAIKSYISQHMR 114
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C+Y + + HIR HTG+KPY C QC + +A + L HL
Sbjct: 38 YMCGECEYRTVLKSDLSRHIRRHTGDKPYKCDQCDYSAAQKSHLDSHL 85
>gi|326678088|ref|XP_002666167.2| PREDICTED: zinc finger protein 271-like [Danio rerio]
Length = 475
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT +VC C+ +G +++H R HTGEKPY C +C + +AGL+ H+
Sbjct: 384 KRHMRTHTGEKPYVCSHCNKRFGQLGGLKTHERIHTGEKPYTCTECGKSFSQLAGLNEHM 443
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+FVC+ C+ ++ H+RTHTGEKPY C C R + GL H +
Sbjct: 367 EFVCFMCEKTFIRAAELKRHMRTHTGEKPYVCSHCNKRFGQLGGLKTHER 416
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ VC+ C G ++ H HTGEKPY C C R + GL H +
Sbjct: 224 ELVCFECGKSFIRAGDLKQHQMNHTGEKPYVCSHCNKRFGHLGGLKTHER 273
Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 20/36 (55%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
+FVC C+ G +R H R HTGEKPY C C
Sbjct: 84 EFVCSECEKSFIKAGDLRRHQRIHTGEKPYRCSHCE 119
Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 12/72 (16%)
Query: 121 LSTNLNELIEHCRTC-KSMIRTDPFRH---------KFVCYACDYFSYNIGCMRSHIRTH 170
+ T + EL+ C C KS IR + +VC C+ ++G +++H R H
Sbjct: 218 IHTGVRELV--CFECGKSFIRAGDLKQHQMNHTGEKPYVCSHCNKRFGHLGGLKTHERIH 275
Query: 171 TGEKPYACGQCA 182
TGEKPY C QC
Sbjct: 276 TGEKPYTCIQCG 287
>gi|301625950|ref|XP_002942163.1| PREDICTED: zinc finger and SCAN domain-containing protein 21-like
[Xenopus (Silurana) tropicalis]
Length = 620
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F+C C Y +R H ++HTGEKP++C +C + + V LH H K
Sbjct: 552 FICMECGKSFYENSDLRKHKKSHTGEKPFSCPECGRKFSLVCNLHKHRK 600
>gi|260811185|ref|XP_002600303.1| hypothetical protein BRAFLDRAFT_118282 [Branchiostoma floridae]
gi|229285589|gb|EEN56315.1| hypothetical protein BRAFLDRAFT_118282 [Branchiostoma floridae]
Length = 528
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 17/101 (16%)
Query: 107 NNTFSPFCIYCKAVLSTNLNELIEHCRTC--KSMIRTDPFRHK--------FVCYACDYF 156
N+ FSP L N E C C ++ +R+D RH+ + C CD+
Sbjct: 341 NDNFSP-------NLVKNGGEKPHSCGECGYRTAVRSDLARHEVKHADEKPYSCNQCDFS 393
Query: 157 SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ + +H+ HTGEKPY CG+C +R+A + L H+ +
Sbjct: 394 TKWKLSLHNHMVMHTGEKPYMCGECGYRTAYRSTLTKHMAR 434
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 17/100 (17%)
Query: 107 NNTFSPFCIYCKAVLSTNLNELIEHCRTC--KSMIRTDPFRHK--------FVCYACDYF 156
N+ FSP L N E C C ++ +R+D RHK + C CD+
Sbjct: 229 NDNFSP-------NLVKNGGEKPHSCGECGYRTAVRSDLARHKVKHADEKPYSCNQCDFS 281
Query: 157 SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ + +H+ HTGEKPY C C FR++ + L H++
Sbjct: 282 TKWKLSLHNHMVVHTGEKPYMCKDCGFRASYRSTLTKHMR 321
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTG+KPY CG+C +R+A L H++
Sbjct: 472 RHECDQCDYSTARKSDLERHMAKHTGKKPYMCGKCGYRAAQKTQLSRHMR 521
Score = 42.7 bits (99), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 129 IEHCRTCK--SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
+E RT K S D + VC C Y + M H+R HTGEKPY C QC + +A
Sbjct: 57 LEMARTGKKDSQKAQDSVKTSSVCGECGYRAARSH-MVIHMRKHTGEKPYKCNQCDYSAA 115
Query: 187 SVAGLHYHL-----KKTY 199
+ L+ H+ KKTY
Sbjct: 116 RKSNLNKHMARHAGKKTY 133
Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + H+ H G+K Y CG+C +R+ + + L H +K
Sbjct: 105 YKCNQCDYSAARKSNLNKHMARHAGKKTYVCGECGYRTDTRSHLAQHERK 154
Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+VC C Y + + H R HT EKPY+C QC F + L+ H+
Sbjct: 133 YVCGECGYRTDTRSHLAQHERKHTEEKPYSCDQCDFSTKWKLSLNNHM 180
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CD+ + + +H+ HTGEKPY C C FR++ + L H++
Sbjct: 161 YSCDQCDFSTKWKLSLNNHMVVHTGEKPYMCKDCGFRASYRSTLTKHMR 209
Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 148 FVCYACDYFSYNIGCMRSH----IRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C CDY + G + H +R H GEK + C QC + +A + L H+ K
Sbjct: 441 FKCDQCDYSAALKGSLAQHKDRHMRKHIGEKRHECDQCDYSTARKSDLERHMAK 494
>gi|260782904|ref|XP_002586520.1| hypothetical protein BRAFLDRAFT_139771 [Branchiostoma floridae]
gi|229271635|gb|EEN42531.1| hypothetical protein BRAFLDRAFT_139771 [Branchiostoma floridae]
Length = 247
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C+ C Y + + H+RTHTGEKPY C QC + +A + L HL K
Sbjct: 19 YICWECGYRAAYKYALSRHMRTHTGEKPYKCDQCDYSAAQKSHLDQHLAK 68
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTG+KPY C QC + +A + L+ HL K
Sbjct: 187 YMCGKCGYMTDRKSDLSRHMRTHTGDKPYKCDQCDYSAAQKSSLNQHLAK 236
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KPY CG+C + + +GL H++
Sbjct: 38 MRTHTGEKPYKCDQCDYSAAQKSHLDQHLAKHTGDKPYMCGECGYVTDRKSGLSRHMR 95
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHT +KPY C QC + +A + L +HL K
Sbjct: 75 YMCGECGYVTDRKSGLSRHMRTHTDDKPYKCDQCDYSAAQKSSLDHHLAK 124
Score = 39.3 bits (90), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + C CDY + + H+ HTG KPY C +C +R+ + L H+
Sbjct: 94 MRTHTDDKPYKCDQCDYSAAQKSSLDHHLAKHTGNKPYMCEECGYRTTKKSHLSDHM 150
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+ HTGEKPY C C F +A + L HL K
Sbjct: 131 YMCEECGYRTTKKSHLSDHMIIHTGEKPYKCDLCDFSAAKKSNLDQHLAK 180
Score = 36.2 bits (82), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CD+ + + H+ HTG KPY CG+C + + + L H++
Sbjct: 159 YKCDLCDFSAAKKSNLDQHLAKHTGYKPYMCGKCGYMTDRKSDLSRHMR 207
>gi|195134803|ref|XP_002011826.1| GI14365 [Drosophila mojavensis]
gi|193909080|gb|EDW07947.1| GI14365 [Drosophila mojavensis]
Length = 451
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
FVC +C Y N +R H+R+HTGE+P+ C C R S +GL H+
Sbjct: 338 FVCESCGYSCRNKETLRVHLRSHTGERPFGCKVCDKRFPSHSGLREHM 385
>gi|403284784|ref|XP_003933735.1| PREDICTED: zinc finger protein ZFAT isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1243
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 271 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCTQCSYASAIKANLNVHLRK 320
Score = 40.0 bits (92), Expect = 0.50, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 273 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCTQCSYASAIKANLNVHLRKHTGE 324
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 325 K-FACDYCSFTCLSKGHLKVHIERVH 349
Score = 36.6 bits (83), Expect = 6.1, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 882 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 930
Score = 36.6 bits (83), Expect = 6.1, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 911 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 961
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 962 DGKQFKCTVCDYTAAQKPQLLRHMEQHVSFKPFRCAHCHYSCNISGSLKRHYNRKH 1017
>gi|260835928|ref|XP_002612959.1| hypothetical protein BRAFLDRAFT_213194 [Branchiostoma floridae]
gi|229298341|gb|EEN68968.1| hypothetical protein BRAFLDRAFT_213194 [Branchiostoma floridae]
Length = 391
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C+ CDY + + +H++ HTGEKPY C +C +R+ + L H++K
Sbjct: 91 MRTHTGEKPYKCHQCDYSARQQSALDNHLKRHTGEKPYICRECGYRTITKTNLVRHMRK 149
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT + C+ CDY + + +H++ HTGEKPY C +C +R+ + L H++K
Sbjct: 288 MRTHTGEKPYKCHQCDYSARQQSALDNHLKRHTGEKPYICRECGYRTITKTNLLRHMRK 346
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + +H+RTHTGEKPY C QC + + + L HLK+
Sbjct: 72 YMCGECGYRTDYHSHLSNHMRTHTGEKPYKCHQCDYSARQQSALDNHLKR 121
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + +H+RTHTGEKPY C QC + + + L HLK+
Sbjct: 269 YMCGECGYRTDYHSHLSNHMRTHTGEKPYKCHQCDYSARQQSALDNHLKR 318
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+R HTGEKP+AC C + +A L H+
Sbjct: 128 YICRECGYRTITKTNLVRHMRKHTGEKPHACDHCNYSTADKGNLERHI 175
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+R HTGEKP+AC C + +A L H+
Sbjct: 325 YICRECGYRTITKTNLLRHMRKHTGEKPHACDFCNYSTADKGTLERHI 372
>gi|260789345|ref|XP_002589707.1| hypothetical protein BRAFLDRAFT_100834 [Branchiostoma floridae]
gi|229274889|gb|EEN45718.1| hypothetical protein BRAFLDRAFT_100834 [Branchiostoma floridae]
Length = 714
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA--FRSASVAGL 191
+C+ +RT + C C +G +RSH+RTHTGEKPY C +C+ FR S
Sbjct: 554 SCRRHMRTHTGEKPYSCEECGKQFIELGGLRSHMRTHTGEKPYNCKECSRQFRQPSALKS 613
Query: 192 H 192
H
Sbjct: 614 H 614
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 139 IRTDPFRHKFVCYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C FS + C R H+RTHTGEKPY+C +C + + GL H++
Sbjct: 531 MRTHTGEKPYRCEKCGKQFSDSSSCRR-HMRTHTGEKPYSCEECGKQFIELGGLRSHMR 588
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA--FRSASVAGLH 192
+ CY C +++ + +H+RTH+GEKPY C +C F + S H
Sbjct: 64 YRCYVCGKKFFDVTHLLAHVRTHSGEKPYKCEECGSQFNTPSARKRH 110
Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 151 YACDYFSYN---IGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
Y CD S + C+ +H++TH+GEKPY C +C +++ L H+
Sbjct: 428 YKCDQCSKEYSVLSCLNAHLKTHSGEKPYMCEKCGMCYRTMSRLKEHM 475
Score = 36.6 bits (83), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C ++ H+ THTGEKPY C QC+ + ++ L+ HLK
Sbjct: 400 YGCKECGKQFSQASNLKQHMFTHTGEKPYKCDQCSKEYSVLSCLNAHLK 448
>gi|443706730|gb|ELU02644.1| hypothetical protein CAPTEDRAFT_114378, partial [Capitella teleta]
Length = 126
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + +R H+RTHTGEKPY C C + +A + L HL++
Sbjct: 62 YKCDKCDYATVERSHLRVHMRTHTGEKPYKCEYCDYATAQNSTLKIHLRR 111
>gi|432848801|ref|XP_004066458.1| PREDICTED: oocyte zinc finger protein XlCOF6-like [Oryzias latipes]
Length = 288
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 56/120 (46%), Gaps = 19/120 (15%)
Query: 79 CKHCHSQLSH-LDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
CK C S + LDL H +R +A PF C C + S + + LI H
Sbjct: 180 CKECESSFNQILDLKTH-------MRTHAGE--RPFSCKECDSGFS-HRSSLITH----- 224
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CD ++ ++ H+RTHTGEKP++C +C + + L H+K
Sbjct: 225 --MRTHTGEKPFSCKECDKRFISVSNLKKHMRTHTGEKPFSCNECKRSFSYSSHLKRHMK 282
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
CK C S + L ++M FS C C++ + N++++ K+
Sbjct: 152 CKECEKSFSSVSNLK-----THMRTHGGETPFS--CKECES----SFNQILD----LKTH 196
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CD + + +H+RTHTGEKP++C +C R SV+ L H++
Sbjct: 197 MRTHAGERPFSCKECDSGFSHRSSLITHMRTHTGEKPFSCKECDKRFISVSNLKKHMR 254
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT F C CD + +++H+RTHTGEKP+ C +C SV+ L H+
Sbjct: 1 MRTHTGEKPFSCEECDTSFRHRSSLKTHMRTHTGEKPFTCKECEKTFTSVSNLKTHM 57
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT F C C+ ++ ++ H RTHTGEKP++C +C + + L H+
Sbjct: 82 KTHMRTHTEEMPFSCKECEKSFNSVSNLKKHTRTHTGEKPFSCKECKKSFSYSSNLKRHM 141
Query: 196 K 196
+
Sbjct: 142 R 142
Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 112 PF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
PF C CK S + N L H +RT F C C+ ++ +++H+RTH
Sbjct: 121 PFSCKECKKSFSYSSN-LKRH-------MRTHTGEKPFTCKECEKSFSSVSNLKTHMRTH 172
Query: 171 TGEKPYACGQCAFRSASVAGLHYHLK 196
GE P++C +C + L H++
Sbjct: 173 GGETPFSCKECESSFNQILDLKTHMR 198
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT F C C+ ++ +++H+ THTGEKP++C +C + L H+
Sbjct: 26 KTHMRTHTGEKPFTCKECEKTFTSVSNLKTHMITHTGEKPFSCKECESSFYQRSSLKTHM 85
Query: 196 K 196
+
Sbjct: 86 R 86
>gi|321450001|gb|EFX62197.1| hypothetical protein DAPPUDRAFT_68142 [Daphnia pulex]
Length = 180
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C +C + +T+ EL+ H R P R C CDY S + ++ H+R HTGE
Sbjct: 75 CKHCHSSFTTS-GELVRHVRY--RHTHEKPHR----CTECDYASVELSKLKRHMRCHTGE 127
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
+PY C C + S L HL+
Sbjct: 128 RPYQCPHCTYASPDTFKLKRHLR 150
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 47/107 (43%), Gaps = 16/107 (14%)
Query: 79 CKHCHSQLS-HLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKS 137
CKHCHS + +L+ H +R + C C S L++L H R C +
Sbjct: 75 CKHCHSSFTTSGELVRH-------VRYRHTHEKPHRCTECD-YASVELSKLKRHMR-CHT 125
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFR 184
R + C C Y S + ++ H+R HTGEKPY C C R
Sbjct: 126 GERP------YQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHAR 166
>gi|281337422|gb|EFB13006.1| hypothetical protein PANDA_010342 [Ailuropoda melanoleuca]
Length = 466
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT +VC C N + H+RTHTGEKPY C QC +GL HL+
Sbjct: 318 VRTHTGEKPYVCKECGKAFNNSSMLNQHVRTHTGEKPYECKQCGKAFTQSSGLTTHLR 375
Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 139 IRTDPFRHKFVCYACDY-FSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C F Y+ C+ H+RTHTGEKPY C +C + L HL+
Sbjct: 402 MRTHTGEKPYKCKECGKAFRYST-CLNIHMRTHTGEKPYECKECGKTFTQSSALAKHLR 459
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C + +H+RTHTGEK YAC +C A L+ H++
Sbjct: 346 VRTHTGEKPYECKQCGKAFTQSSGLTTHLRTHTGEKAYACKECGKAFARSTNLNMHMR 403
>gi|432957828|ref|XP_004085899.1| PREDICTED: oocyte zinc finger protein XlCOF22-like, partial
[Oryzias latipes]
Length = 304
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
CK C S + L ++M FS C CK S ++ L H
Sbjct: 78 CKECKKGFSRISFLQ-----THMRTHTGERPFS--CKECKKSFS-KISHLQTH------- 122
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C C I +++H+RTHTGE+P++C +C + ++ L H++
Sbjct: 123 MRTHTGERPFSCKECKKSFSQISALQTHMRTHTGERPFSCKECKKSFSQISNLQRHMR 180
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 112 PF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
PF C CK S + ++L +H +RT F C C I +++H+RTH
Sbjct: 47 PFSCKECKKSFSCS-SDLKKH-------MRTHTGERPFSCKECKKGFSRISFLQTHMRTH 98
Query: 171 TGEKPYACGQCAFRSASVAGLHYHLK 196
TGE+P++C +C + ++ L H++
Sbjct: 99 TGERPFSCKECKKSFSKISHLQTHMR 124
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 59/144 (40%), Gaps = 20/144 (13%)
Query: 54 SLDQILNLNLSVLLVTTIPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF 113
S QI NL + + T + CK C S + L IR + PF
Sbjct: 168 SFSQISNLQRHMRIHTG---EKPFSCKECKKSFSRISTLK------THIRTHTGE--KPF 216
Query: 114 -CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTG 172
C CK S + + L +H + T F C C I +++H+RTHTG
Sbjct: 217 SCKECKKSFSCS-SALKKH-------MTTHTGEKPFSCKECKKCFSQISNLKTHMRTHTG 268
Query: 173 EKPYACGQCAFRSASVAGLHYHLK 196
EKP++C +C + + L H++
Sbjct: 269 EKPFSCKECKKSFSCSSALKKHMR 292
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 52/139 (37%), Gaps = 29/139 (20%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEH------- 131
CK C S + L ++M FS C CK S ++ L H
Sbjct: 134 CKECKKSFSQISALQ-----THMRTHTGERPFS--CKECKKSFS-QISNLQRHMRIHTGE 185
Query: 132 ----CRTCKSM----------IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA 177
C+ CK IRT F C C ++ H+ THTGEKP++
Sbjct: 186 KPFSCKECKKSFSRISTLKTHIRTHTGEKPFSCKECKKSFSCSSALKKHMTTHTGEKPFS 245
Query: 178 CGQCAFRSASVAGLHYHLK 196
C +C + ++ L H++
Sbjct: 246 CKECKKCFSQISNLKTHMR 264
Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++SH+RTHTGE+P++C +C + + L H++
Sbjct: 35 LKSHMRTHTGERPFSCKECKKSFSCSSDLKKHMR 68
>gi|281338532|gb|EFB14116.1| hypothetical protein PANDA_011448 [Ailuropoda melanoleuca]
Length = 982
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 267 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 316
Score = 39.7 bits (91), Expect = 0.64, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 269 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 320
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 321 K-FACDYCSFTCLSKGHLKVHIERVH 345
Score = 36.6 bits (83), Expect = 5.7, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 872 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 920
>gi|426360783|ref|XP_004047612.1| PREDICTED: zinc finger protein ZFAT [Gorilla gorilla gorilla]
Length = 1271
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 313 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 362
Score = 39.7 bits (91), Expect = 0.64, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 315 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 366
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 367 K-FACDYCSFTCLSKGHLKVHIERVH 391
Score = 36.6 bits (83), Expect = 5.3, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 953 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 1003
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 1004 DGKQFKCTVCDYTAAQKPQLLRHMEQHVSFKPFRCAHCHYSCNISGSLKRHYNRKH 1059
Score = 36.6 bits (83), Expect = 5.7, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 924 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 972
>gi|395840114|ref|XP_003792910.1| PREDICTED: zinc finger protein ZFAT isoform 1 [Otolemur garnettii]
Length = 1179
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 209 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 258
Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 211 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 262
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 263 K-FACDCCSFTCLSKGHLKVHVERVH 287
Score = 37.0 bits (84), Expect = 4.8, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 848 CTLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 898
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 899 DGKQFKCTVCDYTAAQKPQLLRHMEQHVSFKPFRCAHCPYSCNISGSLKRHYNRKH 954
Score = 36.2 bits (82), Expect = 8.1, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 819 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCTLCEYATRSKSNLKAHMNR 867
>gi|260794957|ref|XP_002592473.1| hypothetical protein BRAFLDRAFT_113832 [Branchiostoma floridae]
gi|229277693|gb|EEN48484.1| hypothetical protein BRAFLDRAFT_113832 [Branchiostoma floridae]
Length = 512
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%)
Query: 124 NLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
N N+ H T + +RT + C C+ +G ++ H+RTHTGEKPY C +C
Sbjct: 42 NCNKSFSHMDTLRKHMRTHTGEKPYRCEQCEKQFSELGSLKRHVRTHTGEKPYRCEECNK 101
Query: 184 RSASVAGLHYHLK 196
+ L H++
Sbjct: 102 QFTDSGSLKKHMR 114
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 133 RTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLH 192
R +S +RT + C C+ ++ +R H+RTHTGEKPY C QC + + + L
Sbjct: 23 RELESHMRTHTGEQPYSCENCNKSFSHMDTLRKHMRTHTGEKPYRCEQCEKQFSELGSLK 82
Query: 193 YHLK 196
H++
Sbjct: 83 RHVR 86
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C + G H+RTHTGEKPY C QC+ + + + L H+K
Sbjct: 340 VRTHTGEKPYSCLKCSKRFSDRGHRNKHMRTHTGEKPYRCEQCSKQFSQLGNLRRHIK 397
Score = 42.4 bits (98), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + C C +G +R HI+THTGEKP+ C +C+ + + + L+ H+
Sbjct: 368 MRTHTGEKPYRCEQCSKQFSQLGNLRRHIKTHTGEKPFRCEKCSKQFSQLVALNRHM 424
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C+ ++ H++THTGEKPY C +C R + + L H+
Sbjct: 166 KKHMRTHTGEKPYSCKECNKQFSQSSQLKEHVKTHTGEKPYKCEKCDKRCSKLGNLKSHM 225
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C+ G + H+RTHTGEKPY C +C+ + ++++ L H+
Sbjct: 110 KKHMRTHTGEKPYRCEKCNKQFTISGNLNKHMRTHTGEKPYTCEKCSKQFSALSSLKKHM 169
Query: 196 K 196
+
Sbjct: 170 R 170
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CD + + HIRTHTGEKP+ C C R A L H+K
Sbjct: 433 YPCDTCDKRFNDPSSLTKHIRTHTGEKPFKCETCDKRFAESGTLKKHMK 481
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C + ++ H+RTHTGEKPY+C +C + + + L H+K
Sbjct: 141 MRTHTGEKPYTCEKCSKQFSALSSLKKHMRTHTGEKPYSCKECNKQFSQSSQLKEHVK 198
>gi|260804231|ref|XP_002596992.1| hypothetical protein BRAFLDRAFT_58403 [Branchiostoma floridae]
gi|229282253|gb|EEN53004.1| hypothetical protein BRAFLDRAFT_58403 [Branchiostoma floridae]
Length = 458
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 13/81 (16%)
Query: 119 AVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDY---FSYNIGCMRSHIRTHTGEKP 175
+T ++L EH +RT R + C CDY YN+G H+ HTG+KP
Sbjct: 54 GYRTTQKSDLSEH-------MRTHTGRKSYKCNQCDYSAAHKYNLG---RHLAKHTGDKP 103
Query: 176 YACGQCAFRSASVAGLHYHLK 196
Y CG+C +R+ + L H++
Sbjct: 104 YMCGECGYRTVQKSHLFDHMR 124
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A + + YHL K
Sbjct: 181 YMCGECGYRTAKKSHLSDHMRTHTGEKPYKCDQCDYSAAKKSHVDYHLAK 230
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 10/104 (9%)
Query: 95 CKTCSYMI-RPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYA 152
C C + R AN+ P+ C C + + L +H +RT + C
Sbjct: 162 CGECGFRTSRSEANSGEKPYMCGEC-GYRTAKKSHLSDH-------MRTHTGEKPYKCDQ 213
Query: 153 CDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
CDY + + H+ HTG+KPY CG+C +R+A + L H++
Sbjct: 214 CDYSAAKKSHVDYHLAKHTGDKPYMCGKCEYRTAHKSHLSRHMR 257
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGEKPY C QC + +A + L+ HL
Sbjct: 349 YMCEECGYRAAQKSHLSRHMRTHTGEKPYKCDQCDYSAAQTSTLNQHL 396
Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
+RT + C CDY + + H+ HTGEKPY CG+C +R+
Sbjct: 368 MRTHTGEKPYKCDQCDYSAAQTSTLNQHLVMHTGEKPYMCGECGYRT 414
Score = 42.7 bits (99), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y +Y + H+ THTG+KPY C QC + SA+ L H+ K
Sbjct: 405 YMCGECGYRTYRKCHLSEHMSTHTGDKPYKCDQCDYSSATKFNLDRHVSK 454
Score = 42.4 bits (98), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CDYF+ + H+ HTGEK Y C +C +R+A + L H++
Sbjct: 321 FKCEQCDYFAARKYHLDRHLAKHTGEKSYMCEECGYRAAQKSHLSRHMR 369
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+R HTGEKPY C QC + ++ + L YHL
Sbjct: 104 YMCGECGYRTVQKSHLFDHMRIHTGEKPYKCDQCDYSASKKSILDYHL 151
Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
+ C CDY + + H+ THT +KPY CG+C FR++
Sbjct: 132 YKCDQCDYSASKKSILDYHLATHTDDKPYMCGECGFRTS 170
Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
+RT + + C CDY + + + H HTG KPY CG+C +R+A
Sbjct: 256 MRTHTRQKPYKCEKCDYSAASKYQLDQHQAKHTGYKPYMCGECGYRTA 303
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTG K Y C QC + +A L HL K
Sbjct: 48 YMCGECGYRTTQKSDLSEHMRTHTGRKSYKCNQCDYSAAHKYNLGRHLAK 97
>gi|260791422|ref|XP_002590728.1| hypothetical protein BRAFLDRAFT_89534 [Branchiostoma floridae]
gi|229275924|gb|EEN46739.1| hypothetical protein BRAFLDRAFT_89534 [Branchiostoma floridae]
Length = 360
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + + C CDY + + H+ HTGEKPY CG+C +R+ L H+K
Sbjct: 136 MRTHTGKKPYKCNQCDYSAAVKSTLDKHLTKHTGEKPYMCGECGYRTGDKRNLSRHMK 193
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKPY CG+C +R+A L H++
Sbjct: 201 YKCDQCDYSAAQKSNLDQHVAKHTGEKPYMCGECGYRTARRDNLSLHMR 249
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C Y + G + H+RTHTGEKPY C QC + +A + L HL
Sbjct: 285 FMCGECGYRTAFRGSLSRHMRTHTGEKPYKCDQCDYSAALKSTLKGHL 332
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 121 LSTNLNELIEHCRTCKSM-----IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKP 175
+ T+ E C CK +RT + C CDY + + H+ +TGEKP
Sbjct: 57 MRTHTGEKPYKCDQCKRSDLSRHMRTHTGEKPYKCDQCDYSATQKSHLEQHVAKNTGEKP 116
Query: 176 YACGQCAFRSASVAGLHYHLK 196
Y CG+C R+A + L H++
Sbjct: 117 YMCGECGHRTAHKSNLTQHMR 137
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H HTGEKPY CG+C R+A L H++
Sbjct: 1 MRTHTGEKPYKCDQCDYSTAQKHHLDQHRTKHTGEKPYMCGECGHRAARKGDLSKHMR 58
Score = 43.1 bits (100), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ H+GEKP+ CG+C +R+A L H++
Sbjct: 248 MRTHTGEKPYKCDHCDYSAAQKCHLNEHLAKHSGEKPFMCGECGYRTAFRGSLSRHMR 305
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C C + +A L+ HL K
Sbjct: 229 YMCGECGYRTARRDNLSLHMRTHTGEKPYKCDHCDYSAAQKCHLNEHLAK 278
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + + H+RTHTG+KPY C QC + +A + L HL K
Sbjct: 117 YMCGECGHRTAHKSNLTQHMRTHTGKKPYKCNQCDYSAAVKSTLDKHLTK 166
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
++C C + + G + H+RTHTGEKPY C QC
Sbjct: 38 YMCGECGHRAARKGDLSKHMRTHTGEKPYKCDQC 71
Score = 39.7 bits (91), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 10/51 (19%)
Query: 151 YACDYFSYNIGCMRS----HIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
Y CD C RS H+RTHTGEKPY C QC + + + L H+ K
Sbjct: 66 YKCDQ------CKRSDLSRHMRTHTGEKPYKCDQCDYSATQKSHLEQHVAK 110
>gi|149030031|gb|EDL85123.1| rCG40880 [Rattus norvegicus]
Length = 239
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ HIR+HTGE+P+ C QCA+ S
Sbjct: 5 TSGELVRHRRYKHTHEKPFKCSLCKYASVEASKLKRHIRSHTGERPFQCSQCAYASKDTY 64
Query: 190 GLHYHLK 196
L H++
Sbjct: 65 KLKRHMR 71
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 10/81 (12%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC A L++H RT K+ KF C CDY C+ +H+RTHTGE
Sbjct: 141 CRYCPAAFHERYA-LLQHQRTHKNEK-------KFKCKQCDYACKQERCLTAHMRTHTGE 192
Query: 174 KPYACGQC--AFRSASVAGLH 192
+P++C C FR + +H
Sbjct: 193 RPFSCLTCNKHFRQKQLLTVH 213
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IR+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 39 KRHIRSHTGERPFQCSQCAYASKDTYKLKRHMRTHSGEKPYECPTCHARFTQSGTMKIHI 98
Query: 196 KKTY 199
+ +
Sbjct: 99 AQKH 102
>gi|426392248|ref|XP_004062468.1| PREDICTED: transcriptional repressor CTCFL isoform 4 [Gorilla
gorilla gorilla]
Length = 573
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 324 TSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 383
Query: 190 GLHYHLK 196
L H++
Sbjct: 384 KLKRHMR 390
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H +T K+ R F C C Y M +HIRTHTGE
Sbjct: 460 CRYCSAVFHERYA-LIQHQKTHKNEKR-------FKCKHCSYACKQERHMTAHIRTHTGE 511
Query: 174 KPYACGQCA--FRSASVAGLHYHLKKTYH 200
KP+ C C FR + H+ + YH
Sbjct: 512 KPFTCLFCNKCFRQKQLLNAHF---RKYH 537
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +R+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 358 KRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEKPYECHICHTRFTQSGTMKIHI 417
>gi|68533515|gb|AAH98405.1| ZFAT protein [Homo sapiens]
Length = 1204
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 307 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 356
Score = 39.7 bits (91), Expect = 0.65, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 309 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 360
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 361 K-FACDYCSFTCLSKGHLKVHIERVH 385
Score = 36.6 bits (83), Expect = 5.4, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 947 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 997
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 998 DGKQFKCTVCDYTAAQKPQLLRHMEQHVSFKPFRCAHCHYSCNISGSLKRHYNRKH 1053
Score = 36.6 bits (83), Expect = 5.7, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 918 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 966
>gi|403284788|ref|XP_003933737.1| PREDICTED: zinc finger protein ZFAT isoform 4 [Saimiri boliviensis
boliviensis]
Length = 1184
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 298 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCTQCSYASAIKANLNVHLRK 347
Score = 40.0 bits (92), Expect = 0.54, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 300 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCTQCSYASAIKANLNVHLRKHTGE 351
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 352 K-FACDYCSFTCLSKGHLKVHIERVH 376
Score = 36.6 bits (83), Expect = 6.5, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 909 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 957
Score = 36.6 bits (83), Expect = 6.5, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 938 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 988
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 989 DGKQFKCTVCDYTAAQKPQLLRHMEQHVSFKPFRCAHCHYSCNISGSLKRHYNRKH 1044
>gi|403284786|ref|XP_003933736.1| PREDICTED: zinc finger protein ZFAT isoform 3 [Saimiri boliviensis
boliviensis]
Length = 1181
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 209 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCTQCSYASAIKANLNVHLRK 258
Score = 40.0 bits (92), Expect = 0.54, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 211 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCTQCSYASAIKANLNVHLRKHTGE 262
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 263 K-FACDYCSFTCLSKGHLKVHIERVH 287
Score = 36.6 bits (83), Expect = 6.4, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 849 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 899
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 900 DGKQFKCTVCDYTAAQKPQLLRHMEQHVSFKPFRCAHCHYSCNISGSLKRHYNRKH 955
Score = 36.6 bits (83), Expect = 6.5, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 820 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 868
>gi|296227174|ref|XP_002759250.1| PREDICTED: zinc finger protein ZFAT [Callithrix jacchus]
Length = 1267
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 271 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCTQCSYASAIKANLNVHLRK 320
Score = 40.0 bits (92), Expect = 0.54, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 273 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCTQCSYASAIKANLNVHLRKHTGE 324
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 325 K-FACDYCSFTCLSKGHLKVHIERVH 349
Score = 36.6 bits (83), Expect = 6.4, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 911 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 961
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 962 DGKQFKCTVCDYTAAQKPQLLRHMEQHVSFKPFRCAHCHYSCNISGSLKRHYNRKH 1017
Score = 36.6 bits (83), Expect = 6.5, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 882 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 930
>gi|260795637|ref|XP_002592811.1| hypothetical protein BRAFLDRAFT_275668 [Branchiostoma floridae]
gi|229278035|gb|EEN48822.1| hypothetical protein BRAFLDRAFT_275668 [Branchiostoma floridae]
Length = 709
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
KS +RT + C C +G ++SH+RTHTGEKPY C +C+ + + + L H+
Sbjct: 502 KSHMRTHTGEKPYRCEECSKQFSQLGDLKSHMRTHTGEKPYKCEECSKQFSQLGDLKKHI 561
Query: 196 K 196
+
Sbjct: 562 R 562
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 133 RTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLH 192
R+ K+ +RT + C C +G ++ HIRTHTGEKPY C +C+ + + + L
Sbjct: 443 RSLKTHMRTHTGEKPYQCEECSRQFSELGSLKKHIRTHTGEKPYRCEECSKQFSQLGHLK 502
Query: 193 YHLK 196
H++
Sbjct: 503 SHMR 506
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 44/104 (42%), Gaps = 15/104 (14%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C Q S L L S+M + C C S L +L KS
Sbjct: 488 CEECSKQFSQLGHLK-----SHMRTHTGEKPYR--CEECSKQFS-QLGDL-------KSH 532
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
+RT + C C +G ++ HIRTHTGEKPY C +C+
Sbjct: 533 MRTHTGEKPYKCEECSKQFSQLGDLKKHIRTHTGEKPYKCEECS 576
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T K +RT + C C+ +G +++H+RTHTGEKPY C +C+ R + + L
Sbjct: 108 TLKKHMRTHTGEKPYRCEECNKQFSRLGNLKTHMRTHTGEKPYKCVKCSKRFSQLVHLKG 167
Query: 194 HLK 196
H++
Sbjct: 168 HMQ 170
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C +G ++ H+RTHTGEKPY C +C+ + + ++ L+ H+
Sbjct: 250 KRHMRTHTGEKPYKCEECSRQFSELGHLKRHMRTHTGEKPYRCEECSKQFSDLSDLNKHI 309
Query: 196 K 196
+
Sbjct: 310 R 310
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C IG +++H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 26 KTHMRTHTGEKPYRCKDCSKQFSEIGHLKTHMRTHTGEKPYRCEECSGQFSRLYSLKTHM 85
Query: 196 K 196
+
Sbjct: 86 R 86
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ IRT + C C +G ++ H+RTHTGEKPY C +C+ + + L H+
Sbjct: 390 KTHIRTHTGETPYKCEECSRQFSRLGKLKRHVRTHTGEKPYKCEECSRQFTTKRSLKTHM 449
Query: 196 K 196
+
Sbjct: 450 R 450
Score = 42.4 bits (98), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C Q S L L +M + C C S +L++L +H
Sbjct: 264 CEECSRQFSELGHLK-----RHMRTHTGEKPYR--CEECSKQFS-DLSDLNKH------- 308
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IRT + C C G + H+RTHTGEKPY C +C+ + + + L H++
Sbjct: 309 IRTHTGERPYRCEECSKQFSQHGHLEEHMRTHTGEKPYKCEECSRQFSQQSHLKKHIR 366
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 151 YACDYFSYN---IGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
Y CD S + +++H+RTHTGEKPY C +C+ + + +GL H++
Sbjct: 656 YKCDACSRQFSLLANLKTHMRTHTGEKPYKCEECSKQFSQQSGLKIHMR 704
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C + +++H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 54 KTHMRTHTGEKPYRCEECSGQFSRLYSLKTHMRTHTGEKPYRCEECSRQFSELGTLKKHM 113
Query: 196 K 196
+
Sbjct: 114 R 114
Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C I +++H+RTHTGEKPY C C+ + + + L H++
Sbjct: 1 MRTHTGEKPYKCEECSKQFSRIWNLKTHMRTHTGEKPYRCKDCSKQFSEIGHLKTHMR 58
>gi|327277714|ref|XP_003223608.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 40-like [Anolis
carolinensis]
Length = 2684
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 28/54 (51%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K+VC C+ + HIR+HTGE+PY C C F + + L+ H K H
Sbjct: 398 KYVCEYCNRACAKPSVLLKHIRSHTGERPYPCETCGFSFKTKSNLYKHKKSHAH 451
Score = 45.1 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
R K++C C ++ HIRTHT +PY C C F + L H+K H
Sbjct: 2044 RGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCNYCNFSFKTKGNLTKHMKSKAH 2099
>gi|260795667|ref|XP_002592826.1| hypothetical protein BRAFLDRAFT_201637 [Branchiostoma floridae]
gi|229278050|gb|EEN48837.1| hypothetical protein BRAFLDRAFT_201637 [Branchiostoma floridae]
Length = 651
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
KS +RT ++C C +G ++ H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 156 KSHMRTHTGEAPYMCEECSKHFGELGSLKKHMRTHTGEKPYKCEECSKQFSRLGDLKRHM 215
Query: 196 K 196
+
Sbjct: 216 R 216
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 51/119 (42%), Gaps = 15/119 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLST-NLNELIEHCRTCKS 137
C+ C Q S LD L +M + C C S L L EH
Sbjct: 422 CEECSKQFSQLDSLK-----KHMRTHTGEKPYK--CEECSKQFSRLRLGHLKEH------ 468
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C +G +++HIRTHTGEKPY C +C+ + + + L H++
Sbjct: 469 -MRTHTGEKPYKCEECSKQFCLLGHLKTHIRTHTGEKPYKCVECSKQFSQLVHLKGHMR 526
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IRT + C C +G +++H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 16 KRHIRTHTGEKPYRCEECSRQFSELGHLKTHMRTHTGEKPYRCEECSRQFSVLCNLERHM 75
Query: 196 K 196
+
Sbjct: 76 R 76
Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C +G ++ H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 296 KAHMRTHTGEKPYKCEECSRQFCELGDLKKHMRTHTGEKPYKCEKCSKQFSVLGALKIHM 355
Query: 196 K 196
+
Sbjct: 356 R 356
Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+C C IG ++ HIRTHTGEKPY C +C+ + + + L H++
Sbjct: 1 MCETCSRQFSQIGDLKRHIRTHTGEKPYRCEECSRQFSELGHLKTHMR 48
Score = 43.1 bits (100), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C +G ++ H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 100 KKHMRTHTLEKPYKCEECSSQFSQLGNLKKHMRTHTGEKPYKCEECSRQFSRLDCLKSHM 159
Query: 196 K 196
+
Sbjct: 160 R 160
Score = 42.7 bits (99), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 56/139 (40%), Gaps = 29/139 (20%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYC----------KAVLSTNLNE 127
C+ C Q S LD L S+M + +P+ C C K + T+ E
Sbjct: 142 CEECSRQFSRLDCLK-----SHM---RTHTGEAPYMCEECSKHFGELGSLKKHMRTHTGE 193
Query: 128 LIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA 177
C C K +RT + C C G ++ H+RTHTGEKPY
Sbjct: 194 KPYKCEECSKQFSRLGDLKRHMRTHTGEKPYRCEECSKQFSQQGDLKKHMRTHTGEKPYK 253
Query: 178 CGQCAFRSASVAGLHYHLK 196
C +C+ + + + L H++
Sbjct: 254 CEECSKQFSVLGNLEKHVR 272
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C + ++ H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 522 KGHMRTHTGEKPYRCEECSRQFSQLESLKRHMRTHTGEKPYRCEECSKQFSKLGNLKTHM 581
Query: 196 K 196
+
Sbjct: 582 R 582
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
K +RT + C AC +G + H+RTHTGEKPY C +C
Sbjct: 606 KKHMRTHTGEKPYRCEACSKQFSELGNLEKHMRTHTGEKPYRCEEC 651
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
KS +RT + C C + ++ H+RTHTGEKPY C +C+
Sbjct: 408 KSHMRTHTGEKPYSCEECSKQFSQLDSLKKHMRTHTGEKPYKCEECS 454
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 10/92 (10%)
Query: 115 IYCKAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMR 164
++ K + T+ E C C K +RT + C C +G ++
Sbjct: 519 VHLKGHMRTHTGEKPYRCEECSRQFSQLESLKRHMRTHTGEKPYRCEECSKQFSKLGNLK 578
Query: 165 SHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+H+RTHT EKP+ CG+C + + + L H++
Sbjct: 579 THMRTHTREKPHRCGECNRQFSHLCNLKKHMR 610
Score = 39.7 bits (91), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Query: 118 KAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHI 167
KA + T+ E C C K +RT + C C +G ++ H+
Sbjct: 296 KAHMRTHTGEKPYKCEECSRQFCELGDLKKHMRTHTGEKPYKCEKCSKQFSVLGALKIHM 355
Query: 168 RTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RTHT EKPY C +C+ + + ++ + H++
Sbjct: 356 RTHTDEKPYRCEECSKQFSQLSNMKAHMR 384
>gi|293351051|ref|XP_002727665.1| PREDICTED: zinc finger protein 711 isoform 2 [Rattus norvegicus]
gi|293363108|ref|XP_002730311.1| PREDICTED: zinc finger protein 711 isoform 1 [Rattus norvegicus]
Length = 805
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKT 198
+ + F H VC C + ++ H+RTHTGEKPY C C FR A + L H+K
Sbjct: 542 VHSKSFPH--VCVECGKGFRHPSELKKHMRTHTGEKPYQCQYCVFRCADQSNLKTHIKSK 599
Query: 199 Y 199
+
Sbjct: 600 H 600
>gi|348563239|ref|XP_003467415.1| PREDICTED: zinc finger protein ZFAT-like [Cavia porcellus]
Length = 1290
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 319 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 368
Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 321 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 372
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K ++C C+F S L H+++ +
Sbjct: 373 K-FSCDYCSFTCLSKGHLKVHIERVH 397
Score = 36.6 bits (83), Expect = 5.9, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 929 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 977
Score = 36.6 bits (83), Expect = 6.0, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 958 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 1008
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 1009 DGKQFKCTVCDYTAAQKPQLLRHMEQHASFKPFRCAHCHYSCNISGSLKRHYNRKH 1064
>gi|260823034|ref|XP_002603988.1| hypothetical protein BRAFLDRAFT_71724 [Branchiostoma floridae]
gi|229289313|gb|EEN59999.1| hypothetical protein BRAFLDRAFT_71724 [Branchiostoma floridae]
Length = 261
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
C CDY + + H+ HTGEKPY CG+C +R+AS + L H++
Sbjct: 149 CDQCDYSAAQKFTLDQHMTKHTGEKPYMCGECGYRTASRSALSRHMR 195
Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C CDY + + + H H GEKPY CG+C +RS L H+
Sbjct: 91 YKCDQCDYSAAHKRSLEQHFAKHGGEKPYMCGECGYRSVQKCDLSRHM 138
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H H+GEKPY CG+C +R+A + L H+K
Sbjct: 194 MRTHTGEKPYRCDQCDYSAAEKHHLIVHQTRHSGEKPYMCGECGYRAAQRSTLSRHMK 251
Score = 43.5 bits (101), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSAS 187
++C C Y + + + H+RTHTGEKPY C QC + +A
Sbjct: 175 YMCGECGYRTASRSALSRHMRTHTGEKPYRCDQCDYSAAE 214
Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HTGEKPY C QC + +A L H K
Sbjct: 63 YMCGECGYRAAKKSHLTGHMRIHTGEKPYKCDQCDYSAAHKRSLEQHFAK 112
Score = 39.3 bits (90), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y S + H+ THTGEKP+ C QC + +A L H+ K
Sbjct: 119 YMCGECGYRSVQKCDLSRHMTTHTGEKPHKCDQCDYSAAQKFTLDQHMTK 168
>gi|395840116|ref|XP_003792911.1| PREDICTED: zinc finger protein ZFAT isoform 2 [Otolemur garnettii]
Length = 1155
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 260 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 309
Score = 38.9 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 262 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 313
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 314 K-FACDCCSFTCLSKGHLKVHVERVH 338
Score = 36.6 bits (83), Expect = 5.4, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 899 CTLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 949
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 950 DGKQFKCTVCDYTAAQKPQLLRHMEQHVSFKPFRCAHCPYSCNISGSLKRHYNRKH 1005
Score = 36.2 bits (82), Expect = 8.5, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 870 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCTLCEYATRSKSNLKAHMNR 918
>gi|260818451|ref|XP_002604396.1| hypothetical protein BRAFLDRAFT_58764 [Branchiostoma floridae]
gi|229289723|gb|EEN60407.1| hypothetical protein BRAFLDRAFT_58764 [Branchiostoma floridae]
Length = 1020
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C G ++ H+RTHTGEKPY CG+C+ R + + L H++
Sbjct: 905 FTCEECSRQFSERGSLKKHMRTHTGEKPYMCGECSKRFSVLGDLKTHMR 953
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 17/119 (14%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKS 137
C+ C Q LD L M + PF C C + L L H
Sbjct: 310 CEECSRQFGRLDCL--------MAHIRTHTGEKPFKCDKC-GMQFRKLGHLGTH------ 354
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT K+ C C +G ++SH+R+HTGEKPY C +C+ + + ++ L H++
Sbjct: 355 -MRTHTGEKKYRCEECSRQFSELGSLKSHMRSHTGEKPYTCEECSKQFSELSHLKTHMR 412
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 17/111 (15%)
Query: 95 CKTCSYMIRPNA--------NNTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFR 145
C+ CS R + PF C C S T K+ +RT
Sbjct: 58 CEECSKQFRQTGALKNHMKTHTGEKPFKCEECSKQFSERA--------TLKTHVRTHTGE 109
Query: 146 HKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C G ++SH+RTHTGEKPY C +C+ + + + L H++
Sbjct: 110 KPYKCKECSRQFSEPGSLKSHMRTHTGEKPYRCEECSKQFSQPSDLKKHMR 160
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C G ++ H++THTGEKPY CG+C+ R + +A L H+
Sbjct: 781 KKHMRTHTGEKPYKCEECSRQFSMPGSLKRHMQTHTGEKPYMCGECSKRFSVLADLKKHM 840
Query: 196 K 196
+
Sbjct: 841 R 841
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C Q S L L ++M + C C ST +N L EH
Sbjct: 394 CEECSKQFSELSHLK-----THMRTHTGEKPYR--CEECSRQFST-MNGLKEH------- 438
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C +G ++ H+RTHTGEKPY C +C+ + + L H++
Sbjct: 439 MRTHTGEKPYCCEECSKQFRCLGDLKKHMRTHTGEKPYKCEECSKQFRHLCSLKEHMR 496
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT F C C + C+ +HIRTHTGEKP+ C +C + + L H+
Sbjct: 296 KTHMRTHTGEKPFNCEECSRQFGRLDCLMAHIRTHTGEKPFKCDKCGMQFRKLGHLGTHM 355
Query: 196 K 196
+
Sbjct: 356 R 356
Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT ++C C +G +++H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 921 KKHMRTHTGEKPYMCGECSKRFSVLGDLKTHMRTHTGEKPYKCAECSKQFSQRSALKTHM 980
Score = 42.4 bits (98), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA--FRSASVAGLHYH 194
+RT F C C + C+ +H RTHTGEKP+ C +C FR G H H
Sbjct: 672 MRTHTGEKPFKCEECSKQFGRVDCLMAHKRTHTGEKPFQCERCGMRFRRLGHLGTHMH 729
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C + ++ H+RTHTGEKPY C +C+ + +S+ GL H++
Sbjct: 821 YMCGECSKRFSVLADLKKHMRTHTGEKPYKCEECSKQFSSLYGLKCHMR 869
Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C +++H+RTHTGEKPY C +C+ + + L H+
Sbjct: 613 KTHMRTHTGEKPYKCEECSKQFSRPEHLKTHMRTHTGEKPYKCEECSKQFSQPGSLKIHM 672
Query: 196 K 196
+
Sbjct: 673 R 673
Score = 39.7 bits (91), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
K+ C C + ++ H+RTHTGEKPY C +C+ R + L H++
Sbjct: 736 KYGCEECSRQFSALDQLKIHMRTHTGEKPYMCEECSKRFVAQGDLKKHMR 785
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C+ +G +++H+R H GEKP+ C +C+ + L H+K
Sbjct: 28 YKCEECNKKFSQLGNLKTHMRIHRGEKPFKCEECSKQFRQTGALKNHMK 76
Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
F+C C + ++ H+RTHTGEKPY C +C+
Sbjct: 541 FLCEECSRQFSQLSHLKIHMRTHTGEKPYKCEECS 575
Score = 36.2 bits (82), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C + ++ H+R HTGEKP+ C +C+ + + L HL+
Sbjct: 224 FKCEECSKQFSQLSDLKKHMRIHTGEKPFKCEECSKQFSRPGHLKIHLR 272
>gi|260835636|ref|XP_002612814.1| hypothetical protein BRAFLDRAFT_82171 [Branchiostoma floridae]
gi|229298194|gb|EEN68823.1| hypothetical protein BRAFLDRAFT_82171 [Branchiostoma floridae]
Length = 1172
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
R +VC C Y + H+RTHTGE+P+ C QC + +AS L HL
Sbjct: 1022 REPYVCGECGYRTPKKSHFSRHMRTHTGERPFKCDQCNYTAASKYSLDIHL 1072
Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + SH++THTG+KPY C QC + +A + L HL K
Sbjct: 1082 YMCGECGFRTTRKPLLSSHMKTHTGQKPYKCDQCDYCAARKSDLSTHLIK 1131
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHT-GEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C C+Y + + + H+ TH +KPY CG+C FR+ L H+K
Sbjct: 1044 MRTHTGERPFKCDQCNYTAASKYSLDIHLTTHDKSDKPYMCGECGFRTTRKPLLSSHMK 1102
>gi|149055494|gb|EDM07078.1| similar to ZNF6 protein (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 790
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKT 198
+ + F H VC C + ++ H+RTHTGEKPY C C FR A + L H+K
Sbjct: 527 VHSKSFPH--VCVECGKGFRHPSELKKHMRTHTGEKPYQCQYCVFRCADQSNLKTHIKSK 584
Query: 199 Y 199
+
Sbjct: 585 H 585
>gi|17737957|ref|NP_524349.1| suppressor of hairy wing, isoform A [Drosophila melanogaster]
gi|24646800|ref|NP_731897.1| suppressor of hairy wing, isoform B [Drosophila melanogaster]
gi|386765756|ref|NP_001247098.1| suppressor of hairy wing, isoform C [Drosophila melanogaster]
gi|33860216|sp|P08970.2|SUHW_DROME RecName: Full=Protein suppressor of hairy wing
gi|7299867|gb|AAF55043.1| suppressor of hairy wing, isoform B [Drosophila melanogaster]
gi|7299868|gb|AAF55044.1| suppressor of hairy wing, isoform A [Drosophila melanogaster]
gi|27819989|gb|AAO25030.1| LD15893p [Drosophila melanogaster]
gi|220943534|gb|ACL84310.1| su(Hw)-PA [synthetic construct]
gi|383292702|gb|AFH06416.1| suppressor of hairy wing, isoform C [Drosophila melanogaster]
Length = 941
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 16/126 (12%)
Query: 79 CKHCHSQLS---HLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRT- 134
CK C + HL +CS +N T + C C V L+ L H +
Sbjct: 350 CKICGKDFTRSYHLKRHQKYSSCS------SNETDTMSCKVCDRVF-YRLDNLRSHLKQH 402
Query: 135 CKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+ + P +++C+ C Y++ + HIRTHTGEKP+ C C + +++ L H
Sbjct: 403 LGTQVVKKP---EYMCHTCKNCFYSLSTLNIHIRTHTGEKPFDCDLCDKKFSALVALKKH 459
Query: 195 LKKTYH 200
+ YH
Sbjct: 460 --RRYH 463
>gi|260795611|ref|XP_002592798.1| hypothetical protein BRAFLDRAFT_149267 [Branchiostoma floridae]
gi|229278022|gb|EEN48809.1| hypothetical protein BRAFLDRAFT_149267 [Branchiostoma floridae]
Length = 219
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C +G +++H+RTHTGEKPY C +C+ R + + L H+
Sbjct: 157 KTHMRTHTGEKPYRCEECSRQFSQMGQLKTHMRTHTGEKPYRCEECSRRFSQLGQLKTHM 216
Query: 196 K 196
+
Sbjct: 217 R 217
Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C +G ++ H+RTHTGEKPY C +C+ + + ++ L H++
Sbjct: 76 MRTHTGEKPYKCEECSRQFSQLGELKRHMRTHTGEKPYKCEECSRQFSVLSHLKTHMR 133
Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IRT + C C+ + +++H+RTHTG+ PY C +C+ + + + L H+
Sbjct: 17 KEHIRTHTGEKPYRCEECNKQFNRLSHLKTHMRTHTGQTPYKCEECSKQFSQLCNLKVHM 76
Query: 196 K 196
+
Sbjct: 77 R 77
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C + ++ HIRTHTGEKPY C +C + ++ L H++
Sbjct: 1 YRCEECGKHFSQMSNLKEHIRTHTGEKPYRCEECNKQFNRLSHLKTHMR 49
>gi|195126088|ref|XP_002007506.1| GI12352 [Drosophila mojavensis]
gi|193919115|gb|EDW17982.1| GI12352 [Drosophila mojavensis]
Length = 796
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C C++ +TN ELI H R T HK C C Y S + +R H+ HTGE
Sbjct: 327 CKLCESAFTTN-GELIRHTR----YKHTKEKPHK--CTECSYASVELTKLRRHMTCHTGE 379
Query: 174 KPYACGQCAFRSASVAGLHYHL 195
+PY C C + S + L HL
Sbjct: 380 RPYQCPHCTYASQDMFKLKRHL 401
>gi|397519973|ref|XP_003830123.1| PREDICTED: zinc finger protein ZFAT isoform 2 [Pan paniscus]
Length = 1243
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 271 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 320
Score = 39.7 bits (91), Expect = 0.73, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 273 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 324
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 325 K-FACDYCSFTCLSKGHLKVHIERVH 349
Score = 36.6 bits (83), Expect = 6.0, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 882 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 930
Score = 36.6 bits (83), Expect = 6.0, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 911 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 961
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 962 DGKQFKCTVCDYTAAQKPQLLRHMEQHVSFKPFRCAHCHYSCNISGSLKRHYNRKH 1017
>gi|332254407|ref|XP_003276322.1| PREDICTED: zinc finger protein ZFAT isoform 2 [Nomascus leucogenys]
Length = 1243
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 271 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 320
Score = 39.7 bits (91), Expect = 0.73, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 273 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 324
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 325 K-FACDYCSFTCLSKGHLKVHIERVH 349
Score = 36.6 bits (83), Expect = 6.0, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 882 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 930
Score = 36.6 bits (83), Expect = 6.0, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 911 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 961
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 962 DGKQFKCTVCDYTAAQKPQLLRHMEQHVSFKPFRCAHCHYSCNISGSLKRHYNRKH 1017
>gi|260823072|ref|XP_002604007.1| hypothetical protein BRAFLDRAFT_57768 [Branchiostoma floridae]
gi|229289332|gb|EEN60018.1| hypothetical protein BRAFLDRAFT_57768 [Branchiostoma floridae]
Length = 251
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C HC + LD ++++ F C C +T + L H RT
Sbjct: 86 CDHCDYSAADKSALD-----KHLVKHTGEKPF--MCGEC-GFRTTQKSHLSRHMRT---H 134
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C CDY + + H R HTGEKPY C +C +R+A + L H+K
Sbjct: 135 TGEKPYR----CDQCDYSAAEKYTLDQHQRKHTGEKPYICDECGYRAADRSTLSRHMK 188
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C CDY + + + H HTGEKPY CG+C FR+A + L+ H+K
Sbjct: 196 YLCDQCDYSTAHKQYLIDHQSRHTGEKPYMCGECGFRAAQRSTLYRHMK 244
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H HTGEKP+ CG+C +R+A + L H++
Sbjct: 19 MRTHSGEKPYKCDQCDYSAARRSALEEHKAKHTGEKPFMCGECGYRAARKSHLSQHMR 76
Score = 43.1 bits (100), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + H+R+HTGEKPY C C + +A + L HL K
Sbjct: 56 FMCGECGYRAARKSHLSQHMRSHTGEKPYRCDHCDYSAADKSALDKHLVK 105
Score = 42.7 bits (99), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C + + + H+RTHTGEKPY C QC + +A L H +K
Sbjct: 112 FMCGECGFRTTQKSHLSRHMRTHTGEKPYRCDQCDYSAAEKYTLDQHQRK 161
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C Y + + H+RTH+GEKPY C QC + +A + L H K
Sbjct: 1 MCGECGYRTAYRSDLSRHMRTHSGEKPYKCDQCDYSAARRSALEEHKAK 49
Score = 39.7 bits (91), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
++C C Y + + + H++THTGE+PY C QC + +A
Sbjct: 168 YICDECGYRAADRSTLSRHMKTHTGERPYLCDQCDYSTA 206
>gi|260822721|ref|XP_002606750.1| hypothetical protein BRAFLDRAFT_59132 [Branchiostoma floridae]
gi|229292094|gb|EEN62760.1| hypothetical protein BRAFLDRAFT_59132 [Branchiostoma floridae]
Length = 431
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
KS IRT + C C +G ++ H+RTHTGEKPY C +C+ + + ++ L H+
Sbjct: 278 KSHIRTHTGERPYTCEECSRQFSELGDLKRHMRTHTGEKPYRCNECSRQFSRLSHLERHM 337
Query: 196 K 196
+
Sbjct: 338 R 338
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
KS +RT + C C +G ++SH+RTHTGEKPY C +C+ + + + L H+
Sbjct: 194 KSHMRTHTGEKPYKCEKCSRQFSQLGHLKSHMRTHTGEKPYRCEECSRQFSELGTLEKHM 253
Query: 196 K 196
+
Sbjct: 254 R 254
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 10/91 (10%)
Query: 116 YCKAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRS 165
Y K+ + T+ E C C KS +RT + C C +G +
Sbjct: 192 YLKSHMRTHTGEKPYKCEKCSRQFSQLGHLKSHMRTHTGEKPYRCEECSRQFSELGTLEK 251
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
H+RTHTGEKPY C +C+ + +++ L H++
Sbjct: 252 HMRTHTGEKPYRCEECSRQFSALDSLKSHIR 282
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 19/112 (16%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C++CS FS C + K + T+ E C C K +RT
Sbjct: 68 CESCS--------KQFSQLC-HLKTHMRTHTGEKPYRCEECSRQFSRPSHLKVHMRTHTG 118
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ + C AC G ++SH+RTHTGE+PY C +C + + + L H++
Sbjct: 119 ENPYRCEACSRQFSQPGHLKSHMRTHTGERPYRCEECGRQFSELGHLKRHMR 170
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
KS ++T ++C C + ++SH+RTHTGEKPY C +C+ + ++++ L H+
Sbjct: 362 KSHMQTHTGEKPYMCEECSKQFGQLSNLKSHMRTHTGEKPYTCEECSRQFSTLSNLKKHM 421
Query: 196 K 196
K
Sbjct: 422 K 422
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
KS +RT + C C +G ++ H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 138 KSHMRTHTGERPYRCEECGRQFSELGHLKRHMRTHTGEKPYRCEECSRQFSRLEYLKSHM 197
Query: 196 K 196
+
Sbjct: 198 R 198
Score = 43.5 bits (101), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
KS +RT + C C +G +++H+RTHTGEKPY C C+ + + + L H+
Sbjct: 26 KSHMRTHTGEKPYRCEECSKQFSGLGHLKTHMRTHTGEKPYTCESCSKQFSQLCHLKTHM 85
Query: 196 K 196
+
Sbjct: 86 R 86
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C C + ++SH+RTHTGEKPY C +C+ + + + L H++
Sbjct: 1 MRTHTGEKPFRCEECSRQFSELHHLKSHMRTHTGEKPYRCEECSKQFSGLGHLKTHMR 58
>gi|260785111|ref|XP_002587606.1| hypothetical protein BRAFLDRAFT_115656 [Branchiostoma floridae]
gi|229272756|gb|EEN43617.1| hypothetical protein BRAFLDRAFT_115656 [Branchiostoma floridae]
Length = 614
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACD 154
CK CS R + + S C C L+ L H IRT + C C
Sbjct: 224 CKECSRSFRTSRPHENSHRCEECSKQFG-RLSHLKIH-------IRTHTGERPYHCDECG 275
Query: 155 YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++G ++ H+RTHTGEKPY C +C+ + + + L H++
Sbjct: 276 QLFIHLGDLKGHVRTHTGEKPYRCQECSRQFSRLGQLKRHIR 317
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C +G ++ HIRTHTGEKPY C +C+ R + + L H+
Sbjct: 435 KKHMRTHTGEKPYKCEECGRQFSQLGDLKRHIRTHTGEKPYKCEECSKRFSQLDSLKRHM 494
Query: 196 K 196
+
Sbjct: 495 R 495
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT ++ C C +G + H+RTHTGEKPY C +C + + + L H+
Sbjct: 519 KTHMRTHTGEKRYRCDGCSKQFSELGSLEKHMRTHTGEKPYKCEECGRQFSQLGDLKRHI 578
Query: 196 K 196
+
Sbjct: 579 R 579
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 50/119 (42%), Gaps = 17/119 (14%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKS 137
C+ C Q S L L IR + P+ C +C S + N K+
Sbjct: 299 CQECSRQFSRLGQL------KRHIRTHTGE--KPYTCEHCNKGFSQSSN--------LKT 342
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C G ++ H RTHTGEKPY+CG+C + + L H++
Sbjct: 343 HMRTHTGEKPYKCETCSKQFNERGSLKKHTRTHTGEKPYSCGECCKKFRVLGQLKRHMQ 401
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C +G ++ H+RTHTGEKPY C +C + + + L H++
Sbjct: 419 FWCGNCGKQFSMLGNLKKHMRTHTGEKPYKCEECGRQFSQLGDLKRHIR 467
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
KS +RT + C C + ++ H+RTHTGEKPY C +C+ + + ++ L H+
Sbjct: 126 KSHMRTHTGEKPYKCEECSKQFSVLDGLKRHMRTHTGEKPYRCDECSKQFSEMSSLKRHM 185
Query: 196 K 196
+
Sbjct: 186 R 186
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+S PFR C C +G ++ H+RTHTGE+PY C +C + + + H+
Sbjct: 46 RSYTGEKPFR----CEECSKQFSQLGNLKRHMRTHTGERPYKCDKCYKQFSGQGSMKSHM 101
Query: 196 K 196
+
Sbjct: 102 R 102
Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
K IRT + C C + ++ H+RTHTGEKPY C +C+
Sbjct: 463 KRHIRTHTGEKPYKCEECSKRFSQLDSLKRHMRTHTGEKPYKCDECS 509
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
Query: 118 KAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHI 167
K+ + T+ E C C K +RT + C C + ++ H+
Sbjct: 126 KSHMRTHTGEKPYKCEECSKQFSVLDGLKRHMRTHTGEKPYRCDECSKQFSEMSSLKRHM 185
Query: 168 RTHTGEKPYACGQCAFRSASVAGLHYHL 195
RTHTGEKPY C +C + + + L H+
Sbjct: 186 RTHTGEKPYKCEECGRQFSRLCNLKSHV 213
Score = 35.8 bits (81), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSA 186
K +RT + C C + ++SH+ THTGEKPY C +C +FR++
Sbjct: 182 KRHMRTHTGEKPYKCEECGRQFSRLCNLKSHVMTHTGEKPYQCKECSRSFRTS 234
>gi|260782545|ref|XP_002586346.1| hypothetical protein BRAFLDRAFT_62630 [Branchiostoma floridae]
gi|229271450|gb|EEN42357.1| hypothetical protein BRAFLDRAFT_62630 [Branchiostoma floridae]
Length = 449
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + + C CDY + + H+ HTGEKPY CG+C R+A L H++
Sbjct: 108 MRTHTGKKPYTCSQCDYSATRKSSLDRHLAKHTGEKPYLCGECGHRTAQKCDLSKHMR 165
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTGEKPY CG+C +R+A L H+K
Sbjct: 334 YKCDQCDYCAAQKSTLDRHLTAHTGEKPYICGECGYRTAERRNLIRHMK 382
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 17/100 (17%)
Query: 114 CIYCKAVLSTNLNELIEH-------CRTC--KSMIRTDPFRH--------KFVCYACDYF 156
C YC A ST L H C C ++ R + RH + C CDY
Sbjct: 339 CDYCAAQKSTLDRHLTAHTGEKPYICGECGYRTAERRNLIRHMKIHSGEKPYRCDQCDYA 398
Query: 157 SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ + H+ HTG+KPY CG+C +R+A + L H++
Sbjct: 399 AVEKHSLDLHLAKHTGDKPYMCGECGYRTAYKSHLSQHMR 438
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTG+KPY C QC + + + L HL K
Sbjct: 89 YLCEDCGYKTSKKSHLLQHMRTHTGKKPYTCSQCDYSATRKSSLDRHLAK 138
Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C Y + + H+R HTG+KPY C QC + +A + L HL
Sbjct: 306 FMCGECGYRTTQKCDLSKHMRIHTGDKPYKCDQCDYCAAQKSTLDRHL 353
Score = 39.7 bits (91), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H+RTHTGEK Y C QC + +A + L HL K
Sbjct: 145 YLCGECGHRTAQKCDLSKHMRTHTGEKLYKCDQCGYSAAQKSTLGRHLAK 194
Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H HTG+KP+ CG+C +R+ L H++
Sbjct: 278 YKCDQCDYSAAMKHHLDIHRAKHTGDKPFMCGECGYRTTQKCDLSKHMR 326
Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
+ C CDY + + +H+ HTGEKPY CG+C
Sbjct: 201 YKCDQCDYSAAQKFNLNTHLLQHTGEKPYMCGECG 235
Score = 36.2 bits (82), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + C C Y + + H+ HT EKPY C QC + +A L+ HL
Sbjct: 164 MRTHTGEKLYKCDQCGYSAAQKSTLGRHLAKHTNEKPYKCDQCDYSAAQKFNLNTHL 220
Score = 36.2 bits (82), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
F C C + + + + H++ HTGEKPY C QC + +A
Sbjct: 250 FSCGECGFRTAHKYYLSKHMKIHTGEKPYKCDQCDYSAA 288
>gi|195055688|ref|XP_001994745.1| GH14387 [Drosophila grimshawi]
gi|193892508|gb|EDV91374.1| GH14387 [Drosophila grimshawi]
Length = 213
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+M+R+D F C C F + +HI+THTGEKPY C C VA L+ H+K
Sbjct: 122 NMLRSDNPDRPFGCSVCRRFFSQQSTLVNHIKTHTGEKPYKCKICDASFRQVATLNNHMK 181
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 11/97 (11%)
Query: 101 MIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYN 159
M+R ++N PF C C+ S + L+ H I+T + C CD
Sbjct: 123 MLR--SDNPDRPFGCSVCRRFFSQQ-STLVNH-------IKTHTGEKPYKCKICDASFRQ 172
Query: 160 IGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ + +H++ HTGEKPY C C + + L HL+
Sbjct: 173 VATLNNHMKIHTGEKPYNCSYCPKQFRQKSTLQNHLR 209
>gi|260814680|ref|XP_002602042.1| hypothetical protein BRAFLDRAFT_60702 [Branchiostoma floridae]
gi|229287347|gb|EEN58054.1| hypothetical protein BRAFLDRAFT_60702 [Branchiostoma floridae]
Length = 717
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 15/119 (12%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKS 137
+C+ C Q S +L H KT +M + C C+ S +L+ L H R S
Sbjct: 519 MCEECSRQFS---VLGHLKT--HMRTHTGEKPYK--CEECRRQFS-HLHSLRIHVR---S 567
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C C +G ++ H+RTHTGEKPY CG+C+ + + ++ L H++
Sbjct: 568 HTGEKPYR----CEECSMQFCQLGDLKKHMRTHTGEKPYKCGECSRQFSGLSNLKTHMR 622
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 58/142 (40%), Gaps = 18/142 (12%)
Query: 55 LDQILNLNLSVLLVTTIPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFC 114
Q+ NLN + T + C+ C Q S L L ++M + C
Sbjct: 250 FGQLGNLNAHMKTHTG---EKPYRCEKCSRQFSELGSLR-----THMRTHTGEKAYR--C 299
Query: 115 IYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK 174
C T N L EH +RT ++C C G ++ HIRTHTGEK
Sbjct: 300 EECSKQFVTQGN-LKEH-------MRTHTGEKPYMCEECSRQFRTSGHLKKHIRTHTGEK 351
Query: 175 PYACGQCAFRSASVAGLHYHLK 196
PY C +C+ + + + + H++
Sbjct: 352 PYGCKECSRQFSQLGHVKKHMR 373
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 136 KSMIRTDPFRHKFVCYAC-DYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
KS IRT + C C FS++ G +++H+R HTGEKPY C QC+++ + + L H
Sbjct: 89 KSHIRTHTGEKPYKCEQCSKQFSWS-GELKAHMRIHTGEKPYKCEQCSWQFSELGHLKTH 147
Query: 195 LK 196
++
Sbjct: 148 VR 149
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 62/155 (40%), Gaps = 22/155 (14%)
Query: 47 TAQLVLMSLDQILNLNLSVLLVTTIPTQNHSL---CKHCHSQLSHLDLLDHCKTCSYMIR 103
T + D + S LL T + T C+ C SQ S L L ++M
Sbjct: 180 TGEKPYKCEDCSRRFSRSSLLKTHMRTHTGERPYRCEECGSQFSQLSSLR-----THMRT 234
Query: 104 PNANNTFSPFCIYCKAVLST--NLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIG 161
+S C+ C NLN + K+ P+R C C +G
Sbjct: 235 HTGEKPYS--CVECSKQFGQLGNLNAHM------KTHTGEKPYR----CEKCSRQFSELG 282
Query: 162 CMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+R+H+RTHTGEK Y C +C+ + + L H++
Sbjct: 283 SLRTHMRTHTGEKAYRCEECSKQFVTQGNLKEHMR 317
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 56/139 (40%), Gaps = 29/139 (20%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYC----------KAVLSTNLNE 127
C+ C Q SHL L I ++ P+ C C K + T+ E
Sbjct: 548 CEECRRQFSHLHSL--------RIHVRSHTGEKPYRCEECSMQFCQLGDLKKHMRTHTGE 599
Query: 128 LIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA 177
C C K+ +RT + C C +G ++ HIRTHTGEKPY
Sbjct: 600 KPYKCGECSRQFSGLSNLKTHMRTHTGEKPYRCEECSKQFSQLGSLKKHIRTHTGEKPYK 659
Query: 178 CGQCAFRSASVAGLHYHLK 196
C +C+ + + + L H++
Sbjct: 660 CEECSKQFSRLDHLKTHMQ 678
Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C C + +G +++H+RTHTGEKPY C +C+ + + L H+
Sbjct: 129 YKCEQCSWQFSELGHLKTHVRTHTGEKPYGCEECSRQFTTRGHLKTHM 176
Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IRT + C C +G ++ H+RTHTGEKPY C +C+ R S G HL
Sbjct: 341 KKHIRTHTGEKPYGCKECSRQFSQLGHVKKHMRTHTGEKPYKCEECS-REFSEQG---HL 396
Query: 196 KK 197
K+
Sbjct: 397 KR 398
Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IRT + C C ++SHIRTHTGEKPY C QC+ + + L H++
Sbjct: 64 IRTHTGEKPYKCEECSRQFTTKSSLKSHIRTHTGEKPYKCEQCSKQFSWSGELKAHMR 121
Score = 43.5 bits (101), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C +G +++H+RTHTGEKPY C C+ R + L H++
Sbjct: 17 FQCEKCSKQFSKLGHLKAHVRTHTGEKPYKCEDCSRRFSQPGHLTTHIR 65
Score = 42.7 bits (99), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C G + +HIRTHTGEKPY C +C+ + + + L H+
Sbjct: 33 KAHVRTHTGEKPYKCEDCSRRFSQPGHLTTHIRTHTGEKPYKCEECSRQFTTKSSLKSHI 92
Query: 196 K 196
+
Sbjct: 93 R 93
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IRT + C C + +++H++THTGEKPY C +C+ + + + L H+
Sbjct: 646 KKHIRTHTGEKPYKCEECSKQFSRLDHLKTHMQTHTGEKPYKCEECSRQFSQLGHLKKHM 705
Query: 196 K 196
+
Sbjct: 706 R 706
Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C + ++ HIRTHTGEKPY C +C+ + + L H+K
Sbjct: 409 YKCEECSKQFSRLDGLKEHIRTHTGEKPYRCEECSRQFRTSGHLMRHMK 457
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 45/112 (40%), Gaps = 19/112 (16%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
C+ CS R + + K + T+ E C+ C K +RT
Sbjct: 327 CEECSRQFRTSG---------HLKKHIRTHTGEKPYGCKECSRQFSQLGHVKKHMRTHTG 377
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C G ++ H +TH G KPY C +C+ + + + GL H++
Sbjct: 378 EKPYKCEECSREFSEQGHLKRHKQTHGGVKPYKCEECSKQFSRLDGLKEHIR 429
>gi|60729644|pir||JC7992 negatively regulating zinc finger protein, NZFP - African clawed
frog
Length = 613
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA--FRSASVAGLHYHLK 196
F C C+ + C+R H RTHTGEKPY+C +C FR AGL H +
Sbjct: 546 FPCTECEKSFSDRACLRGHKRTHTGEKPYSCSECGKCFRDG--AGLRVHKR 594
Score = 39.7 bits (91), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 26/57 (45%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RT F C C N C+R H R HTGEKP+ C +C + A L H +
Sbjct: 510 RTHTGEKPFSCSECGKCFINQACLRVHKRIHTGEKPFPCTECEKSFSDRACLRGHKR 566
Score = 36.6 bits (83), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C+ + + + H++ H GEKP+ C QC R V+ L+ H +
Sbjct: 378 YACSQCEKYFPHRSNLNRHLKLHKGEKPFPCSQCGKRFPCVSDLNIHRR 426
>gi|355755486|gb|EHH59233.1| Zinc finger protein 433, partial [Macaca fascicularis]
Length = 672
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 45/117 (38%), Gaps = 17/117 (14%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKS 137
CK C L L L Y+I + P+ C C S H + +
Sbjct: 200 CKFCGKALMFLSL--------YLIHKRTHTGEKPYECKQCGKAFS--------HSGSLRI 243
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
RT + C C ++ C+ +H RTHTGEKPY C QC S + YH
Sbjct: 244 HERTHTGEKPYECNECGKAFHSSTCLHAHKRTHTGEKPYECNQCGKAFNSSSSFRYH 300
Score = 44.7 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLH 192
RT R + C C R H RTHTGEKPY C QC AFRSAS+ H
Sbjct: 386 RTHTGRKTYECKQCGRSFNCSSSFRYHGRTHTGEKPYECKQCGKAFRSASLLQTH 440
Score = 44.7 bits (104), Expect = 0.021, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLH 192
RT R + C C R H RTHTGEKPY C QC AFRSAS +H
Sbjct: 498 RTHTGRKTYECKQCGRSFNCSSSFRYHGRTHTGEKPYECKQCGKAFRSASQLQIH 552
Score = 40.8 bits (94), Expect = 0.35, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Query: 151 YACDYFSYNIGC---MRSHIRTHTGEKPYACGQCA--FRSASVAGLH 192
Y C GC +R H RTHTGEKPY C QC FR +S +H
Sbjct: 618 YKCKQCGKAFGCPSNLRRHGRTHTGEKPYKCKQCGKVFRCSSQLQVH 664
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLH 192
RT + C C + ++ H RTHTGEKPY C QC AF SAS +H
Sbjct: 526 RTHTGEKPYECKQCGKAFRSASQLQIHGRTHTGEKPYECKQCGKAFGSASHLQMH 580
Score = 38.1 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
RT + C C + +++H RTHTGEKPYAC +C
Sbjct: 302 RTHTGEKPYECKQCGKAFRSASLLQTHGRTHTGEKPYACKECG 344
Score = 38.1 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
RT + C C + +++H RTHTGEKPYAC +C
Sbjct: 414 RTHTGEKPYECKQCGKAFRSASLLQTHGRTHTGEKPYACKECG 456
Score = 37.4 bits (85), Expect = 3.4, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Query: 151 YACDYFSYNIGC---MRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
Y C + GC ++ H RTHTGEKPY C QC + L H
Sbjct: 590 YECKQCGKSFGCASRLQMHGRTHTGEKPYKCKQCGKAFGCPSNLRRH 636
Score = 36.2 bits (82), Expect = 7.5, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 24/55 (43%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
RT + C C + ++ H RTHTGEKPY C QC + L H
Sbjct: 554 RTHTGEKPYECKQCGKAFGSASHLQMHGRTHTGEKPYECKQCGKSFGCASRLQMH 608
>gi|260813394|ref|XP_002601403.1| hypothetical protein BRAFLDRAFT_61875 [Branchiostoma floridae]
gi|229286698|gb|EEN57415.1| hypothetical protein BRAFLDRAFT_61875 [Branchiostoma floridae]
Length = 370
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+RTHTGEKPY C +C +R+A + L H+K
Sbjct: 67 YMCGECGYKTAQKSTLTRHMRTHTGEKPYMCDECGYRTAQKSHLSEHMK 115
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
S ++T ++C C Y + N + H++THTG KPY CG+C +R+A A L H++
Sbjct: 223 SHMKTHTGEKPYMCGECGYRAANKSHISQHMKTHTGVKPYMCGECGYRTARKAVLSRHVR 282
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A L H+ K
Sbjct: 262 YMCGECGYRTARKAVLSRHVRTHTGEKPYKCDQCDYSAAQKTALELHMAK 311
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT ++C C Y + + H++THTGEKPY C QC + +A L HL K
Sbjct: 86 MRTHTGEKPYMCDECGYRTAQKSHLSEHMKTHTGEKPYKCDQCDYSAAHKISLDQHLAK 144
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+R HTGEKPY CG+C +++A + L H++
Sbjct: 29 MRTHTGEKPYKCDQCDYSAAYKTALDKHLRAKHTGEKPYMCGECGYKTAQKSTLTRHMR 87
Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A L H+ K
Sbjct: 151 YLCEHCGYKTTKHSHLSRHLRTHTGEKPYKCDQCNYSAAQKTALELHMAK 200
Score = 43.1 bits (100), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
+RT + C CDY + + H+ HTGEKPY CG C +R+A
Sbjct: 281 VRTHTGEKPYKCDQCDYSAAQKTALELHMAKHTGEKPYMCGICGYRAA 328
Score = 43.1 bits (100), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C Y + + H+RTHTGEKPY C QC + +A L HL+
Sbjct: 1 MRTHTGEKPYRCGECRYRTAKRSNLLVHMRTHTGEKPYKCDQCDYSAAYKTALDKHLR 58
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL--HYHLK 196
++C C Y + + H+RTHTGEKPY C QC + +A L HY K
Sbjct: 318 YMCGICGYRAAIKSHLIQHMRTHTGEKPYKCDQCEYSAAQKPSLDRHYQAK 368
>gi|195111012|ref|XP_002000073.1| GI24888 [Drosophila mojavensis]
gi|193916667|gb|EDW15534.1| GI24888 [Drosophila mojavensis]
Length = 214
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+M+R+D F C C F + +HI+THTGEKPY C C VA L+ H+K
Sbjct: 123 NMLRSDNPDRPFGCSVCRRFFSQQSTLVNHIKTHTGEKPYKCKICDASFRQVATLNNHMK 182
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 13/100 (13%)
Query: 101 MIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYN 159
M+R ++N PF C C+ S + L+ H I+T + C CD
Sbjct: 124 MLR--SDNPDRPFGCSVCRRFFSQQ-STLVNH-------IKTHTGEKPYKCKICDASFRQ 173
Query: 160 IGCMRSHIRTHTGEKPYACGQCA--FRSASVAGLHYHLKK 197
+ + +H++ HTGEKPY C C FR S H + K
Sbjct: 174 VATLNNHMKIHTGEKPYNCSYCPKQFRQKSTLQNHIRIHK 213
>gi|148227429|ref|NP_001090172.1| zinc finger protein 182 [Xenopus laevis]
gi|32395651|gb|AAP41528.1| negatively regulating zinc finger protein [Xenopus laevis]
Length = 613
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA--FRSASVAGLHYHLK 196
F C C+ + C+R H RTHTGEKPY+C +C FR AGL H +
Sbjct: 546 FPCTECEKSFSDRACLRGHKRTHTGEKPYSCSECGKCFRDG--AGLRVHKR 594
Score = 39.7 bits (91), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 26/57 (45%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RT F C C N C+R H R HTGEKP+ C +C + A L H +
Sbjct: 510 RTHTGEKPFSCSECGKCFINQACLRVHKRIHTGEKPFPCTECEKSFSDRACLRGHKR 566
Score = 36.6 bits (83), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C+ + + + H++ H GEKP+ C QC R V+ L+ H +
Sbjct: 378 YACSQCEKYFPHRSNLNRHLKLHKGEKPFPCSQCGKRFPCVSDLNIHRR 426
>gi|7959231|dbj|BAA96009.1| KIAA1485 protein [Homo sapiens]
Length = 1104
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 132 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 181
Score = 39.7 bits (91), Expect = 0.73, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 134 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 185
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 186 K-FACDYCSFTCLSKGHLKVHIERVH 210
Score = 36.6 bits (83), Expect = 6.1, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 772 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 822
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 823 DGKQFKCTVCDYTAAQKPQLLRHMEQHVSFKPFRCAHCHYSCNISGSLKRHYNRKH 878
Score = 36.6 bits (83), Expect = 6.2, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 743 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 791
>gi|397519971|ref|XP_003830122.1| PREDICTED: zinc finger protein ZFAT isoform 1 [Pan paniscus]
gi|397519975|ref|XP_003830124.1| PREDICTED: zinc finger protein ZFAT isoform 3 [Pan paniscus]
gi|397519979|ref|XP_003830126.1| PREDICTED: zinc finger protein ZFAT isoform 5 [Pan paniscus]
Length = 1231
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 259 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 308
Score = 39.7 bits (91), Expect = 0.74, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 261 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 312
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 313 K-FACDYCSFTCLSKGHLKVHIERVH 337
Score = 36.6 bits (83), Expect = 6.1, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 899 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 949
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 950 DGKQFKCTVCDYTAAQKPQLLRHMEQHVSFKPFRCAHCHYSCNISGSLKRHYNRKH 1005
Score = 36.6 bits (83), Expect = 6.2, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 870 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 918
>gi|332254405|ref|XP_003276321.1| PREDICTED: zinc finger protein ZFAT isoform 1 [Nomascus leucogenys]
gi|332254409|ref|XP_003276323.1| PREDICTED: zinc finger protein ZFAT isoform 3 [Nomascus leucogenys]
gi|332254411|ref|XP_003276324.1| PREDICTED: zinc finger protein ZFAT isoform 4 [Nomascus leucogenys]
Length = 1231
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 259 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 308
Score = 39.7 bits (91), Expect = 0.74, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 261 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 312
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 313 K-FACDYCSFTCLSKGHLKVHIERVH 337
Score = 36.6 bits (83), Expect = 6.1, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 899 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 949
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 950 DGKQFKCTVCDYTAAQKPQLLRHMEQHVSFKPFRCAHCHYSCNISGSLKRHYNRKH 1005
Score = 36.6 bits (83), Expect = 6.2, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 870 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 918
>gi|260791400|ref|XP_002590717.1| hypothetical protein BRAFLDRAFT_89523 [Branchiostoma floridae]
gi|229275913|gb|EEN46728.1| hypothetical protein BRAFLDRAFT_89523 [Branchiostoma floridae]
Length = 396
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C CDY + + ++ H+ THTGEKPY C C + +A V+ L YH+
Sbjct: 313 YKCEVCDYSAAHKSNLKRHMATHTGEKPYKCDVCDYSAAQVSHLRYHM 360
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C CDY + + +R H+ THTG++PY CG C F +A + L H+
Sbjct: 341 YKCDVCDYSAAQVSHLRYHMATHTGDRPYECGVCDFSAARMFTLKRHM 388
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C CDY + ++ ++ H+ THTGEKPY C C + +A ++ L H+
Sbjct: 229 YKCEMCDYSAAHVSILKRHMATHTGEKPYKCEVCDYSTARMSYLKRHM 276
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+ C CDY + ++ ++ H+ THTGEKPY C C + +A+ + L H
Sbjct: 132 YNCELCDYSTAHMSSLKVHMVTHTGEKPYKCEMCDYSAANSSNLKVH 178
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +R+ + C CD+ S + +R H+ THT EKPY C C + +A ++ L H+
Sbjct: 92 KVHMRSHTSEKPYSCEMCDFSSAHKNSLRKHMATHTSEKPYNCELCDYSTAHMSSLKVHM 151
Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 160 IGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+G ++ HIRT HTGE+PY CG C + +A+ L +H++ T+
Sbjct: 1 MGHLKLHIRTKHTGERPYICGHCGYSTANKQHLVHHVRATH 41
>gi|432104483|gb|ELK31101.1| Zinc finger protein 642 [Myotis davidii]
Length = 744
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C C+ S N++ LI+H +RT F C C I + HIR HTGE
Sbjct: 575 CDKCQKAFSQNIS-LIQH-------LRTHSGEKPFTCNECGKTFRQIRHLSEHIRIHTGE 626
Query: 174 KPYACGQCAFRSASVAGLHYH 194
KPYAC C + A L +H
Sbjct: 627 KPYACTACCKTFSHRAYLTHH 647
Score = 42.0 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 140 RTDPFRHKFVCYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RT +VC C FS NI ++ H+RTH+GEKP+ C +C + L H++
Sbjct: 565 RTHTGEKPYVCDKCQKAFSQNISLIQ-HLRTHSGEKPFTCNECGKTFRQIRHLSEHIR 621
Score = 38.1 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 10/82 (12%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C C+ + ++ L EH R PFR C C + +H R HTGE
Sbjct: 491 CNICEKIFKQTIH-LTEHMRIHTG---EKPFR----CKECGRAFSQSASLNTHQRIHTGE 542
Query: 174 KPYACGQCA--FRSASVAGLHY 193
KP+ C +C FR S H+
Sbjct: 543 KPFECEECGKTFRHRSSLNQHH 564
Score = 37.0 bits (84), Expect = 4.0, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 23/49 (46%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C + + H RTHTGEKPY C +C + L HL+
Sbjct: 545 FECEECGKTFRHRSSLNQHHRTHTGEKPYVCDKCQKAFSQNISLIQHLR 593
Score = 37.0 bits (84), Expect = 4.5, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
S IRT + C C+ + H+R HTGEKP+ C +C + A L+ H
Sbjct: 482 SYIRTKTYE----CNICEKIFKQTIHLTEHMRIHTGEKPFRCKECGRAFSQSASLNTH 535
>gi|46487911|ref|NP_065914.2| zinc finger protein ZFAT isoform 1 [Homo sapiens]
gi|85681862|sp|Q9P243.2|ZFAT_HUMAN RecName: Full=Zinc finger protein ZFAT; AltName: Full=Zinc finger
gene in AITD susceptibility region; AltName: Full=Zinc
finger protein 406
gi|75516788|gb|AAI01767.1| Zinc finger and AT hook domain containing [Homo sapiens]
gi|75516790|gb|AAI01769.1| Zinc finger and AT hook domain containing [Homo sapiens]
Length = 1243
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 271 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 320
Score = 39.7 bits (91), Expect = 0.75, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 273 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 324
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 325 K-FACDYCSFTCLSKGHLKVHIERVH 349
Score = 36.6 bits (83), Expect = 6.0, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 911 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 961
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 962 DGKQFKCTVCDYTAAQKPQLLRHMEQHVSFKPFRCAHCHYSCNISGSLKRHYNRKH 1017
Score = 36.6 bits (83), Expect = 6.2, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 882 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 930
>gi|410296910|gb|JAA27055.1| zinc finger and AT hook domain containing [Pan troglodytes]
Length = 1243
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 271 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 320
Score = 39.7 bits (91), Expect = 0.75, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 273 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 324
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 325 K-FACDYCSFTCLSKGHLKVHIERVH 349
Score = 36.6 bits (83), Expect = 6.2, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 911 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 961
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 962 DGKQFKCTVCDYTAAQKPQLLRHMEQHVSFKPFRCAHCHYSCNISGSLKRHYNRKH 1017
Score = 36.6 bits (83), Expect = 6.2, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 882 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 930
>gi|410218770|gb|JAA06604.1| zinc finger and AT hook domain containing [Pan troglodytes]
gi|410353353|gb|JAA43280.1| zinc finger and AT hook domain containing [Pan troglodytes]
Length = 1243
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 271 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 320
Score = 39.7 bits (91), Expect = 0.75, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 273 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 324
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 325 K-FACDYCSFTCLSKGHLKVHIERVH 349
Score = 36.6 bits (83), Expect = 6.0, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 911 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 961
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 962 DGKQFKCTVCDYTAAQKPQLLRHMEQHVSFKPFRCAHCHYSCNISGSLKRHYNRKH 1017
Score = 36.6 bits (83), Expect = 6.2, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 882 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 930
>gi|390334363|ref|XP_795546.3| PREDICTED: zinc finger protein 84-like [Strongylocentrotus
purpuratus]
Length = 793
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 9/114 (7%)
Query: 90 DLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC-------KSMIRTD 142
DL+ T +Y++ + C A S N E + C+ C KS ++
Sbjct: 273 DLVSQEDTGTYVLEGTSCQRSQNHC--AAATASLNEEEQLSQCKICLKSFMHLKSHMKVH 330
Query: 143 PFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CD + +H+R+HTGEKP+ C C + L YHL+
Sbjct: 331 TSERPFKCSVCDKGFIERRHLENHMRSHTGEKPFECSVCQKAFSRATHLTYHLR 384
Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 26/52 (50%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R F C CD + +H+R+HTGEKP+ C C + L YHL+
Sbjct: 591 RRPFKCSVCDKGFIERRHLENHMRSHTGEKPFECSVCQKAFSRATHLTYHLR 642
Score = 38.1 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 9/86 (10%)
Query: 112 PF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
PF C C+ S L H RT + F C C G M H+R H
Sbjct: 621 PFECSVCQKAFS-RATHLTYHLRTHTGI-------RPFSCETCGRSFGRKGDMTVHMRIH 672
Query: 171 TGEKPYACGQCAFRSASVAGLHYHLK 196
TGE+P+AC C ++ + L H++
Sbjct: 673 TGERPFACKLCDKTCSTQSNLTLHMR 698
Score = 37.4 bits (85), Expect = 3.6, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 50/131 (38%), Gaps = 28/131 (21%)
Query: 77 SLCKHCHSQLSHLD--LLDH-------CKTCSYMIRPNANNTF--------SPF-CIYCK 118
S+C+ S+ +HL L H C+TC + T PF C C
Sbjct: 625 SVCQKAFSRATHLTYHLRTHTGIRPFSCETCGRSFGRKGDMTVHMRIHTGERPFACKLCD 684
Query: 119 AVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAC 178
ST N + +R + C AC + + H+R HTGEKPY C
Sbjct: 685 KTCSTQSNLTLH--------MRGHTGERPYSCTACPKTFKSKSDLIKHVRMHTGEKPYQC 736
Query: 179 GQC--AFRSAS 187
C FR++S
Sbjct: 737 SVCHKEFRASS 747
Score = 37.0 bits (84), Expect = 5.0, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CD + H+R HTGE+PY+C C S + L H++
Sbjct: 678 FACKLCDKTCSTQSNLTLHMRGHTGERPYSCTACPKTFKSKSDLIKHVR 726
Score = 36.2 bits (82), Expect = 7.1, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 55/143 (38%), Gaps = 28/143 (19%)
Query: 73 TQNHSLCKHCHSQLSHLDLLDHCKTC--SYM---IRPNANNTFSPF-CIYC--------- 117
+QNH C + L+ + L CK C S+M + + PF C C
Sbjct: 293 SQNH--CAAATASLNEEEQLSQCKICLKSFMHLKSHMKVHTSERPFKCSVCDKGFIERRH 350
Query: 118 -KAVLSTNLNELIEHCRTCKSM----------IRTDPFRHKFVCYACDYFSYNIGCMRSH 166
+ + ++ E C C+ +RT F C C G M H
Sbjct: 351 LENHMRSHTGEKPFECSVCQKAFSRATHLTYHLRTHTGIRPFSCETCGRSFGRKGDMTVH 410
Query: 167 IRTHTGEKPYACGQCAFRSASVA 189
+R HTGE+P+AC Q + S +A
Sbjct: 411 MRIHTGERPFACLQTSSASIGLA 433
>gi|383408709|gb|AFH27568.1| zinc finger protein ZFAT isoform 1 [Macaca mulatta]
Length = 1243
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 271 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 320
Score = 39.7 bits (91), Expect = 0.75, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 273 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 324
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 325 K-FACDYCSFTCLSKGHLKVHIERVH 349
Score = 36.6 bits (83), Expect = 6.0, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 911 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 961
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 962 DGKQFKCTVCDYTAAQKPQLLRHMEQHVSFKPFRCAHCHYSCNISGSLKRHYNRKH 1017
Score = 36.6 bits (83), Expect = 6.2, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 882 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 930
>gi|332243333|ref|XP_003270833.1| PREDICTED: zinc finger protein 513 [Nomascus leucogenys]
Length = 632
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
R + C C + S+ ++ H++TH+GEKP+ CG+C + SA + L H
Sbjct: 147 RLLYSCRLCTFVSHYSSHLKRHMQTHSGEKPFRCGRCPYASAQLVNLTRH 196
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 7/69 (10%)
Query: 126 NELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
N L H +T PFR C C Y S ++ ++ H R HTGEKPY C C +
Sbjct: 464 NHLARHMKTHSG---EKPFR----CARCPYASAHLDNLKRHQRVHTGEKPYKCPLCPYAC 516
Query: 186 ASVAGLHYH 194
++A L H
Sbjct: 517 GNLANLKRH 525
Score = 43.9 bits (102), Expect = 0.035, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
F C C + ++ + H++TH+GEKP+ C +C + SA + L H
Sbjct: 451 FACSLCPFATHYPNHLARHMKTHSGEKPFRCARCPYASAHLDNLKRH 497
Score = 43.1 bits (100), Expect = 0.069, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 43/118 (36%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C C +HLD L + +P P C Y NL L H R
Sbjct: 481 CARCPYASAHLDNLKRHQRVHTGEKPYK----CPLCPYA----CGNLANLKRHGRIHSG- 531
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
PFR C C+Y ++ H+ HTGEKP+ C CA+ + H K
Sbjct: 532 --DKPFR----CSLCNYSCNQSMNLKRHMLRHTGEKPFRCATCAYTTGHWDNYKRHQK 583
>gi|262399392|ref|NP_001161055.1| zinc finger protein ZFAT isoform 2 [Homo sapiens]
gi|292658775|ref|NP_001025110.2| zinc finger protein ZFAT isoform 2 [Homo sapiens]
Length = 1231
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 259 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 308
Score = 39.7 bits (91), Expect = 0.75, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 261 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 312
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 313 K-FACDYCSFTCLSKGHLKVHIERVH 337
Score = 36.6 bits (83), Expect = 6.0, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 899 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 949
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 950 DGKQFKCTVCDYTAAQKPQLLRHMEQHVSFKPFRCAHCHYSCNISGSLKRHYNRKH 1005
Score = 36.6 bits (83), Expect = 6.2, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 870 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 918
>gi|221043160|dbj|BAH13257.1| unnamed protein product [Homo sapiens]
Length = 1231
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 259 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 308
Score = 39.7 bits (91), Expect = 0.75, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 261 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 312
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 313 K-FACDYCSFTCLSKGHLKVHIERVH 337
Score = 36.6 bits (83), Expect = 5.5, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 46/117 (39%), Gaps = 24/117 (20%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 899 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 949
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+F C CDY + + H+ H KP+ C C + S +++G LK+ Y+
Sbjct: 950 DGKQFKCTVCDYTAAQKPQLLRHMEQHVSFKPFRCAHCHY-SCNISG---SLKRLYN 1002
Score = 36.6 bits (83), Expect = 6.2, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 870 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 918
>gi|221043086|dbj|BAH13220.1| unnamed protein product [Homo sapiens]
Length = 1130
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 259 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 308
Score = 39.7 bits (91), Expect = 0.75, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 261 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 312
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 313 K-FACDYCSFTCLSKGHLKVHIERVH 337
Score = 36.6 bits (83), Expect = 6.0, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 798 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 848
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 849 DGKQFKCTVCDYTAAQKPQLLRHMEQHVSFKPFRCAHCHYSCNISGSLKRHYNRKH 904
Score = 36.6 bits (83), Expect = 6.2, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 769 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 817
>gi|208965716|dbj|BAG72872.1| zinc finger and AT hook domain containing protein [synthetic
construct]
Length = 1243
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 271 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 320
Score = 39.7 bits (91), Expect = 0.75, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 273 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 324
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 325 K-FACDYCSFTCLSKGHLKVHIERVH 349
Score = 36.6 bits (83), Expect = 6.0, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 911 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 961
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 962 DGKQFKCTVCDYTAAQKPQLLRHMEQHVSFKPFRCAHCHYSCNISGSLKRHYNRKH 1017
Score = 36.6 bits (83), Expect = 6.2, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 882 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 930
>gi|33877892|gb|AAH12989.1| ZFAT protein [Homo sapiens]
Length = 1190
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 304 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 353
Score = 39.7 bits (91), Expect = 0.75, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 306 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 357
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 358 K-FACDYCSFTCLSKGHLKVHIERVH 382
Score = 36.6 bits (83), Expect = 6.0, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 944 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 994
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 995 DGKQFKCTVCDYTAAQKPQLLRHMEQHVSFKPFRCAHCHYSCNISGSLKRHYNRKH 1050
Score = 36.6 bits (83), Expect = 6.2, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 915 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 963
>gi|33878189|gb|AAH25423.1| ZFAT protein [Homo sapiens]
Length = 1169
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 197 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 246
Score = 39.7 bits (91), Expect = 0.75, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 199 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 250
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 251 K-FACDYCSFTCLSKGHLKVHIERVH 275
Score = 36.6 bits (83), Expect = 6.1, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 837 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 887
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 888 DGKQFKCTVCDYTAAQKPQLLRHMEQHVSFKPFRCAHCHYSCNISGSLKRHYNRKH 943
Score = 36.6 bits (83), Expect = 6.2, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 808 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 856
>gi|45504122|dbj|BAD12567.1| ZFAT-1 [Homo sapiens]
Length = 1243
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 271 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 320
Score = 39.7 bits (91), Expect = 0.76, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 273 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 324
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 325 K-FACDYCSFTCLSKGHLKVHIERVH 349
Score = 36.6 bits (83), Expect = 6.1, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 911 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 961
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 962 DGKQFKCTVCDYTAAQKPQLLRHMEQHVSFKPFRCAHCHYSCNISGSLKRHYNRKH 1017
Score = 36.6 bits (83), Expect = 6.3, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 882 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 930
>gi|45504124|dbj|BAD12568.1| ZFAT-2 [Homo sapiens]
gi|45504126|dbj|BAD12569.1| ZFAT-3 [Homo sapiens]
Length = 1231
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 259 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 308
Score = 39.7 bits (91), Expect = 0.75, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 261 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 312
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 313 K-FACDYCSFTCLSKGHLKVHIERVH 337
Score = 36.6 bits (83), Expect = 6.1, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 899 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 949
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 950 DGKQFKCTVCDYTAAQKPQLLRHMEQHVSFKPFRCAHCHYSCNISGSLKRHYNRKH 1005
Score = 36.6 bits (83), Expect = 6.3, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 870 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 918
>gi|326665718|ref|XP_002661124.2| PREDICTED: zinc finger protein 658-like [Danio rerio]
Length = 292
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 111 SPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRT 169
P+ C YC S + N L +H +R ++C CD ++G +R H+R
Sbjct: 191 KPYTCSYCDKRFSDSGN-LRQH-------MRVHTGEKPYICSHCDKRFSDVGNLRQHVRI 242
Query: 170 HTGEKPYACGQCAFRSASVAGLHYHLK 196
HTGEKPY C C + GL H +
Sbjct: 243 HTGEKPYKCSHCDRTFRQLGGLKIHER 269
Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C+ + M++H R HTGEKPY C C R + L H++
Sbjct: 165 YICSLCNKRFSQLAHMKTHERIHTGEKPYTCSYCDKRFSDSGNLRQHMR 213
>gi|397519977|ref|XP_003830125.1| PREDICTED: zinc finger protein ZFAT isoform 4 [Pan paniscus]
Length = 1181
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 209 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 258
Score = 39.7 bits (91), Expect = 0.78, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 211 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 262
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 263 K-FACDYCSFTCLSKGHLKVHIERVH 287
Score = 36.6 bits (83), Expect = 6.4, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 820 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 868
Score = 36.6 bits (83), Expect = 6.4, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 849 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 899
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 900 DGKQFKCTVCDYTAAQKPQLLRHMEQHVSFKPFRCAHCHYSCNISGSLKRHYNRKH 955
>gi|332254413|ref|XP_003276325.1| PREDICTED: zinc finger protein ZFAT isoform 5 [Nomascus leucogenys]
Length = 1181
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 209 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 258
Score = 39.7 bits (91), Expect = 0.78, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 211 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 262
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 263 K-FACDYCSFTCLSKGHLKVHIERVH 287
Score = 36.6 bits (83), Expect = 6.4, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 820 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 868
Score = 36.6 bits (83), Expect = 6.4, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 849 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 899
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 900 DGKQFKCTVCDYTAAQKPQLLRHMEQHVSFKPFRCAHCHYSCNISGSLKRHYNRKH 955
>gi|260835632|ref|XP_002612812.1| hypothetical protein BRAFLDRAFT_225793 [Branchiostoma floridae]
gi|229298192|gb|EEN68821.1| hypothetical protein BRAFLDRAFT_225793 [Branchiostoma floridae]
Length = 259
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHI----RTHTGEKPYACGQCAFRSASVAGLHYH 194
+RT + C CDY S +SH+ RTHTGEKPY C QC + SA + L H
Sbjct: 19 MRTHTGEKPYKCDQCDYSSARKSTYKSHLSQHMRTHTGEKPYKCDQCDYSSARKSSLDNH 78
Query: 195 L 195
L
Sbjct: 79 L 79
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 112 PF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
P+ C+ C + L EH +RT + C CDY + + H+R H
Sbjct: 88 PYRCVEC-GYGTNQKARLTEH-------MRTHTGEKSYKCRHCDYSAAKKSTLDKHLRKH 139
Query: 171 TGEKPYACGQCAFRSASVAGLHYHLK 196
TGE P+ C QC FR+A + L H++
Sbjct: 140 TGETPFMCEQCGFRTARQSTLSQHMR 165
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+C C Y + + H+RTHTGEKPY C QC + SA + HL
Sbjct: 1 MCGECGYRTAYKSHISQHMRTHTGEKPYKCDQCDYSSARKSTYKSHL 47
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 62/160 (38%), Gaps = 20/160 (12%)
Query: 41 NLTFFITAQLVLMSLDQILNLNLSVLLVTTIPT---QNHSLCKHCHSQLSHLDLLDHCKT 97
+LT T + ++ N L + T + C+HC + LD
Sbjct: 78 HLTVHHTGEKPYRCVECGYGTNQKARLTEHMRTHTGEKSYKCRHCDYSAAKKSTLD---- 133
Query: 98 CSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYF 156
+R + T PF C C + + L +H +RT F C CDY
Sbjct: 134 --KHLRKHTGET--PFMCEQC-GFRTARQSTLSQH-------MRTHSGEKPFKCDLCDYS 181
Query: 157 SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ + +H HTGEKP C +C FR+A + L H++
Sbjct: 182 AARKSTLVAHRSKHTGEKPLMCSECDFRTARTSDLCRHMR 221
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C Y + + H+RTHTGEK Y C C + +A + L HL+K
Sbjct: 89 YRCVECGYGTNQKARLTEHMRTHTGEKSYKCRHCDYSAAKKSTLDKHLRK 138
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTG 172
C Y A ST + L +H +RT + C CDY S + +H+ HTG
Sbjct: 33 CDYSSARKSTYKSHLSQH-------MRTHTGEKPYKCDQCDYSSARKSSLDNHLTVHHTG 85
Query: 173 EKPYACGQCAFRSASVAGLHYHLK 196
EKPY C +C + + A L H++
Sbjct: 86 EKPYRCVECGYGTNQKARLTEHMR 109
>gi|194216159|ref|XP_001494583.2| PREDICTED: putative uncharacterized zinc finger protein 814-like
[Equus caballus]
Length = 987
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+VC C +RSH R HTGE+PY C +C A +GLHYH +
Sbjct: 624 YVCSECGKSFTISSALRSHQRVHTGERPYVCSECGKSFAFSSGLHYHCR 672
Score = 41.6 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 21/34 (61%)
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+R H R HTGE+PY C +C S A L YHL+
Sbjct: 863 LRYHQRVHTGERPYVCSECGKSFMSSANLSYHLR 896
Score = 40.8 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 10/73 (13%)
Query: 132 CRTC-KSMIRTDPFRHK---------FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
C C KS I + R+ +VC C + + H+R HTGE+PY C +C
Sbjct: 850 CSECGKSFIFSSKLRYHQRVHTGERPYVCSECGKSFMSSANLSYHLRVHTGERPYECSEC 909
Query: 182 AFRSASVAGLHYH 194
S + L YH
Sbjct: 910 EKSFTSSSALRYH 922
Score = 40.4 bits (93), Expect = 0.45, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+R H R HTGE+PY C +C A +GL YH
Sbjct: 723 LRCHQRVHTGERPYECSECGKSFAFSSGLRYH 754
Score = 37.7 bits (86), Expect = 2.6, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 21/45 (46%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
C C + N + H R HTGEKPY C +C + L YH
Sbjct: 570 CNECGKYFKNRWTLIQHQRIHTGEKPYVCSECGKSFTFSSTLQYH 614
Score = 37.0 bits (84), Expect = 4.7, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 24/56 (42%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+R + C C+ + +R H R H GE+PY C +C + L YH
Sbjct: 895 LRVHTGERPYECSECEKSFTSSSALRYHQRVHRGERPYECSECGKSFTCSSNLRYH 950
Score = 35.8 bits (81), Expect = 9.7, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 24/55 (43%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
R D + C C + + H R+HTGE+PY C C S + L YH
Sbjct: 504 RVDVGERPYKCSDCVKSFTSSSALSYHQRSHTGERPYECSDCGKSFISRSVLRYH 558
>gi|392933935|ref|NP_001255976.1| transcriptional repressor CTCFL isoform 7 [Homo sapiens]
gi|111550166|gb|ABH10105.1| BORIS transcription factor transcript variant A6 [Homo sapiens]
Length = 573
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 324 TSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 383
Query: 190 GLHYHLK 196
L H++
Sbjct: 384 KLKRHMR 390
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H +T K+ R F C C Y M +HIRTHTGE
Sbjct: 460 CRYCSAVFHERYA-LIQHQKTHKNEKR-------FKCKHCSYACKQERHMTAHIRTHTGE 511
Query: 174 KPYACGQCA--FRSASVAGLHYHLKKTYH 200
KP+ C C FR + H+ + YH
Sbjct: 512 KPFTCLSCNKCFRQKQLLNAHF---RKYH 537
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +R+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 358 KRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEKPYECHICHTRFTQSGTMKIHI 417
>gi|432958375|ref|XP_004086004.1| PREDICTED: oocyte zinc finger protein XlCOF6-like [Oryzias latipes]
Length = 430
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 52/121 (42%), Gaps = 21/121 (17%)
Query: 79 CKHCH---SQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC 135
CK C SQ SHL S+M FS CI C S H T
Sbjct: 18 CKECDKSFSQTSHLK--------SHMRTHTGEKPFS--CIECDKRFS--------HVFTL 59
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + F C CD + ++ H+RTHTGEKP++C +C + V L H+
Sbjct: 60 KKHMRTHTGKKPFSCVECDKRFSDSSSLQKHMRTHTGEKPFSCKECNKSFSFVYNLKTHM 119
Query: 196 K 196
+
Sbjct: 120 R 120
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT F C CD + +++H+RTHTGEKP++C +C R + ++ L H+
Sbjct: 340 KTHMRTHTGEKPFSCTECDKRFSQLFNLKNHMRTHTGEKPFSCTECDKRFSEISNLKKHM 399
Query: 196 K 196
+
Sbjct: 400 R 400
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT F C CD + +++H+RTHTGEKP++C +C R + ++ L H+
Sbjct: 228 KTHMRTHTEEKPFSCTECDKRFSQLFNLKNHMRTHTGEKPFSCTECDKRFSEISNLKKHM 287
Query: 196 K 196
+
Sbjct: 288 R 288
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT F C CD I ++ H+RTHTGEK ++C +C R + + L H+
Sbjct: 256 KNHMRTHTGEKPFSCTECDKRFSEISNLKKHMRTHTGEKAFSCVECDKRFSDSSSLQKHM 315
Query: 196 K 196
+
Sbjct: 316 R 316
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT F C CD I ++ H+RTHTGEKP++C C + L H+
Sbjct: 368 KNHMRTHTGEKPFSCTECDKRFSEISNLKKHMRTHTGEKPFSCKVCKKNFNQASSLKTHM 427
Query: 196 K 196
K
Sbjct: 428 K 428
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C CD ++SH+RTHTGEKP++C +C R + V L H++
Sbjct: 16 FSCKECDKSFSQTSHLKSHMRTHTGEKPFSCIECDKRFSHVFTLKKHMR 64
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT F C CD ++ H+RTHTGEKP++C +C + ++ L H+
Sbjct: 116 KTHMRTHTGEKPFSCKECDKSFSEKSKLKIHMRTHTGEKPFSCKECDKSFSEISTLKRHM 175
Query: 196 K 196
+
Sbjct: 176 R 176
Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT F C CD + ++ H+RTHTGEKP++C +C + V L H+
Sbjct: 284 KKHMRTHTGEKAFSCVECDKRFSDSSSLQKHMRTHTGEKPFSCKECNKSFSFVHNLKTHM 343
Query: 196 K 196
+
Sbjct: 344 R 344
Score = 43.1 bits (100), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC 181
+RT F C CD I ++ H+RTHTGEKP++C +C
Sbjct: 147 MRTHTGEKPFSCKECDKSFSEISTLKRHMRTHTGEKPFSCEEC 189
>gi|45504128|dbj|BAD12570.1| TR-ZFAT [Homo sapiens]
Length = 846
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 259 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 308
Score = 39.7 bits (91), Expect = 0.78, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 261 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 312
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 313 K-FACDYCSFTCLSKGHLKVHIERVH 337
>gi|297300136|ref|XP_002805540.1| PREDICTED: zinc finger protein ZFAT-like [Macaca mulatta]
gi|355698237|gb|EHH28785.1| hypothetical protein EGK_19295 [Macaca mulatta]
gi|355779967|gb|EHH64443.1| hypothetical protein EGM_17647 [Macaca fascicularis]
Length = 846
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 259 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 308
Score = 39.7 bits (91), Expect = 0.78, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 261 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 312
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 313 K-FACDYCSFTCLSKGHLKVHIERVH 337
>gi|260795621|ref|XP_002592803.1| hypothetical protein BRAFLDRAFT_65385 [Branchiostoma floridae]
gi|229278027|gb|EEN48814.1| hypothetical protein BRAFLDRAFT_65385 [Branchiostoma floridae]
Length = 597
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C +G ++ H+RTHTGEKPY C QC+ + + L H+
Sbjct: 492 KTHMRTHTLEKPYKCEECSRQFSQLGAVKEHMRTHTGEKPYQCEQCSRQFVQLVALKTHM 551
Query: 196 K 196
+
Sbjct: 552 R 552
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +R+ ++C C +G + HIRTHTGEKPY CG+C+ + L H+
Sbjct: 324 KTHMRSHTGEKPYMCEECSRQFSRLGHLEEHIRTHTGEKPYNCGECSREFRKLGHLTEHM 383
Query: 196 K 196
+
Sbjct: 384 R 384
Score = 43.1 bits (100), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C +G +++H+RTHTGEKPY C +C+ + + + L H++
Sbjct: 1 MRTHTGEKPYRCEECSRQFSELGHLKTHMRTHTGEKPYRCEECSRQFSRLDTLKKHMR 58
Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 35/60 (58%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
S +R+ ++ C C +G +++H+R+HTGEKPY C +C+ + + + L H++
Sbjct: 297 SSVRSVREEKRYRCEECSKQFSVLGALKTHMRSHTGEKPYMCEECSRQFSRLGHLEEHIR 356
Score = 42.7 bits (99), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C G ++ H+RTHTGEKPY C +C+ + + + L H++
Sbjct: 420 YICDECSRQFSRFGKLKRHMRTHTGEKPYTCEECSKQFSRLGHLKIHIR 468
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C + ++ H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 26 KTHMRTHTGEKPYRCEECSRQFSRLDTLKKHMRTHTGEKPYRCEECSRQFSELDTLKKHM 85
Query: 196 K 196
+
Sbjct: 86 R 86
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
K +RT + C C +G ++ HIRTHTGEKPY C +C+
Sbjct: 436 KRHMRTHTGEKPYTCEECSKQFSRLGHLKIHIRTHTGEKPYRCEECS 482
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 44/104 (42%), Gaps = 15/104 (14%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C Q S L L ++M + C C S L+ L +H RT
Sbjct: 12 CEECSRQFSELGHLK-----THMRTHTGEKPYR--CEECSRQFS-RLDTLKKHMRT---H 60
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
P+R C C + ++ H+RTHTGEKPY C +C+
Sbjct: 61 TGEKPYR----CEECSRQFSELDTLKKHMRTHTGEKPYRCEECS 100
Score = 36.2 bits (82), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 16/113 (14%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C Q S LD L +M + C C S ++E T +
Sbjct: 68 CEECSRQFSELDTLK-----KHMRTHTGEKPYR--CEECSRQFSDWVSE-----ETHATH 115
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL 191
P+R C C + +++H++THTGEKPY C +C+ + + + L
Sbjct: 116 TGEKPYR----CEECIRQFGRLDDLKNHMQTHTGEKPYRCEECSRQFSELGTL 164
Score = 35.8 bits (81), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY 176
K+ +RT + C C +G +++H+RTHTGEKPY
Sbjct: 548 KTHMRTHTGEKPYKCEECSRQFSVLGAIKTHMRTHTGEKPY 588
>gi|292658778|ref|NP_001167628.1| zinc finger protein ZFAT isoform 3 [Homo sapiens]
Length = 1181
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 209 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 258
Score = 39.3 bits (90), Expect = 0.80, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 211 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 262
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 263 K-FACDYCSFTCLSKGHLKVHIERVH 287
Score = 36.6 bits (83), Expect = 6.6, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 820 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 868
Score = 36.2 bits (82), Expect = 6.7, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 849 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 899
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 900 DGKQFKCTVCDYTAAQKPQLLRHMEQHVSFKPFRCAHCHYSCNISGSLKRHYNRKH 955
>gi|260811001|ref|XP_002600211.1| hypothetical protein BRAFLDRAFT_66716 [Branchiostoma floridae]
gi|229285497|gb|EEN56223.1| hypothetical protein BRAFLDRAFT_66716 [Branchiostoma floridae]
Length = 279
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R HTGEKPY CGQC + +A + L H+ K
Sbjct: 65 YMCGECGYRTATRSDLTKHMRKHTGEKPYKCGQCDYSAAQKSSLGRHMAK 114
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + H+ THTGEKPY C +C +R+ + + H+KK
Sbjct: 178 YKCDQCDYSAVEKPSLEEHMVTHTGEKPYMCNECGYRTDNSYNMSRHVKK 227
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 27/77 (35%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTG---------------------------EKPYACGQ 180
+ C CDY + + + SH++TH G EKPY CG+
Sbjct: 10 YTCSKCDYRTTDKSYLSSHMKTHLGAKYYKCDQCDYSGHVGHFDRHMAKHTREKPYMCGE 69
Query: 181 CAFRSASVAGLHYHLKK 197
C +R+A+ + L H++K
Sbjct: 70 CGYRTATRSDLTKHMRK 86
Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
H+ HT EKPY CG+C +R+A + L H+
Sbjct: 140 HMSEHTDEKPYMCGECGYRAADKSKLFTHM 169
>gi|260832618|ref|XP_002611254.1| hypothetical protein BRAFLDRAFT_207585 [Branchiostoma floridae]
gi|229296625|gb|EEN67264.1| hypothetical protein BRAFLDRAFT_207585 [Branchiostoma floridae]
Length = 235
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + G + H+ HTGEK Y CG+C +RSA + L H+ K
Sbjct: 149 YKCDQCDYSTAQRGNLDRHMAKHTGEKRYICGECGYRSADRSALKSHMVK 198
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+F+C C Y + + + +H+RTHTGEKPY C QC + + + L H+ K
Sbjct: 64 RFMCVECGYRTSHKSHLTAHMRTHTGEKPYRCDQCDYSATHKSQLDRHMAK 114
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
K +C C Y + + + H+RTHTG KPY C QC + +A L H+ K
Sbjct: 120 KLICGECGYRTADRSSLTVHMRTHTGVKPYKCDQCDYSTAQRGNLDRHMAK 170
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+++C C Y S + ++SH+ HTG KPY C C + +A L H+ K
Sbjct: 176 RYICGECGYRSADRSALKSHMVKHTGVKPYTCDYCDYSAARKFHLDRHMAK 226
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 25/51 (49%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+F C CDY + H R +TGEKPY C C + +A L H+ K
Sbjct: 8 RFECTECDYRPAKKVKLSRHTRKYTGEKPYKCDICDYSAAKKDHLESHMDK 58
>gi|260809005|ref|XP_002599297.1| hypothetical protein BRAFLDRAFT_259816 [Branchiostoma floridae]
gi|229284574|gb|EEN55309.1| hypothetical protein BRAFLDRAFT_259816 [Branchiostoma floridae]
Length = 265
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 48/113 (42%), Gaps = 17/113 (15%)
Query: 95 CKTCSYMIRPNAN--------NTFSPF----CIYCKAVLSTNLNELIEHCRTCKSMIRTD 142
C C Y + N N+ PF C Y S+ N L H T + R
Sbjct: 114 CDQCDYSAKLKHNLDRHVLKHNSEKPFKCDQCGYSAIRKSSLDNHLATHTGTLRKR-RPR 172
Query: 143 PFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
P++ C CDY + + + H+ THTGEKP++C QC + + L HL
Sbjct: 173 PYK----CEQCDYSAPHKSGLDRHVLTHTGEKPFSCDQCGYSTVQKCNLDKHL 221
Score = 35.8 bits (81), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
F C CDY + + H+ HTGEKP++C C +
Sbjct: 230 FKCEQCDYSAKQKHHLTRHLLKHTGEKPFSCDHCDY 265
>gi|260781288|ref|XP_002585750.1| hypothetical protein BRAFLDRAFT_257435 [Branchiostoma floridae]
gi|229270789|gb|EEN41761.1| hypothetical protein BRAFLDRAFT_257435 [Branchiostoma floridae]
Length = 208
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 58/136 (42%), Gaps = 18/136 (13%)
Query: 62 NLSVLLVTTIPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAV 120
NLS + T + +S C C Q LD L I + P+ C +C
Sbjct: 24 NLSKHIRTHTEERPYS-CGECGRQFRQLDNL--------TIHMRTHTGEKPYKCEHCNKS 74
Query: 121 LSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ 180
S + N K+ +RT + C C + G ++ H+RTHTGEKPY+CG+
Sbjct: 75 FSQSSN--------LKTHMRTHTGEKPYKCETCCKWFNERGSLKKHMRTHTGEKPYSCGE 126
Query: 181 CAFRSASVAGLHYHLK 196
C + + L H++
Sbjct: 127 CCKKFRVLGQLKRHMQ 142
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C +G + HIRTHT E+PY+CG+C + + L H++
Sbjct: 10 YQCGDCGKRLNQLGNLSKHIRTHTEERPYSCGECGRQFRQLDNLTIHMR 58
>gi|114621867|ref|XP_519973.2| PREDICTED: zinc finger protein ZFAT [Pan troglodytes]
Length = 1216
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 271 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 320
Score = 39.3 bits (90), Expect = 0.80, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 273 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 324
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 325 K-FACDYCSFTCLSKGHLKVHIERVH 349
Score = 36.6 bits (83), Expect = 6.6, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 882 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 930
Score = 36.2 bits (82), Expect = 6.7, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 911 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 961
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 962 DGKQFKCTVCDYTAAQKPQLLRHMEQHVSFKPFRCAHCHYSCNISGSLKRHYNRKH 1017
>gi|47222944|emb|CAF99100.1| unnamed protein product [Tetraodon nigroviridis]
Length = 879
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 15/84 (17%)
Query: 129 IEHCRTCKS-------------MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKP 175
+ HC+ C + + F H VC C + ++ H+RTHTGEKP
Sbjct: 593 LHHCKYCDYETAEQGLLNRHLLAVHSKNFAH--VCVECAKGFRHPSELKKHMRTHTGEKP 650
Query: 176 YACGQCAFRSASVAGLHYHLKKTY 199
Y C C FR A + L H+K +
Sbjct: 651 YHCPHCEFRCADQSNLKTHIKSRH 674
Score = 39.7 bits (91), Expect = 0.72, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 47/113 (41%), Gaps = 26/113 (23%)
Query: 83 HSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTD 142
H++ + + C+ C++ NA +TF+ + +LS + EL C+ C+ R
Sbjct: 755 HAETHKGNKVHQCRHCNF----NAPDTFT----LSRHILSLHTKELPFKCKRCRRGFRQP 806
Query: 143 PFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++ H++TH+G K Y C C + S +G H+
Sbjct: 807 ------------------AELKKHMKTHSGRKVYQCQYCEYNSTDASGFKRHV 841
>gi|402879200|ref|XP_003903236.1| PREDICTED: zinc finger protein ZFAT isoform 1 [Papio anubis]
Length = 1181
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 209 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 258
Score = 39.3 bits (90), Expect = 0.79, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 211 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 262
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 263 K-FACDYCSFTCLSKGHLKVHIERVH 287
Score = 36.6 bits (83), Expect = 6.6, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 820 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 868
Score = 36.2 bits (82), Expect = 6.7, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 849 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 899
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 900 DGKQFKCTVCDYTAAQKPQLLRHMEQHVSFKPFRCAHCHYSCNISGSLKRHYNRKH 955
>gi|351714304|gb|EHB17223.1| Zinc finger protein ZFAT [Heterocephalus glaber]
Length = 1289
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 260 FTCEYCHKVFKFKHSLQAHLRIHTNEKPYKCSQCSYASAIKANLNVHLRK 309
Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC V +H + ++ +R + C C Y S + H+R HTGE
Sbjct: 262 CEYCHKVFK------FKH--SLQAHLRIHTNEKPYKCSQCSYASAIKANLNVHLRKHTGE 313
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 314 K-FACDYCSFTCLSKGHLKVHIERVH 338
Score = 37.0 bits (84), Expect = 4.9, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 957 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 1007
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 1008 DGKQFKCMVCDYTAAQKPQLLRHMEQHASFKPFRCAHCHYSCNISGSLKRHYNRKH 1063
Score = 36.6 bits (83), Expect = 5.8, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 870 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 918
>gi|405963516|gb|EKC29081.1| Ras-responsive element-binding protein 1, partial [Crassostrea
gigas]
Length = 1652
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 10/96 (10%)
Query: 104 PNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCM 163
PN N F C YC V TN + H RT + P++ C C Y S + +
Sbjct: 630 PNKNGVFQ--CKYCDLVF-TNYRTMKGHTRT---HLGLSPYK----CNLCSYSSADKSTL 679
Query: 164 RSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
H+RTH GE+P+ C C F + A H++K +
Sbjct: 680 IRHLRTHNGERPFQCRICDFAFTTKANCERHVRKKH 715
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++ D + K C C +++ +R H+R+HTGE+P+ C C R + H KK
Sbjct: 1471 VVSADYMQRKVYCSLCPKRFWSLQDLRRHMRSHTGERPFECDICHKRFTLKHSMMRHRKK 1530
>gi|327286356|ref|XP_003227896.1| PREDICTED: zinc finger protein 135-like [Anolis carolinensis]
Length = 476
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 31/61 (50%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+S RT + C C + +RSH RTHTGEKPY C +C +GLH HL
Sbjct: 332 RSHERTHTGEKPYTCLECGQRFTHSSSLRSHERTHTGEKPYTCQECGQNFTHSSGLHSHL 391
Query: 196 K 196
+
Sbjct: 392 R 392
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 136 KSMIRTDPFRHKFVCYACDY-FSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+S RT + C C F++ G +RSH+RTHTGE+PY C +C GLH H
Sbjct: 248 RSHQRTHSGEKPYTCQECGQCFTHRSG-LRSHLRTHTGERPYKCPECGKCFTDTGGLHLH 306
Query: 195 LK 196
+
Sbjct: 307 KR 308
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%)
Query: 133 RTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLH 192
R +S IR + C C+ +I +RSH RTH+GEKPY C +C +GL
Sbjct: 217 RDLRSHIRIHTGEKPYTCLECEKSFTHISGLRSHQRTHSGEKPYTCQECGQCFTHRSGLR 276
Query: 193 YHLK 196
HL+
Sbjct: 277 SHLR 280
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 26/49 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C +I + SH RTHTGEKPY C +C A +GL H K
Sbjct: 148 YGCPECGKSFAHISGLNSHQRTHTGEKPYTCQECGMSFAQRSGLRAHEK 196
Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 131 HCRTCKSMIRTDPFRHKFVCYACDY-FSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
H + +S RT + C C F+++ G + SH+RTHTGEKPY C C +
Sbjct: 355 HSSSLRSHERTHTGEKPYTCQECGQNFTHSSG-LHSHLRTHTGEKPYKCLVCGQSFTQSS 413
Query: 190 GLHYH 194
LH H
Sbjct: 414 SLHKH 418
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C +RSH RTHTGEKPY C +C R + L H +
Sbjct: 316 YKCLECGKSFVQSADLRSHERTHTGEKPYTCLECGQRFTHSSSLRSHER 364
Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 27/60 (45%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
S RT + C C +R+H +THTGEKPY C +C A L H++
Sbjct: 165 SHQRTHTGEKPYTCQECGMSFAQRSGLRAHEKTHTGEKPYKCQECEKCFAQSRDLRSHIR 224
Score = 35.8 bits (81), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 27/61 (44%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+S +RT + C C + G + H R HTGEKPY C +C A L H
Sbjct: 276 RSHLRTHTGERPYKCPECGKCFTDTGGLHLHKRIHTGEKPYKCLECGKSFVQSADLRSHE 335
Query: 196 K 196
+
Sbjct: 336 R 336
>gi|291226358|ref|XP_002733160.1| PREDICTED: zinc finger protein 197-like [Saccoglossus kowalevskii]
Length = 811
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 11/98 (11%)
Query: 100 YMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSY 158
Y IR + N P+ C CK +T+ N K IRT + C C
Sbjct: 131 YHIRTHTNE--KPYHCEQCKKSFTTSCN--------LKQHIRTHTNEKPYQCEQCKKCFS 180
Query: 159 NIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G ++ H+RTHT EKPY C QC ++ YH++
Sbjct: 181 QSGSLKQHLRTHTNEKPYHCEQCEKSFTQLSYFKYHIR 218
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 39/89 (43%), Gaps = 10/89 (11%)
Query: 118 KAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHI 167
K + T+ NE HC C K IRT + C C+ ++ HI
Sbjct: 511 KYHIRTHTNEKPYHCEQCEKSFTSSNGLKYHIRTHTNERPYHCEQCEKSYTRSSDLKQHI 570
Query: 168 RTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RTHT EKPY C QC + + L YH++
Sbjct: 571 RTHTNEKPYHCEQCEKSFTTSSHLKYHIR 599
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 39/89 (43%), Gaps = 10/89 (11%)
Query: 118 KAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHI 167
K + T+ NE HC C K IRT + C C+ ++ HI
Sbjct: 623 KQHIRTHSNEKPYHCEQCEKSFTTSSHLKYHIRTHTNEKSYHCEQCEKSYTTSWNLKQHI 682
Query: 168 RTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RTHT EKPY C QC R + + L H++
Sbjct: 683 RTHTNEKPYHCEQCKKRLTTSSHLKQHIR 711
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 37/89 (41%), Gaps = 10/89 (11%)
Query: 118 KAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHI 167
K + T+ NE HC C K IRT C C G ++ H+
Sbjct: 46 KRHMRTHNNEKPYHCEQCEKSFNTSSHLKQHIRTHTNEKPHHCEQCKKCFSQSGNLKQHL 105
Query: 168 RTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RTHT EKPY C QC + L YH++
Sbjct: 106 RTHTNEKPYHCEQCEKSFTTSCSLKYHIR 134
Score = 42.7 bits (99), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 26/49 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C+ ++ HIRTHT EKPY C QC S GL YH++
Sbjct: 495 YHCEQCEKSFTTSSHLKYHIRTHTNEKPYHCEQCEKSFTSSNGLKYHIR 543
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 37/89 (41%), Gaps = 10/89 (11%)
Query: 118 KAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHI 167
K L T+ NE HC C K IR + + C C ++ HI
Sbjct: 186 KQHLRTHTNEKPYHCEQCEKSFTQLSYFKYHIRAHTNENPYHCQQCPKSYTTSSHLKRHI 245
Query: 168 RTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RTH+ EKPY C QC S + L H++
Sbjct: 246 RTHSNEKPYHCEQCEKNFTSSSNLKRHMR 274
Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 31/75 (41%), Gaps = 10/75 (13%)
Query: 118 KAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHI 167
K + T+ NE HC C K IRT + C C ++ HI
Sbjct: 651 KYHIRTHTNEKSYHCEQCEKSYTTSWNLKQHIRTHTNEKPYHCEQCKKRLTTSSHLKQHI 710
Query: 168 RTHTGEKPYACGQCA 182
RTHT EKPY C QC
Sbjct: 711 RTHTNEKPYYCEQCE 725
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 10/90 (11%)
Query: 116 YCKAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRS 165
Y K + + NE HC+ C K IRT + C C+ + ++
Sbjct: 212 YFKYHIRAHTNENPYHCQQCPKSYTTSSHLKRHIRTHSNEKPYHCEQCEKNFTSSSNLKR 271
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
H+RTHT +K Y C QC + L YH+
Sbjct: 272 HMRTHTNDKLYHCEQCEKSFTQSSNLKYHM 301
>gi|219518837|gb|AAI43520.1| ZFAT protein [Homo sapiens]
Length = 1181
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 209 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 258
Score = 39.3 bits (90), Expect = 0.82, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 211 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 262
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 263 K-FACDYCSFTCLSKGHLKVHIERVH 287
Score = 36.2 bits (82), Expect = 6.7, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 820 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 868
Score = 36.2 bits (82), Expect = 6.9, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 849 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 899
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 900 DGKQFKCTVCDYTAAQKPQLLRHMEQHVSFKPFRCAHCHYSCNISGSLKRHYNRKH 955
>gi|260783848|ref|XP_002586983.1| hypothetical protein BRAFLDRAFT_102104 [Branchiostoma floridae]
gi|229272116|gb|EEN42994.1| hypothetical protein BRAFLDRAFT_102104 [Branchiostoma floridae]
Length = 584
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C Y S + HIR+HTGEKPY C QC F +A + L H+
Sbjct: 456 FICEQCGYRSVEKAQLARHIRSHTGEKPYKCDQCDFAAADTSYLTRHI 503
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT F C CDY S + H+ THTGEKPY C +C RSA + + H K+
Sbjct: 251 MRTHTGEKPFKCDQCDYSSARKSHLDLHVLTHTGEKPYVCEECGHRSAGWSNMARHKKQ 309
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + S N + H++TH GEKPY C QC F GL H+ K
Sbjct: 400 YMCGECGFRSGNRAALSRHVKTHEGEKPYKCEQCDFAHMERRGLDRHMMK 449
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
S +R + C CDY + + H TH+G KPY CG+C FRS + A L H+K
Sbjct: 361 SHMRKHRGEKPYKCDMCDYCTAFRSNLARHKATHSGGKPYMCGECGFRSGNRAALSRHVK 420
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C C +++ +ELI H R I T HK C CD+ + + H THTGE
Sbjct: 150 CAECGHKMASK-SELISHVR-----IHTGEKPHK--CDQCDFSTAHRTSFTQHKLTHTGE 201
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
KPY C CA+R+ L H+K
Sbjct: 202 KPYQCEVCAYRTGQKEHLARHMK 224
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++T + +VC C + + + + H+RTHTGEKP+ C QC + SA + L H+
Sbjct: 223 MKTHSGQKPYVCGVCGHRTGDKYNLARHMRTHTGEKPFKCDQCDYSSARKSHLDLHV 279
Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C++ + + H+ HTGEKP+AC +C FR+A L H++K
Sbjct: 316 YKCELCNFSATQKNNLARHMHQHTGEKPHACSKCDFRTAHKVSLTSHMRK 365
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
++ C CDY + + H+ HTG KPY C +C +R+A
Sbjct: 35 RYKCDQCDYVATQKSNLDRHMAKHTGAKPYRCDRCGYRTA 74
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C + + + H+RTHTGE+PY C QC + +A H++K
Sbjct: 92 FTCKQCGLGAASQSNLVVHMRTHTGERPYQCEQCEYSAAQKHNFVLHMRK 141
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+ C C + + + + H R HTGEKPY C QC + S L +H
Sbjct: 513 YRCETCGFRTNDPSVLYHHRRKHTGEKPYKCDQCDYASTQKRSLAWH 559
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C Y + + H++TH+G+KPY CG C R+ L H++
Sbjct: 204 YQCEVCAYRTGQKEHLARHMKTHSGQKPYVCGVCGHRTGDKYNLARHMR 252
Score = 36.2 bits (82), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHI-RTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
IR+ + C CD+ + + + HI + HT E+PY C C FR+ + L++H +K
Sbjct: 475 IRSHTGEKPYKCDQCDFAAADTSYLTRHILKHHTDERPYRCETCGFRTNDPSVLYHHRRK 534
>gi|8668|emb|CAA68371.1| unnamed protein product [Drosophila melanogaster]
Length = 944
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 16/126 (12%)
Query: 79 CKHCHSQLS---HLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRT- 134
CK C + HL +CS +N T + C C V L+ L H +
Sbjct: 350 CKICGKDFTRSYHLKRHQKYSSCS------SNETDTMSCKVCDRVF-YRLDNLRSHLKQH 402
Query: 135 CKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
+ + P +++C+ C Y++ + HIRTHTGEKP+ C C + +++ L H
Sbjct: 403 LGTQVVKKP---EYMCHTCKNCFYSLSTLNIHIRTHTGEKPFDCDLCDKKFSALVALKKH 459
Query: 195 LKKTYH 200
+ YH
Sbjct: 460 --RRYH 463
>gi|397519981|ref|XP_003830127.1| PREDICTED: zinc finger protein ZFAT isoform 6 [Pan paniscus]
Length = 1145
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 259 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 308
Score = 39.3 bits (90), Expect = 0.85, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 261 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 312
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 313 K-FACDYCSFTCLSKGHLKVHIERVH 337
Score = 36.2 bits (82), Expect = 6.9, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 870 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 918
Score = 36.2 bits (82), Expect = 7.0, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 899 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 949
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 950 DGKQFKCTVCDYTAAQKPQLLRHMEQHVSFKPFRCAHCHYSCNISGSLKRHYNRKH 1005
>gi|260832602|ref|XP_002611246.1| hypothetical protein BRAFLDRAFT_148654 [Branchiostoma floridae]
gi|229296617|gb|EEN67256.1| hypothetical protein BRAFLDRAFT_148654 [Branchiostoma floridae]
Length = 236
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
IR + C CDY + G ++ H+ HTG KPY CG+C +R+A L H+++
Sbjct: 29 IRRHTGEKPYKCDLCDYSATQKGSLKQHMAKHTGRKPYMCGECGYRTAHRFHLSKHMRR 87
Score = 42.7 bits (99), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+FVC C Y + + + HIR HTGEKPY C C + + L H+ K
Sbjct: 9 RFVCETCGYRTSDKSSLIVHIRRHTGEKPYKCDLCDYSATQKGSLKQHMAK 59
Score = 42.7 bits (99), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+R HTGEKPY C QC + SA+ L H+
Sbjct: 122 YICGKCGYRTAVRSHLTGHMRKHTGEKPYKCDQCDYASATKCNLDQHM 169
Score = 42.7 bits (99), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C+Y + + H+RTHTGEKP+ C QC + + L H+ K
Sbjct: 178 FMCGECEYRTAVKLRLSQHLRTHTGEKPFKCAQCDYSATQKGSLKQHMAK 227
Score = 42.4 bits (98), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + H+ HTG KPY CG+C +R+A + L H++K
Sbjct: 94 YKCDQCDYSTAEKSDLVRHMAKHTGNKPYICGKCGYRTAVRSHLTGHMRK 143
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
R ++C C Y + + + H+R HTGEKPY C QC + +A + L H+ K
Sbjct: 63 RKPYMCGECGYRTAHRFHLSKHMRRHTGEKPYKCDQCDYSTAEKSDLVRHMAK 115
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY S + H+ HTG KP+ CG+C +R+A L HL+
Sbjct: 150 YKCDQCDYASATKCNLDQHMARHTGVKPFMCGECEYRTAVKLRLSQHLR 198
Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 21/40 (52%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAC 178
+RT F C CDY + G ++ H+ HTG KPY C
Sbjct: 197 LRTHTGEKPFKCAQCDYSATQKGSLKQHMAKHTGRKPYLC 236
>gi|260782896|ref|XP_002586516.1| hypothetical protein BRAFLDRAFT_170708 [Branchiostoma floridae]
gi|229271631|gb|EEN42527.1| hypothetical protein BRAFLDRAFT_170708 [Branchiostoma floridae]
Length = 196
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 119 AVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAC 178
+T + L+EH +RT + C CD+ + + + H+ HTGEKPY C
Sbjct: 124 GYRTTQKSHLVEH-------MRTHTAEKPYKCDHCDFSTAHKSNLNRHLAMHTGEKPYMC 176
Query: 179 GQCAFRSASVAGLHYHLK 196
G+C +R+A + L H++
Sbjct: 177 GECGYRTAHKSHLSQHMR 194
Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTG+KPY C QC + +A + L+ HL
Sbjct: 6 YMCGECGYMTALKSDLSKHMRTHTGDKPYKCDQCDYSAAHKSNLNQHL 53
Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTG+KPY C QC + +A + L+ HL
Sbjct: 62 YMCGECGYMTALKSDLSKHMRTHTGDKPYKCDQCDYSAAHKSNLNRHL 109
Score = 43.5 bits (101), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + H+ HTG+KPY CG+C +R+ + L H++
Sbjct: 81 MRTHTGDKPYKCDQCDYSAAHKSNLNRHLAMHTGDKPYMCGECGYRTTQKSHLVEHMR 138
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHT EKPY C C F +A + L+ HL
Sbjct: 118 YMCGECGYRTTQKSHLVEHMRTHTAEKPYKCDHCDFSTAHKSNLNRHL 165
Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + H+ HTG KPY CG+C + +A + L H++
Sbjct: 25 MRTHTGDKPYKCDQCDYSAAHKSNLNQHLVMHTGYKPYMCGECGYMTALKSDLSKHMR 82
>gi|332254415|ref|XP_003276326.1| PREDICTED: zinc finger protein ZFAT isoform 6 [Nomascus leucogenys]
Length = 1145
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 259 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 308
Score = 39.3 bits (90), Expect = 0.86, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 261 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 312
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 313 K-FACDYCSFTCLSKGHLKVHIERVH 337
Score = 36.2 bits (82), Expect = 6.9, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 870 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 918
Score = 36.2 bits (82), Expect = 7.0, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 899 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 949
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 950 DGKQFKCTVCDYTAAQKPQLLRHMEQHVSFKPFRCAHCHYSCNISGSLKRHYNRKH 1005
>gi|327289547|ref|XP_003229486.1| PREDICTED: zinc finger protein 135-like [Anolis carolinensis]
Length = 397
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 26/49 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C G +RSH RTHTGEKPY C +C R GLH H +
Sbjct: 117 YKCLKCGKRFTGSGSLRSHQRTHTGEKPYKCMECGKRFTGSGGLHSHQR 165
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 23/34 (67%)
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RSH RTHTGEKPY C +C + + GLH H +
Sbjct: 216 LRSHQRTHTGEKPYKCLECGRSYSHLTGLHRHQR 249
Score = 39.3 bits (90), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
+S RT + C C + G + SH RTHTGEKPY C +C R +
Sbjct: 329 RSHQRTHIGEKPYKCLECGHSFTQSGSLHSHQRTHTGEKPYKCLECGQRFTQIG 382
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 148 FVCYACDY-FSYNIGCMRSHIRTHTGEKPYACGQCA 182
+ C C F+YN G + SH RTHTGEKPY C +C
Sbjct: 285 YKCLECGQSFAYNSG-LHSHKRTHTGEKPYKCHECG 319
Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 26/60 (43%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
S RT + C+ C +RSH RTH GEKPY C +C LH H +
Sbjct: 302 SHKRTHTGEKPYKCHECGQSFARSTHLRSHQRTHIGEKPYKCLECGHSFTQSGSLHSHQR 361
Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+R+H R HTGEKPY C +C A +GLH H +
Sbjct: 272 LRAHQRIHTGEKPYKCLECGQSFAYNSGLHSHKR 305
>gi|260786901|ref|XP_002588495.1| hypothetical protein BRAFLDRAFT_199080 [Branchiostoma floridae]
gi|229273657|gb|EEN44506.1| hypothetical protein BRAFLDRAFT_199080 [Branchiostoma floridae]
Length = 80
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 148 FVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + G + H+ T HTGEKPY CG+C +R+A+ L H++
Sbjct: 5 YKCDQCDYSAAQKGQLDKHVMTKHTGEKPYMCGECGYRTAARYALSRHMR 54
Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
++C C Y + + H+RTHTGEKPY C C + +A L H
Sbjct: 34 YMCGECGYRTAARYALSRHMRTHTGEKPYKCDICDYSAAQKGNLDEH 80
>gi|549834|sp|Q01611.1|ZFY1_XENLA RecName: Full=Zinc finger Y-chromosomal protein 1; Short=ZFY-1
gi|65269|emb|CAA48165.1| XZFY-1 [Xenopus laevis]
Length = 794
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKT 198
+ + F H +C C + ++ H+RTHTGEKPY C C +RSA + L H+K
Sbjct: 530 VHSKSFPH--ICVECGKGFRHPSELKKHMRTHTGEKPYLCQYCDYRSADSSNLKTHVKTK 587
Query: 199 Y 199
+
Sbjct: 588 H 588
Score = 39.7 bits (91), Expect = 0.75, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 43/104 (41%), Gaps = 26/104 (25%)
Query: 92 LDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCY 151
+ C+ C + I PF + + +LS + EL C+ CK FR +
Sbjct: 678 MHQCRHCEFHIA-------DPF-VLSRHILSVHTKELPYRCKRCKK-----GFRQQIE-- 722
Query: 152 ACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++ H++TH+G+K Y C C + + +G H+
Sbjct: 723 -----------LKKHMKTHSGKKVYQCEYCEYNTTDASGFKRHV 755
>gi|148228689|ref|NP_001081639.1| zinc finger Y-chromosomal protein 1 [Xenopus laevis]
gi|47123880|gb|AAH70611.1| XZFY-1 protein [Xenopus laevis]
Length = 794
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKT 198
+ + F H +C C + ++ H+RTHTGEKPY C C +RSA + L H+K
Sbjct: 530 VHSKSFPH--ICVECGKGFRHPSELKKHMRTHTGEKPYLCQYCDYRSADSSNLKTHVKTK 587
Query: 199 Y 199
+
Sbjct: 588 H 588
Score = 39.7 bits (91), Expect = 0.75, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 43/104 (41%), Gaps = 26/104 (25%)
Query: 92 LDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCY 151
+ C+ C + I PF + + +LS + EL C+ CK FR +
Sbjct: 678 MHQCRHCEFHIA-------DPF-VLSRHILSVHTKELPYRCKRCKK-----GFRQQIE-- 722
Query: 152 ACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++ H++TH+G+K Y C C + + +G H+
Sbjct: 723 -----------LKKHMKTHSGKKVYQCEYCEYNTTDASGFKRHV 755
>gi|260832568|ref|XP_002611229.1| hypothetical protein BRAFLDRAFT_71190 [Branchiostoma floridae]
gi|229296600|gb|EEN67239.1| hypothetical protein BRAFLDRAFT_71190 [Branchiostoma floridae]
Length = 210
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + H THTGEKP+ CG+C +R+A + L H++K
Sbjct: 10 YKCDQCDYSAAQKCNLDKHKATHTGEKPFMCGECGYRTADRSHLTAHMRK 59
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C CDY + + H+RTHTG KPY C QC + + L+ HL K
Sbjct: 157 YICGECDYRTAGRSHLSRHMRTHTGVKPYKCDQCDYSATEKGYLNKHLAK 206
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 156 FSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F G + H HTGEKPY CG+C +R+A + L H++
Sbjct: 137 FECTKGTLDRHKAKHTGEKPYICGECDYRTAGRSHLSRHMR 177
>gi|260804535|ref|XP_002597143.1| hypothetical protein BRAFLDRAFT_76327 [Branchiostoma floridae]
gi|229282406|gb|EEN53155.1| hypothetical protein BRAFLDRAFT_76327 [Branchiostoma floridae]
Length = 277
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 52/120 (43%), Gaps = 19/120 (15%)
Query: 79 CKHCHSQLSHLD-LLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
C C Q HL L+ H +T +N P+ C C S L L H
Sbjct: 28 CSECGKQFRHLSALIRHMRT---------HNGEKPYRCEECSKEFS-ELGNLKRH----- 72
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IRT + + C C +G ++ HIRTHTGEK Y C +C+ + + + L H++
Sbjct: 73 --IRTHSGENPYKCEECSKQFSELGNLKRHIRTHTGEKSYRCEECSRQFSELGSLKKHMR 130
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT ++C C +G ++ HIRTH GEKPY C +C+ + + + L H+
Sbjct: 210 KRHMRTHTGEKPYICEECSRQFSELGHLKKHIRTHNGEKPYTCEECSRQFSQLENLKRHM 269
Query: 196 K 196
+
Sbjct: 270 R 270
Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 53/129 (41%), Gaps = 15/129 (11%)
Query: 68 VTTIPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNE 127
+ T +N C+ C Q S L L IR + S C C S L
Sbjct: 73 IRTHSGENPYKCEECSKQFSELGNL------KRHIRTHTGEK-SYRCEECSRQFS-ELGS 124
Query: 128 LIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSAS 187
L +H +R + C C +G ++ H+RTHTGEKPY C +C+ + +
Sbjct: 125 LKKH-------MRIHTGEKPYTCVECSKQFSQLGTLKKHMRTHTGEKPYKCEECSKQFSV 177
Query: 188 VAGLHYHLK 196
+ L H++
Sbjct: 178 LGDLKRHMR 186
Score = 35.8 bits (81), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 143 PFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P HK C C ++ + H+RTH GEKPY C +C+ + + L H++
Sbjct: 23 PRTHK--CSECGKQFRHLSALIRHMRTHNGEKPYRCEECSKEFSELGNLKRHIR 74
>gi|444518784|gb|ELV12381.1| Zinc finger protein 642 [Tupaia chinensis]
Length = 729
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C C+ S N++ LI+H +RT F C C I + HIR HTGE
Sbjct: 560 CDKCQKAFSQNIS-LIQH-------LRTHSGEKPFTCNECGKTFRQIRHLSEHIRIHTGE 611
Query: 174 KPYACGQCAFRSASVAGLHYH 194
KPYAC C + A L +H
Sbjct: 612 KPYACTACCKTFSHRAYLTHH 632
Score = 40.4 bits (93), Expect = 0.39, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 148 FVCYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+VC C FS NI ++ H+RTH+GEKP+ C +C + L H++
Sbjct: 558 YVCDKCQKAFSQNISLIQ-HLRTHSGEKPFTCNECGKTFRQIRHLSEHIR 606
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 10/84 (11%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C C+ + ++ L EH R PFR C C + +H R HTGE
Sbjct: 476 CNICEKIFKQPIH-LTEHMRIHTG---EKPFR----CKECGRAFSQSASLSTHQRIHTGE 527
Query: 174 KPYACGQC--AFRSASVAGLHYHL 195
KP+ C +C AFR S H+ +
Sbjct: 528 KPFECEECGKAFRHRSSLNQHHRI 551
>gi|432923636|ref|XP_004080486.1| PREDICTED: zinc finger protein Pegasus-like [Oryzias latipes]
Length = 411
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC + + + +IEH R I T H+ C C + S + +H+R+HTGE
Sbjct: 88 CRYC-SYANKGMGRVIEHIR-----IHTGEKPHR--CQLCPFASAYERHLEAHMRSHTGE 139
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
KPY C C FR + + L +H ++ +
Sbjct: 140 KPYKCDLCTFRCSDRSNLSHHRRRRH 165
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
K+ C C Y + +G + HIR HTGEKP+ C C F SA L H++
Sbjct: 85 KYKCRYCSYANKGMGRVIEHIRIHTGEKPHRCQLCPFASAYERHLEAHMR 134
>gi|260824461|ref|XP_002607186.1| hypothetical protein BRAFLDRAFT_57334 [Branchiostoma floridae]
gi|229292532|gb|EEN63196.1| hypothetical protein BRAFLDRAFT_57334 [Branchiostoma floridae]
Length = 362
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C Q SHL L+ +M + C C S +L L K+
Sbjct: 56 CEECSKQFSHLGNLE-----RHMRTHTGEKPYR--CEECSKQFS-DLGTL-------KTH 100
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C +G ++ H+RTHTGEKPY C +C+ + + + L H++
Sbjct: 101 MRTHTGEKPYKCEDCSKQFSELGSLKRHMRTHTGEKPYKCEECSKQFSELGSLKTHMR 158
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C +G ++ H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 154 KTHMRTHTGEKPYKCEDCSKQFSELGSLKRHMRTHTGEKPYKCEECSKQFSELGSLKTHM 213
Query: 196 K 196
+
Sbjct: 214 R 214
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C Q S L L ++M + C C +L L +H RT
Sbjct: 196 CEECSKQFSELGSLK-----THMRTHTGEKPYK--CEECSKQF-IDLGNLTKHVRT---H 244
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C C ++G + H+RTHTGEKPY C +C+ + + + L H++
Sbjct: 245 TGEKPYR----CEECSKQFIDLGNLTKHVRTHTGEKPYRCEECSRQFSELGSLKRHMR 298
Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C +G +++H+RTHTGEKPY C +C+ + + L H+
Sbjct: 182 KRHMRTHTGEKPYKCEECSKQFSELGSLKTHMRTHTGEKPYKCEECSKQFIDLGNLTKHV 241
Query: 196 K 196
+
Sbjct: 242 R 242
Score = 42.4 bits (98), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C ++G + H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 42 KKHLRTHTGEELYRCEECSKQFSHLGNLERHMRTHTGEKPYRCEECSKQFSDLGTLKTHM 101
Query: 196 K 196
+
Sbjct: 102 R 102
Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 142 DPFR-HKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
DP R HK C CD N+ ++ H+RTHTGE+ Y C +C+ + + + L H++
Sbjct: 21 DPSRPHK--CSECDKQFRNMSGLKKHLRTHTGEELYRCEECSKQFSHLGNLERHMR 74
>gi|119612585|gb|EAW92179.1| zinc finger protein 406 [Homo sapiens]
Length = 1154
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 259 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 308
Score = 39.3 bits (90), Expect = 0.90, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 261 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 312
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 313 K-FACDYCSFTCLSKGHLKVHIERVH 337
Score = 36.2 bits (82), Expect = 7.2, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 870 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 918
Score = 36.2 bits (82), Expect = 7.5, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 899 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 949
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 950 DGKQFKCTVCDYTAAQKPQLLRHMEQHVSFKPFRCAHCHYSCNISGSLKRHYNRKH 1005
>gi|410055360|ref|XP_003953831.1| PREDICTED: transcriptional repressor CTCFL [Pan troglodytes]
Length = 573
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 324 TSGELVRHTRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 383
Query: 190 GLHYHLK 196
L H++
Sbjct: 384 KLKRHMR 390
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H +T K+ R F C C Y M +HIRTHTGE
Sbjct: 460 CRYCPAVFHERYA-LIQHQKTHKNEKR-------FKCKHCSYACKQERHMTAHIRTHTGE 511
Query: 174 KPYACGQCA--FRSASVAGLHYHLKKTYH 200
KP+ C C FR + H+ + YH
Sbjct: 512 KPFTCLSCNKCFRQKQLLNAHF---RKYH 537
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +R+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 358 KRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEKPYECHICHTRFTQSGTMKIHI 417
>gi|292658780|ref|NP_001167629.1| zinc finger protein ZFAT isoform 4 [Homo sapiens]
Length = 1145
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 259 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 308
Score = 39.3 bits (90), Expect = 0.92, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 261 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 312
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 313 K-FACDYCSFTCLSKGHLKVHIERVH 337
Score = 36.2 bits (82), Expect = 7.3, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 870 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 918
Score = 36.2 bits (82), Expect = 7.7, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 899 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 949
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 950 DGKQFKCTVCDYTAAQKPQLLRHMEQHVSFKPFRCAHCHYSCNISGSLKRHYNRKH 1005
>gi|260822661|ref|XP_002606720.1| hypothetical protein BRAFLDRAFT_82360 [Branchiostoma floridae]
gi|229292064|gb|EEN62730.1| hypothetical protein BRAFLDRAFT_82360 [Branchiostoma floridae]
Length = 879
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 54/120 (45%), Gaps = 17/120 (14%)
Query: 78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
+CK C Q S + L I + P+ C C+ T L+ L +H RT
Sbjct: 350 ICKECRKQFSRPNHLK--------IHMRTHTGEKPYRCEECRKQFRT-LSNLKDHMRT-- 398
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C C +G ++SH+RTHTGEKPY C +C + + + L H++
Sbjct: 399 -HTGEKPYR----CEECSKQFSMLGNLKSHMRTHTGEKPYRCEECRRQFSRLGSLRKHMR 453
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT F+C C + ++ ++ HIRTHTGEK + C +C+ + ++++ L H+
Sbjct: 178 KRHMRTHSGEKPFMCEECSWHFTDLSNLKKHIRTHTGEKSHRCEECSRQFSALSDLKRHM 237
Query: 196 K 196
K
Sbjct: 238 K 238
Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C +G +++HIRTHTGEKPY C C+ + + + L H++
Sbjct: 134 YRCEECSRQFSQLGHLKTHIRTHTGEKPYRCEDCSRQFSQGSDLKRHMR 182
Score = 42.7 bits (99), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
KS +RT + C C G ++ H+RTHTGEKPY+C +C+ + + L H+
Sbjct: 757 KSHMRTHTGEKPYQCEECGRQFSQQGELKVHMRTHTGEKPYSCEECSKQFSQPYQLKQHM 816
Query: 196 K 196
+
Sbjct: 817 Q 817
Score = 42.4 bits (98), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 151 YACDYFSYNIG--C-MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
Y C+ S G C ++ H+RTHTGEKPY C +C+ + +++ GL H+K
Sbjct: 293 YKCEECSKQFGRPCDLKIHMRTHTGEKPYRCEECSRQFSTLTGLKAHMK 341
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C + ++SH+RTHTGEKPY C +C+ + + ++ L H+K
Sbjct: 825 YKCEDCSRQFSQLSNLKSHMRTHTGEKPYRCEECSKQFSQLSNLKTHMK 873
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C Q S L L+ S+M + + C C S + N KS
Sbjct: 519 CEECSKQFSQLVNLE-----SHMRTHSGEKPYR--CEECSKQFSHSSN--------LKSH 563
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C+ + ++SH+RTHTGEKPY C C+ + + ++ L H++
Sbjct: 564 MRTHTGEKPYRCEECNRQFSLLNHLKSHMRTHTGEKPYRCEDCSRQFSHLSHLKSHMR 621
Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C C+ ST N L +H RT P++ C C ++ +++H+RTHTGE
Sbjct: 659 CEECRKQFSTPDN-LRKHQRT---HTGEKPYK----CEECSRQFSHLCHLKTHMRTHTGE 710
Query: 174 KPYACGQCAFRSASVAGLHYHLK 196
KPY C C+ + + ++ L H++
Sbjct: 711 KPYKCESCSKQFSQLSNLKVHMR 733
Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C + + SH+RTH+GEKPY C +C+ + + + L H++
Sbjct: 508 MRTHTGEKPYRCEECSKQFSQLVNLESHMRTHSGEKPYRCEECSKQFSHSSNLKSHMR 565
Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Query: 118 KAVLSTNLNELIEHCRTCKSMIRT-DPFR-HK--------FVCYACDYFSYNIGCMRSHI 167
K + T+ E C C RT D R H+ + C C IG ++ H+
Sbjct: 66 KVHMRTHTGEKPYRCEKCSKQFRTQDHLRLHQRTHTGEKPYKCKDCGKQFCQIGHLKRHM 125
Query: 168 RTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+THT EKPY C +C+ + + + L H++
Sbjct: 126 QTHTSEKPYRCEECSRQFSQLGHLKTHIR 154
Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA--FRSASVAGLH 192
+ C C +G ++ H+RTHTGEKPY C +C+ FR+ LH
Sbjct: 50 YRCEECSKQFKLLGHLKVHMRTHTGEKPYRCEKCSKQFRTQDHLRLH 96
>gi|149744773|ref|XP_001500955.1| PREDICTED: zinc finger protein 711 isoform 1 [Equus caballus]
Length = 813
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
VC C + ++ H+RTHTGEKPY C C FR A + L H+K +
Sbjct: 558 VCVECGKGFRHPSELKKHMRTHTGEKPYQCQYCVFRCADQSNLKTHIKSKH 608
>gi|426392246|ref|XP_004062467.1| PREDICTED: transcriptional repressor CTCFL isoform 3 [Gorilla
gorilla gorilla]
Length = 627
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 324 TSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 383
Query: 190 GLHYHLK 196
L H++
Sbjct: 384 KLKRHMR 390
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H +T K+ R F C C Y M +HIRTHTGE
Sbjct: 460 CRYCSAVFHERYA-LIQHQKTHKNEKR-------FKCKHCSYACKQERHMTAHIRTHTGE 511
Query: 174 KPYACGQCA--FRSASVAGLHYHLKKTYH 200
KP+ C C FR + H+ + YH
Sbjct: 512 KPFTCLFCNKCFRQKQLLNAHF---RKYH 537
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +R+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 358 KRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEKPYECHICHTRFTQSGTMKIHI 417
>gi|312081882|ref|XP_003143213.1| zinc finger protein 422 [Loa loa]
Length = 309
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 126 NELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AF 183
N+ H T K IRT +VC C+ ++H+RTHTGEKPY C C +F
Sbjct: 235 NKTFPHSSTLKDHIRTHTGEKPYVCPICNNSFAQSPSRKNHMRTHTGEKPYICWICNGSF 294
Query: 184 RSASVAGLHYH 194
+S+ G Y
Sbjct: 295 AQSSITGNPYE 305
>gi|260835962|ref|XP_002612976.1| hypothetical protein BRAFLDRAFT_120820 [Branchiostoma floridae]
gi|229298358|gb|EEN68985.1| hypothetical protein BRAFLDRAFT_120820 [Branchiostoma floridae]
Length = 517
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +R+ + C C +G ++ HI+THTGE+PY C +C R A ++GL H+
Sbjct: 135 KRHMRSHTGEKPYECEKCGKRFAGLGSLKVHIKTHTGERPYHCEECGKRFAQLSGLTVHI 194
Query: 196 K 196
K
Sbjct: 195 K 195
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C G +R+H+RTHTGEKPY C +C R +++ L H++
Sbjct: 324 YQCETCKRRFSQQGHLRTHMRTHTGEKPYRCEECGKRFSALGDLKKHIR 372
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 57/142 (40%), Gaps = 13/142 (9%)
Query: 68 VTTIPTQNHSLCKHCHSQLSHLDLLD-HCKTCSYMIRPNANNTFSPFCIYC--KAVLSTN 124
+ T Q C+ C+ S LD L H +T + R F + KA + T+
Sbjct: 371 IRTHTGQKPYRCEECNKHFSRLDSLKTHMQTHTGEKRYGCEECGKQFSLLMTLKAHMKTH 430
Query: 125 LNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK 174
E C C K +RT + C C + ++ H++THTGEK
Sbjct: 431 TGEKPYKCEECGKQFSQLCNLKQHMRTHTGEKLYGCEECGKQFRQLAHLKEHMKTHTGEK 490
Query: 175 PYACGQCAFRSASVAGLHYHLK 196
PY C +C + ++ L H++
Sbjct: 491 PYRCEECGRQFSASCNLKRHMR 512
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
VC YF ++ H+RTHTGEKPY CG C+ + + L HL+
Sbjct: 11 VCSKLFYFPKDVA---RHMRTHTGEKPYGCGVCSRQFSQSDSLKGHLR 55
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 136 KSMIRTDPFRHKFVCYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
K +RT + C C +F + +R H++THTGEKPY C +C + A++ L H
Sbjct: 51 KGHLRTHTDEKPYRCEECGKHFGQPMN-LRRHMKTHTGEKPYMCEECGRQFATLTTLKIH 109
Query: 195 LK 196
++
Sbjct: 110 MR 111
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 10/89 (11%)
Query: 118 KAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHI 167
K L T+ +E C C + ++T ++C C + ++ H+
Sbjct: 51 KGHLRTHTDEKPYRCEECGKHFGQPMNLRRHMKTHTGEKPYMCEECGRQFATLTTLKIHM 110
Query: 168 RTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RTHTGEKPY C +C + L H++
Sbjct: 111 RTHTGEKPYQCEECGRQFGKGTNLKRHMR 139
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 55/139 (39%), Gaps = 29/139 (20%)
Query: 79 CKHCHSQLSHLDLLD------------HCKTCSYMIRPNAN--------NTFSPF-CIYC 117
C+ C SQ S D L C+TC + P+ C C
Sbjct: 298 CEQCGSQFSSSDTLKRHMLTHTDERHYQCETCKRRFSQQGHLRTHMRTHTGEKPYRCEEC 357
Query: 118 KAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA 177
S L +L +H IRT + + C C+ + +++H++THTGEK Y
Sbjct: 358 GKRFSA-LGDLKKH-------IRTHTGQKPYRCEECNKHFSRLDSLKTHMQTHTGEKRYG 409
Query: 178 CGQCAFRSASVAGLHYHLK 196
C +C + + + L H+K
Sbjct: 410 CEECGKQFSLLMTLKAHMK 428
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C G + H+ THTGEKPY C +C + + + L H+K
Sbjct: 231 MRTHTGEKPYRCEECGKQFSQPGVLTRHMMTHTGEKPYRCEECGKQFSQLGNLKTHIK 288
>gi|260787823|ref|XP_002588951.1| hypothetical protein BRAFLDRAFT_125434 [Branchiostoma floridae]
gi|229274123|gb|EEN44962.1| hypothetical protein BRAFLDRAFT_125434 [Branchiostoma floridae]
Length = 275
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY CGQC + +A + L HL K
Sbjct: 112 YMCGECGYRTTYKPTLSRHMRTHTGEKPYKCGQCGYSAALKSNLDQHLAK 161
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KPY CG+C +R+ + L H++
Sbjct: 187 MRTHTGEKPYKCNQCDYSAAQKSTLNQHLARHTGDKPYMCGECGYRTTHKSNLAQHMR 244
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY CG+C +R+ L H++
Sbjct: 75 MRTHTGEKPYKCDQCDYSAAHKKSFDQHVARHTGEKPYMCGECGYRTTYKPTLSRHMR 132
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + +H+RTHTGEKPY C QC + +A + L+ HL +
Sbjct: 168 YMCGECGYRATQKCHLSNHMRTHTGEKPYKCNQCDYSAAQKSTLNQHLAR 217
Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + + H+RTHTGEKPY C +C + +A + L+ H K
Sbjct: 224 YMCGECGYRTTHKSNLAQHMRTHTGEKPYKCDECDYSAAVKSALNKHCK 272
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG KPY CG+C R+ + L H++
Sbjct: 19 MRTHTGEKPYRCDQCDYSAVAKSTLNRHLAKHTGNKPYMCGECGHRATQKSDLSIHMR 76
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C Y + + H+RTHTGEKPY C QC + + + + L+ HL K
Sbjct: 1 MCGECGYMTAKKCHLADHMRTHTGEKPYRCDQCDYSAVAKSTLNRHLAK 49
Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C Y + + H+ HTGEKPY CG+C +R+ L H++
Sbjct: 131 MRTHTGEKPYKCGQCGYSAALKSNLDQHLAKHTGEKPYMCGECGYRATQKCHLSNHMR 188
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H+RTHTGEKPY C QC + +A H+ +
Sbjct: 56 YMCGECGHRATQKSDLSIHMRTHTGEKPYKCDQCDYSAAHKKSFDQHVAR 105
>gi|260832566|ref|XP_002611228.1| hypothetical protein BRAFLDRAFT_71189 [Branchiostoma floridae]
gi|229296599|gb|EEN67238.1| hypothetical protein BRAFLDRAFT_71189 [Branchiostoma floridae]
Length = 323
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + + H+ HTG+KPY CG+C +R+A+ + L H+++
Sbjct: 198 YKCDQCDYSASQKCRLDQHMAQHTGDKPYMCGECGYRTAASSSLTVHMRR 247
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+F C CDY + + H R HTGEKPY C QC + +A L H+ K
Sbjct: 85 RFECTECDYRAATRTQLVIHTRKHTGEKPYKCDQCDYSAAQKGNLDQHMTK 135
Score = 43.5 bits (101), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+R H GEKPY C QC + A+ + L H+ K
Sbjct: 226 YMCGECGYRTAASSSLTVHMRRHIGEKPYKCDQCDYSGATKSNLDQHMAK 275
Score = 43.5 bits (101), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F C CD+ + G + H+ HTGEKPY C QC + ++ L H+
Sbjct: 170 FKCDQCDFTASWKGNLDQHMAKHTGEKPYKCDQCDYSASQKCRLDQHM 217
Score = 43.1 bits (100), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + G + H+ H GEK Y C +C FR+A + L H+K+
Sbjct: 114 YKCDQCDYSAAQKGNLDQHMTKHNGEKLYKCEECGFRAAYRSTLIIHMKR 163
Score = 42.4 bits (98), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 25/50 (50%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C CDY + H+ H +K Y CG+C FR+A L H++K
Sbjct: 254 YKCDQCDYSGATKSNLDQHMAKHAEDKRYVCGECGFRTAHRGALKRHMRK 303
>gi|260837236|ref|XP_002613611.1| hypothetical protein BRAFLDRAFT_93654 [Branchiostoma floridae]
gi|229298997|gb|EEN69620.1| hypothetical protein BRAFLDRAFT_93654 [Branchiostoma floridae]
Length = 581
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 62/162 (38%), Gaps = 31/162 (19%)
Query: 57 QILNLNLSVLLVTTIPTQNHSLCKHCHSQLSHLDLLD------------HCKTCSYMIRP 104
Q L+ + + T + H C+ C Q S L L C+ CS R
Sbjct: 222 QFSRLSSLKIHMRTHTGEKHYRCEECSRQFSQLGNLKTHMRTHTGEKPFRCEECSKKFRD 281
Query: 105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACD 154
+ K + T+ E C C KS +R+ + C C
Sbjct: 282 QGD---------LKKHMRTHTGEKPYRCEKCGKQFSWLGHLKSHMRSHTGEKPYRCEECS 332
Query: 155 YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ +RSH+RTHTGEKPY C +C + + + L+ HL+
Sbjct: 333 KQFSRLEHLRSHMRTHTGEKPYRCEECGKQFSELHHLNTHLR 374
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 134 TCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHY 193
T K+ IRT F C C +G ++ H+RTHTGEKP+ C +C+ + + +A L
Sbjct: 396 TLKTHIRTHTGEKPFRCEECSKQFSQLGNLKKHMRTHTGEKPFKCEECSRQFSLLANLES 455
Query: 194 HLK 196
H++
Sbjct: 456 HMR 458
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C+ Q S LD L ++M + C C S L L K+
Sbjct: 48 CEECNRQFSRLDNLK-----THMRTHTGEKPYK--CEECSKQFS-QLGNL-------KTQ 92
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ T +++C C+ G ++ H+ THTGEKPY C +C+ + + GL H+
Sbjct: 93 METHTGERRYMCEECNKHFSTQGYLKKHMHTHTGEKPYKCQECSKQFRLLTGLKTHM 149
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+S +RT F C C + +H+RTHTGEKPY C +C+ + + ++ L H+
Sbjct: 454 ESHMRTHTGEKPFRCEECSRQFSERHQLNTHLRTHTGEKPYKCQECSKQFSQLSNLKSHM 513
Query: 196 K 196
+
Sbjct: 514 Q 514
Score = 39.7 bits (91), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT F C C + + SH+RTHTGEKP+ C +C+ + + L+ HL
Sbjct: 426 KKHMRTHTGEKPFKCEECSRQFSLLANLESHMRTHTGEKPFRCEECSRQFSERHQLNTHL 485
Query: 196 K 196
+
Sbjct: 486 R 486
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 24/33 (72%)
Query: 163 MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+++H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 539 LKTHMRTHTGEKPYKCEECSRQFSQLGHLKSHM 571
Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C + ++ H+RTHTGEK Y C +C+ + + + L H++
Sbjct: 214 FKCEECSKQFSRLSSLKIHMRTHTGEKHYRCEECSRQFSQLGNLKTHMR 262
>gi|440898059|gb|ELR49633.1| Zinc finger protein 711 [Bos grunniens mutus]
Length = 806
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
VC C + ++ H+RTHTGEKPY C C FR A + L H+K +
Sbjct: 551 VCVECGKGFRHPSELKKHMRTHTGEKPYQCQYCVFRCADQSNLKTHIKSKH 601
>gi|410988945|ref|XP_004000734.1| PREDICTED: zinc finger protein 711 isoform 2 [Felis catus]
Length = 812
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
VC C + ++ H+RTHTGEKPY C C FR A + L H+K +
Sbjct: 557 VCVECGKGFRHPSELKKHMRTHTGEKPYQCQYCVFRCADQSNLKTHIKSKH 607
>gi|260806372|ref|XP_002598058.1| hypothetical protein BRAFLDRAFT_108631 [Branchiostoma floridae]
gi|229283329|gb|EEN54070.1| hypothetical protein BRAFLDRAFT_108631 [Branchiostoma floridae]
Length = 706
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F+C C Y + + H+RTHTGEKPY C QC F + + L YHL
Sbjct: 254 FMCGECGYRATQKYILTQHMRTHTGEKPYKCDQCDFTTVRKSSLDYHL 301
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CD+ + + H+ HTG+KPY CG+C +R+A A L HL+
Sbjct: 273 MRTHTGEKPYKCDQCDFTTVRKSSLDYHLMIHTGDKPYTCGECGYRTAHKAHLSQHLR 330
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 148 FVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + G + HI HTGEKPY C +C +R+A + L H+K
Sbjct: 595 YKCEQCDYSAVRKGTLDKHIAAKHTGEKPYMCWECGYRAAYKSSLSLHMK 644
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C+ C Y + + H++THTG+KPY C QC F SA A L H++
Sbjct: 624 YMCWECGYRAAYKSSLSLHMKTHTGQKPYKCDQCDFSSAHKANLIRHIE 672
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRS 185
+F C CDY + G + +H+ + HTGEKPY CG+C +R+
Sbjct: 481 RFKCDQCDYSAAQKGTLDNHMASNHTGEKPYMCGECGYRT 520
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C + + + + H+RTHTGEKPY C QC F +A L H+K
Sbjct: 141 YMCGECGFRTAHRSYISEHMRTHTGEKPYKCDQCDFSAACKPNLDTHVK 189
Score = 42.7 bits (99), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+R HTGEKPY C QC + +A + L +H+
Sbjct: 425 YMCEKCGYKTTQKCNLSQHMRIHTGEKPYKCKQCDYSAAGKSTLDFHI 472
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
++C C Y + + H+RTHTGEKPY C QC + +A
Sbjct: 55 YMCGECGYRTTQKSELSRHMRTHTGEKPYKCDQCDYSAA 93
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHI-RTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + C CDY + + SH+ R HT EKPY C QC + +A A L YH+
Sbjct: 329 LRTHTEEKPYKCDQCDYSAARKSHLDSHVARKHTDEKPYKCKQCDYSAALKAVLDYHI 386
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + + H+R+HTGEKPY C QC + +A + L H K
Sbjct: 198 YMCGECGYRTIHKYQLTEHMRSHTGEKPYKCDQCDYSAARKSTLAKHKAK 247
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ THT +KP+ CG+C +R+ A L H +
Sbjct: 530 MRTHTGEKPYKCDHCDYSATQSSALARHLVTHTSDKPFKCGECEYRTGHKAYLSRHRR 587
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
++T + + C CD+ S + + HI HTG+KPY CG+C +R+A L H++
Sbjct: 643 MKTHTGQKPYKCDQCDFSSAHKANLIRHIEAKHTGDKPYMCGECGYRTAQKFNLSRHMR 701
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+ C C Y + + + H+RTHT EKPY C QC + +A + L H+ + +
Sbjct: 310 YTCGECGYRTAHKAHLSQHLRTHTEEKPYKCDQCDYSAARKSHLDSHVARKH 361
Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 148 FVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + +HI H+GEKPY CG+C FR+A + + H++
Sbjct: 112 YKCNQCDYSAVQKVHLDNHIAAKHSGEKPYMCGECGFRTAHRSYISEHMR 161
Score = 39.3 bits (90), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGEKPY C C + + + L HL
Sbjct: 511 YMCGECGYRTTLKTYLSQHMRTHTGEKPYKCDHCDYSATQSSALARHL 558
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 127 ELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
+L EH R S P++ C CDY + + H H+G+KP+ CG+C +R+
Sbjct: 212 QLTEHMR---SHTGEKPYK----CDQCDYSAARKSTLAKHKAKHSGDKPFMCGECGYRA 263
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
F C C+Y + + + H R HTGE PY C QC + + L H+
Sbjct: 567 FKCGECEYRTGHKAYLSRHRRIHTGENPYKCEQCDYSAVRKGTLDKHI 614
Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 11/94 (11%)
Query: 105 NANNTFS-PF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGC 162
N NNT P+ C C +T +EL H +RT + C CDY +
Sbjct: 46 NLNNTGEKPYMCGEC-GYRTTQKSELSRH-------MRTHTGEKPYKCDQCDYSAAQKII 97
Query: 163 MRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHL 195
+ +HI H+GEKPY C QC + + L H+
Sbjct: 98 LDNHIAAKHSGEKPYKCNQCDYSAVQKVHLDNHI 131
Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRS 185
+RT + C CD+ + + +H++ HTG+KPY CG+C +R+
Sbjct: 160 MRTHTGEKPYKCDQCDFSAACKPNLDTHVKAKHTGDKPYMCGECGYRT 207
>gi|260808999|ref|XP_002599294.1| hypothetical protein BRAFLDRAFT_64349 [Branchiostoma floridae]
gi|229284571|gb|EEN55306.1| hypothetical protein BRAFLDRAFT_64349 [Branchiostoma floridae]
Length = 335
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT F C CDY + + +H+ HTG+KPY CG+C FR+ + L H+
Sbjct: 132 MRTHTGEKPFKCDQCDYAAAQKCQLDAHLTKHTGDKPYMCGECGFRTTAKRDLSRHM 188
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + M H+RTHTGE+PY C QC + +A L HL K
Sbjct: 281 YMCGECGYRTNRKDDMSIHMRTHTGERPYKCDQCDYSAARKCHLKTHLAK 330
Score = 43.1 bits (100), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H++ HT E PY C +C R+A+ GL H++
Sbjct: 197 YTCDQCDYSAIRKSSLDRHLKKHTDENPYMCWECGHRAATRMGLTTHMR 245
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H+ HTG KPY CG+C +R+ + H++
Sbjct: 253 YKCDQCDYSAPKKSRLDRHLAKHTGWKPYMCGECGYRTNRKDDMSIHMR 301
Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C+ C + + + +H+RTHTGEK Y C QC + + + L HL K
Sbjct: 225 YMCWECGHRAATRMGLTTHMRTHTGEKCYKCDQCDYSAPKKSRLDRHLAK 274
Score = 39.3 bits (90), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 21/32 (65%)
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
H+RTHTGEKP+ C QC + +A L HL K
Sbjct: 131 HMRTHTGEKPFKCDQCDYAAAQKCQLDAHLTK 162
Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H+ THTG +PY C QC + + + L HLKK
Sbjct: 169 YMCGECGFRTTAKRDLSRHMSTHTGYRPYTCDQCDYSAIRKSSLDRHLKK 218
>gi|260795613|ref|XP_002592799.1| hypothetical protein BRAFLDRAFT_65381 [Branchiostoma floridae]
gi|229278023|gb|EEN48810.1| hypothetical protein BRAFLDRAFT_65381 [Branchiostoma floridae]
Length = 583
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
S +R+ ++ C C+ +G +++H+RTHTGEKPY C +C+ + + V L H++
Sbjct: 157 SSVRSVREEKRYKCEECNKQFSQLGGLKAHVRTHTGEKPYRCEECSRQFSQVGHLKSHMQ 216
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 17/119 (14%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKS 137
C+ C Q S L L+ I ++ PF C C S ++ L H RT
Sbjct: 226 CEKCSKQFSQLGHLN--------IHMRSHTGEKPFRCEECSKQFS-RMDTLKTHMRT--- 273
Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C C ++G ++ H+RTHTGEKPY C +C+ + + ++ L H++
Sbjct: 274 HTGERPYR----CEECSRQFSHLGTLKKHMRTHTGEKPYRCEECSKQFSQLSNLKKHVR 328
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 13/131 (9%)
Query: 79 CKHCHSQLSHLD-LLDHCKTCSYMIRPNANNTFSPFCIYCK--AVLSTNLNELIEHCRTC 135
C+ C SQ S LD L H +T + F + C + + T+ + + C C
Sbjct: 450 CEECSSQFSQLDHLKKHMRTHTGEKPYRCEECSRQFSVLCNLHSHMRTHTGDKLFKCEEC 509
Query: 136 ----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
K +RT + C C +G +++H+RTHTGEKPY C +C+ +
Sbjct: 510 NRQFSLLENLKRHMRTHTGEKPYRCEECSRQFSELGTLKTHMRTHTGEKPYKCEECSKQF 569
Query: 186 ASVAGLHYHLK 196
+ L H++
Sbjct: 570 SRQYRLKKHME 580
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT ++C C +G ++ H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 60 KTHMRTHTGEKPYMCEECSRQFNELGHLKRHMRTHTGEKPYGCEKCSKQFSQLGHLKAHM 119
Query: 196 K 196
+
Sbjct: 120 R 120
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C +G ++SH++THTGEKPY C +C+ + + + L+ H+
Sbjct: 184 KAHVRTHTGEKPYRCEECSRQFSQVGHLKSHMQTHTGEKPYRCEKCSKQFSQLGHLNIHM 243
Query: 196 K 196
+
Sbjct: 244 R 244
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C Q S +D L ++M + C C S +L L +H RT
Sbjct: 254 CEECSKQFSRMDTLK-----THMRTHTGERPYR--CEECSRQFS-HLGTLKKHMRT---H 302
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C C + ++ H+RTHTGEKPY C +C+ + + ++ L H++
Sbjct: 303 TGEKPYR----CEECSKQFSQLSNLKKHVRTHTGEKPYRCEECSKQFSQLSNLKKHVR 356
Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C + ++ H+RTHTGEKPY C +C+ + + + LH H+
Sbjct: 436 KRHVRTHTGEKPYTCEECSSQFSQLDHLKKHMRTHTGEKPYRCEECSRQFSVLCNLHSHM 495
Query: 196 K 196
+
Sbjct: 496 R 496
Score = 43.5 bits (101), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 49/124 (39%), Gaps = 29/124 (23%)
Query: 79 CKHCHSQLSHLDLLD------------HCKTCSYMIRPNAN--------NTFSPF-CIYC 117
C+ C Q SHL L C+ CS +N P+ C C
Sbjct: 282 CEECSRQFSHLGTLKKHMRTHTGEKPYRCEECSKQFSQLSNLKKHVRTHTGEKPYRCEEC 341
Query: 118 KAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA 177
S L+ L +H RT P+R C C +G ++ H+RTHTGEKPY
Sbjct: 342 SKQFS-QLSNLKKHVRT---HTGEKPYR----CEECSKQFSRLGHLKGHMRTHTGEKPYR 393
Query: 178 CGQC 181
C +C
Sbjct: 394 CEEC 397
Score = 43.1 bits (100), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ R P++ C C +G +++H+RTHTGEKPY C +C+ + + L H++
Sbjct: 37 GLTREKPYK----CEECSRQFSQLGNLKTHMRTHTGEKPYMCEECSRQFNELGHLKRHMR 92
Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Query: 118 KAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHI 167
KA + T+ E C C KS ++T + C C +G + H+
Sbjct: 184 KAHVRTHTGEKPYRCEECSRQFSQVGHLKSHMQTHTGEKPYRCEKCSKQFSQLGHLNIHM 243
Query: 168 RTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R+HTGEKP+ C +C+ + + + L H++
Sbjct: 244 RSHTGEKPFRCEECSKQFSRMDTLKTHMR 272
>gi|426392244|ref|XP_004062466.1| PREDICTED: transcriptional repressor CTCFL isoform 2 [Gorilla
gorilla gorilla]
Length = 666
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 324 TSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 383
Query: 190 GLHYHLK 196
L H++
Sbjct: 384 KLKRHMR 390
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H +T K+ R F C C Y M +HIRTHTGE
Sbjct: 460 CRYCSAVFHERYA-LIQHQKTHKNEKR-------FKCKHCSYACKQERHMTAHIRTHTGE 511
Query: 174 KPYACGQCA--FRSASVAGLHYHLKKTYH 200
KP+ C C FR + H+ + YH
Sbjct: 512 KPFTCLFCNKCFRQKQLLNAHF---RKYH 537
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +R+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 358 KRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEKPYECHICHTRFTQSGTMKIHI 417
>gi|74007868|ref|XP_860957.1| PREDICTED: zinc finger protein 711 isoform 5 [Canis lupus
familiaris]
Length = 812
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
VC C + ++ H+RTHTGEKPY C C FR A + L H+K +
Sbjct: 557 VCVECGKGFRHPSELKKHMRTHTGEKPYQCQYCVFRCADQSNLKTHIKSKH 607
>gi|260795619|ref|XP_002592802.1| hypothetical protein BRAFLDRAFT_65384 [Branchiostoma floridae]
gi|229278026|gb|EEN48813.1| hypothetical protein BRAFLDRAFT_65384 [Branchiostoma floridae]
Length = 259
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C +G ++ HIRTHTGEKPY C +C+ + + L H+
Sbjct: 192 KTHMRTHTGEKPYKCEECSRQFSELGALKRHIRTHTGEKPYKCEECSRQFNELGNLKKHM 251
Query: 196 K 196
+
Sbjct: 252 R 252
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C +G +++H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 164 KKHMRTHTGEKPYNCEKCSRQFNELGALKTHMRTHTGEKPYKCEECSRQFSELGALKRHI 223
Query: 196 K 196
+
Sbjct: 224 R 224
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 10/78 (12%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C C S L++L +H RT P+R C C +G ++ H+RTHTGE
Sbjct: 34 CEECNKQFS-QLDDLKKHMRT---HTGEKPYR----CEECSRQFSQLGHLKKHMRTHTGE 85
Query: 174 KPYACGQCA--FRSASVA 189
KPY C +C+ F+SA +
Sbjct: 86 KPYRCEECSMQFQSAGCS 103
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
R + + + C C G ++SH+RTHT EKPY C +C+ + + + L H++
Sbjct: 112 RGETLQKPYKCEECSRQFSQPGSLKSHMRTHTAEKPYRCEECSRQFSQLCNLKKHMR 168
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C+ + ++ H+RTHTGEKPY C +C+ + + + L H++
Sbjct: 32 YQCEECNKQFSQLDDLKKHMRTHTGEKPYRCEECSRQFSQLGHLKKHMR 80
>gi|354502879|ref|XP_003513509.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 711-like
[Cricetulus griseus]
Length = 805
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
VC C + ++ H+RTHTGEKPY C C FR A + L H+K +
Sbjct: 550 VCVECGKGFRHPSELKKHMRTHTGEKPYQCQYCVFRCADQSNLKTHIKSKH 600
>gi|301776372|ref|XP_002923613.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 77-like
[Ailuropoda melanoleuca]
Length = 691
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C+ + G +R H+RTHTGE+PY C QC +GL H++
Sbjct: 326 VRTHTGERPYECPQCEKTFTDGGNLREHVRTHTGERPYECQQCGKTFKYNSGLRAHMR 383
Score = 44.7 bits (104), Expect = 0.021, Method: Composition-based stats.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 17/133 (12%)
Query: 79 CKHCHSQLS-HLDLLDHCKTCSYMIRP----NANNTFSPFCIYCKAVLSTNLNELIEHCR 133
C+HC + H LL H +T + RP TF C + L+T+ C+
Sbjct: 393 CQHCGKAFTGHYSLLVHVRTHTGE-RPYECVECGKTFRK-CEHFTRHLTTHSTVKPFECK 450
Query: 134 TC------KSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
C ++ +R RH + C+ C ++G ++ H+RTHTGE+PY C C
Sbjct: 451 ECDRAFRDRTDLRIHMRRHTGERPYECHQCGKSFIHLGNLQGHVRTHTGERPYQCEHCGK 510
Query: 184 RSASVAGLHYHLK 196
+ L H++
Sbjct: 511 TFRYNSDLREHMR 523
Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 131 HCRTCKSMIRTDPFRHKFVCYAC-DYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
H + +RT + C C F YN +R H+RTHTGE+PY C QC
Sbjct: 486 HLGNLQGHVRTHTGERPYQCEHCGKTFRYNSD-LREHMRTHTGERPYKCPQCG 537
Score = 40.0 bits (92), Expect = 0.48, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 136 KSMIRTDPFRHKFVCYAC-DYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
+ +RT + C C F YN G +R+H+R H GE+PY C C
Sbjct: 351 REHVRTHTGERPYECQQCGKTFKYNSG-LRAHMRAHNGERPYKCQHCG 397
Score = 36.6 bits (83), Expect = 5.4, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 25/58 (43%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+R + F C C + H+RTHTGE+PY C QC L H++
Sbjct: 298 VRAHSGKRIFGCGQCGKAFSRQAYLLVHVRTHTGERPYECPQCEKTFTDGGNLREHVR 355
>gi|260823158|ref|XP_002604050.1| hypothetical protein BRAFLDRAFT_71660 [Branchiostoma floridae]
gi|229289375|gb|EEN60061.1| hypothetical protein BRAFLDRAFT_71660 [Branchiostoma floridae]
Length = 328
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CDY + + HI HTGEKPY CG+C +R+A + L H++
Sbjct: 170 MRTHTGEKPFKCDQCDYSAALKSHLNEHIARHTGEKPYMCGECGYRTAKKSRLAIHMR 227
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C CDY + + H++ H+GEKP+ CG+C +R+A + L H++
Sbjct: 123 YKCDHCDYSAARKSSLDEHLQIHSGEKPFMCGECGYRTAKKSRLARHMR 171
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 41/87 (47%), Gaps = 13/87 (14%)
Query: 112 PF-CIYCK--AVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIR 168
PF C C A L ++LNE I P+ +C C Y + + H+R
Sbjct: 178 PFKCDQCDYSAALKSHLNEHIA------RHTGEKPY----MCGECGYRTAKKSRLAIHMR 227
Query: 169 THTGEKPYACGQCAFRSASVAGLHYHL 195
THTGEKPY C QC + +A + L HL
Sbjct: 228 THTGEKPYKCDQCEYAAAEKSALTRHL 254
Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C + + + + H+RTHT EKPY C QC + +A +GL H +K
Sbjct: 263 FTCGECGFKTDSNSHLSRHMRTHTREKPYKCDQCDYSAAQKSGLDGHKRK 312
Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHI-RTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RT F C CDY + ++ H+ R H G+KPY CG+C +R+A L H+ K
Sbjct: 57 MRTHTGEKPFKCDQCDYSTILKSYLKRHVSRQHNGDKPYMCGECGYRAARKDKLSQHMTK 116
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 111 SPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRT 169
+PF C C +N + L H RT R P++ C CDY + + H R
Sbjct: 261 NPFTCGECGFKTDSN-SHLSRHMRT---HTREKPYK----CDQCDYSAAQKSGLDGHKRK 312
Query: 170 HTGEKPYACGQCAFRS 185
HTGEK + CG+C FR+
Sbjct: 313 HTGEKLFVCGECGFRA 328
Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
+RT F C CDY + + H HTGE PY CG+C +R+
Sbjct: 1 MRTHTGEKPFKCDQCDYSAARKSSLEQHKTKHTGEYPYMCGECEYRT 47
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF 183
++C C+Y + H+RTHTGEKP+ C QC +
Sbjct: 38 YMCGECEYRTLRKSHFSDHMRTHTGEKPFKCDQCDY 73
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C Y + + H+ HTGE+PY C C + +A + L HL+
Sbjct: 95 YMCGECGYRAARKDKLSQHMTKHTGERPYKCDHCDYSAARKSSLDEHLQ 143
Score = 35.8 bits (81), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 167 IRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+RTHTGEKP+ C QC + +A + L H K
Sbjct: 1 MRTHTGEKPFKCDQCDYSAARKSSLEQHKTK 31
>gi|291407960|ref|XP_002720193.1| PREDICTED: zinc finger protein 711 isoform 1 [Oryctolagus
cuniculus]
Length = 804
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
VC C + ++ H+RTHTGEKPY C C FR A + L H+K +
Sbjct: 548 VCVECGKGFRHPSELKKHMRTHTGEKPYQCQYCVFRCADQSNLKTHIKSKH 598
>gi|260782845|ref|XP_002586491.1| hypothetical protein BRAFLDRAFT_213815 [Branchiostoma floridae]
gi|229271605|gb|EEN42502.1| hypothetical protein BRAFLDRAFT_213815 [Branchiostoma floridae]
Length = 262
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 60/161 (37%), Gaps = 27/161 (16%)
Query: 56 DQILNLNLSVLLVTTIPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCI 115
Q + L + T + C+ C+ Q SHLD L ++M F C
Sbjct: 73 KQFIQLGELKKHIRTHTGEKPYKCEVCNRQFSHLDALK-----THMRTHTGEKPFR--CE 125
Query: 116 YC----------KAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDY 155
C K + T+ E C C K +RT F C C
Sbjct: 126 ECSIQFSRLGNLKRHMRTHTREKPYKCEECSRQFSELGTLKKHMRTHTGEKPFTCEVCSK 185
Query: 156 FSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+G ++ IRTHTGEKP+ C +C+ + + L H++
Sbjct: 186 QYSQLGALKRQIRTHTGEKPFKCEECSKQFSQPGDLKRHMR 226
>gi|351699229|gb|EHB02148.1| Zinc finger protein 711 [Heterocephalus glaber]
Length = 819
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
VC C + ++ H+RTHTGEKPY C C FR A + L H+K +
Sbjct: 564 VCVECGKGFRHPSELKKHMRTHTGEKPYQCQYCVFRCADQSNLKTHIKSKH 614
>gi|301619181|ref|XP_002938981.1| PREDICTED: zinc finger protein 827-like [Xenopus (Silurana)
tropicalis]
Length = 1286
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 44/106 (41%), Gaps = 26/106 (24%)
Query: 112 PFCIYCKAVLSTNLNELIE-----------HCRTCKSM----------IRTDPFRHKFVC 150
PFCIY STN +E CR CK++ +R + + C
Sbjct: 1067 PFCIY-----STNRPAAMECHLKTHYKMEYKCRICKTVKANQLELEMHVRGHRLGNHYKC 1121
Query: 151 YACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
C Y S + H+R HTGE+P+ C QC++ L+ H K
Sbjct: 1122 DQCGYLSKTANKLIEHVRVHTGERPFHCDQCSYSCKRKDNLNLHKK 1167
>gi|221043226|dbj|BAH13290.1| unnamed protein product [Homo sapiens]
Length = 986
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F C C+ +++H+R HT EKPY C QC++ SA A L+ HL+K
Sbjct: 14 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRK 63
Score = 39.3 bits (90), Expect = 0.98, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC N++ + + ++ +R + C C Y S + H+R HTGE
Sbjct: 16 CEYC--------NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGE 67
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTY 199
K +AC C+F S L H+++ +
Sbjct: 68 K-FACDYCSFTCLSKGHLKVHIERVH 92
Score = 36.2 bits (82), Expect = 7.8, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C CD YF N ++ HI H G KP+ C C + + S + L H+ +
Sbjct: 625 CPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR 673
Score = 36.2 bits (82), Expect = 8.5, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 20/116 (17%)
Query: 95 CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC------KSMIRTDPFRH-- 146
C C Y R +N KA ++ + E C C K +++ H
Sbjct: 654 CSLCEYATRSKSN---------LKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTA 704
Query: 147 ---KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
+F C CDY + + H+ H KP+ C C + L H + +
Sbjct: 705 DGKQFKCTVCDYTAAQKPQLLRHMEQHVSFKPFRCAHCHYSCNISGSLKRHYNRKH 760
>gi|193083073|ref|NP_001122369.1| zinc finger protein ZF(C2H2)-151 [Ciona intestinalis]
gi|93003288|tpd|FAA00227.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 615
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 143 PFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
P ++ C CD ++ H+ THTGEKPYAC +C++R A+++ L+ H+
Sbjct: 334 PKTQQYPCPLCDKVYTKKFSIKLHMLTHTGEKPYACDRCSWRFANLSRLNRHM 386
>gi|27762109|gb|AAL61541.1| zinc finger protein CTCF-T [Homo sapiens]
Length = 662
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 324 TSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 383
Query: 190 GLHYHLK 196
L H++
Sbjct: 384 KLKRHMR 390
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H +T K+ R F C C Y M +HIRTHTGE
Sbjct: 460 CRYCSAVFHERYA-LIQHQKTHKNEKR-------FKCKHCSYACKQERHMTAHIRTHTGE 511
Query: 174 KPYACGQCA--FRSASVAGLHYHLKKTYH 200
KP+ C C FR + H+ + YH
Sbjct: 512 KPFTCLSCNKCFRQKQLLNAHF---RKYH 537
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +R+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 358 KRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEKPYECHICHTRFTQSGTMKIHI 417
>gi|260822711|ref|XP_002606745.1| hypothetical protein BRAFLDRAFT_226054 [Branchiostoma floridae]
gi|229292089|gb|EEN62755.1| hypothetical protein BRAFLDRAFT_226054 [Branchiostoma floridae]
Length = 372
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 11/100 (11%)
Query: 107 NNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYF 156
N FS C + K T+ E C C K+ +RT + C C
Sbjct: 203 NRQFSQLC-HLKEHTRTHTGEKPYKCEKCSRQFSVLGNLKTHMRTHTGEKPYRCEGCSRQ 261
Query: 157 SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
G ++ H+RTHTGEKPY C +C + +++A L H++
Sbjct: 262 FSEQGNLKVHMRTHTGEKPYKCDECGMQFSTLANLKRHMR 301
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
KS +RT + C C + ++ HIRTHTGEKPY C +C+ + + ++ L H+
Sbjct: 101 KSHMRTHTGEKSYKCEECSKQFSQLVHLKKHIRTHTGEKPYRCDECSRQFSQLSDLKRHM 160
Query: 196 K 196
+
Sbjct: 161 R 161
Score = 42.7 bits (99), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 17/134 (12%)
Query: 78 LCKHCHSQLSHL-DLLDHCKTCSYMIRP----NANNTFSPFCIYCKAVLSTNLNELIEHC 132
+C+ C Q S L L H +T +P + FS FC K+ + T+ E C
Sbjct: 58 MCEECSRQFSQLCHLQSHMRT-HTGEKPYKCEKCSRQFSEFCNL-KSHMRTHTGEKSYKC 115
Query: 133 RTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
C K IRT + C C + ++ H+RTHTG+KPY C +C+
Sbjct: 116 EECSKQFSQLVHLKKHIRTHTGEKPYRCDECSRQFSQLSDLKRHMRTHTGDKPYGCEECS 175
Query: 183 FRSASVAGLHYHLK 196
+ + L H++
Sbjct: 176 KQFRRRSHLKRHMR 189
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IRT + C C +G +++H+RTHTGEKP+ C +C+ + + + L H+
Sbjct: 17 KRHIRTHTGEKPYRCEECSRQFSLLGHLKAHMRTHTGEKPFMCEECSRQFSQLCHLQSHM 76
Query: 196 K 196
+
Sbjct: 77 R 77
Score = 39.3 bits (90), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C+ + ++ HIRTHTGEKPY C +C+ + + + L H++
Sbjct: 1 YRCEECNKQFSKLSDLKRHIRTHTGEKPYRCEECSRQFSLLGHLKAHMR 49
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
K+ ++T + C C +G ++ H RTHTGEKPY C +C+
Sbjct: 325 KTHMQTHSGEKPYRCEECSRQFSVMGSLKEHKRTHTGEKPYKCEECS 371
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C + ++ H+RTHTGEKPY C +C+ + + + L H++
Sbjct: 272 MRTHTGEKPYKCDECGMQFSTLANLKRHMRTHTGEKPYRCEECSRQFSRLDDLKTHMQ 329
Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAG 190
K +RT + C C + +++H++TH+GEKPY C +C+ R SV G
Sbjct: 297 KRHMRTHTGEKPYRCEECSRQFSRLDDLKTHMQTHSGEKPYRCEECS-RQFSVMG 350
>gi|449486468|ref|XP_004177137.1| PREDICTED: transcriptional repressor CTCFL [Taeniopygia guttata]
Length = 301
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 105 NANNTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCM 163
NA+ P C C A T EL H R ++ + PF+ C C+Y S M
Sbjct: 96 NAHTGNKPHKCSECDAAFVTR-GELSRHRRYKHTLEK--PFK----CTICEYSSVEASKM 148
Query: 164 RSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
R H+R+HTGE+PY C C++ S L H+
Sbjct: 149 RRHVRSHTGERPYPCHLCSYASKDAYQLKRHM 180
>gi|444731379|gb|ELW71733.1| Zinc finger protein 40 [Tupaia chinensis]
Length = 2078
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C+ + HIR+HTGE+PY C C F + + L+ H K H
Sbjct: 450 KYICEYCNRACAKPSVLLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAH 503
>gi|326668326|ref|XP_002663341.2| PREDICTED: zinc finger protein 79-like [Danio rerio]
Length = 513
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 27/57 (47%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RT + C C N G +RSH RTHTGE+PY C C R + L H +
Sbjct: 326 RTHTGERPYTCSTCGKSFTNGGNLRSHQRTHTGERPYGCSSCGKRFSGAGDLRTHQR 382
Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+S RT + C +C G +R+H RTHTGE+PY C C R + L H
Sbjct: 350 RSHQRTHTGERPYGCSSCGKRFSGAGDLRTHQRTHTGERPYHCQLCNKRFSQAGHLTIHR 409
Query: 196 K 196
+
Sbjct: 410 R 410
Score = 39.3 bits (90), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F+C C + G +R+H R HTGE+PY C C R + L H +
Sbjct: 278 FICGVCGKGYGHRGQLRTHRRLHTGERPYGCSVCGKRFNEQSQLKVHQR 326
>gi|148225961|ref|NP_001079854.1| PR domain containing 12 [Xenopus laevis]
gi|33416662|gb|AAH56019.1| MGC68944 protein [Xenopus laevis]
Length = 355
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+S +R FVC C+ +R+H+R HTGE+PY C C + +AGL H
Sbjct: 260 RSHMRIHTLDKPFVCRFCNRRFSQSSTLRNHVRLHTGERPYKCQVCQSAYSQLAGLRAHQ 319
Query: 196 KKTYH 200
K H
Sbjct: 320 KSARH 324
>gi|29570785|ref|NP_542185.2| transcriptional repressor CTCFL isoform 1 [Homo sapiens]
gi|392933920|ref|NP_001255969.1| transcriptional repressor CTCFL isoform 1 [Homo sapiens]
gi|392933923|ref|NP_001255970.1| transcriptional repressor CTCFL isoform 1 [Homo sapiens]
gi|313104098|sp|Q8NI51.2|CTCFL_HUMAN RecName: Full=Transcriptional repressor CTCFL; AltName:
Full=Brother of the regulator of imprinted sites;
AltName: Full=CCCTC-binding factor; AltName: Full=CTCF
paralog; AltName: Full=CTCF-like protein; AltName:
Full=Cancer/testis antigen 27; Short=CT27; AltName:
Full=Zinc finger protein CTCF-T
Length = 663
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 324 TSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 383
Query: 190 GLHYHLK 196
L H++
Sbjct: 384 KLKRHMR 390
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H +T K+ R F C C Y M +HIRTHTGE
Sbjct: 460 CRYCSAVFHERYA-LIQHQKTHKNEKR-------FKCKHCSYACKQERHMTAHIRTHTGE 511
Query: 174 KPYACGQCA--FRSASVAGLHYHLKKTYH 200
KP+ C C FR + H+ + YH
Sbjct: 512 KPFTCLSCNKCFRQKQLLNAHF---RKYH 537
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +R+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 358 KRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEKPYECHICHTRFTQSGTMKIHI 417
>gi|20805280|gb|AAM28645.1|AF336042_1 nuclear DNA binding factor [Homo sapiens]
gi|111550136|gb|ABH10090.1| BORIS transcription factor transcript variant A1 [Homo sapiens]
gi|111550138|gb|ABH10091.1| BORIS transcription factor transcript variant A2 [Homo sapiens]
gi|111550140|gb|ABH10092.1| BORIS transcription factor transcript variant C1 [Homo sapiens]
gi|119595924|gb|EAW75518.1| CCCTC-binding factor (zinc finger protein)-like, isoform CRA_c
[Homo sapiens]
gi|120660394|gb|AAI30487.1| CCCTC-binding factor (zinc finger protein)-like [Homo sapiens]
gi|193785568|dbj|BAG54626.1| unnamed protein product [Homo sapiens]
Length = 663
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 324 TSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 383
Query: 190 GLHYHLK 196
L H++
Sbjct: 384 KLKRHMR 390
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H +T K+ R F C C Y M +HIRTHTGE
Sbjct: 460 CRYCSAVFHERYA-LIQHQKTHKNEKR-------FKCKHCSYACKQERHMTAHIRTHTGE 511
Query: 174 KPYACGQCA--FRSASVAGLHYHLKKTYH 200
KP+ C C FR + H+ + YH
Sbjct: 512 KPFTCLSCNKCFRQKQLLNAHF---RKYH 537
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +R+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 358 KRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEKPYECHICHTRFTQSGTMKIHI 417
>gi|260821736|ref|XP_002606259.1| hypothetical protein BRAFLDRAFT_83989 [Branchiostoma floridae]
gi|229291600|gb|EEN62269.1| hypothetical protein BRAFLDRAFT_83989 [Branchiostoma floridae]
Length = 803
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C+ C+Y + ++ H+R HTGEKPY CG+C +R+ + L H+K
Sbjct: 264 YKCHQCNYATIGSFQLKEHLRKHTGEKPYMCGECGYRTNFRSSLTIHIK 312
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C C+Y + +RSH+R H EKPY CGQC FR+ + L H+K+
Sbjct: 641 CDQCEYAAVCKSSIRSHMRKHADEKPYMCGQCDFRTKFRSNLTTHMKR 688
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 130 EHCRTCKSMIRTDPFRHK----FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS 185
E+ CKS IR+ +H ++C CD+ + + +H++ HTGEKP+ C QC F +
Sbjct: 645 EYAAVCKSSIRSHMRKHADEKPYMCGQCDFRTKFRSNLTTHMKRHTGEKPHKCNQCDFAA 704
Query: 186 ASVAGLHYHLKK 197
A L H+ K
Sbjct: 705 VQKAHLDLHMAK 716
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
C C+Y + +RSH+ HTGEKPY CG+C +R+ + L H+K+
Sbjct: 753 CDQCEYAAVCKSNLRSHMLKHTGEKPYMCGECGYRTNFRSNLATHMKR 800
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++T + C C+Y + + H+ H+GEKPY C +C FR+A + L H+K+
Sbjct: 367 LKTHSKEKPYKCNQCEYSTVLSANLAQHMIKHSGEKPYMCSECGFRTAYQSNLSAHMKR 425
Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 143 PFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
P+R C C+Y + + H+R HTGEKPY C QC + + L HL+K
Sbjct: 235 PYR----CQKCEYRTAVKSSLTKHLRIHTGEKPYKCHQCNYATIGSFQLKEHLRK 285
Score = 39.7 bits (91), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++ C C + ++ + + H++TH+ EKPY C QC + + A L H+
Sbjct: 347 RYECDTCGHRAFTLAALSHHLKTHSKEKPYKCNQCEYSTVLSANLAQHM 395
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
C CDY + G + H+ HTGE+ Y C C R+ + A L HLK
Sbjct: 98 CNMCDYAALKKGSLDLHMTKHTGERHYECDTCGHRAFTSADLSKHLK 144
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C+Y + + H+ HTGEKPY C +C F +A + + H+K+
Sbjct: 152 YKCDQCEYTTVLRASLAEHMLKHTGEKPYMCSECGFCTAYQSNMSAHMKR 201
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+ C C+Y + + H+ HTGEKPY C +C F +A + L H+K+
Sbjct: 40 YKCDQCEYSTVLRANLAQHMIKHTGEKPYMCSECGFCTAYQSNLSAHMKR 89
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
C CD+ + + H+ H+GEKPY+C C +R++S + H+K
Sbjct: 585 CNQCDFAAVQKAHLDLHMAKHSGEKPYSCEVCGYRASSRQHVSQHVK 631
Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
C CDY + + H+ HTGE+ Y C C R+ ++A L +HLK
Sbjct: 322 CNLCDYTALRKHSLVMHMTKHTGERRYECDTCGHRAFTLAALSHHLK 368
Score = 36.2 bits (82), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 26/47 (55%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
C CD+ + + H+ H+GEKPY+C C +R+ S + H+K
Sbjct: 697 CNQCDFAAVQKAHLDLHMAKHSGEKPYSCEVCGYRAYSRQHVSQHVK 743
Score = 36.2 bits (82), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C C Y +Y+ + H++ H+ EKP+ C QC + + + L H+
Sbjct: 723 YSCEVCGYRAYSRQHVSQHVKIHSKEKPHKCDQCEYAAVCKSNLRSHM 770
>gi|260814678|ref|XP_002602041.1| hypothetical protein BRAFLDRAFT_94458 [Branchiostoma floridae]
gi|229287346|gb|EEN58053.1| hypothetical protein BRAFLDRAFT_94458 [Branchiostoma floridae]
Length = 694
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C + C++ H+RTHTGEKPY+CG+C+ + + + L H++
Sbjct: 549 MRTHTGEKPYSCDECRRQFTELSCLKRHMRTHTGEKPYSCGECSRQFSQMGYLQNHMR 606
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++T F C C +G +R H+RTHTGEKPY C +C+ R S+ L H+K
Sbjct: 437 VKTHTGEKPFKCKECSKQFSMLGNLRVHMRTHTGEKPYTCEECSKRFRSMGCLQRHMK 494
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C ++GC++ H++THTGEKPY C +C+ + + + L H++
Sbjct: 465 MRTHTGEKPYTCEECSKRFRSMGCLQRHMKTHTGEKPYTCEECSRQFSQMGYLQNHMR 522
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++ +RT F C C+ +G +R H+RTHTGEKPY C +C+ + + L H+
Sbjct: 289 RAHMRTHSGEKPFKCKECNKQFSMLGNLRVHVRTHTGEKPYTCEECSKQFRGLGCLQRHM 348
Query: 196 K 196
K
Sbjct: 349 K 349
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C +G +++HIRTHTGEKPY C +C+ R + L H++
Sbjct: 10 FRCEECGKQFSELGNLKTHIRTHTGEKPYRCEECSKRFSRQDNLKTHMR 58
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
+RT + C C + C++ H+RTHTGEKPY+CG+C+
Sbjct: 633 MRTHTGEKPYSCDECRRQFTELSCLKRHMRTHTGEKPYSCGECS 676
Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 118 KAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA 177
+A + T+ E C C + F C C +G +R H+RTHTGEKPY+
Sbjct: 192 QAHMHTHTGEKPYRCEEC-----SKQFSRLVKCEECSKQFSRVGLLRGHMRTHTGEKPYS 246
Query: 178 CGQCAFRSASVAGLHYHLK 196
C +C + + + L H +
Sbjct: 247 CEECGKQFSELGNLKRHSR 265
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ +RT + C C +G ++ H RTHTGEKPY C +C+ + ++ L H+
Sbjct: 233 RGHMRTHTGEKPYSCEECGKQFSELGNLKRHSRTHTGEKPYKCEECSKQFSTSDSLRAHM 292
Query: 196 K 196
+
Sbjct: 293 R 293
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+ C C +G +++H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 148 YRCEECSKQFSQLGHLQTHMRTHTGEKPYRCEECSKQFSQLGHLQAHM 195
Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ IRT + C C +++H+RTHTGEKPY C +C+ + + ++ + H+
Sbjct: 26 KTHIRTHTGEKPYRCEECSKRFSRQDNLKTHMRTHTGEKPYRCEECSRQFSVLSNMRVHM 85
Query: 196 K 196
+
Sbjct: 86 R 86
Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 159 NIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+G ++ H+RTHTGEKPY C +C+ + + L H+
Sbjct: 103 QLGNLKVHVRTHTGEKPYRCEECSKQFGRLCHLQAHM 139
Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C + + H+RTHTGEKPY+C +C + ++ L H++
Sbjct: 605 MRTHTGEKPYKCEECSKQFRRLEHLTKHMRTHTGEKPYSCDECRRQFTELSCLKRHMR 662
Score = 36.6 bits (83), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 151 YACDYFSYNIG--C-MRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
Y C+ S G C +++H+ THTGEKPY C +C+ + + + L H++
Sbjct: 120 YRCEECSKQFGRLCHLQAHMHTHTGEKPYRCEECSKQFSQLGHLQTHMR 168
>gi|260789651|ref|XP_002589859.1| hypothetical protein BRAFLDRAFT_239175 [Branchiostoma floridae]
gi|229275043|gb|EEN45870.1| hypothetical protein BRAFLDRAFT_239175 [Branchiostoma floridae]
Length = 477
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
+ C C Y S C+ H +THTGEKPY C +C FRS+ + L H K+ YH
Sbjct: 333 YSCPECSYTSKRSSCVTRHRKTHTGEKPYLCDKCGFRSSDNSNLLKH-KQYYH 384
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 25/39 (64%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA 186
F C CDY + + H+RTHTGEKP+ CG C FR+A
Sbjct: 127 FKCNECDYGTGRRIDFKRHLRTHTGEKPFKCGMCDFRAA 165
Score = 39.7 bits (91), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 17/78 (21%)
Query: 137 SMIRTDPFRHK---------FVCYACD--------YFSYNIGCMRSHIRTHTGEKPYACG 179
SM +++ RHK + C CD Y ++ C+ H+ H+G KPY C
Sbjct: 222 SMKKSEITRHKVAVHTGKKPYSCLQCDFRTAYKINYSTHRKDCLVRHMIIHSGAKPYNCK 281
Query: 180 QCAFRSASVAGLHYHLKK 197
QC +R+A + L H++K
Sbjct: 282 QCEYRAADKSNLIKHIRK 299
>gi|403282647|ref|XP_003932753.1| PREDICTED: transcriptional repressor CTCFL [Saimiri boliviensis
boliviensis]
Length = 599
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 326 TSGELVRHRRYKHTHEKPFKCSMCTYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 385
Query: 190 GLHYHLK 196
L H++
Sbjct: 386 KLKRHMR 392
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H +T K+ R F C C Y M +HIR HTGE
Sbjct: 412 CRYCSAVFHERYA-LIQHQKTHKNEKR-------FKCEHCSYACKQARHMTAHIRIHTGE 463
Query: 174 KPYACGQCA--FRSASVAGLHYHLKKTYH 200
KP+ C C FR + +H+ + YH
Sbjct: 464 KPFTCLSCNKCFRQKQLLKVHF---RKYH 489
>gi|392933925|ref|NP_001255971.1| transcriptional repressor CTCFL isoform 2 [Homo sapiens]
Length = 662
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 324 TSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 383
Query: 190 GLHYHLK 196
L H++
Sbjct: 384 KLKRHMR 390
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H +T K+ R F C C Y M +HIRTHTGE
Sbjct: 460 CRYCSAVFHERYA-LIQHQKTHKNEKR-------FKCKHCSYACKQERHMTAHIRTHTGE 511
Query: 174 KPYACGQCA--FRSASVAGLHYHLKKTYH 200
KP+ C C FR + H+ + YH
Sbjct: 512 KPFTCLSCNKCFRQKQLLNAHF---RKYH 537
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +R+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 358 KRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEKPYECHICHTRFTQSGTMKIHI 417
>gi|260795400|ref|XP_002592693.1| hypothetical protein BRAFLDRAFT_67132 [Branchiostoma floridae]
gi|229277916|gb|EEN48704.1| hypothetical protein BRAFLDRAFT_67132 [Branchiostoma floridae]
Length = 150
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + CY CDY + + H+ HTGEKPY CG+C +R+ L H++
Sbjct: 75 MRTHTGEKPYKCYLCDYSTATKSSLDYHLTKHTGEKPYMCGECGYRTTYKYDLSKHMR 132
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTGEKPY C +C R+A + L H++
Sbjct: 19 MRTHTGEKPYKCDQCDYSAATKSSLDQHLTKHTGEKPYMCEECGHRTAQKSALSRHMR 76
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+C C + + + + H+RTHTGEKPY C QC + +A+ + L HL K
Sbjct: 1 MCGECGHRTADKSRLSQHMRTHTGEKPYKCDQCDYSAATKSSLDQHLTK 49
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H+RTHTGEKPY C C + +A+ + L YHL K
Sbjct: 56 YMCEECGHRTAQKSALSRHMRTHTGEKPYKCYLCDYSTATKSSLDYHLTK 105
>gi|260805184|ref|XP_002597467.1| hypothetical protein BRAFLDRAFT_58911 [Branchiostoma floridae]
gi|229282732|gb|EEN53479.1| hypothetical protein BRAFLDRAFT_58911 [Branchiostoma floridae]
Length = 207
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 19/119 (15%)
Query: 79 CKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
C+ C Q S L +L +H +T + P+ C CK S +L++L +H
Sbjct: 96 CEECSRQFSQLCNLKNHKQT---------HTGEKPYRCEECKGQFS-HLSDLRKH----- 140
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + C C I +++H+RTHTGEKPY C QC+ + + ++ L H+
Sbjct: 141 --MRTHTGEKPYKCENCGKQFGRIDVLKTHMRTHTGEKPYKCEQCSRQFSKLSNLKTHM 197
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
K +RT + C C +G ++ H+RTHTGEKPY C +C+ + + + L H
Sbjct: 26 KKHMRTHTGEKPYRCENCSRQFSELGSLKIHMRTHTGEKPYRCEECSRQFSQLCNLKNH 84
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C + ++ H+RTHTGEKPY C C+ + + + L H++
Sbjct: 1 MRTHTGEKPYRCENCSRQFSELESLKKHMRTHTGEKPYRCENCSRQFSELGSLKIHMR 58
Score = 39.3 bits (90), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ C C ++ +R H+RTHTGEKPY C C + + L H++
Sbjct: 122 YRCEECKGQFSHLSDLRKHMRTHTGEKPYKCENCGKQFGRIDVLKTHMR 170
>gi|260786502|ref|XP_002588296.1| hypothetical protein BRAFLDRAFT_114646 [Branchiostoma floridae]
gi|229273457|gb|EEN44307.1| hypothetical protein BRAFLDRAFT_114646 [Branchiostoma floridae]
Length = 355
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K IRT + C C + + + ++ H+RTHTGEKPYAC +C + + L H+
Sbjct: 96 KKHIRTHTGEKPYKCEECSWQFHELSHLKKHVRTHTGEKPYACKECGRKFSLQGNLKTHM 155
Query: 196 K 196
+
Sbjct: 156 R 156
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
KS +RT + C C ++G ++ H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 40 KSHMRTHTGEKPYRCEKCSRQFSDLGNLKRHMRTHTGEKPYRCEECSRQFSDLGNLKKHI 99
Query: 196 K 196
+
Sbjct: 100 R 100
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 65/153 (42%), Gaps = 18/153 (11%)
Query: 59 LNLNLSVLLVTTIPTQNHSLCKHCHSQLSHL-DLLDHCKTCSYMIRP----NANNTFSPF 113
L NL + T + H C+ C Q S L +L H +T +P + FS
Sbjct: 147 LQGNLKTHMRTHTGEKPH-RCEECSRQFSDLGNLKTHMRT-HTGEKPYKCDECSKRFSQM 204
Query: 114 CIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCM 163
I K + T+ E C C K +RT + C C +G +
Sbjct: 205 GIL-KVHMRTHGGEKPYRCDECSRQFSELVHLKKHMRTHTGEKPYSCEECSRQFSELGSL 263
Query: 164 RSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+ H+RTHTGEKPY C +C+ + + ++ L H++
Sbjct: 264 KKHMRTHTGEKPYRCEECSKQFSQLSNLKKHMR 296
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C + ++ H+RTHTGEKPY C +C+ + + + GL H+
Sbjct: 264 KKHMRTHTGEKPYRCEECSKQFSQLSNLKKHMRTHTGEKPYRCEECSRQFSELGGLQTHM 323
Query: 196 K 196
+
Sbjct: 324 R 324
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
C+ C Q S L L +M + C C S L+ L +H RT
Sbjct: 250 CEECSRQFSELGSLK-----KHMRTHTGEKPYR--CEECSKQFS-QLSNLKKHMRT---H 298
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C C +G +++H+RTHTGEKPY+C +C+ + + L H+K
Sbjct: 299 TGEKPYR----CEECSRQFSELGGLQTHMRTHTGEKPYSCKECSKQFRHLNALKRHMK 352
Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 150 CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
C C ++SH+RTHTGEKPY C +C+ + + + L H++
Sbjct: 26 CEECSKLYRTRSHLKSHMRTHTGEKPYRCEKCSRQFSDLGNLKRHMR 72
>gi|260807249|ref|XP_002598421.1| hypothetical protein BRAFLDRAFT_83205 [Branchiostoma floridae]
gi|229283694|gb|EEN54433.1| hypothetical protein BRAFLDRAFT_83205 [Branchiostoma floridae]
Length = 400
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 11/100 (11%)
Query: 107 NNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCYACDYF 156
+ FS C + K+ + T+ E C C K+ +RT F C C
Sbjct: 214 SRQFSQMC-HLKSHMRTHTGEKPYRCEECSKQCSTLSNLKTHMRTHTGEKPFRCEECSGQ 272
Query: 157 SYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IG +++H+RTHTGEKPY C +C+ + +++ L H +
Sbjct: 273 FCTIGQLKTHMRTHTGEKPYRCEECSKQCSTLGNLKTHKR 312
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ RT + C C +G +++H+RTHTGEKPY C +C+ + +++ L H+
Sbjct: 308 KTHKRTHTGEKPYKCEECSKQCSTLGSLKTHMRTHTGEKPYRCEECSKQCSALGNLKSHM 367
Query: 196 K 196
+
Sbjct: 368 R 368
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
K+ +RT + C C + G ++SH+RTHTGEKPY C +C+
Sbjct: 112 KTHMRTHTGEKPYGCEECSRQFSDPGALKSHMRTHTGEKPYRCEECS 158
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ ++T + C C + ++SH+RTHTGEKPY C +C+ + ++++ L H+
Sbjct: 196 KTHMQTHTGEKPYKCEECSRQFSQMCHLKSHMRTHTGEKPYRCEECSKQCSTLSNLKTHM 255
Query: 196 K 196
+
Sbjct: 256 R 256
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K+ +RT + C C +G ++SH+RTHTGEKPY C C + + + L H+
Sbjct: 336 KTHMRTHTGEKPYRCEECSKQCSALGNLKSHMRTHTGEKPYNCEVCNRQFSHLCHLKKHM 395
Query: 196 K 196
+
Sbjct: 396 R 396
Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + C C + +++H+RTHTGEKPY C +C+ + ++ L H+
Sbjct: 34 MRTHTGEKPYRCEECSRQFSQLSALKTHMRTHTGEKPYKCEECSKQFRRLSHLESHM 90
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
H+RTHTGEKPY C +C+ + + ++ L H++
Sbjct: 33 HMRTHTGEKPYRCEECSRQFSQLSALKTHMR 63
>gi|119595922|gb|EAW75516.1| CCCTC-binding factor (zinc finger protein)-like, isoform CRA_a
[Homo sapiens]
Length = 662
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 324 TSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 383
Query: 190 GLHYHLK 196
L H++
Sbjct: 384 KLKRHMR 390
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H +T K+ R F C C Y M +HIRTHTGE
Sbjct: 460 CRYCSAVFHERYA-LIQHQKTHKNEKR-------FKCKHCSYACKQERHMTAHIRTHTGE 511
Query: 174 KPYACGQCA--FRSASVAGLHYHLKKTYH 200
KP+ C C FR + H+ + YH
Sbjct: 512 KPFTCLSCNKCFRQKQLLNAHF---RKYH 537
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +R+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 358 KRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEKPYECHICHTRFTQSGTMKIHI 417
>gi|392933931|ref|NP_001255974.1| transcriptional repressor CTCFL isoform 5 [Homo sapiens]
Length = 627
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 324 TSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 383
Query: 190 GLHYHLK 196
L H++
Sbjct: 384 KLKRHMR 390
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H +T K+ R F C C Y M +HIRTHTGE
Sbjct: 460 CRYCSAVFHERYA-LIQHQKTHKNEKR-------FKCKHCSYACKQERHMTAHIRTHTGE 511
Query: 174 KPYACGQCA--FRSASVAGLHYHLKKTYH 200
KP+ C C FR + H+ + YH
Sbjct: 512 KPFTCLSCNKCFRQKQLLNAHF---RKYH 537
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +R+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 358 KRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEKPYECHICHTRFTQSGTMKIHI 417
>gi|281343864|gb|EFB19448.1| hypothetical protein PANDA_020601 [Ailuropoda melanoleuca]
Length = 768
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
VC C + ++ H+RTHTGEKPY C C FR A + L H+K +
Sbjct: 513 VCVECGKGFRHPSELKKHMRTHTGEKPYQCQYCVFRCADQSNLKTHIKSKH 563
>gi|260815817|ref|XP_002602669.1| hypothetical protein BRAFLDRAFT_72962 [Branchiostoma floridae]
gi|229287980|gb|EEN58681.1| hypothetical protein BRAFLDRAFT_72962 [Branchiostoma floridae]
Length = 480
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
+F+C C Y + M H+RTHTGE+PY C QC + ++S + + H K+
Sbjct: 280 RFMCGECGYRTVYKNAMFKHMRTHTGERPYKCDQCDYTASSYSTMDSHKKR 330
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT + C CDY + + M SH + HTGE+PY C C RS L+ H+
Sbjct: 300 MRTHTGERPYKCDQCDYTASSYSTMDSHKKRHTGERPYVCELCGHRSKVKGDLNRHM 356
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 13/80 (16%)
Query: 121 LSTNLNELIEHCRTCK--SMIRTDPFRH-----------KFVCYACDYFSYNIGCMRSHI 167
+ T+ E C C+ S+ ++D RH +F C C+Y + + H+
Sbjct: 184 MRTHTGEKPHQCDQCEYASLKKSDLNRHHLVKHNTTGEKRFKCNQCEYKTNLKALLSQHL 243
Query: 168 RTHTGEKPYACGQCAFRSAS 187
HTGEKPY CG+C +++A
Sbjct: 244 VMHTGEKPYMCGECGYKAAK 263
Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
F+C C + + + H+RTHTGEKP+ C QC + S + L+ H
Sbjct: 165 FMCGECGFRTALKHNLAQHMRTHTGEKPHQCDQCEYASLKKSDLNRH 211
Score = 39.7 bits (91), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 113 FCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCM-RSHIRTHT 171
C C S N +I+H R + + PF+ C C Y + + R H+ HT
Sbjct: 108 MCGEC-GYRSDQRNHIIQHMRA--THMGEKPFK----CDQCVYSATKKSDLSRHHLLKHT 160
Query: 172 GEKPYACGQCAFRSASVAGLHYHLK 196
EKP+ CG+C FR+A L H++
Sbjct: 161 DEKPFMCGECGFRTALKHNLAQHMR 185
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 136 KSMIRTDPFRH--------KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSAS 187
+S ++ D RH ++ C CD+ + + +H+ HTGEKP+ C C +R+ S
Sbjct: 345 RSKVKGDLNRHMVLHTGEKQYKCNLCDFSAIWKASLDAHLVKHTGEKPHLCETCGYRTHS 404
Query: 188 VAGLHYHLK 196
A L H+K
Sbjct: 405 KAYLLDHVK 413
>gi|380792047|gb|AFE67899.1| transcription factor HIVEP3 isoform a, partial [Macaca mulatta]
Length = 461
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
K++C C ++ HIR+HTGE+PY CG C F + + L+ H K H
Sbjct: 191 KYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAH 244
>gi|260841501|ref|XP_002613951.1| hypothetical protein BRAFLDRAFT_67486 [Branchiostoma floridae]
gi|229299341|gb|EEN69960.1| hypothetical protein BRAFLDRAFT_67486 [Branchiostoma floridae]
Length = 363
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 65/165 (39%), Gaps = 30/165 (18%)
Query: 53 MSLDQILNLNLSVLLVTTIPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSP 112
+S D I N +L TI T H C+ C Q S L L I + P
Sbjct: 6 ISSDVIEN-SLEGEFAATIVTAKHYKCEECSKQFSCLSSLK--------IHIRTHTGEKP 56
Query: 113 F-CIYC----------KAVLSTNLNELIEHCRTC----------KSMIRTDPFRHKFVCY 151
+ C C K + T+ E +C C K +RT + C
Sbjct: 57 YRCEECSRQFSQLGSLKTHIRTHTGEKPYNCEECNMQFTTTDVLKKHMRTHTGEKPYNCE 116
Query: 152 ACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
C + G ++ H+RTHTGEKPY C +C+ + ++ L H+K
Sbjct: 117 ECSKQFTDQGNLKKHMRTHTGEKPYICEECSKQFRHMSSLKQHMK 161
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 54/121 (44%), Gaps = 19/121 (15%)
Query: 78 LCKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTC 135
+CK C Q S + DL H +T + P+ C C TN +L +H
Sbjct: 254 ICKECSKQFSQISDLKTHMRT---------HTGEKPYKCEECTKQF-TNQGDLKKH---- 299
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+RT F C C + ++ H+RTHTGEKPY C +C+ R + + L H+
Sbjct: 300 ---MRTHTGEKPFKCEECSKQFTILNTLKIHMRTHTGEKPYQCVECSKRFSQLGSLKNHM 356
Query: 196 K 196
+
Sbjct: 357 Q 357
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 44/111 (39%), Gaps = 17/111 (15%)
Query: 95 CKTCSYMIRPNAN--------NTFSPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFR 145
C+ CS R + P+ C C S N I +RT
Sbjct: 199 CEECSKQYRQQGDLKRHLMTHTGEKPYRCEECNKQFSQKGNLKI--------HMRTHTGE 250
Query: 146 HKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
++C C I +++H+RTHTGEKPY C +C + + L H++
Sbjct: 251 KPYICKECSKQFSQISDLKTHMRTHTGEKPYKCEECTKQFTNQGDLKKHMR 301
Score = 39.3 bits (90), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C G ++ H+ THTGEKPY C +C + + L H++
Sbjct: 188 MRTHTGEKPYRCEECSKQYRQQGDLKRHLMTHTGEKPYRCEECNKQFSQKGNLKIHMR 245
>gi|111550164|gb|ABH10104.1| BORIS transcription factor transcript variant A5 [Homo sapiens]
Length = 627
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 324 TSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 383
Query: 190 GLHYHLK 196
L H++
Sbjct: 384 KLKRHMR 390
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H +T K+ R F C C Y M +HIRTHTGE
Sbjct: 460 CRYCSAVFHERYA-LIQHQKTHKNEKR-------FKCKHCSYACKQERHMTAHIRTHTGE 511
Query: 174 KPYACGQCA--FRSASVAGLHYHLKKTYH 200
KP+ C C FR + H+ + YH
Sbjct: 512 KPFTCLSCNKCFRQKQLLNAHF---RKYH 537
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +R+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 358 KRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEKPYECHICHTRFTQSGTMKIHI 417
>gi|327291771|ref|XP_003230594.1| PREDICTED: zinc finger protein 135-like [Anolis carolinensis]
Length = 362
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+S +RT + C C G +RSH+RTHTGEKP+ C +C + LH HL
Sbjct: 117 RSHLRTHTGEKPYQCMECGKSFSESGALRSHLRTHTGEKPHQCMECGQSFSQSGSLHSHL 176
Query: 196 K 196
+
Sbjct: 177 R 177
Score = 43.1 bits (100), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 28/57 (49%)
Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RT + C C G +RSH+RTHTGEKPY C +C + L HL+
Sbjct: 93 RTHTGEKPYTCVECGKSFSESGHLRSHLRTHTGEKPYQCMECGKSFSESGALRSHLR 149
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+S +RT C C G + SH+RTHTGEKP+ C +C + LH H
Sbjct: 145 RSHLRTHTGEKPHQCMECGQSFSQSGSLHSHLRTHTGEKPHECMECGKSFSENGALHRHQ 204
Query: 196 K 196
+
Sbjct: 205 R 205
Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 140 RTDPFRHKFVCYACDY-FSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
RT + C C FS++ G +R H RTHTGEKPY C +C + L HL+
Sbjct: 65 RTHTGEKPYTCVECGKSFSWS-GALRRHQRTHTGEKPYTCVECGKSFSESGHLRSHLR 121
Score = 39.7 bits (91), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAG-LHYH 194
+S +RT C C G +R H RTHTGEKPY C +C +S S +G LH H
Sbjct: 285 RSHLRTHTGEKPHQCTECGKSFRQSGNLRRHQRTHTGEKPYQCIECG-KSFSESGVLHRH 343
Query: 195 LK 196
+
Sbjct: 344 HR 345
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 148 FVCYACDY-FSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAG 190
+ C C FS++ G +R H RTHTGEKPY C +C +S S +G
Sbjct: 45 YTCVECGKSFSWS-GALRRHQRTHTGEKPYTCVECG-KSFSWSG 86
Score = 35.8 bits (81), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 3/34 (8%)
Query: 156 FSYNIGCMRSHIRTHTGEKPYACGQCA--FRSAS 187
FS+ +RSH+RTHTGEKP+ C +C FR +
Sbjct: 278 FSWGAQ-LRSHLRTHTGEKPHQCTECGKSFRQSG 310
>gi|291407962|ref|XP_002720194.1| PREDICTED: zinc finger protein 711 isoform 2 [Oryctolagus
cuniculus]
Length = 807
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
VC C + ++ H+RTHTGEKPY C C FR A + L H+K +
Sbjct: 551 VCVECGKGFRHPSELKKHMRTHTGEKPYQCQYCVFRCADQSNLKTHIKSKH 601
>gi|47209713|emb|CAF94606.1| unnamed protein product [Tetraodon nigroviridis]
Length = 313
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C+ C+ ++ N +S +R FVC C+ +R+H+R HTGE
Sbjct: 181 CVICRRGFNSRSN--------LRSHMRIHTLDKPFVCRFCNRRFSQSSTLRNHVRLHTGE 232
Query: 174 KPYACGQCAFRSASVAGLHYHLKKTYH 200
+PY C C + +AGL H K H
Sbjct: 233 RPYKCHVCQSAYSQLAGLRAHQKSARH 259
>gi|410055358|ref|XP_003953830.1| PREDICTED: transcriptional repressor CTCFL [Pan troglodytes]
Length = 627
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 134 TCKSMIRTDPFRH----KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVA 189
T ++R ++H F C C Y S ++ H+R+HTGE+P+ C QC++ S
Sbjct: 324 TSGELVRHTRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTY 383
Query: 190 GLHYHLK 196
L H++
Sbjct: 384 KLKRHMR 390
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C YC AV LI+H +T K+ R F C C Y M +HIRTHTGE
Sbjct: 460 CRYCPAVFHERYA-LIQHQKTHKNEKR-------FKCKHCSYACKQERHMTAHIRTHTGE 511
Query: 174 KPYACGQCA--FRSASVAGLHYHLKKTYH 200
KP+ C C FR + H+ + YH
Sbjct: 512 KPFTCLSCNKCFRQKQLLNAHF---RKYH 537
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +R+ F C C Y S + ++ H+RTH+GEKPY C C R + H+
Sbjct: 358 KRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEKPYECHICHTRFTQSGTMKIHI 417
>gi|403295671|ref|XP_003938755.1| PREDICTED: zinc finger protein 711 isoform 1 [Saimiri boliviensis
boliviensis]
gi|403295673|ref|XP_003938756.1| PREDICTED: zinc finger protein 711 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 809
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
VC C + ++ H+RTHTGEKPY C C FR A + L H+K +
Sbjct: 554 VCVECGKGFRHPSELKKHMRTHTGEKPYQCQYCIFRCADQSNLKTHIKSKH 604
>gi|395506256|ref|XP_003757451.1| PREDICTED: PR domain zinc finger protein 12 [Sarcophilus harrisii]
Length = 355
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
+S +R FVC C+ +R+H+R HTGE+PY C C + +AGL H
Sbjct: 259 RSHMRIHTLDKPFVCRFCNRRFSQSSTLRNHVRLHTGERPYKCQVCQSAYSQLAGLRAHQ 318
Query: 196 KKTYH 200
K H
Sbjct: 319 KSARH 323
>gi|260795651|ref|XP_002592818.1| hypothetical protein BRAFLDRAFT_65403 [Branchiostoma floridae]
gi|229278042|gb|EEN48829.1| hypothetical protein BRAFLDRAFT_65403 [Branchiostoma floridae]
Length = 432
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C +G +++H+RTHTGEKPY C +C+ + + + L H+
Sbjct: 188 KKHMRTHTGEKPYNCEKCSRQFNELGALKTHMRTHTGEKPYKCEECSRQFSELGALKRHI 247
Query: 196 K 196
+
Sbjct: 248 R 248
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 50/120 (41%), Gaps = 19/120 (15%)
Query: 79 CKHCHSQLSHLD-LLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
C+ C Q S LD L H +T + P+ C C S L L H RT
Sbjct: 34 CEECSKQFSRLDDLRRHMRT---------HTGEKPYQCEECNRQFS-QLGHLKTHMRT-- 81
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
P+R C C G ++ H+RTHTGEKPY C +C+ R + L H +
Sbjct: 82 -HTGEKPYR----CEECSKQFRQRGVLKKHMRTHTGEKPYRCEECSMRFRELIHLKTHKR 136
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 47/106 (44%), Gaps = 19/106 (17%)
Query: 79 CKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPF-CIYCKAVLSTNLNELIEHCRTCK 136
C+ C Q S L +L H +T + P+ C C S NEL K
Sbjct: 174 CEECSRQFSQLCNLKKHMRT---------HTGEKPYNCEKC----SRQFNELG----ALK 216
Query: 137 SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
+ +RT + C C +G ++ HIRTHTGEKPY C +C+
Sbjct: 217 THMRTHTGEKPYKCEECSRQFSELGALKRHIRTHTGEKPYKCEECS 262
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
K +RT + C C +G ++ H+RTHTGEKPY+C C+ + + + L H+
Sbjct: 340 KRHVRTHTCEKPYTCEECSKQFCQLGALKIHMRTHTGEKPYSCEDCSKQFSDLRNLKKHM 399
Query: 196 K 196
+
Sbjct: 400 R 400
Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 52/140 (37%), Gaps = 31/140 (22%)
Query: 79 CKHCHSQLSHLDLLD------------HCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLN 126
C+ C+ Q S L L C+ CS R K + T+
Sbjct: 62 CEECNRQFSQLGHLKTHMRTHTGEKPYRCEECSKQFRQRG---------VLKKHMRTHTG 112
Query: 127 ELIEHCRTC----------KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY 176
E C C K+ RT + C C G ++SH+RTHT EKPY
Sbjct: 113 EKPYRCEECSMRFRELIHLKTHKRTHTGEKPYKCEECSRQFSQPGSLKSHMRTHTAEKPY 172
Query: 177 ACGQCAFRSASVAGLHYHLK 196
C +C+ + + + L H++
Sbjct: 173 RCEECSRQFSQLCNLKKHMR 192
Score = 42.7 bits (99), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C C ++ ++ H+RTHTGEKPY+C +C+ + + + L H++
Sbjct: 371 MRTHTGEKPYSCEDCSKQFSDLRNLKKHMRTHTGEKPYSCEECSRQFSQLGNLKKHMR 428
Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
F C C + ++ H+RTHT EKPY C +C+ + + L H++
Sbjct: 324 FKCEECSKQFSELVALKRHVRTHTCEKPYTCEECSKQFCQLGALKIHMR 372
>gi|260782890|ref|XP_002586513.1| hypothetical protein BRAFLDRAFT_249260 [Branchiostoma floridae]
gi|229271628|gb|EEN42524.1| hypothetical protein BRAFLDRAFT_249260 [Branchiostoma floridae]
Length = 592
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + HIRTHTGEKPY C QC + +A+ + L HL K
Sbjct: 173 YMCGECGYRTAQKSHLAEHIRTHTGEKPYKCDQCDYSAAAKSTLDQHLAK 222
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C C+Y + + H+ HTGEKPY CG+C +R+A + L H++
Sbjct: 306 MRTHTGEKPFKCDQCNYSTAQKSHLDRHLAKHTGEKPYMCGECGYRTAHKSALSKHMR 363
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + + H+RTHTGEKPY C QC + +A + L+ HL
Sbjct: 343 YMCGECGYRTAHKSALSKHMRTHTGEKPYKCDQCDYSAARRSTLNQHL 390
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG+KPY CG+C +R+A + L H++
Sbjct: 136 MRTHTGDKPYKCDQCDYSASQKYSLDQHLAKHTGDKPYMCGECGYRTAQKSHLAEHIR 193
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CDY + + H+ HTG+KPY CG+C +R+A + + H++
Sbjct: 24 MRTHTGEKPFKCDLCDYSAAQKSHLDKHLANHTGDKPYMCGECGYRTAIKSHISQHMR 81
Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
IRT + C CDY + + H+ H+G+KPY CG+C +R+A L H++
Sbjct: 192 IRTHTGEKPYKCDQCDYSAAAKSTLDQHLAKHSGDKPYMCGECGYRTAWKTHLAIHMR 249
Score = 43.1 bits (100), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ H G+KPY CG+C +R+A + L H++
Sbjct: 80 MRTHTGEKPYKCDQCDYSTATKHNLDRHLAIHKGDKPYMCGECGYRAARKSDLSRHMR 137
Score = 42.7 bits (99), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
F+C C Y + + H RTHTG+KPY C QC + +A L HL K
Sbjct: 399 FMCGDCGYRTARKSLLSKHRRTHTGDKPYKCDQCDYSAAKKCNLDCHLAK 448
Score = 42.7 bits (99), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C Y + + H+RTHTGEKPY C QC + +A + L+ HL K
Sbjct: 229 YMCGECGYRTAWKTHLAIHMRTHTGEKPYKCDQCDYSAADKSTLNRHLAK 278
Score = 39.3 bits (90), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
++C C Y + + H+RTHTGEKP+ C C + +A + L HL
Sbjct: 5 YMCGECGYRAAKKSHLSRHMRTHTGEKPFKCDLCDYSAAQKSHLDKHL 52
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + H+ HTG KP+ CG C +R+A + L H +
Sbjct: 362 MRTHTGEKPYKCDQCDYSAARRSTLNQHLAIHTGYKPFMCGDCGYRTARKSLLSKHRR 419
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
H+RTHTGEKP+ C QC + +A + L HL K
Sbjct: 305 HMRTHTGEKPFKCDQCNYSTAQKSHLDRHLAK 336
Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY--ACGQCAFRSASVAGLHYHLK 196
+RT + C CDY + + + H+ HTGE+PY G C +R+A + L H++
Sbjct: 248 MRTHTGEKPYKCDQCDYSAADKSTLNRHLAKHTGEEPYMRGGGGCWYRTAWGSQLSRHMR 307
Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
++C C + + + H+R +TGEKPY C QC + +A L HL K
Sbjct: 455 YMCGECGHRTVLKSDLARHMRRYTGEKPYKCDQCGYSTAHKPNLGRHLAK 504
>gi|432957814|ref|XP_004085892.1| PREDICTED: zinc finger protein 782-like, partial [Oryzias latipes]
Length = 277
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 49/104 (47%), Gaps = 17/104 (16%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
CK C + SH L+ ++M FS C CK S L+ L KS
Sbjct: 116 CKECDASFSHRSSLE-----THMRTHTGEKPFS--CKECKKSFS-QLSSL-------KSH 160
Query: 139 IRTDPFRHKFVCYACD-YFSYNIGCMRSHIRTHTGEKPYACGQC 181
+RT F C CD FS+ + +H+RTHTGEKP++C +C
Sbjct: 161 MRTHTGEKPFSCKECDASFSHKYS-LETHMRTHTGEKPFSCKEC 203
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 54/128 (42%), Gaps = 18/128 (14%)
Query: 54 SLDQILNLNLSVLLVTTIPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPF 113
S QI NL + T + CK SQ+SHL ++M FS
Sbjct: 66 SFSQICNLKTHMRTHTGEKPFSCKECKKSFSQISHLK--------THMRTHTGEKPFS-- 115
Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
C C A S H + ++ +RT F C C + ++SH+RTHTGE
Sbjct: 116 CKECDASFS--------HRSSLETHMRTHTGEKPFSCKECKKSFSQLSSLKSHMRTHTGE 167
Query: 174 KPYACGQC 181
KP++C +C
Sbjct: 168 KPFSCKEC 175
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 15/132 (11%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRP----NANNTFSPFCIYCKAVLSTNLNELIEHCRT 134
CK+C S+ L +T +P + +FS C K + T+ E C+
Sbjct: 32 CKNCEKSFSYKSNLKKHRTTHTGEKPFKCKECDASFSQICNL-KTHMRTHTGEKPFSCKE 90
Query: 135 CK----------SMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFR 184
CK + +RT F C CD + + +H+RTHTGEKP++C +C
Sbjct: 91 CKKSFSQISHLKTHMRTHTGEKPFSCKECDASFSHRSSLETHMRTHTGEKPFSCKECKKS 150
Query: 185 SASVAGLHYHLK 196
+ ++ L H++
Sbjct: 151 FSQLSSLKSHMR 162
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 15/118 (12%)
Query: 79 CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
CK C + SH L+ ++M FS C C A S H + ++
Sbjct: 172 CKECDASFSHKYSLE-----THMRTHTGEKPFS--CKECDASFS--------HKYSLETH 216
Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
+RT F C CD + ++SH+RTHT EKP+ C +C + + L H+K
Sbjct: 217 MRTHTGEKPFTCKECDASFSHRSNLKSHMRTHTVEKPFPCNKCDASFSRIPLLKTHMK 274
>gi|431905170|gb|ELK10218.1| Zinc finger protein 711 [Pteropus alecto]
Length = 763
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY 199
VC C + ++ H+RTHTGEKPY C C FR A + L H+K +
Sbjct: 508 VCVECGKGFRHPSELKKHMRTHTGEKPYQCQYCVFRCADQSNLKTHIKSKH 558
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.329 0.137 0.437
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,805,948,413
Number of Sequences: 23463169
Number of extensions: 100715501
Number of successful extensions: 587265
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 25105
Number of HSP's successfully gapped in prelim test: 6444
Number of HSP's that attempted gapping in prelim test: 332675
Number of HSP's gapped (non-prelim): 238335
length of query: 200
length of database: 8,064,228,071
effective HSP length: 135
effective length of query: 65
effective length of database: 9,191,667,552
effective search space: 597458390880
effective search space used: 597458390880
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 73 (32.7 bits)