RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy7455
(400 letters)
>gnl|CDD|238214 cd00354, FBPase, Fructose-1,6-bisphosphatase, an enzyme that
catalyzes the hydrolysis of fructose-1,6-biphosphate
into fructose-6-phosphate and is critical in
gluconeogenesis pathway. The alignment model also
includes chloroplastic FBPases and
sedoheptulose-1,7-biphosphatases that play a role in
pentose phosphate pathway (Calvin cycle).
Length = 315
Score = 388 bits (1000), Expect = e-135
Identities = 158/367 (43%), Positives = 206/367 (56%), Gaps = 83/367 (22%)
Query: 18 VLEQQKHIPNATGELTQLLVSIQTAVKAISSAVRKAGIAHLYGIAGNVNVQGEEVKKLDV 77
+LEQ + ATG+LT LL S+ A K IS AVR+AG+A L G+AG+VNVQG+E KKLDV
Sbjct: 1 LLEQLRK-GAATGDLTDLLSSLALACKEISRAVRRAGLAGLLGLAGSVNVQGDEQKKLDV 59
Query: 78 LSNELFVNMLTSSYSTCLLVSEENETA-----------------LERSSLQLII------ 114
L+N++F+ L SS +L SEE E L+ SS I
Sbjct: 60 LANDIFIEALKSSGVVAVLASEEEEEPVPVEESKDGKYLVAFDPLDGSS---NIDANVSV 116
Query: 115 -------KKQTPGPVTPNDALQKGNEMVAGGYALYGSATMVVLSVGKGQGVHGFMLDPVE 167
+ T D LQ G VA GYALYG +TM+VL++G QGVHGF LDP
Sbjct: 117 GTIFSIYPGPSGADATEKDFLQPGRNQVAAGYALYGPSTMLVLTLG--QGVHGFTLDP-- 172
Query: 168 VSKQGKYIVCFDPLDGSSNIDCLVSIGSIFSIFRIQSCVFLTVKAIGEFVLSDYNIRVPS 227
++GEF+L+ N+++P
Sbjct: 173 --------------------------------------------SLGEFILTHPNVKIPK 188
Query: 228 RGKIYSINEGYTSLWAPAIREYVDSKKCP-ASGKPYGARYIGSMVADVHRTLKYGGIFMY 286
+GKIYSINEG W +++Y+D K GKPY RYIGSMVADVHR L GGIF+Y
Sbjct: 189 KGKIYSINEGNYRYWDEPVKKYIDDCKAGEDGGKPYNLRYIGSMVADVHRILVRGGIFLY 248
Query: 287 PATQDAPKGKLRLLYEGNPMAYIVQEAGGLASNGEISILDVQPTSIHQRSPIFLGSKEDV 346
PA + +PKGKLRLLYE NPMA++V++AGG A++G+ ILD+ PTS+HQR P+ LGSKE+V
Sbjct: 249 PADKKSPKGKLRLLYEANPMAFLVEQAGGKATDGKERILDIVPTSLHQRVPVILGSKEEV 308
Query: 347 EELLAAI 353
E + +
Sbjct: 309 ERVEEYL 315
Score = 64.5 bits (158), Expect = 2e-11
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 349 LLAAIGEFVLSDYNIRVPSRGKIYSINEGYTSLWAPAIREYVDSKKCPASGN 400
L ++GEF+L+ N+++P +GKIYSINEG W +++Y+D K G
Sbjct: 170 LDPSLGEFILTHPNVKIPKKGKIYSINEGNYRYWDEPVKKYIDDCKAGEDGG 221
>gnl|CDD|236458 PRK09293, PRK09293, fructose-1,6-bisphosphatase; Provisional.
Length = 327
Score = 371 bits (955), Expect = e-128
Identities = 156/376 (41%), Positives = 201/376 (53%), Gaps = 79/376 (21%)
Query: 10 NCMTLTRFVLEQQKHIPNATGELTQLLVSIQTAVKAISSAVRKAGIAHLYGIAGNVNVQG 69
+ TL F++EQQ+ P+ATGELT L+ +I A K IS A+ K G+A + G AG NVQG
Sbjct: 1 SMKTLGEFLVEQQREFPHATGELTALISAIALAAKIISRAINKGGLADILGAAGTENVQG 60
Query: 70 EEVKKLDVLSNELFVNMLTSSYSTCLLVSEENETA----------------LERSSLQLI 113
E KKLDV +NE+ + L + L SEE + L+ SS I
Sbjct: 61 ETQKKLDVFANEILIEALKARGHVAGLASEEEDEIVPIPENEGKYLVAYDPLDGSSN--I 118
Query: 114 -----------IKKQTPGPVTPNDALQKGNEMVAGGYALYGSATMVVLSVGKGQGVHGFM 162
I + G T D LQ GN VA GY LYG +TM+VL+ G GVHGF
Sbjct: 119 DVNVSVGTIFSIYRAPVGTPTEEDFLQPGNNQVAAGYVLYGPSTMLVLTTG--DGVHGFT 176
Query: 163 LDPVEVSKQGKYIVCFDPLDGSSNIDCLVSIGSIFSIFRIQSCVFLTVKAIGEFVLSDYN 222
LDP ++GEFVL+ N
Sbjct: 177 LDP----------------------------------------------SLGEFVLTHEN 190
Query: 223 IRVPSRGKIYSINEGYTSLWAPAIREYVDS--KKCPASGKPYGARYIGSMVADVHRTLKY 280
IR+P GK Y+INEG W P +++Y++ K G+PY RYIGSMVADVHR L
Sbjct: 191 IRIPEDGKEYAINEGNQRHWEPGVKKYIELLAGKDGPRGRPYNMRYIGSMVADVHRILLK 250
Query: 281 GGIFMYPATQDAPKGKLRLLYEGNPMAYIVQEAGGLASNGEISILDVQPTSIHQRSPIFL 340
GGIF+YPA + P GKLRLLYE NPMA++V++AGG AS+G+ ILD++P S+HQR P+FL
Sbjct: 251 GGIFLYPADEPYPNGKLRLLYEANPMAFLVEQAGGAASDGKQRILDIEPESLHQRVPLFL 310
Query: 341 GSKEDVEELLAAIGEF 356
GSKE+VE + E
Sbjct: 311 GSKEEVERVEEYHAEA 326
Score = 54.1 bits (131), Expect = 4e-08
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 349 LLAAIGEFVLSDYNIRVPSRGKIYSINEGYTSLWAPAIREYVDSKK 394
L ++GEFVL+ NIR+P GK Y+INEG W P +++Y++
Sbjct: 177 LDPSLGEFVLTHENIRIPEDGKEYAINEGNQRHWEPGVKKYIELLA 222
>gnl|CDD|215854 pfam00316, FBPase, Fructose-1-6-bisphosphatase.
Length = 325
Score = 339 bits (872), Expect = e-115
Identities = 150/374 (40%), Positives = 200/374 (53%), Gaps = 78/374 (20%)
Query: 12 MTLTRFVLEQQKHIPNATGELTQLLVSIQTAVKAISSAVRKAGIAHLYGIAGNVNVQGEE 71
MTLTRF++E+Q ATGELT LL S+ A K I+ A+R+AG+A+L G AG NVQG+E
Sbjct: 1 MTLTRFIIEEQ-LEEFATGELTDLLSSLALAAKFIARAIRRAGLANLLGGAGGTNVQGDE 59
Query: 72 VKKLDVLSNELFVNMLTSSYSTCLLVSEENETA-----------------LERSS----- 109
KKLDVL+++LF L +S + +L SEE + L+ SS
Sbjct: 60 QKKLDVLADDLFRAALKASGAVAVLASEEQDELVVLEGNEEGKYAVAFDPLDGSSNIDTN 119
Query: 110 -----LQLIIKKQTPGPVTPNDALQKGNEMVAGGYALYGSATMVVLSVGKGQGVHGFMLD 164
+ I + + T D LQ G E VA GY +YG +TM+VL++G GVHGF LD
Sbjct: 120 VSVGTIFSIYPRVSGDSPTTIDFLQPGREQVAAGYVIYGPSTMLVLTLG--CGVHGFTLD 177
Query: 165 PVEVSKQGKYIVCFDPLDGSSNIDCLVSIGSIFSIFRIQSCVFLTVKAIGEFVLSDYNIR 224
P +GEF+L D ++
Sbjct: 178 P----------------------------------------------DLGEFILVDETVK 191
Query: 225 VPSRGKIYSINEGYTSLWAPAIREYVDSKKCPASG--KPYGARYIGSMVADVHRTLKYGG 282
+P GKI+SINEG W P +R+Y+D K G +PY RYIGSMVADVHR L GG
Sbjct: 192 IPEEGKIFSINEGNYRHWDPPVRKYIDDCKAGDDGPRRPYNMRYIGSMVADVHRILLKGG 251
Query: 283 IFMYPATQDAPKGKLRLLYEGNPMAYIVQEAGGLASNGEISILDVQPTSIHQRSPIFLGS 342
IF+YP + P GKLRLLYE PMA+++++AGG A++G ILD+ PT +HQR+P LGS
Sbjct: 252 IFLYPGDKRYPNGKLRLLYECAPMAFLIEQAGGGATDGRKRILDIVPTRLHQRTPFILGS 311
Query: 343 KEDVEELLAAIGEF 356
++V E
Sbjct: 312 IDEVARFEEYHYEP 325
Score = 58.1 bits (141), Expect = 2e-09
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 352 AIGEFVLSDYNIRVPSRGKIYSINEGYTSLWAPAIREYVDSKKCPASGN 400
+GEF+L D +++P GKI+SINEG W P +R+Y+D K G
Sbjct: 179 DLGEFILVDETVKIPEEGKIFSINEGNYRHWDPPVRKYIDDCKAGDDGP 227
>gnl|CDD|215147 PLN02262, PLN02262, fructose-1,6-bisphosphatase.
Length = 340
Score = 333 bits (855), Expect = e-113
Identities = 162/369 (43%), Positives = 206/369 (55%), Gaps = 76/369 (20%)
Query: 9 TNCMTLTRFVLEQQKHIPNATGELTQLLVSIQTAVKAISSAVRKAGIAHLYGIAGNVNVQ 68
T+ MT+TRFVL +Q P A G+LT LL I K + SAV KAG+A L G+AG NVQ
Sbjct: 10 TDLMTITRFVLNEQSKHPEARGDLTILLSHIVLGCKFVCSAVNKAGLAKLIGLAGETNVQ 69
Query: 69 GEEVKKLDVLSNELFVNMLTSSYSTCLLVSEENETA-----------------LERSS-- 109
GEE KKLDVLSN++F+ L SS T +LVSEE+E A L+ SS
Sbjct: 70 GEEQKKLDVLSNDVFIKALVSSGRTNVLVSEEDEEAIFVEPSKRGRYCVVFDPLDGSSNI 129
Query: 110 --------LQLIIKKQTPGPVTPNDALQKGNEMVAGGYALYGSATMVVLSVGKGQGVHGF 161
+ I + G T D LQ G EMVA GY +YGS+ +VLS G GV+GF
Sbjct: 130 DCGVSIGTIFGIYMLKDGGEGTVEDVLQPGKEMVAAGYCMYGSSCTLVLSTG--GGVNGF 187
Query: 162 MLDPVEVSKQGKYIVCFDPLDGSSNIDCLVSIGSIFSIFRIQSCVFLTVKAIGEFVLSDY 221
LDP ++GEF+L+
Sbjct: 188 TLDP----------------------------------------------SLGEFILTHP 201
Query: 222 NIRVPSRGKIYSINEGYTSLWAPAIREYVDSKKCPASG-KPYGARYIGSMVADVHRTLKY 280
+I++P +GKIYS+NEG W +YV+ K P G P RYIGSMVADVHRTL Y
Sbjct: 202 DIKIPKKGKIYSVNEGNAKNWDGPTAKYVEKCKFPKDGSSPKSLRYIGSMVADVHRTLLY 261
Query: 281 GGIFMYPATQDAPKGKLRLLYEGNPMAYIVQEAGGLASNGEISILDVQPTSIHQRSPIFL 340
GGIF+YPA + +P GKLR+LYE PM+++V++AGG A G+ LD+ PT IH+RSPIFL
Sbjct: 262 GGIFLYPADKKSPNGKLRVLYEVFPMSFLVEQAGGQAFTGKQRALDLVPTKIHERSPIFL 321
Query: 341 GSKEDVEEL 349
GS +DVEE+
Sbjct: 322 GSYDDVEEI 330
Score = 54.4 bits (131), Expect = 3e-08
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 352 AIGEFVLSDYNIRVPSRGKIYSINEGYTSLWAPAIREYVDSKKCPASG 399
++GEF+L+ +I++P +GKIYS+NEG W +YV+ K P G
Sbjct: 192 SLGEFILTHPDIKIPKKGKIYSVNEGNAKNWDGPTAKYVEKCKFPKDG 239
>gnl|CDD|223236 COG0158, Fbp, Fructose-1,6-bisphosphatase [Carbohydrate transport
and metabolism].
Length = 326
Score = 332 bits (853), Expect = e-112
Identities = 144/373 (38%), Positives = 201/373 (53%), Gaps = 75/373 (20%)
Query: 11 CMTLTRFVLEQQKHIPNATGELTQLLVSIQTAVKAISSAVRKAGIAHLYGIAGNVNVQGE 70
TL RF++E+QK AT EL+ +L SI A K I+ + KAG+A + G +G NVQG+
Sbjct: 1 MKTLGRFLVEKQKEFKAATAELSAVLSSIALAGKEIAREINKAGLAGVLGYSGAENVQGD 60
Query: 71 EVKKLDVLSNELFVNMLTSSYSTCLLVSEENETAL---ERSSLQLI-------------- 113
KKLDV +NE+ + L + + + SEE + + E + +
Sbjct: 61 TQKKLDVFANEILIEALKARGNVAGIASEEEDEPVTFPENNGSYAVAYDPLDGSSNIDVN 120
Query: 114 --------IKKQTPGPVTPNDALQKGNEMVAGGYALYGSATMVVLSVGKGQGVHGFMLDP 165
I ++ P T D LQ GN+ VA GY +YG +TM+V ++G +GVHGF LDP
Sbjct: 121 VSVGTIFSIYRRPGSPGTEEDFLQPGNKQVAAGYVVYGPSTMLVYTLG--EGVHGFTLDP 178
Query: 166 VEVSKQGKYIVCFDPLDGSSNIDCLVSIGSIFSIFRIQSCVFLTVKAIGEFVLSDYNIRV 225
+GEF+L+ NIR+
Sbjct: 179 S----------------------------------------------LGEFILTHENIRI 192
Query: 226 PSRGKIYSINEGYTSLWAPAIREYVDSKKC--PASGKPYGARYIGSMVADVHRTLKYGGI 283
P +GKIY+INEG W +++Y+ + +PY RYIGSMVADVHR L GGI
Sbjct: 193 PEKGKIYAINEGNQRHWEEGVKKYIKDCFAEDKGTRRPYNMRYIGSMVADVHRILLKGGI 252
Query: 284 FMYPATQDAPKGKLRLLYEGNPMAYIVQEAGGLASNGEISILDVQPTSIHQRSPIFLGSK 343
F+YP+ + AP GKLRLLYE NPMA++V++AGG A++G+ ILD+ P +HQR P+FLGSK
Sbjct: 253 FLYPSDKRAPNGKLRLLYEANPMAFLVEQAGGKATDGKQRILDIVPEKLHQRVPLFLGSK 312
Query: 344 EDVEELLAAIGEF 356
E+VE+L I EF
Sbjct: 313 EEVEKLERFIKEF 325
Score = 54.6 bits (132), Expect = 3e-08
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 353 IGEFVLSDYNIRVPSRGKIYSINEGYTSLWAPAIREYVDS 392
+GEF+L+ NIR+P +GKIY+INEG W +++Y+
Sbjct: 180 LGEFILTHENIRIPEKGKIYAINEGNQRHWEEGVKKYIKD 219
>gnl|CDD|215298 PLN02542, PLN02542, fructose-1,6-bisphosphatase.
Length = 412
Score = 254 bits (650), Expect = 4e-81
Identities = 148/379 (39%), Positives = 200/379 (52%), Gaps = 91/379 (24%)
Query: 13 TLTRFVLEQQKHIPNATGELTQLLVSIQTAVKAISSAVRKAGIAHLYGIAGNVNVQGEEV 72
TLT ++L+Q++ ELT +L SI A K I+S V++AGI++L G+ G VN+QGE+
Sbjct: 78 TLTTWLLKQEQA-GVIDAELTIVLSSISMACKQIASLVQRAGISNLTGVQGAVNIQGEDQ 136
Query: 73 KKLDVLSNELFVNMLTSSYSTCLLVSEENET--ALERSSLQLIIKKQTP----------- 119
KKLDV+SNE+F N L SS T ++ SEE + A+E S I P
Sbjct: 137 KKLDVISNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAV 196
Query: 120 ------GPVTPND----------------------ALQKGNEMVAGGYALYGSATMVVLS 151
G +PND Q G+ ++A GY +Y S+ + VL+
Sbjct: 197 STGSIFGIYSPNDECLADIGDDSTLDSVEQRCIVNVCQPGSNLLAAGYCMYSSSVIFVLT 256
Query: 152 VGKGQGVHGFMLDPVEVSKQGKYIVCFDPLDGSSNIDCLVSIGSIFSIFRIQSCVFLTVK 211
+G G V F LDP+
Sbjct: 257 IGTG--VFSFTLDPM--------------------------------------------- 269
Query: 212 AIGEFVLSDYNIRVPSRGKIYSINEGYTSLWAPAIREYVDSKKCPA-SGKPYGARYIGSM 270
GEFVL+ NI++P GKIYS NEG LW +++Y+D K P SGKPY ARYIGS+
Sbjct: 270 -YGEFVLTQENIQIPKAGKIYSFNEGNYQLWDDKLKKYIDDLKDPGPSGKPYSARYIGSL 328
Query: 271 VADVHRTLKYGGIFMYPATQDAPKGKLRLLYEGNPMAYIVQEAGGLASNGEISILDVQPT 330
V D HRTL YGGI+ YP + + GKLRLLYE PM++IV++AGG S+G ILD+QPT
Sbjct: 329 VGDFHRTLLYGGIYGYPRDKKSKNGKLRLLYECAPMSFIVEQAGGKGSDGHQRILDIQPT 388
Query: 331 SIHQRSPIFLGSKEDVEEL 349
IHQR P+++GS E+VE+L
Sbjct: 389 EIHQRVPLYIGSVEEVEKL 407
Score = 54.1 bits (130), Expect = 5e-08
Identities = 22/43 (51%), Positives = 29/43 (67%)
Query: 354 GEFVLSDYNIRVPSRGKIYSINEGYTSLWAPAIREYVDSKKCP 396
GEFVL+ NI++P GKIYS NEG LW +++Y+D K P
Sbjct: 271 GEFVLTQENIQIPKAGKIYSFNEGNYQLWDDKLKKYIDDLKDP 313
>gnl|CDD|215337 PLN02628, PLN02628, fructose-1,6-bisphosphatase family protein.
Length = 351
Score = 195 bits (498), Expect = 3e-59
Identities = 109/360 (30%), Positives = 168/360 (46%), Gaps = 91/360 (25%)
Query: 27 NATGELTQLLVSIQTAVKAISSAVRKAGIA----HLYGIAGNVNVQGEEVKKLDVLSNEL 82
N +L L+ IQ A K I++ + + G +G + K LD++SNE+
Sbjct: 30 NVGDDLVVLMAHIQAACKRIAALLASPFNSELGKTSSGASGASGSGRDAPKPLDIVSNEI 89
Query: 83 FVNMLTSSYSTCLLVSEEN-------------------------ETALERSSLQLIIKKQ 117
++ L +S ++ SEE+ + ++ ++ I +
Sbjct: 90 ILSSLRNSGKVAVMASEEDDAPIWIGDDGPYVVVFDPLDGSRNIDASIPTGTIFGIYNRL 149
Query: 118 TPGPVTPND------ALQKGNEMVAGGYALYGSATMVVLSVGKGQGVHGFMLDPVEVSKQ 171
P + LQ+G+ +VA GY LY SAT++ +S G G HGF LD
Sbjct: 150 VEADHLPVEEKAQLNVLQRGSRLVAAGYVLYSSATILCISFG--SGTHGFTLD------- 200
Query: 172 GKYIVCFDPLDGSSNIDCLVSIGSIFSIFRIQSCVFLTVKAIGEFVLSDYNIRVPSRGKI 231
+ GEFVL+ +I++P RG+I
Sbjct: 201 ---------------------------------------HSTGEFVLTHPDIKIPERGQI 221
Query: 232 YSINEGYTSLWAPAIREYVDSKKCPA--SGKPYGARYIGSMVADVHRTLKYGGIFMYPAT 289
YS+N+ W +R+Y+D+ + K Y ARYI S+VAD+HRT+ YGGI M P +
Sbjct: 222 YSVNDARYFDWPEGLRKYIDTVRQGKGQYPKKYSARYICSLVADLHRTILYGGIAMNPRS 281
Query: 290 QDAPKGKLRLLYEGNPMAYIVQEAGGLASNGEISILDVQPTSIHQRSPIFLGSKEDVEEL 349
LRL+YE NP++++V++AGG S+G+ IL +QP +HQR P+FLGS EDV EL
Sbjct: 282 H------LRLVYEANPLSFLVEQAGGRGSDGKRRILSIQPVKLHQRLPLFLGSSEDVLEL 335
Score = 52.1 bits (125), Expect = 2e-07
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 353 IGEFVLSDYNIRVPSRGKIYSINEGYTSLWAPAIREYVDS 392
GEFVL+ +I++P RG+IYS+N+ W +R+Y+D+
Sbjct: 203 TGEFVLTHPDIKIPERGQIYSVNDARYFDWPEGLRKYIDT 242
>gnl|CDD|215256 PLN02462, PLN02462, sedoheptulose-1,7-bisphosphatase.
Length = 304
Score = 102 bits (255), Expect = 2e-24
Identities = 87/358 (24%), Positives = 133/358 (37%), Gaps = 116/358 (32%)
Query: 31 ELTQLLVSIQTAVKAISSAVRKAGIAHLYGIAGNVNVQGEEVKKLDVLSNELFVNMLTSS 90
+L +L++ + A + I+ VR A VN G+E +D+L+++L L S
Sbjct: 14 KLRRLIMCMGEACRTIAFKVRTA----SCTGTACVNSFGDEQLAVDMLADKLLFEALKYS 69
Query: 91 YSTCLLVSEENETALERSSLQLIIKKQTPGPVTPNDALQKGNEMVAGGYALYGSATMVVL 150
+ SEE P +Q V GG++
Sbjct: 70 HVCKYACSEE----------------------VPE--VQDMGGPVEGGFS---------- 95
Query: 151 SVGKGQGVHGFMLDPVEVSKQGKYIVCFDPLDGSSNIDCLVSIGSIF------------- 197
V FDPLDGSS +D ++G+IF
Sbjct: 96 -------------------------VAFDPLDGSSIVDTNFAVGTIFGVWPGDKLTGVTG 130
Query: 198 --------SIFRIQSCVFLTVKAIG---EFVLSDYNIRVPSRGKIYSINEGYTSLWAPA- 245
I+ ++ + +K EF+L D + I EG +++P
Sbjct: 131 RDQVAAAMGIYGPRTTYVVALKDGPGTHEFLLLDDGKWQHVKETT-EIGEG--KIFSPGN 187
Query: 246 -------------IREYVDSKKCPASGKPYGARYIGSMVADV-HRTLKYGGIFMYPATQD 291
I YV K Y RY G MV DV +K G+F T
Sbjct: 188 LRATFDNPGYEKLINYYVSEK--------YTLRYTGGMVPDVYQIIVKEKGVFTNV-TSP 238
Query: 292 APKGKLRLLYEGNPMAYIVQEAGGLASNG--EISILDVQPTSIHQRSPIFLGSKEDVE 347
K KLRLL+E P+ +V++AGG +S+G S+LD Q ++ QR+ + GSK +V
Sbjct: 239 KSKAKLRLLFEVAPLGLLVEKAGGKSSDGVQGGSVLDKQINNLDQRTQVAYGSKNEVI 296
>gnl|CDD|238814 cd01636, FIG, FIG, FBPase/IMPase/glpX-like domain. A superfamily of
metal-dependent phosphatases with various substrates.
Fructose-1,6-bisphospatase (both the major and the
glpX-encoded variant) hydrolyze
fructose-1,6,-bisphosphate to fructose-6-phosphate in
gluconeogenesis. Inositol-monophosphatases and inositol
polyphosphatases play vital roles in eukaryotic
signalling, as they participate in metabolizing the
messenger molecule Inositol-1,4,5-triphosphate. Many of
these enzymes are inhibited by Li+.
Length = 184
Score = 55.5 bits (134), Expect = 3e-09
Identities = 21/76 (27%), Positives = 29/76 (38%)
Query: 36 LVSIQTAVKAISSAVRKAGIAHLYGIAGNVNVQGEEVKKLDVLSNELFVNMLTSSYSTCL 95
L + K A+ KA L G + V DV + L NML SS+
Sbjct: 1 LEELCRVAKEAGLAILKAFGRELSGKVKITKSDNDPVTTADVAAETLIRNMLKSSFPDVK 60
Query: 96 LVSEENETALERSSLQ 111
+V EE+ A E +
Sbjct: 61 IVGEESGVAEEVMGRR 76
Score = 55.5 bits (134), Expect = 4e-09
Identities = 29/153 (18%), Positives = 51/153 (33%), Gaps = 45/153 (29%)
Query: 170 KQGKYIVCFDPLDGSSNID-CLVSIGSIFSIFRIQSCVFLTVKAIGEFVLSDYNIRVPSR 228
++ +Y DP+DG+ N L + + +++ I
Sbjct: 75 RRDEYTWVIDPIDGTKNFINGLPFVAVVIAVYVI-------------------------- 108
Query: 229 GKIYSINEGYTSLWAPAIREYVDSKKCPASGKPYGARYIGSMVADVHRTLK-YGGIFMYP 287
L P+ + + K Y R +GS VA + I+ P
Sbjct: 109 ----------LILAEPSHKRVDEKKAELQLLAVYRIRIVGSAVAKMCLVALGLADIYYEP 158
Query: 288 ATQDAPKGKLRLLYEGNPMAYIVQEAGGLASNG 320
GK R ++ A IV+EAGG+ ++
Sbjct: 159 G------GKRRA-WDVAASAAIVREAGGIMTDW 184
>gnl|CDD|238815 cd01637, IMPase_like, Inositol-monophosphatase-like domains. This
family of phosphatases is dependent on bivalent metal
ions such as Mg++, and many members are inhibited by Li+
(which is thought to displace a bivalent ion in the
active site). Substrates include
fructose-1,6-bisphosphate, inositol poly- and
monophosphates, PAP and PAPS,
sedoheptulose-1,7-bisphosphate and probably others.
Length = 238
Score = 39.6 bits (93), Expect = 0.001
Identities = 25/167 (14%), Positives = 47/167 (28%), Gaps = 29/167 (17%)
Query: 164 DPVEVSKQGKYIVCFDPLDGSSN-IDCLVSIGSIFSIFRIQ-------SCVFLT-----V 210
G + DP+DG++N + L + +++ L
Sbjct: 65 GGSGNVSDGGRVWVIDPIDGTTNFVAGLPNFAVSIALYEDGKPVLGVIYDPMLDELYYAG 124
Query: 211 KAIGEFVLSDYNIRVPSRGKIYSINEGYTSLWAPAIREYVDSKKCPASGKPYGARYIGSM 270
+ G F L+ + + + + + R V + G R GS
Sbjct: 125 RGKGAF-LNGKKLPLSKDTPLNDALLSTNASMLRSNRAAVLASLVNR---ALGIRIYGSA 180
Query: 271 VADVHRTL--KYGGIFMYPATQDAPKGKLRLLYEGNPMAYIVQEAGG 315
D+ + ++ A IV+EAGG
Sbjct: 181 GLDLAYVAAGRLDAYLSS----------GLNPWDYAAGALIVEEAGG 217
Score = 36.9 bits (86), Expect = 0.010
Identities = 13/62 (20%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 39 IQTAVKAISSAVRKAGIAHLYGIAGNVNVQGEEVKKLDVLSNELFVNMLTSSYSTCLLVS 98
AV+ + + +A L + G+ V + D+ + EL V++L + + ++
Sbjct: 4 ALKAVREAGALILEAFGEELTVETKKGD--GDLVTEADLAAEELIVDVLKALFPDDGILG 61
Query: 99 EE 100
EE
Sbjct: 62 EE 63
>gnl|CDD|223559 COG0483, SuhB, Archaeal fructose-1,6-bisphosphatase and related
enzymes of inositol monophosphatase family [Carbohydrate
transport and metabolism].
Length = 260
Score = 30.8 bits (70), Expect = 0.98
Identities = 45/214 (21%), Positives = 74/214 (34%), Gaps = 52/214 (24%)
Query: 166 VEVSKQGKYIVCFDPLDGSSN-IDCL----VSI----------GSIFSIFRIQSCVFLTV 210
+ +Y+ DP+DG++N + + VSI G I+ + ++
Sbjct: 72 GALGGGDEYVWVIDPIDGTTNFVRGIPFFAVSIALVEDGEPVAGVIYDPATGE--LYTAA 129
Query: 211 KAIGEFVLSDYNIRVPSRGK----IYSINEGYTSLWAPAIREYVDSKKCPASGKPYGARY 266
K G + L+ I+V R + SL + +K K R
Sbjct: 130 KGKGAY-LNGRRIKVSLRTSLNASLLGTGFPGKSLARFPAYLNILAKL---LRKVRRVRR 185
Query: 267 IGSMVADVHRTLKYGGIFMYPATQDAPKGKLRLLYEGNPMAY-------IVQEAGGLASN 319
GS D Y A G+L E + IV+EAGG+ ++
Sbjct: 186 YGSAALD----------LAYVA-----AGRLDGFVEFGLRPWDIAAGVLIVREAGGIVTD 230
Query: 320 GEISILDVQPTSIHQRSPIFLGSKEDVEELLAAI 353
LD P + I G+ + +ELL A+
Sbjct: 231 -----LDGGPLDPNSGGSIVAGNPKLHDELLEAL 259
>gnl|CDD|187811 cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10.
CRISPR (Clustered Regularly Interspaced Short
Palindromic Repeats) and associated Cas proteins
comprise a system for heritable host defense by
prokaryotic cells against phage and other foreign DNA;
Multidomain protein with permuted HD nuclease domain,
palm domain and Zn-ribbon; signature gene for type III;
also known as Csm1 family.
Length = 650
Score = 29.2 bits (66), Expect = 4.4
Identities = 21/92 (22%), Positives = 35/92 (38%), Gaps = 5/92 (5%)
Query: 296 KLRLLYEGNPMAYIVQEAGGLASNGEISILDVQPTSIHQRSP---IF--LGSKEDVEELL 350
LL +P+AYIV A +A++ E + + + P IF + E +
Sbjct: 57 AKALLENHHPLAYIVYIADNIAASVERREGEEEGEGFDKERPLHSIFNVININEKKKNYK 116
Query: 351 AAIGEFVLSDYNIRVPSRGKIYSINEGYTSLW 382
+ L N +P KI + Y L+
Sbjct: 117 PKKLAYSLKPLNPEIPPSEKIKASQSDYKELY 148
>gnl|CDD|99979 cd03807, GT1_WbnK_like, This family is most closely related to the
GT1 family of glycosyltransferases. WbnK in Shigella
dysenteriae has been shown to be involved in the type 7
O-antigen biosynthesis.
Length = 365
Score = 28.7 bits (65), Expect = 5.0
Identities = 12/22 (54%), Positives = 14/22 (63%)
Query: 338 IFLGSKEDVEELLAAIGEFVLS 359
I LG + DV LL A+ FVLS
Sbjct: 254 ILLGERSDVPALLNALDVFVLS 275
>gnl|CDD|227173 COG4836, COG4836, Predicted membrane protein [Function unknown].
Length = 77
Score = 26.7 bits (59), Expect = 5.4
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Query: 127 ALQKGN--EMVAGGYALYGSATMVVLSVGKGQGVHGFMLDPVEVSKQGKYI 175
ALQ N + + G M+ +++ G V F LD + SKQ Y+
Sbjct: 25 ALQSINYDKFIKKGKVTQARLLMIFVTIALGYAVSNFFLDYLAYSKQLIYL 75
>gnl|CDD|223222 COG0144, Sun, tRNA and rRNA cytosine-C5-methylases [Translation,
ribosomal structure and biogenesis].
Length = 355
Score = 28.1 bits (63), Expect = 8.0
Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 4/22 (18%)
Query: 91 YSTCLLVSEENE----TALERS 108
YSTC L EENE LER
Sbjct: 286 YSTCSLTPEENEEVVERFLERH 307
>gnl|CDD|177245 MTH00199, ND2, NADH dehydrogenase subunit 2; Provisional.
Length = 460
Score = 28.4 bits (64), Expect = 8.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 45 AISSAVRKAGIAHLYGIAGNVNVQG 69
A+SS + G A LYG+ G ++QG
Sbjct: 158 AVSSGLFLFGCALLYGLTGETSIQG 182
>gnl|CDD|238820 cd01642, Arch_FBPase_2, Putative fructose-1,6-bisphosphatase or
related enzymes of inositol monophosphatase family.
These are Mg++ dependent phosphatases. Members in this
family may have fructose-1,6-bisphosphatase and/or
inositol-monophosphatase activity.
Fructose-1,6-bisphosphatase catalyzes the hydrolysis of
fructose-1,6-biphosphate into fructose-6-phosphate and
is critical in gluconeogenesis pathway.
Length = 244
Score = 27.8 bits (62), Expect = 9.2
Identities = 11/32 (34%), Positives = 14/32 (43%), Gaps = 4/32 (12%)
Query: 159 HGFMLDPVE----VSKQGKYIVCFDPLDGSSN 186
+ E G+YI DPLDGS+N
Sbjct: 56 VFGQIISEESGEIRKGSGEYIAVLDPLDGSTN 87
>gnl|CDD|234225 TIGR03480, HpnN, hopanoid biosynthesis associated RND transporter
like protein HpnN. The genomes containing members of
this family share the machinery for the biosynthesis of
hopanoid lipids. Furthermore, the genes of this family
are usually located proximal to other components of this
biological process. The proteins appear to be related to
the RND family of export proteins, particularly the
hydrophobe/amphiphile efflux-3 (HAE3) family represented
by TIGR00921.
Length = 862
Score = 28.4 bits (64), Expect = 9.3
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Query: 13 TLTRFVLEQQKHIPNATGELTQLLVSIQTAVKAISSAVRKAGIAHLYGIA 62
L RFV +K P+ATG VSI + + A +A I L I
Sbjct: 681 ALRRFVRAVRKVAPDATGA----PVSILESGDTVVGAFLQAFIYALVAIT 726
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.316 0.134 0.385
Gapped
Lambda K H
0.267 0.0849 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 20,010,749
Number of extensions: 1943267
Number of successful extensions: 1687
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1667
Number of HSP's successfully gapped: 61
Length of query: 400
Length of database: 10,937,602
Length adjustment: 99
Effective length of query: 301
Effective length of database: 6,546,556
Effective search space: 1970513356
Effective search space used: 1970513356
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (26.7 bits)