Query psy7457
Match_columns 497
No_of_seqs 238 out of 805
Neff 5.3
Searched_HMMs 29240
Date Fri Aug 16 18:48:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7457.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7457hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w3b_A UDP-N-acetylglucosamine 99.5 7.1E-12 2.4E-16 124.0 23.7 132 9-168 31-162 (388)
2 3hym_B Cell division cycle pro 99.5 4E-12 1.4E-16 120.5 20.7 203 51-314 113-316 (330)
3 3ieg_A DNAJ homolog subfamily 99.4 2.8E-12 9.5E-17 122.4 18.2 308 10-398 2-348 (359)
4 1fch_A Peroxisomal targeting s 99.4 2.4E-12 8.2E-17 124.9 17.7 219 57-317 92-345 (368)
5 4eqf_A PEX5-related protein; a 99.4 2.2E-12 7.5E-17 126.3 14.6 196 58-319 94-298 (365)
6 3ieg_A DNAJ homolog subfamily 99.4 1.4E-11 4.7E-16 117.6 19.3 254 9-319 35-323 (359)
7 3cv0_A Peroxisome targeting si 99.4 4.1E-12 1.4E-16 120.3 15.6 248 8-316 18-300 (327)
8 2pl2_A Hypothetical conserved 99.4 7E-12 2.4E-16 116.7 16.5 189 60-319 2-202 (217)
9 2y4t_A DNAJ homolog subfamily 99.4 7.6E-12 2.6E-16 125.1 17.4 307 9-397 24-370 (450)
10 3hym_B Cell division cycle pro 99.4 2.9E-11 1E-15 114.5 19.7 247 9-319 20-287 (330)
11 1w3b_A UDP-N-acetylglucosamine 99.4 2.6E-11 8.9E-16 119.9 19.8 192 55-316 93-285 (388)
12 1dcu_A Fructose-1,6-bisphospha 99.4 4.1E-13 1.4E-17 138.5 6.2 91 403-496 16-126 (357)
13 2pl2_A Hypothetical conserved 99.4 5.5E-12 1.9E-16 117.4 13.2 197 9-293 3-211 (217)
14 4eqf_A PEX5-related protein; a 99.4 1.6E-12 5.4E-17 127.3 9.7 211 47-319 117-344 (365)
15 2xpi_A Anaphase-promoting comp 99.3 2.2E-11 7.4E-16 126.6 17.7 251 59-398 335-592 (597)
16 2fhy_A Fructose-1,6-bisphospha 99.3 5.6E-13 1.9E-17 138.3 5.5 109 385-496 27-155 (374)
17 2q7f_A YRRB protein; TPR, prot 99.3 3.1E-11 1.1E-15 109.9 16.1 214 10-311 22-236 (243)
18 1fch_A Peroxisomal targeting s 99.3 5.8E-11 2E-15 115.1 18.0 250 29-317 38-300 (368)
19 3qky_A Outer membrane assembly 99.3 1.1E-10 3.7E-15 110.1 17.9 207 57-321 9-251 (261)
20 2ho1_A Type 4 fimbrial biogene 99.3 1.7E-10 5.8E-15 106.4 18.3 195 56-318 29-225 (252)
21 3uq3_A Heat shock protein STI1 99.3 4.1E-11 1.4E-15 109.5 14.0 217 10-318 4-223 (258)
22 2vq2_A PILW, putative fimbrial 99.3 1.7E-10 5.8E-15 103.1 17.7 192 58-316 3-196 (225)
23 2y4t_A DNAJ homolog subfamily 99.3 9.2E-11 3.1E-15 117.2 17.3 212 28-316 155-377 (450)
24 3uks_A Sedoheptulose-1,7 bisph 99.3 3.4E-12 1.2E-16 130.7 6.2 84 404-496 23-124 (347)
25 2xpi_A Anaphase-promoting comp 99.2 2.8E-10 9.5E-15 118.2 19.9 237 9-319 303-567 (597)
26 3vtx_A MAMA; tetratricopeptide 99.2 3.5E-10 1.2E-14 100.3 17.4 169 61-298 3-172 (184)
27 3u4t_A TPR repeat-containing p 99.2 1.7E-09 5.8E-14 100.6 21.5 259 62-399 2-264 (272)
28 3u4t_A TPR repeat-containing p 99.2 1.2E-10 4E-15 108.5 13.3 225 10-319 2-238 (272)
29 2ho1_A Type 4 fimbrial biogene 99.2 6.7E-10 2.3E-14 102.4 17.6 203 11-300 37-242 (252)
30 4abn_A Tetratricopeptide repea 99.2 1.5E-10 5.3E-15 121.1 14.7 199 51-319 90-309 (474)
31 3fp2_A TPR repeat-containing p 99.2 2.7E-10 9.3E-15 116.2 16.0 100 11-137 25-124 (537)
32 3fp2_A TPR repeat-containing p 99.2 3.7E-10 1.3E-14 115.2 16.9 212 29-318 256-478 (537)
33 2gw1_A Mitochondrial precursor 99.2 2.1E-10 7.3E-15 115.7 14.8 209 30-319 251-466 (514)
34 1xnf_A Lipoprotein NLPI; TPR, 99.2 6.4E-10 2.2E-14 103.1 16.5 189 55-319 69-263 (275)
35 4i17_A Hypothetical protein; T 99.2 4.4E-10 1.5E-14 103.3 15.1 210 60-312 4-224 (228)
36 2q7f_A YRRB protein; TPR, prot 99.2 2.9E-10 9.9E-15 103.4 13.1 188 62-319 22-210 (243)
37 2vq2_A PILW, putative fimbrial 99.1 8E-10 2.7E-14 98.7 15.2 206 9-299 6-214 (225)
38 3vtx_A MAMA; tetratricopeptide 99.1 6.8E-10 2.3E-14 98.4 13.5 169 9-237 3-172 (184)
39 2gw1_A Mitochondrial precursor 99.1 1.4E-09 4.9E-14 109.7 17.4 197 48-308 289-489 (514)
40 2h6f_A Protein farnesyltransfe 99.1 1.5E-09 5.1E-14 111.9 17.0 203 30-316 111-323 (382)
41 3cv0_A Peroxisome targeting si 99.1 2.6E-09 8.8E-14 101.0 16.3 223 61-316 19-254 (327)
42 1xnf_A Lipoprotein NLPI; TPR, 99.1 3.7E-10 1.3E-14 104.7 10.1 213 27-319 16-232 (275)
43 3uq3_A Heat shock protein STI1 99.1 7.5E-09 2.6E-13 94.4 17.7 240 61-398 3-255 (258)
44 2ond_A Cleavage stimulation fa 99.1 3.5E-09 1.2E-13 103.2 16.5 225 11-318 8-257 (308)
45 3as5_A MAMA; tetratricopeptide 99.0 3.8E-09 1.3E-13 91.0 14.2 169 60-297 5-174 (186)
46 1ouv_A Conserved hypothetical 99.0 2.3E-08 7.7E-13 94.3 19.0 206 9-314 4-230 (273)
47 3nf1_A KLC 1, kinesin light ch 99.0 1.3E-09 4.4E-14 102.3 10.3 188 55-295 19-223 (311)
48 3ro2_A PINS homolog, G-protein 99.0 3.1E-09 1.1E-13 99.5 12.8 248 26-317 15-318 (338)
49 4gyw_A UDP-N-acetylglucosamine 99.0 2.9E-09 9.8E-14 118.8 14.6 170 57-295 3-173 (723)
50 3mkr_A Coatomer subunit epsilo 99.0 8.2E-09 2.8E-13 101.2 14.9 184 58-317 60-249 (291)
51 3edt_B KLC 2, kinesin light ch 99.0 4.1E-09 1.4E-13 96.9 11.9 235 26-296 11-281 (283)
52 2h6f_A Protein farnesyltransfe 99.0 1.2E-08 3.9E-13 105.2 16.5 198 47-314 150-365 (382)
53 2ond_A Cleavage stimulation fa 98.9 2E-08 7E-13 97.8 16.6 212 8-298 47-272 (308)
54 3sf4_A G-protein-signaling mod 98.9 6.4E-09 2.2E-13 101.3 12.5 245 28-316 21-321 (406)
55 3qky_A Outer membrane assembly 98.9 8E-09 2.7E-13 97.2 12.7 174 8-233 12-221 (261)
56 1qqe_A Vesicular transport pro 98.9 1E-08 3.4E-13 99.6 12.8 226 29-314 50-286 (292)
57 4a1s_A PINS, partner of inscut 98.9 1.1E-08 3.9E-13 101.0 13.1 248 27-317 59-358 (411)
58 4abn_A Tetratricopeptide repea 98.9 6.6E-09 2.2E-13 108.7 11.7 177 47-293 121-318 (474)
59 2pzi_A Probable serine/threoni 98.9 3.1E-08 1.1E-12 108.6 16.9 185 57-315 388-581 (681)
60 3sf4_A G-protein-signaling mod 98.8 8.8E-09 3E-13 100.3 10.4 253 28-318 59-363 (406)
61 4i17_A Hypothetical protein; T 98.8 5.8E-09 2E-13 95.8 8.4 137 7-169 3-145 (228)
62 2yhc_A BAMD, UPF0169 lipoprote 98.8 1.4E-07 4.8E-12 87.6 17.7 178 62-299 3-216 (225)
63 3nf1_A KLC 1, kinesin light ch 98.8 1.9E-08 6.6E-13 94.2 11.4 232 28-295 39-306 (311)
64 2gq1_A Fructose-1,6-bisphospha 98.8 2.6E-09 8.7E-14 109.3 5.7 88 407-496 3-110 (332)
65 3as5_A MAMA; tetratricopeptide 98.8 8.5E-08 2.9E-12 82.4 14.1 163 11-233 8-170 (186)
66 3urz_A Uncharacterized protein 98.8 6.3E-08 2.1E-12 89.3 13.9 173 62-299 3-189 (208)
67 4a1s_A PINS, partner of inscut 98.8 4.6E-08 1.6E-12 96.6 13.4 226 59-316 44-317 (411)
68 4gyw_A UDP-N-acetylglucosamine 98.8 4.2E-08 1.4E-12 109.4 14.5 166 8-233 6-171 (723)
69 2r5s_A Uncharacterized protein 98.8 6.3E-09 2.2E-13 93.0 6.1 170 58-295 1-172 (176)
70 1ouv_A Conserved hypothetical 98.7 5.4E-07 1.8E-11 84.8 18.5 176 59-314 2-194 (273)
71 3ulq_A Response regulator aspa 98.7 6.4E-08 2.2E-12 96.2 12.0 175 23-233 110-290 (383)
72 2pzi_A Probable serine/threoni 98.7 2.6E-08 8.8E-13 109.3 9.9 168 57-294 427-603 (681)
73 3ro2_A PINS homolog, G-protein 98.7 3.2E-07 1.1E-11 85.7 15.8 103 63-169 5-111 (338)
74 3mkr_A Coatomer subunit epsilo 98.7 1.3E-07 4.4E-12 92.6 13.2 170 59-300 97-268 (291)
75 2yhc_A BAMD, UPF0169 lipoprote 98.7 1.1E-07 3.7E-12 88.4 12.1 180 10-238 3-216 (225)
76 3qou_A Protein YBBN; thioredox 98.7 6.7E-08 2.3E-12 94.0 11.1 183 42-295 99-283 (287)
77 3gyz_A Chaperone protein IPGC; 98.7 1.5E-07 5E-12 84.6 12.1 107 53-169 26-132 (151)
78 4gco_A Protein STI-1; structur 98.7 1.8E-07 6.1E-12 80.4 12.0 105 55-169 5-109 (126)
79 3q15_A PSP28, response regulat 98.7 2.9E-07 9.8E-12 91.7 14.9 232 26-295 111-364 (378)
80 3ulq_A Response regulator aspa 98.7 2.5E-08 8.5E-13 99.1 7.1 207 28-296 155-368 (383)
81 2xcb_A PCRH, regulatory protei 98.7 1.8E-07 6.3E-12 80.7 11.7 108 52-169 7-114 (142)
82 2kck_A TPR repeat; tetratricop 98.7 9.2E-08 3.1E-12 76.0 9.0 103 59-169 2-105 (112)
83 4g1t_A Interferon-induced prot 98.6 1.1E-06 3.7E-11 88.6 18.5 140 52-233 198-360 (472)
84 2lni_A Stress-induced-phosphop 98.6 6.2E-07 2.1E-11 73.5 13.6 103 57-169 10-112 (133)
85 2vgx_A Chaperone SYCD; alterna 98.6 2.9E-07 9.8E-12 81.1 12.2 109 51-169 9-117 (148)
86 1nuw_A Fructose-1,6-bisphospha 98.6 2.1E-08 7.2E-13 102.6 5.5 96 398-496 3-118 (337)
87 1a17_A Serine/threonine protei 98.6 2.3E-07 7.9E-12 79.3 11.2 135 9-169 11-145 (166)
88 1qqe_A Vesicular transport pro 98.6 1.2E-06 4E-11 84.9 17.3 195 70-313 44-249 (292)
89 2vyi_A SGTA protein; chaperone 98.6 5.7E-07 1.9E-11 72.9 12.6 103 57-169 6-108 (131)
90 3qou_A Protein YBBN; thioredox 98.6 6.7E-07 2.3E-11 86.9 14.6 162 90-318 108-271 (287)
91 4g1t_A Interferon-induced prot 98.6 5.5E-07 1.9E-11 90.7 14.2 215 31-312 153-381 (472)
92 3edt_B KLC 2, kinesin light ch 98.6 1.4E-07 4.9E-12 86.6 8.7 185 76-314 14-224 (283)
93 2vsy_A XCC0866; transferase, g 98.5 6.1E-07 2.1E-11 94.7 13.8 156 31-241 4-163 (568)
94 4ga2_A E3 SUMO-protein ligase 98.5 3E-07 1E-11 80.8 9.1 108 51-168 19-127 (150)
95 1na0_A Designed protein CTPR3; 98.5 2.8E-06 9.7E-11 68.2 14.1 102 58-169 3-105 (125)
96 2ooe_A Cleavage stimulation fa 98.5 1.6E-06 5.4E-11 90.6 15.3 211 9-297 270-493 (530)
97 3q15_A PSP28, response regulat 98.5 9.6E-07 3.3E-11 87.9 13.1 178 63-296 101-290 (378)
98 3q49_B STIP1 homology and U bo 98.5 2.2E-06 7.4E-11 71.6 12.9 102 58-169 4-105 (137)
99 2fo7_A Synthetic consensus TPR 98.5 2.1E-06 7.2E-11 69.3 12.3 117 30-169 15-131 (136)
100 3sz7_A HSC70 cochaperone (SGT) 98.5 1.6E-06 5.3E-11 76.1 12.4 102 58-169 6-107 (164)
101 3upv_A Heat shock protein STI1 98.5 1.8E-06 6.1E-11 72.0 12.2 100 60-169 1-100 (126)
102 4ga2_A E3 SUMO-protein ligase 98.5 3.3E-07 1.1E-11 80.6 8.0 118 10-155 30-148 (150)
103 3sz7_A HSC70 cochaperone (SGT) 98.5 9.1E-07 3.1E-11 77.6 10.6 111 4-140 4-114 (164)
104 2e2e_A Formate-dependent nitri 98.5 9.4E-07 3.2E-11 77.9 10.8 107 53-169 34-143 (177)
105 2lni_A Stress-induced-phosphop 98.5 1.5E-06 5.3E-11 71.1 11.3 122 6-155 11-132 (133)
106 3gyz_A Chaperone protein IPGC; 98.4 4.3E-07 1.5E-11 81.5 8.3 103 10-138 35-137 (151)
107 2vyi_A SGTA protein; chaperone 98.4 8.3E-07 2.8E-11 71.9 8.9 123 7-157 8-130 (131)
108 2fo7_A Synthetic consensus TPR 98.4 5.1E-06 1.7E-10 67.0 13.5 128 64-233 2-129 (136)
109 2vgx_A Chaperone SYCD; alterna 98.4 1.2E-06 4.1E-11 77.1 10.5 105 11-141 21-125 (148)
110 2dba_A Smooth muscle cell asso 98.4 2.5E-06 8.5E-11 71.4 11.8 107 56-169 21-127 (148)
111 1xi4_A Clathrin heavy chain; a 98.4 4.2E-06 1.4E-10 99.1 16.7 234 28-347 997-1266(1630)
112 4gco_A Protein STI-1; structur 98.4 7.5E-07 2.6E-11 76.4 7.9 106 7-138 6-114 (126)
113 2xcb_A PCRH, regulatory protei 98.4 1.8E-06 6.3E-11 74.3 10.3 105 11-141 18-122 (142)
114 2ifu_A Gamma-SNAP; membrane fu 98.4 5.9E-06 2E-10 80.5 15.1 184 66-300 38-228 (307)
115 4f3v_A ESX-1 secretion system 98.4 1.4E-07 4.7E-12 94.6 3.4 215 19-310 9-249 (282)
116 1elw_A TPR1-domain of HOP; HOP 98.4 5.4E-06 1.9E-10 66.0 12.2 98 62-169 3-100 (118)
117 1hh8_A P67PHOX, NCF-2, neutrop 98.4 3.3E-06 1.1E-10 75.9 12.1 130 11-169 6-149 (213)
118 3urz_A Uncharacterized protein 98.3 1.7E-06 5.8E-11 79.6 9.9 166 11-237 4-188 (208)
119 2ooe_A Cleavage stimulation fa 98.3 6.1E-06 2.1E-10 86.1 15.2 201 51-317 260-478 (530)
120 2qfc_A PLCR protein; TPR, HTH, 98.3 4.9E-06 1.7E-10 80.1 12.9 188 58-294 70-264 (293)
121 2vsy_A XCC0866; transferase, g 98.3 5.1E-06 1.7E-10 87.7 13.9 133 9-169 21-156 (568)
122 2xm6_A Protein corresponding t 98.3 7.3E-05 2.5E-09 77.2 22.1 130 9-168 37-178 (490)
123 1hxi_A PEX5, peroxisome target 98.3 5.2E-06 1.8E-10 70.5 11.2 97 63-169 17-113 (121)
124 3q49_B STIP1 homology and U bo 98.3 4.3E-06 1.5E-10 69.8 10.3 105 7-137 5-109 (137)
125 1elr_A TPR2A-domain of HOP; HO 98.3 6.8E-06 2.3E-10 66.6 11.2 102 60-169 1-107 (131)
126 2xm6_A Protein corresponding t 98.3 7.1E-05 2.4E-09 77.3 21.3 261 9-314 73-375 (490)
127 3upv_A Heat shock protein STI1 98.2 2.5E-06 8.5E-11 71.1 8.0 102 10-137 3-104 (126)
128 2kck_A TPR repeat; tetratricop 98.2 9.3E-07 3.2E-11 70.1 5.0 104 9-138 4-110 (112)
129 2r5s_A Uncharacterized protein 98.2 8.1E-06 2.8E-10 72.6 11.7 78 83-166 92-169 (176)
130 3u3w_A Transcriptional activat 98.2 8.6E-06 2.9E-10 78.4 12.7 185 61-294 73-264 (293)
131 2kat_A Uncharacterized protein 98.2 8.3E-06 2.8E-10 67.1 10.9 84 51-142 7-90 (115)
132 2xev_A YBGF; tetratricopeptide 98.2 2.2E-05 7.7E-10 64.6 13.3 100 65-169 4-104 (129)
133 1p5q_A FKBP52, FK506-binding p 98.2 2.8E-06 9.4E-11 84.8 8.8 137 53-226 137-283 (336)
134 4gcn_A Protein STI-1; structur 98.2 2.7E-06 9.2E-11 72.8 7.3 102 29-149 21-124 (127)
135 1hxi_A PEX5, peroxisome target 98.2 1.3E-06 4.5E-11 74.2 5.3 101 12-138 18-118 (121)
136 1hz4_A MALT regulatory protein 98.2 4.6E-05 1.6E-09 74.7 17.0 181 64-296 15-203 (373)
137 3ma5_A Tetratricopeptide repea 98.2 8.5E-06 2.9E-10 66.6 9.8 85 58-150 2-86 (100)
138 1elw_A TPR1-domain of HOP; HOP 98.2 4.2E-06 1.4E-10 66.6 7.6 103 10-138 3-105 (118)
139 1p5q_A FKBP52, FK506-binding p 98.2 9E-06 3.1E-10 81.1 11.5 126 10-163 146-286 (336)
140 3k9i_A BH0479 protein; putativ 98.1 3.6E-06 1.2E-10 70.1 6.7 91 30-138 4-94 (117)
141 2e2e_A Formate-dependent nitri 98.1 1.6E-05 5.5E-10 69.9 11.2 106 9-140 42-150 (177)
142 1hh8_A P67PHOX, NCF-2, neutrop 98.1 7.7E-05 2.6E-09 66.8 15.8 94 63-169 6-99 (213)
143 1elr_A TPR2A-domain of HOP; HO 98.1 6.6E-06 2.3E-10 66.7 7.1 119 10-152 3-123 (131)
144 1hz4_A MALT regulatory protein 98.1 6.6E-05 2.3E-09 73.6 15.1 186 60-296 132-322 (373)
145 1a17_A Serine/threonine protei 98.0 4.5E-05 1.5E-09 64.9 12.0 98 62-169 12-109 (166)
146 4gcn_A Protein STI-1; structur 98.0 3.2E-05 1.1E-09 66.0 10.8 97 64-168 9-110 (127)
147 2dba_A Smooth muscle cell asso 98.0 2E-05 6.8E-10 65.8 9.2 105 8-138 25-132 (148)
148 1na0_A Designed protein CTPR3; 98.0 4.2E-05 1.4E-09 61.2 10.7 115 11-153 9-123 (125)
149 1na3_A Designed protein CTPR2; 98.0 4E-05 1.4E-09 59.2 10.2 87 58-154 4-90 (91)
150 2c2l_A CHIP, carboxy terminus 98.0 2.9E-05 9.8E-10 75.2 11.4 100 60-169 1-100 (281)
151 2ifu_A Gamma-SNAP; membrane fu 98.0 1.8E-05 6.2E-10 77.1 9.4 167 29-232 49-220 (307)
152 3ro3_A PINS homolog, G-protein 98.0 2.8E-05 9.7E-10 64.6 9.2 138 22-169 15-157 (164)
153 2xev_A YBGF; tetratricopeptide 98.0 1E-05 3.4E-10 66.8 6.3 105 11-138 2-109 (129)
154 2fbn_A 70 kDa peptidylprolyl i 98.0 1.3E-05 4.4E-10 72.3 7.4 122 12-161 39-176 (198)
155 1kt0_A FKBP51, 51 kDa FK506-bi 98.0 1.8E-05 6E-10 82.5 9.3 143 11-168 268-412 (457)
156 1ihg_A Cyclophilin 40; ppiase 97.9 2.5E-05 8.5E-10 79.6 9.7 125 29-163 236-363 (370)
157 1wao_1 Serine/threonine protei 97.9 1.9E-05 6.6E-10 83.0 9.0 105 52-166 29-135 (477)
158 3gw4_A Uncharacterized protein 97.9 0.00013 4.5E-09 64.3 12.7 170 75-297 4-177 (203)
159 3gw4_A Uncharacterized protein 97.9 2.9E-05 9.9E-10 68.5 8.4 132 28-169 38-175 (203)
160 2c2l_A CHIP, carboxy terminus 97.9 2.7E-05 9.4E-10 75.4 8.9 103 10-138 3-105 (281)
161 1kt0_A FKBP51, 51 kDa FK506-bi 97.9 2.7E-05 9.3E-10 81.1 9.1 137 54-227 259-405 (457)
162 4b4t_Q 26S proteasome regulato 97.9 0.0001 3.5E-09 73.2 13.0 179 65-296 6-204 (434)
163 2fbn_A 70 kDa peptidylprolyl i 97.9 0.0001 3.5E-09 66.4 11.7 132 59-227 34-176 (198)
164 3u3w_A Transcriptional activat 97.8 0.0002 6.7E-09 68.8 13.4 167 104-316 74-250 (293)
165 2l6j_A TPR repeat-containing p 97.8 2.9E-05 9.9E-10 62.1 6.2 71 62-140 3-73 (111)
166 1xi4_A Clathrin heavy chain; a 97.8 0.00074 2.5E-08 80.3 19.8 214 63-314 1105-1326(1630)
167 3k9i_A BH0479 protein; putativ 97.8 4.5E-05 1.5E-09 63.3 7.1 88 75-169 2-89 (117)
168 3rkv_A Putative peptidylprolyl 97.8 5.4E-05 1.8E-09 66.0 7.5 119 7-138 7-130 (162)
169 3rkv_A Putative peptidylprolyl 97.6 0.00024 8.1E-09 61.8 10.0 103 62-169 10-125 (162)
170 3ro3_A PINS homolog, G-protein 97.6 0.00026 8.8E-09 58.7 9.5 104 63-169 9-117 (164)
171 3rjv_A Putative SEL1 repeat pr 97.6 0.0012 4E-08 60.9 14.8 172 51-296 8-197 (212)
172 3e4b_A ALGK; tetratricopeptide 97.6 0.0016 5.4E-08 67.4 17.3 186 49-314 165-366 (452)
173 1wao_1 Serine/threonine protei 97.6 3E-05 1E-09 81.5 4.3 128 62-231 5-134 (477)
174 3e4b_A ALGK; tetratricopeptide 97.5 0.00037 1.3E-08 72.2 11.1 99 63-169 106-207 (452)
175 2qfc_A PLCR protein; TPR, HTH, 97.5 0.00031 1.1E-08 67.4 9.9 102 63-168 155-264 (293)
176 2kat_A Uncharacterized protein 97.5 0.00073 2.5E-08 55.3 10.5 79 83-169 3-81 (115)
177 2kc7_A BFR218_protein; tetratr 97.4 0.0009 3.1E-08 52.9 9.5 66 66-139 3-69 (99)
178 2if4_A ATFKBP42; FKBP-like, al 97.3 0.00023 7.8E-09 71.0 6.0 128 27-164 190-322 (338)
179 1ihg_A Cyclophilin 40; ppiase 97.3 0.00079 2.7E-08 68.5 9.8 102 63-169 223-335 (370)
180 3rjv_A Putative SEL1 repeat pr 97.3 0.00047 1.6E-08 63.6 7.3 130 9-169 16-157 (212)
181 4f3v_A ESX-1 secretion system 97.3 0.00057 2E-08 68.3 8.4 193 63-319 7-225 (282)
182 3mv2_B Coatomer subunit epsilo 97.3 0.0015 5.2E-08 66.1 11.4 189 21-265 105-306 (310)
183 1b89_A Protein (clathrin heavy 97.2 0.0002 6.9E-09 76.0 4.7 178 71-316 11-191 (449)
184 1b89_A Protein (clathrin heavy 97.2 0.00014 4.8E-09 77.2 3.4 213 65-314 34-253 (449)
185 2if4_A ATFKBP42; FKBP-like, al 97.2 0.00075 2.6E-08 67.3 8.1 106 59-169 175-292 (338)
186 2l6j_A TPR repeat-containing p 97.2 0.00028 9.5E-09 56.2 4.0 99 10-129 3-102 (111)
187 3mv2_B Coatomer subunit epsilo 97.1 0.0031 1.1E-07 63.8 12.1 169 83-316 84-269 (310)
188 4b4t_Q 26S proteasome regulato 97.1 0.0022 7.5E-08 63.6 10.9 132 28-168 107-243 (434)
189 3dra_A Protein farnesyltransfe 97.1 0.043 1.5E-06 54.9 20.1 192 52-310 92-301 (306)
190 2hr2_A Hypothetical protein; a 97.1 0.0047 1.6E-07 56.8 11.8 103 63-170 11-131 (159)
191 3bee_A Putative YFRE protein; 96.9 0.0031 1.1E-07 52.1 8.5 75 58-141 1-78 (93)
192 3n71_A Histone lysine methyltr 96.9 0.0021 7.2E-08 68.5 9.3 131 29-167 322-461 (490)
193 1zu2_A Mitochondrial import re 96.9 0.0017 5.9E-08 59.7 7.0 95 51-169 24-139 (158)
194 2hr2_A Hypothetical protein; a 96.9 0.0014 4.7E-08 60.4 6.3 117 13-138 13-135 (159)
195 1na3_A Designed protein CTPR2; 96.9 0.0013 4.5E-08 50.4 5.4 84 10-119 8-91 (91)
196 3dra_A Protein farnesyltransfe 96.8 0.0078 2.7E-07 60.3 12.0 137 11-169 29-174 (306)
197 3n71_A Histone lysine methyltr 96.7 0.0058 2E-07 65.1 10.3 101 66-169 312-421 (490)
198 3ma5_A Tetratricopeptide repea 96.6 0.0085 2.9E-07 48.4 8.7 62 106-169 8-69 (100)
199 3qwp_A SET and MYND domain-con 96.4 0.017 5.8E-07 60.3 11.3 102 66-170 290-400 (429)
200 3bee_A Putative YFRE protein; 96.4 0.0076 2.6E-07 49.7 6.9 85 9-113 4-88 (93)
201 4e6h_A MRNA 3'-END-processing 96.1 0.093 3.2E-06 58.2 16.2 202 52-319 332-558 (679)
202 3qww_A SET and MYND domain-con 96.1 0.022 7.7E-07 59.7 10.5 94 74-170 309-411 (433)
203 2v5f_A Prolyl 4-hydroxylase su 96.1 0.021 7.3E-07 47.0 8.1 73 63-138 5-79 (104)
204 4g26_A Pentatricopeptide repea 96.0 0.091 3.1E-06 55.8 14.6 179 67-314 30-222 (501)
205 2kc7_A BFR218_protein; tetratr 95.8 0.0064 2.2E-07 47.9 3.6 70 54-139 25-95 (99)
206 4e6h_A MRNA 3'-END-processing 95.6 0.15 5E-06 56.6 14.9 211 9-299 341-573 (679)
207 1zu2_A Mitochondrial import re 95.5 0.028 9.5E-07 51.6 7.2 86 74-169 13-119 (158)
208 4h7y_A Dual specificity protei 95.4 0.14 5E-06 47.1 11.4 106 58-169 8-122 (161)
209 1klx_A Cysteine rich protein B 95.3 0.13 4.3E-06 44.3 10.5 87 69-169 31-125 (138)
210 3qwp_A SET and MYND domain-con 95.3 0.052 1.8E-06 56.6 9.4 103 31-141 302-407 (429)
211 3q7a_A Farnesyltransferase alp 94.7 0.85 2.9E-05 46.6 16.2 45 53-100 113-159 (349)
212 3qww_A SET and MYND domain-con 94.6 0.029 9.9E-07 58.8 5.2 104 31-142 313-419 (433)
213 1dce_A Protein (RAB geranylger 94.6 0.21 7.2E-06 53.8 12.0 134 11-169 25-172 (567)
214 1dce_A Protein (RAB geranylger 94.4 0.056 1.9E-06 58.3 6.9 111 51-169 95-220 (567)
215 1pc2_A Mitochondria fission pr 93.9 0.042 1.5E-06 50.2 4.1 72 206-303 31-107 (152)
216 3dss_A Geranylgeranyl transfer 93.6 0.37 1.3E-05 48.9 10.9 108 51-168 132-265 (331)
217 3ly7_A Transcriptional activat 93.1 0.26 8.8E-06 51.1 8.9 110 51-169 221-338 (372)
218 3q7a_A Farnesyltransferase alp 93.1 0.27 9.4E-06 50.3 9.0 135 12-168 51-194 (349)
219 3dss_A Geranylgeranyl transfer 92.1 1.1 3.9E-05 45.3 12.0 111 51-169 96-221 (331)
220 2v5f_A Prolyl 4-hydroxylase su 92.1 0.48 1.6E-05 38.7 7.6 62 108-169 8-74 (104)
221 3txn_A 26S proteasome regulato 91.9 1.1 3.7E-05 46.6 11.9 148 53-230 86-243 (394)
222 3ffl_A Anaphase-promoting comp 89.1 2.1 7.3E-05 39.6 9.8 118 107-233 22-148 (167)
223 1klx_A Cysteine rich protein B 88.8 1.9 6.4E-05 36.8 8.8 76 47-134 43-126 (138)
224 4h7y_A Dual specificity protei 88.8 1.6 5.6E-05 40.1 8.7 111 8-137 10-126 (161)
225 4b4t_R RPN7, 26S proteasome re 87.0 4.7 0.00016 41.7 12.1 100 62-166 130-233 (429)
226 1pc2_A Mitochondria fission pr 86.2 1.1 3.7E-05 40.8 5.9 75 57-138 26-104 (152)
227 1nzn_A CGI-135 protein, fissio 85.8 0.75 2.6E-05 40.7 4.5 72 206-303 34-110 (126)
228 2uy1_A Cleavage stimulation fa 85.7 2.1 7E-05 45.0 8.7 140 10-166 212-379 (493)
229 4g26_A Pentatricopeptide repea 84.7 8.4 0.00029 40.6 12.9 99 63-169 105-203 (501)
230 1y8m_A FIS1; mitochondria, unk 84.7 1.4 4.8E-05 39.8 5.8 72 206-303 38-113 (144)
231 3o48_A Mitochondria fission 1 84.4 1.6 5.3E-05 39.1 5.9 72 206-303 39-114 (134)
232 3u64_A Protein TP_0956; tetrat 82.4 2.9 9.8E-05 42.1 7.6 94 48-148 182-284 (301)
233 2wpv_A GET4, UPF0363 protein Y 81.8 19 0.00063 36.2 13.4 21 271-291 138-158 (312)
234 2ff4_A Probable regulatory pro 80.7 21 0.00073 36.1 13.6 99 67-170 119-234 (388)
235 3ly7_A Transcriptional activat 79.4 4.8 0.00016 41.6 8.2 75 55-138 269-343 (372)
236 3mkq_A Coatomer beta'-subunit; 79.3 8.5 0.00029 41.1 10.5 34 7-45 677-710 (814)
237 3txn_A 26S proteasome regulato 79.2 13 0.00046 38.4 11.7 103 64-169 20-127 (394)
238 3mkq_A Coatomer beta'-subunit; 79.1 8.3 0.00028 41.2 10.4 87 65-168 683-776 (814)
239 2uy1_A Cleavage stimulation fa 79.0 14 0.00049 38.5 12.0 125 11-168 286-411 (493)
240 3lpz_A GET4 (YOR164C homolog); 78.2 15 0.00052 37.4 11.4 21 271-291 140-160 (336)
241 3ffl_A Anaphase-promoting comp 75.8 5.3 0.00018 36.9 6.6 81 63-149 63-162 (167)
242 2ff4_A Probable regulatory pro 74.6 6.2 0.00021 40.1 7.5 65 64-136 172-236 (388)
243 4gns_B Protein CSD3, chitin bi 74.4 12 0.00042 42.0 10.4 80 84-167 311-397 (754)
244 2qfl_A Inositol-1-monophosphat 72.5 2.5 8.5E-05 40.9 3.7 54 437-496 31-84 (267)
245 3u64_A Protein TP_0956; tetrat 68.2 12 0.0004 37.7 7.6 108 56-169 145-268 (301)
246 4b4t_P 26S proteasome regulato 60.1 66 0.0023 33.2 11.9 102 65-168 139-245 (445)
247 1xi6_A Extragenic suppressor; 58.9 8.3 0.00028 37.3 4.4 47 441-496 46-92 (262)
248 1zbp_A Hypothetical protein VP 57.0 22 0.00076 35.2 7.1 102 51-167 19-126 (273)
249 4b4t_R RPN7, 26S proteasome re 55.5 15 0.00052 37.7 6.0 65 105-169 131-196 (429)
250 3kae_A CDC27, possible protein 53.5 37 0.0013 32.1 7.6 75 57-136 56-145 (242)
251 2p58_C Putative type III secre 52.2 28 0.00095 30.1 5.9 37 271-311 44-80 (116)
252 2fvz_A Inositol monophosphatas 48.3 15 0.0005 35.5 4.3 52 442-496 35-86 (273)
253 2uwj_G Type III export protein 43.6 28 0.00096 30.0 4.7 39 269-311 41-79 (115)
254 1nzn_A CGI-135 protein, fissio 41.7 1.3E+02 0.0046 26.1 9.0 33 105-137 74-106 (126)
255 4b4t_P 26S proteasome regulato 40.1 1.2E+02 0.004 31.4 9.8 63 106-168 138-204 (445)
256 1vdw_A Hypothetical protein PH 37.4 23 0.00079 33.8 3.7 48 440-496 36-84 (254)
257 4gns_B Protein CSD3, chitin bi 34.6 45 0.0015 37.5 5.9 60 63-130 337-396 (754)
258 1zbp_A Hypothetical protein VP 33.2 80 0.0027 31.2 6.8 54 114-169 6-59 (273)
259 2yin_A DOCK2, dedicator of cyt 31.9 57 0.002 34.0 5.9 50 267-316 92-147 (436)
260 1wy6_A Hypothetical protein ST 26.7 2.3E+02 0.008 25.8 8.0 94 15-134 59-154 (172)
261 2vkj_A TM1634; membrane protei 25.0 1.2E+02 0.0042 25.4 5.5 50 267-316 53-104 (106)
262 3b8b_A CYSQ, sulfite synthesis 23.8 55 0.0019 31.9 3.8 37 439-477 53-89 (292)
263 2d2s_A Exocyst complex compone 22.0 2E+02 0.007 27.3 7.3 103 61-170 89-211 (235)
264 3o48_A Mitochondria fission 1 21.9 74 0.0025 28.2 3.8 69 63-138 40-111 (134)
265 1y8m_A FIS1; mitochondria, unk 21.4 1.3E+02 0.0044 27.0 5.3 69 63-138 39-110 (144)
No 1
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.47 E-value=7.1e-12 Score=123.96 Aligned_cols=132 Identities=17% Similarity=0.093 Sum_probs=75.5
Q ss_pred CChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHH
Q psy7457 9 ENPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGY 88 (497)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y 88 (497)
.+|..|..++.+.+.+ ..+++|+-.+.+++.. +|.+...+..++.+|.+.|++. +|++.|
T Consensus 31 ~~~~~~~~l~~~~~~~-----~~~~~a~~~~~~a~~~-------------~p~~~~~~~~lg~~~~~~g~~~--~A~~~~ 90 (388)
T 1w3b_A 31 DNTGVLLLLSSIHFQC-----RRLDRSAHFSTLAIKQ-------------NPLLAEAYSNLGNVYKERGQLQ--EAIEHY 90 (388)
T ss_dssp TCHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHH-------------CTTCHHHHHHHHHHHHHHTCHH--HHHHHH
T ss_pred CCHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHhc-------------CCCchHHHHHHHHHHHHCCCHH--HHHHHH
Confidence 4555665555544332 3445566666555542 5555666666666666666666 666666
Q ss_pred HHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhc
Q psy7457 89 QRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFA 168 (497)
Q Consensus 89 ~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~ 168 (497)
+++++. .|.+. +....+|..|...|+.++|++.|++++...|+. ..-.+.++.++...|+|++|++.+++..
T Consensus 91 ~~al~~-~p~~~-----~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~--~~~~~~l~~~~~~~g~~~~A~~~~~~al 162 (388)
T 1w3b_A 91 RHALRL-KPDFI-----DGYINLAAALVAAGDMEGAVQAYVSALQYNPDL--YCVRSDLGNLLKALGRLEEAKACYLKAI 162 (388)
T ss_dssp HHHHHH-CTTCH-----HHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTC--THHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred HHHHHc-CcchH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc--HHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 666666 55542 344556666666666666666666666666543 2334455566666666666666655543
No 2
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.47 E-value=4e-12 Score=120.53 Aligned_cols=203 Identities=11% Similarity=-0.085 Sum_probs=160.8
Q ss_pred HHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy7457 51 ILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAI 130 (497)
Q Consensus 51 ~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~ 130 (497)
++.++...+|++...+...+.+|...|++. +|++.|+++++. .|.+. .....+|.+|...|++++|+..++.
T Consensus 113 ~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~--~A~~~~~~a~~~-~~~~~-----~~~~~l~~~~~~~~~~~~A~~~~~~ 184 (330)
T 3hym_B 113 YLSKATTLEKTYGPAWIAYGHSFAVESEHD--QAMAAYFTAAQL-MKGCH-----LPMLYIGLEYGLTNNSKLAERFFSQ 184 (330)
T ss_dssp HHHHHHTTCTTCTHHHHHHHHHHHHHTCHH--HHHHHHHHHHHH-TTTCS-----HHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHhCCccHHHHHHHHHHHHHccCHH--HHHHHHHHHHHh-ccccH-----HHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 344455568888999999999999999999 999999999999 88875 4566699999999999999999999
Q ss_pred HHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchh
Q psy7457 131 AFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEIL 210 (497)
Q Consensus 131 a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr 210 (497)
++...|.. ....+.++.++...|+|++|++.+++.....- ... +. ...|. -.++.
T Consensus 185 al~~~~~~--~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~--~~~-------~~--------~~~~~------~~~~~ 239 (330)
T 3hym_B 185 ALSIAPED--PFVMHEVGVVAFQNGEWKTAEKWFLDALEKIK--AIG-------NE--------VTVDK------WEPLL 239 (330)
T ss_dssp HHTTCTTC--HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHT--TTS-------CS--------CTTTT------CCHHH
T ss_pred HHHhCCCC--hHHHHHHHHHHHHcccHHHHHHHHHHHHHHhh--hcc-------cc--------ccccH------HHHHH
Confidence 99988864 56688899999999999999999988765320 000 00 00011 25688
Q ss_pred HHHHHHHhhcCCCCchhHHhhcc-ccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHHHH
Q psy7457 211 SKFVITLVHLRSETQFPTLLASL-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAVQV 289 (497)
Q Consensus 211 ~KLgI~ll~Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al~~ 289 (497)
..+|.++..+|+.+.+...+... ..++. ... .+ ..+|.+|...|.+++|+.+
T Consensus 240 ~~la~~~~~~g~~~~A~~~~~~a~~~~~~-~~~--~~------------------------~~la~~~~~~g~~~~A~~~ 292 (330)
T 3hym_B 240 NNLGHVCRKLKKYAEALDYHRQALVLIPQ-NAS--TY------------------------SAIGYIHSLMGNFENAVDY 292 (330)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CSH--HH------------------------HHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhhCcc-chH--HH------------------------HHHHHHHHHhccHHHHHHH
Confidence 89999999999999988887766 44443 344 77 8999999999999999999
Q ss_pred HHHHhcCCCCChHHHHHHHHHHHHH
Q psy7457 290 LVLLVSSEKYNQPGVWKQLAETYEK 314 (497)
Q Consensus 290 l~~L~~~~~y~~~~vwl~lAeCy~~ 314 (497)
|...+....- .+..|..+|.||..
T Consensus 293 ~~~al~~~p~-~~~~~~~l~~~~~~ 316 (330)
T 3hym_B 293 FHTALGLRRD-DTFSVTMLGHCIEM 316 (330)
T ss_dssp HHTTTTTCSC-CHHHHHHHHHHHHT
T ss_pred HHHHHccCCC-chHHHHHHHHHHHH
Confidence 9999887654 45669999999954
No 3
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.45 E-value=2.8e-12 Score=122.40 Aligned_cols=308 Identities=10% Similarity=0.044 Sum_probs=211.8
Q ss_pred ChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHH
Q psy7457 10 NPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQ 89 (497)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~ 89 (497)
||+.|+.+++..+.+ .+.++|+-+|.+++.. +|++...+..++.+|...|++. +|++.|+
T Consensus 2 ~~~~~~~~~~~~~~~-----g~~~~A~~~~~~~l~~-------------~p~~~~~~~~~a~~~~~~~~~~--~A~~~~~ 61 (359)
T 3ieg_A 2 DVEKHLELGKKLLAA-----GQLADALSQFHAAVDG-------------DPDNYIAYYRRATVFLAMGKSK--AALPDLT 61 (359)
T ss_dssp HHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHH-------------CTTCHHHHHHHHHHHHHHTCHH--HHHHHHH
T ss_pred cHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHhh-------------CcccHHHHHHHHHHHHHccCHH--HHHHHHH
Confidence 678888888776653 5677888888888763 8889999999999999999999 9999999
Q ss_pred HHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCC-hhHHH------------HHHHHHHhhcc
Q psy7457 90 RYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIR-PEHCN------------LYLEVLLELKR 156 (497)
Q Consensus 90 ~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~-~~~vN------------iLaEL~i~~k~ 156 (497)
++++. .|.+. .+...+|.+|...|+.++|+..|+.++...|+..+ ..... .++.++...|+
T Consensus 62 ~~~~~-~~~~~-----~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~ 135 (359)
T 3ieg_A 62 KVIAL-KMDFT-----AARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGAD 135 (359)
T ss_dssp HHHHH-CTTCH-----HHHHHHHHHHHHHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHh-CCCcc-----hHHHHHHHHHHHcCChHHHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 99999 88774 68889999999999999999999999998882211 11122 22789999999
Q ss_pred HHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhcc-cc
Q psy7457 157 YETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLASL-KF 235 (497)
Q Consensus 157 y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l-~e 235 (497)
|++|++.+.+..... |. ..++...+|.++..+|+.+.+...+... ..
T Consensus 136 ~~~A~~~~~~~~~~~--------------------------~~------~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 183 (359)
T 3ieg_A 136 YTAAITFLDKILEVC--------------------------VW------DAELRELRAECFIKEGEPRKAISDLKAASKL 183 (359)
T ss_dssp HHHHHHHHHHHHHHC--------------------------TT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhC--------------------------CC------chHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 999999998876421 33 3467788888888888888877777666 44
Q ss_pred CcccccccchhhhhHHHHHHHH-HHHHHHHhhhh------------h---------hHHHHHHHHhcccHHHHHHHHHHH
Q psy7457 236 DVEMYGTITVYLDIAEALIQEH-YEAYAVQFKEL------------V---------YLDIAEALIQEHYEAYAVQVLVLL 293 (497)
Q Consensus 236 ~~ee~~D~~Ly~~~~~~~~~~~-~~~~~~~~~~~------------~---------~ldvaeAl~e~g~y~~Al~~l~~L 293 (497)
+|. ..+ .++..+....... |+.+...|.+. . .+..|.++...|.|++|+.+|...
T Consensus 184 ~~~-~~~--~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~ 260 (359)
T 3ieg_A 184 KSD-NTE--AFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESV 260 (359)
T ss_dssp CSC-CHH--HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCC-CHH--HHHHHHHHHHHcCCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 443 234 5545555555444 55555555411 1 234588888888888888888888
Q ss_pred hcCCCCChH---HHHHHHHHHHHHhhhccCcccccccCCCchHHHHHHHhhhhhcccccccHHHHhhccccccccccccC
Q psy7457 294 VSSEKYNQP---GVWKQLAETYEKSECLSGVVVSTVDTGSGSWWFQSMSSAMCSTVLIKDSTEHLDQLSLDATTVLYKTG 370 (497)
Q Consensus 294 ~~~~~y~~~---~vwl~lAeCy~~l~~l~~~~~~~~d~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 370 (497)
+.....+.. .++..+|.||.+.+..+.... ++...++. .|. . -.-+..++ .+.+..|
T Consensus 261 ~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~---------~~~~~~~~---~~~---~-~~~~~~~~----~~~~~~g 320 (359)
T 3ieg_A 261 MKTEPSVAEYTVRSKERICHCFSKDEKPVEAIR---------ICSEVLQM---EPD---N-VNALKDRA----EAYLIEE 320 (359)
T ss_dssp HHHCCSSHHHHHHHHHHHHHHHHHTTCHHHHHH---------HHHHHHHH---CTT---C-HHHHHHHH----HHHHHTT
T ss_pred HhcCCCchHHHHHHHHHHHHHHHHccCHHHHHH---------HHHHHHHh---Ccc---c-HHHHHHHH----HHHHHcC
Confidence 776555422 346678888887664331100 01111110 110 0 01111111 2344568
Q ss_pred CcchhHHHHHHHHHhcCCCccchhhhhc
Q psy7457 371 HIPHAYQLFRVLMLKNLDSKVVLNLMNL 398 (497)
Q Consensus 371 ~~~~ay~~~r~~~~~~~~~~~~wnlfn~ 398 (497)
++..|-..++..+..++++..+|..+..
T Consensus 321 ~~~~A~~~~~~a~~~~p~~~~~~~~l~~ 348 (359)
T 3ieg_A 321 MYDEAIQDYEAAQEHNENDQQIREGLEK 348 (359)
T ss_dssp CHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCChHHHHHHHH
Confidence 8888888888888777777777765543
No 4
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.44 E-value=2.4e-12 Score=124.91 Aligned_cols=219 Identities=10% Similarity=0.065 Sum_probs=117.6
Q ss_pred CCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHcc
Q psy7457 57 LSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSA 136 (497)
Q Consensus 57 ~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~ 136 (497)
..+|++...+..++.+|.+.|++. +|++.|+++++. .|.+. .+...+|.+|...|+.++|++.+++++...|
T Consensus 92 ~~~p~~~~~~~~l~~~~~~~g~~~--~A~~~~~~al~~-~~~~~-----~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~ 163 (368)
T 1fch_A 92 QQDPKHMEAWQYLGTTQAENEQEL--LAISALRRCLEL-KPDNQ-----TALMALAVSFTNESLQRQACEILRDWLRYTP 163 (368)
T ss_dssp HSCTTCHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHTST
T ss_pred HhCCCCHHHHHHHHHHHHHCcCHH--HHHHHHHHHHhc-CCCCH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc
Confidence 345555566666666666666666 666666666665 55442 4555556666666666666666666665555
Q ss_pred CCCChhHH--------------HHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCC
Q psy7457 137 HLIRPEHC--------------NLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPN 202 (497)
Q Consensus 137 ~~f~~~~v--------------NiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~ 202 (497)
.....-.. +.+..++ ..|+|++|+..+++.... .|...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~a~~~--------------------------~p~~~- 215 (368)
T 1fch_A 164 AYAHLVTPAEEGAGGAGLGPSKRILGSLL-SDSLFLEVKELFLAAVRL--------------------------DPTSI- 215 (368)
T ss_dssp TTGGGCC---------------CTTHHHH-HHHHHHHHHHHHHHHHHH--------------------------STTSC-
T ss_pred CcHHHHHHHHHHhhhhcccHHHHHHHHHh-hcccHHHHHHHHHHHHHh--------------------------CcCcc-
Confidence 43211100 0122233 555666666555554321 13322
Q ss_pred CCCCcchhHHHHHHHhhcCCCCchhHHhhcc-ccCcccccccchhhhhHHHHHHHH-HHHHHHHhh---------hhhhH
Q psy7457 203 LVPPPEILSKFVITLVHLRSETQFPTLLASL-KFDVEMYGTITVYLDIAEALIQEH-YEAYAVQFK---------ELVYL 271 (497)
Q Consensus 203 l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~-~~~~~~~~~---------~~~~l 271 (497)
...+...+|.++...|+.+.+...+... ..+|. .++ .++..+....... |+.+...|. ..++.
T Consensus 216 ---~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~--~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 289 (368)
T 1fch_A 216 ---DPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN-DYL--LWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRY 289 (368)
T ss_dssp ---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHH--HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred ---cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC-CHH--HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHH
Confidence 3466777888888888888877776655 44432 233 5533343333333 444444444 11456
Q ss_pred HHHHHHHhcccHHHHHHHHHHHhcCCCCC----------hHHHHHHHHHHHHHhhh
Q psy7457 272 DIAEALIQEHYEAYAVQVLVLLVSSEKYN----------QPGVWKQLAETYEKSEC 317 (497)
Q Consensus 272 dvaeAl~e~g~y~~Al~~l~~L~~~~~y~----------~~~vwl~lAeCy~~l~~ 317 (497)
.+|.+|...|.|.+|+.+|...+....-+ .+.+|..+|.||.+++.
T Consensus 290 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 345 (368)
T 1fch_A 290 NLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQ 345 (368)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCC
Confidence 66666666666666666666555433222 14556666666666553
No 5
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.41 E-value=2.2e-12 Score=126.26 Aligned_cols=196 Identities=9% Similarity=-0.046 Sum_probs=127.0
Q ss_pred CCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccC
Q psy7457 58 SKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAH 137 (497)
Q Consensus 58 ~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~ 137 (497)
.+|++...+...+.+|...|++. +|++.|+++++. .|.+. .+...+|.+|...|++++|++.|++++...|.
T Consensus 94 ~~p~~~~~~~~lg~~~~~~g~~~--~A~~~~~~al~~-~p~~~-----~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~ 165 (365)
T 4eqf_A 94 QDPGDAEAWQFLGITQAENENEQ--AAIVALQRCLEL-QPNNL-----KALMALAVSYTNTSHQQDACEALKNWIKQNPK 165 (365)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHH
T ss_pred hCcCCHHHHHHHHHHHHHCCCHH--HHHHHHHHHHhc-CCCCH-----HHHHHHHHHHHccccHHHHHHHHHHHHHhCcc
Confidence 35666666666666777777666 677777766666 66553 45566666666677777777777666666654
Q ss_pred CCCh--------hHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcch
Q psy7457 138 LIRP--------EHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEI 209 (497)
Q Consensus 138 ~f~~--------~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDL 209 (497)
.... .-.+.++.++...|+|++|++.+++.... .|... ..++
T Consensus 166 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--------------------------~p~~~----~~~~ 215 (365)
T 4eqf_A 166 YKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQ--------------------------NGDMI----DPDL 215 (365)
T ss_dssp HHCC-------------------CCHHHHHHHHHHHHHHHH--------------------------SCSSC----CHHH
T ss_pred chHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHh--------------------------CcCcc----CHHH
Confidence 2111 11233466666666666666666665431 13433 4567
Q ss_pred hHHHHHHHhhcCCCCchhHHhhcc-ccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHHH
Q psy7457 210 LSKFVITLVHLRSETQFPTLLASL-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAVQ 288 (497)
Q Consensus 210 r~KLgI~ll~Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al~ 288 (497)
...+|.++..+|+.+.+...+... ..+|. .+. .+ ..+|.+|...|.|++|+.
T Consensus 216 ~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~--~~------------------------~~l~~~~~~~g~~~~A~~ 268 (365)
T 4eqf_A 216 QTGLGVLFHLSGEFNRAIDAFNAALTVRPE-DYS--LW------------------------NRLGATLANGDRSEEAVE 268 (365)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHH--HH------------------------HHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHH--HH------------------------HHHHHHHHHcCCHHHHHH
Confidence 778888888888888877776655 44332 234 66 899999999999999999
Q ss_pred HHHHHhcCCCCChHHHHHHHHHHHHHhhhcc
Q psy7457 289 VLVLLVSSEKYNQPGVWKQLAETYEKSECLS 319 (497)
Q Consensus 289 ~l~~L~~~~~y~~~~vwl~lAeCy~~l~~l~ 319 (497)
+|...+.....+ +.+|..+|.||.+++..+
T Consensus 269 ~~~~al~~~p~~-~~~~~~l~~~~~~~g~~~ 298 (365)
T 4eqf_A 269 AYTRALEIQPGF-IRSRYNLGISCINLGAYR 298 (365)
T ss_dssp HHHHHHHHCTTC-HHHHHHHHHHHHHHTCCH
T ss_pred HHHHHHhcCCCc-hHHHHHHHHHHHHCCCHH
Confidence 999988765443 667999999999877544
No 6
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.40 E-value=1.4e-11 Score=117.61 Aligned_cols=254 Identities=16% Similarity=0.179 Sum_probs=185.0
Q ss_pred CChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHH
Q psy7457 9 ENPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGY 88 (497)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y 88 (497)
.+|..|+.++..... ..++++|+-+|.+++. .+|++...+...+.+|...|++. +|++.|
T Consensus 35 ~~~~~~~~~a~~~~~-----~~~~~~A~~~~~~~~~-------------~~~~~~~~~~~l~~~~~~~~~~~--~A~~~~ 94 (359)
T 3ieg_A 35 DNYIAYYRRATVFLA-----MGKSKAALPDLTKVIA-------------LKMDFTAARLQRGHLLLKQGKLD--EAEDDF 94 (359)
T ss_dssp TCHHHHHHHHHHHHH-----HTCHHHHHHHHHHHHH-------------HCTTCHHHHHHHHHHHHHHTCHH--HHHHHH
T ss_pred ccHHHHHHHHHHHHH-----ccCHHHHHHHHHHHHH-------------hCCCcchHHHHHHHHHHHcCChH--HHHHHH
Confidence 356666666655443 3456667766666665 37889999999999999999999 999999
Q ss_pred HHHHhccCC---CCChhhHHHH--------HHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhhccH
Q psy7457 89 QRYLKNITP---DSDPQTILDL--------STRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLELKRY 157 (497)
Q Consensus 89 ~~il~~~~P---~d~~~~~~~~--------~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k~y 157 (497)
+++++. .| .+. ..+..+ ...+|..|...|+.++|++.++.++...|.. ..-...++.++...|+|
T Consensus 95 ~~~~~~-~~~~~~~~-~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 170 (359)
T 3ieg_A 95 KKVLKS-NPSEQEEK-EAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVWD--AELRELRAECFIKEGEP 170 (359)
T ss_dssp HHHHTS-CCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--HHHHHHHHHHHHHTTCH
T ss_pred HHHHhc-CCcccChH-HHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCc--hHHHHHHHHHHHHCCCH
Confidence 999999 88 543 211111 1233899999999999999999999999964 56788899999999999
Q ss_pred HHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhcc-ccC
Q psy7457 158 ETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLASL-KFD 236 (497)
Q Consensus 158 ~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l-~e~ 236 (497)
++|++.+++..... |. -.+....+|.++..+|+.+.+...+... ..+
T Consensus 171 ~~A~~~~~~~~~~~--------------------------~~------~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~ 218 (359)
T 3ieg_A 171 RKAISDLKAASKLK--------------------------SD------NTEAFYKISTLYYQLGDHELSLSEVRECLKLD 218 (359)
T ss_dssp HHHHHHHHHHHTTC--------------------------SC------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhC--------------------------CC------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Confidence 99999998866410 33 2367788888999999888877776655 443
Q ss_pred cccccccchh---------hhhHHHHHHHH-HHHHHHHhhh-------------hhhHHHHHHHHhcccHHHHHHHHHHH
Q psy7457 237 VEMYGTITVY---------LDIAEALIQEH-YEAYAVQFKE-------------LVYLDIAEALIQEHYEAYAVQVLVLL 293 (497)
Q Consensus 237 ~ee~~D~~Ly---------~~~~~~~~~~~-~~~~~~~~~~-------------~~~ldvaeAl~e~g~y~~Al~~l~~L 293 (497)
+....-...+ +..+...+... |+++...|.+ .++..+|.+|...|.|++|+.+|...
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~ 298 (359)
T 3ieg_A 219 QDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKERICHCFSKDEKPVEAIRICSEV 298 (359)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 3322110011 01123333333 6666666661 24677999999999999999999999
Q ss_pred hcCCCCChHHHHHHHHHHHHHhhhcc
Q psy7457 294 VSSEKYNQPGVWKQLAETYEKSECLS 319 (497)
Q Consensus 294 ~~~~~y~~~~vwl~lAeCy~~l~~l~ 319 (497)
+.... +.+.+|..+|.||.+.+..+
T Consensus 299 ~~~~~-~~~~~~~~~~~~~~~~g~~~ 323 (359)
T 3ieg_A 299 LQMEP-DNVNALKDRAEAYLIEEMYD 323 (359)
T ss_dssp HHHCT-TCHHHHHHHHHHHHHTTCHH
T ss_pred HHhCc-ccHHHHHHHHHHHHHcCCHH
Confidence 88644 34667999999999877554
No 7
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.40 E-value=4.1e-12 Score=120.26 Aligned_cols=248 Identities=10% Similarity=0.046 Sum_probs=167.4
Q ss_pred CCChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHH
Q psy7457 8 YENPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAG 87 (497)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~ 87 (497)
+.+++.|+..+...+.+ .++++|+-+|.+++. .+|++...+..++.+|...|++. +|++.
T Consensus 18 ~~~~~~~~~~a~~~~~~-----~~~~~A~~~~~~~~~-------------~~~~~~~~~~~l~~~~~~~~~~~--~A~~~ 77 (327)
T 3cv0_A 18 YMYHENPMEEGLSMLKL-----ANLAEAALAFEAVCQ-------------AAPEREEAWRSLGLTQAENEKDG--LAIIA 77 (327)
T ss_dssp GGGSSCHHHHHHHHHHT-----TCHHHHHHHHHHHHH-------------HCTTCHHHHHHHHHHHHHTTCHH--HHHHH
T ss_pred hhhhHHHHHHHHHHHHh-----ccHHHHHHHHHHHHH-------------hCCCCHHHHHHHHHHHHHcCCHH--HHHHH
Confidence 34556677777655543 456777777777765 37888999999999999999999 99999
Q ss_pred HHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHH-----------HH-HH-HHHhh
Q psy7457 88 YQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCN-----------LY-LE-VLLEL 154 (497)
Q Consensus 88 y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vN-----------iL-aE-L~i~~ 154 (497)
|+++++. .|.+. .+...+|.+|...|+.++|++.++.++...|.....-..- .+ .. ++...
T Consensus 78 ~~~a~~~-~~~~~-----~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (327)
T 3cv0_A 78 LNHARML-DPKDI-----AVHAALAVSHTNEHNANAALASLRAWLLSQPQYEQLGSVNLQADVDIDDLNVQSEDFFFAAP 151 (327)
T ss_dssp HHHHHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTTTC--------------------CCTTSH
T ss_pred HHHHHhc-CcCCH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHhHHHHHHHHHHHHHHhHHHHHc
Confidence 9999999 88774 6788899999999999999999999999888653221100 01 33 47888
Q ss_pred ccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhcc-
Q psy7457 155 KRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLASL- 233 (497)
Q Consensus 155 k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l- 233 (497)
|++++|++.+++..... |. ..++...+|.++..+|+.+.+...+...
T Consensus 152 ~~~~~A~~~~~~~~~~~--------------------------~~------~~~~~~~la~~~~~~~~~~~A~~~~~~~~ 199 (327)
T 3cv0_A 152 NEYRECRTLLHAALEMN--------------------------PN------DAQLHASLGVLYNLSNNYDSAAANLRRAV 199 (327)
T ss_dssp HHHHHHHHHHHHHHHHS--------------------------TT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhhC--------------------------CC------CHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 99999999998865421 22 3467788888999999888877777665
Q ss_pred ccCcccccccchhhhhHHHHHHHH-HHHHHHHhh---------hhhhHHHHHHHHhcccHHHHHHHHHHHhcCCCCC---
Q psy7457 234 KFDVEMYGTITVYLDIAEALIQEH-YEAYAVQFK---------ELVYLDIAEALIQEHYEAYAVQVLVLLVSSEKYN--- 300 (497)
Q Consensus 234 ~e~~ee~~D~~Ly~~~~~~~~~~~-~~~~~~~~~---------~~~~ldvaeAl~e~g~y~~Al~~l~~L~~~~~y~--- 300 (497)
..++. ..+ .++..+....... |+++...|. ...+..+|.+|...|++++|+++|...+.....+
T Consensus 200 ~~~~~-~~~--~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 276 (327)
T 3cv0_A 200 ELRPD-DAQ--LWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTP 276 (327)
T ss_dssp HHCTT-CHH--HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-
T ss_pred HhCCC-cHH--HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccc
Confidence 44442 233 5533333333332 444444443 1245566666666666666666666555443332
Q ss_pred --------hHHHHHHHHHHHHHhh
Q psy7457 301 --------QPGVWKQLAETYEKSE 316 (497)
Q Consensus 301 --------~~~vwl~lAeCy~~l~ 316 (497)
.+.+|..+|.||.+++
T Consensus 277 ~~~~~~~~~~~~~~~l~~~~~~~g 300 (327)
T 3cv0_A 277 TGEASREATRSMWDFFRMLLNVMN 300 (327)
T ss_dssp ----CCTHHHHHHHHHHHHHHHTT
T ss_pred cccchhhcCHHHHHHHHHHHHhcC
Confidence 4455666666666544
No 8
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.39 E-value=7e-12 Score=116.74 Aligned_cols=189 Identities=12% Similarity=0.032 Sum_probs=158.6
Q ss_pred CccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCC
Q psy7457 60 DTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLI 139 (497)
Q Consensus 60 p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f 139 (497)
|.+.+.+..++.++.+.|++. +|+..|+++++. -|.+. ++...+|.+|...|+.++|+..|++++...|+.
T Consensus 2 p~~~~~~~~lg~~~~~~g~~~--~A~~~~~~al~~-~p~~~-----~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~- 72 (217)
T 2pl2_A 2 QTAEQNPLRLGVQLYALGRYD--AALTLFERALKE-NPQDP-----EALYWLARTQLKLGLVNPALENGKTLVARTPRY- 72 (217)
T ss_dssp --CCHHHHHHHHHHHHTTCHH--HHHHHHHHHHTT-SSSCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-
T ss_pred CCcHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHh-CCCCH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc-
Confidence 677889999999999999999 999999999999 89885 688899999999999999999999999999965
Q ss_pred ChhHHHHHHHHHHhh-----------ccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcc
Q psy7457 140 RPEHCNLYLEVLLEL-----------KRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPE 208 (497)
Q Consensus 140 ~~~~vNiLaEL~i~~-----------k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiD 208 (497)
..-...++.++... |++++|+..+++....- |++ .+
T Consensus 73 -~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~--------------------------P~~------~~ 119 (217)
T 2pl2_A 73 -LGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVN--------------------------PRY------AP 119 (217)
T ss_dssp -HHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHC--------------------------TTC------HH
T ss_pred -HHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhC--------------------------ccc------HH
Confidence 56678899999999 99999999998876421 443 46
Q ss_pred hhHHHHHHHhhcCCCCchhHHhhcc-ccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHH
Q psy7457 209 ILSKFVITLVHLRSETQFPTLLASL-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAV 287 (497)
Q Consensus 209 Lr~KLgI~ll~Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al 287 (497)
....+|.++..+|+.+++...+... ..+ +..+ .+ +..|.+|...|.+++|+
T Consensus 120 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~--~~~~--~~------------------------~~la~~~~~~g~~~~A~ 171 (217)
T 2pl2_A 120 LHLQRGLVYALLGERDKAEASLKQALALE--DTPE--IR------------------------SALAELYLSMGRLDEAL 171 (217)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC--CCHH--HH------------------------HHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHhcc--cchH--HH------------------------HHHHHHHHHcCCHHHHH
Confidence 7889999999999999988887766 554 4555 78 99999999999999999
Q ss_pred HHHHHHhcCCCCChHHHHHHHHHHHHHhhhcc
Q psy7457 288 QVLVLLVSSEKYNQPGVWKQLAETYEKSECLS 319 (497)
Q Consensus 288 ~~l~~L~~~~~y~~~~vwl~lAeCy~~l~~l~ 319 (497)
..|...+.....+ +.++..+|.+|.+++..+
T Consensus 172 ~~~~~al~~~P~~-~~~~~~la~~~~~~g~~~ 202 (217)
T 2pl2_A 172 AQYAKALEQAPKD-LDLRVRYASALLLKGKAE 202 (217)
T ss_dssp HHHHHHHHHSTTC-HHHHHHHHHHHTC-----
T ss_pred HHHHHHHHhCCCC-hHHHHHHHHHHHHccCHH
Confidence 9999999876544 456999999998877544
No 9
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.39 E-value=7.6e-12 Score=125.07 Aligned_cols=307 Identities=10% Similarity=0.040 Sum_probs=203.1
Q ss_pred CChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHH
Q psy7457 9 ENPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGY 88 (497)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y 88 (497)
.+++.|+.+++..+. ..++++|+-+|.+++. .+|++...+..++.+|...|++. +|++.|
T Consensus 24 ~~~~~~~~~~~~~~~-----~g~~~~A~~~~~~~l~-------------~~p~~~~~~~~l~~~~~~~g~~~--~A~~~~ 83 (450)
T 2y4t_A 24 ADVEKHLELGKKLLA-----AGQLADALSQFHAAVD-------------GDPDNYIAYYRRATVFLAMGKSK--AALPDL 83 (450)
T ss_dssp HHHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHH-------------HCTTCHHHHHHHHHHHHHTTCHH--HHHHHH
T ss_pred HHHHHHHHHHHHHHH-----CCCHHHHHHHHHHHHH-------------hCCccHHHHHHHHHHHHHCCCHH--HHHHHH
Confidence 345666666665544 3567778888877765 37889999999999999999999 999999
Q ss_pred HHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCC----ChhH---------HHHHHHHHHhhc
Q psy7457 89 QRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLI----RPEH---------CNLYLEVLLELK 155 (497)
Q Consensus 89 ~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f----~~~~---------vNiLaEL~i~~k 155 (497)
+++++. .|.+. .+...+|.+|...|++++|+..|++++...|+.. .|.. ...++..+...|
T Consensus 84 ~~al~~-~p~~~-----~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~ 157 (450)
T 2y4t_A 84 TKVIQL-KMDFT-----AARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSG 157 (450)
T ss_dssp HHHHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhc-CCCcH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999 88774 6788999999999999999999999999888642 1111 122366699999
Q ss_pred cHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhcc-c
Q psy7457 156 RYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLASL-K 234 (497)
Q Consensus 156 ~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l-~ 234 (497)
+|++|++.+.+..... |. ..++...+|.++..+|+.+.+...+... .
T Consensus 158 ~~~~A~~~~~~~~~~~--------------------------~~------~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~ 205 (450)
T 2y4t_A 158 DYTAAIAFLDKILEVC--------------------------VW------DAELRELRAECFIKEGEPRKAISDLKAASK 205 (450)
T ss_dssp CHHHHHHHHHHHHHHC--------------------------TT------CHHHHHHHHHHHHHTTCGGGGHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhC--------------------------CC------ChHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 9999999998865421 23 3466778888888888888877777665 4
Q ss_pred cCcccccccchhhhhHHHHHHHH-HHHHHHHhhhh---------h------------hHHHHHHHHhcccHHHHHHHHHH
Q psy7457 235 FDVEMYGTITVYLDIAEALIQEH-YEAYAVQFKEL---------V------------YLDIAEALIQEHYEAYAVQVLVL 292 (497)
Q Consensus 235 e~~ee~~D~~Ly~~~~~~~~~~~-~~~~~~~~~~~---------~------------~ldvaeAl~e~g~y~~Al~~l~~ 292 (497)
.++. ..+ .++..+....+.. |+.+...|.+. . .+..|.++...|.+.+|+.+|..
T Consensus 206 ~~~~-~~~--~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ 282 (450)
T 2y4t_A 206 LKND-NTE--AFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYES 282 (450)
T ss_dssp HHCS-CHH--HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred hCCC-CHH--HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 3332 233 5534444444433 55555444411 1 13347888888888888888877
Q ss_pred HhcCCCCCh---HHHHHHHHHHHHHhhhccCcccccccCCCchHHHHHHHhhh-hhcccccccHHHHhhccccccccccc
Q psy7457 293 LVSSEKYNQ---PGVWKQLAETYEKSECLSGVVVSTVDTGSGSWWFQSMSSAM-CSTVLIKDSTEHLDQLSLDATTVLYK 368 (497)
Q Consensus 293 L~~~~~y~~---~~vwl~lAeCy~~l~~l~~~~~~~~d~~~~~~w~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~~~~ 368 (497)
.+.....+. ..+|..+|.||.+++..++- ...++.+. ..| .....-+... .++..
T Consensus 283 ~l~~~p~~~~~~~~~~~~l~~~~~~~g~~~~A-------------~~~~~~a~~~~p-----~~~~~~~~l~---~~~~~ 341 (450)
T 2y4t_A 283 VMKTEPSIAEYTVRSKERICHCFSKDEKPVEA-------------IRVCSEVLQMEP-----DNVNALKDRA---EAYLI 341 (450)
T ss_dssp HHHHCCSSHHHHHHHHHHHHHHHHTTTCHHHH-------------HHHHHHHHHHCT-----TCHHHHHHHH---HHHHH
T ss_pred HHhcCCcchHHHHHHHHHHHHHHHHCCCHHHH-------------HHHHHHHHHhCc-----ccHHHHHHHH---HHHHH
Confidence 776544432 33677777777776633211 11111111 011 0011111112 34556
Q ss_pred cCCcchhHHHHHHHHHhcCCCccchhhhh
Q psy7457 369 TGHIPHAYQLFRVLMLKNLDSKVVLNLMN 397 (497)
Q Consensus 369 ~~~~~~ay~~~r~~~~~~~~~~~~wnlfn 397 (497)
.|++..|-..++..+..+++.+.+|..+.
T Consensus 342 ~~~~~~A~~~~~~al~~~p~~~~~~~~l~ 370 (450)
T 2y4t_A 342 EEMYDEAIQDYETAQEHNENDQQIREGLE 370 (450)
T ss_dssp TTCHHHHHHHHHHHHTTSSSCHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHhCcchHHHHHHHH
Confidence 67888888888877776777766666654
No 10
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.37 E-value=2.9e-11 Score=114.55 Aligned_cols=247 Identities=9% Similarity=-0.057 Sum_probs=138.4
Q ss_pred CChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHH
Q psy7457 9 ENPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGY 88 (497)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y 88 (497)
.||.++...+...+.+ .+.++|+=+|.+++. .+|.+...+...+..+.+.|++. +|++.|
T Consensus 20 ~~~~~~~~~a~~~~~~-----g~~~~A~~~~~~~l~-------------~~p~~~~~~~~~~~~~~~~~~~~--~A~~~~ 79 (330)
T 3hym_B 20 ENLDVVVSLAERHYYN-----CDFKMCYKLTSVVME-------------KDPFHASCLPVHIGTLVELNKAN--ELFYLS 79 (330)
T ss_dssp CCCTTHHHHHHHHHHT-----TCHHHHHHHHHHHHH-------------HCTTCTTTHHHHHHHHHHHTCHH--HHHHHH
T ss_pred hhHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHH-------------cCCCChhhHHHHHHHHHHhhhHH--HHHHHH
Confidence 3555666665555544 233344444443332 35566666666666666666666 666666
Q ss_pred HHHHhccCCCCChhhHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHh
Q psy7457 89 QRYLKNITPDSDPQTILDLSTRAAHVYHTAR-NFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRF 167 (497)
Q Consensus 89 ~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~-~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~ 167 (497)
+++++. .|.+. .+...+|.+|...| +.++|++.+++++...|.. ......++.++...|+|++|++.+++.
T Consensus 80 ~~~~~~-~~~~~-----~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~--~~~~~~l~~~~~~~~~~~~A~~~~~~a 151 (330)
T 3hym_B 80 HKLVDL-YPSNP-----VSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTY--GPAWIAYGHSFAVESEHDQAMAAYFTA 151 (330)
T ss_dssp HHHHHH-CTTST-----HHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTC--THHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHh-CcCCH-----HHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCcc--HHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 666666 55554 45555666666666 6666666666666655543 233555666666666666666666554
Q ss_pred chheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhcc-ccCcccccccchh
Q psy7457 168 ANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLASL-KFDVEMYGTITVY 246 (497)
Q Consensus 168 ~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly 246 (497)
.... |. ..+....+|.++..+|+.+.+...+... ..++.. +. .+
T Consensus 152 ~~~~--------------------------~~------~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~-~~--~~ 196 (330)
T 3hym_B 152 AQLM--------------------------KG------CHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPED-PF--VM 196 (330)
T ss_dssp HHHT--------------------------TT------CSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTC-HH--HH
T ss_pred HHhc--------------------------cc------cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCC-hH--HH
Confidence 4310 11 1122333444444444444444444333 222221 12 22
Q ss_pred hhhHHHHHHHH-HHHHHHHhh------------------hhhhHHHHHHHHhcccHHHHHHHHHHHhcCCCCChHHHHHH
Q psy7457 247 LDIAEALIQEH-YEAYAVQFK------------------ELVYLDIAEALIQEHYEAYAVQVLVLLVSSEKYNQPGVWKQ 307 (497)
Q Consensus 247 ~~~~~~~~~~~-~~~~~~~~~------------------~~~~ldvaeAl~e~g~y~~Al~~l~~L~~~~~y~~~~vwl~ 307 (497)
+..+....+.. |+.+...|. ..++..+|.+|...|.+++|+.+|...+..... .+.+|..
T Consensus 197 ~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~-~~~~~~~ 275 (330)
T 3hym_B 197 HEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQ-NASTYSA 275 (330)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CSHHHHH
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCcc-chHHHHH
Confidence 23333333222 333333332 014489999999999999999999999876544 4567999
Q ss_pred HHHHHHHhhhcc
Q psy7457 308 LAETYEKSECLS 319 (497)
Q Consensus 308 lAeCy~~l~~l~ 319 (497)
+|.||.+++..+
T Consensus 276 la~~~~~~g~~~ 287 (330)
T 3hym_B 276 IGYIHSLMGNFE 287 (330)
T ss_dssp HHHHHHHHTCHH
T ss_pred HHHHHHHhccHH
Confidence 999999977544
No 11
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.37 E-value=2.6e-11 Score=119.90 Aligned_cols=192 Identities=10% Similarity=0.035 Sum_probs=138.4
Q ss_pred hcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q psy7457 55 RGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQY 134 (497)
Q Consensus 55 ~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~ 134 (497)
+...+|++.+.+..++.+|.+.|++. +|++.|+++++. .|.+. .+...++.+|...|+.++|++.|++++..
T Consensus 93 al~~~p~~~~~~~~l~~~~~~~g~~~--~A~~~~~~al~~-~p~~~-----~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 164 (388)
T 1w3b_A 93 ALRLKPDFIDGYINLAAALVAAGDME--GAVQAYVSALQY-NPDLY-----CVRSDLGNLLKALGRLEEAKACYLKAIET 164 (388)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHHSCSS--HHHHHHHHHHHH-CTTCT-----HHHHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred HHHcCcchHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHh-CCCcH-----HHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 33347888888889999999999999 999999999988 88775 56778888999999999999999999888
Q ss_pred ccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHH
Q psy7457 135 SAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFV 214 (497)
Q Consensus 135 ~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLg 214 (497)
.|+. ..-.+.++.++...|++.+|+..+++....- |+ -++....+|
T Consensus 165 ~p~~--~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~--------------------------p~------~~~~~~~lg 210 (388)
T 1w3b_A 165 QPNF--AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLD--------------------------PN------FLDAYINLG 210 (388)
T ss_dssp CTTC--HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC--------------------------TT------CHHHHHHHH
T ss_pred CCCC--HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC--------------------------CC------cHHHHHHHH
Confidence 8864 4556778888888899999988887765310 33 246788888
Q ss_pred HHHhhcCCCCchhHHhhcc-ccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHHHHHHHH
Q psy7457 215 ITLVHLRSETQFPTLLASL-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAVQVLVLL 293 (497)
Q Consensus 215 I~ll~Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al~~l~~L 293 (497)
.++..+|..+++...+... ..+|. ... .+ ..+|.+|...|.+++|+..|...
T Consensus 211 ~~~~~~~~~~~A~~~~~~al~~~p~-~~~--~~------------------------~~l~~~~~~~g~~~~A~~~~~~a 263 (388)
T 1w3b_A 211 NVLKEARIFDRAVAAYLRALSLSPN-HAV--VH------------------------GNLACVYYEQGLIDLAIDTYRRA 263 (388)
T ss_dssp HHHHTTTCTTHHHHHHHHHHHHCTT-CHH--HH------------------------HHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHhhCcC-CHH--HH------------------------HHHHHHHHHcCCHHHHHHHHHHH
Confidence 8888888888877776555 44442 223 55 56666666666666666666666
Q ss_pred hcCCCCChHHHHHHHHHHHHHhh
Q psy7457 294 VSSEKYNQPGVWKQLAETYEKSE 316 (497)
Q Consensus 294 ~~~~~y~~~~vwl~lAeCy~~l~ 316 (497)
+..... .+.+|..+|.+|.+.+
T Consensus 264 l~~~p~-~~~~~~~l~~~~~~~g 285 (388)
T 1w3b_A 264 IELQPH-FPDAYCNLANALKEKG 285 (388)
T ss_dssp HHTCSS-CHHHHHHHHHHHHHHS
T ss_pred HhhCCC-CHHHHHHHHHHHHHcC
Confidence 554332 2334666666665544
No 12
>1dcu_A Fructose-1,6-bisphosphatase; chloroplast, photosynthesis, redox regulation, thioredoxin, allostery, hydrolase; 2.20A {Pisum sativum} SCOP: e.7.1.1 PDB: 1d9q_A 1dbz_A 1spi_A
Probab=99.36 E-value=4.1e-13 Score=138.54 Aligned_cols=91 Identities=33% Similarity=0.361 Sum_probs=69.7
Q ss_pred CCccchhHHHHHhhhcCCCCccc--cccc------------------ccccccccCcCCcchhhhhhhhhhhHHHHHHhc
Q psy7457 403 SSDIRIVRNTLRTFQSKPNNLGL--NVMY------------------ANNCNLTSNVNVQGEEVKKLDVLSNELFVNMLT 462 (497)
Q Consensus 403 t~~iTL~rfLl~~~~~~p~~~~~--~LL~------------------~~~~g~aGs~N~~GE~QkkLDV~Anelf~~aL~ 462 (497)
.+.+||++||++.+.+++. +++ .+|+ .+..|.+|+.|++||.|++||+++|++|+++|+
T Consensus 16 ~~~~tl~~~l~~~~~~~~~-~~~l~~ll~~i~~A~k~Ia~~v~~a~l~~~~g~~g~~N~~Gd~qkkLDv~an~i~~~~L~ 94 (357)
T 1dcu_A 16 YEIITLTSWLLQQEQKGII-DAELTIVLSSISMACKQIASLVQRANISNLTGTQGAVNIQGEDQKKLDVISNEVFSNCLR 94 (357)
T ss_dssp CCCCBHHHHHHHHHHTTSS-CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC--------CHHHHHHHHHHHHHHHHTT
T ss_pred cCcccHHHHHHHHhhcCCC-cHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCCCChhHHHHHHHHHHHHHHHH
Confidence 4578999999998887665 444 4554 366788999999999999999999999999999
Q ss_pred cccCeeEEecCCCCceeecCCCCCCCCCeEEEec
Q psy7457 463 SSYSTCLLVSEENETALEIHHQEASTGDPCVRLD 496 (497)
Q Consensus 463 ~s~~Va~~aSEE~e~~i~v~~~~~~~G~Y~V~fD 496 (497)
+++.+++++|||+++++.+++ ...|+|+|+||
T Consensus 95 ~~~~~~~iaSEE~~~~~~~~~--~~~g~y~v~fD 126 (357)
T 1dcu_A 95 SSGRTGIIASEEEDVPVAVEE--SYSGNYIVVFD 126 (357)
T ss_dssp TTEEEEEECCCSSCCCEEEEE--ETTSSCEEEEE
T ss_pred hcCCceEEEcCCCCccccccc--CCCCCeEEEEe
Confidence 999999999999999998752 22689999999
No 13
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.36 E-value=5.5e-12 Score=117.44 Aligned_cols=197 Identities=16% Similarity=0.016 Sum_probs=154.2
Q ss_pred CChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHH
Q psy7457 9 ENPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGY 88 (497)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y 88 (497)
++|+.|+.++...+.+ ..+++|+=+|.+++. .+|++.+.++.++.+|.+.|++. +|++.|
T Consensus 3 ~~~~~~~~lg~~~~~~-----g~~~~A~~~~~~al~-------------~~p~~~~a~~~lg~~~~~~g~~~--~A~~~~ 62 (217)
T 2pl2_A 3 TAEQNPLRLGVQLYAL-----GRYDAALTLFERALK-------------ENPQDPEALYWLARTQLKLGLVN--PALENG 62 (217)
T ss_dssp -CCHHHHHHHHHHHHT-----TCHHHHHHHHHHHHT-------------TSSSCHHHHHHHHHHHHHTTCHH--HHHHHH
T ss_pred CcHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHH-------------hCCCCHHHHHHHHHHHHHcCCHH--HHHHHH
Confidence 4678888887766543 456777777777776 49999999999999999999999 999999
Q ss_pred HHHHhccCCCCChhhHHHHHHHHHHHHHhc-----------CCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhhccH
Q psy7457 89 QRYLKNITPDSDPQTILDLSTRAAHVYHTA-----------RNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLELKRY 157 (497)
Q Consensus 89 ~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~-----------~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k~y 157 (497)
++.++. .|.+. .....++.+|... |+.++|+..|+++++..|+. ..-...++.+|..+|+|
T Consensus 63 ~~al~~-~P~~~-----~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~--~~~~~~lg~~~~~~g~~ 134 (217)
T 2pl2_A 63 KTLVAR-TPRYL-----GGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRY--APLHLQRGLVYALLGER 134 (217)
T ss_dssp HHHHHH-CTTCH-----HHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTC--HHHHHHHHHHHHHTTCH
T ss_pred HHHHHh-CCCcH-----HHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCccc--HHHHHHHHHHHHHcCCh
Confidence 999999 89875 6778999999999 99999999999999999964 56678899999999999
Q ss_pred HHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhcc-ccC
Q psy7457 158 ETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLASL-KFD 236 (497)
Q Consensus 158 ~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l-~e~ 236 (497)
++|+..+++....- - ..+++..+|.++..+|+.+++...++.. ..+
T Consensus 135 ~~A~~~~~~al~~~-----------------------------~----~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 181 (217)
T 2pl2_A 135 DKAEASLKQALALE-----------------------------D----TPEIRSALAELYLSMGRLDEALAQYAKALEQA 181 (217)
T ss_dssp HHHHHHHHHHHHHC-----------------------------C----CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhcc-----------------------------c----chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 99999999876521 1 4567889999999999999988888777 555
Q ss_pred cccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHHHHHHHH
Q psy7457 237 VEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAVQVLVLL 293 (497)
Q Consensus 237 ~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al~~l~~L 293 (497)
| +..+ .+ ..+|.+|...|.+++|+..|...
T Consensus 182 P-~~~~--~~------------------------~~la~~~~~~g~~~~A~~~~~~~ 211 (217)
T 2pl2_A 182 P-KDLD--LR------------------------VRYASALLLKGKAEEAARAAALE 211 (217)
T ss_dssp T-TCHH--HH------------------------HHHHHHHTC--------------
T ss_pred C-CChH--HH------------------------HHHHHHHHHccCHHHHHHHHHHH
Confidence 5 3345 77 89999999999999999998754
No 14
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.35 E-value=1.6e-12 Score=127.26 Aligned_cols=211 Identities=9% Similarity=0.038 Sum_probs=163.4
Q ss_pred hhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhh-----HHHHHHHHHHHHHhcCCH
Q psy7457 47 KIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQT-----ILDLSTRAAHVYHTARNF 121 (497)
Q Consensus 47 ~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~-----~~~~~k~LA~~Y~e~~~~ 121 (497)
+...++.++...+|++...+...+.+|...|++. +|++.|+++++. .|.+...+ ...+...++..|...|++
T Consensus 117 ~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~--~A~~~~~~al~~-~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 193 (365)
T 4eqf_A 117 AAIVALQRCLELQPNNLKALMALAVSYTNTSHQQ--DACEALKNWIKQ-NPKYKYLVKNKKGSPGLTRRMSKSPVDSSVL 193 (365)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-CHHHHCC-------------------CCHHH
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHccccHH--HHHHHHHHHHHh-CccchHHHhhhccchHHHHHHHHHHhhhhhH
Confidence 3444556667779999999999999999999999 999999999999 77653211 123456779999999999
Q ss_pred HHHHHHHHHHHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCC
Q psy7457 122 PQAASSLAIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDP 201 (497)
Q Consensus 122 ~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l 201 (497)
++|++.|++++...|...+....+.++.+|...|+|++|++.+++..... |.+
T Consensus 194 ~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~--------------------------p~~- 246 (365)
T 4eqf_A 194 EGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVR--------------------------PED- 246 (365)
T ss_dssp HHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--------------------------TTC-
T ss_pred HHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC--------------------------CCC-
Confidence 99999999999999997788889999999999999999999998866421 332
Q ss_pred CCCCCcchhHHHHHHHhhcCCCCchhHHhhcc-ccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhc
Q psy7457 202 NLVPPPEILSKFVITLVHLRSETQFPTLLASL-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQE 280 (497)
Q Consensus 202 ~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~ 280 (497)
.+....+|.++..+|+.+++...+... ..+|. ... .+ ..+|.+|...
T Consensus 247 -----~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~--~~------------------------~~l~~~~~~~ 294 (365)
T 4eqf_A 247 -----YSLWNRLGATLANGDRSEEAVEAYTRALEIQPG-FIR--SR------------------------YNLGISCINL 294 (365)
T ss_dssp -----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHH--HH------------------------HHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-chH--HH------------------------HHHHHHHHHC
Confidence 357889999999999999988887766 44443 244 67 8999999999
Q ss_pred ccHHHHHHHHHHHhcCCCCC-----------hHHHHHHHHHHHHHhhhcc
Q psy7457 281 HYEAYAVQVLVLLVSSEKYN-----------QPGVWKQLAETYEKSECLS 319 (497)
Q Consensus 281 g~y~~Al~~l~~L~~~~~y~-----------~~~vwl~lAeCy~~l~~l~ 319 (497)
|.|++|+.+|...+....-. ...+|..++.|+..++..+
T Consensus 295 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 344 (365)
T 4eqf_A 295 GAYREAVSNFLTALSLQRKSRNQQQVPHPAISGNIWAALRIALSLMDQPE 344 (365)
T ss_dssp TCCHHHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHHTCHH
T ss_pred CCHHHHHHHHHHHHHhCcccCCCcccchhhhHHHHHHHHHHHHHHcCcHH
Confidence 99999999999887754321 3678999999999877544
No 15
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.34 E-value=2.2e-11 Score=126.61 Aligned_cols=251 Identities=10% Similarity=0.015 Sum_probs=154.6
Q ss_pred CCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCC
Q psy7457 59 KDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHL 138 (497)
Q Consensus 59 ~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~ 138 (497)
+|++...+...+.+|.+.|+.. .|++.|+++++. .|.+. .+...++.+|.+.|++++|++.|++++...|..
T Consensus 335 ~~~~~~~~~~l~~~~~~~g~~~--~A~~~~~~~~~~-~~~~~-----~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~ 406 (597)
T 2xpi_A 335 DPYNLDVYPLHLASLHESGEKN--KLYLISNDLVDR-HPEKA-----VTWLAVGIYYLCVNKISEARRYFSKSSTMDPQF 406 (597)
T ss_dssp CTTCCTTHHHHHHHHHHHTCHH--HHHHHHHHHHHH-CTTSH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred CcccHHHHHHHHHHHHHhCCHH--HHHHHHHHHHhh-CcccH-----HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC
Confidence 4555666666666666666666 666666666665 55442 344556666666666666666666666655532
Q ss_pred CChhHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHh
Q psy7457 139 IRPEHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLV 218 (497)
Q Consensus 139 f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll 218 (497)
....+.++.+|...|++++|++++++.... .|+ .......+|.++.
T Consensus 407 --~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~--------------------------~~~------~~~~~~~l~~~~~ 452 (597)
T 2xpi_A 407 --GPAWIGFAHSFAIEGEHDQAISAYTTAARL--------------------------FQG------THLPYLFLGMQHM 452 (597)
T ss_dssp --HHHHHHHHHHHHHHTCHHHHHHHHHHHHHT--------------------------TTT------CSHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------------------------Ccc------chHHHHHHHHHHH
Confidence 344556666666666666666666554321 022 1245556666777
Q ss_pred hcCCCCchhHHhhcc-ccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHHHHHHHHhcC-
Q psy7457 219 HLRSETQFPTLLASL-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAVQVLVLLVSS- 296 (497)
Q Consensus 219 ~Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al~~l~~L~~~- 296 (497)
+.|+.+++..++... ..++. ... .| ..+|.+|...|.+++|+++|...+..
T Consensus 453 ~~g~~~~A~~~~~~~~~~~~~-~~~--~~------------------------~~l~~~~~~~g~~~~A~~~~~~~~~~~ 505 (597)
T 2xpi_A 453 QLGNILLANEYLQSSYALFQY-DPL--LL------------------------NELGVVAFNKSDMQTAINHFQNALLLV 505 (597)
T ss_dssp HHTCHHHHHHHHHHHHHHCCC-CHH--HH------------------------HHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCC-ChH--HH------------------------HHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence 777776666666555 33332 122 45 99999999999999999999998775
Q ss_pred -----CCCChHHHHHHHHHHHHHhhhccCcccccccCCCchHHHHHHHhhhhhcccccccHHHHhhccccccccccccCC
Q psy7457 297 -----EKYNQPGVWKQLAETYEKSECLSGVVVSTVDTGSGSWWFQSMSSAMCSTVLIKDSTEHLDQLSLDATTVLYKTGH 371 (497)
Q Consensus 297 -----~~y~~~~vwl~lAeCy~~l~~l~~~~~~~~d~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~ 371 (497)
+..+.+.+|..+|.+|.+.+..++-. +++...++. .| .....-.... .++...|+
T Consensus 506 ~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~---------~~~~~~~~~---~p-----~~~~~~~~l~---~~~~~~g~ 565 (597)
T 2xpi_A 506 KKTQSNEKPWAATWANLGHAYRKLKMYDAAI---------DALNQGLLL---ST-----NDANVHTAIA---LVYLHKKI 565 (597)
T ss_dssp HHSCCCSGGGHHHHHHHHHHHHHTTCHHHHH---------HHHHHHHHH---SS-----CCHHHHHHHH---HHHHHTTC
T ss_pred hccccchhhHHHHHHHHHHHHHHhcCHHHHH---------HHHHHHHHh---CC-----CChHHHHHHH---HHHHHhCC
Confidence 22223778999999999977443111 112222211 11 0111111112 34556799
Q ss_pred cchhHHHHHHHHHhcCCCccchhhhhc
Q psy7457 372 IPHAYQLFRVLMLKNLDSKVVLNLMNL 398 (497)
Q Consensus 372 ~~~ay~~~r~~~~~~~~~~~~wnlfn~ 398 (497)
+..|..+++.++..+++....|.++..
T Consensus 566 ~~~A~~~~~~~l~~~p~~~~~~~~l~~ 592 (597)
T 2xpi_A 566 PGLAITHLHESLAISPNEIMASDLLKR 592 (597)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCChHHHHHHHH
Confidence 999999999999888888888877655
No 16
>2fhy_A Fructose-1,6-bisphosphatase 1; allosteric inhibitors human fbpase, benzoxazole, intersubunit allosteric inhibition of human fpbase, hydrolase; HET: A37; 2.95A {Homo sapiens}
Probab=99.33 E-value=5.6e-13 Score=138.26 Aligned_cols=109 Identities=30% Similarity=0.462 Sum_probs=68.4
Q ss_pred hcCCCccchhhhhccccCCCccchhHHHHHhhhcCCCCccc--cccc---------------c---cccccccCcCCcch
Q psy7457 385 KNLDSKVVLNLMNLITLRSSDIRIVRNTLRTFQSKPNNLGL--NVMY---------------A---NNCNLTSNVNVQGE 444 (497)
Q Consensus 385 ~~~~~~~~wnlfn~~~~~t~~iTL~rfLl~~~~~~p~~~~~--~LL~---------------~---~~~g~aGs~N~~GE 444 (497)
..+++.+-.-+.++..+.++++||++||++.+.++|. +++ .+|+ + +..|.+|+.|++||
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~~~~~~~-~~~l~~ll~~i~~a~k~I~~~v~~a~l~~~~g~~~~~N~~Gd 105 (374)
T 2fhy_A 27 DDDDKDHPFTMADQAPFDTDVNTLTRFVMEEGRKARG-TGELTQLLNSLCTAVKAISSAVRKAGIAHLYGIAGSTNVTGD 105 (374)
T ss_dssp -------------------CCCBHHHHHHHHHHHTTC-CSHHHHHHHHHHHHHHHHHHHHTTTTHHHHTTSSCC------
T ss_pred CCCCCCCCcccccCCCCCCCceeHHHHHHHHhhcCCC-chHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCCCc
Confidence 4445566677778877788889999999999888876 444 4554 2 34678899999999
Q ss_pred hhhhhhhhhhHHHHHHhccccCeeEEecCCCCceeecCCCCCCCCCeEEEec
Q psy7457 445 EVKKLDVLSNELFVNMLTSSYSTCLLVSEENETALEIHHQEASTGDPCVRLD 496 (497)
Q Consensus 445 ~QkkLDV~Anelf~~aL~~s~~Va~~aSEE~e~~i~v~~~~~~~G~Y~V~fD 496 (497)
.|++||+++|++|+++|++++.+++++|||+++++.+++ ...|+|+|+||
T Consensus 106 ~qkklDv~an~~~i~~L~~~~~~~~i~SEE~~~~~~~~~--~~~g~y~v~~D 155 (374)
T 2fhy_A 106 QVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEP--EKRGKYVVCFD 155 (374)
T ss_dssp ---CHHHHHHHHHHHHHHTTTCEEEEEETTCSSCEECCG--GGEEEEEEEEE
T ss_pred hhhHHHHHHHHHHHHHHHhcCCceEEEeCCCCcccccCC--CCCCCeEEEEe
Confidence 999999999999999999999999999999999998875 11289999999
No 17
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.33 E-value=3.1e-11 Score=109.86 Aligned_cols=214 Identities=10% Similarity=0.043 Sum_probs=160.7
Q ss_pred ChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHH
Q psy7457 10 NPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQ 89 (497)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~ 89 (497)
.|+.|+.++.. -....+.++|+-+|.+++. .+|++...+..++.+|...|++. +|++.|+
T Consensus 22 ~~~~~~~~a~~-----~~~~~~~~~A~~~~~~~l~-------------~~~~~~~~~~~la~~~~~~~~~~--~A~~~~~ 81 (243)
T 2q7f_A 22 ASMTGGQQMGR-----GSEFGDYEKAAEAFTKAIE-------------ENKEDAIPYINFANLLSSVNELE--RALAFYD 81 (243)
T ss_dssp -------------------------CCTTHHHHHT-------------TCTTCHHHHHHHHHHHHHTTCHH--HHHHHHH
T ss_pred HHHHHHHHHHH-----HHHhhCHHHHHHHHHHHHH-------------hCcccHHHHHHHHHHHHHcCCHH--HHHHHHH
Confidence 44455544443 3445677888888888776 47888999999999999999999 9999999
Q ss_pred HHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 90 RYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 90 ~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
++++. .|.+. .+...+|.+|...|+.++|++.+++++...|.. ..-...++.++...|+|++|++.+++...
T Consensus 82 ~~~~~-~~~~~-----~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~--~~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 153 (243)
T 2q7f_A 82 KALEL-DSSAA-----TAYYGAGNVYVVKEMYKEAKDMFEKALRAGMEN--GDLFYMLGTVLVKLEQPKLALPYLQRAVE 153 (243)
T ss_dssp HHHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCS--HHHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred HHHHc-CCcch-----HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 99999 88764 688899999999999999999999999999864 45678899999999999999999988664
Q ss_pred heeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhcc-ccCcccccccchhhh
Q psy7457 170 IEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLASL-KFDVEMYGTITVYLD 248 (497)
Q Consensus 170 ~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly~~ 248 (497)
.. |. ..++...+|.++..+|+.+.+...+... ..++ +..+ .+
T Consensus 154 ~~--------------------------~~------~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~-~~~~--~~-- 196 (243)
T 2q7f_A 154 LN--------------------------EN------DTEARFQFGMCLANEGMLDEALSQFAAVTEQDP-GHAD--AF-- 196 (243)
T ss_dssp HC--------------------------TT------CHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCT-TCHH--HH--
T ss_pred hC--------------------------Cc------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc-ccHH--HH--
Confidence 21 23 2457888999999999999988887666 4443 2344 66
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHHHHHHHHhcCCCCChHHHHHHHHHH
Q psy7457 249 IAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAVQVLVLLVSSEKYNQPGVWKQLAET 311 (497)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al~~l~~L~~~~~y~~~~vwl~lAeC 311 (497)
..+|.+|...|++.+|+.+|...+.....+.. +|..++..
T Consensus 197 ----------------------~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~-~~~~~~~l 236 (243)
T 2q7f_A 197 ----------------------YNAGVTYAYKENREKALEMLDKAIDIQPDHML-ALHAKKLL 236 (243)
T ss_dssp ----------------------HHHHHHHHHTTCTTHHHHHHHHHHHHCTTCHH-HHHHHTC-
T ss_pred ----------------------HHHHHHHHHccCHHHHHHHHHHHHccCcchHH-HHHHHHHH
Confidence 99999999999999999999999887655443 35555543
No 18
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.31 E-value=5.8e-11 Score=115.12 Aligned_cols=250 Identities=8% Similarity=-0.080 Sum_probs=162.0
Q ss_pred ccCCcccee-hhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHH
Q psy7457 29 VINPDESRY-ILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDL 107 (497)
Q Consensus 29 ~~~~~~~~y-~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~ 107 (497)
..+.++|+- +|.+++...+.. +..+...++.++..|.+.|++. +|++.|+++++. .|.+. .+
T Consensus 38 ~~~~~~a~~~~~~~a~~~~~~~---------~~~~~~~~~~~~~~~~~~g~~~--~A~~~~~~al~~-~p~~~-----~~ 100 (368)
T 1fch_A 38 LSDYDDLTSATYDKGYQFEEEN---------PLRDHPQPFEEGLRRLQEGDLP--NAVLLFEAAVQQ-DPKHM-----EA 100 (368)
T ss_dssp --------CHHHHCCCCCCSSC---------TTTTCSSHHHHHHHHHHTTCHH--HHHHHHHHHHHS-CTTCH-----HH
T ss_pred HHHHHHHHhhhhhHHHhcCCCC---------cccchHHHHHHHHHHHHCCCHH--HHHHHHHHHHHh-CCCCH-----HH
Confidence 345566666 777766642211 2224778999999999999999 999999999999 88774 67
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCcc
Q psy7457 108 STRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEE 187 (497)
Q Consensus 108 ~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~ 187 (497)
...+|.+|...|++++|++.|++++...|+. ..-.+.++.+|...|++++|++.+++..... ......+ .
T Consensus 101 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~--~~~~~~~------~ 170 (368)
T 1fch_A 101 WQYLGTTQAENEQELLAISALRRCLELKPDN--QTALMALAVSFTNESLQRQACEILRDWLRYT--PAYAHLV------T 170 (368)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTS--TTTGGGC------C
T ss_pred HHHHHHHHHHCcCHHHHHHHHHHHHhcCCCC--HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--cCcHHHH------H
Confidence 8899999999999999999999999999864 5668889999999999999999998866421 0000000 0
Q ss_pred ccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhcc-ccCccc-ccccchhhhhHHHHHHHH-HHHHHHH
Q psy7457 188 SNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLASL-KFDVEM-YGTITVYLDIAEALIQEH-YEAYAVQ 264 (497)
Q Consensus 188 ~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l-~e~~ee-~~D~~Ly~~~~~~~~~~~-~~~~~~~ 264 (497)
...... ... . |-.....++.++ ..|+.+.+...+... ..+|.. ... .++..+....... |+.+...
T Consensus 171 ~~~~~~---~~~-~----~~~~~~~~~~~~-~~~~~~~A~~~~~~a~~~~p~~~~~~--~~~~l~~~~~~~g~~~~A~~~ 239 (368)
T 1fch_A 171 PAEEGA---GGA-G----LGPSKRILGSLL-SDSLFLEVKELFLAAVRLDPTSIDPD--VQCGLGVLFNLSGEYDKAVDC 239 (368)
T ss_dssp -----------------------CTTHHHH-HHHHHHHHHHHHHHHHHHSTTSCCHH--HHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHh---hhh-c----ccHHHHHHHHHh-hcccHHHHHHHHHHHHHhCcCcccHH--HHHHHHHHHHHcCCHHHHHHH
Confidence 000000 000 0 222233566665 888888877777666 544442 233 6644455444433 6666655
Q ss_pred hh---------hhhhHHHHHHHHhcccHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHhhh
Q psy7457 265 FK---------ELVYLDIAEALIQEHYEAYAVQVLVLLVSSEKYNQPGVWKQLAETYEKSEC 317 (497)
Q Consensus 265 ~~---------~~~~ldvaeAl~e~g~y~~Al~~l~~L~~~~~y~~~~vwl~lAeCy~~l~~ 317 (497)
|. ..++..+|.+|...|.+.+|+.+|...+.... +.+.+|..+|.||.+++.
T Consensus 240 ~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~-~~~~~~~~l~~~~~~~g~ 300 (368)
T 1fch_A 240 FTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQP-GYIRSRYNLGISCINLGA 300 (368)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CcHHHHHHHHHHHHHCCC
Confidence 55 12667777777777777777777777666543 334557777777776553
No 19
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.29 E-value=1.1e-10 Score=110.09 Aligned_cols=207 Identities=10% Similarity=-0.026 Sum_probs=163.7
Q ss_pred CCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHcc
Q psy7457 57 LSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSA 136 (497)
Q Consensus 57 ~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~ 136 (497)
..+|.+.+.++.++..+.+.|++. +|++.|+++++. .|.++ ...++.-.+|.+|...|++++|+..|++++..+|
T Consensus 9 ~~~~~~~~~~~~~a~~~~~~g~~~--~A~~~~~~~l~~-~p~~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p 83 (261)
T 3qky_A 9 RLRHSSPQEAFERAMEFYNQGKYD--RAIEYFKAVFTY-GRTHE--WAADAQFYLARAYYQNKEYLLAASEYERFIQIYQ 83 (261)
T ss_dssp --CCSSHHHHHHHHHHHHHTTCHH--HHHHHHHHHGGG-CSCST--THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred CCCCCCHHHHHHHHHHHHHhCCHH--HHHHHHHHHHHh-CCCCc--chHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCC
Confidence 457889999999999999999999 999999999999 99874 2246888999999999999999999999999999
Q ss_pred CCCC-hhHHHHHHHHHHh--------hccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCc
Q psy7457 137 HLIR-PEHCNLYLEVLLE--------LKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPP 207 (497)
Q Consensus 137 ~~f~-~~~vNiLaEL~i~--------~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPi 207 (497)
+.-. ......++..+.. .|+|.+|+..+++..... |++. ...
T Consensus 84 ~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~--------------------------p~~~---~~~ 134 (261)
T 3qky_A 84 IDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRY--------------------------PNHE---LVD 134 (261)
T ss_dssp TCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHC--------------------------TTCT---THH
T ss_pred CCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHC--------------------------cCch---hHH
Confidence 7644 4457788889998 999999999999876421 3322 022
Q ss_pred chh--------------HHHHHHHhhcCCCCchhHHhhcc-ccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHH
Q psy7457 208 EIL--------------SKFVITLVHLRSETQFPTLLASL-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLD 272 (497)
Q Consensus 208 DLr--------------~KLgI~ll~Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ld 272 (497)
+.+ ..+|.++..+|+.+.+...+..+ ...|......+.+ +.
T Consensus 135 ~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~------------------------~~ 190 (261)
T 3qky_A 135 DATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDAL------------------------VG 190 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHH------------------------HH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHH------------------------HH
Confidence 333 78899999999999988888776 5545432221256 88
Q ss_pred HHHHHHhc----------ccHHHHHHHHHHHhcCCCCC--hHHHHHHHHHHHHHhhhccCc
Q psy7457 273 IAEALIQE----------HYEAYAVQVLVLLVSSEKYN--QPGVWKQLAETYEKSECLSGV 321 (497)
Q Consensus 273 vaeAl~e~----------g~y~~Al~~l~~L~~~~~y~--~~~vwl~lAeCy~~l~~l~~~ 321 (497)
+|.+|... |.+++|+..|..++....-+ .......+++|+.+++.+++.
T Consensus 191 l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~~~~~~~~~~~~ 251 (261)
T 3qky_A 191 AMRAYIAYAEQSVRARQPERYRRAVELYERLLQIFPDSPLLRTAEELYTRARQRLTELEGD 251 (261)
T ss_dssp HHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhcccchhhcccchHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999877 99999999999998766544 234577889999998877643
No 20
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.28 E-value=1.7e-10 Score=106.41 Aligned_cols=195 Identities=16% Similarity=0.070 Sum_probs=159.8
Q ss_pred cCCCCcc-HHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q psy7457 56 GLSKDTI-LDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQY 134 (497)
Q Consensus 56 ~~~~p~n-~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~ 134 (497)
...+|++ ...+..++..|...|++. +|++.|+++++. .|.+. .+...+|.+|...|+.++|++.|++++..
T Consensus 29 ~~~~~~~~~~~~~~~a~~~~~~~~~~--~A~~~~~~al~~-~~~~~-----~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 100 (252)
T 2ho1_A 29 TDKGRDEARDAYIQLGLGYLQRGNTE--QAKVPLRKALEI-DPSSA-----DAHAALAVVFQTEMEPKLADEEYRKALAS 100 (252)
T ss_dssp --CCHHHHHHHHHHHHHHHHHTTCTG--GGHHHHHHHHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHHcCChH--HHHHHHHHHHhc-CCChH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 3456776 899999999999999999 999999999999 88774 68889999999999999999999999999
Q ss_pred ccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHH
Q psy7457 135 SAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFV 214 (497)
Q Consensus 135 ~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLg 214 (497)
.|.. ..-...++.+|...|+|++|++.+++... . .. .|. .......+|
T Consensus 101 ~~~~--~~~~~~la~~~~~~g~~~~A~~~~~~~~~--~--~~--------------------~~~------~~~~~~~la 148 (252)
T 2ho1_A 101 DSRN--ARVLNNYGGFLYEQKRYEEAYQRLLEASQ--D--TL--------------------YPE------RSRVFENLG 148 (252)
T ss_dssp CTTC--HHHHHHHHHHHHHTTCHHHHHHHHHHHTT--C--TT--------------------CTT------HHHHHHHHH
T ss_pred CcCc--HHHHHHHHHHHHHHhHHHHHHHHHHHHHh--C--cc--------------------Ccc------cHHHHHHHH
Confidence 8864 56788899999999999999999988663 0 00 022 246778899
Q ss_pred HHHhhcCCCCchhHHhhcc-ccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHHHHHHHH
Q psy7457 215 ITLVHLRSETQFPTLLASL-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAVQVLVLL 293 (497)
Q Consensus 215 I~ll~Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al~~l~~L 293 (497)
.++..+|+.+++...+... ..++. ... .+ ..+|.+|...|.+++|+.+|...
T Consensus 149 ~~~~~~g~~~~A~~~~~~~~~~~~~-~~~--~~------------------------~~la~~~~~~g~~~~A~~~~~~~ 201 (252)
T 2ho1_A 149 LVSLQMKKPAQAKEYFEKSLRLNRN-QPS--VA------------------------LEMADLLYKEREYVPARQYYDLF 201 (252)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCSC-CHH--HH------------------------HHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHhcCcc-cHH--HH------------------------HHHHHHHHHcCCHHHHHHHHHHH
Confidence 9999999999888887666 44442 234 66 89999999999999999999998
Q ss_pred hcCCCCChHHHHHHHHHHHHHhhhc
Q psy7457 294 VSSEKYNQPGVWKQLAETYEKSECL 318 (497)
Q Consensus 294 ~~~~~y~~~~vwl~lAeCy~~l~~l 318 (497)
+.... +.+..|..++.||.+.+..
T Consensus 202 ~~~~~-~~~~~~~~~~~~~~~~g~~ 225 (252)
T 2ho1_A 202 AQGGG-QNARSLLLGIRLAKVFEDR 225 (252)
T ss_dssp HTTSC-CCHHHHHHHHHHHHHTTCH
T ss_pred HHhCc-CcHHHHHHHHHHHHHccCH
Confidence 88655 4456689999999886643
No 21
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.28 E-value=4.1e-11 Score=109.45 Aligned_cols=217 Identities=11% Similarity=-0.010 Sum_probs=169.2
Q ss_pred ChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHH
Q psy7457 10 NPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQ 89 (497)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~ 89 (497)
.++.|..+++..+. ..+.++|+-+|.+++.. + ++...+..++.+|...|++. +|++.|+
T Consensus 4 ~a~~~~~~g~~~~~-----~~~~~~A~~~~~~a~~~-------------~-~~~~~~~~~~~~~~~~~~~~--~A~~~~~ 62 (258)
T 3uq3_A 4 MADKEKAEGNKFYK-----ARQFDEAIEHYNKAWEL-------------H-KDITYLNNRAAAEYEKGEYE--TAISTLN 62 (258)
T ss_dssp HHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHH-------------S-CCTHHHHHHHHHHHHTTCHH--HHHHHHH
T ss_pred HHHHHHHHHHHHHH-----hccHHHHHHHHHHHHHh-------------h-ccHHHHHHHHHHHHHcccHH--HHHHHHH
Confidence 35667777766654 35678888888888874 3 56889999999999999999 9999999
Q ss_pred HHHhccCCCCC--hhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHh
Q psy7457 90 RYLKNITPDSD--PQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRF 167 (497)
Q Consensus 90 ~il~~~~P~d~--~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~ 167 (497)
++++. .|.+. ......+...+|.+|...|+.++|++.+++++...|. .+.+...+++++|++.+.+.
T Consensus 63 ~a~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~----------~~~~~~~~~~~~a~~~~~~~ 131 (258)
T 3uq3_A 63 DAVEQ-GREMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRT----------ADILTKLRNAEKELKKAEAE 131 (258)
T ss_dssp HHHHH-HHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC----------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHh-CcccccchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCch----------hHHHHHHhHHHHHHHHHHHH
Confidence 99999 88663 2233578899999999999999999999999998886 46788889999999988875
Q ss_pred chheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhcc-ccCcccccccchh
Q psy7457 168 ANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLASL-KFDVEMYGTITVY 246 (497)
Q Consensus 168 ~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly 246 (497)
.... |. ..++...+|.++.++|+.+.+...+... ..++. ... .+
T Consensus 132 ~~~~--------------------------~~------~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~--~~ 176 (258)
T 3uq3_A 132 AYVN--------------------------PE------KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DAR--GY 176 (258)
T ss_dssp HHCC--------------------------HH------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHH--HH
T ss_pred HHcC--------------------------cc------hHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcc-cHH--HH
Confidence 5310 22 2356778888999999888877777666 44443 234 66
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHhhhc
Q psy7457 247 LDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAVQVLVLLVSSEKYNQPGVWKQLAETYEKSECL 318 (497)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al~~l~~L~~~~~y~~~~vwl~lAeCy~~l~~l 318 (497)
..+|.+|...|.|.+|+.+|...+..... .+.+|..+|.||.+++..
T Consensus 177 ------------------------~~l~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~g~~ 223 (258)
T 3uq3_A 177 ------------------------SNRAAALAKLMSFPEAIADCNKAIEKDPN-FVRAYIRKATAQIAVKEY 223 (258)
T ss_dssp ------------------------HHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCH
T ss_pred ------------------------HHHHHHHHHhCCHHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhhH
Confidence 88888888888888888888888776544 355688888888886643
No 22
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.28 E-value=1.7e-10 Score=103.15 Aligned_cols=192 Identities=11% Similarity=-0.044 Sum_probs=158.1
Q ss_pred CCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccC
Q psy7457 58 SKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAH 137 (497)
Q Consensus 58 ~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~ 137 (497)
.+|++...+..++..|...|++. +|++.|+++++. .|.+. .+...+|.+|...|+.++|++.+++++...|.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~--~A~~~~~~~~~~-~~~~~-----~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~ 74 (225)
T 2vq2_A 3 KANQVSNIKTQLAMEYMRGQDYR--QATASIEDALKS-DPKNE-----LAWLVRAEIYQYLKVNDKAQESFRQALSIKPD 74 (225)
T ss_dssp -CCHHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred CCcccHHHHHHHHHHHHHHhhHH--HHHHHHHHHHHh-Cccch-----HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC
Confidence 57889999999999999999999 999999999999 88774 67889999999999999999999999999886
Q ss_pred CCChhHHHHHHHHHHhh-ccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHH
Q psy7457 138 LIRPEHCNLYLEVLLEL-KRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVIT 216 (497)
Q Consensus 138 ~f~~~~vNiLaEL~i~~-k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ 216 (497)
. ..-...++.++... |+|++|++.+++... . .. .|. ...+...+|.+
T Consensus 75 ~--~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~--~---~~-------------------~~~------~~~~~~~l~~~ 122 (225)
T 2vq2_A 75 S--AEINNNYGWFLCGRLNRPAESMAYFDKALA--D---PT-------------------YPT------PYIANLNKGIC 122 (225)
T ss_dssp C--HHHHHHHHHHHHTTTCCHHHHHHHHHHHHT--S---TT-------------------CSC------HHHHHHHHHHH
T ss_pred C--hHHHHHHHHHHHHhcCcHHHHHHHHHHHHc--C---cC-------------------Ccc------hHHHHHHHHHH
Confidence 4 45678899999999 999999999988653 0 00 011 24678889999
Q ss_pred HhhcCCCCchhHHhhcc-ccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHHHHHHHHhc
Q psy7457 217 LVHLRSETQFPTLLASL-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAVQVLVLLVS 295 (497)
Q Consensus 217 ll~Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al~~l~~L~~ 295 (497)
+..+|+.+.+...+... ..++. ..+ .+ ..+|.+|...|.+++|+.+|...+.
T Consensus 123 ~~~~~~~~~A~~~~~~~~~~~~~-~~~--~~------------------------~~la~~~~~~~~~~~A~~~~~~~~~ 175 (225)
T 2vq2_A 123 SAKQGQFGLAEAYLKRSLAAQPQ-FPP--AF------------------------KELARTKMLAGQLGDADYYFKKYQS 175 (225)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTT-CHH--HH------------------------HHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCC-Cch--HH------------------------HHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 99999999888887666 44442 234 66 8999999999999999999999888
Q ss_pred CCCCChHHHHHHHHHHHHHhh
Q psy7457 296 SEKYNQPGVWKQLAETYEKSE 316 (497)
Q Consensus 296 ~~~y~~~~vwl~lAeCy~~l~ 316 (497)
...-..+.+|..++.++.+.+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~ 196 (225)
T 2vq2_A 176 RVEVLQADDLLLGWKIAKALG 196 (225)
T ss_dssp HHCSCCHHHHHHHHHHHHHTT
T ss_pred hCCCCCHHHHHHHHHHHHhcC
Confidence 766234555778888877755
No 23
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.27 E-value=9.2e-11 Score=117.21 Aligned_cols=212 Identities=12% Similarity=0.026 Sum_probs=167.4
Q ss_pred cccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHH
Q psy7457 28 QVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDL 107 (497)
Q Consensus 28 ~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~ 107 (497)
+..++++|+-+|.+++. .+|.+...+..++.+|.+.|++. +|++.|+++++. .|.+. .+
T Consensus 155 ~~~~~~~A~~~~~~~~~-------------~~~~~~~~~~~l~~~~~~~g~~~--~A~~~~~~~~~~-~~~~~-----~~ 213 (450)
T 2y4t_A 155 GSGDYTAAIAFLDKILE-------------VCVWDAELRELRAECFIKEGEPR--KAISDLKAASKL-KNDNT-----EA 213 (450)
T ss_dssp HHTCHHHHHHHHHHHHH-------------HCTTCHHHHHHHHHHHHHTTCGG--GGHHHHHHHHHH-HCSCH-----HH
T ss_pred HcCCHHHHHHHHHHHHH-------------hCCCChHHHHHHHHHHHHCCCHH--HHHHHHHHHHHh-CCCCH-----HH
Confidence 34556666666666654 47889999999999999999999 999999999999 88774 68
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCC-hhHH---------HHHHHHHHhhccHHHHHHHHHHhchheeeeccC
Q psy7457 108 STRAAHVYHTARNFPQAASSLAIAFQYSAHLIR-PEHC---------NLYLEVLLELKRYETCVEVLRRFANIEITYFKL 177 (497)
Q Consensus 108 ~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~-~~~v---------NiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~ 177 (497)
...+|.+|...|+.++|+..|+.++...|+... |..+ .-++..+...|+|++|++.+++.....
T Consensus 214 ~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~------ 287 (450)
T 2y4t_A 214 FYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTE------ 287 (450)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC------
Confidence 889999999999999999999999999887532 1111 223899999999999999998876421
Q ss_pred CCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhcc-ccCcccccccchhhhhHHHHHHH
Q psy7457 178 FPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLASL-KFDVEMYGTITVYLDIAEALIQE 256 (497)
Q Consensus 178 ~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~ 256 (497)
|.+.. .-..+...+|.++.++|+.+++...+... ..+| +.++ .+
T Consensus 288 --------------------p~~~~--~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p-~~~~--~~---------- 332 (450)
T 2y4t_A 288 --------------------PSIAE--YTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEP-DNVN--AL---------- 332 (450)
T ss_dssp --------------------CSSHH--HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT-TCHH--HH----------
T ss_pred --------------------CcchH--HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCc-ccHH--HH----------
Confidence 23220 01457888999999999999888887665 4433 2345 77
Q ss_pred HHHHHHHHhhhhhhHHHHHHHHhcccHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHhh
Q psy7457 257 HYEAYAVQFKELVYLDIAEALIQEHYEAYAVQVLVLLVSSEKYNQPGVWKQLAETYEKSE 316 (497)
Q Consensus 257 ~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al~~l~~L~~~~~y~~~~vwl~lAeCy~~l~ 316 (497)
..+|.+|...|++++|+..|...+..... .+.+|..++.+...++
T Consensus 333 --------------~~l~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~~ 377 (450)
T 2y4t_A 333 --------------KDRAEAYLIEEMYDEAIQDYETAQEHNEN-DQQIREGLEKAQRLLK 377 (450)
T ss_dssp --------------HHHHHHHHHTTCHHHHHHHHHHHHTTSSS-CHHHHHHHHHHHHHHH
T ss_pred --------------HHHHHHHHHhcCHHHHHHHHHHHHHhCcc-hHHHHHHHHHHHHHhh
Confidence 99999999999999999999999987554 4556899998877755
No 24
>3uks_A Sedoheptulose-1,7 bisphosphatase, putative; structural genomics, center for structural genomics of infec diseases, csgid; 1.85A {Toxoplasma gondii}
Probab=99.26 E-value=3.4e-12 Score=130.68 Aligned_cols=84 Identities=19% Similarity=0.175 Sum_probs=57.3
Q ss_pred CccchhHHHHHhhhcCCCCccc--cccc--------------ccccccccCcCCcchhhhhhhhhhhHHHHHHhccc--c
Q psy7457 404 SDIRIVRNTLRTFQSKPNNLGL--NVMY--------------ANNCNLTSNVNVQGEEVKKLDVLSNELFVNMLTSS--Y 465 (497)
Q Consensus 404 ~~iTL~rfLl~~~~~~p~~~~~--~LL~--------------~~~~g~aGs~N~~GE~QkkLDV~Anelf~~aL~~s--~ 465 (497)
...||.+||.+.+ .+++ .+|+ .+..|.+|+.|++||.||+||+++|++|+++|+++ +
T Consensus 23 ~~~tL~~~l~~~~-----~~~~l~~ll~~i~~A~k~Is~~v~~a~~g~~g~~N~~Ge~qkkLDv~An~i~~~aL~~s~~g 97 (347)
T 3uks_A 23 ALPSLDQLLKEQG-----ADQTLTDLILAILDRCGKIASALQGTSVDKVGSVNEFGDEQLTVDVIAENLLRSWAQSSEGS 97 (347)
T ss_dssp -CCCHHHHHHHTT-----CCHHHHHHHHHHHHHHHHHHHHHHHCC--------------CCHHHHHHHHHHHHHHSGGGT
T ss_pred ccCcHHHHhhhcC-----CchHHHHHHHHHHHHHHHHHHHHhhhcccccccccCCCCccchHHHHHHHHHHHHHHhcCCC
Confidence 4578999998743 2223 3444 34568899999999999999999999999999999 8
Q ss_pred CeeEEecCCCCceeecCCCCCCCCCeEEEec
Q psy7457 466 STCLLVSEENETALEIHHQEASTGDPCVRLD 496 (497)
Q Consensus 466 ~Va~~aSEE~e~~i~v~~~~~~~G~Y~V~fD 496 (497)
.||+++|||+++++.+++ +|+|+|+||
T Consensus 98 ~v~~iaSEE~~~~~~~~~----~g~y~V~fD 124 (347)
T 3uks_A 98 AVRAVCSEEDIHLQECHK----NGEFILCWD 124 (347)
T ss_dssp TEEEEEESSCCSCEECCT----TCCEEEEEE
T ss_pred CEEEEEecCCCcccccCC----CCCEEEEEe
Confidence 999999999999998875 799999998
No 25
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.24 E-value=2.8e-10 Score=118.24 Aligned_cols=237 Identities=10% Similarity=-0.023 Sum_probs=171.8
Q ss_pred CChHHHHHHHHHHHhhhcccccCCccceehhhcccCc---------------------chhhhHHHhhcCCCCccHHHHH
Q psy7457 9 ENPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTP---------------------KKIEHILIQRGLSKDTILDNRA 67 (497)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~---------------------~~~~~~~~~~~~~~p~n~~~~~ 67 (497)
.|+..|..++...... .++++|+-+|.+++.. .+...++.++...+|++...+.
T Consensus 303 ~~~~~~~~l~~~~~~~-----g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~ 377 (597)
T 2xpi_A 303 KSSDLLLCKADTLFVR-----SRFIDVLAITTKILEIDPYNLDVYPLHLASLHESGEKNKLYLISNDLVDRHPEKAVTWL 377 (597)
T ss_dssp GCHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHCTTCCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSHHHHH
T ss_pred chHHHHHHHHHHHHHh-----cCHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhCcccHHHHH
Confidence 5788888877765543 3445555555555422 1222233444466889999999
Q ss_pred HHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHH
Q psy7457 68 RRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLY 147 (497)
Q Consensus 68 ~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiL 147 (497)
..+.+|.+.|++. +|++.|+++++. .|.+. .....++..|...|+.++|++.|++++...|+. ..-.+.+
T Consensus 378 ~l~~~~~~~g~~~--~A~~~~~~~~~~-~~~~~-----~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~--~~~~~~l 447 (597)
T 2xpi_A 378 AVGIYYLCVNKIS--EARRYFSKSSTM-DPQFG-----PAWIGFAHSFAIEGEHDQAISAYTTAARLFQGT--HLPYLFL 447 (597)
T ss_dssp HHHHHHHHTTCHH--HHHHHHHHHHHH-CTTCH-----HHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTC--SHHHHHH
T ss_pred HHHHHHHHhccHH--HHHHHHHHHHHh-CCCCH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc--hHHHHHH
Confidence 9999999999999 999999999998 88764 577789999999999999999999999988853 4567889
Q ss_pred HHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchh
Q psy7457 148 LEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFP 227 (497)
Q Consensus 148 aEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~ 227 (497)
+.+|...|++++|++.+++..... |.+ ......+|.++.+.|+.+++.
T Consensus 448 ~~~~~~~g~~~~A~~~~~~~~~~~--------------------------~~~------~~~~~~l~~~~~~~g~~~~A~ 495 (597)
T 2xpi_A 448 GMQHMQLGNILLANEYLQSSYALF--------------------------QYD------PLLLNELGVVAFNKSDMQTAI 495 (597)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHC--------------------------CCC------HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhC--------------------------CCC------hHHHHHHHHHHHHhCCHHHHH
Confidence 999999999999999998866421 222 355678888889999988887
Q ss_pred HHhhcc-cc------CcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHHHHHHHHhcCCCCC
Q psy7457 228 TLLASL-KF------DVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAVQVLVLLVSSEKYN 300 (497)
Q Consensus 228 ~l~~~l-~e------~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al~~l~~L~~~~~y~ 300 (497)
.++... .. +|..... .+ ..+|.+|...|++++|+.+|..++.... +
T Consensus 496 ~~~~~~~~~~~~~~~~p~~~~~--~~------------------------~~l~~~~~~~g~~~~A~~~~~~~~~~~p-~ 548 (597)
T 2xpi_A 496 NHFQNALLLVKKTQSNEKPWAA--TW------------------------ANLGHAYRKLKMYDAAIDALNQGLLLST-N 548 (597)
T ss_dssp HHHHHHHHHHHHSCCCSGGGHH--HH------------------------HHHHHHHHHTTCHHHHHHHHHHHHHHSS-C
T ss_pred HHHHHHHHhhhccccchhhHHH--HH------------------------HHHHHHHHHhcCHHHHHHHHHHHHHhCC-C
Confidence 777665 33 3333344 66 6777777777777777777776665543 2
Q ss_pred hHHHHHHHHHHHHHhhhcc
Q psy7457 301 QPGVWKQLAETYEKSECLS 319 (497)
Q Consensus 301 ~~~vwl~lAeCy~~l~~l~ 319 (497)
.+.+|..+|.||.+.+..+
T Consensus 549 ~~~~~~~l~~~~~~~g~~~ 567 (597)
T 2xpi_A 549 DANVHTAIALVYLHKKIPG 567 (597)
T ss_dssp CHHHHHHHHHHHHHTTCHH
T ss_pred ChHHHHHHHHHHHHhCCHH
Confidence 4455777777776655443
No 26
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.24 E-value=3.5e-10 Score=100.31 Aligned_cols=169 Identities=11% Similarity=0.057 Sum_probs=144.5
Q ss_pred ccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCC
Q psy7457 61 TILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIR 140 (497)
Q Consensus 61 ~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~ 140 (497)
++...++..+.+|.+.|++. +|++.|+++++. .|.+. ++...+|.+|...|+.++|+..++.++...|..
T Consensus 3 e~~~iy~~lG~~~~~~g~~~--~A~~~~~~al~~-~p~~~-----~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~-- 72 (184)
T 3vtx_A 3 ETTTIYMDIGDKKRTKGDFD--GAIRAYKKVLKA-DPNNV-----ETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTS-- 72 (184)
T ss_dssp -CHHHHHHHHHHHHHHTCHH--HHHHHHHHHHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCC--
T ss_pred cHHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHh-CCCCH-----HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchh--
Confidence 45788999999999999999 999999999999 99884 788899999999999999999999999999865
Q ss_pred hhHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhc
Q psy7457 141 PEHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHL 220 (497)
Q Consensus 141 ~~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~L 220 (497)
......++..+...++|+.+++.+.+..... |. ..+....+|.++..+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~--------------------------~~------~~~~~~~lg~~~~~~ 120 (184)
T 3vtx_A 73 AEAYYILGSANFMIDEKQAAIDALQRAIALN--------------------------TV------YADAYYKLGLVYDSM 120 (184)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------------------------TT------CHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------------------------cc------chHHHHHHHHHHHHh
Confidence 5667778899999999999999998866421 33 346788999999999
Q ss_pred CCCCchhHHhhcc-ccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHHHHHHHHhcCCC
Q psy7457 221 RSETQFPTLLASL-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAVQVLVLLVSSEK 298 (497)
Q Consensus 221 g~~~~~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al~~l~~L~~~~~ 298 (497)
|+.+++...++.. ..+|. ..+ .+ ..+|.+|...|++++|+.+|...+..+.
T Consensus 121 g~~~~A~~~~~~~l~~~p~-~~~--~~------------------------~~lg~~~~~~g~~~~A~~~~~~al~~~p 172 (184)
T 3vtx_A 121 GEHDKAIEAYEKTISIKPG-FIR--AY------------------------QSIGLAYEGKGLRDEAVKYFKKALEKEE 172 (184)
T ss_dssp TCHHHHHHHHHHHHHHCTT-CHH--HH------------------------HHHHHHHHHTTCHHHHHHHHHHHHHTTH
T ss_pred CCchhHHHHHHHHHHhcch-hhh--HH------------------------HHHHHHHHHCCCHHHHHHHHHHHHhCCc
Confidence 9999988887766 55553 345 67 8999999999999999999998887643
No 27
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.21 E-value=1.7e-09 Score=100.57 Aligned_cols=259 Identities=7% Similarity=-0.001 Sum_probs=185.4
Q ss_pred cHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCC--C
Q psy7457 62 ILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHL--I 139 (497)
Q Consensus 62 n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~--f 139 (497)
|.+.++.+|..+...|++. +|++.|+++++. .|.+. .+...+|.+|...|++++|++.+++++. .|+. +
T Consensus 2 n~~~~~~~a~~~~~~~~~~--~A~~~~~~~l~~-~p~~~-----~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~~~ 72 (272)
T 3u4t_A 2 NDDVEFRYADFLFKNNNYA--EAIEVFNKLEAK-KYNSP-----YIYNRRAVCYYELAKYDLAQKDIETYFS-KVNATKA 72 (272)
T ss_dssp ---CHHHHHHHHHTTTCHH--HHHHHHHHHHHT-TCCCS-----TTHHHHHHHHHHTTCHHHHHHHHHHHHT-TSCTTTC
T ss_pred cHHHHHHHHHHHHHhcCHH--HHHHHHHHHHHh-CCCcH-----HHHHHHHHHHHHHhhHHHHHHHHHHHHh-ccCchhH
Confidence 3567899999999999999 999999999999 99876 4777899999999999999999999999 5432 2
Q ss_pred ChhHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhh
Q psy7457 140 RPEHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVH 219 (497)
Q Consensus 140 ~~~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~ 219 (497)
.......++.+|...|+|++|++.+++..... |.. .+....+|.++..
T Consensus 73 ~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~--------------------------~~~------~~~~~~l~~~~~~ 120 (272)
T 3u4t_A 73 KSADFEYYGKILMKKGQDSLAIQQYQAAVDRD--------------------------TTR------LDMYGQIGSYFYN 120 (272)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--------------------------TTC------THHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHhcC--------------------------ccc------HHHHHHHHHHHHH
Confidence 23447899999999999999999998876421 332 3678899999999
Q ss_pred cCCCCchhHHhhcc-ccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHH-HHHHhcccHHHHHHHHHHHhcCC
Q psy7457 220 LRSETQFPTLLASL-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIA-EALIQEHYEAYAVQVLVLLVSSE 297 (497)
Q Consensus 220 Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldva-eAl~e~g~y~~Al~~l~~L~~~~ 297 (497)
+|+.+.+...+... ..++ .... .+ ..+| .+|. .+.|++|+..|...+...
T Consensus 121 ~~~~~~A~~~~~~al~~~~-~~~~--~~------------------------~~l~~~~~~-~~~~~~A~~~~~~a~~~~ 172 (272)
T 3u4t_A 121 KGNFPLAIQYMEKQIRPTT-TDPK--VF------------------------YELGQAYYY-NKEYVKADSSFVKVLELK 172 (272)
T ss_dssp TTCHHHHHHHHGGGCCSSC-CCHH--HH------------------------HHHHHHHHH-TTCHHHHHHHHHHHHHHS
T ss_pred ccCHHHHHHHHHHHhhcCC-CcHH--HH------------------------HHHHHHHHH-HHHHHHHHHHHHHHHHhC
Confidence 99999988888766 4443 2334 66 8889 5555 459999999999998876
Q ss_pred CCChHHHHHHHHHHHHHhhhccCcccccccCCCchHHHHHHHhhhhhcccccccHHHHhhccccccccccccCCcchhHH
Q psy7457 298 KYNQPGVWKQLAETYEKSECLSGVVVSTVDTGSGSWWFQSMSSAMCSTVLIKDSTEHLDQLSLDATTVLYKTGHIPHAYQ 377 (497)
Q Consensus 298 ~y~~~~vwl~lAeCy~~l~~l~~~~~~~~d~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~ay~ 377 (497)
..+ +..|..+|.|+..++.-.+.. .+ ...+...++..-..+...+....+. +..+ .......|++..|..
T Consensus 173 p~~-~~~~~~~~~~~~~~~~~~~~~-----~A-~~~~~~a~~~~~~~~~~~~~~~~~~-~~~l--~~~~~~~~~~~~A~~ 242 (272)
T 3u4t_A 173 PNI-YIGYLWRARANAAQDPDTKQG-----LA-KPYYEKLIEVCAPGGAKYKDELIEA-NEYI--AYYYTINRDKVKADA 242 (272)
T ss_dssp TTC-HHHHHHHHHHHHHHSTTCSSC-----TT-HHHHHHHHHHHGGGGGGGHHHHHHH-HHHH--HHHHHHTTCHHHHHH
T ss_pred ccc-hHHHHHHHHHHHHcCcchhhH-----HH-HHHHHHHHHHHhcccccchHHHHHH-HHHH--HHHHHHcCCHHHHHH
Confidence 655 556999999999887421111 01 1113333332111111100000111 1112 124455799999999
Q ss_pred HHHHHHHhcCCCccchhhhhcc
Q psy7457 378 LFRVLMLKNLDSKVVLNLMNLI 399 (497)
Q Consensus 378 ~~r~~~~~~~~~~~~wnlfn~~ 399 (497)
+++..+..+++++.+|.....+
T Consensus 243 ~~~~al~~~p~~~~a~~~l~~~ 264 (272)
T 3u4t_A 243 AWKNILALDPTNKKAIDGLKMK 264 (272)
T ss_dssp HHHHHHHHCTTCHHHHHHHC--
T ss_pred HHHHHHhcCccHHHHHHHhhhh
Confidence 9999999999999888877553
No 28
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.21 E-value=1.2e-10 Score=108.46 Aligned_cols=225 Identities=8% Similarity=0.028 Sum_probs=168.5
Q ss_pred ChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHH
Q psy7457 10 NPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQ 89 (497)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~ 89 (497)
||+.++..+...+.+ .+.++|+-+|.+++. .+|++...+..++.+|.+.|++. +|++.|+
T Consensus 2 n~~~~~~~a~~~~~~-----~~~~~A~~~~~~~l~-------------~~p~~~~~~~~l~~~~~~~~~~~--~A~~~~~ 61 (272)
T 3u4t_A 2 NDDVEFRYADFLFKN-----NNYAEAIEVFNKLEA-------------KKYNSPYIYNRRAVCYYELAKYD--LAQKDIE 61 (272)
T ss_dssp ---CHHHHHHHHHTT-----TCHHHHHHHHHHHHH-------------TTCCCSTTHHHHHHHHHHTTCHH--HHHHHHH
T ss_pred cHHHHHHHHHHHHHh-----cCHHHHHHHHHHHHH-------------hCCCcHHHHHHHHHHHHHHhhHH--HHHHHHH
Confidence 677777777766543 456677777777665 48889999999999999999999 9999999
Q ss_pred HHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 90 RYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 90 ~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
++++. |.+. .........+|.+|...|+.++|+..|+++++..|.. ..-...++.+|...|+|++|++.+++...
T Consensus 62 ~a~~~--~~~~-~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~--~~~~~~l~~~~~~~~~~~~A~~~~~~al~ 136 (272)
T 3u4t_A 62 TYFSK--VNAT-KAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTR--LDMYGQIGSYFYNKGNFPLAIQYMEKQIR 136 (272)
T ss_dssp HHHTT--SCTT-TCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC--THHHHHHHHHHHHTTCHHHHHHHHGGGCC
T ss_pred HHHhc--cCch-hHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCccc--HHHHHHHHHHHHHccCHHHHHHHHHHHhh
Confidence 99996 5443 3334557899999999999999999999999999975 46788999999999999999999987664
Q ss_pred heeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHH-HHHhhcCCCCchhHHhhcc-ccCcccccccchhh
Q psy7457 170 IEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFV-ITLVHLRSETQFPTLLASL-KFDVEMYGTITVYL 247 (497)
Q Consensus 170 ~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLg-I~ll~Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly~ 247 (497)
. .|. .......+| .+... ++.+.+...+... ..+|.. .+ .+
T Consensus 137 ~--------------------------~~~------~~~~~~~l~~~~~~~-~~~~~A~~~~~~a~~~~p~~-~~--~~- 179 (272)
T 3u4t_A 137 P--------------------------TTT------DPKVFYELGQAYYYN-KEYVKADSSFVKVLELKPNI-YI--GY- 179 (272)
T ss_dssp S--------------------------SCC------CHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHSTTC-HH--HH-
T ss_pred c--------------------------CCC------cHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCccc-hH--HH-
Confidence 2 023 346677888 55554 4555566666555 444432 33 55
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhccc---HHHHHHHHHHHhcCCCCC-------hHHHHHHHHHHHHHhhh
Q psy7457 248 DIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHY---EAYAVQVLVLLVSSEKYN-------QPGVWKQLAETYEKSEC 317 (497)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~---y~~Al~~l~~L~~~~~y~-------~~~vwl~lAeCy~~l~~ 317 (497)
+..|.++...|. +.+|+..|...+....-. ...+|..+|.||.+.+.
T Consensus 180 -----------------------~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 236 (272)
T 3u4t_A 180 -----------------------LWRARANAAQDPDTKQGLAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYTINRD 236 (272)
T ss_dssp -----------------------HHHHHHHHHHSTTCSSCTTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHHHHTTC
T ss_pred -----------------------HHHHHHHHHcCcchhhHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHcCC
Confidence 788999999998 888888888777653211 33689999999988664
Q ss_pred cc
Q psy7457 318 LS 319 (497)
Q Consensus 318 l~ 319 (497)
.+
T Consensus 237 ~~ 238 (272)
T 3u4t_A 237 KV 238 (272)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 29
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.19 E-value=6.7e-10 Score=102.37 Aligned_cols=203 Identities=12% Similarity=-0.005 Sum_probs=164.5
Q ss_pred hHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHH
Q psy7457 11 PQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQR 90 (497)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~ 90 (497)
|+.|+.+++..+. ..++++|+-+|.+++.. +|.+...+...+.+|.+.|++. +|++.|++
T Consensus 37 ~~~~~~~a~~~~~-----~~~~~~A~~~~~~al~~-------------~~~~~~~~~~la~~~~~~~~~~--~A~~~~~~ 96 (252)
T 2ho1_A 37 RDAYIQLGLGYLQ-----RGNTEQAKVPLRKALEI-------------DPSSADAHAALAVVFQTEMEPK--LADEEYRK 96 (252)
T ss_dssp HHHHHHHHHHHHH-----TTCTGGGHHHHHHHHHH-------------CTTCHHHHHHHHHHHHHTTCHH--HHHHHHHH
T ss_pred HHHHHHHHHHHHH-----cCChHHHHHHHHHHHhc-------------CCChHHHHHHHHHHHHHcCCHH--HHHHHHHH
Confidence 5556666665553 45678888888887763 6888999999999999999999 99999999
Q ss_pred HHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH--HccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhc
Q psy7457 91 YLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQ--YSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFA 168 (497)
Q Consensus 91 il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~--~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~ 168 (497)
+++. .|.+. .+...+|.+|...|+.++|++.+++++. ..|. ...-...++.++...|++++|++.+++..
T Consensus 97 a~~~-~~~~~-----~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~--~~~~~~~la~~~~~~g~~~~A~~~~~~~~ 168 (252)
T 2ho1_A 97 ALAS-DSRNA-----RVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPE--RSRVFENLGLVSLQMKKPAQAKEYFEKSL 168 (252)
T ss_dssp HHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTT--HHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHH-CcCcH-----HHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcc--cHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 9999 88774 6788999999999999999999999998 3332 34557788999999999999999998865
Q ss_pred hheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhcc-ccCcccccccchhh
Q psy7457 169 NIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLASL-KFDVEMYGTITVYL 247 (497)
Q Consensus 169 ~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly~ 247 (497)
... |. .......+|.++..+|+.+.+...+... ..++ +..+ .+
T Consensus 169 ~~~--------------------------~~------~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~-~~~~--~~- 212 (252)
T 2ho1_A 169 RLN--------------------------RN------QPSVALEMADLLYKEREYVPARQYYDLFAQGGG-QNAR--SL- 212 (252)
T ss_dssp HHC--------------------------SC------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSC-CCHH--HH-
T ss_pred hcC--------------------------cc------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc-CcHH--HH-
Confidence 421 22 3467789999999999999888887666 4443 3344 66
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHHHHHHHHhcCCCCC
Q psy7457 248 DIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAVQVLVLLVSSEKYN 300 (497)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al~~l~~L~~~~~y~ 300 (497)
...+.++...|.+++|+.+|..+.....-+
T Consensus 213 -----------------------~~~~~~~~~~g~~~~A~~~~~~~~~~~p~~ 242 (252)
T 2ho1_A 213 -----------------------LLGIRLAKVFEDRDTAASYGLQLKRLYPGS 242 (252)
T ss_dssp -----------------------HHHHHHHHHTTCHHHHHHHHHHHHHHCTTS
T ss_pred -----------------------HHHHHHHHHccCHHHHHHHHHHHHHHCCCC
Confidence 889999999999999999999998765544
No 30
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.19 E-value=1.5e-10 Score=121.08 Aligned_cols=199 Identities=12% Similarity=-0.018 Sum_probs=168.6
Q ss_pred HHHhhcCCCCccHHHHHHHHHHHHHhCCc-chhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHH
Q psy7457 51 ILIQRGLSKDTILDNRARRLRLCDEIGLK-NRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLA 129 (497)
Q Consensus 51 ~~~~~~~~~p~n~~~~~~RA~Ly~elG~~-~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le 129 (497)
.+.++...+|.+...++.++.+|...|++ . +|++.|++.++. .|.+. ++...+|.+|...|++++|++.|+
T Consensus 90 ~l~~~~~~~~~~a~~~~~lg~~~~~~g~~~~--~A~~~~~~al~~-~p~~~-----~a~~~lg~~~~~~g~~~~A~~~~~ 161 (474)
T 4abn_A 90 QMEEVLGSAQVEAQALMLKGKALNVTPDYSP--EAEVLLSKAVKL-EPELV-----EAWNQLGEVYWKKGDVTSAHTCFS 161 (474)
T ss_dssp HHHHHHTTCCCCHHHHHHHHHHHTSSSSCCH--HHHHHHHHHHHH-CTTCH-----HHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHhccCchhHHHHHHHHHHHHhccccHH--HHHHHHHHHHhh-CCCCH-----HHHHHHHHHHHHcCCHHHHHHHHH
Confidence 34566778999999999999999999999 9 999999999999 88874 688899999999999999999999
Q ss_pred HHHHHccCCCChhHHHHHHHHHHhh---------ccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCC
Q psy7457 130 IAFQYSAHLIRPEHCNLYLEVLLEL---------KRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSD 200 (497)
Q Consensus 130 ~a~~~~~~~f~~~~vNiLaEL~i~~---------k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~ 200 (497)
+++...|+ ..-.+.++.+|..+ |+|++|++.+++..... |++
T Consensus 162 ~al~~~p~---~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~--------------------------p~~ 212 (474)
T 4abn_A 162 GALTHCKN---KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMD--------------------------VLD 212 (474)
T ss_dssp HHHTTCCC---HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHC--------------------------TTC
T ss_pred HHHhhCCC---HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhC--------------------------CCC
Confidence 99999998 37788999999999 99999999998876421 342
Q ss_pred CCCCCCcchhHHHHHHHhhc--------CCCCchhHHhhcc-ccCcc--cccccchhhhhHHHHHHHHHHHHHHHhhhhh
Q psy7457 201 PNLVPPPEILSKFVITLVHL--------RSETQFPTLLASL-KFDVE--MYGTITVYLDIAEALIQEHYEAYAVQFKELV 269 (497)
Q Consensus 201 l~l~lPiDLr~KLgI~ll~L--------g~~~~~~~l~~~l-~e~~e--e~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~ 269 (497)
.+....+|.++..+ |+.+++...+... ..+|. +.++ .+
T Consensus 213 ------~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~--~~----------------------- 261 (474)
T 4abn_A 213 ------GRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPD--LH----------------------- 261 (474)
T ss_dssp ------HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHH--HH-----------------------
T ss_pred ------HHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCcccCHH--HH-----------------------
Confidence 36778899999998 7777777777666 55554 4445 77
Q ss_pred hHHHHHHHHhcccHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHhhhcc
Q psy7457 270 YLDIAEALIQEHYEAYAVQVLVLLVSSEKYNQPGVWKQLAETYEKSECLS 319 (497)
Q Consensus 270 ~ldvaeAl~e~g~y~~Al~~l~~L~~~~~y~~~~vwl~lAeCy~~l~~l~ 319 (497)
+.+|.+|...|+|++|+..|...+.....+ +..|..+|.++..++..+
T Consensus 262 -~~lg~~~~~~g~~~~A~~~~~~al~l~p~~-~~a~~~l~~~~~~lg~~~ 309 (474)
T 4abn_A 262 -LNRATLHKYEESYGEALEGFSQAAALDPAW-PEPQQREQQLLEFLSRLT 309 (474)
T ss_dssp -HHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998876654 455999999999987443
No 31
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.19 E-value=2.7e-10 Score=116.20 Aligned_cols=100 Identities=14% Similarity=0.012 Sum_probs=79.5
Q ss_pred hHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHH
Q psy7457 11 PQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQR 90 (497)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~ 90 (497)
++.|+..++..+. ..+.++|+-+|.+++.. +|++...+..++.+|.++|++. +|++.|++
T Consensus 25 a~~~~~~g~~~~~-----~g~~~~A~~~~~~al~~-------------~p~~~~~~~~la~~~~~~g~~~--~A~~~~~~ 84 (537)
T 3fp2_A 25 AVQLKNRGNHFFT-----AKNFNEAIKYYQYAIEL-------------DPNEPVFYSNISACYISTGDLE--KVIEFTTK 84 (537)
T ss_dssp HHHHHHHHHHHHH-----TTCCC-CHHHHHHHHHH-------------CTTCHHHHHHHHHHHHHHTCHH--HHHHHHHH
T ss_pred HHHHHHHHHHHHH-----hccHHHHHHHHHHHHhh-------------CCCCcHHHHHHHHHHHHcCCHH--HHHHHHHH
Confidence 4555555555443 45778888888888874 7889999999999999999999 99999999
Q ss_pred HHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccC
Q psy7457 91 YLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAH 137 (497)
Q Consensus 91 il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~ 137 (497)
+++. .|.+. .+...+|.+|...|+.++|+..|+ ++...|+
T Consensus 85 al~~-~p~~~-----~~~~~la~~~~~~g~~~~A~~~~~-~~~~~~~ 124 (537)
T 3fp2_A 85 ALEI-KPDHS-----KALLRRASANESLGNFTDAMFDLS-VLSLNGD 124 (537)
T ss_dssp HHHH-CTTCH-----HHHHHHHHHHHHHTCHHHHHHHHH-HHC----
T ss_pred HHhc-CCchH-----HHHHHHHHHHHHcCCHHHHHHHHH-HHhcCCC
Confidence 9999 88774 678899999999999999999995 6655554
No 32
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.18 E-value=3.7e-10 Score=115.18 Aligned_cols=212 Identities=10% Similarity=0.018 Sum_probs=161.6
Q ss_pred ccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHH
Q psy7457 29 VINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLS 108 (497)
Q Consensus 29 ~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~ 108 (497)
..++++|+-+|.+++. .+|+ ...+...+.+|.+.|++. +|++.|+++++. .|.+. .+.
T Consensus 256 ~~~~~~A~~~~~~~~~-------------~~~~-~~~~~~l~~~~~~~~~~~--~A~~~~~~~~~~-~~~~~-----~~~ 313 (537)
T 3fp2_A 256 KNNLLDAQVLLQESIN-------------LHPT-PNSYIFLALTLADKENSQ--EFFKFFQKAVDL-NPEYP-----PTY 313 (537)
T ss_dssp TTCHHHHHHHHHHHHH-------------HCCC-HHHHHHHHHHTCCSSCCH--HHHHHHHHHHHH-CTTCH-----HHH
T ss_pred cccHHHHHHHHHHHHh-------------cCCC-chHHHHHHHHHHHhcCHH--HHHHHHHHHhcc-CCCCH-----HHH
Confidence 4455555555555554 4777 899999999999999999 999999999999 88774 678
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccc
Q psy7457 109 TRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEES 188 (497)
Q Consensus 109 k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~ 188 (497)
..+|.+|...|+.++|++.+++++...|.. ..-...++.++...|+|++|++.+++.....
T Consensus 314 ~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~--~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~----------------- 374 (537)
T 3fp2_A 314 YHRGQMYFILQDYKNAKEDFQKAQSLNPEN--VYPYIQLACLLYKQGKFTESEAFFNETKLKF----------------- 374 (537)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--SHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----------------
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----------------
Confidence 899999999999999999999999999875 3567889999999999999999998866421
Q ss_pred cccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhcc-ccCcccccccchhhhhHHHHHHHHHHHHHHHhhh
Q psy7457 189 NIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLASL-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKE 267 (497)
Q Consensus 189 ~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~ 267 (497)
|.+ .++...+|.++..+|+.+.+...+... ..++.. .+ .++..
T Consensus 375 ---------~~~------~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~-~~--~~~~~------------------ 418 (537)
T 3fp2_A 375 ---------PTL------PEVPTFFAEILTDRGDFDTAIKQYDIAKRLEEVQ-EK--IHVGI------------------ 418 (537)
T ss_dssp ---------TTC------THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC-SS--CSSTT------------------
T ss_pred ---------CCC------hHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCcc-hh--hHHHH------------------
Confidence 333 367888999999999999888777665 333322 22 11000
Q ss_pred hhhHHHHHHHHhc----------ccHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHhhhc
Q psy7457 268 LVYLDIAEALIQE----------HYEAYAVQVLVLLVSSEKYNQPGVWKQLAETYEKSECL 318 (497)
Q Consensus 268 ~~~ldvaeAl~e~----------g~y~~Al~~l~~L~~~~~y~~~~vwl~lAeCy~~l~~l 318 (497)
..++..|.+|... |.+.+|+.+|...+..... .+.+|..+|.||.+.+..
T Consensus 419 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~-~~~~~~~l~~~~~~~g~~ 478 (537)
T 3fp2_A 419 GPLIGKATILARQSSQDPTQLDEEKFNAAIKLLTKACELDPR-SEQAKIGLAQLKLQMEKI 478 (537)
T ss_dssp HHHHHHHHHHHHHHTC----CCHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHhhccchhhhHhHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhccH
Confidence 0115556777777 8888888888888776543 445688888888876643
No 33
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.18 E-value=2.1e-10 Score=115.74 Aligned_cols=209 Identities=10% Similarity=0.029 Sum_probs=161.1
Q ss_pred cCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHH
Q psy7457 30 INPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLST 109 (497)
Q Consensus 30 ~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k 109 (497)
.++++|+-+|.+++. .+|+ ...+..++.+|...|++. +|++.|+++++. .|.+. .+..
T Consensus 251 ~~~~~A~~~~~~~l~-------------~~~~-~~~~~~l~~~~~~~~~~~--~A~~~~~~~~~~-~~~~~-----~~~~ 308 (514)
T 2gw1_A 251 NDPLGAHEDIKKAIE-------------LFPR-VNSYIYMALIMADRNDST--EYYNYFDKALKL-DSNNS-----SVYY 308 (514)
T ss_dssp SCHHHHHHHHHHHHH-------------HCCC-HHHHHHHHHHHHTSSCCT--TGGGHHHHHHTT-CTTCT-----HHHH
T ss_pred CCHHHHHHHHHHHHh-------------hCcc-HHHHHHHHHHHHHCCCHH--HHHHHHHHHhhc-CcCCH-----HHHH
Confidence 445555555555544 4677 889999999999999999 999999999999 88775 5778
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCcccc
Q psy7457 110 RAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESN 189 (497)
Q Consensus 110 ~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~ 189 (497)
.+|.+|...|+.++|+..|+.++...|.. ..-...++.++...|+|++|++.+++.....
T Consensus 309 ~l~~~~~~~~~~~~A~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~------------------ 368 (514)
T 2gw1_A 309 HRGQMNFILQNYDQAGKDFDKAKELDPEN--IFPYIQLACLAYRENKFDDCETLFSEAKRKF------------------ 368 (514)
T ss_dssp HHHHHHHHTTCTTHHHHHHHHHHHTCSSC--SHHHHHHHHHTTTTTCHHHHHHHHHHHHHHS------------------
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHhChhh--HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHc------------------
Confidence 89999999999999999999999988864 4567788899999999999999998865421
Q ss_pred ccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhcc-ccCcccc---cccchhhhhHHHHHHHHHHHHHHHh
Q psy7457 190 IQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLASL-KFDVEMY---GTITVYLDIAEALIQEHYEAYAVQF 265 (497)
Q Consensus 190 ~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l-~e~~ee~---~D~~Ly~~~~~~~~~~~~~~~~~~~ 265 (497)
|.+ .+....+|.++..+|+.+.+...+... ..++... ..+..+
T Consensus 369 --------~~~------~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~------------------- 415 (514)
T 2gw1_A 369 --------PEA------PEVPNFFAEILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPL------------------- 415 (514)
T ss_dssp --------TTC------SHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHH-------------------
T ss_pred --------ccC------HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHH-------------------
Confidence 332 357788899999999988877776655 3333221 111245
Q ss_pred hhhhhHHHHHHHHh---cccHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHhhhcc
Q psy7457 266 KELVYLDIAEALIQ---EHYEAYAVQVLVLLVSSEKYNQPGVWKQLAETYEKSECLS 319 (497)
Q Consensus 266 ~~~~~ldvaeAl~e---~g~y~~Al~~l~~L~~~~~y~~~~vwl~lAeCy~~l~~l~ 319 (497)
..+|.+|.. .|.+++|+.+|...+..... .+..|..+|.||.+.+..+
T Consensus 416 -----~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~g~~~ 466 (514)
T 2gw1_A 416 -----VGKATLLTRNPTVENFIEATNLLEKASKLDPR-SEQAKIGLAQMKLQQEDID 466 (514)
T ss_dssp -----HHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHH
T ss_pred -----HHHHHHHhhhhhcCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHhcCHH
Confidence 889999999 99999999999988876543 4566899999998876444
No 34
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.17 E-value=6.4e-10 Score=103.06 Aligned_cols=189 Identities=10% Similarity=-0.024 Sum_probs=111.8
Q ss_pred hcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q psy7457 55 RGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQY 134 (497)
Q Consensus 55 ~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~ 134 (497)
+...+|++...+...+.+|.+.|++. +|++.|+++++. .|.+. .+...+|.+|...|++++|+..+++++..
T Consensus 69 al~~~~~~~~~~~~la~~~~~~~~~~--~A~~~~~~al~~-~~~~~-----~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 140 (275)
T 1xnf_A 69 ALAIRPDMPEVFNYLGIYLTQAGNFD--AAYEAFDSVLEL-DPTYN-----YAHLNRGIALYYGGRDKLAQDDLLAFYQD 140 (275)
T ss_dssp HHHHCCCCHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-CTTCT-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHcCCCcHHHHHHHHHHHHHccCHH--HHHHHHHHHHhc-Ccccc-----HHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 33346666777777777777777777 777777777776 66654 45666777777777777777777777776
Q ss_pred ccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHH
Q psy7457 135 SAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFV 214 (497)
Q Consensus 135 ~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLg 214 (497)
.|+.. ...++..+....|++++|+..+.+..... |.+. . . ..+
T Consensus 141 ~~~~~---~~~~~~~~~~~~~~~~~A~~~~~~~~~~~--------------------------~~~~-----~-~-~~~- 183 (275)
T 1xnf_A 141 DPNDP---FRSLWLYLAEQKLDEKQAKEVLKQHFEKS--------------------------DKEQ-----W-G-WNI- 183 (275)
T ss_dssp CTTCH---HHHHHHHHHHHHHCHHHHHHHHHHHHHHS--------------------------CCCS-----T-H-HHH-
T ss_pred CCCCh---HHHHHHHHHHHhcCHHHHHHHHHHHHhcC--------------------------Ccch-----H-H-HHH-
Confidence 66542 33444445566677777777665544210 2221 1 1 123
Q ss_pred HHHhhcCCCCc--hhHHhhcc-ccCccc---ccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHHH
Q psy7457 215 ITLVHLRSETQ--FPTLLASL-KFDVEM---YGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAVQ 288 (497)
Q Consensus 215 I~ll~Lg~~~~--~~~l~~~l-~e~~ee---~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al~ 288 (497)
+.+.++.... +...+... ..++.. ..+ .+ +.+|.+|...|++++|+.
T Consensus 184 -~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~--~~------------------------~~la~~~~~~g~~~~A~~ 236 (275)
T 1xnf_A 184 -VEFYLGNISEQTLMERLKADATDNTSLAEHLSE--TN------------------------FYLGKYYLSLGDLDSATA 236 (275)
T ss_dssp -HHHHTTSSCHHHHHHHHHHHCCSHHHHHHHHHH--HH------------------------HHHHHHHHHTTCHHHHHH
T ss_pred -HHHHHHhcCHHHHHHHHHHHhcccccccccccH--HH------------------------HHHHHHHHHcCCHHHHHH
Confidence 3333443333 22223222 222211 123 44 999999999999999999
Q ss_pred HHHHHhcCCCCChHHHHHHHHHHHHHhhhcc
Q psy7457 289 VLVLLVSSEKYNQPGVWKQLAETYEKSECLS 319 (497)
Q Consensus 289 ~l~~L~~~~~y~~~~vwl~lAeCy~~l~~l~ 319 (497)
+|...+.....+ |..++.|+.+++.++
T Consensus 237 ~~~~al~~~p~~----~~~~~~~~~~l~~~~ 263 (275)
T 1xnf_A 237 LFKLAVANNVHN----FVEHRYALLELSLLG 263 (275)
T ss_dssp HHHHHHTTCCTT----CHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCchh----HHHHHHHHHHHHHHH
Confidence 999999876544 333355665555443
No 35
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.17 E-value=4.4e-10 Score=103.31 Aligned_cols=210 Identities=10% Similarity=-0.026 Sum_probs=145.3
Q ss_pred CccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCC-CCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCC
Q psy7457 60 DTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITP-DSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHL 138 (497)
Q Consensus 60 p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P-~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~ 138 (497)
|.|.+.++.++..|.+.|++. +|++.|+++++. .| .+. .+...+|.+|...|++++|+..+++++...|..
T Consensus 4 ~~~~~~~~~~g~~~~~~~~~~--~A~~~~~~al~~-~~~~~~-----~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~ 75 (228)
T 4i17_A 4 TTDPNQLKNEGNDALNAKNYA--VAFEKYSEYLKL-TNNQDS-----VTAYNCGVCADNIKKYKEAADYFDIAIKKNYNL 75 (228)
T ss_dssp CCCHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-TTTCCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSH
T ss_pred ccCHHHHHHHHHHHHHccCHH--HHHHHHHHHHhc-cCCCCc-----HHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcch
Confidence 445689999999999999999 999999999999 88 553 466679999999999999999999999999873
Q ss_pred CChhHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCc-----chhHHH
Q psy7457 139 IRPEHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPP-----EILSKF 213 (497)
Q Consensus 139 f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPi-----DLr~KL 213 (497)
..-...++.+|..+|+|++|++.+++..... |++. .+ +....+
T Consensus 76 --~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~--------------------------p~~~----~~~~~~~~~~~~~ 123 (228)
T 4i17_A 76 --ANAYIGKSAAYRDMKNNQEYIATLTEGIKAV--------------------------PGNA----TIEKLYAIYYLKE 123 (228)
T ss_dssp --HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--------------------------TTCH----HHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHcccHHHHHHHHHHHHHHC--------------------------CCcH----HHHHHHHHHHHHH
Confidence 5568889999999999999999998876421 3332 22 668899
Q ss_pred HHHHhhcCCCCchhHHhhcc-ccCccc-ccccchhhhhHHHHHHHH--HHHHHHHhhh-hhhHHHHHHHHhcccHHHHHH
Q psy7457 214 VITLVHLRSETQFPTLLASL-KFDVEM-YGTITVYLDIAEALIQEH--YEAYAVQFKE-LVYLDIAEALIQEHYEAYAVQ 288 (497)
Q Consensus 214 gI~ll~Lg~~~~~~~l~~~l-~e~~ee-~~D~~Ly~~~~~~~~~~~--~~~~~~~~~~-~~~ldvaeAl~e~g~y~~Al~ 288 (497)
|.+...+|+.+.+...+... ..+|.+ ..+ .++..+....... +-..+..... ....-.+......|.|++|+.
T Consensus 124 g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~--~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~ 201 (228)
T 4i17_A 124 GQKFQQAGNIEKAEENYKHATDVTSKKWKTD--ALYSLGVLFYNNGADVLRKATPLASSNKEKYASEKAKADAAFKKAVD 201 (228)
T ss_dssp HHHHHHTTCHHHHHHHHHHHTTSSCHHHHHH--HHHHHHHHHHHHHHHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHhccHHHHHHHHHHHHhcCCCcccHH--HHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988888776 555542 234 4511111111111 0000000000 000001222333455599999
Q ss_pred HHHHHhcCCCCChHHHHHHHHHHH
Q psy7457 289 VLVLLVSSEKYNQPGVWKQLAETY 312 (497)
Q Consensus 289 ~l~~L~~~~~y~~~~vwl~lAeCy 312 (497)
+|...+....-+. .++..++...
T Consensus 202 ~~~~a~~l~p~~~-~~~~~l~~i~ 224 (228)
T 4i17_A 202 YLGEAVTLSPNRT-EIKQMQDQVK 224 (228)
T ss_dssp HHHHHHHHCTTCH-HHHHHHHHHH
T ss_pred HHHHHhhcCCCCH-HHHHHHHHHH
Confidence 9999888766543 3355555543
No 36
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.16 E-value=2.9e-10 Score=103.44 Aligned_cols=188 Identities=9% Similarity=0.061 Sum_probs=140.0
Q ss_pred cHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCCh
Q psy7457 62 ILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRP 141 (497)
Q Consensus 62 n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~ 141 (497)
....+..++..+.+.|++. +|++.|+++++. .|.+. .+...+|.+|...|+.++|++.+++++...|.. .
T Consensus 22 ~~~~~~~~a~~~~~~~~~~--~A~~~~~~~l~~-~~~~~-----~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~--~ 91 (243)
T 2q7f_A 22 ASMTGGQQMGRGSEFGDYE--KAAEAFTKAIEE-NKEDA-----IPYINFANLLSSVNELERALAFYDKALELDSSA--A 91 (243)
T ss_dssp ----------------------CCTTHHHHHTT-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--H
T ss_pred HHHHHHHHHHHHHHhhCHH--HHHHHHHHHHHh-CcccH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcc--h
Confidence 3567788999999999999 999999999999 88774 688899999999999999999999999998863 5
Q ss_pred hHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcC
Q psy7457 142 EHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLR 221 (497)
Q Consensus 142 ~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg 221 (497)
.-...++.++...|+|++|++.+++..... |. ..++...+|.+++.+|
T Consensus 92 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~--------------------------~~------~~~~~~~~a~~~~~~~ 139 (243)
T 2q7f_A 92 TAYYGAGNVYVVKEMYKEAKDMFEKALRAG--------------------------ME------NGDLFYMLGTVLVKLE 139 (243)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHT--------------------------CC------SHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhC--------------------------CC------CHHHHHHHHHHHHHhc
Confidence 668889999999999999999998876421 22 3457788999999999
Q ss_pred CCCchhHHhhcc-ccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHHHHHHHHhcCCCCC
Q psy7457 222 SETQFPTLLASL-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAVQVLVLLVSSEKYN 300 (497)
Q Consensus 222 ~~~~~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al~~l~~L~~~~~y~ 300 (497)
+.+.+...+... ..++ +... .+ ..+|.+|...|.+++|+.+|...+.....
T Consensus 140 ~~~~A~~~~~~~~~~~~-~~~~--~~------------------------~~l~~~~~~~~~~~~A~~~~~~~~~~~~~- 191 (243)
T 2q7f_A 140 QPKLALPYLQRAVELNE-NDTE--AR------------------------FQFGMCLANEGMLDEALSQFAAVTEQDPG- 191 (243)
T ss_dssp CHHHHHHHHHHHHHHCT-TCHH--HH------------------------HHHHHHHHHHTCCHHHHHHHHHHHHHCTT-
T ss_pred cHHHHHHHHHHHHHhCC-ccHH--HH------------------------HHHHHHHHHcCCHHHHHHHHHHHHHhCcc-
Confidence 999888887666 4433 2234 66 89999999999999999999998877553
Q ss_pred hHHHHHHHHHHHHHhhhcc
Q psy7457 301 QPGVWKQLAETYEKSECLS 319 (497)
Q Consensus 301 ~~~vwl~lAeCy~~l~~l~ 319 (497)
.+.+|..+|.||.+.+..+
T Consensus 192 ~~~~~~~la~~~~~~~~~~ 210 (243)
T 2q7f_A 192 HADAFYNAGVTYAYKENRE 210 (243)
T ss_dssp CHHHHHHHHHHHHHTTCTT
T ss_pred cHHHHHHHHHHHHHccCHH
Confidence 4667999999999877544
No 37
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.14 E-value=8e-10 Score=98.74 Aligned_cols=206 Identities=8% Similarity=-0.051 Sum_probs=164.9
Q ss_pred CChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHH
Q psy7457 9 ENPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGY 88 (497)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y 88 (497)
.+|..|+.++...+.. .++++|+-+|.+++.. +|++...+...+.+|...|++. +|++.|
T Consensus 6 ~~~~~~~~~~~~~~~~-----~~~~~A~~~~~~~~~~-------------~~~~~~~~~~l~~~~~~~~~~~--~A~~~~ 65 (225)
T 2vq2_A 6 QVSNIKTQLAMEYMRG-----QDYRQATASIEDALKS-------------DPKNELAWLVRAEIYQYLKVND--KAQESF 65 (225)
T ss_dssp HHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHH-------------CTTCHHHHHHHHHHHHHTTCHH--HHHHHH
T ss_pred ccHHHHHHHHHHHHHH-----hhHHHHHHHHHHHHHh-------------CccchHHHHHHHHHHHHcCChH--HHHHHH
Confidence 4677787777765543 4577788888777763 7888999999999999999999 999999
Q ss_pred HHHHhccCCCCChhhHHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHHccCC-CChhHHHHHHHHHHhhccHHHHHHHHHH
Q psy7457 89 QRYLKNITPDSDPQTILDLSTRAAHVYHTA-RNFPQAASSLAIAFQYSAHL-IRPEHCNLYLEVLLELKRYETCVEVLRR 166 (497)
Q Consensus 89 ~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~-~~~~~Ai~~le~a~~~~~~~-f~~~~vNiLaEL~i~~k~y~~al~~I~~ 166 (497)
+++++. .|.+. .+...+|.+|... |+.++|+..+++++. .|.. ....-...++..+...|+|++|++.+++
T Consensus 66 ~~a~~~-~~~~~-----~~~~~l~~~~~~~~~~~~~A~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 138 (225)
T 2vq2_A 66 RQALSI-KPDSA-----EINNNYGWFLCGRLNRPAESMAYFDKALA-DPTYPTPYIANLNKGICSAKQGQFGLAEAYLKR 138 (225)
T ss_dssp HHHHHH-CTTCH-----HHHHHHHHHHHTTTCCHHHHHHHHHHHHT-STTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHh-CCCCh-----HHHHHHHHHHHHhcCcHHHHHHHHHHHHc-CcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 999999 88774 5778999999999 999999999999999 3322 2245678899999999999999999988
Q ss_pred hchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhcc-ccCcccccccch
Q psy7457 167 FANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLASL-KFDVEMYGTITV 245 (497)
Q Consensus 167 ~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l-~e~~ee~~D~~L 245 (497)
..... |. ..+....+|.++..+|+.+.+...+... ..++.+..+ .
T Consensus 139 ~~~~~--------------------------~~------~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~--~ 184 (225)
T 2vq2_A 139 SLAAQ--------------------------PQ------FPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQAD--D 184 (225)
T ss_dssp HHHHS--------------------------TT------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSCCHH--H
T ss_pred HHHhC--------------------------CC------CchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCHH--H
Confidence 65421 23 2467888999999999999888887666 444423344 5
Q ss_pred hhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHHHHHHHHhcCCCC
Q psy7457 246 YLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAVQVLVLLVSSEKY 299 (497)
Q Consensus 246 y~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al~~l~~L~~~~~y 299 (497)
+ .-.+..+...|.++.|..++..+......
T Consensus 185 ~------------------------~~~~~~~~~~~~~~~a~~~~~~~~~~~p~ 214 (225)
T 2vq2_A 185 L------------------------LLGWKIAKALGNAQAAYEYEAQLQANFPY 214 (225)
T ss_dssp H------------------------HHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred H------------------------HHHHHHHHhcCcHHHHHHHHHHHHHhCCC
Confidence 5 78889999999999999999998754433
No 38
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.12 E-value=6.8e-10 Score=98.43 Aligned_cols=169 Identities=9% Similarity=0.041 Sum_probs=144.5
Q ss_pred CChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHH
Q psy7457 9 ENPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGY 88 (497)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y 88 (497)
++|++|+.+++.-..+ .+.++|+-+|.+++.. +|++.+.+..++.+|.++|++. +|++.+
T Consensus 3 e~~~iy~~lG~~~~~~-----g~~~~A~~~~~~al~~-------------~p~~~~~~~~la~~~~~~~~~~--~a~~~~ 62 (184)
T 3vtx_A 3 ETTTIYMDIGDKKRTK-----GDFDGAIRAYKKVLKA-------------DPNNVETLLKLGKTYMDIGLPN--DAIESL 62 (184)
T ss_dssp -CHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHH-------------CTTCHHHHHHHHHHHHHTTCHH--HHHHHH
T ss_pred cHHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHh-------------CCCCHHHHHHHHHHHHHCCCHH--HHHHHH
Confidence 5799999999877655 3567889999888874 8999999999999999999999 999999
Q ss_pred HHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhc
Q psy7457 89 QRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFA 168 (497)
Q Consensus 89 ~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~ 168 (497)
++++.. .|.+. .+...++..+...++.+.|+..+..++...|.. +.-...++.+|..+|+|++|++.+++..
T Consensus 63 ~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~--~~~~~~lg~~~~~~g~~~~A~~~~~~~l 134 (184)
T 3vtx_A 63 KKFVVL-DTTSA-----EAYYILGSANFMIDEKQAAIDALQRAIALNTVY--ADAYYKLGLVYDSMGEHDKAIEAYEKTI 134 (184)
T ss_dssp HHHHHH-CCCCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHhc-CchhH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc--hHHHHHHHHHHHHhCCchhHHHHHHHHH
Confidence 999999 88775 678899999999999999999999999999864 5678889999999999999999998866
Q ss_pred hheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhcc-ccCc
Q psy7457 169 NIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLASL-KFDV 237 (497)
Q Consensus 169 ~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l-~e~~ 237 (497)
..- |.+ .+....+|.++..+|+.+++...+... +.+|
T Consensus 135 ~~~--------------------------p~~------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 172 (184)
T 3vtx_A 135 SIK--------------------------PGF------IRAYQSIGLAYEGKGLRDEAVKYFKKALEKEE 172 (184)
T ss_dssp HHC--------------------------TTC------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTH
T ss_pred Hhc--------------------------chh------hhHHHHHHHHHHHCCCHHHHHHHHHHHHhCCc
Confidence 421 342 467889999999999999888777655 4444
No 39
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.12 E-value=1.4e-09 Score=109.67 Aligned_cols=197 Identities=10% Similarity=0.020 Sum_probs=157.5
Q ss_pred hhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHH
Q psy7457 48 IEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASS 127 (497)
Q Consensus 48 ~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~ 127 (497)
...++.++...+|++...+..++.+|...|++. +|++.|+++++. .|.+. .+...+|.+|...|+.++|+..
T Consensus 289 A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~A~~~~~~~~~~-~~~~~-----~~~~~l~~~~~~~~~~~~A~~~ 360 (514)
T 2gw1_A 289 YYNYFDKALKLDSNNSSVYYHRGQMNFILQNYD--QAGKDFDKAKEL-DPENI-----FPYIQLACLAYRENKFDDCETL 360 (514)
T ss_dssp GGGHHHHHHTTCTTCTHHHHHHHHHHHHTTCTT--HHHHHHHHHHHT-CSSCS-----HHHHHHHHHTTTTTCHHHHHHH
T ss_pred HHHHHHHHhhcCcCCHHHHHHHHHHHHHhCCHH--HHHHHHHHHHHh-ChhhH-----HHHHHHHHHHHHcCCHHHHHHH
Confidence 333445555568999999999999999999999 999999999999 89876 6888999999999999999999
Q ss_pred HHHHHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCc
Q psy7457 128 LAIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPP 207 (497)
Q Consensus 128 le~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPi 207 (497)
++.++...|.. ..-.+.++.++...|+|++|++.+++..... |.......-+
T Consensus 361 ~~~~~~~~~~~--~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~--------------------------~~~~~~~~~~ 412 (514)
T 2gw1_A 361 FSEAKRKFPEA--PEVPNFFAEILTDKNDFDKALKQYDLAIELE--------------------------NKLDGIYVGI 412 (514)
T ss_dssp HHHHHHHSTTC--SHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH--------------------------HTSSSCSSCS
T ss_pred HHHHHHHcccC--HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhh--------------------------hccchHHHHH
Confidence 99999998864 5678889999999999999999998866421 1111000025
Q ss_pred chhHHHHHHHhh---cCCCCchhHHhhcc-ccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccH
Q psy7457 208 EILSKFVITLVH---LRSETQFPTLLASL-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYE 283 (497)
Q Consensus 208 DLr~KLgI~ll~---Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y 283 (497)
.....+|.++.+ +|+.+.+...+... ..++ +..+ .+ ..+|.+|...|.+
T Consensus 413 ~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~-~~~~--~~------------------------~~la~~~~~~g~~ 465 (514)
T 2gw1_A 413 APLVGKATLLTRNPTVENFIEATNLLEKASKLDP-RSEQ--AK------------------------IGLAQMKLQQEDI 465 (514)
T ss_dssp HHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCT-TCHH--HH------------------------HHHHHHHHHTTCH
T ss_pred HHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCc-ccHH--HH------------------------HHHHHHHHHhcCH
Confidence 578899999999 99988888777666 4443 2344 66 8999999999999
Q ss_pred HHHHHHHHHHhcCCCCChHHHHHHH
Q psy7457 284 AYAVQVLVLLVSSEKYNQPGVWKQL 308 (497)
Q Consensus 284 ~~Al~~l~~L~~~~~y~~~~vwl~l 308 (497)
.+|+.+|...+.....+ +.+|..+
T Consensus 466 ~~A~~~~~~a~~~~~~~-~~~~~~~ 489 (514)
T 2gw1_A 466 DEAITLFEESADLARTM-EEKLQAI 489 (514)
T ss_dssp HHHHHHHHHHHHHCSSH-HHHHHHH
T ss_pred HHHHHHHHHHHHhcccc-HHHHHHH
Confidence 99999999998876643 3334433
No 40
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.10 E-value=1.5e-09 Score=111.89 Aligned_cols=203 Identities=9% Similarity=0.014 Sum_probs=147.4
Q ss_pred cCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCC-cchhHHHHHHHHHHhccCCCCChhhHHHHH
Q psy7457 30 INPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGL-KNRGFVLAGYQRYLKNITPDSDPQTILDLS 108 (497)
Q Consensus 30 ~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~-~~~~~Al~~y~~il~~~~P~d~~~~~~~~~ 108 (497)
...++|+=+|.+++.. +|++...+..|+.+|.++|+ +. .|++.|+++++. .|.+. .+.
T Consensus 111 g~~~~Al~~~~~al~l-------------~P~~~~a~~~~g~~l~~~g~d~~--eAl~~~~~al~l-~P~~~-----~a~ 169 (382)
T 2h6f_A 111 ERSERAFKLTRDAIEL-------------NAANYTVWHFRRVLLKSLQKDLH--EEMNYITAIIEE-QPKNY-----QVW 169 (382)
T ss_dssp CCCHHHHHHHHHHHHH-------------CTTCHHHHHHHHHHHHHTTCCHH--HHHHHHHHHHHH-CTTCH-----HHH
T ss_pred CChHHHHHHHHHHHHh-------------CccCHHHHHHHHHHHHHcccCHH--HHHHHHHHHHHH-CCCCH-----HHH
Confidence 3456666666666653 88888888888888888886 88 888888888888 88774 677
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccc
Q psy7457 109 TRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEES 188 (497)
Q Consensus 109 k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~ 188 (497)
..++.+|...|++++|+..|++++...|.. ..-.+-++-++..+|+|++|+...++....-
T Consensus 170 ~~~g~~~~~~g~~~eAl~~~~kal~ldP~~--~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~----------------- 230 (382)
T 2h6f_A 170 HHRRVLVEWLRDPSQELEFIADILNQDAKN--YHAWQHRQWVIQEFKLWDNELQYVDQLLKED----------------- 230 (382)
T ss_dssp HHHHHHHHHHTCCTTHHHHHHHHHHHCTTC--HHHHHHHHHHHHHHTCCTTHHHHHHHHHHHC-----------------
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCccC--HHHHHHHHHHHHHcCChHHHHHHHHHHHHhC-----------------
Confidence 788888888888888888888888888865 3456667778888888888888887765421
Q ss_pred cccccccccCCCCCCCCCcchhHHHHHHHhhcCCC-Cchh-----HHhhcc-ccCcccccccchhhhhHHHHHHHHHHHH
Q psy7457 189 NIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSE-TQFP-----TLLASL-KFDVEMYGTITVYLDIAEALIQEHYEAY 261 (497)
Q Consensus 189 ~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~-~~~~-----~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~ 261 (497)
|.+ .+....+|.++.+++.. +++. ..+... ..+|. ... .+
T Consensus 231 ---------P~~------~~a~~~lg~~l~~l~~~~~eA~~~~el~~~~~Al~l~P~-~~~--a~--------------- 277 (382)
T 2h6f_A 231 ---------VRN------NSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKLVPH-NES--AW--------------- 277 (382)
T ss_dssp ---------TTC------HHHHHHHHHHHHHTTCSCSHHHHHHHHHHHHHHHHHSTT-CHH--HH---------------
T ss_pred ---------CCC------HHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHCCC-CHH--HH---------------
Confidence 332 35667788888884443 5441 222222 33332 223 55
Q ss_pred HHHhhhhhhHHHHHHHHhcc--cHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHhh
Q psy7457 262 AVQFKELVYLDIAEALIQEH--YEAYAVQVLVLLVSSEKYNQPGVWKQLAETYEKSE 316 (497)
Q Consensus 262 ~~~~~~~~~ldvaeAl~e~g--~y~~Al~~l~~L~~~~~y~~~~vwl~lAeCy~~l~ 316 (497)
.-.|.+|...| .+.+|+.++..+ . ..-+.+.++..+|+||.+++
T Consensus 278 ---------~~l~~ll~~~g~~~~~~a~~~~~~~-~-~~p~~~~al~~La~~~~~~~ 323 (382)
T 2h6f_A 278 ---------NYLKGILQDRGLSKYPNLLNQLLDL-Q-PSHSSPYLIAFLVDIYEDML 323 (382)
T ss_dssp ---------HHHHHHHTTTCGGGCHHHHHHHHHH-T-TTCCCHHHHHHHHHHHHHHH
T ss_pred ---------HHHHHHHHccCccchHHHHHHHHHh-c-cCCCCHHHHHHHHHHHHHHh
Confidence 78888899888 699999999988 3 33446677999999998874
No 41
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.08 E-value=2.6e-09 Score=100.96 Aligned_cols=223 Identities=8% Similarity=-0.031 Sum_probs=142.2
Q ss_pred ccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCC
Q psy7457 61 TILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIR 140 (497)
Q Consensus 61 ~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~ 140 (497)
.+.+.++.++..+...|++. +|++.|+++++. .|.+. .+...+|..|...|+.++|++.+++++...|..
T Consensus 19 ~~~~~~~~~a~~~~~~~~~~--~A~~~~~~~~~~-~~~~~-----~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~-- 88 (327)
T 3cv0_A 19 MYHENPMEEGLSMLKLANLA--EAALAFEAVCQA-APERE-----EAWRSLGLTQAENEKDGLAIIALNHARMLDPKD-- 88 (327)
T ss_dssp GGSSCHHHHHHHHHHTTCHH--HHHHHHHHHHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--
T ss_pred hhhHHHHHHHHHHHHhccHH--HHHHHHHHHHHh-CCCCH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCC--
Confidence 46678899999999999999 999999999999 88764 577789999999999999999999999998864
Q ss_pred hhHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHH-HH-HHh
Q psy7457 141 PEHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKF-VI-TLV 218 (497)
Q Consensus 141 ~~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KL-gI-~ll 218 (497)
..-...++.++...|+|++|++.+++..... .... .... ......|... ....+ +. ++.
T Consensus 89 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~--~~~~--------~~~~--~~~~~~~~~~-------~~~~~~~~~~~~ 149 (327)
T 3cv0_A 89 IAVHAALAVSHTNEHNANAALASLRAWLLSQ--PQYE--------QLGS--VNLQADVDID-------DLNVQSEDFFFA 149 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTS--TTTT--------TC-----------------------------CCTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CccH--------HHHH--HHhHHHHHHH-------HHHHHHHhHHHH
Confidence 5667889999999999999999998866421 0000 0000 0000001111 00122 22 356
Q ss_pred hcCCCCchhHHhhcc-ccCcccccccchhhhhHHHHHHHH-HHHHHHHhh---------hhhhHHHHHHHHhcccHHHHH
Q psy7457 219 HLRSETQFPTLLASL-KFDVEMYGTITVYLDIAEALIQEH-YEAYAVQFK---------ELVYLDIAEALIQEHYEAYAV 287 (497)
Q Consensus 219 ~Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~-~~~~~~~~~---------~~~~ldvaeAl~e~g~y~~Al 287 (497)
..|+.+.+...+... ..++. ... .++..+....... |+.+...|. ...+..+|.+|...|.+++|+
T Consensus 150 ~~~~~~~A~~~~~~~~~~~~~-~~~--~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~ 226 (327)
T 3cv0_A 150 APNEYRECRTLLHAALEMNPN-DAQ--LHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEAL 226 (327)
T ss_dssp SHHHHHHHHHHHHHHHHHSTT-CHH--HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HcccHHHHHHHHHHHHhhCCC-CHH--HHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHH
Confidence 666666666666655 44443 233 5534444433333 555544444 124566666666666666666
Q ss_pred HHHHHHhcCCCCChHHHHHHHHHHHHHhh
Q psy7457 288 QVLVLLVSSEKYNQPGVWKQLAETYEKSE 316 (497)
Q Consensus 288 ~~l~~L~~~~~y~~~~vwl~lAeCy~~l~ 316 (497)
.+|...+..... .+.+|..+|.||.+.+
T Consensus 227 ~~~~~a~~~~~~-~~~~~~~l~~~~~~~g 254 (327)
T 3cv0_A 227 DAYNRALDINPG-YVRVMYNMAVSYSNMS 254 (327)
T ss_dssp HHHHHHHHHCTT-CHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCC-CHHHHHHHHHHHHHhc
Confidence 666665554332 3344666666666544
No 42
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.08 E-value=3.7e-10 Score=104.65 Aligned_cols=213 Identities=15% Similarity=0.059 Sum_probs=160.1
Q ss_pred ccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHH
Q psy7457 27 IQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILD 106 (497)
Q Consensus 27 ~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~ 106 (497)
....+.++|+=+|.+++... ..++|.+...+..++.+|...|++. +|++.|+++++. .|.+. .
T Consensus 16 ~~~~~~~~A~~~~~~~~~~~---------~~~~~~~~~~~~~l~~~~~~~~~~~--~A~~~~~~al~~-~~~~~-----~ 78 (275)
T 1xnf_A 16 QPTLQQEVILARMEQILASR---------ALTDDERAQLLYERGVLYDSLGLRA--LARNDFSQALAI-RPDMP-----E 78 (275)
T ss_dssp CCCHHHHHHHHHHHHHHTSS---------CCCHHHHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-CCCCH-----H
T ss_pred CccchHHHHHHHHHHHHhcc---------cccCchhHHHHHHHHHHHHHcccHH--HHHHHHHHHHHc-CCCcH-----H
Confidence 33445555666666655531 1236788999999999999999999 999999999999 88874 6
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCc
Q psy7457 107 LSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGE 186 (497)
Q Consensus 107 ~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~ 186 (497)
+...+|.+|...|++++|+..|++++...|.. ..-...++.+|...|+|++|++.+++.....
T Consensus 79 ~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~--~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~--------------- 141 (275)
T 1xnf_A 79 VFNYLGIYLTQAGNFDAAYEAFDSVLELDPTY--NYAHLNRGIALYYGGRDKLAQDDLLAFYQDD--------------- 141 (275)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--THHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---------------
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhcCccc--cHHHHHHHHHHHHhccHHHHHHHHHHHHHhC---------------
Confidence 78899999999999999999999999999865 4678889999999999999999998876421
Q ss_pred cccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhcc-ccCcccccccchhhhhHHHHHHHHHHHHHHHh
Q psy7457 187 ESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLASL-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQF 265 (497)
Q Consensus 187 ~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~ 265 (497)
|.+. .....++++ ...|+.+.+...+... ...+.. . ..
T Consensus 142 -----------~~~~------~~~~~~~~~-~~~~~~~~A~~~~~~~~~~~~~~-~---~~------------------- 180 (275)
T 1xnf_A 142 -----------PNDP------FRSLWLYLA-EQKLDEKQAKEVLKQHFEKSDKE-Q---WG------------------- 180 (275)
T ss_dssp -----------TTCH------HHHHHHHHH-HHHHCHHHHHHHHHHHHHHSCCC-S---TH-------------------
T ss_pred -----------CCCh------HHHHHHHHH-HHhcCHHHHHHHHHHHHhcCCcc-h---HH-------------------
Confidence 2321 223334444 5557777766666444 333322 1 22
Q ss_pred hhhhhHHHHHHHHhcccHHHHHHHHHHHhcCCCCC---hHHHHHHHHHHHHHhhhcc
Q psy7457 266 KELVYLDIAEALIQEHYEAYAVQVLVLLVSSEKYN---QPGVWKQLAETYEKSECLS 319 (497)
Q Consensus 266 ~~~~~ldvaeAl~e~g~y~~Al~~l~~L~~~~~y~---~~~vwl~lAeCy~~l~~l~ 319 (497)
.-.+..+...+.+.+|+..+...+....-. .+.+|..+|.||.+.+..+
T Consensus 181 -----~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 232 (275)
T 1xnf_A 181 -----WNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLD 232 (275)
T ss_dssp -----HHHHHHHTTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred -----HHHHHHHHHhcCHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHcCCHH
Confidence 457888889999999999999887664422 3678999999999877544
No 43
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.05 E-value=7.5e-09 Score=94.38 Aligned_cols=240 Identities=9% Similarity=-0.001 Sum_probs=174.0
Q ss_pred ccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCC-
Q psy7457 61 TILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLI- 139 (497)
Q Consensus 61 ~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f- 139 (497)
+..+.+..++..+...|++. +|++.|+++++. . .+. .+...+|..|...|+.++|++.+++++...|...
T Consensus 3 ~~a~~~~~~g~~~~~~~~~~--~A~~~~~~a~~~-~-~~~-----~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~ 73 (258)
T 3uq3_A 3 SMADKEKAEGNKFYKARQFD--EAIEHYNKAWEL-H-KDI-----TYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRA 73 (258)
T ss_dssp HHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-S-CCT-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHhccHH--HHHHHHHHHHHh-h-ccH-----HHHHHHHHHHHHcccHHHHHHHHHHHHHhCccccc
Confidence 45788999999999999999 999999999999 6 443 6888999999999999999999999999888653
Q ss_pred C----hhHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHH
Q psy7457 140 R----PEHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVI 215 (497)
Q Consensus 140 ~----~~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI 215 (497)
+ ..-...++.+|...|+|++|++.+++..... |. +.
T Consensus 74 ~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~--------------------------~~--------------~~ 113 (258)
T 3uq3_A 74 DYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEH--------------------------RT--------------AD 113 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------------------------CC--------------HH
T ss_pred chHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcC--------------------------ch--------------hH
Confidence 2 3567889999999999999999998876421 11 22
Q ss_pred HHhhcCCCCchhHHhhcc-ccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHHHHHHHHh
Q psy7457 216 TLVHLRSETQFPTLLASL-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAVQVLVLLV 294 (497)
Q Consensus 216 ~ll~Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al~~l~~L~ 294 (497)
++..+|+.+.+...+... ..++ +.++ .+ ..+|.+|...|.|.+|+.+|...+
T Consensus 114 ~~~~~~~~~~a~~~~~~~~~~~~-~~~~--~~------------------------~~~~~~~~~~~~~~~A~~~~~~a~ 166 (258)
T 3uq3_A 114 ILTKLRNAEKELKKAEAEAYVNP-EKAE--EA------------------------RLEGKEYFTKSDWPNAVKAYTEMI 166 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCH-HHHH--HH------------------------HHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHcCc-chHH--HH------------------------HHHHHHHHHhcCHHHHHHHHHHHH
Confidence 455566666655555544 3333 3344 66 999999999999999999999998
Q ss_pred cCCCCChHHHHHHHHHHHHHhhhccCcccccccCCCchHHHHHHHhhh-hhcccccccHHHHhhccccccccccccCCcc
Q psy7457 295 SSEKYNQPGVWKQLAETYEKSECLSGVVVSTVDTGSGSWWFQSMSSAM-CSTVLIKDSTEHLDQLSLDATTVLYKTGHIP 373 (497)
Q Consensus 295 ~~~~y~~~~vwl~lAeCy~~l~~l~~~~~~~~d~~~~~~w~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~ 373 (497)
..... .+.+|..+|.||.+.+..+.. ...++.+. ..|.. -.-...++ .+....|++.
T Consensus 167 ~~~~~-~~~~~~~l~~~~~~~~~~~~A-------------~~~~~~al~~~~~~----~~~~~~l~----~~~~~~g~~~ 224 (258)
T 3uq3_A 167 KRAPE-DARGYSNRAAALAKLMSFPEA-------------IADCNKAIEKDPNF----VRAYIRKA----TAQIAVKEYA 224 (258)
T ss_dssp HHCTT-CHHHHHHHHHHHHHTTCHHHH-------------HHHHHHHHHHCTTC----HHHHHHHH----HHHHHTTCHH
T ss_pred hcCcc-cHHHHHHHHHHHHHhCCHHHH-------------HHHHHHHHHhCHHH----HHHHHHHH----HHHHHHhhHH
Confidence 87554 456799999999987743211 11111111 11110 01111111 2445568999
Q ss_pred hhHHHHHHHHHhc------CCCccchhhhhc
Q psy7457 374 HAYQLFRVLMLKN------LDSKVVLNLMNL 398 (497)
Q Consensus 374 ~ay~~~r~~~~~~------~~~~~~wnlfn~ 398 (497)
.|...++..+..+ ++...+|+.+..
T Consensus 225 ~A~~~~~~a~~~~~~~~~~p~~~~~~~~l~~ 255 (258)
T 3uq3_A 225 SALETLDAARTKDAEVNNGSSAREIDQLYYK 255 (258)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHhChhhcCCCchHHHHHHHHH
Confidence 9999998888777 777777776644
No 44
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.05 E-value=3.5e-09 Score=103.22 Aligned_cols=225 Identities=7% Similarity=-0.007 Sum_probs=164.1
Q ss_pred hHHHHHHHHHHHhhhcccccCC----ccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHH-------hCCc
Q psy7457 11 PQEYYSLLNLVLSQHSIQVINP----DESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDE-------IGLK 79 (497)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~----~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~e-------lG~~ 79 (497)
...|.+.+..=-+. .....++ ++|+.+|.|++. .+|.+.+.+..++.++.+ .|+.
T Consensus 8 ~~~W~~yi~~E~~~-~~~~~~~~~~~~~a~~~~~~al~-------------~~p~~~~~w~~~~~~~~~~~~~l~~~g~~ 73 (308)
T 2ond_A 8 VDMWKKYIQWEKSN-PLRTEDQTLITKRVMFAYEQCLL-------------VLGHHPDIWYEAAQYLEQSSKLLAEKGDM 73 (308)
T ss_dssp HHHHHHHHHHHHTC-TTCCCCHHHHHHHHHHHHHHHHH-------------HHTTCHHHHHHHHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHhC-cccCCchHHHHHHHHHHHHHHHH-------------HcCCCHHHHHHHHHHHHHhchhhhhccch
Confidence 46788887762221 1112222 455566666665 489999999999999875 5886
Q ss_pred -------chhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHH
Q psy7457 80 -------NRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLL 152 (497)
Q Consensus 80 -------~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i 152 (497)
. +|++.|++.++.+.|.+. .+--.+|.++...|++++|+.+|++++...|...+ .-.+.++.++.
T Consensus 74 ~~~~~~~~--~A~~~~~rAl~~~~p~~~-----~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~-~~~~~~~~~~~ 145 (308)
T 2ond_A 74 NNAKLFSD--EAANIYERAISTLLKKNM-----LLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPT-LVYIQYMKFAR 145 (308)
T ss_dssp HHHHHHHH--HHHHHHHHHHTTTTTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTH-HHHHHHHHHHH
T ss_pred hhcccchH--HHHHHHHHHHHHhCcccH-----HHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCcc-HHHHHHHHHHH
Confidence 7 999999999994155543 46678899999999999999999999998876532 15677889999
Q ss_pred hhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhh---cCCCCchhHH
Q psy7457 153 ELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVH---LRSETQFPTL 229 (497)
Q Consensus 153 ~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~---Lg~~~~~~~l 229 (497)
..|++++|++++.+....- |.. .++ -++.+++. +|+.+.+..+
T Consensus 146 ~~~~~~~A~~~~~~a~~~~--------------------------p~~------~~~--~~~~a~~~~~~~~~~~~A~~~ 191 (308)
T 2ond_A 146 RAEGIKSGRMIFKKAREDA--------------------------RTR------HHV--YVTAALMEYYCSKDKSVAFKI 191 (308)
T ss_dssp HHHCHHHHHHHHHHHHTST--------------------------TCC------THH--HHHHHHHHHHTSCCHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHhcC--------------------------CCC------HHH--HHHHHHHHHHHcCCHHHHHHH
Confidence 9999999999998876310 222 223 33444443 6887777777
Q ss_pred hhcc-ccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHHHHHHHHhcCCC---CChHHHH
Q psy7457 230 LASL-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAVQVLVLLVSSEK---YNQPGVW 305 (497)
Q Consensus 230 ~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al~~l~~L~~~~~---y~~~~vw 305 (497)
++.. ..+| +.++ ++ ...|+.+...|.+++|..+|...+.... -+...+|
T Consensus 192 ~~~al~~~p-~~~~--~~------------------------~~~~~~~~~~g~~~~A~~~~~~al~~~~l~p~~~~~l~ 244 (308)
T 2ond_A 192 FELGLKKYG-DIPE--YV------------------------LAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIW 244 (308)
T ss_dssp HHHHHHHHT-TCHH--HH------------------------HHHHHHHHTTCCHHHHHHHHHHHHHSSSSCGGGCHHHH
T ss_pred HHHHHHhCC-CcHH--HH------------------------HHHHHHHHHCCCHHHHHHHHHHHHhccCCCHHHHHHHH
Confidence 7655 4444 2345 77 9999999999999999999999998632 2467799
Q ss_pred HHHHHHHHHhhhc
Q psy7457 306 KQLAETYEKSECL 318 (497)
Q Consensus 306 l~lAeCy~~l~~l 318 (497)
..+++.+.+.+..
T Consensus 245 ~~~~~~~~~~g~~ 257 (308)
T 2ond_A 245 ARFLAFESNIGDL 257 (308)
T ss_dssp HHHHHHHHHHSCH
T ss_pred HHHHHHHHHcCCH
Confidence 9999998886643
No 45
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.04 E-value=3.8e-09 Score=90.98 Aligned_cols=169 Identities=11% Similarity=0.022 Sum_probs=141.2
Q ss_pred CccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCC
Q psy7457 60 DTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLI 139 (497)
Q Consensus 60 p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f 139 (497)
+.....+..++..+...|++. +|++.|+++++. .|.+. .+...+|.+|...|+.++|+..++.++...|..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~--~A~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~- 75 (186)
T 3as5_A 5 DIRQVYYRDKGISHAKAGRYS--QAVMLLEQVYDA-DAFDV-----DVALHLGIAYVKTGAVDRGTELLERSLADAPDN- 75 (186)
T ss_dssp CHHHHHHHHHHHHHHHHTCHH--HHHHHHTTTCCT-TSCCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-
T ss_pred chhhHHHHHHHHHHHHhcCHH--HHHHHHHHHHHh-CccCh-----HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC-
Confidence 345778889999999999999 999999999999 88763 688899999999999999999999999998854
Q ss_pred ChhHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhh
Q psy7457 140 RPEHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVH 219 (497)
Q Consensus 140 ~~~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~ 219 (497)
..-...++.++...|+|++|++.+++..... |. ...+...+|.++..
T Consensus 76 -~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~--------------------------~~------~~~~~~~~a~~~~~ 122 (186)
T 3as5_A 76 -VKVATVLGLTYVQVQKYDLAVPLLIKVAEAN--------------------------PI------NFNVRFRLGVALDN 122 (186)
T ss_dssp -HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--------------------------TT------CHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC--------------------------cH------hHHHHHHHHHHHHH
Confidence 5667889999999999999999998866421 23 23577889999999
Q ss_pred cCCCCchhHHhhcc-ccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHHHHHHHHhcCC
Q psy7457 220 LRSETQFPTLLASL-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAVQVLVLLVSSE 297 (497)
Q Consensus 220 Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al~~l~~L~~~~ 297 (497)
+|+.+.+...+... ..++.. .. .+ ..+|.+|...|++++|+.+|...+...
T Consensus 123 ~~~~~~A~~~~~~~~~~~~~~-~~--~~------------------------~~la~~~~~~~~~~~A~~~~~~~~~~~ 174 (186)
T 3as5_A 123 LGRFDEAIDSFKIALGLRPNE-GK--VH------------------------RAIAFSYEQMGRHEEALPHFKKANELD 174 (186)
T ss_dssp TTCHHHHHHHHHHHHHHCTTC-HH--HH------------------------HHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHhcCccc-hH--HH------------------------HHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 99998888887666 444322 34 66 899999999999999999998876543
No 46
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.00 E-value=2.3e-08 Score=94.34 Aligned_cols=206 Identities=8% Similarity=-0.011 Sum_probs=164.7
Q ss_pred CChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHH----hCCcchhHH
Q psy7457 9 ENPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDE----IGLKNRGFV 84 (497)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~e----lG~~~~~~A 84 (497)
.+|+.|+.+++..+.+. ++++|+-+|.+++. |.+...++..+.+|.+ .|++. +|
T Consensus 4 ~~~~a~~~lg~~~~~~~-----~~~~A~~~~~~a~~---------------~~~~~a~~~lg~~~~~g~~~~~~~~--~A 61 (273)
T 1ouv_A 4 QDPKELVGLGAKSYKEK-----DFTQAKKYFEKACD---------------LKENSGCFNLGVLYYQGQGVEKNLK--KA 61 (273)
T ss_dssp -CHHHHHHHHHHHHHTT-----CHHHHHHHHHHHHH---------------TTCHHHHHHHHHHHHHTSSSCCCHH--HH
T ss_pred CChHHHHHHHHHHHhCC-----CHHHHHHHHHHHHH---------------CCCHHHHHHHHHHHHcCCCcCCCHH--HH
Confidence 47888888888776553 67788888887765 3456788999999999 99999 99
Q ss_pred HHHHHHHHhccCCCCChhhHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHh----hcc
Q psy7457 85 LAGYQRYLKNITPDSDPQTILDLSTRAAHVYHT----ARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLE----LKR 156 (497)
Q Consensus 85 l~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e----~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~----~k~ 156 (497)
++.|++.++. - . ......++.+|.. .++.++|+..|+++.+.. .....+.|+.+|.. .++
T Consensus 62 ~~~~~~a~~~-~---~----~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~----~~~a~~~lg~~~~~~~~~~~~ 129 (273)
T 1ouv_A 62 ASFYAKACDL-N---Y----SNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK----YAEGCASLGGIYHDGKVVTRD 129 (273)
T ss_dssp HHHHHHHHHT-T---C----HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT----CHHHHHHHHHHHHHCSSSCCC
T ss_pred HHHHHHHHHC-C---C----HHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC----CccHHHHHHHHHHcCCCcccC
Confidence 9999999988 3 2 2577899999999 999999999999999863 46778889999999 999
Q ss_pred HHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhh----cCCCCchhHHhhc
Q psy7457 157 YETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVH----LRSETQFPTLLAS 232 (497)
Q Consensus 157 y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~----Lg~~~~~~~l~~~ 232 (497)
+++|++++++.... + |.+....+|.++.. .++.+++...+..
T Consensus 130 ~~~A~~~~~~a~~~----------------------------~------~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~ 175 (273)
T 1ouv_A 130 FKKAVEYFTKACDL----------------------------N------DGDGCTILGSLYDAGRGTPKDLKKALASYDK 175 (273)
T ss_dssp HHHHHHHHHHHHHT----------------------------T------CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc----------------------------C------cHHHHHHHHHHHHcCCCCCCCHHHHHHHHHH
Confidence 99999999887741 1 45667888888887 7777766666544
Q ss_pred c-ccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHh----cccHHHHHHHHHHHhcCCCCChHHHHHH
Q psy7457 233 L-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQ----EHYEAYAVQVLVLLVSSEKYNQPGVWKQ 307 (497)
Q Consensus 233 l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e----~g~y~~Al~~l~~L~~~~~y~~~~vwl~ 307 (497)
. .. ++.+.+ ..+|.+|.. .+.+++|+.+|....... .+..+..
T Consensus 176 a~~~-----~~~~a~------------------------~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~---~~~a~~~ 223 (273)
T 1ouv_A 176 ACDL-----KDSPGC------------------------FNAGNMYHHGEGATKNFKEALARYSKACELE---NGGGCFN 223 (273)
T ss_dssp HHHT-----TCHHHH------------------------HHHHHHHHHTCSSCCCHHHHHHHHHHHHHTT---CHHHHHH
T ss_pred HHHC-----CCHHHH------------------------HHHHHHHHcCCCCCccHHHHHHHHHHHHhCC---CHHHHHH
Confidence 3 22 232266 899999999 999999999999988764 3667999
Q ss_pred HHHHHHH
Q psy7457 308 LAETYEK 314 (497)
Q Consensus 308 lAeCy~~ 314 (497)
+|.||.+
T Consensus 224 l~~~~~~ 230 (273)
T 1ouv_A 224 LGAMQYN 230 (273)
T ss_dssp HHHHHHT
T ss_pred HHHHHHc
Confidence 9999987
No 47
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.00 E-value=1.3e-09 Score=102.32 Aligned_cols=188 Identities=11% Similarity=0.066 Sum_probs=140.8
Q ss_pred hcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCC---ChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q psy7457 55 RGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDS---DPQTILDLSTRAAHVYHTARNFPQAASSLAIA 131 (497)
Q Consensus 55 ~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d---~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a 131 (497)
.+.++|.+...+...+..|...|++. +|++.|+++++. .+.. +......+...+|.+|...|++++|+..++++
T Consensus 19 ~~~~~~~~~~~~~~l~~~~~~~g~~~--~A~~~~~~a~~~-~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 95 (311)
T 3nf1_A 19 GGYEIPARLRTLHNLVIQYASQGRYE--VAVPLCKQALED-LEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDA 95 (311)
T ss_dssp SCTTSCHHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-HHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCcchHHHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHH-HHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 45678999999999999999999999 999999999985 3210 11334578899999999999999999999999
Q ss_pred HHHccCC------CChhHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCC
Q psy7457 132 FQYSAHL------IRPEHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVP 205 (497)
Q Consensus 132 ~~~~~~~------f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~l 205 (497)
+...... ....-.+.++.+|...|+|++|++.+++...... .. .+.+. ..
T Consensus 96 l~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~--~~--------------------~~~~~--~~ 151 (311)
T 3nf1_A 96 LAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIRE--KV--------------------LGKDH--PD 151 (311)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH--HH--------------------HCTTC--HH
T ss_pred HHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHH--Hh--------------------cCCCC--hH
Confidence 9975221 2235578899999999999999999988664321 00 00111 00
Q ss_pred CcchhHHHHHHHhhcCCCCchhHHhhcc-cc-------CcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHH
Q psy7457 206 PPEILSKFVITLVHLRSETQFPTLLASL-KF-------DVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEAL 277 (497)
Q Consensus 206 PiDLr~KLgI~ll~Lg~~~~~~~l~~~l-~e-------~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl 277 (497)
-......+|.++..+|+.+.+...+... .. +...... .+ ..+|.+|
T Consensus 152 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~--~~------------------------~~la~~~ 205 (311)
T 3nf1_A 152 VAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAK--TK------------------------NNLASCY 205 (311)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHH--HH------------------------HHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHH--HH------------------------HHHHHHH
Confidence 2456778899999999988877776544 21 1112223 44 8899999
Q ss_pred HhcccHHHHHHHHHHHhc
Q psy7457 278 IQEHYEAYAVQVLVLLVS 295 (497)
Q Consensus 278 ~e~g~y~~Al~~l~~L~~ 295 (497)
...|.+++|+.+|...+.
T Consensus 206 ~~~g~~~~A~~~~~~al~ 223 (311)
T 3nf1_A 206 LKQGKFKQAETLYKEILT 223 (311)
T ss_dssp HHHTCHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHH
Confidence 999999999999998885
No 48
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.99 E-value=3.1e-09 Score=99.47 Aligned_cols=248 Identities=9% Similarity=-0.049 Sum_probs=167.6
Q ss_pred cccccCCccceehhhcccCcchhhhHHHhhcCCCCcc----HHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCC-CC
Q psy7457 26 SIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTI----LDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPD-SD 100 (497)
Q Consensus 26 ~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n----~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~-d~ 100 (497)
-....++++|+-+|.+++.. +|++ ...+...+.+|...|++. +|++.|++.++. .+. .+
T Consensus 15 ~~~~g~~~~A~~~~~~al~~-------------~~~~~~~~~~~~~~l~~~~~~~g~~~--~A~~~~~~al~~-~~~~~~ 78 (338)
T 3ro2_A 15 LCKSGDCRAGVSFFEAAVQV-------------GTEDLKTLSAIYSQLGNAYFYLHDYA--KALEYHHHDLTL-ARTIGD 78 (338)
T ss_dssp HHHTTCHHHHHHHHHHHHHH-------------CCSCHHHHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-HHHHTC
T ss_pred HHHhccHHHHHHHHHHHHhh-------------CcccHHHHHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHH-hhcccc
Confidence 33456778888888888773 4555 578889999999999999 999999998876 332 22
Q ss_pred hhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCCh----hHHHHHHHHHHhhcc--------------------
Q psy7457 101 PQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRP----EHCNLYLEVLLELKR-------------------- 156 (497)
Q Consensus 101 ~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~----~~vNiLaEL~i~~k~-------------------- 156 (497)
......+...+|.+|...|++++|+..+++++...+..-+. .-.+.++.+|...|+
T Consensus 79 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 158 (338)
T 3ro2_A 79 QLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNA 158 (338)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHH
Confidence 34456788999999999999999999999999988765442 357788999999999
Q ss_pred HHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhcc-cc
Q psy7457 157 YETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLASL-KF 235 (497)
Q Consensus 157 y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l-~e 235 (497)
|++|++.+++.-...- .. ++.. .-..+...+|.++..+|+.+.+...+... ..
T Consensus 159 ~~~A~~~~~~a~~~~~--~~---------------------~~~~---~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 212 (338)
T 3ro2_A 159 LQAAVDLYEENLSLVT--AL---------------------GDRA---AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLI 212 (338)
T ss_dssp HHHHHHHHHHHHHHHH--HH---------------------TCHH---HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH--hc---------------------CCHH---HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 9999999877554211 00 0000 02346677888888888887766665443 11
Q ss_pred -----CcccccccchhhhhHHHHHHHH-HHHHHHHhh---------------hhhhHHHHHHHHhcccHHHHHHHHHHHh
Q psy7457 236 -----DVEMYGTITVYLDIAEALIQEH-YEAYAVQFK---------------ELVYLDIAEALIQEHYEAYAVQVLVLLV 294 (497)
Q Consensus 236 -----~~ee~~D~~Ly~~~~~~~~~~~-~~~~~~~~~---------------~~~~ldvaeAl~e~g~y~~Al~~l~~L~ 294 (497)
++...+. .++..+....... |+.+...|. -.++..+|.+|...|.+++|+.+|...+
T Consensus 213 ~~~~~~~~~~~~--~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~ 290 (338)
T 3ro2_A 213 AKEFGDKAAERR--AYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHL 290 (338)
T ss_dssp HHHHTCHHHHHH--HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHhcCChHHHHH--HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 1111222 3333333333332 444444443 1256778888888888888888887665
Q ss_pred cCCC-----CChHHHHHHHHHHHHHhhh
Q psy7457 295 SSEK-----YNQPGVWKQLAETYEKSEC 317 (497)
Q Consensus 295 ~~~~-----y~~~~vwl~lAeCy~~l~~ 317 (497)
.... .....++..+|.||.+.+.
T Consensus 291 ~~~~~~~~~~~~~~~~~~la~~~~~~g~ 318 (338)
T 3ro2_A 291 AIAQELKDRIGEGRACWSLGNAYTALGN 318 (338)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHhcCCcHHHHHHHHHHHHHHHHcCC
Confidence 4321 2234467788888877664
No 49
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.99 E-value=2.9e-09 Score=118.78 Aligned_cols=170 Identities=15% Similarity=0.085 Sum_probs=146.3
Q ss_pred CCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHcc
Q psy7457 57 LSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSA 136 (497)
Q Consensus 57 ~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~ 136 (497)
-|.|++.+.+...+.+|.+.|++. +|++.|++.++. .|.+. ++...+|.+|.++|+.++|++.|+++++..|
T Consensus 3 gs~P~~a~al~nLG~~~~~~G~~~--eAi~~~~kAl~l-~P~~~-----~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P 74 (723)
T 4gyw_A 3 GSCPTHADSLNNLANIKREQGNIE--EAVRLYRKALEV-FPEFA-----AAHSNLASVLQQQGKLQEALMHYKEAIRISP 74 (723)
T ss_dssp ---CHHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-CSCCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred CCCCCcHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHh-CCCCH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 368999999999999999999999 999999999999 99875 6888999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHH
Q psy7457 137 HLIRPEHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVIT 216 (497)
Q Consensus 137 ~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ 216 (497)
+. .+-.+-|+.+|..+|+|++|++..++....- |+. .+....||.+
T Consensus 75 ~~--~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~--------------------------P~~------~~a~~~Lg~~ 120 (723)
T 4gyw_A 75 TF--ADAYSNMGNTLKEMQDVQGALQCYTRAIQIN--------------------------PAF------ADAHSNLASI 120 (723)
T ss_dssp TC--HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------------------------TTC------HHHHHHHHHH
T ss_pred CC--HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------------------------CCC------HHHHHHHHHH
Confidence 75 5678889999999999999999998876421 443 4678899999
Q ss_pred HhhcCCCCchhHHhhcc-ccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHHHHHHHHhc
Q psy7457 217 LVHLRSETQFPTLLASL-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAVQVLVLLVS 295 (497)
Q Consensus 217 ll~Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al~~l~~L~~ 295 (497)
+..+|+.+++...++.. +.+| +..+ .+ ..+|.+|...|.|++|++.|..++.
T Consensus 121 ~~~~g~~~eAi~~~~~Al~l~P-~~~~--a~------------------------~~L~~~l~~~g~~~~A~~~~~kal~ 173 (723)
T 4gyw_A 121 HKDSGNIPEAIASYRTALKLKP-DFPD--AY------------------------CNLAHCLQIVCDWTDYDERMKKLVS 173 (723)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCS-CCHH--HH------------------------HHHHHHHHHTTCCTTHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCC-CChH--HH------------------------hhhhhHHHhcccHHHHHHHHHHHHH
Confidence 99999999988887666 5555 3455 77 9999999999999999999987764
No 50
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=98.96 E-value=8.2e-09 Score=101.20 Aligned_cols=184 Identities=14% Similarity=0.083 Sum_probs=135.9
Q ss_pred CCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhcc-CCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHcc
Q psy7457 58 SKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNI-TPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSA 136 (497)
Q Consensus 58 ~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~-~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~ 136 (497)
.+|.++..+-..+.+|...|+.. +|++.|++++..- .|.+. .+.-.+|.+|...|+.++|++.|++ |
T Consensus 60 ~~~~~~~a~~~la~~~~~~~~~~--~A~~~l~~ll~~~~~P~~~-----~~~~~la~~~~~~g~~~~Al~~l~~-----~ 127 (291)
T 3mkr_A 60 SSAPELQAVRMFAEYLASHSRRD--AIVAELDREMSRSVDVTNT-----TFLLMAASIYFYDQNPDAALRTLHQ-----G 127 (291)
T ss_dssp TSCHHHHHHHHHHHHHHCSTTHH--HHHHHHHHHHHSCCCCSCH-----HHHHHHHHHHHHTTCHHHHHHHHTT-----C
T ss_pred cCChhHHHHHHHHHHHcCCCcHH--HHHHHHHHHHhcccCCCCH-----HHHHHHHHHHHHCCCHHHHHHHHhC-----C
Confidence 45667888888888888888888 8888888888651 36553 5667888888888888888888887 3
Q ss_pred CCCChhHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHH
Q psy7457 137 HLIRPEHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVIT 216 (497)
Q Consensus 137 ~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ 216 (497)
-+++-...++.+|..+|++++|++.+++...+- |+ +....++.+
T Consensus 128 --~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~--------------------------p~--------~~~~~l~~a 171 (291)
T 3mkr_A 128 --DSLECMAMTVQILLKLDRLDLARKELKKMQDQD--------------------------ED--------ATLTQLATA 171 (291)
T ss_dssp --CSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------------------------TT--------CHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhC--------------------------cC--------cHHHHHHHH
Confidence 345677888888888888888888888866421 22 234455544
Q ss_pred Hhhc----CCCCchhHHhhcc-ccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHHHHHH
Q psy7457 217 LVHL----RSETQFPTLLASL-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAVQVLV 291 (497)
Q Consensus 217 ll~L----g~~~~~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al~~l~ 291 (497)
++.+ |..+++..+++.+ ...| +..+ ++ ...|.+|+..|.+++|+..|.
T Consensus 172 ~~~l~~~~~~~~eA~~~~~~~l~~~p-~~~~--~~------------------------~~la~~~~~~g~~~eA~~~l~ 224 (291)
T 3mkr_A 172 WVSLAAGGEKLQDAYYIFQEMADKCS-PTLL--LL------------------------NGQAACHMAQGRWEAAEGVLQ 224 (291)
T ss_dssp HHHHHHCTTHHHHHHHHHHHHHHHSC-CCHH--HH------------------------HHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHhCchHHHHHHHHHHHHHHhCC-CcHH--HH------------------------HHHHHHHHHcCCHHHHHHHHH
Confidence 4433 5556666666666 4444 2344 66 999999999999999999999
Q ss_pred HHhcCCCCChHHHHHHHHHHHHHhhh
Q psy7457 292 LLVSSEKYNQPGVWKQLAETYEKSEC 317 (497)
Q Consensus 292 ~L~~~~~y~~~~vwl~lAeCy~~l~~ 317 (497)
..+..... .+.+|..+|.|+..++.
T Consensus 225 ~al~~~p~-~~~~l~~l~~~~~~~g~ 249 (291)
T 3mkr_A 225 EALDKDSG-HPETLINLVVLSQHLGK 249 (291)
T ss_dssp HHHHHCTT-CHHHHHHHHHHHHHTTC
T ss_pred HHHHhCCC-CHHHHHHHHHHHHHcCC
Confidence 98887665 45559999999988774
No 51
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.96 E-value=4.1e-09 Score=96.95 Aligned_cols=235 Identities=10% Similarity=0.000 Sum_probs=159.6
Q ss_pred cccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccC-----CCCC
Q psy7457 26 SIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNIT-----PDSD 100 (497)
Q Consensus 26 ~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~-----P~d~ 100 (497)
++...++++|+=+|.+++..-+ .....++|.....+...+.+|...|++. +|++.|+++++. . +.+
T Consensus 11 ~~~~~~~~~A~~~~~~al~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~g~~~--~A~~~~~~al~~-~~~~~~~~~- 81 (283)
T 3edt_B 11 SSGLVPRGSAVPLCKQALEDLE-----KTSGHDHPDVATMLNILALVYRDQNKYK--EAAHLLNDALAI-REKTLGKDH- 81 (283)
T ss_dssp --CCSCSSSHHHHHHHHHHHHH-----HHHCSSSHHHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-HHHHTCTTC-
T ss_pred cCCCCCHHHHHHHHHHHHHHHH-----HhcCCCCHHHHHHHHHHHHHHHHcccHH--HHHHHHHHHHHH-HHHHcCCcc-
Confidence 4557889999999999988421 1223456888999999999999999999 999999999987 5 322
Q ss_pred hhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCC------CChhHHHHHHHHHHhhccHHHHHHHHHHhchheeee
Q psy7457 101 PQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHL------IRPEHCNLYLEVLLELKRYETCVEVLRRFANIEITY 174 (497)
Q Consensus 101 ~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~------f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~ 174 (497)
.....+...+|.+|...|++++|++.|++++...... ....-.+.++.+|...|+|++|++.+++.....-..
T Consensus 82 -~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 160 (283)
T 3edt_B 82 -PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATR 160 (283)
T ss_dssp -HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred -hHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 2345788999999999999999999999999985221 123457889999999999999999998876532100
Q ss_pred ccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhcc-ccCcc--------cccccch
Q psy7457 175 FKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLASL-KFDVE--------MYGTITV 245 (497)
Q Consensus 175 ~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l-~e~~e--------e~~D~~L 245 (497)
. +.+. +.-......+|.++..+|+.+.+..++... ...++ .... +
T Consensus 161 -~---------------------~~~~--~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~--~ 214 (283)
T 3edt_B 161 -L---------------------GPDD--PNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFGSVNGDNKP--I 214 (283)
T ss_dssp -S---------------------CTTC--HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSSCCSSCCC--H
T ss_pred -c---------------------CCCC--HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCcchhHHH--H
Confidence 0 1111 002456778899999999988877776554 21111 1112 2
Q ss_pred hhhhHHHHHH-------HHHHHHHHHhh---------hhhhHHHHHHHHhcccHHHHHHHHHHHhcC
Q psy7457 246 YLDIAEALIQ-------EHYEAYAVQFK---------ELVYLDIAEALIQEHYEAYAVQVLVLLVSS 296 (497)
Q Consensus 246 y~~~~~~~~~-------~~~~~~~~~~~---------~~~~ldvaeAl~e~g~y~~Al~~l~~L~~~ 296 (497)
+...+..... ..|......+. -..+..+|.+|...|.|++|+.+|...+..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 281 (283)
T 3edt_B 215 WMHAEEREESKDKRRDSAPYGEYGSWYKACKVDSPTVNTTLRSLGALYRRQGKLEAAHTLEDCASRN 281 (283)
T ss_dssp HHHHHHHHHTTCCCCC------------CCCCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCchhHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 2111000000 00222222222 236789999999999999999999887654
No 52
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=98.95 E-value=1.2e-08 Score=105.24 Aligned_cols=198 Identities=8% Similarity=-0.006 Sum_probs=147.2
Q ss_pred hhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHH
Q psy7457 47 KIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAAS 126 (497)
Q Consensus 47 ~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~ 126 (497)
+...++.+|...+|++...+..|+.+|..+|++. +|++.|+++++. -|.+. .+...++.+|...|+.++|+.
T Consensus 150 eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~--eAl~~~~kal~l-dP~~~-----~a~~~lg~~~~~~g~~~eAl~ 221 (382)
T 2h6f_A 150 EEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPS--QELEFIADILNQ-DAKNY-----HAWQHRQWVIQEFKLWDNELQ 221 (382)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCT--THHHHHHHHHHH-CTTCH-----HHHHHHHHHHHHHTCCTTHHH
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHH--HHHHHHHHHHHh-CccCH-----HHHHHHHHHHHHcCChHHHHH
Confidence 4445567777789999999999999999999999 999999999999 99885 677899999999999999999
Q ss_pred HHHHHHHHccCCCChhHHHHHHHHHHh-hccHHHHH-----HHHHHhchheeeeccCCCCCCCCCccccccccccccCCC
Q psy7457 127 SLAIAFQYSAHLIRPEHCNLYLEVLLE-LKRYETCV-----EVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSD 200 (497)
Q Consensus 127 ~le~a~~~~~~~f~~~~vNiLaEL~i~-~k~y~~al-----~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~ 200 (497)
.|++++...|+. .+-.+-++.+|.. .+.+++|+ ..+++.... -|++
T Consensus 222 ~~~~al~l~P~~--~~a~~~lg~~l~~l~~~~~eA~~~~el~~~~~Al~l--------------------------~P~~ 273 (382)
T 2h6f_A 222 YVDQLLKEDVRN--NSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKL--------------------------VPHN 273 (382)
T ss_dssp HHHHHHHHCTTC--HHHHHHHHHHHHHTTCSCSHHHHHHHHHHHHHHHHH--------------------------STTC
T ss_pred HHHHHHHhCCCC--HHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHH--------------------------CCCC
Confidence 999999999964 5667888888888 55557774 555554421 1443
Q ss_pred CCCCCCcchhHHHHHHHhhcCC--CCchhHHhhccccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHH
Q psy7457 201 PNLVPPPEILSKFVITLVHLRS--ETQFPTLLASLKFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALI 278 (497)
Q Consensus 201 l~l~lPiDLr~KLgI~ll~Lg~--~~~~~~l~~~l~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~ 278 (497)
.+...-+|.++.++|. .+.+...+..+..++ +... .+ .-+|++|.
T Consensus 274 ------~~a~~~l~~ll~~~g~~~~~~a~~~~~~~~~~p-~~~~--al------------------------~~La~~~~ 320 (382)
T 2h6f_A 274 ------ESAWNYLKGILQDRGLSKYPNLLNQLLDLQPSH-SSPY--LI------------------------AFLVDIYE 320 (382)
T ss_dssp ------HHHHHHHHHHHTTTCGGGCHHHHHHHHHHTTTC-CCHH--HH------------------------HHHHHHHH
T ss_pred ------HHHHHHHHHHHHccCccchHHHHHHHHHhccCC-CCHH--HH------------------------HHHHHHHH
Confidence 3567778888888773 333333332221111 1112 33 77888888
Q ss_pred hcc---------cHHHHHHHHHHH-hcCCCCChHHHHHHHHHHHHH
Q psy7457 279 QEH---------YEAYAVQVLVLL-VSSEKYNQPGVWKQLAETYEK 314 (497)
Q Consensus 279 e~g---------~y~~Al~~l~~L-~~~~~y~~~~vwl~lAeCy~~ 314 (497)
+.| .+++|+.+|..| +..+.- ....|..++.++..
T Consensus 321 ~~~~~~~~~~~~~~~~A~~~~~~l~~~~DP~-r~~~w~~~~~~l~~ 365 (382)
T 2h6f_A 321 DMLENQCDNKEDILNKALELCEILAKEKDTI-RKEYWRYIGRSLQS 365 (382)
T ss_dssp HHHHTTCSSHHHHHHHHHHHHHHHHHTTCGG-GHHHHHHHHHHHHH
T ss_pred HHhcccccchHHHHHHHHHHHHHHHHHhCch-hHHHHHHHHHHHHH
Confidence 874 369999999999 666543 44569999998876
No 53
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.93 E-value=2e-08 Score=97.75 Aligned_cols=212 Identities=11% Similarity=-0.020 Sum_probs=159.2
Q ss_pred CCChHHHHHHHHHHHhhhc--ccccCC-------ccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCC
Q psy7457 8 YENPQEYYSLLNLVLSQHS--IQVINP-------DESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGL 78 (497)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~--~~~~~~-------~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~ 78 (497)
-.+|+.|+..+........ .+..++ ++|+=+|.|++.. -+|++...+...+.++.+.|+
T Consensus 47 p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~------------~~p~~~~~~~~~~~~~~~~~~ 114 (308)
T 2ond_A 47 GHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAIST------------LLKKNMLLYFAYADYEESRMK 114 (308)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTT------------TTTTCHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHH------------hCcccHHHHHHHHHHHHhcCC
Confidence 3678899998888764311 011222 5566566665550 388999999999999999999
Q ss_pred cchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHH-hhccH
Q psy7457 79 KNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLL-ELKRY 157 (497)
Q Consensus 79 ~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i-~~k~y 157 (497)
+. +|.+.|+++++. -|.+. + .+.-.++..+...|+++.|+.+|++++...|.. +.-..-.+.+.. ..|++
T Consensus 115 ~~--~A~~~~~~al~~-~p~~~-~---~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~--~~~~~~~a~~~~~~~~~~ 185 (308)
T 2ond_A 115 YE--KVHSIYNRLLAI-EDIDP-T---LVYIQYMKFARRAEGIKSGRMIFKKAREDARTR--HHVYVTAALMEYYCSKDK 185 (308)
T ss_dssp HH--HHHHHHHHHHTS-SSSCT-H---HHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCC--THHHHHHHHHHHHTSCCH
T ss_pred HH--HHHHHHHHHHhc-cccCc-c---HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC--HHHHHHHHHHHHHHcCCH
Confidence 99 999999999998 77665 1 156678889999999999999999999988754 222222222212 26999
Q ss_pred HHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhcc-cc-
Q psy7457 158 ETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLASL-KF- 235 (497)
Q Consensus 158 ~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l-~e- 235 (497)
++|++++.+.... .|++ .++...+|..+.++|+.+.+..+++.. ..
T Consensus 186 ~~A~~~~~~al~~--------------------------~p~~------~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~ 233 (308)
T 2ond_A 186 SVAFKIFELGLKK--------------------------YGDI------PEYVLAYIDYLSHLNEDNNTRVLFERVLTSG 233 (308)
T ss_dssp HHHHHHHHHHHHH--------------------------HTTC------HHHHHHHHHHHHTTCCHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHh--------------------------CCCc------HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcc
Confidence 9999999886642 1443 377889999999999999988888776 42
Q ss_pred --CcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHHHHHHHHhcCCC
Q psy7457 236 --DVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAVQVLVLLVSSEK 298 (497)
Q Consensus 236 --~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al~~l~~L~~~~~ 298 (497)
+|++..+ ++ ...+..+...|.++.|..++........
T Consensus 234 ~l~p~~~~~--l~------------------------~~~~~~~~~~g~~~~a~~~~~~a~~~~p 272 (308)
T 2ond_A 234 SLPPEKSGE--IW------------------------ARFLAFESNIGDLASILKVEKRRFTAFR 272 (308)
T ss_dssp SSCGGGCHH--HH------------------------HHHHHHHHHHSCHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHH--HH------------------------HHHHHHHHHcCCHHHHHHHHHHHHHHcc
Confidence 4455666 88 8889999999999999999999876544
No 54
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.92 E-value=6.4e-09 Score=101.31 Aligned_cols=245 Identities=9% Similarity=-0.044 Sum_probs=162.1
Q ss_pred cccCCccceehhhcccCcchhhhHHHhhcCCCCcc----HHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCC-CChh
Q psy7457 28 QVINPDESRYILSRVRTPKKIEHILIQRGLSKDTI----LDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPD-SDPQ 102 (497)
Q Consensus 28 ~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n----~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~-d~~~ 102 (497)
...++++|+-+|.+++.. +|++ ...+...+.+|...|++. +|++.|++.+.. .+. .+..
T Consensus 21 ~~g~~~~A~~~~~~al~~-------------~~~~~~~~~~~~~~l~~~~~~~g~~~--~A~~~~~~al~~-~~~~~~~~ 84 (406)
T 3sf4_A 21 KSGDCRAGVSFFEAAVQV-------------GTEDLKTLSAIYSQLGNAYFYLHDYA--KALEYHHHDLTL-ARTIGDQL 84 (406)
T ss_dssp HTTCHHHHHHHHHHHHHH-------------CCSCHHHHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-HHHTTCHH
T ss_pred HhccHHHHHHHHHHHHhc-------------CcccHHHHHHHHHHHHHHHHHhcCHH--HHHHHHHHHHHH-HHhccccH
Confidence 355778888888888774 4555 468889999999999999 999999998877 432 2234
Q ss_pred hHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCC----hhHHHHHHHHHHhhcc--------------------HH
Q psy7457 103 TILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIR----PEHCNLYLEVLLELKR--------------------YE 158 (497)
Q Consensus 103 ~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~----~~~vNiLaEL~i~~k~--------------------y~ 158 (497)
....+...+|.+|...|++++|+..+++++...|..-+ ..-.+.++.+|...|+ |+
T Consensus 85 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~ 164 (406)
T 3sf4_A 85 GEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQ 164 (406)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHH
Confidence 45678899999999999999999999999998876543 2357788999999999 99
Q ss_pred HHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhcc-cc--
Q psy7457 159 TCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLASL-KF-- 235 (497)
Q Consensus 159 ~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l-~e-- 235 (497)
+|++.+.+.....- .. ++.. .-......+|.++..+|+.+.+...+... ..
T Consensus 165 ~A~~~~~~al~~~~--~~---------------------~~~~---~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 218 (406)
T 3sf4_A 165 AAVDFYEENLSLVT--AL---------------------GDRA---AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAK 218 (406)
T ss_dssp HHHHHHHHHHHHHH--HT---------------------TCHH---HHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH--hc---------------------cCcH---HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 99999887654221 00 0000 02345677888888888877766665443 11
Q ss_pred ---CcccccccchhhhhHHHHHHHH-HHHHHHHhh---------------hhhhHHHHHHHHhcccHHHHHHHHHHHhcC
Q psy7457 236 ---DVEMYGTITVYLDIAEALIQEH-YEAYAVQFK---------------ELVYLDIAEALIQEHYEAYAVQVLVLLVSS 296 (497)
Q Consensus 236 ---~~ee~~D~~Ly~~~~~~~~~~~-~~~~~~~~~---------------~~~~ldvaeAl~e~g~y~~Al~~l~~L~~~ 296 (497)
++...+. .++..+....... |+.+...|. -.++..+|.+|...|.|++|+.+|...+..
T Consensus 219 ~~~~~~~~~~--~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 296 (406)
T 3sf4_A 219 EFGDKAAERR--AYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAI 296 (406)
T ss_dssp HTTCHHHHHH--HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hcCCcHHHHH--HHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 1111122 3323333333222 444433333 115567777777777777777777665543
Q ss_pred CC-----CChHHHHHHHHHHHHHhh
Q psy7457 297 EK-----YNQPGVWKQLAETYEKSE 316 (497)
Q Consensus 297 ~~-----y~~~~vwl~lAeCy~~l~ 316 (497)
.. ...+.++..+|.||.+.+
T Consensus 297 ~~~~~~~~~~~~~~~~la~~~~~~g 321 (406)
T 3sf4_A 297 AQELNDRIGEGRACWSLGNAYTALG 321 (406)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred HHhcCCcHHHHHHHHHHHHHHHHcC
Confidence 21 123556777777777765
No 55
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=98.92 E-value=8e-09 Score=97.25 Aligned_cols=174 Identities=12% Similarity=0.051 Sum_probs=137.5
Q ss_pred CCChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCcc---HHHHHHHHHHHHHhCCcchhHH
Q psy7457 8 YENPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTI---LDNRARRLRLCDEIGLKNRGFV 84 (497)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n---~~~~~~RA~Ly~elG~~~~~~A 84 (497)
-.+|+.++..+...+. ..++++|+=+|.+++.. +|++ .+.++.++.+|.+.|++. +|
T Consensus 12 ~~~~~~~~~~a~~~~~-----~g~~~~A~~~~~~~l~~-------------~p~~~~~~~a~~~lg~~~~~~~~~~--~A 71 (261)
T 3qky_A 12 HSSPQEAFERAMEFYN-----QGKYDRAIEYFKAVFTY-------------GRTHEWAADAQFYLARAYYQNKEYL--LA 71 (261)
T ss_dssp CSSHHHHHHHHHHHHH-----TTCHHHHHHHHHHHGGG-------------CSCSTTHHHHHHHHHHHHHHTTCHH--HH
T ss_pred CCCHHHHHHHHHHHHH-----hCCHHHHHHHHHHHHHh-------------CCCCcchHHHHHHHHHHHHHhCcHH--HH
Confidence 3567888888776654 45677888888888774 6777 899999999999999999 99
Q ss_pred HHHHHHHHhccCCCCChhhHHHHHHHHHHHHHh--------cCCHHHHHHHHHHHHHHccCCCChhHH------------
Q psy7457 85 LAGYQRYLKNITPDSDPQTILDLSTRAAHVYHT--------ARNFPQAASSLAIAFQYSAHLIRPEHC------------ 144 (497)
Q Consensus 85 l~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e--------~~~~~~Ai~~le~a~~~~~~~f~~~~v------------ 144 (497)
++.|+++++. .|.++ ....+.-.+|.+|.. .|+.++|+..|++++..+|+.......
T Consensus 72 ~~~~~~~l~~-~p~~~--~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~ 148 (261)
T 3qky_A 72 ASEYERFIQI-YQIDP--RVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLA 148 (261)
T ss_dssp HHHHHHHHHH-CTTCT--THHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-CCCCc--hhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHH
Confidence 9999999999 99775 234678899999999 999999999999999999986443332
Q ss_pred ---HHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcC
Q psy7457 145 ---NLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLR 221 (497)
Q Consensus 145 ---NiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg 221 (497)
-.++.+|...|+|++|+..+++..... |++. ...+....+|.+...+|
T Consensus 149 ~~~~~la~~~~~~g~~~~A~~~~~~~l~~~--------------------------p~~~---~~~~a~~~l~~~~~~~g 199 (261)
T 3qky_A 149 RKQYEAARLYERRELYEAAAVTYEAVFDAY--------------------------PDTP---WADDALVGAMRAYIAYA 199 (261)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------------------------TTST---THHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHC--------------------------CCCc---hHHHHHHHHHHHHHHhc
Confidence 577999999999999999998866421 3332 13578889999999885
Q ss_pred CC----------CchhHHhhcc
Q psy7457 222 SE----------TQFPTLLASL 233 (497)
Q Consensus 222 ~~----------~~~~~l~~~l 233 (497)
.. +++...+..+
T Consensus 200 ~~~~~~~~~~~~~~A~~~~~~~ 221 (261)
T 3qky_A 200 EQSVRARQPERYRRAVELYERL 221 (261)
T ss_dssp HTSCGGGHHHHHHHHHHHHHHH
T ss_pred ccchhhcccchHHHHHHHHHHH
Confidence 44 4455555544
No 56
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.90 E-value=1e-08 Score=99.58 Aligned_cols=226 Identities=5% Similarity=-0.001 Sum_probs=160.7
Q ss_pred ccCCccceehhhcccCcchhhhHHHhhcCCCC-ccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCC-hhhHHH
Q psy7457 29 VINPDESRYILSRVRTPKKIEHILIQRGLSKD-TILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSD-PQTILD 106 (497)
Q Consensus 29 ~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p-~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~-~~~~~~ 106 (497)
..++++|+-||-+++.+... ..+| .-...+...+.+|.++|++. +|++.|++.++. .|... ......
T Consensus 50 ~g~~~~A~~~~~~al~~~~~--------~~~~~~~a~~~~~lg~~~~~~g~~~--~A~~~~~~Al~l-~~~~g~~~~~a~ 118 (292)
T 1qqe_A 50 RKELNLAGDSFLKAADYQKK--------AGNEDEAGNTYVEAYKCFKSGGNSV--NAVDSLENAIQI-FTHRGQFRRGAN 118 (292)
T ss_dssp TTCTHHHHHHHHHHHHHHHH--------TTCHHHHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-HHHTTCHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHH--------hCCHHHHHHHHHHHHHHHHHCCCHH--HHHHHHHHHHHH-HHHcCCHHHHHH
Confidence 57889999999999875321 1233 23678899999999999999 999999999999 77542 233456
Q ss_pred HHHHHHHHHHhc-CCHHHHHHHHHHHHHHccCCCCh----hHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCC
Q psy7457 107 LSTRAAHVYHTA-RNFPQAASSLAIAFQYSAHLIRP----EHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQD 181 (497)
Q Consensus 107 ~~k~LA~~Y~e~-~~~~~Ai~~le~a~~~~~~~f~~----~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D 181 (497)
....+|.+|... |++++|+..|++++..+|..-+. .-.+-++.+|..+|+|++|+..+++.....
T Consensus 119 ~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~---------- 188 (292)
T 1qqe_A 119 FKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSS---------- 188 (292)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT----------
T ss_pred HHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH----------
Confidence 888999999996 99999999999999998865432 346788999999999999999998866421
Q ss_pred CCCCccccccccccccCCCCCCC-CCcchhHHHHHHHhhcCCCCchhHHhhcc-ccCcccccccchhhhhHHHHHHHHHH
Q psy7457 182 STSGEESNIQITNYTVPSDPNLV-PPPEILSKFVITLVHLRSETQFPTLLASL-KFDVEMYGTITVYLDIAEALIQEHYE 259 (497)
Q Consensus 182 ~e~d~~~~~~~~~~~~p~~l~l~-lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~ 259 (497)
|+..... -..+...++|+|+..+|+.+.+...++.. ..+| ++++ -.
T Consensus 189 ----------------~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p-~~~~--~~------------- 236 (292)
T 1qqe_A 189 ----------------MGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDP-NFAD--SR------------- 236 (292)
T ss_dssp ----------------SSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC------------------------
T ss_pred ----------------hcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC-CCCC--cH-------------
Confidence 1211000 01135688999999999998888777655 3333 2222 10
Q ss_pred HHHHHhhhhhhHHHHHHHH--hcccHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHH
Q psy7457 260 AYAVQFKELVYLDIAEALI--QEHYEAYAVQVLVLLVSSEKYNQPGVWKQLAETYEK 314 (497)
Q Consensus 260 ~~~~~~~~~~~ldvaeAl~--e~g~y~~Al~~l~~L~~~~~y~~~~vwl~lAeCy~~ 314 (497)
.-..+..++.+|. +.+.+.+|+..|..+...+.. ...+++++-+.++.
T Consensus 237 ------~~~~l~~l~~~~~~~~~~~~~~A~~~~~~~~~l~~~-~~~~~~~~k~~~~~ 286 (292)
T 1qqe_A 237 ------ESNFLKSLIDAVNEGDSEQLSEHCKEFDNFMRLDKW-KITILNKIKESIQQ 286 (292)
T ss_dssp -------HHHHHHHHHHHHTTCTTTHHHHHHHHTTSSCCCHH-HHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHcCCHHHHHHHHHHhccCCccHHH-HHHHHHHHHHHhhc
Confidence 0012267778886 678899999999776665433 35677777776643
No 57
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.89 E-value=1.1e-08 Score=101.02 Aligned_cols=248 Identities=9% Similarity=-0.050 Sum_probs=161.4
Q ss_pred ccccCCccceehhhcccCcchhhhHHHhhcCCCCccH----HHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCC-CCCh
Q psy7457 27 IQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTIL----DNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITP-DSDP 101 (497)
Q Consensus 27 ~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~----~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P-~d~~ 101 (497)
....+.++|+-+|.+++.. +|++. ..+...+.+|...|++. +|++.|++.++. .. ..+.
T Consensus 59 ~~~g~~~~A~~~~~~al~~-------------~~~~~~~~~~~~~~lg~~~~~~g~~~--~A~~~~~~al~~-~~~~~~~ 122 (411)
T 4a1s_A 59 CNAGDCRAGVAFFQAAIQA-------------GTEDLRTLSAIYSQLGNAYFYLGDYN--KAMQYHKHDLTL-AKSMNDR 122 (411)
T ss_dssp HHTTCHHHHHHHHHHHHHH-------------CCSCHHHHHHHHHHHHHHHHHHTCHH--HHHHHHHHHHHH-HHHTTCH
T ss_pred HHhCcHHHHHHHHHHHHHh-------------cccChhHHHHHHHHHHHHHHHCCCHH--HHHHHHHHHHHH-HHHccCc
Confidence 3456777788777777763 55554 57889999999999999 999999999877 32 1223
Q ss_pred hhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCC----hhHHHHHHHHHHhhcc-----------------HHHH
Q psy7457 102 QTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIR----PEHCNLYLEVLLELKR-----------------YETC 160 (497)
Q Consensus 102 ~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~----~~~vNiLaEL~i~~k~-----------------y~~a 160 (497)
.....+...+|.+|...|++++|+..|++++...+...+ ..-.+.++.+|...|+ |++|
T Consensus 123 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A 202 (411)
T 4a1s_A 123 LGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRA 202 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHH
Confidence 445678899999999999999999999999998654332 2357788999999999 9999
Q ss_pred HHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhcc-ccCccc
Q psy7457 161 VEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLASL-KFDVEM 239 (497)
Q Consensus 161 l~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l-~e~~ee 239 (497)
++.+++.....-...+ +.. -......+|.++..+|+.+.+...+... ...+ +
T Consensus 203 ~~~~~~al~~~~~~~~---------------------~~~-----~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~-~ 255 (411)
T 4a1s_A 203 VEFYQENLKLMRDLGD---------------------RGA-----QGRACGNLGNTYYLLGDFQAAIEHHQERLRIAR-E 255 (411)
T ss_dssp HHHHHHHHHHHHHHTC---------------------HHH-----HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-H
T ss_pred HHHHHHHHHHHHHcCC---------------------HHH-----HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH-h
Confidence 9998775542110000 000 2346677888888888888766665444 2111 1
Q ss_pred ccc----cchhhhhHHHHHHHH-HHHHHHHhh---------------hhhhHHHHHHHHhcccHHHHHHHHHHHhcCCC-
Q psy7457 240 YGT----ITVYLDIAEALIQEH-YEAYAVQFK---------------ELVYLDIAEALIQEHYEAYAVQVLVLLVSSEK- 298 (497)
Q Consensus 240 ~~D----~~Ly~~~~~~~~~~~-~~~~~~~~~---------------~~~~ldvaeAl~e~g~y~~Al~~l~~L~~~~~- 298 (497)
.++ ...++..+...+... |+++..+|. ..++..+|.+|...|.+++|+.+|...+....
T Consensus 256 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 335 (411)
T 4a1s_A 256 FGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQE 335 (411)
T ss_dssp HTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 111 003323333333222 444444443 12556777777777777777777776554321
Q ss_pred ----CChHHHHHHHHHHHHHhhh
Q psy7457 299 ----YNQPGVWKQLAETYEKSEC 317 (497)
Q Consensus 299 ----y~~~~vwl~lAeCy~~l~~ 317 (497)
.....++..+|.||.+++.
T Consensus 336 ~~~~~~~~~~~~~la~~~~~~g~ 358 (411)
T 4a1s_A 336 LGDRIGEARACWSLGNAHSAIGG 358 (411)
T ss_dssp HTCHHHHHHHHHHHHHHHHHTTC
T ss_pred CCChHHHHHHHHHHHHHHHHhcc
Confidence 1234466777777776553
No 58
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=98.88 E-value=6.6e-09 Score=108.71 Aligned_cols=177 Identities=9% Similarity=-0.024 Sum_probs=148.7
Q ss_pred hhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhc--------
Q psy7457 47 KIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTA-------- 118 (497)
Q Consensus 47 ~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~-------- 118 (497)
+...++.+|...+|++.+.+...+.+|.+.|++. +|++.|++.++. .|. . .+...+|.+|...
T Consensus 121 ~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~--~A~~~~~~al~~-~p~-~-----~~~~~lg~~~~~~~~~~~~~~ 191 (474)
T 4abn_A 121 EAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVT--SAHTCFSGALTH-CKN-K-----VSLQNLSMVLRQLQTDSGDEH 191 (474)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHH--HHHHHHHHHHTT-CCC-H-----HHHHHHHHHHTTCCCSCHHHH
T ss_pred HHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHH--HHHHHHHHHHhh-CCC-H-----HHHHHHHHHHHHhccCChhhh
Confidence 3444556666679999999999999999999999 999999999999 876 2 6889999999999
Q ss_pred -CCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhh--------ccHHHHHHHHHHhchheeeeccCCCCCCCCCcccc
Q psy7457 119 -RNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLEL--------KRYETCVEVLRRFANIEITYFKLFPQDSTSGEESN 189 (497)
Q Consensus 119 -~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~--------k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~ 189 (497)
|++++|++.|+++++..|.. ..-.+.++.+|..+ ++|++|++.+++.....
T Consensus 192 ~g~~~~A~~~~~~al~~~p~~--~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~------------------ 251 (474)
T 4abn_A 192 SRHVMDSVRQAKLAVQMDVLD--GRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVD------------------ 251 (474)
T ss_dssp HHHHHHHHHHHHHHHHHCTTC--HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHC------------------
T ss_pred hhhHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhC------------------
Confidence 99999999999999999964 56788899999999 99999999999877521
Q ss_pred ccccccccC---CCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhcc-ccCcccccccchhhhhHHHHHHHHHHHHHHHh
Q psy7457 190 IQITNYTVP---SDPNLVPPPEILSKFVITLVHLRSETQFPTLLASL-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQF 265 (497)
Q Consensus 190 ~~~~~~~~p---~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~ 265 (497)
| . -.+....+|.++..+|+.+++...+... ..+|. ..+ .+
T Consensus 252 --------p~~~~------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~-~~~--a~------------------- 295 (474)
T 4abn_A 252 --------RKASS------NPDLHLNRATLHKYEESYGEALEGFSQAAALDPA-WPE--PQ------------------- 295 (474)
T ss_dssp --------GGGGG------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHH--HH-------------------
T ss_pred --------CCccc------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHH--HH-------------------
Confidence 2 2 3578899999999999999988887666 54443 344 66
Q ss_pred hhhhhHHHHHHHHhcccHHHHHHHHHHH
Q psy7457 266 KELVYLDIAEALIQEHYEAYAVQVLVLL 293 (497)
Q Consensus 266 ~~~~~ldvaeAl~e~g~y~~Al~~l~~L 293 (497)
..+|.++...|.+.+|++.+..+
T Consensus 296 -----~~l~~~~~~lg~~~eAi~~~~~~ 318 (474)
T 4abn_A 296 -----QREQQLLEFLSRLTSLLESKGKT 318 (474)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHTTTC
T ss_pred -----HHHHHHHHHHHHHHHHHHHhccc
Confidence 89999999999999999876443
No 59
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=98.87 E-value=3.1e-08 Score=108.61 Aligned_cols=185 Identities=10% Similarity=-0.032 Sum_probs=154.0
Q ss_pred CCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHH--------hccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHH
Q psy7457 57 LSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYL--------KNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSL 128 (497)
Q Consensus 57 ~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il--------~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~l 128 (497)
..||+|....+-++ ...|++. +|++.|++.+ +. .|.+. ++...+|..|.+.|++++|++.|
T Consensus 388 ~~~p~~~~a~~~~a---~~~~~~~--~A~~~~~~al~~~~~~~~~~-~p~~~-----~~~~~~a~~~~~~g~~~~A~~~~ 456 (681)
T 2pzi_A 388 LVDPTDVAASVLQA---TVLSQPV--QTLDSLRAARHGALDADGVD-FSESV-----ELPLMEVRALLDLGDVAKATRKL 456 (681)
T ss_dssp CCCTTSTTHHHHHH---TTTCCHH--HHHHHHHHHHTC-------C-CTTCS-----HHHHHHHHHHHHHTCHHHHHHHH
T ss_pred cCCCCCcchHHhhc---ccccCHH--HHHHHHHHhhhhcccccccc-cccch-----hHHHHHHHHHHhcCCHHHHHHHH
Confidence 56888888888777 7789999 9999999999 77 78876 68889999999999999999999
Q ss_pred HHHHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcc
Q psy7457 129 AIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPE 208 (497)
Q Consensus 129 e~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiD 208 (497)
+++++..|+. +.-.+.++.+|..+|+|++|++.+++....- |++ .+
T Consensus 457 ~~al~~~p~~--~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~--------------------------P~~------~~ 502 (681)
T 2pzi_A 457 DDLAERVGWR--WRLVWYRAVAELLTGDYDSATKHFTEVLDTF--------------------------PGE------LA 502 (681)
T ss_dssp HHHHHHHCCC--HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS--------------------------TTC------SH
T ss_pred HHHhccCcch--HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------------------------CCC------hH
Confidence 9999999965 7889999999999999999999998876421 443 46
Q ss_pred hhHHHHHHHhhcCCCCchhHHhhcc-ccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHH
Q psy7457 209 ILSKFVITLVHLRSETQFPTLLASL-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAV 287 (497)
Q Consensus 209 Lr~KLgI~ll~Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al 287 (497)
...-+|.++..+|+.++ ...++.. ..+| +..+ .+ +..|.+|...|+|++|+
T Consensus 503 ~~~~lg~~~~~~g~~~~-~~~~~~al~~~P-~~~~--a~------------------------~~lg~~~~~~g~~~~A~ 554 (681)
T 2pzi_A 503 PKLALAATAELAGNTDE-HKFYQTVWSTND-GVIS--AA------------------------FGLARARSAEGDRVGAV 554 (681)
T ss_dssp HHHHHHHHHHHHTCCCT-TCHHHHHHHHCT-TCHH--HH------------------------HHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHcCChHH-HHHHHHHHHhCC-chHH--HH------------------------HHHHHHHHHcCCHHHHH
Confidence 78899999999999988 7777666 5555 3344 67 99999999999999999
Q ss_pred HHHHHHhcCCCCChHHHHHHHHHHHHHh
Q psy7457 288 QVLVLLVSSEKYNQPGVWKQLAETYEKS 315 (497)
Q Consensus 288 ~~l~~L~~~~~y~~~~vwl~lAeCy~~l 315 (497)
..|...+.....+ +..|..+|.+|...
T Consensus 555 ~~~~~al~l~P~~-~~a~~~~~~~~~~~ 581 (681)
T 2pzi_A 555 RTLDEVPPTSRHF-TTARLTSAVTLLSG 581 (681)
T ss_dssp HHHHTSCTTSTTH-HHHHHHHHHHTC--
T ss_pred HHHHhhcccCccc-HHHHHHHHHHHHcc
Confidence 9999988876654 44589999998543
No 60
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.85 E-value=8.8e-09 Score=100.33 Aligned_cols=253 Identities=8% Similarity=-0.067 Sum_probs=180.5
Q ss_pred cccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCC-hhhHHH
Q psy7457 28 QVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSD-PQTILD 106 (497)
Q Consensus 28 ~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~-~~~~~~ 106 (497)
...++++|+-+|-+++.. .....++|.....+...+.+|...|++. +|++.|++.++. .|... ......
T Consensus 59 ~~g~~~~A~~~~~~al~~-------~~~~~~~~~~~~~~~~la~~~~~~g~~~--~A~~~~~~al~~-~~~~~~~~~~~~ 128 (406)
T 3sf4_A 59 YLHDYAKALEYHHHDLTL-------ARTIGDQLGEAKASGNLGNTLKVLGNFD--EAIVCCQRHLDI-SRELNDKVGEAR 128 (406)
T ss_dssp HTTCHHHHHHHHHHHHHH-------HHHTTCHHHHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-HHHHTCHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHH-------HHhccccHHHHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHH-HHhcccccchHH
Confidence 455677777777777653 2223456677889999999999999999 999999999998 66532 334456
Q ss_pred HHHHHHHHHHhcCC--------------------HHHHHHHHHHHHHHccCCCCh----hHHHHHHHHHHhhccHHHHHH
Q psy7457 107 LSTRAAHVYHTARN--------------------FPQAASSLAIAFQYSAHLIRP----EHCNLYLEVLLELKRYETCVE 162 (497)
Q Consensus 107 ~~k~LA~~Y~e~~~--------------------~~~Ai~~le~a~~~~~~~f~~----~~vNiLaEL~i~~k~y~~al~ 162 (497)
+...+|.+|...|+ +++|++.++.++...+..-+. .-.+.++.+|...|+|++|++
T Consensus 129 ~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 208 (406)
T 3sf4_A 129 ALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVI 208 (406)
T ss_dssp HHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTBHHHHHH
T ss_pred HHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHccCHHHHHH
Confidence 88899999999999 999999999998876544322 347788999999999999999
Q ss_pred HHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhcc-cc-----C
Q psy7457 163 VLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLASL-KF-----D 236 (497)
Q Consensus 163 ~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l-~e-----~ 236 (497)
.+++.....- +. ++.. .-......+|.++..+|+.+.+...+... .. +
T Consensus 209 ~~~~al~~~~--~~---------------------~~~~---~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 262 (406)
T 3sf4_A 209 AHEQRLLIAK--EF---------------------GDKA---AERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKD 262 (406)
T ss_dssp HHHHHHHHHH--HT---------------------TCHH---HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHH--hc---------------------CCcH---HHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcC
Confidence 9988664321 00 0100 02346778888999999988876665443 21 1
Q ss_pred cccccccchhhhhHHHHHHHH-HHHHHHHhh---------------hhhhHHHHHHHHhcccHHHHHHHHHHHhcCCC--
Q psy7457 237 VEMYGTITVYLDIAEALIQEH-YEAYAVQFK---------------ELVYLDIAEALIQEHYEAYAVQVLVLLVSSEK-- 298 (497)
Q Consensus 237 ~ee~~D~~Ly~~~~~~~~~~~-~~~~~~~~~---------------~~~~ldvaeAl~e~g~y~~Al~~l~~L~~~~~-- 298 (497)
....+. .++..+....... |+.+...|. -.++..+|.+|...|++.+|+.+|...+....
T Consensus 263 ~~~~~~--~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 340 (406)
T 3sf4_A 263 RAVEAQ--SCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISREV 340 (406)
T ss_dssp HHHHHH--HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT
T ss_pred chHHHH--HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 111233 4445555555443 666655555 12678999999999999999999988665422
Q ss_pred ---CChHHHHHHHHHHHHHhhhc
Q psy7457 299 ---YNQPGVWKQLAETYEKSECL 318 (497)
Q Consensus 299 ---y~~~~vwl~lAeCy~~l~~l 318 (497)
.....++..+|++|..++.-
T Consensus 341 ~~~~~~~~~~~~l~~~~~~~g~~ 363 (406)
T 3sf4_A 341 GDKSGELTARLNLSDLQMVLGLS 363 (406)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHTT
T ss_pred cCCcchhHHHHHHHHHHHHhhHh
Confidence 23466889999999998844
No 61
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=98.84 E-value=5.8e-09 Score=95.75 Aligned_cols=137 Identities=9% Similarity=-0.072 Sum_probs=116.7
Q ss_pred CCCChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCC-ccHHHHHHHHHHHHHhCCcchhHHH
Q psy7457 7 SYENPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKD-TILDNRARRLRLCDEIGLKNRGFVL 85 (497)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p-~n~~~~~~RA~Ly~elG~~~~~~Al 85 (497)
.-.+|+.|+..++..+.+ .+.++|+=+|.+++.. +| .+...++.++.+|..+|++. +|+
T Consensus 3 ~~~~~~~~~~~g~~~~~~-----~~~~~A~~~~~~al~~-------------~~~~~~~~~~~~~~~~~~~~~~~--~A~ 62 (228)
T 4i17_A 3 QTTDPNQLKNEGNDALNA-----KNYAVAFEKYSEYLKL-------------TNNQDSVTAYNCGVCADNIKKYK--EAA 62 (228)
T ss_dssp -CCCHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHH-------------TTTCCHHHHHHHHHHHHHTTCHH--HHH
T ss_pred cccCHHHHHHHHHHHHHc-----cCHHHHHHHHHHHHhc-------------cCCCCcHHHHHHHHHHHHhhcHH--HHH
Confidence 335899999888776644 5678888888888874 44 77888999999999999999 999
Q ss_pred HHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCCh-----hHHHHHHHHHHhhccHHHH
Q psy7457 86 AGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRP-----EHCNLYLEVLLELKRYETC 160 (497)
Q Consensus 86 ~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~-----~~vNiLaEL~i~~k~y~~a 160 (497)
+.|++.++. .|.+. .+...+|.+|...|+.++|++.|++++...|+.... .-...+..++...|+|++|
T Consensus 63 ~~~~~al~~-~p~~~-----~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A 136 (228)
T 4i17_A 63 DYFDIAIKK-NYNLA-----NAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKA 136 (228)
T ss_dssp HHHHHHHHT-TCSHH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHh-CcchH-----HHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHH
Confidence 999999999 88764 688899999999999999999999999999976433 4467788889999999999
Q ss_pred HHHHHHhch
Q psy7457 161 VEVLRRFAN 169 (497)
Q Consensus 161 l~~I~~~~~ 169 (497)
++.+++...
T Consensus 137 ~~~~~~al~ 145 (228)
T 4i17_A 137 EENYKHATD 145 (228)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHh
Confidence 999988764
No 62
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.83 E-value=1.4e-07 Score=87.64 Aligned_cols=178 Identities=6% Similarity=-0.044 Sum_probs=129.5
Q ss_pred cHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCCh
Q psy7457 62 ILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRP 141 (497)
Q Consensus 62 n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~ 141 (497)
+.+.++.++..+.+.|++. +|++.|+++++. .|.++. ..++.-.+|..|...|+.++|++.|+++++.+|+...-
T Consensus 3 ~~~~~~~~a~~~~~~g~~~--~A~~~~~~~~~~-~p~~~~--~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~ 77 (225)
T 2yhc_A 3 PPNEIYATAQQKLQDGNWR--QAITQLEALDNR-YPFGPY--SQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNI 77 (225)
T ss_dssp CHHHHHHHHHHHHHHTCHH--HHHHHHHHHHHH-CTTSTT--HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTH
T ss_pred CHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHh-CCCChH--HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcH
Confidence 3678899999999999999 999999999999 997752 23577889999999999999999999999999987543
Q ss_pred h-HHHHHHHHHHh------------------hccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCC
Q psy7457 142 E-HCNLYLEVLLE------------------LKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPN 202 (497)
Q Consensus 142 ~-~vNiLaEL~i~------------------~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~ 202 (497)
. ..-.++..+.. .|++++|+..+++.... .|++.
T Consensus 78 ~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~--------------------------~P~~~- 130 (225)
T 2yhc_A 78 DYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRG--------------------------YPNSQ- 130 (225)
T ss_dssp HHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTT--------------------------CTTCT-
T ss_pred HHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHH--------------------------CcCCh-
Confidence 2 24444555543 57899999988876641 13332
Q ss_pred CCCCcchh--------------HHHHHHHhhcCCCCchhHHhhcc-ccCccc--ccccchhhhhHHHHHHHHHHHHHHHh
Q psy7457 203 LVPPPEIL--------------SKFVITLVHLRSETQFPTLLASL-KFDVEM--YGTITVYLDIAEALIQEHYEAYAVQF 265 (497)
Q Consensus 203 l~lPiDLr--------------~KLgI~ll~Lg~~~~~~~l~~~l-~e~~ee--~~D~~Ly~~~~~~~~~~~~~~~~~~~ 265 (497)
...+.+ ..+|.+++..|+...+...++.+ ...|.. ..+ .+
T Consensus 131 --~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~--a~------------------- 187 (225)
T 2yhc_A 131 --YTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRD--AL------------------- 187 (225)
T ss_dssp --THHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHH--HH-------------------
T ss_pred --hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHH--HH-------------------
Confidence 022233 23455566666666655555554 333321 123 44
Q ss_pred hhhhhHHHHHHHHhcccHHHHHHHHHHHhcCCCC
Q psy7457 266 KELVYLDIAEALIQEHYEAYAVQVLVLLVSSEKY 299 (497)
Q Consensus 266 ~~~~~ldvaeAl~e~g~y~~Al~~l~~L~~~~~y 299 (497)
+-+|.+|.+.|.+++|+..|..|.....-
T Consensus 188 -----~~l~~~~~~~g~~~~A~~~~~~l~~~~~~ 216 (225)
T 2yhc_A 188 -----PLMENAYRQMQMNAQAEKVAKIIAANSSN 216 (225)
T ss_dssp -----HHHHHHHHHTTCHHHHHHHHHHHHHCCSC
T ss_pred -----HHHHHHHHHcCCcHHHHHHHHHHHhhCCC
Confidence 88999999999999999999998876553
No 63
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.82 E-value=1.9e-08 Score=94.23 Aligned_cols=232 Identities=10% Similarity=-0.006 Sum_probs=155.5
Q ss_pred cccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccC-----CCCChh
Q psy7457 28 QVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNIT-----PDSDPQ 102 (497)
Q Consensus 28 ~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~-----P~d~~~ 102 (497)
...++++|+-+|.+++.... ...+.++|.....+...+.+|...|++. +|++.|++.++. . +.+ .
T Consensus 39 ~~g~~~~A~~~~~~a~~~~~-----~~~~~~~~~~~~~~~~la~~~~~~g~~~--~A~~~~~~al~~-~~~~~~~~~--~ 108 (311)
T 3nf1_A 39 SQGRYEVAVPLCKQALEDLE-----KTSGHDHPDVATMLNILALVYRDQNKYK--DAANLLNDALAI-REKTLGKDH--P 108 (311)
T ss_dssp HTTCHHHHHHHHHHHHHHHH-----HHHCSSSHHHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-HHHHHCTTC--H
T ss_pred HcCCHHHHHHHHHHHHHHHH-----HHcCCCCHHHHHHHHHHHHHHHHCCCHH--HHHHHHHHHHHH-HHHHhCCCC--h
Confidence 45678889999988887321 1122357788999999999999999999 999999999987 5 322 2
Q ss_pred hHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHc-----cCC-CChhHHHHHHHHHHhhccHHHHHHHHHHhchheeeecc
Q psy7457 103 TILDLSTRAAHVYHTARNFPQAASSLAIAFQYS-----AHL-IRPEHCNLYLEVLLELKRYETCVEVLRRFANIEITYFK 176 (497)
Q Consensus 103 ~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~-----~~~-f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~ 176 (497)
....+...+|.+|...|+.++|+..++.+++.. ++. ....-.+.++.++...|+|++|++.+++...... . .
T Consensus 109 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~-~-~ 186 (311)
T 3nf1_A 109 AVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQ-T-K 186 (311)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH-H-T
T ss_pred HHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-H-H
Confidence 345788899999999999999999999999976 221 1224477889999999999999999988765321 0 0
Q ss_pred CCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhcc-ccCcc--------cccccchhh
Q psy7457 177 LFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLASL-KFDVE--------MYGTITVYL 247 (497)
Q Consensus 177 ~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l-~e~~e--------e~~D~~Ly~ 247 (497)
. +.+. ..-......+|.++.++|+.+++...+... ...++ .... +++
T Consensus 187 ~--------------------~~~~--~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~--~~~ 242 (311)
T 3nf1_A 187 L--------------------GPDD--PNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKP--IWM 242 (311)
T ss_dssp S--------------------CTTC--HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHC------CC--HHH
T ss_pred h--------------------CCCC--HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCCcchHH--HHH
Confidence 0 0111 002456778899999999988877776544 21111 1111 110
Q ss_pred hhHHHHHHHH-------HHHHHHHhh---------hhhhHHHHHHHHhcccHHHHHHHHHHHhc
Q psy7457 248 DIAEALIQEH-------YEAYAVQFK---------ELVYLDIAEALIQEHYEAYAVQVLVLLVS 295 (497)
Q Consensus 248 ~~~~~~~~~~-------~~~~~~~~~---------~~~~ldvaeAl~e~g~y~~Al~~l~~L~~ 295 (497)
.......... |..+...|. -.++..+|.+|...|+|++|+.+|...+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 306 (311)
T 3nf1_A 243 HAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMR 306 (311)
T ss_dssp HHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 0000000000 111111111 23678999999999999999999987654
No 64
>2gq1_A Fructose-1,6-bisphosphatase; allosteric activator site, quaternary conformation, hydrolas; 1.45A {Escherichia coli} PDB: 2owz_A* 2ox3_A* 2q8m_A* 2qvr_A*
Probab=98.82 E-value=2.6e-09 Score=109.25 Aligned_cols=88 Identities=19% Similarity=0.210 Sum_probs=56.9
Q ss_pred chhHHHHHhhhcCCCCccc--cccc------------------ccccccccCcCCcchhhhhhhhhhhHHHHHHhccccC
Q psy7457 407 RIVRNTLRTFQSKPNNLGL--NVMY------------------ANNCNLTSNVNVQGEEVKKLDVLSNELFVNMLTSSYS 466 (497)
Q Consensus 407 TL~rfLl~~~~~~p~~~~~--~LL~------------------~~~~g~aGs~N~~GE~QkkLDV~Anelf~~aL~~s~~ 466 (497)
||+||+++++.++|..+++ .+++ .+..|.+|+.|++||.|+++|+.++++|+++|++++.
T Consensus 3 tl~~~~~~~~~~~~~~~~~l~~ll~~~~~a~k~i~~~v~~~~l~~~~g~~~~~n~~gd~vt~~D~~ae~~i~~~L~~~~p 82 (332)
T 2gq1_A 3 TLGEFIVEKQHEFSHATGELTALLSAIKLGAKIIHRDINKAGLVDILGASGAENVQGEVQQKLDLFANEKLKAALKARDI 82 (332)
T ss_dssp BHHHHHHHTTTTGGGCHHHHHHHHHHHHHHHHHHHHHHCC----------------------HHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCCccHHHHHHHHHHHHHHHHHHhhCC
Confidence 8999999988877765554 4444 1234677889999999999999999999999999999
Q ss_pred eeEEecCCCCceeecCCCCCCCCCeEEEec
Q psy7457 467 TCLLVSEENETALEIHHQEASTGDPCVRLD 496 (497)
Q Consensus 467 Va~~aSEE~e~~i~v~~~~~~~G~Y~V~fD 496 (497)
+++++|||.+.++.+++ ...|+|+++||
T Consensus 83 ~~~i~sEE~~~~~~~~~--~~~~~~~wiiD 110 (332)
T 2gq1_A 83 VAGIASEEEDEIVVFEG--CEHAKYVVLMD 110 (332)
T ss_dssp EEEEEETTCSSCEECTT--CTTCCEEEEEE
T ss_pred CCEEEeCCCCCCcCCCC--CCCCCEEEEEe
Confidence 99999999988766553 11278999998
No 65
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=98.81 E-value=8.5e-08 Score=82.43 Aligned_cols=163 Identities=10% Similarity=0.031 Sum_probs=133.4
Q ss_pred hHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHH
Q psy7457 11 PQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQR 90 (497)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~ 90 (497)
...|+.+++... ...++++|+-+|.+++.. +|++...+...+.+|...|++. +|++.|++
T Consensus 8 ~~~~~~~~~~~~-----~~~~~~~A~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~--~A~~~~~~ 67 (186)
T 3as5_A 8 QVYYRDKGISHA-----KAGRYSQAVMLLEQVYDA-------------DAFDVDVALHLGIAYVKTGAVD--RGTELLER 67 (186)
T ss_dssp HHHHHHHHHHHH-----HHTCHHHHHHHHTTTCCT-------------TSCCHHHHHHHHHHHHHTTCHH--HHHHHHHH
T ss_pred hHHHHHHHHHHH-----HhcCHHHHHHHHHHHHHh-------------CccChHHHHHHHHHHHHcCCHH--HHHHHHHH
Confidence 344555554443 345677888888887763 7788999999999999999999 99999999
Q ss_pred HHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhchh
Q psy7457 91 YLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFANI 170 (497)
Q Consensus 91 il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~~ 170 (497)
+++. .|.+. .+...+|..|...|+.++|++.++.++..+|+. ..-...++.++...|+|++|++.+++....
T Consensus 68 ~~~~-~~~~~-----~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~--~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 139 (186)
T 3as5_A 68 SLAD-APDNV-----KVATVLGLTYVQVQKYDLAVPLLIKVAEANPIN--FNVRFRLGVALDNLGRFDEAIDSFKIALGL 139 (186)
T ss_dssp HHHH-CTTCH-----HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC--HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHhc-CCCCH-----HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHh--HHHHHHHHHHHHHcCcHHHHHHHHHHHHhc
Confidence 9999 88774 677899999999999999999999999998864 566788999999999999999999886642
Q ss_pred eeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhcc
Q psy7457 171 EITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLASL 233 (497)
Q Consensus 171 ~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l 233 (497)
. |. .......+|.++..+|+.+.+...+...
T Consensus 140 ~--------------------------~~------~~~~~~~la~~~~~~~~~~~A~~~~~~~ 170 (186)
T 3as5_A 140 R--------------------------PN------EGKVHRAIAFSYEQMGRHEEALPHFKKA 170 (186)
T ss_dssp C--------------------------TT------CHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred C--------------------------cc------chHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 1 22 3467788999999999988877776655
No 66
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=98.80 E-value=6.3e-08 Score=89.31 Aligned_cols=173 Identities=10% Similarity=0.011 Sum_probs=130.9
Q ss_pred cHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHH-----------HHHHHHHHHHHhcCCHHHHHHHHHH
Q psy7457 62 ILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTIL-----------DLSTRAAHVYHTARNFPQAASSLAI 130 (497)
Q Consensus 62 n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~-----------~~~k~LA~~Y~e~~~~~~Ai~~le~ 130 (497)
..+.++.++..+.+.|++. +|++.|+++++. .|.+..-++. .+...+|.+|...|++++|+..|++
T Consensus 3 ~~~~~~~~g~~~~~~g~~~--~A~~~~~~al~~-~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 79 (208)
T 3urz_A 3 SVDEMLQKVSAAIEAGQNG--QAVSYFRQTIAL-NIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKE 79 (208)
T ss_dssp CHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-CHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHH--HHHHHHHHHHHh-CCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 4788999999999999999 999999999999 8876411111 1222399999999999999999999
Q ss_pred HHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchh
Q psy7457 131 AFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEIL 210 (497)
Q Consensus 131 a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr 210 (497)
++...|+. ..-...++.+|...|+|++|+..+++....- |++ .+..
T Consensus 80 al~~~p~~--~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~--------------------------P~~------~~a~ 125 (208)
T 3urz_A 80 LLQKAPNN--VDCLEACAEMQVCRGQEKDALRMYEKILQLE--------------------------ADN------LAAN 125 (208)
T ss_dssp HHHHCTTC--HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--------------------------TTC------HHHH
T ss_pred HHHHCCCC--HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC--------------------------CCC------HHHH
Confidence 99999975 5678899999999999999999998876421 443 4677
Q ss_pred HHHHHHHhhcCCCCc--hhHHhhcc-ccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHH
Q psy7457 211 SKFVITLVHLRSETQ--FPTLLASL-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAV 287 (497)
Q Consensus 211 ~KLgI~ll~Lg~~~~--~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al 287 (497)
..+|.++...|..+. +...+..+ ..++.. . -+ +..|.++...|.|++|+
T Consensus 126 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--a~------------------------~~~g~~~~~~~~~~~A~ 177 (208)
T 3urz_A 126 IFLGNYYYLTAEQEKKKLETDYKKLSSPTKMQ--Y--AR------------------------YRDGLSKLFTTRYEKAR 177 (208)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC---CCCHHH--H--HH------------------------HHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhCCCchh--H--HH------------------------HHHHHHHHHccCHHHHH
Confidence 888888776664332 22223222 222111 1 12 56799999999999999
Q ss_pred HHHHHHhcCCCC
Q psy7457 288 QVLVLLVSSEKY 299 (497)
Q Consensus 288 ~~l~~L~~~~~y 299 (497)
..|...+....-
T Consensus 178 ~~~~~al~l~P~ 189 (208)
T 3urz_A 178 NSLQKVILRFPS 189 (208)
T ss_dssp HHHHHHTTTSCC
T ss_pred HHHHHHHHhCCC
Confidence 999999887653
No 67
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.79 E-value=4.6e-08 Score=96.63 Aligned_cols=226 Identities=10% Similarity=-0.006 Sum_probs=153.9
Q ss_pred CCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCC
Q psy7457 59 KDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHL 138 (497)
Q Consensus 59 ~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~ 138 (497)
+|.....++.++..+...|++. +|++.|+++++. .|.+. .....+...+|.+|...|++++|+..+++++......
T Consensus 44 ~~~~~~~l~~~g~~~~~~g~~~--~A~~~~~~al~~-~~~~~-~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 119 (411)
T 4a1s_A 44 GSSMCLELALEGERLCNAGDCR--AGVAFFQAAIQA-GTEDL-RTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSM 119 (411)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-CCSCH-HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHhCcHH--HHHHHHHHHHHh-cccCh-hHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc
Confidence 3566888899999999999999 999999999999 88763 4455688999999999999999999999999976433
Q ss_pred CC----hhHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHH
Q psy7457 139 IR----PEHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFV 214 (497)
Q Consensus 139 f~----~~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLg 214 (497)
-+ ..-.+.++.+|...|+|++|++.+.+.....-...+ .|. -......+|
T Consensus 120 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~--------------------~~~------~~~~~~~l~ 173 (411)
T 4a1s_A 120 NDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGD--------------------RLS------EGRALYNLG 173 (411)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC--------------------HHH------HHHHHHHHH
T ss_pred cCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhc--------------------hHH------HHHHHHHHH
Confidence 22 244788999999999999999999886643210000 011 245677888
Q ss_pred HHHhhcCC-----------------CCchhHHhhcc-c-----cCcccccccchhhhhHHHHHHHH-HHHHHHHhhh---
Q psy7457 215 ITLVHLRS-----------------ETQFPTLLASL-K-----FDVEMYGTITVYLDIAEALIQEH-YEAYAVQFKE--- 267 (497)
Q Consensus 215 I~ll~Lg~-----------------~~~~~~l~~~l-~-----e~~ee~~D~~Ly~~~~~~~~~~~-~~~~~~~~~~--- 267 (497)
.++..+|+ .+.+...+... . .+....+. .++..+....... |+++..+|.+
T Consensus 174 ~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~~~~~--~~~~la~~~~~~g~~~~A~~~~~~al~ 251 (411)
T 4a1s_A 174 NVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDLGDRGAQGR--ACGNLGNTYYLLGDFQAAIEHHQERLR 251 (411)
T ss_dssp HHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHH--HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHcCCHHHHHH--HHHHHHHHHHHcCChHHHHHHHHHHHH
Confidence 88888888 55544443322 1 11122222 3433343333333 5555554441
Q ss_pred ------------hhhHHHHHHHHhcccHHHHHHHHHHHhcCCC-----CChHHHHHHHHHHHHHhh
Q psy7457 268 ------------LVYLDIAEALIQEHYEAYAVQVLVLLVSSEK-----YNQPGVWKQLAETYEKSE 316 (497)
Q Consensus 268 ------------~~~ldvaeAl~e~g~y~~Al~~l~~L~~~~~-----y~~~~vwl~lAeCy~~l~ 316 (497)
..+..+|.+|...|.|++|+.+|...+.... .....+|..+|.||.+.+
T Consensus 252 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g 317 (411)
T 4a1s_A 252 IAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTLLH 317 (411)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC
Confidence 1567777778888888888777766554322 123456777777777665
No 68
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.78 E-value=4.2e-08 Score=109.42 Aligned_cols=166 Identities=11% Similarity=0.123 Sum_probs=143.4
Q ss_pred CCChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHH
Q psy7457 8 YENPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAG 87 (497)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~ 87 (497)
=.+|+.|..+++....+ .+.++|+=+|.|++.. +|++...+..++.+|.++|++. +|++.
T Consensus 6 P~~a~al~nLG~~~~~~-----G~~~eAi~~~~kAl~l-------------~P~~~~a~~nLg~~l~~~g~~~--eA~~~ 65 (723)
T 4gyw_A 6 PTHADSLNNLANIKREQ-----GNIEEAVRLYRKALEV-------------FPEFAAAHSNLASVLQQQGKLQ--EALMH 65 (723)
T ss_dssp CHHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHH-------------CSCCHHHHHHHHHHHHHTTCHH--HHHHH
T ss_pred CCcHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHh-------------CCCCHHHHHHHHHHHHHcCCHH--HHHHH
Confidence 35678888888877654 4677888888888875 8999999999999999999999 99999
Q ss_pred HHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHh
Q psy7457 88 YQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRF 167 (497)
Q Consensus 88 y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~ 167 (497)
|++.++. .|.+. ++...+|.+|.++|+.++|++.|+++++..|+. .+-.+-|+.+|..+|+|++|++..++.
T Consensus 66 ~~~Al~l-~P~~~-----~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~--~~a~~~Lg~~~~~~g~~~eAi~~~~~A 137 (723)
T 4gyw_A 66 YKEAIRI-SPTFA-----DAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF--ADAHSNLASIHKDSGNIPEAIASYRTA 137 (723)
T ss_dssp HHHHHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--HHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHh-CCCCH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 9999999 89874 788999999999999999999999999999975 566888999999999999999999887
Q ss_pred chheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhcc
Q psy7457 168 ANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLASL 233 (497)
Q Consensus 168 ~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l 233 (497)
.... |+. .+....||.++..+|+.+.+...+..+
T Consensus 138 l~l~--------------------------P~~------~~a~~~L~~~l~~~g~~~~A~~~~~ka 171 (723)
T 4gyw_A 138 LKLK--------------------------PDF------PDAYCNLAHCLQIVCDWTDYDERMKKL 171 (723)
T ss_dssp HHHC--------------------------SCC------HHHHHHHHHHHHHTTCCTTHHHHHHHH
T ss_pred HHhC--------------------------CCC------hHHHhhhhhHHHhcccHHHHHHHHHHH
Confidence 6421 443 478899999999999999977766544
No 69
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.77 E-value=6.3e-09 Score=92.97 Aligned_cols=170 Identities=12% Similarity=0.008 Sum_probs=127.3
Q ss_pred CCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccC
Q psy7457 58 SKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAH 137 (497)
Q Consensus 58 ~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~ 137 (497)
|+|..++....++..+.+.|++. +|+..|+++++. .|.+. .+...+|.+|...|+.++|+..+++++...|
T Consensus 1 ~~~~~~~~~~~~a~~~~~~g~~~--~A~~~~~~al~~-~P~~~-----~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p- 71 (176)
T 2r5s_A 1 SNASPDEQLLKQVSELLQQGEHA--QALNVIQTLSDE-LQSRG-----DVKLAKADCLLETKQFELAQELLATIPLEYQ- 71 (176)
T ss_dssp -----CTTHHHHHHHHHHTTCHH--HHHHHHHTSCHH-HHTSH-----HHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-
T ss_pred CCCCHHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHH-CCCcH-----HHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-
Confidence 56777889999999999999999 999999999999 89885 6888999999999999999999999998888
Q ss_pred CCChhHHHHHHHHHH-hhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHH
Q psy7457 138 LIRPEHCNLYLEVLL-ELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVIT 216 (497)
Q Consensus 138 ~f~~~~vNiLaEL~i-~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ 216 (497)
. ..-.++++.+.. ..+...+++..+++.... -|+ ..+.+..+|.+
T Consensus 72 ~--~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~--------------------------~P~------~~~~~~~la~~ 117 (176)
T 2r5s_A 72 D--NSYKSLIAKLELHQQAAESPELKRLEQELAA--------------------------NPD------NFELACELAVQ 117 (176)
T ss_dssp C--HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHH--------------------------STT------CHHHHHHHHHH
T ss_pred C--hHHHHHHHHHHHHhhcccchHHHHHHHHHHh--------------------------CCC------CHHHHHHHHHH
Confidence 2 333333333322 222333456666554431 144 34789999999
Q ss_pred HhhcCCCCchhHHhhcc-ccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHHHHHHHHhc
Q psy7457 217 LVHLRSETQFPTLLASL-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAVQVLVLLVS 295 (497)
Q Consensus 217 ll~Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al~~l~~L~~ 295 (497)
+..+|+.+++...+... ..+|. +.+.+.+ ..+|.+|...|.+++|+..|...+.
T Consensus 118 ~~~~g~~~~A~~~~~~~l~~~p~-~~~~~a~------------------------~~l~~~~~~~g~~~~A~~~y~~al~ 172 (176)
T 2r5s_A 118 YNQVGRDEEALELLWNILKVNLG-AQDGEVK------------------------KTFMDILSALGQGNAIASKYRRQLY 172 (176)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTT-TTTTHHH------------------------HHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHcccHHHHHHHHHHHHHhCcc-cChHHHH------------------------HHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 99999999988888776 55553 2221266 8999999999999999999987654
No 70
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.74 E-value=5.4e-07 Score=84.83 Aligned_cols=176 Identities=7% Similarity=-0.052 Sum_probs=143.1
Q ss_pred CCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHH
Q psy7457 59 KDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHT----ARNFPQAASSLAIAFQY 134 (497)
Q Consensus 59 ~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e----~~~~~~Ai~~le~a~~~ 134 (497)
+|.+.+.++..+.+|.+.|++. +|++.|++.++. .+. .....++.+|.. .++.++|+..|+++.+.
T Consensus 2 ~~~~~~a~~~lg~~~~~~~~~~--~A~~~~~~a~~~---~~~-----~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~ 71 (273)
T 1ouv_A 2 AEQDPKELVGLGAKSYKEKDFT--QAKKYFEKACDL---KEN-----SGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL 71 (273)
T ss_dssp ---CHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHT---TCH-----HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred CCCChHHHHHHHHHHHhCCCHH--HHHHHHHHHHHC---CCH-----HHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHC
Confidence 5788999999999999999999 999999999984 332 577889999999 99999999999999986
Q ss_pred ccCCCChhHHHHHHHHHHh----hccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchh
Q psy7457 135 SAHLIRPEHCNLYLEVLLE----LKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEIL 210 (497)
Q Consensus 135 ~~~~f~~~~vNiLaEL~i~----~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr 210 (497)
. +......++.+|.. .+++++|++.+++.... + ..+..
T Consensus 72 ~----~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~----------------------------~------~~~a~ 113 (273)
T 1ouv_A 72 N----YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL----------------------------K------YAEGC 113 (273)
T ss_dssp T----CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT----------------------------T------CHHHH
T ss_pred C----CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc----------------------------C------CccHH
Confidence 4 46778889999999 99999999999987641 1 23567
Q ss_pred HHHHHHHhh----cCCCCchhHHhhcc-ccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHh----cc
Q psy7457 211 SKFVITLVH----LRSETQFPTLLASL-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQ----EH 281 (497)
Q Consensus 211 ~KLgI~ll~----Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e----~g 281 (497)
..||.++.+ .|+.+.+...+... .. ++.+.+ ..+|.+|.. .+
T Consensus 114 ~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~-----~~~~a~------------------------~~lg~~~~~~~~~~~ 164 (273)
T 1ouv_A 114 ASLGGIYHDGKVVTRDFKKAVEYFTKACDL-----NDGDGC------------------------TILGSLYDAGRGTPK 164 (273)
T ss_dssp HHHHHHHHHCSSSCCCHHHHHHHHHHHHHT-----TCHHHH------------------------HHHHHHHHHTSSSCC
T ss_pred HHHHHHHHcCCCcccCHHHHHHHHHHHHhc-----CcHHHH------------------------HHHHHHHHcCCCCCC
Confidence 788888888 77777766665444 32 232255 889999999 99
Q ss_pred cHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHH
Q psy7457 282 YEAYAVQVLVLLVSSEKYNQPGVWKQLAETYEK 314 (497)
Q Consensus 282 ~y~~Al~~l~~L~~~~~y~~~~vwl~lAeCy~~ 314 (497)
.+++|+.+|...... ..+..+..+|.||..
T Consensus 165 ~~~~A~~~~~~a~~~---~~~~a~~~lg~~~~~ 194 (273)
T 1ouv_A 165 DLKKALASYDKACDL---KDSPGCFNAGNMYHH 194 (273)
T ss_dssp CHHHHHHHHHHHHHT---TCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHC---CCHHHHHHHHHHHHc
Confidence 999999999998876 356779999999988
No 71
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.72 E-value=6.4e-08 Score=96.18 Aligned_cols=175 Identities=8% Similarity=-0.026 Sum_probs=132.0
Q ss_pred hhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCC--
Q psy7457 23 SQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSD-- 100 (497)
Q Consensus 23 ~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~-- 100 (497)
...-....++++|+-+|-+++..-+. ..+++.....+...+.+|..+|++. +|++.|++.++. .|...
T Consensus 110 g~~~~~~g~~~~A~~~~~~al~~~~~-------~~~~~~~a~~~~~lg~~~~~~~~~~--~A~~~~~~al~~-~~~~~~~ 179 (383)
T 3ulq_A 110 GMYELDQREYLSAIKFFKKAESKLIF-------VKDRIEKAEFFFKMSESYYYMKQTY--FSMDYARQAYEI-YKEHEAY 179 (383)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTGGG-------CCCHHHHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-HHTCSTT
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHhh-------CCCHHHHHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHH-HHhCccc
Confidence 33344567788888888888774211 1234446789999999999999999 999999999998 77654
Q ss_pred hhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCCh----hHHHHHHHHHHhhccHHHHHHHHHHhchheeeecc
Q psy7457 101 PQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRP----EHCNLYLEVLLELKRYETCVEVLRRFANIEITYFK 176 (497)
Q Consensus 101 ~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~----~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~ 176 (497)
......+...+|.+|...|++++|++.|+++++..+..-+. ...+-++.+|..+|+|++|++.+++.....- ..
T Consensus 180 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~--~~ 257 (383)
T 3ulq_A 180 NIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFE--ES 257 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH--HT
T ss_pred hHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH--hh
Confidence 34456788899999999999999999999999988765332 2467799999999999999999988765321 00
Q ss_pred CCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhcc
Q psy7457 177 LFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLASL 233 (497)
Q Consensus 177 ~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l 233 (497)
. + .|. -......+|.++.++|+.+.+...+...
T Consensus 258 ~-------~-----------~~~------~~~~~~~l~~~~~~~g~~~~A~~~~~~a 290 (383)
T 3ulq_A 258 N-------I-----------LPS------LPQAYFLITQIHYKLGKIDKAHEYHSKG 290 (383)
T ss_dssp T-------C-----------GGG------HHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred c-------c-----------chh------HHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 0 0 011 2456788999999999988877776544
No 72
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=98.71 E-value=2.6e-08 Score=109.25 Aligned_cols=168 Identities=7% Similarity=-0.110 Sum_probs=137.1
Q ss_pred CCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHcc
Q psy7457 57 LSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSA 136 (497)
Q Consensus 57 ~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~ 136 (497)
..+|++.+.+..++.+|.+.|++. +|++.|+++++. .|.+. ++.-.+|.+|...|++++|+..|++++...|
T Consensus 427 ~~~p~~~~~~~~~a~~~~~~g~~~--~A~~~~~~al~~-~p~~~-----~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P 498 (681)
T 2pzi_A 427 VDFSESVELPLMEVRALLDLGDVA--KATRKLDDLAER-VGWRW-----RLVWYRAVAELLTGDYDSATKHFTEVLDTFP 498 (681)
T ss_dssp -CCTTCSHHHHHHHHHHHHHTCHH--HHHHHHHHHHHH-HCCCH-----HHHHHHHHHHHHHTCHHHHHHHHHHHHHHST
T ss_pred cccccchhHHHHHHHHHHhcCCHH--HHHHHHHHHhcc-CcchH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 678999999999999999999999 999999999999 89884 6888999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHH
Q psy7457 137 HLIRPEHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVIT 216 (497)
Q Consensus 137 ~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ 216 (497)
+. ..-.+.++.+|..+|+|++ ++..++....- |++ .+....+|.+
T Consensus 499 ~~--~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~--------------------------P~~------~~a~~~lg~~ 543 (681)
T 2pzi_A 499 GE--LAPKLALAATAELAGNTDE-HKFYQTVWSTN--------------------------DGV------ISAAFGLARA 543 (681)
T ss_dssp TC--SHHHHHHHHHHHHHTCCCT-TCHHHHHHHHC--------------------------TTC------HHHHHHHHHH
T ss_pred CC--hHHHHHHHHHHHHcCChHH-HHHHHHHHHhC--------------------------Cch------HHHHHHHHHH
Confidence 75 5667889999999999999 88887765421 443 4678999999
Q ss_pred HhhcCCCCchhHHhhcc-ccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcc--------cHHHHH
Q psy7457 217 LVHLRSETQFPTLLASL-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEH--------YEAYAV 287 (497)
Q Consensus 217 ll~Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g--------~y~~Al 287 (497)
+..+|+.+++...++.. ..+| ++.+ .+ +..|.+|...| .+.+|.
T Consensus 544 ~~~~g~~~~A~~~~~~al~l~P-~~~~--a~------------------------~~~~~~~~~~~~~~~~~~~~~~~A~ 596 (681)
T 2pzi_A 544 RSAEGDRVGAVRTLDEVPPTSR-HFTT--AR------------------------LTSAVTLLSGRSTSEVTEEQIRDAA 596 (681)
T ss_dssp HHHTTCHHHHHHHHHTSCTTST-THHH--HH------------------------HHHHHHTC-------CCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHhhcccCc-ccHH--HH------------------------HHHHHHHHccCCCCCCCHHHHHHHH
Confidence 99999999988888766 5544 3445 66 77888876644 477777
Q ss_pred HHHHHHh
Q psy7457 288 QVLVLLV 294 (497)
Q Consensus 288 ~~l~~L~ 294 (497)
+.+..+.
T Consensus 597 ~~l~~~~ 603 (681)
T 2pzi_A 597 RRVEALP 603 (681)
T ss_dssp HHHHTSC
T ss_pred HHHhhCC
Confidence 7776554
No 73
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.71 E-value=3.2e-07 Score=85.72 Aligned_cols=103 Identities=8% Similarity=0.030 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCC--
Q psy7457 63 LDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIR-- 140 (497)
Q Consensus 63 ~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~-- 140 (497)
...+..++..+...|++. +|+..|+++++. .|.+. .....+...+|.+|...|++++|++.++.++...+..-+
T Consensus 5 ~~~l~~~g~~~~~~g~~~--~A~~~~~~al~~-~~~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 80 (338)
T 3ro2_A 5 CLELALEGERLCKSGDCR--AGVSFFEAAVQV-GTEDL-KTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQL 80 (338)
T ss_dssp HHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-CCSCH-HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHhccHH--HHHHHHHHHHhh-CcccH-HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccH
Confidence 556778899999999999 999999999999 78763 555678899999999999999999999999987543322
Q ss_pred --hhHHHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 141 --PEHCNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 141 --~~~vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
..-...++.+|...|+|++|++.+.+.-.
T Consensus 81 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 111 (338)
T 3ro2_A 81 GEAKASGNLGNTLKVLGNFDEAIVCCQRHLD 111 (338)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 24477889999999999999999988654
No 74
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=98.69 E-value=1.3e-07 Score=92.65 Aligned_cols=170 Identities=7% Similarity=-0.051 Sum_probs=137.3
Q ss_pred CCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCC
Q psy7457 59 KDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHL 138 (497)
Q Consensus 59 ~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~ 138 (497)
+|+|...+...+.+|.+.|++. +|++.|++ |.+. ++.-.++.+|..+|+.++|+..|++++...|+.
T Consensus 97 ~P~~~~~~~~la~~~~~~g~~~--~Al~~l~~------~~~~-----~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~ 163 (291)
T 3mkr_A 97 DVTNTTFLLMAASIYFYDQNPD--AALRTLHQ------GDSL-----ECMAMTVQILLKLDRLDLARKELKKMQDQDEDA 163 (291)
T ss_dssp CCSCHHHHHHHHHHHHHTTCHH--HHHHHHTT------CCSH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred CCCCHHHHHHHHHHHHHCCCHH--HHHHHHhC------CCCH-----HHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCc
Confidence 6999999999999999999999 99999987 5443 678889999999999999999999999998875
Q ss_pred CChhHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHh
Q psy7457 139 IRPEHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLV 218 (497)
Q Consensus 139 f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll 218 (497)
....-...++.++...|+|++|+.++++.... .|+ ..++..-+|+|+.
T Consensus 164 ~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~--------------------------~p~------~~~~~~~la~~~~ 211 (291)
T 3mkr_A 164 TLTQLATAWVSLAAGGEKLQDAYYIFQEMADK--------------------------CSP------TLLLLNGQAACHM 211 (291)
T ss_dssp HHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHH--------------------------SCC------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCchHHHHHHHHHHHHHHh--------------------------CCC------cHHHHHHHHHHHH
Confidence 21111233456666779999999999887642 144 3468889999999
Q ss_pred hcCCCCchhHHhhcc-ccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHH-HHHHHHHHhcC
Q psy7457 219 HLRSETQFPTLLASL-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAY-AVQVLVLLVSS 296 (497)
Q Consensus 219 ~Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~-Al~~l~~L~~~ 296 (497)
++|+.+++...+... ..+| +.++ .+ ...|.++...|.+.+ |.+++..++..
T Consensus 212 ~~g~~~eA~~~l~~al~~~p-~~~~--~l------------------------~~l~~~~~~~g~~~eaa~~~~~~~~~~ 264 (291)
T 3mkr_A 212 AQGRWEAAEGVLQEALDKDS-GHPE--TL------------------------INLVVLSQHLGKPPEVTNRYLSQLKDA 264 (291)
T ss_dssp HTTCHHHHHHHHHHHHHHCT-TCHH--HH------------------------HHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCC-CCHH--HH------------------------HHHHHHHHHcCCCHHHHHHHHHHHHHh
Confidence 999999999998776 5555 4455 67 889999999999986 57899888866
Q ss_pred CCCC
Q psy7457 297 EKYN 300 (497)
Q Consensus 297 ~~y~ 300 (497)
..-+
T Consensus 265 ~P~~ 268 (291)
T 3mkr_A 265 HRSH 268 (291)
T ss_dssp CTTC
T ss_pred CCCC
Confidence 6544
No 75
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.69 E-value=1.1e-07 Score=88.41 Aligned_cols=180 Identities=10% Similarity=0.004 Sum_probs=136.5
Q ss_pred ChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHH
Q psy7457 10 NPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQ 89 (497)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~ 89 (497)
+|+.|+..+...+.+ .+.++|+-+|.+++..++ .+|...+.++.++.+|.+.|++. +|++.|+
T Consensus 3 ~~~~~~~~a~~~~~~-----g~~~~A~~~~~~~~~~~p----------~~~~~~~a~~~lg~~~~~~~~~~--~A~~~~~ 65 (225)
T 2yhc_A 3 PPNEIYATAQQKLQD-----GNWRQAITQLEALDNRYP----------FGPYSQQVQLDLIYAYYKNADLP--LAQAAID 65 (225)
T ss_dssp CHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHCT----------TSTTHHHHHHHHHHHHHHTTCHH--HHHHHHH
T ss_pred CHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHhCC----------CChHHHHHHHHHHHHHHhcCCHH--HHHHHHH
Confidence 578888888766554 577889999999887311 12233578999999999999999 9999999
Q ss_pred HHHhccCCCCChhhHHHHHHHHHHHHHh------------------cCCHHHHHHHHHHHHHHccCCCChhHH-------
Q psy7457 90 RYLKNITPDSDPQTILDLSTRAAHVYHT------------------ARNFPQAASSLAIAFQYSAHLIRPEHC------- 144 (497)
Q Consensus 90 ~il~~~~P~d~~~~~~~~~k~LA~~Y~e------------------~~~~~~Ai~~le~a~~~~~~~f~~~~v------- 144 (497)
++++. .|.+.. .....-.++.+|.+ .|+.++|+..|+++++.+|+.-.-.+.
T Consensus 66 ~~l~~-~P~~~~--~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~ 142 (225)
T 2yhc_A 66 RFIRL-NPTHPN--IDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFL 142 (225)
T ss_dssp HHHHH-CTTCTT--HHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHH
T ss_pred HHHHH-CcCCCc--HHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHH
Confidence 99999 998862 12244556666654 679999999999999999986432211
Q ss_pred --------HHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHH
Q psy7457 145 --------NLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVIT 216 (497)
Q Consensus 145 --------NiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ 216 (497)
-.++.+|...|+|.+|+..+++.... .|++. ...+...++|.|
T Consensus 143 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~--------------------------~p~~~---~~~~a~~~l~~~ 193 (225)
T 2yhc_A 143 KDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRD--------------------------YPDTQ---ATRDALPLMENA 193 (225)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------------------------STTSH---HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHH--------------------------CcCCC---ccHHHHHHHHHH
Confidence 35678899999999999999886642 14431 024789999999
Q ss_pred HhhcCCCCchhHHhhcc-ccCcc
Q psy7457 217 LVHLRSETQFPTLLASL-KFDVE 238 (497)
Q Consensus 217 ll~Lg~~~~~~~l~~~l-~e~~e 238 (497)
..++|+.+.+...+..+ ...|.
T Consensus 194 ~~~~g~~~~A~~~~~~l~~~~~~ 216 (225)
T 2yhc_A 194 YRQMQMNAQAEKVAKIIAANSSN 216 (225)
T ss_dssp HHHTTCHHHHHHHHHHHHHCCSC
T ss_pred HHHcCCcHHHHHHHHHHHhhCCC
Confidence 99999999988888777 44443
No 76
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.69 E-value=6.7e-08 Score=94.02 Aligned_cols=183 Identities=10% Similarity=0.003 Sum_probs=144.8
Q ss_pred ccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCH
Q psy7457 42 VRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNF 121 (497)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~ 121 (497)
..+......++.+.. |.+.+.++..|..+.+.|++. .|++.|+++++. -|.+. ++...+|.+|...|+.
T Consensus 99 ~~~~~~l~~~l~~~l---p~~~~~~~~~a~~~~~~g~~~--~A~~~~~~al~~-~P~~~-----~a~~~la~~~~~~g~~ 167 (287)
T 3qou_A 99 PQPEEAIRALLDXVL---PREEELXAQQAMQLMQESNYT--DALPLLXDAWQL-SNQNG-----EIGLLLAETLIALNRS 167 (287)
T ss_dssp CCCHHHHHHHHHHHS---CCHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-TTSCH-----HHHHHHHHHHHHTTCH
T ss_pred CCCHHHHHHHHHHHc---CCchhhHHHHHHHHHhCCCHH--HHHHHHHHHHHh-CCcch-----hHHHHHHHHHHHCCCH
Confidence 344444555554443 788999999999999999999 999999999999 99885 7889999999999999
Q ss_pred HHHHHHHHHHHHHccCCCChhHHHHHHHH-HHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCC
Q psy7457 122 PQAASSLAIAFQYSAHLIRPEHCNLYLEV-LLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSD 200 (497)
Q Consensus 122 ~~Ai~~le~a~~~~~~~f~~~~vNiLaEL-~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~ 200 (497)
++|+..|+++....|+ .....+.+.+ +...+++..|+..+++.... -|++
T Consensus 168 ~~A~~~l~~~~~~~p~---~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~--------------------------~P~~ 218 (287)
T 3qou_A 168 EDAEAVLXTIPLQDQD---TRYQGLVAQIELLXQAADTPEIQQLQQQVAE--------------------------NPED 218 (287)
T ss_dssp HHHHHHHTTSCGGGCS---HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHH--------------------------CTTC
T ss_pred HHHHHHHHhCchhhcc---hHHHHHHHHHHHHhhcccCccHHHHHHHHhc--------------------------CCcc
Confidence 9999999999999884 3333333333 56778888899888776541 1553
Q ss_pred CCCCCCcchhHHHHHHHhhcCCCCchhHHhhcc-ccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHh
Q psy7457 201 PNLVPPPEILSKFVITLVHLRSETQFPTLLASL-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQ 279 (497)
Q Consensus 201 l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e 279 (497)
.+.+..||.++...|+.+++...+..+ ..+|. +.+.+.+ .-++.+|..
T Consensus 219 ------~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~-~~~~~a~------------------------~~l~~~~~~ 267 (287)
T 3qou_A 219 ------AALATQLALQLHQVGRNEEALELLFGHLRXDLT-AADGQTR------------------------XTFQEILAA 267 (287)
T ss_dssp ------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-GGGGHHH------------------------HHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHcccHHHHHHHHHHHHhcccc-cccchHH------------------------HHHHHHHHH
Confidence 478999999999999999988888777 55553 3222266 899999999
Q ss_pred cccHHHHHHHHHHHhc
Q psy7457 280 EHYEAYAVQVLVLLVS 295 (497)
Q Consensus 280 ~g~y~~Al~~l~~L~~ 295 (497)
.|..++|...|...+.
T Consensus 268 ~g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 268 LGTGDALASXYRRQLY 283 (287)
T ss_dssp HCTTCHHHHHHHHHHH
T ss_pred cCCCCcHHHHHHHHHH
Confidence 9999999998876543
No 77
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=98.68 E-value=1.5e-07 Score=84.65 Aligned_cols=107 Identities=16% Similarity=0.014 Sum_probs=97.3
Q ss_pred HhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q psy7457 53 IQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAF 132 (497)
Q Consensus 53 ~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~ 132 (497)
.++...+|++.+.++.++..+.+.|++. .|++.|+++++. -|.+. .+...++.+|...|++++|+..|++++
T Consensus 26 ~~al~l~p~~~~~~~~lg~~~~~~g~~~--eA~~~~~~al~~-~P~~~-----~~~~~lg~~~~~~g~~~~Ai~~~~~al 97 (151)
T 3gyz_A 26 KDINAIPDDMMDDIYSYAYDFYNKGRIE--EAEVFFRFLCIY-DFYNV-----DYIMGLAAIYQIKEQFQQAADLYAVAF 97 (151)
T ss_dssp GGGCCSCHHHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHh-CCCCH-----HHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 4555569999999999999999999999 999999999999 99885 677899999999999999999999999
Q ss_pred HHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 133 QYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 133 ~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
...|+. +.-..-++..|..+|+|++|++.+++...
T Consensus 98 ~l~P~~--~~~~~~lg~~~~~lg~~~eA~~~~~~al~ 132 (151)
T 3gyz_A 98 ALGKND--YTPVFHTGQCQLRLKAPLKAKECFELVIQ 132 (151)
T ss_dssp HHSSSC--CHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhCCCC--cHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 999974 56678899999999999999999988765
No 78
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=98.67 E-value=1.8e-07 Score=80.40 Aligned_cols=105 Identities=9% Similarity=0.087 Sum_probs=95.0
Q ss_pred hcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q psy7457 55 RGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQY 134 (497)
Q Consensus 55 ~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~ 134 (497)
.+-.||+..+.+..|...|.+.|++. +|++.|++.++. .|.+. .+.-.+|.+|..+|+.++|++.++++++.
T Consensus 5 ~a~inP~~a~~~~~~G~~~~~~g~~~--~A~~~~~~al~~-~p~~~-----~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 76 (126)
T 4gco_A 5 LAYINPELAQEEKNKGNEYFKKGDYP--TAMRHYNEAVKR-DPENA-----ILYSNRAACLTKLMEFQRALDDCDTCIRL 76 (126)
T ss_dssp --CCCHHHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHCHHHHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHh-CCCCH-----HHHHHHhhHHHhhccHHHHHHHHHHHHHh
Confidence 34568999999999999999999999 999999999999 99885 68889999999999999999999999999
Q ss_pred ccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 135 SAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 135 ~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
.|.. ..-...++..|..+|+|++|++.+++...
T Consensus 77 ~p~~--~~a~~~lg~~~~~~~~~~~A~~~~~~al~ 109 (126)
T 4gco_A 77 DSKF--IKGYIRKAACLVAMREWSKAQRAYEDALQ 109 (126)
T ss_dssp CTTC--HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhhh--hHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 9875 56688899999999999999999988764
No 79
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.66 E-value=2.9e-07 Score=91.66 Aligned_cols=232 Identities=9% Similarity=-0.029 Sum_probs=158.4
Q ss_pred cccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCC--hhh
Q psy7457 26 SIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSD--PQT 103 (497)
Q Consensus 26 ~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~--~~~ 103 (497)
-....+.++|+-+|-+++..-+ ...++|.....+...+.+|..+|++. +|++.|++.+.. .|... ...
T Consensus 111 ~~~~g~~~~A~~~~~~al~~~~-------~~~~~~~~a~~~~~lg~~y~~~~~~~--~A~~~~~~al~~-~~~~~~~~~~ 180 (378)
T 3q15_A 111 EFDQKEYVEAIGYYREAEKELP-------FVSDDIEKAEFHFKVAEAYYHMKQTH--VSMYHILQALDI-YQNHPLYSIR 180 (378)
T ss_dssp HHHTTCHHHHHHHHHHHHTTGG-------GCCCHHHHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-HHTSTTCHHH
T ss_pred HHHHCCHHHHHHHHHHHHHHHh-------hCCChHHHHHHHHHHHHHHHHcCCcH--HHHHHHHHHHHH-HHhCCCchhh
Confidence 3445677788888877776422 12344566889999999999999999 999999999998 77643 234
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCCh----hHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCC
Q psy7457 104 ILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRP----EHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFP 179 (497)
Q Consensus 104 ~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~----~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~ 179 (497)
.......+|.+|...|++++|++.|+++++..+..-+. .-.+-++.+|..+|+|++|++.+++.-...- ...
T Consensus 181 ~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~--~~~-- 256 (378)
T 3q15_A 181 TIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSR--EKV-- 256 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH--HHC--
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH--hhC--
Confidence 56788899999999999999999999999977544322 3467789999999999999999988764210 000
Q ss_pred CCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhcc-ccCcccccccchh--hhhHHHHHH-
Q psy7457 180 QDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLASL-KFDVEMYGTITVY--LDIAEALIQ- 255 (497)
Q Consensus 180 ~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly--~~~~~~~~~- 255 (497)
.|. -......+|.+..++|+.+.+...+... .. ..+.++.+.. +........
T Consensus 257 -----------------~~~------~~~~~~~la~~~~~~g~~~~A~~~~~~al~~-~~~~~~~~~~~~~~~l~~ly~~ 312 (378)
T 3q15_A 257 -----------------PDL------LPKVLFGLSWTLCKAGQTQKAFQFIEEGLDH-ITARSHKFYKELFLFLQAVYKE 312 (378)
T ss_dssp -----------------GGG------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCTTCCSCHHHHHHHHHHHHSS
T ss_pred -----------------Chh------HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-HHHcCCHHHHHHHHHHHHHHhC
Confidence 011 2456778899999999988877776544 21 1122220010 000000000
Q ss_pred ----HHHHHHHHHhh--------hhhhHHHHHHHHhcccHHHHHHHHHHHhc
Q psy7457 256 ----EHYEAYAVQFK--------ELVYLDIAEALIQEHYEAYAVQVLVLLVS 295 (497)
Q Consensus 256 ----~~~~~~~~~~~--------~~~~ldvaeAl~e~g~y~~Al~~l~~L~~ 295 (497)
+.+..+..+|. ..++..+|.+|.+.|+|++|+.+|...+.
T Consensus 313 ~~~~~~~~~al~~~~~~~~~~~~~~~~~~la~~y~~~g~~~~A~~~~~~al~ 364 (378)
T 3q15_A 313 TVDERKIHDLLSYFEKKNLHAYIEACARSAAAVFESSCHFEQAAAFYRKVLK 364 (378)
T ss_dssp SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 11444444443 33677888888888888888888876553
No 80
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.66 E-value=2.5e-08 Score=99.14 Aligned_cols=207 Identities=9% Similarity=-0.051 Sum_probs=144.4
Q ss_pred cccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCC-hhhHHH
Q psy7457 28 QVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSD-PQTILD 106 (497)
Q Consensus 28 ~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~-~~~~~~ 106 (497)
...++++|+-+|-+++...+.. ...+|.....+...+.+|..+|++. +|++.|++.++. .|... ......
T Consensus 155 ~~~~~~~A~~~~~~al~~~~~~------~~~~~~~~~~~~~lg~~~~~~g~~~--~A~~~~~~al~~-~~~~~~~~~~~~ 225 (383)
T 3ulq_A 155 YMKQTYFSMDYARQAYEIYKEH------EAYNIRLLQCHSLFATNFLDLKQYE--DAISHFQKAYSM-AEAEKQPQLMGR 225 (383)
T ss_dssp HTTCHHHHHHHHHHHHHHHHTC------STTHHHHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-HHHTTCHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHhC------ccchHHHHHHHHHHHHHHHHhcCHH--HHHHHHHHHHHH-HHHcCChHHHHH
Confidence 3567888888888888753221 1113445678889999999999999 999999999988 66443 344456
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCC----hhHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCC
Q psy7457 107 LSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIR----PEHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDS 182 (497)
Q Consensus 107 ~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~----~~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~ 182 (497)
+...+|.+|...|+.++|+..+++++...+..-+ ..-.+.++.+|..+|+|++|++.+++.-...- ...
T Consensus 226 ~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~--~~~----- 298 (383)
T 3ulq_A 226 TLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQ--KAG----- 298 (383)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH--HHT-----
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH--HcC-----
Confidence 8889999999999999999999999995543322 34588899999999999999999988664321 000
Q ss_pred CCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhccc--cCcccccccchhhhhHHHHHHHHHHH
Q psy7457 183 TSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLASLK--FDVEMYGTITVYLDIAEALIQEHYEA 260 (497)
Q Consensus 183 e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l~--e~~ee~~D~~Ly~~~~~~~~~~~~~~ 260 (497)
+ |.. ...+. -||.+....|+....+..+..+. .......+ .+
T Consensus 299 --~------------~~~-----~~~~~-~l~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~--~~-------------- 342 (383)
T 3ulq_A 299 --D------------VIY-----LSEFE-FLKSLYLSGPDEEAIQGFFDFLESKMLYADLED--FA-------------- 342 (383)
T ss_dssp --C------------HHH-----HHHHH-HHHHHHTSSCCHHHHHHHHHHHHHTTCHHHHHH--HH--------------
T ss_pred --C------------HHH-----HHHHH-HHHHHHhCCCcHHHHHHHHHHHHHCcCHHHHHH--HH--------------
Confidence 0 110 11122 36666666666422333333331 12222333 44
Q ss_pred HHHHhhhhhhHHHHHHHHhcccHHHHHHHHHHHhcC
Q psy7457 261 YAVQFKELVYLDIAEALIQEHYEAYAVQVLVLLVSS 296 (497)
Q Consensus 261 ~~~~~~~~~~ldvaeAl~e~g~y~~Al~~l~~L~~~ 296 (497)
..+|.+|...|+|++|+.+|...+..
T Consensus 343 ----------~~la~~y~~~g~~~~A~~~~~~al~~ 368 (383)
T 3ulq_A 343 ----------IDVAKYYHERKNFQKASAYFLKVEQV 368 (383)
T ss_dssp ----------HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ----------HHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 89999999999999999999876653
No 81
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=98.66 E-value=1.8e-07 Score=80.66 Aligned_cols=108 Identities=10% Similarity=-0.106 Sum_probs=96.3
Q ss_pred HHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q psy7457 52 LIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIA 131 (497)
Q Consensus 52 ~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a 131 (497)
+.++...+|++.+.++.++..+.+.|++. +|++.|+++++. .|.+. .+...+|.+|...|++++|+..|+++
T Consensus 7 l~~al~~~p~~~~~~~~~a~~~~~~g~~~--~A~~~~~~al~~-~p~~~-----~~~~~lg~~~~~~g~~~~A~~~~~~a 78 (142)
T 2xcb_A 7 LAMLRGLSEDTLEQLYALGFNQYQAGKWD--DAQKIFQALCML-DHYDA-----RYFLGLGACRQSLGLYEQALQSYSYG 78 (142)
T ss_dssp --CCTTCCHHHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHccHH--HHHHHHHHHHHh-CCccH-----HHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 45666678999999999999999999999 999999999999 89875 67789999999999999999999999
Q ss_pred HHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 132 FQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 132 ~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
+...|+. +.-...++..|..+|+|++|++.+++...
T Consensus 79 l~~~p~~--~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 114 (142)
T 2xcb_A 79 ALMDINE--PRFPFHAAECHLQLGDLDGAESGFYSARA 114 (142)
T ss_dssp HHHCTTC--THHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HhcCCCC--cHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 9999964 55677899999999999999999988664
No 82
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.66 E-value=9.2e-08 Score=76.00 Aligned_cols=103 Identities=7% Similarity=-0.031 Sum_probs=94.4
Q ss_pred CCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCC
Q psy7457 59 KDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHL 138 (497)
Q Consensus 59 ~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~ 138 (497)
+|++.+.+..++.++.+.|++. +|+..|+++++. .|.+. .+...+|.+|...|+.++|+..+++++...|..
T Consensus 2 ~p~~~~~~~~~~~~~~~~~~~~--~A~~~~~~a~~~-~~~~~-----~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~ 73 (112)
T 2kck_A 2 VDQNPEEYYLEGVLQYDAGNYT--ESIDLFEKAIQL-DPEES-----KYWLMKGKALYNLERYEEAVDCYNYVINVIEDE 73 (112)
T ss_dssp CCSSTTGGGGHHHHHHSSCCHH--HHHHHHHHHHHH-CCCCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCT
T ss_pred CCCcHHHHHHHHHHHHHhhhHH--HHHHHHHHHHHh-CcCCH-----HHHHHHHHHHHHccCHHHHHHHHHHHHHhCccc
Confidence 5788899999999999999999 999999999999 88774 577899999999999999999999999999985
Q ss_pred CChhHHHHHHHHHHhh-ccHHHHHHHHHHhch
Q psy7457 139 IRPEHCNLYLEVLLEL-KRYETCVEVLRRFAN 169 (497)
Q Consensus 139 f~~~~vNiLaEL~i~~-k~y~~al~~I~~~~~ 169 (497)
....-...++.++..+ |+|++|++.+++...
T Consensus 74 ~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~ 105 (112)
T 2kck_A 74 YNKDVWAAKADALRYIEGKEVEAEIAEARAKL 105 (112)
T ss_dssp TCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGG
T ss_pred chHHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 4577789999999999 999999999998764
No 83
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.64 E-value=1.1e-06 Score=88.60 Aligned_cols=140 Identities=11% Similarity=-0.078 Sum_probs=84.3
Q ss_pred HHhhcCCCCccHHHHHHHHHHH----HHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHH
Q psy7457 52 LIQRGLSKDTILDNRARRLRLC----DEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASS 127 (497)
Q Consensus 52 ~~~~~~~~p~n~~~~~~RA~Ly----~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~ 127 (497)
+.+|...+|++...+...+..+ ...|++. .|.+.|++.+.. .|.+. .+...+|.+|...|+.++|++.
T Consensus 198 ~~~al~l~p~~~~~~~~l~~~~~~~~~~~~~~~--~a~~~~~~al~~-~~~~~-----~~~~~lg~~~~~~~~~~~A~~~ 269 (472)
T 4g1t_A 198 LRQAIRLNPDNQYLKVLLALKLHKMREEGEEEG--EGEKLVEEALEK-APGVT-----DVLRSAAKFYRRKDEPDKAIEL 269 (472)
T ss_dssp HHHHHHHCSSCHHHHHHHHHHHHHCC------C--HHHHHHHHHHHH-CSSCH-----HHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHhhcCCcchHHHHHHHHHHHHHHhhhhHHH--HHHHHHHHHHHh-CccHH-----HHHHHHHHHHHHcCchHHHHHH
Confidence 3455555777777766655444 3445666 788888888877 77664 5677788888888888888888
Q ss_pred HHHHHHHccCCCChhHHHHHHHHHHhh-------------------ccHHHHHHHHHHhchheeeeccCCCCCCCCCccc
Q psy7457 128 LAIAFQYSAHLIRPEHCNLYLEVLLEL-------------------KRYETCVEVLRRFANIEITYFKLFPQDSTSGEES 188 (497)
Q Consensus 128 le~a~~~~~~~f~~~~vNiLaEL~i~~-------------------k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~ 188 (497)
|+++++.+|+. ..-.+-++.+|... +.+++|+..+++....
T Consensus 270 ~~~al~~~p~~--~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~------------------ 329 (472)
T 4g1t_A 270 LKKALEYIPNN--AYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGHAVAHLKKADEA------------------ 329 (472)
T ss_dssp HHHHHHHSTTC--HHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHHHHHH------------------
T ss_pred HHHHHHhCCCh--HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhc------------------
Confidence 88888877764 22233344444322 1222233322222110
Q ss_pred cccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhcc
Q psy7457 189 NIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLASL 233 (497)
Q Consensus 189 ~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l 233 (497)
-|. ..+....+|.+...+|+.+++...++..
T Consensus 330 --------~~~------~~~~~~~lg~~~~~~~~~~~A~~~~~ka 360 (472)
T 4g1t_A 330 --------NDN------LFRVCSILASLHALADQYEEAEYYFQKE 360 (472)
T ss_dssp --------CTT------TCCCHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred --------CCc------hhhhhhhHHHHHHHhccHHHHHHHHHHH
Confidence 133 2356778999999999999988887665
No 84
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.63 E-value=6.2e-07 Score=73.54 Aligned_cols=103 Identities=15% Similarity=0.144 Sum_probs=94.3
Q ss_pred CCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHcc
Q psy7457 57 LSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSA 136 (497)
Q Consensus 57 ~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~ 136 (497)
...|.+...+..++..+.+.|++. +|++.|++.++. .|.+. .+...+|.+|...|+.++|+..+++++...|
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~--~A~~~~~~al~~-~~~~~-----~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~ 81 (133)
T 2lni_A 10 HMNPDLALMVKNKGNECFQKGDYP--QAMKHYTEAIKR-NPKDA-----KLYSNRAACYTKLLEFQLALKDCEECIQLEP 81 (133)
T ss_dssp CSSSCHHHHHHHHHHHHHHTTCSH--HHHHHHHHHHTT-CTTCH-----HHHHHHHHHHTTTTCHHHHHHHHHHHHHHCT
T ss_pred CcCcccHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHc-CCCcH-----HHHHHHHHHHHHhccHHHHHHHHHHHHHhCC
Confidence 457888999999999999999999 999999999999 88774 6888999999999999999999999999988
Q ss_pred CCCChhHHHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 137 HLIRPEHCNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 137 ~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
. +..-...++.++...|+|++|++.+++...
T Consensus 82 ~--~~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 112 (133)
T 2lni_A 82 T--FIKGYTRKAAALEAMKDYTKAMDVYQKALD 112 (133)
T ss_dssp T--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred C--chHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 6 466788899999999999999999988764
No 85
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=98.63 E-value=2.9e-07 Score=81.12 Aligned_cols=109 Identities=9% Similarity=-0.091 Sum_probs=98.4
Q ss_pred HHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy7457 51 ILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAI 130 (497)
Q Consensus 51 ~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~ 130 (497)
.+.++...+|++.+.++.++..+.+.|++. +|++.|++++.. -|.+. .+...+|.+|...|+.++|+..|++
T Consensus 9 ~~~~al~~~p~~~~~~~~~g~~~~~~g~~~--~A~~~~~~al~~-~p~~~-----~~~~~lg~~~~~~g~~~~A~~~~~~ 80 (148)
T 2vgx_A 9 TIAMLNEISSDTLEQLYSLAFNQYQSGXYE--DAHXVFQALCVL-DHYDS-----RFFLGLGACRQAMGQYDLAIHSYSY 80 (148)
T ss_dssp SHHHHTTCCHHHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hHHHHHcCCHhhHHHHHHHHHHHHHcCChH--HHHHHHHHHHHc-CcccH-----HHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 456667779999999999999999999999 999999999999 89885 5777999999999999999999999
Q ss_pred HHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 131 AFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 131 a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
++...|+. +.-..-++..|..+|++++|++.+++...
T Consensus 81 al~l~p~~--~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 117 (148)
T 2vgx_A 81 GAVMDIXE--PRFPFHAAECLLQXGELAEAESGLFLAQE 117 (148)
T ss_dssp HHHHSTTC--THHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHhcCCCC--chHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 99999965 45677889999999999999999988764
No 86
>1nuw_A Fructose-1,6-bisphosphatase; allosteric enzymes, gluconeogenesis, hydrola; HET: F6P; 1.30A {Sus scrofa} SCOP: e.7.1.1 PDB: 1eyi_A* 1eyj_A* 1cnq_A* 1eyk_A* 1nux_A* 1nuy_A* 1nuz_A* 1nv0_A* 1nv1_A* 1nv2_A* 1nv3_A* 1nv4_A* 1nv5_A* 1nv6_A* 1nv7_A* 1q9d_A* 2qvu_A* 2qvv_A* 1fj6_A* 1fj9_A* ...
Probab=98.63 E-value=2.1e-08 Score=102.57 Aligned_cols=96 Identities=32% Similarity=0.519 Sum_probs=73.5
Q ss_pred ccccCCCccchhHHHHHhhhcCCCCccc--cccc---------------c---cccccccCcCCcchhhhhhhhhhhHHH
Q psy7457 398 LITLRSSDIRIVRNTLRTFQSKPNNLGL--NVMY---------------A---NNCNLTSNVNVQGEEVKKLDVLSNELF 457 (497)
Q Consensus 398 ~~~~~t~~iTL~rfLl~~~~~~p~~~~~--~LL~---------------~---~~~g~aGs~N~~GE~QkkLDV~Anelf 457 (497)
|..+.++++||++||++.+.++|. .++ .+++ + +..|.+++.|.+||.|+++|+.++++|
T Consensus 3 ~~~~~~~~~tl~~~~~~~~~~~~~-~~~l~~ll~~~~~aa~~i~~~i~~~~l~~~~g~~~~~~~~gd~vt~~D~~ae~~i 81 (337)
T 1nuw_A 3 QAAFDTNIVTLTRFVMEEGRKARG-TGEMTQLLNSLCTAVKAISTAVRKAGIAHLYGIAGSTNVTGDQVKKLDVLSNDLV 81 (337)
T ss_dssp -----CCCCBHHHHHHHHHHHSCS-CTHHHHHHHHHHHHHHHHHHHHHTTTTTTCCSEEEEECTTSCEEEHHHHHHHHHH
T ss_pred ccccCCCceeHHHHHHHHhhcCCC-cHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccCCCChhhHHHHHHHHHH
Confidence 456677788999999999888776 434 4444 1 234567788999999999999999999
Q ss_pred HHHhccccCeeEEecCCCCceeecCCCCCCCCCeEEEec
Q psy7457 458 VNMLTSSYSTCLLVSEENETALEIHHQEASTGDPCVRLD 496 (497)
Q Consensus 458 ~~aL~~s~~Va~~aSEE~e~~i~v~~~~~~~G~Y~V~fD 496 (497)
+++|+++...++++|||.+.++.+++ ...|+|+++||
T Consensus 82 ~~~L~~~~p~~~ilsEE~~~~~~~~~--~~~~~~~wiiD 118 (337)
T 1nuw_A 82 INVLKSSFATCVLVSEEDKNAIIVEP--EKRGKYVVCFD 118 (337)
T ss_dssp HHHHHHTTCEEEEEETTCSSCEECCG--GGEEEEEEEEE
T ss_pred HHHHHhhCCCCEEEeCCCCCccccCc--CCCCCEEEEEE
Confidence 99999999999999999988765543 11278999998
No 87
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.62 E-value=2.3e-07 Score=79.33 Aligned_cols=135 Identities=10% Similarity=-0.025 Sum_probs=108.6
Q ss_pred CChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHH
Q psy7457 9 ENPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGY 88 (497)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y 88 (497)
+.++.|+.+++..+. ..++++|+-+|.+++.. +|++...+..++.+|...|++. +|++.|
T Consensus 11 ~~~~~~~~~a~~~~~-----~~~~~~A~~~~~~al~~-------------~~~~~~~~~~~a~~~~~~~~~~--~A~~~~ 70 (166)
T 1a17_A 11 KRAEELKTQANDYFK-----AKDYENAIKFYSQAIEL-------------NPSNAIYYGNRSLAYLRTECYG--YALGDA 70 (166)
T ss_dssp HHHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHH-------------STTCHHHHHHHHHHHHHTTCHH--HHHHHH
T ss_pred HHHHHHHHHHHHHHH-----ccCHHHHHHHHHHHHHh-------------CCCChHHHHHHHHHHHHcCCHH--HHHHHH
Confidence 345566666655443 45677888888887764 7888999999999999999999 999999
Q ss_pred HHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhc
Q psy7457 89 QRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFA 168 (497)
Q Consensus 89 ~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~ 168 (497)
++.++. .|.+. .+...+|.+|...|+.++|+..|++++..+|.....-..-..+..++..|+|++|++...+..
T Consensus 71 ~~a~~~-~~~~~-----~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~ 144 (166)
T 1a17_A 71 TRAIEL-DKKYI-----KGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKR 144 (166)
T ss_dssp HHHHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHh-CcccH-----HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHcccchH
Confidence 999999 88774 678899999999999999999999999999865322222334455778899999999988765
Q ss_pred h
Q psy7457 169 N 169 (497)
Q Consensus 169 ~ 169 (497)
.
T Consensus 145 ~ 145 (166)
T 1a17_A 145 S 145 (166)
T ss_dssp H
T ss_pred H
Confidence 4
No 88
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.61 E-value=1.2e-06 Score=84.92 Aligned_cols=195 Identities=11% Similarity=0.009 Sum_probs=140.0
Q ss_pred HHHHHHhCCcchhHHHHHHHHHHhccCCCC-ChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCCh----hHH
Q psy7457 70 LRLCDEIGLKNRGFVLAGYQRYLKNITPDS-DPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRP----EHC 144 (497)
Q Consensus 70 A~Ly~elG~~~~~~Al~~y~~il~~~~P~d-~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~----~~v 144 (497)
+.+|...|++. +|++.|++.+.. .|.. +......+...++.+|...|++++|+..|++++.-+|...+. ...
T Consensus 44 ~~~~~~~g~~~--~A~~~~~~al~~-~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~ 120 (292)
T 1qqe_A 44 ATIYRLRKELN--LAGDSFLKAADY-QKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFK 120 (292)
T ss_dssp HHHHHHTTCTH--HHHHHHHHHHHH-HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHcCCHH--HHHHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 56899999999 999999999998 6533 223345688899999999999999999999999999876654 357
Q ss_pred HHHHHHHHhh-ccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCC
Q psy7457 145 NLYLEVLLEL-KRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSE 223 (497)
Q Consensus 145 NiLaEL~i~~-k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~ 223 (497)
+-++.+|... |+|++|+...++...+.- .. ++. ..-.+...++|.+++.+|+.
T Consensus 121 ~~lg~~~~~~lg~~~~A~~~~~~Al~~~~--~~----------------------~~~--~~~~~~~~~lg~~~~~~g~~ 174 (292)
T 1qqe_A 121 FELGEILENDLHDYAKAIDCYELAGEWYA--QD----------------------QSV--ALSNKCFIKCADLKALDGQY 174 (292)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHH--HT----------------------TCH--HHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHH--hC----------------------CCh--HHHHHHHHHHHHHHHHhCCH
Confidence 8889999996 999999999988775321 00 000 00145678999999999999
Q ss_pred CchhHHhhcc-ccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHHHHHHHHhcCCC-CCh
Q psy7457 224 TQFPTLLASL-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAVQVLVLLVSSEK-YNQ 301 (497)
Q Consensus 224 ~~~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al~~l~~L~~~~~-y~~ 301 (497)
+++...+... ..++.. ++ ..+. . -..++.+|.+|...|.+.+|+..|...+.... +..
T Consensus 175 ~~A~~~~~~al~~~~~~-~~--~~~~-----~------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~ 234 (292)
T 1qqe_A 175 IEASDIYSKLIKSSMGN-RL--SQWS-----L------------KDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFAD 234 (292)
T ss_dssp HHHHHHHHHHHHTTSSC-TT--TGGG-----H------------HHHHHHHHHHHHHTTCHHHHHHHHHGGGCC------
T ss_pred HHHHHHHHHHHHHHhcC-Cc--ccHH-----H------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCC
Confidence 9887777665 433322 22 1000 0 00128899999999999999999999887443 332
Q ss_pred ---HHHHHHHHHHHH
Q psy7457 302 ---PGVWKQLAETYE 313 (497)
Q Consensus 302 ---~~vwl~lAeCy~ 313 (497)
...+..++.+|.
T Consensus 235 ~~~~~~l~~l~~~~~ 249 (292)
T 1qqe_A 235 SRESNFLKSLIDAVN 249 (292)
T ss_dssp ---HHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHH
Confidence 224555666664
No 89
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.61 E-value=5.7e-07 Score=72.92 Aligned_cols=103 Identities=10% Similarity=0.011 Sum_probs=93.0
Q ss_pred CCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHcc
Q psy7457 57 LSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSA 136 (497)
Q Consensus 57 ~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~ 136 (497)
..+|.+...+...+..+...|++. +|++.|+++++. .|.+. .+...+|.+|...|+.++|+..++.++...|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~--~A~~~~~~~~~~-~~~~~-----~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~ 77 (131)
T 2vyi_A 6 EEDSAEAERLKTEGNEQMKVENFE--AAVHFYGKAIEL-NPANA-----VYFCNRAAAYSKLGNYAGAVQDCERAICIDP 77 (131)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred hcchhhhHHHHHHHHHHHHccCHH--HHHHHHHHHHHc-CCCCH-----HHHHHHHHHHHHhhchHHHHHHHHHHHhcCc
Confidence 356788999999999999999999 999999999999 88774 6788999999999999999999999999988
Q ss_pred CCCChhHHHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 137 HLIRPEHCNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 137 ~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
.. ..-...++.++...|+|++|++.+++...
T Consensus 78 ~~--~~~~~~~~~~~~~~~~~~~A~~~~~~~~~ 108 (131)
T 2vyi_A 78 AY--SKAYGRMGLALSSLNKHVEAVAYYKKALE 108 (131)
T ss_dssp TC--HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cC--HHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 64 56688899999999999999999988664
No 90
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.58 E-value=6.7e-07 Score=86.92 Aligned_cols=162 Identities=17% Similarity=0.050 Sum_probs=129.6
Q ss_pred HHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 90 RYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 90 ~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
.+.+. +|.+. +..-.+|..+...|+.+.|+..|++++...|+. ..-...|+.+++..|++++|+..+++...
T Consensus 108 ~l~~~-lp~~~-----~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~--~~a~~~la~~~~~~g~~~~A~~~l~~~~~ 179 (287)
T 3qou_A 108 LLDXV-LPREE-----ELXAQQAMQLMQESNYTDALPLLXDAWQLSNQN--GEIGLLLAETLIALNRSEDAEAVLXTIPL 179 (287)
T ss_dssp HHHHH-SCCHH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSC--HHHHHHHHHHHHHTTCHHHHHHHHTTSCG
T ss_pred HHHHH-cCCch-----hhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcc--hhHHHHHHHHHHHCCCHHHHHHHHHhCch
Confidence 34444 77653 677899999999999999999999999999976 56688899999999999999999987543
Q ss_pred heeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhcc-ccCcccccccchhhh
Q psy7457 170 IEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLASL-KFDVEMYGTITVYLD 248 (497)
Q Consensus 170 ~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly~~ 248 (497)
. -|+ +......+++.+...+..+.+...+... ..+| +..+ .+
T Consensus 180 ~--------------------------~p~------~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P-~~~~--~~-- 222 (287)
T 3qou_A 180 Q--------------------------DQD------TRYQGLVAQIELLXQAADTPEIQQLQQQVAENP-EDAA--LA-- 222 (287)
T ss_dssp G--------------------------GCS------HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCT-TCHH--HH--
T ss_pred h--------------------------hcc------hHHHHHHHHHHHHhhcccCccHHHHHHHHhcCC-ccHH--HH--
Confidence 1 032 3456777788888888888766665555 5555 3344 77
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHHHHHHHHhcCCC-CChHHHHHHHHHHHHHhhhc
Q psy7457 249 IAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAVQVLVLLVSSEK-YNQPGVWKQLAETYEKSECL 318 (497)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al~~l~~L~~~~~-y~~~~vwl~lAeCy~~l~~l 318 (497)
+..|.+|...|.+++|+..|..++.... +..+..|..++.+|..++..
T Consensus 223 ----------------------~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~ 271 (287)
T 3qou_A 223 ----------------------TQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTG 271 (287)
T ss_dssp ----------------------HHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTT
T ss_pred ----------------------HHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCC
Confidence 9999999999999999999999988754 55688899999999998744
No 91
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.57 E-value=5.5e-07 Score=90.74 Aligned_cols=215 Identities=7% Similarity=-0.033 Sum_probs=137.2
Q ss_pred CCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHH---hCCcchhHHHHHHHHHHhccCCCCChhhHHHH
Q psy7457 31 NPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDE---IGLKNRGFVLAGYQRYLKNITPDSDPQTILDL 107 (497)
Q Consensus 31 ~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~e---lG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~ 107 (497)
+.++|+=||.+++. .+|+|.+.+...+.++.. .|+.. +|++.|++.++. .|.+. .....+
T Consensus 153 ~y~~A~~~~~kal~-------------~~p~~~~~~~~~~~~~~~l~~~~~~~--~al~~~~~al~l-~p~~~-~~~~~l 215 (472)
T 4g1t_A 153 QNERAKVCFEKALE-------------KKPKNPEFTSGLAIASYRLDNWPPSQ--NAIDPLRQAIRL-NPDNQ-YLKVLL 215 (472)
T ss_dssp HHHHHHHHHHHHHH-------------HSTTCHHHHHHHHHHHHHHHHSCCCC--CTHHHHHHHHHH-CSSCH-HHHHHH
T ss_pred cHHHHHHHHHHHHH-------------hCCCCHHHHHHHHHHHHHhcCchHHH--HHHHHHHHHhhc-CCcch-HHHHHH
Confidence 34555556655554 489999999999988655 46667 899999999999 88774 333344
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCcc
Q psy7457 108 STRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEE 187 (497)
Q Consensus 108 ~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~ 187 (497)
...++.++...++.+.|++.|+.++...|.. ....+-++.+|...++|.+|+..+++.....
T Consensus 216 ~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~--~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~---------------- 277 (472)
T 4g1t_A 216 ALKLHKMREEGEEEGEGEKLVEEALEKAPGV--TDVLRSAAKFYRRKDEPDKAIELLKKALEYI---------------- 277 (472)
T ss_dssp HHHHHHCC------CHHHHHHHHHHHHCSSC--HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS----------------
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHhCccH--HHHHHHHHHHHHHcCchHHHHHHHHHHHHhC----------------
Confidence 4555566667788999999999999999865 5567889999999999999999998866421
Q ss_pred ccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhccccCcccccccchhhhhHHHHHHHHHHHHHHHhh-
Q psy7457 188 SNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLASLKFDVEMYGTITVYLDIAEALIQEHYEAYAVQFK- 266 (497)
Q Consensus 188 ~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~- 266 (497)
|++ .++...+|.|....+. ... .......+. .. .....++.+...|.
T Consensus 278 ----------p~~------~~~~~~lg~~y~~~~~-----~~~---~~~~~~~~~--~~------~~~~~~~~A~~~~~~ 325 (472)
T 4g1t_A 278 ----------PNN------AYLHCQIGCCYRAKVF-----QVM---NLRENGMYG--KR------KLLELIGHAVAHLKK 325 (472)
T ss_dssp ----------TTC------HHHHHHHHHHHHHHHH-----HHH---HC------C--HH------HHHHHHHHHHHHHHH
T ss_pred ----------CCh------HHHHHHHHHHHHHHHH-----Hhh---hHHHHHHHH--HH------HHHhhHHHHHHHHHH
Confidence 342 3556667665432111 000 000001111 11 11222333333333
Q ss_pred --------hhhhHHHHHHHHhcccHHHHHHHHHHHhcCCCCC--hHHHHHHHHHHH
Q psy7457 267 --------ELVYLDIAEALIQEHYEAYAVQVLVLLVSSEKYN--QPGVWKQLAETY 312 (497)
Q Consensus 267 --------~~~~ldvaeAl~e~g~y~~Al~~l~~L~~~~~y~--~~~vwl~lAeCy 312 (497)
...+..+|.+|...|.|++|+.+|...+..+..+ ...++..+|..+
T Consensus 326 a~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~~~~~~~~~~~~~~ 381 (472)
T 4g1t_A 326 ADEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTPVAKQLLHLRYGNFQ 381 (472)
T ss_dssp HHHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHH
T ss_pred HhhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Confidence 2256899999999999999999999988765433 223556666543
No 92
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.56 E-value=1.4e-07 Score=86.56 Aligned_cols=185 Identities=11% Similarity=0.093 Sum_probs=127.9
Q ss_pred hCCcchhHHHHHHHHHHhccC----CCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCC------CChhHHH
Q psy7457 76 IGLKNRGFVLAGYQRYLKNIT----PDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHL------IRPEHCN 145 (497)
Q Consensus 76 lG~~~~~~Al~~y~~il~~~~----P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~------f~~~~vN 145 (497)
.|++. +|++.|++.++. + +.+. .....+...+|.+|...|++++|+..|++++...... ......+
T Consensus 14 ~~~~~--~A~~~~~~al~~-~~~~~~~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 89 (283)
T 3edt_B 14 LVPRG--SAVPLCKQALED-LEKTSGHDH-PDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLN 89 (283)
T ss_dssp CSCSS--SHHHHHHHHHHH-HHHHHCSSS-HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHH
T ss_pred CCCHH--HHHHHHHHHHHH-HHHhcCCCC-HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHH
Confidence 46666 777777777765 3 2232 2345788999999999999999999999999875221 2345688
Q ss_pred HHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCc
Q psy7457 146 LYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQ 225 (497)
Q Consensus 146 iLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~ 225 (497)
.++.+|...|+|++|++.+.+.....- ... -|++. .-......+|.++..+|+.+.
T Consensus 90 ~l~~~~~~~g~~~~A~~~~~~al~~~~--~~~-------------------~~~~~---~~~~~~~~la~~~~~~g~~~~ 145 (283)
T 3edt_B 90 NLAVLYGKRGKYKEAEPLCKRALEIRE--KVL-------------------GKFHP---DVAKQLNNLALLCQNQGKAEE 145 (283)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHHH--HHH-------------------CTTCH---HHHHHHHHHHHHHHTTTCHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHH--HHc-------------------CCCCh---HHHHHHHHHHHHHHHcCCHHH
Confidence 899999999999999999988664321 000 01111 035677889999999999888
Q ss_pred hhHHhhcc-cc-------CcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHHHHHHHHhcC-
Q psy7457 226 FPTLLASL-KF-------DVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAVQVLVLLVSS- 296 (497)
Q Consensus 226 ~~~l~~~l-~e-------~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al~~l~~L~~~- 296 (497)
+...+... .. +...... .+ ..+|.+|...|.+++|+.+|...+..
T Consensus 146 A~~~~~~al~~~~~~~~~~~~~~~~--~~------------------------~~la~~~~~~g~~~~A~~~~~~~l~~~ 199 (283)
T 3edt_B 146 VEYYYRRALEIYATRLGPDDPNVAK--TK------------------------NNLASCYLKQGKYQDAETLYKEILTRA 199 (283)
T ss_dssp HHHHHHHHHHHHHHHSCTTCHHHHH--HH------------------------HHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCHHHHH--HH------------------------HHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 77776544 22 1112223 44 89999999999999999999988764
Q ss_pred -------CCCChHHHHHHHHHHHHH
Q psy7457 297 -------EKYNQPGVWKQLAETYEK 314 (497)
Q Consensus 297 -------~~y~~~~vwl~lAeCy~~ 314 (497)
.......+|...+.++..
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (283)
T 3edt_B 200 HEKEFGSVNGDNKPIWMHAEEREES 224 (283)
T ss_dssp HHHHSSSCCSSCCCHHHHHHHHHHT
T ss_pred HHhcCCCcchhHHHHHHHHHHHHhc
Confidence 112233345555555543
No 93
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.53 E-value=6.1e-07 Score=94.73 Aligned_cols=156 Identities=15% Similarity=0.045 Sum_probs=118.7
Q ss_pred CCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHH
Q psy7457 31 NPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTR 110 (497)
Q Consensus 31 ~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~ 110 (497)
++++|+=+|.+++. .+|++.+.+...+.+|.+.|++. +|++.|++.++. .|.+. .+...
T Consensus 4 ~~~~A~~~~~~al~-------------~~p~~~~~~~~lg~~~~~~g~~~--~A~~~~~~al~~-~p~~~-----~~~~~ 62 (568)
T 2vsy_A 4 DGPRELLQLRAAVR-------------HRPQDFVAWLMLADAELGMGDTT--AGEMAVQRGLAL-HPGHP-----EAVAR 62 (568)
T ss_dssp ------------------------------CCHHHHHHHHHHHHHHTCHH--HHHHHHHHHHTT-STTCH-----HHHHH
T ss_pred cHHHHHHHHHHHHH-------------hCCCCHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHh-CCCCH-----HHHHH
Confidence 45566666666655 48899999999999999999999 999999999999 88874 68889
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccc
Q psy7457 111 AAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNI 190 (497)
Q Consensus 111 LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~ 190 (497)
+|.+|...|+.++|++.|+++++..|+. ..-.+.++.+|..+|+|++|++.+++.....
T Consensus 63 lg~~~~~~g~~~~A~~~~~~al~~~p~~--~~~~~~la~~~~~~g~~~~A~~~~~~al~~~------------------- 121 (568)
T 2vsy_A 63 LGRVRWTQQRHAEAAVLLQQASDAAPEH--PGIALWLGHALEDAGQAEAAAAAYTRAHQLL------------------- 121 (568)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTC--HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-------------------
T ss_pred HHHHHHHCCCHHHHHHHHHHHHhcCCCC--HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-------------------
Confidence 9999999999999999999999999865 6678899999999999999999998876421
Q ss_pred cccccccCCCCCCCCCcchhHHHHHHHhhc---CCCCchhHHhhcc-ccCccccc
Q psy7457 191 QITNYTVPSDPNLVPPPEILSKFVITLVHL---RSETQFPTLLASL-KFDVEMYG 241 (497)
Q Consensus 191 ~~~~~~~p~~l~l~lPiDLr~KLgI~ll~L---g~~~~~~~l~~~l-~e~~ee~~ 241 (497)
|+ ..+....+|.++..+ |+.+++...+... ..++....
T Consensus 122 -------p~------~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~ 163 (568)
T 2vsy_A 122 -------PE------EPYITAQLLNWRRRLCDWRALDVLSAQVRAAVAQGVGAVE 163 (568)
T ss_dssp -------TT------CHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHTCCCSC
T ss_pred -------CC------CHHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCCcccC
Confidence 33 246788999999999 7777776666655 55554433
No 94
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=98.51 E-value=3e-07 Score=80.85 Aligned_cols=108 Identities=10% Similarity=-0.028 Sum_probs=96.1
Q ss_pred HHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy7457 51 ILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAI 130 (497)
Q Consensus 51 ~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~ 130 (497)
.+.+|..++|++...++..+.+|.++|++. +|++.|++.++. .|.+. ++...+|.+|...|+.++|+..|++
T Consensus 19 ~~~~a~~~~p~~~~~~~~la~~y~~~~~~~--~A~~~~~~al~~-~p~~~-----~a~~~lg~~~~~~~~~~~A~~~~~~ 90 (150)
T 4ga2_A 19 SVQGSTPSPRQKSIKGFYFAKLYYEAKEYD--LAKKYICTYINV-QERDP-----KAHRFLGLLYELEENTDKAVECYRR 90 (150)
T ss_dssp HHHHHSCSHHHHHTTHHHHHHHHHHTTCHH--HHHHHHHHHHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHhcccCcccHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHh-CCCCH-----HHHHHHHHHHHHcCchHHHHHHHHH
Confidence 446677789999999999999999999999 999999999999 99885 7888999999999999999999999
Q ss_pred HHHHccCCCChhHHHHHHHHHHhhccHHHHHHH-HHHhc
Q psy7457 131 AFQYSAHLIRPEHCNLYLEVLLELKRYETCVEV-LRRFA 168 (497)
Q Consensus 131 a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~-I~~~~ 168 (497)
+++..|.. ..-.+-++.+|...+++.++++. +++..
T Consensus 91 al~~~p~~--~~~~~~la~~~~~~~~~~~aa~~~~~~al 127 (150)
T 4ga2_A 91 SVELNPTQ--KDLVLKIAELLCKNDVTDGRAKYWVERAA 127 (150)
T ss_dssp HHHHCTTC--HHHHHHHHHHHHHHCSSSSHHHHHHHHHH
T ss_pred HHHhCCCC--HHHHHHHHHHHHHcCChHHHHHHHHHHHH
Confidence 99999965 56788899999999999988875 45544
No 95
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.51 E-value=2.8e-06 Score=68.16 Aligned_cols=102 Identities=11% Similarity=0.085 Sum_probs=88.0
Q ss_pred CCCcc-HHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHcc
Q psy7457 58 SKDTI-LDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSA 136 (497)
Q Consensus 58 ~~p~n-~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~ 136 (497)
.+|.+ ...+...+.++.+.|++. +|++.|+++++. .|.+. .+...+|.+|...|+.++|+..+++++...|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~--~A~~~~~~~~~~-~~~~~-----~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~ 74 (125)
T 1na0_A 3 MDPGNSAEAWYNLGNAYYKQGDYD--EAIEYYQKALEL-DPNNA-----EAWYNLGNAYYKQGDYDEAIEYYQKALELDP 74 (125)
T ss_dssp ----CHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred CCccccHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHH-CcCcH-----HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCC
Confidence 35555 788999999999999999 999999999999 88764 6778999999999999999999999999988
Q ss_pred CCCChhHHHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 137 HLIRPEHCNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 137 ~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
+. ..-...++.++...|+|++|++.+++...
T Consensus 75 ~~--~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 105 (125)
T 1na0_A 75 NN--AEAWYNLGNAYYKQGDYDEAIEYYQKALE 105 (125)
T ss_dssp TC--HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cc--HHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 64 45677889999999999999999988664
No 96
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.49 E-value=1.6e-06 Score=90.62 Aligned_cols=211 Identities=11% Similarity=0.000 Sum_probs=153.5
Q ss_pred CChHHHHHHHHHHHhhhcc--cccCC-------ccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCc
Q psy7457 9 ENPQEYYSLLNLVLSQHSI--QVINP-------DESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLK 79 (497)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~--~~~~~-------~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~ 79 (497)
.+|..|+..+......... +..++ ++|+=+|.|+++ ..+|++...+..++.++.+.|++
T Consensus 270 ~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~------------~~~p~~~~l~~~~~~~~~~~g~~ 337 (530)
T 2ooe_A 270 HHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAIS------------TLLKKNMLLYFAYADYEESRMKY 337 (530)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTT------------TTCSSCHHHHHHHHHHHHHTTCH
T ss_pred CCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHH------------HhCcccHHHHHHHHHHHHhcCCH
Confidence 4789999999887652110 12233 366666666664 13789999999999999999999
Q ss_pred chhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhhccHHH
Q psy7457 80 NRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLELKRYET 159 (497)
Q Consensus 80 ~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~ 159 (497)
. +|.+.|+++++. -|.+.. .+--..+..+...|+++.|+++|++++...|.....-.-+.+.+. ...|++++
T Consensus 338 ~--~A~~~~~~al~~-~p~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~-~~~~~~~~ 409 (530)
T 2ooe_A 338 E--KVHSIYNRLLAI-EDIDPT----LVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEY-YCSKDKSV 409 (530)
T ss_dssp H--HHHHHHHHHHHS-SSSCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHH-HHTCCHHH
T ss_pred H--HHHHHHHHHhCc-cccCch----HHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHH-HHcCChhH
Confidence 9 999999999998 665531 255567788888999999999999999987753211111222222 25899999
Q ss_pred HHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhcc-cc---
Q psy7457 160 CVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLASL-KF--- 235 (497)
Q Consensus 160 al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l-~e--- 235 (497)
|.+++.+.... .|++ .++-..++....++|+.+.+..+++.. ..
T Consensus 410 A~~~~e~al~~--------------------------~p~~------~~~~~~~~~~~~~~g~~~~Ar~~~~~al~~~~~ 457 (530)
T 2ooe_A 410 AFKIFELGLKK--------------------------YGDI------PEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSL 457 (530)
T ss_dssp HHHHHHHHHHH--------------------------HTTC------HHHHHHHHHHHTTTTCHHHHHHHHHHHHHSCCS
T ss_pred HHHHHHHHHHH--------------------------CCCC------HHHHHHHHHHHHhCCCHhhHHHHHHHHHhccCC
Confidence 99999886642 1443 367788888899999998888887766 33
Q ss_pred CcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHHHHHHHHhcCC
Q psy7457 236 DVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAVQVLVLLVSSE 297 (497)
Q Consensus 236 ~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al~~l~~L~~~~ 297 (497)
+++...+ ++ ..-++...+.|..+.|..++......-
T Consensus 458 ~~~~~~~--lw------------------------~~~~~~e~~~G~~~~~~~~~~r~~~~~ 493 (530)
T 2ooe_A 458 PPEKSGE--IW------------------------ARFLAFESNIGDLASILKVEKRRFTAF 493 (530)
T ss_dssp CGGGCHH--HH------------------------HHHHHHHHHSSCHHHHHHHHHHHHHHT
T ss_pred CHHHHHH--HH------------------------HHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 4556667 78 777777788899999998887766543
No 97
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.49 E-value=9.6e-07 Score=87.85 Aligned_cols=178 Identities=10% Similarity=-0.045 Sum_probs=138.4
Q ss_pred HHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCC-hhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCCh
Q psy7457 63 LDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSD-PQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRP 141 (497)
Q Consensus 63 ~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~-~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~ 141 (497)
+.+++-++..+...|++. +|++.|++.++. .+... ......+...+|.+|...|+.+.|+..++++++.++...+.
T Consensus 101 ~~~~~~~g~~~~~~g~~~--~A~~~~~~al~~-~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~ 177 (378)
T 3q15_A 101 YYSLFFRGMYEFDQKEYV--EAIGYYREAEKE-LPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLY 177 (378)
T ss_dssp HHHHHHHHHHHHHTTCHH--HHHHHHHHHHTT-GGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTC
T ss_pred HHHHHHHHHHHHHHCCHH--HHHHHHHHHHHH-HhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCc
Confidence 336788999999999999 999999999988 65422 23456788999999999999999999999999988765542
Q ss_pred -----hHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHH
Q psy7457 142 -----EHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVIT 216 (497)
Q Consensus 142 -----~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ 216 (497)
.-.+.++..|..+|+|++|++.+.+.-... ... ++.. .-.....-||.+
T Consensus 178 ~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~--~~~---------------------~~~~---~~~~~~~~lg~~ 231 (378)
T 3q15_A 178 SIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELA--MDI---------------------QNDR---FIAISLLNIANS 231 (378)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH--HHT---------------------TCHH---HHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH--HHc---------------------CCHH---HHHHHHHHHHHH
Confidence 347789999999999999999998866422 100 0100 034567889999
Q ss_pred HhhcCCCCchhHHhhcc-c-----cCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHHHHH
Q psy7457 217 LVHLRSETQFPTLLASL-K-----FDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAVQVL 290 (497)
Q Consensus 217 ll~Lg~~~~~~~l~~~l-~-----e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al~~l 290 (497)
...+|+.+.+...+... . .++.. +. .+ ..+|.+|...|++++|+.+|
T Consensus 232 y~~~~~~~~A~~~~~~al~~~~~~~~~~~-~~--~~------------------------~~la~~~~~~g~~~~A~~~~ 284 (378)
T 3q15_A 232 YDRSGDDQMAVEHFQKAAKVSREKVPDLL-PK--VL------------------------FGLSWTLCKAGQTQKAFQFI 284 (378)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHHHCGGGH-HH--HH------------------------HHHHHHHHHTTCHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHHHHHhhCChhH-HH--HH------------------------HHHHHHHHHCCCHHHHHHHH
Confidence 99999988877776554 3 23322 44 55 89999999999999999999
Q ss_pred HHHhcC
Q psy7457 291 VLLVSS 296 (497)
Q Consensus 291 ~~L~~~ 296 (497)
...+..
T Consensus 285 ~~al~~ 290 (378)
T 3q15_A 285 EEGLDH 290 (378)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 987764
No 98
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.47 E-value=2.2e-06 Score=71.59 Aligned_cols=102 Identities=16% Similarity=0.062 Sum_probs=92.6
Q ss_pred CCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccC
Q psy7457 58 SKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAH 137 (497)
Q Consensus 58 ~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~ 137 (497)
.+|.+...++..+..+...|++. +|++.|++.++. .|.+. .+...+|.+|...|+.++|+..++.++...|+
T Consensus 4 ~~~~~~~~~~~~g~~~~~~~~~~--~A~~~~~~al~~-~~~~~-----~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~ 75 (137)
T 3q49_B 4 MKSPSAQELKEQGNRLFVGRKYP--EAAACYGRAITR-NPLVA-----VYYTNRALCYLKMQQPEQALADCRRALELDGQ 75 (137)
T ss_dssp --CCCHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred CccccHHHHHHHHHHHHHhCcHH--HHHHHHHHHHhh-CcCcH-----HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCch
Confidence 36778999999999999999999 999999999999 88874 68889999999999999999999999999987
Q ss_pred CCChhHHHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 138 LIRPEHCNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 138 ~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
...-...++.+|..+|+|++|++.+++...
T Consensus 76 --~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 105 (137)
T 3q49_B 76 --SVKAHFFLGQCQLEMESYDEAIANLQRAYS 105 (137)
T ss_dssp --CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred --hHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 466788999999999999999999988765
No 99
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=98.47 E-value=2.1e-06 Score=69.29 Aligned_cols=117 Identities=12% Similarity=0.072 Sum_probs=99.3
Q ss_pred cCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHH
Q psy7457 30 INPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLST 109 (497)
Q Consensus 30 ~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k 109 (497)
.++++|+-+|.+++. .+|.+...+...+.++.+.|++. +|++.|+++++. .|.+. .+..
T Consensus 15 ~~~~~A~~~~~~~~~-------------~~~~~~~~~~~~a~~~~~~~~~~--~A~~~~~~~~~~-~~~~~-----~~~~ 73 (136)
T 2fo7_A 15 GDYDEAIEYYQKALE-------------LDPRSAEAWYNLGNAYYKQGDYD--EAIEYYQKALEL-DPRSA-----EAWY 73 (136)
T ss_dssp TCHHHHHHHHHHHHH-------------HCTTCHHHHHHHHHHHHHHTCHH--HHHHHHHHHHHH-CTTCH-----HHHH
T ss_pred CcHHHHHHHHHHHHH-------------cCCcchhHHHHHHHHHHHhcCHH--HHHHHHHHHHHH-CCCch-----HHHH
Confidence 455666666666554 36778899999999999999999 999999999999 88764 5677
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 110 RAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 110 ~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
.+|.+|...|+.++|+..++.++...|.. ..-...++.++...|++++|++.+++...
T Consensus 74 ~l~~~~~~~~~~~~A~~~~~~~~~~~~~~--~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 131 (136)
T 2fo7_A 74 NLGNAYYKQGDYDEAIEYYQKALELDPRS--AEAWYNLGNAYYKQGDYDEAIEYYQKALE 131 (136)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHCTTC--HHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhCCCC--hHHHHHHHHHHHHHccHHHHHHHHHHHHc
Confidence 89999999999999999999999998864 45567889999999999999999987653
No 100
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=98.47 E-value=1.6e-06 Score=76.06 Aligned_cols=102 Identities=11% Similarity=0.043 Sum_probs=92.8
Q ss_pred CCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccC
Q psy7457 58 SKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAH 137 (497)
Q Consensus 58 ~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~ 137 (497)
.++++.+.++.++..|.+.|++. +|++.|++.++. .|.+. .+...+|.+|...|++++|+..|++++...|.
T Consensus 6 ~~~~~a~~~~~~g~~~~~~g~~~--~A~~~~~~al~~-~p~~~-----~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~ 77 (164)
T 3sz7_A 6 APTPESDKLKSEGNAAMARKEYS--KAIDLYTQALSI-APANP-----IYLSNRAAAYSASGQHEKAAEDAELATVVDPK 77 (164)
T ss_dssp SCCHHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-STTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred hhhhhHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHh-CCcCH-----HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC
Confidence 46788999999999999999999 999999999999 88874 68889999999999999999999999999987
Q ss_pred CCChhHHHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 138 LIRPEHCNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 138 ~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
. ..-...++.+|..+|+|++|++.+++...
T Consensus 78 ~--~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 107 (164)
T 3sz7_A 78 Y--SKAWSRLGLARFDMADYKGAKEAYEKGIE 107 (164)
T ss_dssp C--HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred C--HHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 4 66788899999999999999999988764
No 101
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=98.46 E-value=1.8e-06 Score=72.00 Aligned_cols=100 Identities=12% Similarity=0.101 Sum_probs=90.3
Q ss_pred CccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCC
Q psy7457 60 DTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLI 139 (497)
Q Consensus 60 p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f 139 (497)
|.+.+.+..++..+.+.|++. +|++.|++.++. .|.+. .+...+|.+|...|++++|+..+++++...|+.
T Consensus 1 p~~a~~~~~~g~~~~~~~~~~--~A~~~~~~al~~-~p~~~-----~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~- 71 (126)
T 3upv_A 1 SMKAEEARLEGKEYFTKSDWP--NAVKAYTEMIKR-APEDA-----RGYSNRAAALAKLMSFPEAIADCNKAIEKDPNF- 71 (126)
T ss_dssp CHHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-
T ss_pred CchHHHHHHHHHHHHHhcCHH--HHHHHHHHHHHh-CCCCh-----HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc-
Confidence 455778899999999999999 999999999999 88875 688899999999999999999999999999865
Q ss_pred ChhHHHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 140 RPEHCNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 140 ~~~~vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
..-...++.++..+|+|++|++.+++...
T Consensus 72 -~~~~~~lg~~~~~~~~~~~A~~~~~~al~ 100 (126)
T 3upv_A 72 -VRAYIRKATAQIAVKEYASALETLDAART 100 (126)
T ss_dssp -HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 56678899999999999999999988664
No 102
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=98.46 E-value=3.3e-07 Score=80.56 Aligned_cols=118 Identities=12% Similarity=0.020 Sum_probs=93.0
Q ss_pred ChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHH
Q psy7457 10 NPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQ 89 (497)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~ 89 (497)
+|..|+.++++-.. ..+.++|+-+|.+++. .+|++.+.+..++.+|.++|++. +|+..|+
T Consensus 30 ~~~~~~~la~~y~~-----~~~~~~A~~~~~~al~-------------~~p~~~~a~~~lg~~~~~~~~~~--~A~~~~~ 89 (150)
T 4ga2_A 30 KSIKGFYFAKLYYE-----AKEYDLAKKYICTYIN-------------VQERDPKAHRFLGLLYELEENTD--KAVECYR 89 (150)
T ss_dssp HHTTHHHHHHHHHH-----TTCHHHHHHHHHHHHH-------------HCTTCHHHHHHHHHHHHHTTCHH--HHHHHHH
T ss_pred cHHHHHHHHHHHHH-----cCCHHHHHHHHHHHHH-------------hCCCCHHHHHHHHHHHHHcCchH--HHHHHHH
Confidence 34455555554433 3455666666666665 48999999999999999999999 9999999
Q ss_pred HHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHH-HHHHHHHccCCCChhHHHHHHHHHHhhc
Q psy7457 90 RYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASS-LAIAFQYSAHLIRPEHCNLYLEVLLELK 155 (497)
Q Consensus 90 ~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~-le~a~~~~~~~f~~~~vNiLaEL~i~~k 155 (497)
+.++. .|.+. ++...+|.+|.+.|+.++|+.. ++++++-.|.. ..-.++...|+...|
T Consensus 90 ~al~~-~p~~~-----~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~--~~~~~l~~~ll~~~G 148 (150)
T 4ga2_A 90 RSVEL-NPTQK-----DLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGS--PAVYKLKEQLLDCEG 148 (150)
T ss_dssp HHHHH-CTTCH-----HHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTC--HHHHHHHHHHHHTCC
T ss_pred HHHHh-CCCCH-----HHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCC--HHHHHHHHHHHHHhC
Confidence 99999 99885 7888999999999999988876 59999999965 455677777776555
No 103
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=98.46 E-value=9.1e-07 Score=77.57 Aligned_cols=111 Identities=6% Similarity=-0.067 Sum_probs=96.3
Q ss_pred cCCCCCChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhH
Q psy7457 4 TGQSYENPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGF 83 (497)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~ 83 (497)
++..-.+++.|+.+++..+. ..+.++|+-+|.+++.. +|++...+..++.+|.++|++. +
T Consensus 4 ~~~~~~~a~~~~~~g~~~~~-----~g~~~~A~~~~~~al~~-------------~p~~~~~~~~l~~~~~~~g~~~--~ 63 (164)
T 3sz7_A 4 SMAPTPESDKLKSEGNAAMA-----RKEYSKAIDLYTQALSI-------------APANPIYLSNRAAAYSASGQHE--K 63 (164)
T ss_dssp CSSCCHHHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHH-------------STTCHHHHHHHHHHHHHTTCHH--H
T ss_pred cchhhhhHHHHHHHHHHHHH-----cCCHHHHHHHHHHHHHh-------------CCcCHHHHHHHHHHHHHccCHH--H
Confidence 45555678888888877664 45677888888888774 7889999999999999999999 9
Q ss_pred HHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCC
Q psy7457 84 VLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIR 140 (497)
Q Consensus 84 Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~ 140 (497)
|++.|++.++. .|.+. .+...+|.+|...|++++|+..|++++...|+...
T Consensus 64 A~~~~~~al~~-~p~~~-----~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~ 114 (164)
T 3sz7_A 64 AAEDAELATVV-DPKYS-----KAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGS 114 (164)
T ss_dssp HHHHHHHHHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCC
T ss_pred HHHHHHHHHHh-CCCCH-----HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchH
Confidence 99999999999 88874 68889999999999999999999999999998754
No 104
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=98.46 E-value=9.4e-07 Score=77.90 Aligned_cols=107 Identities=13% Similarity=0.065 Sum_probs=95.0
Q ss_pred HhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHH-HHhcCCH--HHHHHHHH
Q psy7457 53 IQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHV-YHTARNF--PQAASSLA 129 (497)
Q Consensus 53 ~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~-Y~e~~~~--~~Ai~~le 129 (497)
.++...+|++.+.++..+.+|...|++. +|++.|++.++. .|.+. .+...+|.+ |...|+. ++|+..++
T Consensus 34 ~~al~~~p~~~~~~~~lg~~~~~~~~~~--~A~~~~~~al~~-~p~~~-----~~~~~la~~l~~~~~~~~~~~A~~~~~ 105 (177)
T 2e2e_A 34 QDKIRANPQNSEQWALLGEYYLWQNDYS--NSLLAYRQALQL-RGENA-----ELYAALATVLYYQASQHMTAQTRAMID 105 (177)
T ss_dssp HHHHHHCCSCHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-HCSCH-----HHHHHHHHHHHHHTTTCCCHHHHHHHH
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHc-CCCCH-----HHHHHHHHHHHHhcCCcchHHHHHHHH
Confidence 3334458999999999999999999999 999999999999 88774 677899999 8899998 99999999
Q ss_pred HHHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 130 IAFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 130 ~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
.++...|.. ..-...++.+|...|+|++|+..+++...
T Consensus 106 ~al~~~p~~--~~~~~~la~~~~~~g~~~~A~~~~~~al~ 143 (177)
T 2e2e_A 106 KALALDSNE--ITALMLLASDAFMQANYAQAIELWQKVMD 143 (177)
T ss_dssp HHHHHCTTC--HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHhCCCc--HHHHHHHHHHHHHcccHHHHHHHHHHHHh
Confidence 999999864 56678899999999999999999988764
No 105
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.45 E-value=1.5e-06 Score=71.13 Aligned_cols=122 Identities=9% Similarity=0.001 Sum_probs=100.2
Q ss_pred CCCCChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHH
Q psy7457 6 QSYENPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVL 85 (497)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al 85 (497)
..-.++..|+.+++.... ..++++|+-+|.+++.. +|++...+..++.+|.+.|++. +|+
T Consensus 11 ~~~~~~~~~~~~~~~~~~-----~~~~~~A~~~~~~al~~-------------~~~~~~~~~~la~~~~~~~~~~--~A~ 70 (133)
T 2lni_A 11 MNPDLALMVKNKGNECFQ-----KGDYPQAMKHYTEAIKR-------------NPKDAKLYSNRAACYTKLLEFQ--LAL 70 (133)
T ss_dssp SSSCHHHHHHHHHHHHHH-----TTCSHHHHHHHHHHHTT-------------CTTCHHHHHHHHHHHTTTTCHH--HHH
T ss_pred cCcccHHHHHHHHHHHHH-----cCCHHHHHHHHHHHHHc-------------CCCcHHHHHHHHHHHHHhccHH--HHH
Confidence 345567778777766543 45678888888888774 7888999999999999999999 999
Q ss_pred HHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhhc
Q psy7457 86 AGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLELK 155 (497)
Q Consensus 86 ~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k 155 (497)
+.|++.++. .|.+. .+...+|.+|...|+.++|+..+++++...|.. ......++.++..++
T Consensus 71 ~~~~~a~~~-~~~~~-----~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~--~~~~~~l~~~~~~~~ 132 (133)
T 2lni_A 71 KDCEECIQL-EPTFI-----KGYTRKAAALEAMKDYTKAMDVYQKALDLDSSC--KEAADGYQRCMMAQY 132 (133)
T ss_dssp HHHHHHHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGG--THHHHHHHHHHHHHT
T ss_pred HHHHHHHHh-CCCch-----HHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCc--hHHHHHHHHHHHHhc
Confidence 999999999 88774 678899999999999999999999999999864 344556666666554
No 106
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=98.44 E-value=4.3e-07 Score=81.54 Aligned_cols=103 Identities=8% Similarity=-0.096 Sum_probs=87.2
Q ss_pred ChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHH
Q psy7457 10 NPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQ 89 (497)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~ 89 (497)
+|+.|+.++..... ...+++|+=+|.+++. .+|+|..++..++.+|.++|++. +|++.|+
T Consensus 35 ~~~~~~~lg~~~~~-----~g~~~eA~~~~~~al~-------------~~P~~~~~~~~lg~~~~~~g~~~--~Ai~~~~ 94 (151)
T 3gyz_A 35 MMDDIYSYAYDFYN-----KGRIEEAEVFFRFLCI-------------YDFYNVDYIMGLAAIYQIKEQFQ--QAADLYA 94 (151)
T ss_dssp HHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHH-------------HCTTCHHHHHHHHHHHHHTTCHH--HHHHHHH
T ss_pred HHHHHHHHHHHHHH-----cCCHHHHHHHHHHHHH-------------hCCCCHHHHHHHHHHHHHHccHH--HHHHHHH
Confidence 45566666655433 3456677777776666 49999999999999999999999 9999999
Q ss_pred HHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCC
Q psy7457 90 RYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHL 138 (497)
Q Consensus 90 ~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~ 138 (497)
+.++. .|.+. .+.-.+|.+|..+|+.++|+..|++++...|+.
T Consensus 95 ~al~l-~P~~~-----~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~ 137 (151)
T 3gyz_A 95 VAFAL-GKNDY-----TPVFHTGQCQLRLKAPLKAKECFELVIQHSNDE 137 (151)
T ss_dssp HHHHH-SSSCC-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCH
T ss_pred HHHhh-CCCCc-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCH
Confidence 99999 99887 677899999999999999999999999999853
No 107
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.42 E-value=8.3e-07 Score=71.92 Aligned_cols=123 Identities=10% Similarity=-0.011 Sum_probs=100.4
Q ss_pred CCCChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHH
Q psy7457 7 SYENPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLA 86 (497)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~ 86 (497)
.-.++..|+.+++.... ..++++|+-+|.+++.. +|++...+..++.+|...|++. +|++
T Consensus 8 ~~~~~~~~~~~~~~~~~-----~~~~~~A~~~~~~~~~~-------------~~~~~~~~~~~a~~~~~~~~~~--~A~~ 67 (131)
T 2vyi_A 8 DSAEAERLKTEGNEQMK-----VENFEAAVHFYGKAIEL-------------NPANAVYFCNRAAAYSKLGNYA--GAVQ 67 (131)
T ss_dssp HHHHHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHH-------------CTTCHHHHHHHHHHHHHTTCHH--HHHH
T ss_pred chhhhHHHHHHHHHHHH-----ccCHHHHHHHHHHHHHc-------------CCCCHHHHHHHHHHHHHhhchH--HHHH
Confidence 33456667766665543 34667777777777763 7888999999999999999999 9999
Q ss_pred HHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhhccH
Q psy7457 87 GYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLELKRY 157 (497)
Q Consensus 87 ~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k~y 157 (497)
.|++.++. .|.+. .+...+|.+|...|+.++|+..++.++...|+. ..-...++.++...|+|
T Consensus 68 ~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~--~~~~~~l~~~~~~~~~~ 130 (131)
T 2vyi_A 68 DCERAICI-DPAYS-----KAYGRMGLALSSLNKHVEAVAYYKKALELDPDN--ETYKSNLKIAELKLREA 130 (131)
T ss_dssp HHHHHHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC--HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhc-CccCH-----HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccc--hHHHHHHHHHHHHHhcC
Confidence 99999999 88774 678899999999999999999999999999864 45567777888777764
No 108
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=98.42 E-value=5.1e-06 Score=67.02 Aligned_cols=128 Identities=11% Similarity=0.086 Sum_probs=105.8
Q ss_pred HHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhH
Q psy7457 64 DNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEH 143 (497)
Q Consensus 64 ~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~ 143 (497)
+.+...+..|...|++. +|++.|+++++. .|.+. .....+|..|...|+.++|+..+++++...|.. ..-
T Consensus 2 ~~~~~l~~~~~~~~~~~--~A~~~~~~~~~~-~~~~~-----~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~--~~~ 71 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYD--EAIEYYQKALEL-DPRSA-----EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS--AEA 71 (136)
T ss_dssp HHHHHHHHHHHHHTCHH--HHHHHHHHHHHH-CTTCH-----HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC--HHH
T ss_pred cHHHHHHHHHHHcCcHH--HHHHHHHHHHHc-CCcch-----hHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCc--hHH
Confidence 35677899999999999 999999999999 88763 577789999999999999999999999998864 455
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCC
Q psy7457 144 CNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSE 223 (497)
Q Consensus 144 vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~ 223 (497)
...++.++...|+|++|++.+.+..... |. ..+....+|.++..+|+.
T Consensus 72 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~--------------------------~~------~~~~~~~la~~~~~~~~~ 119 (136)
T 2fo7_A 72 WYNLGNAYYKQGDYDEAIEYYQKALELD--------------------------PR------SAEAWYNLGNAYYKQGDY 119 (136)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHC--------------------------TT------CHHHHHHHHHHHHTTTCH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhC--------------------------CC------ChHHHHHHHHHHHHHccH
Confidence 7788999999999999999998866421 22 245667888899999988
Q ss_pred CchhHHhhcc
Q psy7457 224 TQFPTLLASL 233 (497)
Q Consensus 224 ~~~~~l~~~l 233 (497)
+.+...+...
T Consensus 120 ~~A~~~~~~~ 129 (136)
T 2fo7_A 120 DEAIEYYQKA 129 (136)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8877776544
No 109
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=98.42 E-value=1.2e-06 Score=77.11 Aligned_cols=105 Identities=12% Similarity=0.014 Sum_probs=87.8
Q ss_pred hHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHH
Q psy7457 11 PQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQR 90 (497)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~ 90 (497)
+..|+.++...+ +..+.++|+-+|.+++.. +|+|...++.++.+|.++|++. .|++.|++
T Consensus 21 ~~~~~~~g~~~~-----~~g~~~~A~~~~~~al~~-------------~p~~~~~~~~lg~~~~~~g~~~--~A~~~~~~ 80 (148)
T 2vgx_A 21 LEQLYSLAFNQY-----QSGXYEDAHXVFQALCVL-------------DHYDSRFFLGLGACRQAMGQYD--LAIHSYSY 80 (148)
T ss_dssp HHHHHHHHHHHH-----HTTCHHHHHHHHHHHHHH-------------CTTCHHHHHHHHHHHHHTTCHH--HHHHHHHH
T ss_pred HHHHHHHHHHHH-----HcCChHHHHHHHHHHHHc-------------CcccHHHHHHHHHHHHHHhhHH--HHHHHHHH
Confidence 345555554443 345677788777777764 8999999999999999999999 99999999
Q ss_pred HHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCCh
Q psy7457 91 YLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRP 141 (497)
Q Consensus 91 il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~ 141 (497)
+++. .|.+. .+.-.+|.+|...|+.++|+..|++++...|+.-.+
T Consensus 81 al~l-~p~~~-----~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 125 (148)
T 2vgx_A 81 GAVM-DIXEP-----RFPFHAAECLLQXGELAEAESGLFLAQELIANXPEF 125 (148)
T ss_dssp HHHH-STTCT-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCGGG
T ss_pred HHhc-CCCCc-----hHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCCcc
Confidence 9999 99886 577899999999999999999999999999875443
No 110
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.41 E-value=2.5e-06 Score=71.38 Aligned_cols=107 Identities=14% Similarity=0.056 Sum_probs=94.6
Q ss_pred cCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHc
Q psy7457 56 GLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYS 135 (497)
Q Consensus 56 ~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~ 135 (497)
...+|++...+..++..+.+.|++. +|++.|++.++. .|.+. ....+...+|..|...|++++|+..++.++...
T Consensus 21 ~~~~~~~~~~~~~~a~~~~~~~~~~--~A~~~~~~a~~~-~~~~~--~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 95 (148)
T 2dba_A 21 ATPGASSVEQLRKEGNELFKCGDYG--GALAAYTQALGL-DATPQ--DQAVLHRNRAACHLKLEDYDKAETEASKAIEKD 95 (148)
T ss_dssp CCTTCCCHHHHHHHHHHHHTTTCHH--HHHHHHHHHHTS-CCCHH--HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred CccchHHHHHHHHHHHHHHHhCCHH--HHHHHHHHHHHH-cccch--HHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhC
Confidence 4457889999999999999999999 999999999999 88651 224688899999999999999999999999999
Q ss_pred cCCCChhHHHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 136 AHLIRPEHCNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 136 ~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
|.. ..-...++.+|...++|++|++.+++...
T Consensus 96 ~~~--~~~~~~~a~~~~~~~~~~~A~~~~~~al~ 127 (148)
T 2dba_A 96 GGD--VKALYRRSQALEKLGRLDQAVLDLQRCVS 127 (148)
T ss_dssp SCC--HHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred ccC--HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 865 56678899999999999999999988664
No 111
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.38 E-value=4.2e-06 Score=99.06 Aligned_cols=234 Identities=12% Similarity=0.076 Sum_probs=153.2
Q ss_pred cccCCccceehhhcccCcch--------hhhHHHhhcCCCCccHHHHHHH---------HHHHHHhCCcchhHHHHHHHH
Q psy7457 28 QVINPDESRYILSRVRTPKK--------IEHILIQRGLSKDTILDNRARR---------LRLCDEIGLKNRGFVLAGYQR 90 (497)
Q Consensus 28 ~~~~~~~~~y~~~r~~~~~~--------~~~~~~~~~~~~p~n~~~~~~R---------A~Ly~elG~~~~~~Al~~y~~ 90 (497)
....|.+++-.|-|.+.-+. +-.+..-|++.|+.....+..| |.++.++|++. .|.+.|++
T Consensus 997 ~aglp~EaieLLEKivl~~s~fs~n~~LqnlLi~tAIkaD~~Rv~eyI~kLd~~d~~eIA~Iai~lglyE--EAf~IYkK 1074 (1630)
T 1xi4_A 997 TADLPNELIELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFE--EAFAIFRK 1074 (1630)
T ss_pred hCCCHHHHHHHHHHHHcCCCcccccHHHHHHHHHHHHHhChhhHHHHHHHhhhccHHHHHHHHHhCCCHH--HHHHHHHH
Confidence 35678889999999883322 1122255778899999999888 89999999988 88888877
Q ss_pred HHhccCCCCChhhH-------------------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHH
Q psy7457 91 YLKNITPDSDPQTI-------------------LDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVL 151 (497)
Q Consensus 91 il~~~~P~d~~~~~-------------------~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~ 151 (497)
.-.. .+.-+.+ -++--.+|+.|-+.|++++||+.|+++ =+++.+.=.++-+
T Consensus 1075 a~~~---~~A~~VLie~i~nldrAiE~Aervn~p~vWsqLAKAql~~G~~kEAIdsYiKA-------dD~say~eVa~~~ 1144 (1630)
T 1xi4_A 1075 FDVN---TSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKA-------DDPSSYMEVVQAA 1144 (1630)
T ss_pred cCCH---HHHHHHHHHHHhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCHHHHHHHHHhc-------CChHHHHHHHHHH
Confidence 5322 1100000 023346778888888888888888775 2345555578888
Q ss_pred HhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhh
Q psy7457 152 LELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLA 231 (497)
Q Consensus 152 i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~ 231 (497)
...|+|+++++.+.. ++-. .|+ ..+-..+|.|+-+++..++.+..+
T Consensus 1145 ~~lGkyEEAIeyL~m-Ark~-------------------------~~e-------~~Idt~LafaYAKl~rleele~fI- 1190 (1630)
T 1xi4_A 1145 NTSGNWEELVKYLQM-ARKK-------------------------ARE-------SYVETELIFALAKTNRLAELEEFI- 1190 (1630)
T ss_pred HHcCCHHHHHHHHHH-HHhh-------------------------ccc-------ccccHHHHHHHHhhcCHHHHHHHH-
Confidence 888888888888865 3211 011 112235889999997766544442
Q ss_pred ccccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHHHHHHHHhcCCCCChHHHHHHHHHH
Q psy7457 232 SLKFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAVQVLVLLVSSEKYNQPGVWKQLAET 311 (497)
Q Consensus 232 ~l~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al~~l~~L~~~~~y~~~~vwl~lAeC 311 (497)
.++ ..++ + ..+|++|.+.|+|.+|+.+|... .-|.++|.|
T Consensus 1191 ---~~~-n~ad--~-------------------------~~iGd~le~eg~YeeA~~~Y~kA---------~ny~rLA~t 1230 (1630)
T 1xi4_A 1191 ---NGP-NNAH--I-------------------------QQVGDRCYDEKMYDAAKLLYNNV---------SNFGRLAST 1230 (1630)
T ss_pred ---hCC-CHHH--H-------------------------HHHHHHHHhcCCHHHHHHHHHhh---------hHHHHHHHH
Confidence 111 2234 3 56999999999999999999873 479999999
Q ss_pred HHHhhhccCcccccccCCCchHHHHHHHhhhhhccc
Q psy7457 312 YEKSECLSGVVVSTVDTGSGSWWFQSMSSAMCSTVL 347 (497)
Q Consensus 312 y~~l~~l~~~~~~~~d~~~~~~w~~~~~~~~~~~~~ 347 (497)
|.+++.++..+..+--+.+.+-|...+.++.....|
T Consensus 1231 LvkLge~q~AIEaarKA~n~~aWkev~~acve~~Ef 1266 (1630)
T 1xi4_A 1231 LVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEF 1266 (1630)
T ss_pred HHHhCCHHHHHHHHHHhCCHHHHHHHHHHHhhhhHH
Confidence 999987652221111112445587766655433333
No 112
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=98.37 E-value=7.5e-07 Score=76.45 Aligned_cols=106 Identities=11% Similarity=-0.040 Sum_probs=89.6
Q ss_pred CCCChHH---HHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhH
Q psy7457 7 SYENPQE---YYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGF 83 (497)
Q Consensus 7 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~ 83 (497)
.|=||+. |....|..+. ..+.++|+-+|.+++.. +|++...+..++.+|.++|++. +
T Consensus 6 a~inP~~a~~~~~~G~~~~~-----~g~~~~A~~~~~~al~~-------------~p~~~~~~~~~~~~~~~~~~~~--~ 65 (126)
T 4gco_A 6 AYINPELAQEEKNKGNEYFK-----KGDYPTAMRHYNEAVKR-------------DPENAILYSNRAACLTKLMEFQ--R 65 (126)
T ss_dssp -CCCHHHHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHH-------------CTTCHHHHHHHHHHHHHTTCHH--H
T ss_pred HHHCHHHHHHHHHHHHHHHH-----cCCHHHHHHHHHHHHHh-------------CCCCHHHHHHHhhHHHhhccHH--H
Confidence 3556753 5555555444 34677888888888874 8999999999999999999999 9
Q ss_pred HHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCC
Q psy7457 84 VLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHL 138 (497)
Q Consensus 84 Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~ 138 (497)
|++.|++.++. -|.+. .+.-.+|.+|..+|++++|++.|+++++..|+.
T Consensus 66 A~~~~~~al~~-~p~~~-----~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~ 114 (126)
T 4gco_A 66 ALDDCDTCIRL-DSKFI-----KGYIRKAACLVAMREWSKAQRAYEDALQVDPSN 114 (126)
T ss_dssp HHHHHHHHHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHh-hhhhh-----HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcCC
Confidence 99999999999 88874 678899999999999999999999999999965
No 113
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=98.37 E-value=1.8e-06 Score=74.30 Aligned_cols=105 Identities=13% Similarity=-0.024 Sum_probs=86.1
Q ss_pred hHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHH
Q psy7457 11 PQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQR 90 (497)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~ 90 (497)
++.|+.++...+. ..+.++|+=+|.+++. .+|+|...++.++.+|.+.|++. .|++.|++
T Consensus 18 ~~~~~~~a~~~~~-----~g~~~~A~~~~~~al~-------------~~p~~~~~~~~lg~~~~~~g~~~--~A~~~~~~ 77 (142)
T 2xcb_A 18 LEQLYALGFNQYQ-----AGKWDDAQKIFQALCM-------------LDHYDARYFLGLGACRQSLGLYE--QALQSYSY 77 (142)
T ss_dssp HHHHHHHHHHHHH-----TTCHHHHHHHHHHHHH-------------HCTTCHHHHHHHHHHHHHTTCHH--HHHHHHHH
T ss_pred HHHHHHHHHHHHH-----HccHHHHHHHHHHHHH-------------hCCccHHHHHHHHHHHHHHhhHH--HHHHHHHH
Confidence 4455555544433 3456666666666655 48999999999999999999999 99999999
Q ss_pred HHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCCh
Q psy7457 91 YLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRP 141 (497)
Q Consensus 91 il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~ 141 (497)
.++. .|.+. .+.-.+|.+|...|+.++|+..|+.++...|+.-.+
T Consensus 78 al~~-~p~~~-----~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 122 (142)
T 2xcb_A 78 GALM-DINEP-----RFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAH 122 (142)
T ss_dssp HHHH-CTTCT-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCGGG
T ss_pred HHhc-CCCCc-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCcch
Confidence 9999 99886 577799999999999999999999999999865443
No 114
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.37 E-value=5.9e-06 Score=80.53 Aligned_cols=184 Identities=8% Similarity=-0.054 Sum_probs=133.8
Q ss_pred HHHH-HHHHHHhCCcchhHHHHHHHHHHhccCCCCC-hhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCCh--
Q psy7457 66 RARR-LRLCDEIGLKNRGFVLAGYQRYLKNITPDSD-PQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRP-- 141 (497)
Q Consensus 66 ~~~R-A~Ly~elG~~~~~~Al~~y~~il~~~~P~d~-~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~-- 141 (497)
.+.+ +.+|...|++. +|++.|++.+.. .|... ..........++.+|...|++++|++.|+++++-++...+.
T Consensus 38 ~~~~a~~~~~~~g~~~--~A~~~~~~al~~-~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~ 114 (307)
T 2ifu_A 38 EYAKAAVAFKNAKQLE--QAKDAYLQEAEA-HANNRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDT 114 (307)
T ss_dssp HHHHHHHHHHHTTCHH--HHHHHHHHHHHH-HHHTTCHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHH
T ss_pred HHHHHHHHHHHcCCHH--HHHHHHHHHHHH-HHHcCCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHH
Confidence 4444 57899999999 999999999998 66432 33456788999999999999999999999999988765543
Q ss_pred --hHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhh
Q psy7457 142 --EHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVH 219 (497)
Q Consensus 142 --~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~ 219 (497)
..++-++.+|.. |+|++|+...++...+.- .. ++. ..-.+...++|.++..
T Consensus 115 ~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~--~~----------------------~~~--~~~~~~~~~lg~~~~~ 167 (307)
T 2ifu_A 115 AAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFE--NE----------------------ERL--RQAAELIGKASRLLVR 167 (307)
T ss_dssp HHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHH--HT----------------------TCH--HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHH--hC----------------------CCh--hHHHHHHHHHHHHHHH
Confidence 346778889988 999999999988775321 00 010 0025677899999999
Q ss_pred cCCCCchhHHhhcc-ccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHHHHHHHHhcCCC
Q psy7457 220 LRSETQFPTLLASL-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAVQVLVLLVSSEK 298 (497)
Q Consensus 220 Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al~~l~~L~~~~~ 298 (497)
+|+.+.+...+... ...+ +.++ -+ -....++-.|.++...|.|.+|+.+|...+..+.
T Consensus 168 ~g~~~~A~~~~~~al~~~~-~~~~--~~------------------~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~p~ 226 (307)
T 2ifu_A 168 QQKFDEAAASLQKEKSMYK-EMEN--YP------------------TCYKKCIAQVLVQLHRADYVAAQKCVRESYSIPG 226 (307)
T ss_dssp TTCHHHHHHHHHHHHHHHH-HTTC--HH------------------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTT
T ss_pred cCCHHHHHHHHHHHHHHHH-HcCC--hh------------------HHHHHHHHHHHHHHHcCCHHHHHHHHHHHhCCCC
Confidence 99988877776544 2211 1111 00 0001238899999999999999999999884444
Q ss_pred CC
Q psy7457 299 YN 300 (497)
Q Consensus 299 y~ 300 (497)
+.
T Consensus 227 ~~ 228 (307)
T 2ifu_A 227 FS 228 (307)
T ss_dssp ST
T ss_pred CC
Confidence 43
No 115
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.37 E-value=1.4e-07 Score=94.58 Aligned_cols=215 Identities=13% Similarity=0.047 Sum_probs=165.3
Q ss_pred HHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHH-------HHHHHHhCCcchhHHHHHHHHH
Q psy7457 19 NLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARR-------LRLCDEIGLKNRGFVLAGYQRY 91 (497)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~R-------A~Ly~elG~~~~~~Al~~y~~i 91 (497)
++.=+-++-+..++.+|+-+|-++... ||+..+.+..| ..++..+++.. .++..+++-
T Consensus 9 ~~~~~~~~~~~~d~~~A~~~F~~a~~~-------------dP~~~Daw~g~~a~g~~~~~~L~~~~r~~--~a~~~~~~~ 73 (282)
T 4f3v_A 9 SLFESAVSMLPMSEARSLDLFTEITNY-------------DESACDAWIGRIRCGDTDRVTLFRAWYSR--RNFGQLSGS 73 (282)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHH-------------CTTCHHHHHHHHHTTCCCHHHHHHHHHTG--GGTTHHHHT
T ss_pred HHHHHHhcccCCCHHHHHHHHHHHHHh-------------ChhhhHHHHhHHHccCCcHHHHHHHHHHH--HHHHHHHHH
Confidence 333333344677888888887777775 99999999999 79999999999 999999999
Q ss_pred HhccCCCCChhhH----------------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhhc
Q psy7457 92 LKNITPDSDPQTI----------------LDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLELK 155 (497)
Q Consensus 92 l~~~~P~d~~~~~----------------~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k 155 (497)
+.+ -|..-+-++ -++.-..|..+++.|++++|.++|+......|+.+ ..-.++-++++.+
T Consensus 74 l~l-~p~~l~a~~~~~g~y~~~~~~v~~r~dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~~---~~~~~a~l~~~~~ 149 (282)
T 4f3v_A 74 VQI-SMSTLNARIAIGGLYGDITYPVTSPLAITMGFAACEAAQGNYADAMEALEAAPVAGSEHL---VAWMKAVVYGAAE 149 (282)
T ss_dssp TTC-CGGGGCCEEECCTTTCCCEEECSSHHHHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCHHH---HHHHHHHHHHHTT
T ss_pred hcC-ChhhhhhhhccCCcccccccccCCHhHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCchH---HHHHHHHHHHHcC
Confidence 996 443321111 36777899999999999999999999888777655 5566777999999
Q ss_pred cHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhcc-c
Q psy7457 156 RYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLASL-K 234 (497)
Q Consensus 156 ~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l-~ 234 (497)
+|.+|+..++....+ |+.. ++-++++.||.++..||..+++...++.. .
T Consensus 150 r~~dA~~~l~~a~~~---------------------------~d~~---~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~ 199 (282)
T 4f3v_A 150 RWTDVIDQVKSAGKW---------------------------PDKF---LAGAAGVAHGVAAANLALFTEAERRLTEAND 199 (282)
T ss_dssp CHHHHHHHHTTGGGC---------------------------SCHH---HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHhhcc---------------------------CCcc---cHHHHHHHHHHHHHHCCCHHHHHHHHHHHhc
Confidence 999999999743221 1110 14679999999999999999988887665 3
Q ss_pred cC--cccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHHHHHHHHhcCCCCChHHHHHHHHH
Q psy7457 235 FD--VEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAVQVLVLLVSSEKYNQPGVWKQLAE 310 (497)
Q Consensus 235 e~--~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al~~l~~L~~~~~y~~~~vwl~lAe 310 (497)
.+ |.-..| .. +-.|-|+.+.|..++|...|..+.....- +.++..+..
T Consensus 200 g~~~P~~~~d--a~------------------------~~~glaL~~lGr~deA~~~l~~a~a~~P~--~~~~~aL~~ 249 (282)
T 4f3v_A 200 SPAGEACARA--IA------------------------WYLAMARRSQGNESAAVALLEWLQTTHPE--PKVAAALKD 249 (282)
T ss_dssp STTTTTTHHH--HH------------------------HHHHHHHHHHTCHHHHHHHHHHHHHHSCC--HHHHHHHHC
T ss_pred CCCCccccHH--HH------------------------HHHHHHHHHcCCHHHHHHHHHHHHhcCCc--HHHHHHHhC
Confidence 22 323455 55 88999999999999999999999988775 666655543
No 116
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.36 E-value=5.4e-06 Score=65.98 Aligned_cols=98 Identities=12% Similarity=0.109 Sum_probs=88.5
Q ss_pred cHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCCh
Q psy7457 62 ILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRP 141 (497)
Q Consensus 62 n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~ 141 (497)
+.+.++..+..+...|++. +|++.|++.++. .|.+. .+...+|.+|...|+.++|+..+++++...|+. .
T Consensus 3 ~~~~~~~~~~~~~~~~~~~--~A~~~~~~~~~~-~~~~~-----~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~--~ 72 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNID--DALQCYSEAIKL-DPHNH-----VLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDW--G 72 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-CTTCH-----HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC--H
T ss_pred hHHHHHHHHHHHHHcccHH--HHHHHHHHHHHH-CCCcH-----HHHHHHHHHHHhhccHHHHHHHHHHHHHhCccc--H
Confidence 3678899999999999999 999999999999 88774 688899999999999999999999999999863 5
Q ss_pred hHHHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 142 EHCNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 142 ~~vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
.-...++.++...|+|++|++.+++...
T Consensus 73 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 100 (118)
T 1elw_A 73 KGYSRKAAALEFLNRFEEAKRTYEEGLK 100 (118)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 6678899999999999999999988664
No 117
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=98.36 E-value=3.3e-06 Score=75.86 Aligned_cols=130 Identities=9% Similarity=-0.062 Sum_probs=107.8
Q ss_pred hHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHH
Q psy7457 11 PQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQR 90 (497)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~ 90 (497)
...++..++... ...++++|+-+|.+++.+ +...++.++.+|.+.|++. +|++.|++
T Consensus 6 ~~~~~~~g~~~~-----~~~~~~~A~~~~~~a~~~----------------~~~~~~~lg~~~~~~g~~~--~A~~~~~~ 62 (213)
T 1hh8_A 6 AISLWNEGVLAA-----DKKDWKGALDAFSAVQDP----------------HSRICFNIGCMYTILKNMT--EAEKAFTR 62 (213)
T ss_dssp HHHHHHHHHHHH-----HTTCHHHHHHHHHTSSSC----------------CHHHHHHHHHHHHHTTCHH--HHHHHHHH
T ss_pred HHHHHHHHHHHH-----HhCCHHHHHHHHHHHcCC----------------ChHHHHHHHHHHHHcCCHH--HHHHHHHH
Confidence 334555555443 345677888888887642 4679999999999999999 99999999
Q ss_pred HHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCC--------------ChhHHHHHHHHHHhhcc
Q psy7457 91 YLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLI--------------RPEHCNLYLEVLLELKR 156 (497)
Q Consensus 91 il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f--------------~~~~vNiLaEL~i~~k~ 156 (497)
.++. .|.+. .+...+|.+|...|+.++|++.|++++...|+.- .+.-...++.+|...|+
T Consensus 63 al~~-~~~~~-----~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 136 (213)
T 1hh8_A 63 SINR-DKHLA-----VAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEE 136 (213)
T ss_dssp HHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTC
T ss_pred HHHh-Cccch-----HHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccC
Confidence 9999 88774 6788999999999999999999999999887643 34667889999999999
Q ss_pred HHHHHHHHHHhch
Q psy7457 157 YETCVEVLRRFAN 169 (497)
Q Consensus 157 y~~al~~I~~~~~ 169 (497)
|++|++.+++...
T Consensus 137 ~~~A~~~~~~al~ 149 (213)
T 1hh8_A 137 WKKAEEQLALATS 149 (213)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988764
No 118
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=98.34 E-value=1.7e-06 Score=79.61 Aligned_cols=166 Identities=7% Similarity=-0.102 Sum_probs=119.1
Q ss_pred hHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHH----------------HHHHHH
Q psy7457 11 PQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRAR----------------RLRLCD 74 (497)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~----------------RA~Ly~ 74 (497)
++.++..+...+ +...+++|+=+|.+++.. +|+|.+.++. ++.+|.
T Consensus 4 ~~~~~~~g~~~~-----~~g~~~~A~~~~~~al~~-------------~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~ 65 (208)
T 3urz_A 4 VDEMLQKVSAAI-----EAGQNGQAVSYFRQTIAL-------------NIDRTEMYYWTNVDKNSEISSKLATELALAYK 65 (208)
T ss_dssp HHHHHHHHHHHH-----HTTCHHHHHHHHHHHHHH-------------CHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----HCCCHHHHHHHHHHHHHh-------------CCCChHHHHHhhhcchhhhhHHHHHHHHHHHH
Confidence 444444444333 345677888888877764 6677777777 999999
Q ss_pred HhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhh
Q psy7457 75 EIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLEL 154 (497)
Q Consensus 75 elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~ 154 (497)
+.|++. +|++.|++.++. .|.+. ++...+|.+|...|+.++|+..|++++...|+. ....+.++.+|...
T Consensus 66 ~~g~~~--~A~~~~~~al~~-~p~~~-----~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~--~~a~~~lg~~~~~~ 135 (208)
T 3urz_A 66 KNRNYD--KAYLFYKELLQK-APNNV-----DCLEACAEMQVCRGQEKDALRMYEKILQLEADN--LAANIFLGNYYYLT 135 (208)
T ss_dssp HTTCHH--HHHHHHHHHHHH-CTTCH-----HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC--HHHHHHHHHHHHHH
T ss_pred HCCCHH--HHHHHHHHHHHH-CCCCH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC--HHHHHHHHHHHHHH
Confidence 999999 999999999999 89885 788899999999999999999999999999975 44566666666555
Q ss_pred ccHH--HHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhc
Q psy7457 155 KRYE--TCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLAS 232 (497)
Q Consensus 155 k~y~--~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~ 232 (497)
+..+ .+.... .. .+ .|. . +-.....+|++++.+|+.+++...++.
T Consensus 136 ~~~~~~~~~~~~---~~-~~------------------------~~~-~----~~~a~~~~g~~~~~~~~~~~A~~~~~~ 182 (208)
T 3urz_A 136 AEQEKKKLETDY---KK-LS------------------------SPT-K----MQYARYRDGLSKLFTTRYEKARNSLQK 182 (208)
T ss_dssp HHHHHHHHHHHH---C----------------------------CCC-H----HHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred hHHHHHHHHHHH---HH-Hh------------------------CCC-c----hhHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 4433 222211 11 00 011 0 122467789999999998888887765
Q ss_pred c-ccCc
Q psy7457 233 L-KFDV 237 (497)
Q Consensus 233 l-~e~~ 237 (497)
. ..+|
T Consensus 183 al~l~P 188 (208)
T 3urz_A 183 VILRFP 188 (208)
T ss_dssp HTTTSC
T ss_pred HHHhCC
Confidence 5 4444
No 119
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.33 E-value=6.1e-06 Score=86.12 Aligned_cols=201 Identities=8% Similarity=-0.046 Sum_probs=149.3
Q ss_pred HHHhhcCCCCccHHHHHHHHHHHHH-------hCCcch-----hHHHHHHHHHHh-ccCCCCChhhHHHHHHHHHHHHHh
Q psy7457 51 ILIQRGLSKDTILDNRARRLRLCDE-------IGLKNR-----GFVLAGYQRYLK-NITPDSDPQTILDLSTRAAHVYHT 117 (497)
Q Consensus 51 ~~~~~~~~~p~n~~~~~~RA~Ly~e-------lG~~~~-----~~Al~~y~~il~-~~~P~d~~~~~~~~~k~LA~~Y~e 117 (497)
+..+|...+|.+.+.+..++.++.+ .|+... .+|++.|++.++ . .|.+. .+-..+|..+..
T Consensus 260 ~y~~al~~~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~-~p~~~-----~l~~~~~~~~~~ 333 (530)
T 2ooe_A 260 AYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTL-LKKNM-----LLYFAYADYEES 333 (530)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTT-CSSCH-----HHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHh-CcccH-----HHHHHHHHHHHh
Confidence 4567777789999999999999987 688631 168999999998 6 78663 677889999999
Q ss_pred cCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCcccccccccccc
Q psy7457 118 ARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTV 197 (497)
Q Consensus 118 ~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~ 197 (497)
.|++++|+++|++++...|..+. .-.+.++.++...|++++|.+++.+.... .
T Consensus 334 ~g~~~~A~~~~~~al~~~p~~~~-~~~~~~~~~~~~~~~~~~A~~~~~~Al~~--------------------------~ 386 (530)
T 2ooe_A 334 RMKYEKVHSIYNRLLAIEDIDPT-LVYIQYMKFARRAEGIKSGRMIFKKARED--------------------------A 386 (530)
T ss_dssp TTCHHHHHHHHHHHHHSSSSCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTC--------------------------T
T ss_pred cCCHHHHHHHHHHHhCccccCch-HHHHHHHHHHHHhcCHHHHHHHHHHHHhc--------------------------c
Confidence 99999999999999998775432 24566778888899999999999886531 0
Q ss_pred CCCCCCCCCcchhHHHH-HHHhhcCCCCchhHHhhcc-ccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHH
Q psy7457 198 PSDPNLVPPPEILSKFV-ITLVHLRSETQFPTLLASL-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAE 275 (497)
Q Consensus 198 p~~l~l~lPiDLr~KLg-I~ll~Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvae 275 (497)
|... + +-...+ ++...+|+.+.+..+++.. ..+| +.++ ++ ...|+
T Consensus 387 ~~~~----~--~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p-~~~~--~~------------------------~~~~~ 433 (530)
T 2ooe_A 387 RTRH----H--VYVTAALMEYYCSKDKSVAFKIFELGLKKYG-DIPE--YV------------------------LAYID 433 (530)
T ss_dssp TCCT----H--HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHT-TCHH--HH------------------------HHHHH
T ss_pred CCch----H--HHHHHHHHHHHHcCChhHHHHHHHHHHHHCC-CCHH--HH------------------------HHHHH
Confidence 2221 1 112221 2233588888777777655 4433 3345 77 99999
Q ss_pred HHHhcccHHHHHHHHHHHhcCCCC---ChHHHHHHHHHHHHHhhh
Q psy7457 276 ALIQEHYEAYAVQVLVLLVSSEKY---NQPGVWKQLAETYEKSEC 317 (497)
Q Consensus 276 Al~e~g~y~~Al~~l~~L~~~~~y---~~~~vwl~lAeCy~~l~~ 317 (497)
.+...|.++.|..+|...+..... ....+|..+++-..+.|.
T Consensus 434 ~~~~~g~~~~Ar~~~~~al~~~~~~~~~~~~lw~~~~~~e~~~G~ 478 (530)
T 2ooe_A 434 YLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGD 478 (530)
T ss_dssp HHTTTTCHHHHHHHHHHHHHSCCSCGGGCHHHHHHHHHHHHHSSC
T ss_pred HHHhCCCHhhHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999886443 245589988887666553
No 120
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.31 E-value=4.9e-06 Score=80.07 Aligned_cols=188 Identities=9% Similarity=-0.051 Sum_probs=135.8
Q ss_pred CCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCC-hhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHcc
Q psy7457 58 SKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSD-PQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSA 136 (497)
Q Consensus 58 ~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~-~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~ 136 (497)
.+|...+....++..+...|++. +|++.|++.++. .|... ..........++.+|...|+.++|+..+++++...+
T Consensus 70 ~~~~~~~~l~~~~~~~~~~~~y~--~A~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~ 146 (293)
T 2qfc_A 70 SDIERKKQFKDQVIMLCKQKRYK--EIYNKVWNELKK-EEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQL 146 (293)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHT-CCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCC
T ss_pred cchhHHHHHHHHHHHHHHhhhHH--HHHHHHHHHhcc-ccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHh
Confidence 34566777889999999999999 999999999998 66543 122334456789999999999999999999998776
Q ss_pred CCCCh----hHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHH
Q psy7457 137 HLIRP----EHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSK 212 (497)
Q Consensus 137 ~~f~~----~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~K 212 (497)
...+. .-.+.++.+|..+|+|++|+..+++.-...- . .|++.. +.+.+..-
T Consensus 147 ~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~---~--------------------~~~~~~--~~~~~~~n 201 (293)
T 2qfc_A 147 TGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLE---A--------------------LHDNEE--FDVKVRYN 201 (293)
T ss_dssp CSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH---H--------------------SCCCHH--HHHHHHHH
T ss_pred cCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH---h--------------------cCcccc--chHHHHHh
Confidence 54332 3578889999999999999999988664210 0 122110 02357788
Q ss_pred HHHHHhhcCCCCchhHHhhcc-ccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHH-HHHH
Q psy7457 213 FVITLVHLRSETQFPTLLASL-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYA-VQVL 290 (497)
Q Consensus 213 LgI~ll~Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~A-l~~l 290 (497)
+|.++..+|+.+++...+... ... .+.++ .+ ++..+|..+|.+|...|.+++| ..+|
T Consensus 202 lg~~y~~~~~y~~Al~~~~kal~~~-~~~~~--~~------------------~~~~~~~~lg~~y~~~g~~~~Ai~~~~ 260 (293)
T 2qfc_A 202 HAKALYLDSRYEESLYQVNKAIEIS-CRINS--MA------------------LIGQLYYQRGECLRKLEYEEAEIEDAY 260 (293)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHH-HHTTB--CS------------------SHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHH-HhcCc--HH------------------HHHHHHHHHHHHHHHcCCcHHHHHHHH
Confidence 999999999999877776544 221 12222 11 1122339999999999999999 7767
Q ss_pred HHHh
Q psy7457 291 VLLV 294 (497)
Q Consensus 291 ~~L~ 294 (497)
...+
T Consensus 261 ~~Al 264 (293)
T 2qfc_A 261 KKAS 264 (293)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
No 121
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.30 E-value=5.1e-06 Score=87.66 Aligned_cols=133 Identities=14% Similarity=0.035 Sum_probs=111.9
Q ss_pred CChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHH
Q psy7457 9 ENPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGY 88 (497)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y 88 (497)
.+++.|+.++.....+ .++++|+-+|.+++. .+|++.+.+...+.+|.+.|++. +|++.|
T Consensus 21 ~~~~~~~~lg~~~~~~-----g~~~~A~~~~~~al~-------------~~p~~~~~~~~lg~~~~~~g~~~--~A~~~~ 80 (568)
T 2vsy_A 21 QDFVAWLMLADAELGM-----GDTTAGEMAVQRGLA-------------LHPGHPEAVARLGRVRWTQQRHA--EAAVLL 80 (568)
T ss_dssp CCHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHT-------------TSTTCHHHHHHHHHHHHHTTCHH--HHHHHH
T ss_pred CCHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHH-------------hCCCCHHHHHHHHHHHHHCCCHH--HHHHHH
Confidence 3566777766655543 355666666666655 58899999999999999999999 999999
Q ss_pred HHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhh---ccHHHHHHHHH
Q psy7457 89 QRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLEL---KRYETCVEVLR 165 (497)
Q Consensus 89 ~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~---k~y~~al~~I~ 165 (497)
++.++. .|.+. .+...+|.+|...|+.++|++.|+++++..|+. ..-...++.++..+ +++++|++.++
T Consensus 81 ~~al~~-~p~~~-----~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~--~~~~~~l~~~~~~~~~~g~~~~A~~~~~ 152 (568)
T 2vsy_A 81 QQASDA-APEHP-----GIALWLGHALEDAGQAEAAAAAYTRAHQLLPEE--PYITAQLLNWRRRLCDWRALDVLSAQVR 152 (568)
T ss_dssp HHHHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--HHHHHHHHHHHHHTTCCTTHHHHHHHHH
T ss_pred HHHHhc-CCCCH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHhhccccHHHHHHHHH
Confidence 999999 88874 688899999999999999999999999999864 56678899999999 99999999998
Q ss_pred Hhch
Q psy7457 166 RFAN 169 (497)
Q Consensus 166 ~~~~ 169 (497)
+...
T Consensus 153 ~al~ 156 (568)
T 2vsy_A 153 AAVA 156 (568)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8654
No 122
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.30 E-value=7.3e-05 Score=77.19 Aligned_cols=130 Identities=8% Similarity=-0.028 Sum_probs=77.8
Q ss_pred CChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHH----hCCcchhHH
Q psy7457 9 ENPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDE----IGLKNRGFV 84 (497)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~e----lG~~~~~~A 84 (497)
.||+.++.++.+.+.-.+ ...++++|+-+|.++... .+.+..+.-+.+|.. .+++. +|
T Consensus 37 g~~~a~~~lg~~y~~g~~-~~~~~~~A~~~~~~a~~~---------------~~~~a~~~Lg~~y~~g~g~~~~~~--~A 98 (490)
T 2xm6_A 37 GEAKAQLELGYRYFQGNE-TTKDLTQAMDWFRRAAEQ---------------GYTPAEYVLGLRYMNGEGVPQDYA--QA 98 (490)
T ss_dssp TCHHHHHHHHHHHHHTSS-SCCCHHHHHHHHHHHHHT---------------TCHHHHHHHHHHHHHTSSSCCCHH--HH
T ss_pred CCHHHHHHHHHHHHcCCC-CCcCHHHHHHHHHHHHHC---------------CCHHHHHHHHHHHHcCCCCCCCHH--HH
Confidence 377777887777665332 245666777777776542 235566666666666 66666 66
Q ss_pred HHHHHHHHhccCCCCChhhHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHh----hcc
Q psy7457 85 LAGYQRYLKNITPDSDPQTILDLSTRAAHVYHT----ARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLE----LKR 156 (497)
Q Consensus 85 l~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e----~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~----~k~ 156 (497)
++.|++.... - + ....-.|+.+|.. .++.++|+..|+++.+.. .......|+.+|.. .++
T Consensus 99 ~~~~~~a~~~-~--~-----~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~----~~~a~~~Lg~~y~~g~g~~~d 166 (490)
T 2xm6_A 99 VIWYKKAALK-G--L-----PQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQG----RDSGQQSMGDAYFEGDGVTRD 166 (490)
T ss_dssp HHHHHHHHHT-T--C-----HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT----CHHHHHHHHHHHHHTSSSCCC
T ss_pred HHHHHHHHHC-C--C-----HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC----CHHHHHHHHHHHHcCCCCCCC
Confidence 6666666654 1 1 1344556666666 666666666666665531 23445555666655 556
Q ss_pred HHHHHHHHHHhc
Q psy7457 157 YETCVEVLRRFA 168 (497)
Q Consensus 157 y~~al~~I~~~~ 168 (497)
+++|++++++.+
T Consensus 167 ~~~A~~~~~~a~ 178 (490)
T 2xm6_A 167 YVMAREWYSKAA 178 (490)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 666666666554
No 123
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.29 E-value=5.2e-06 Score=70.52 Aligned_cols=97 Identities=7% Similarity=-0.071 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChh
Q psy7457 63 LDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPE 142 (497)
Q Consensus 63 ~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~ 142 (497)
....+.++..+.+.|++. +|+..|+++++. .|.+. ++...+|.+|...|+.++|+..|++++...|+. ..
T Consensus 17 ~~~~~~~g~~~~~~g~~~--~A~~~~~~al~~-~P~~~-----~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~--~~ 86 (121)
T 1hxi_A 17 HENPMEEGLSMLKLANLA--EAALAFEAVCQK-EPERE-----EAWRSLGLTQAENEKDGLAIIALNHARMLDPKD--IA 86 (121)
T ss_dssp CSCHHHHHHHHHHTTCHH--HHHHHHHHHHHH-STTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--HH
T ss_pred chhHHHHHHHHHHcCCHH--HHHHHHHHHHHH-CCCCH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--HH
Confidence 345788999999999999 999999999999 89875 677899999999999999999999999999975 45
Q ss_pred HHHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 143 HCNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 143 ~vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
-...|+.+|...|++++|+..+++...
T Consensus 87 ~~~~la~~~~~~g~~~~A~~~~~~al~ 113 (121)
T 1hxi_A 87 VHAALAVSHTNEHNANAALASLRAWLL 113 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 678899999999999999999988653
No 124
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.28 E-value=4.3e-06 Score=69.77 Aligned_cols=105 Identities=14% Similarity=0.040 Sum_probs=91.8
Q ss_pred CCCChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHH
Q psy7457 7 SYENPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLA 86 (497)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~ 86 (497)
.-.+|+.|+.+++..+.+ .+.++|+-+|.+++.. +|++...+..++.+|...|++. +|++
T Consensus 5 ~~~~~~~~~~~g~~~~~~-----~~~~~A~~~~~~al~~-------------~~~~~~~~~~l~~~~~~~~~~~--~A~~ 64 (137)
T 3q49_B 5 KSPSAQELKEQGNRLFVG-----RKYPEAAACYGRAITR-------------NPLVAVYYTNRALCYLKMQQPE--QALA 64 (137)
T ss_dssp -CCCHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHH-------------CTTCHHHHHHHHHHHHHTTCHH--HHHH
T ss_pred ccccHHHHHHHHHHHHHh-----CcHHHHHHHHHHHHhh-------------CcCcHHHHHHHHHHHHHhcCHH--HHHH
Confidence 446788898888877654 4567888888888774 7889999999999999999999 9999
Q ss_pred HHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccC
Q psy7457 87 GYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAH 137 (497)
Q Consensus 87 ~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~ 137 (497)
.|+++++. .|.+. .+.-.+|.+|...|+.++|+..|+.++...|+
T Consensus 65 ~~~~al~~-~p~~~-----~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 65 DCRRALEL-DGQSV-----KAHFFLGQCQLEMESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp HHHHHHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHh-CchhH-----HHHHHHHHHHHHHhhHHHHHHHHHHHHHHChh
Confidence 99999999 88874 68889999999999999999999999999887
No 125
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.28 E-value=6.8e-06 Score=66.63 Aligned_cols=102 Identities=9% Similarity=0.025 Sum_probs=88.9
Q ss_pred CccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCC
Q psy7457 60 DTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLI 139 (497)
Q Consensus 60 p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f 139 (497)
|+..+.+...+.++.+.|++. +|++.|++.++. .|.+. .+...+|.+|...|++++|+..++.++...|...
T Consensus 1 ~~~~~~~~~l~~~~~~~~~~~--~A~~~~~~a~~~-~~~~~-----~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~ 72 (131)
T 1elr_A 1 GKQALKEKELGNDAYKKKDFD--TALKHYDKAKEL-DPTNM-----TYITNQAAVYFEKGDYNKCRELCEKAIEVGRENR 72 (131)
T ss_dssp CHHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-CTTCH-----HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHST
T ss_pred ChHHHHHHHHHHHHHHhcCHH--HHHHHHHHHHhc-CCccH-----HHHHHHHHHHHHhccHHHHHHHHHHHHhhccccc
Confidence 345678889999999999999 999999999999 88774 6788999999999999999999999999988642
Q ss_pred -C----hhHHHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 140 -R----PEHCNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 140 -~----~~~vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
+ ..-...++..+...|+|++|++.+++...
T Consensus 73 ~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 107 (131)
T 1elr_A 73 EDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLA 107 (131)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 2 44567789999999999999999988664
No 126
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.27 E-value=7.1e-05 Score=77.26 Aligned_cols=261 Identities=8% Similarity=-0.051 Sum_probs=154.3
Q ss_pred CChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHH----hCCcchhHH
Q psy7457 9 ENPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDE----IGLKNRGFV 84 (497)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~e----lG~~~~~~A 84 (497)
.+|..++.++.+-....+. ..++++|+.+|.++... .+.+..+..+.+|.+ .+++. +|
T Consensus 73 ~~~~a~~~Lg~~y~~g~g~-~~~~~~A~~~~~~a~~~---------------~~~~a~~~Lg~~y~~g~g~~~~~~--~A 134 (490)
T 2xm6_A 73 GYTPAEYVLGLRYMNGEGV-PQDYAQAVIWYKKAALK---------------GLPQAQQNLGVMYHEGNGVKVDKA--ES 134 (490)
T ss_dssp TCHHHHHHHHHHHHHTSSS-CCCHHHHHHHHHHHHHT---------------TCHHHHHHHHHHHHHTSSSCCCHH--HH
T ss_pred CCHHHHHHHHHHHHcCCCC-CCCHHHHHHHHHHHHHC---------------CCHHHHHHHHHHHHcCCCCCCCHH--HH
Confidence 4788888888887764432 45688899999888753 345677777888888 77888 88
Q ss_pred HHHHHHHHhccCCCCChhhHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHh----hcc
Q psy7457 85 LAGYQRYLKNITPDSDPQTILDLSTRAAHVYHT----ARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLE----LKR 156 (497)
Q Consensus 85 l~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e----~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~----~k~ 156 (497)
++.|++.... +. .+....|+.+|.. .++.++|++.|+++.+. .+......|..+|.. .++
T Consensus 135 ~~~~~~a~~~----~~----~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~----~~~~a~~~Lg~~y~~g~g~~~~ 202 (490)
T 2xm6_A 135 VKWFRLAAEQ----GR----DSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ----GNVWSCNQLGYMYSRGLGVERN 202 (490)
T ss_dssp HHHHHHHHHT----TC----HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHTSSSCCC
T ss_pred HHHHHHHHHC----CC----HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC----CCHHHHHHHHHHHhcCCCCCcC
Confidence 8888887766 22 2466778888887 78888888888888774 245667777777777 788
Q ss_pred HHHHHHHHHHhchheeeeccC--------CCCCC-CCCccccccccccccCCCCCCCCCcchhHHHHHHHhh----cCCC
Q psy7457 157 YETCVEVLRRFANIEITYFKL--------FPQDS-TSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVH----LRSE 223 (497)
Q Consensus 157 y~~al~~I~~~~~~~l~~~~~--------~~~D~-e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~----Lg~~ 223 (497)
+++|++++++.+..- .... ....+ ..+..........-. ..- +.+....||.+... .++.
T Consensus 203 ~~~A~~~~~~a~~~~--~~~a~~~lg~~y~~g~g~~~~~~~A~~~~~~a~-~~~----~~~a~~~lg~~y~~g~~~~~d~ 275 (490)
T 2xm6_A 203 DAISAQWYRKSATSG--DELGQLHLADMYYFGIGVTQDYTQSRVLFSQSA-EQG----NSIAQFRLGYILEQGLAGAKEP 275 (490)
T ss_dssp HHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHH-TTT----CHHHHHHHHHHHHHTTTSSCCH
T ss_pred HHHHHHHHHHHHHCC--CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHH-HCC----CHHHHHHHHHHHHCCCCCCCCH
Confidence 888888887765310 0000 00000 000000000000000 111 44667777777665 4444
Q ss_pred CchhHHhhcc-ccCcccccccchhhhhHHHHHH------HHHHHHHHHhh-------hhhhHHHHHHHHhcc---cHHHH
Q psy7457 224 TQFPTLLASL-KFDVEMYGTITVYLDIAEALIQ------EHYEAYAVQFK-------ELVYLDIAEALIQEH---YEAYA 286 (497)
Q Consensus 224 ~~~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~------~~~~~~~~~~~-------~~~~ldvaeAl~e~g---~y~~A 286 (497)
+.+...+... +. ++.+-++..+..-.. .+|+.+...|. ...++.+|.+|...| .+++|
T Consensus 276 ~~A~~~~~~a~~~-----~~~~a~~~Lg~~y~~~~~g~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~y~~~g~~~~~~~A 350 (490)
T 2xm6_A 276 LKALEWYRKSAEQ-----GNSDGQYYLAHLYDKGAEGVAKNREQAISWYTKSAEQGDATAQANLGAIYFRLGSEEEHKKA 350 (490)
T ss_dssp HHHHHHHHHHHTT-----TCHHHHHHHHHHHHHCBTTBCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCCHHHHHHH
T ss_pred HHHHHHHHHHHHc-----CCHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCcccHHHH
Confidence 4444444332 21 221244333333333 23555555554 224566777777655 67777
Q ss_pred HHHHHHHhcCCCCChHHHHHHHHHHHHH
Q psy7457 287 VQVLVLLVSSEKYNQPGVWKQLAETYEK 314 (497)
Q Consensus 287 l~~l~~L~~~~~y~~~~vwl~lAeCy~~ 314 (497)
+.+|...... ..+..|..+|.+|..
T Consensus 351 ~~~~~~a~~~---~~~~a~~~Lg~~y~~ 375 (490)
T 2xm6_A 351 VEWFRKAAAK---GEKAAQFNLGNALLQ 375 (490)
T ss_dssp HHHHHHHHHT---TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHC---CCHHHHHHHHHHHHc
Confidence 7777777655 345567777777766
No 127
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=98.25 E-value=2.5e-06 Score=71.11 Aligned_cols=102 Identities=10% Similarity=-0.006 Sum_probs=87.7
Q ss_pred ChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHH
Q psy7457 10 NPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQ 89 (497)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~ 89 (497)
+++.|...++..+. ..+.++|+-+|.+++.. +|++...+..++.+|.++|++. +|++.|+
T Consensus 3 ~a~~~~~~g~~~~~-----~~~~~~A~~~~~~al~~-------------~p~~~~~~~~~a~~~~~~~~~~--~A~~~~~ 62 (126)
T 3upv_A 3 KAEEARLEGKEYFT-----KSDWPNAVKAYTEMIKR-------------APEDARGYSNRAAALAKLMSFP--EAIADCN 62 (126)
T ss_dssp HHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHH-------------CTTCHHHHHHHHHHHHHTTCHH--HHHHHHH
T ss_pred hHHHHHHHHHHHHH-----hcCHHHHHHHHHHHHHh-------------CCCChHHHHHHHHHHHHhcCHH--HHHHHHH
Confidence 45677777766654 34567788888777764 8899999999999999999999 9999999
Q ss_pred HHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccC
Q psy7457 90 RYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAH 137 (497)
Q Consensus 90 ~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~ 137 (497)
+.++. .|.+. .+...+|.+|...|+.++|+..|++++...|+
T Consensus 63 ~al~~-~p~~~-----~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~ 104 (126)
T 3upv_A 63 KAIEK-DPNFV-----RAYIRKATAQIAVKEYASALETLDAARTKDAE 104 (126)
T ss_dssp HHHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHh-CCCcH-----HHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcc
Confidence 99999 88874 67889999999999999999999999999843
No 128
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.24 E-value=9.3e-07 Score=70.08 Aligned_cols=104 Identities=16% Similarity=0.047 Sum_probs=87.2
Q ss_pred CChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHH
Q psy7457 9 ENPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGY 88 (497)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y 88 (497)
.+|..|+.++..... ..+.++|+-+|.+++.. +|++...++.++.+|.+.|++. +|++.|
T Consensus 4 ~~~~~~~~~~~~~~~-----~~~~~~A~~~~~~a~~~-------------~~~~~~~~~~~a~~~~~~~~~~--~A~~~~ 63 (112)
T 2kck_A 4 QNPEEYYLEGVLQYD-----AGNYTESIDLFEKAIQL-------------DPEESKYWLMKGKALYNLERYE--EAVDCY 63 (112)
T ss_dssp SSTTGGGGHHHHHHS-----SCCHHHHHHHHHHHHHH-------------CCCCHHHHHHHHHHHHHTTCHH--HHHHHH
T ss_pred CcHHHHHHHHHHHHH-----hhhHHHHHHHHHHHHHh-------------CcCCHHHHHHHHHHHHHccCHH--HHHHHH
Confidence 356667666665443 34667777777777763 7888999999999999999999 999999
Q ss_pred HHHHhccCCC--CChhhHHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHHccCC
Q psy7457 89 QRYLKNITPD--SDPQTILDLSTRAAHVYHTA-RNFPQAASSLAIAFQYSAHL 138 (497)
Q Consensus 89 ~~il~~~~P~--d~~~~~~~~~k~LA~~Y~e~-~~~~~Ai~~le~a~~~~~~~ 138 (497)
++.++. .|. +. .+...+|.+|... |+.++|++.++.++...|+.
T Consensus 64 ~~a~~~-~~~~~~~-----~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 64 NYVINV-IEDEYNK-----DVWAAKADALRYIEGKEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp HHHHHT-SCCTTCH-----HHHHHHHHHHTTCSSCSHHHHHHHHHHGGGCCCC
T ss_pred HHHHHh-CcccchH-----HHHHHHHHHHHHHhCCHHHHHHHHHHHhhcccCC
Confidence 999999 888 53 6889999999999 99999999999999998864
No 129
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.24 E-value=8.1e-06 Score=72.60 Aligned_cols=78 Identities=18% Similarity=0.151 Sum_probs=51.4
Q ss_pred HHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhhccHHHHHH
Q psy7457 83 FVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVE 162 (497)
Q Consensus 83 ~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~ 162 (497)
.|++.|++.++. .|.+. ++.-.+|.+|...|+.++|+..|++++...|+.-+......++.++..+|++.+|+.
T Consensus 92 ~a~~~~~~al~~-~P~~~-----~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~ 165 (176)
T 2r5s_A 92 PELKRLEQELAA-NPDNF-----ELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIAS 165 (176)
T ss_dssp HHHHHHHHHHHH-STTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHH
T ss_pred hHHHHHHHHHHh-CCCCH-----HHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHH
Confidence 456666666666 66553 455666777777777777777777777776665444556666777777777776666
Q ss_pred HHHH
Q psy7457 163 VLRR 166 (497)
Q Consensus 163 ~I~~ 166 (497)
..++
T Consensus 166 ~y~~ 169 (176)
T 2r5s_A 166 KYRR 169 (176)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 130
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.24 E-value=8.6e-06 Score=78.38 Aligned_cols=185 Identities=8% Similarity=-0.068 Sum_probs=133.1
Q ss_pred ccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCCh-hhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCC
Q psy7457 61 TILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDP-QTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLI 139 (497)
Q Consensus 61 ~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~-~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f 139 (497)
..+....+.+..+...|++. +|.+.|+++++. .|.++. ..+......++..|...+++++|+..|+.++...+...
T Consensus 73 ~~~~~l~~~i~~~~~~~~y~--~a~~~~~~~l~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~ 149 (293)
T 3u3w_A 73 ERKKQFKDQVIMLCKQKRYK--EIYNKVWNELKK-EEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGI 149 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHTT-CCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCS
T ss_pred hhHHHHHHHHHHHHHHhhHH--HHHHHHHHHhcc-ccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccc
Confidence 34556667788999999999 999999999998 665532 12245666799999999999999999999999766655
Q ss_pred Chh----HHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHH
Q psy7457 140 RPE----HCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVI 215 (497)
Q Consensus 140 ~~~----~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI 215 (497)
++. -.|.++..|..+|+|++|+...++.-...- . .|.+. ..-..+..-+|.
T Consensus 150 ~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~---~--------------------~~~~~--~~~~~~~~nlg~ 204 (293)
T 3u3w_A 150 DVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLE---A--------------------LHDNE--EFDVKVRYNHAK 204 (293)
T ss_dssp CTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH---H--------------------SSCCH--HHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH---h--------------------cccch--hHHHHHHHHHHH
Confidence 542 378899999999999999999988664210 0 01111 003456788999
Q ss_pred HHhhcCCCCchhHHhhcc-ccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcc-cHHHHHHHHHHH
Q psy7457 216 TLVHLRSETQFPTLLASL-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEH-YEAYAVQVLVLL 293 (497)
Q Consensus 216 ~ll~Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g-~y~~Al~~l~~L 293 (497)
++.++|+.+++...+... .. ..+.++ .+ ++..++..+|.+|...| .|++|+.+|...
T Consensus 205 ~y~~~~~y~~A~~~~~~al~~-~~~~~~--~~------------------~~~~~~~~lg~~~~~~g~~~~~A~~~~~~A 263 (293)
T 3u3w_A 205 ALYLDSRYEESLYQVNKAIEI-SCRINS--MA------------------LIGQLYYQRGECLRKLEYEEAEIEDAYKKA 263 (293)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH-HHHTTB--CT------------------THHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHH-HHHcCc--HH------------------HHHHHHHHHHHHHHHhCCcHHHHHHHHHHH
Confidence 999999988877665443 21 112222 11 11223399999999999 579999998765
Q ss_pred h
Q psy7457 294 V 294 (497)
Q Consensus 294 ~ 294 (497)
+
T Consensus 264 l 264 (293)
T 3u3w_A 264 S 264 (293)
T ss_dssp H
T ss_pred H
Confidence 4
No 131
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.24 E-value=8.3e-06 Score=67.14 Aligned_cols=84 Identities=8% Similarity=-0.121 Sum_probs=74.5
Q ss_pred HHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy7457 51 ILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAI 130 (497)
Q Consensus 51 ~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~ 130 (497)
.+.++...+|++...++..+.+|...|++. +|++.|++.++. .|.+. .....+|.+|...|+.++|+..|++
T Consensus 7 ~~~~al~~~p~~~~~~~~lg~~~~~~g~~~--~A~~~~~~al~~-~p~~~-----~~~~~la~~~~~~g~~~~A~~~~~~ 78 (115)
T 2kat_A 7 RLEAMLAQGTDNMLLRFTLGKTYAEHEQFD--AALPHLRAALDF-DPTYS-----VAWKWLGKTLQGQGDRAGARQAWES 78 (115)
T ss_dssp HHHHHHTTTCCCHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-CTTCH-----HHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHccCHH--HHHHHHHHHHHH-CCCcH-----HHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 456667789999999999999999999999 999999999999 88774 5778999999999999999999999
Q ss_pred HHHHccCCCChh
Q psy7457 131 AFQYSAHLIRPE 142 (497)
Q Consensus 131 a~~~~~~~f~~~ 142 (497)
++...|...+..
T Consensus 79 al~~~~~~~~~~ 90 (115)
T 2kat_A 79 GLAAAQSRGDQQ 90 (115)
T ss_dssp HHHHHHHHTCHH
T ss_pred HHHhccccccHH
Confidence 999888654433
No 132
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.23 E-value=2.2e-05 Score=64.64 Aligned_cols=100 Identities=10% Similarity=-0.054 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCC-hhH
Q psy7457 65 NRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIR-PEH 143 (497)
Q Consensus 65 ~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~-~~~ 143 (497)
.++.++..+.+.|++. +|++.|+++++. .|.+.. ..++.-.+|..|...|++++|+..|+.++..+|+.-. ..-
T Consensus 4 ~~~~~a~~~~~~~~~~--~A~~~~~~~~~~-~p~~~~--~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~ 78 (129)
T 2xev_A 4 TAYNVAFDALKNGKYD--DASQLFLSFLEL-YPNGVY--TPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGG 78 (129)
T ss_dssp CHHHHHHHHHHTTCHH--HHHHHHHHHHHH-CSSSTT--HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHH
T ss_pred HHHHHHHHHHHhCCHH--HHHHHHHHHHHH-CCCCcc--cHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHH
Confidence 4688999999999999 999999999999 898752 2257778999999999999999999999999997643 355
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 144 CNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 144 vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
...++..|..+|++++|++.+++...
T Consensus 79 ~~~la~~~~~~g~~~~A~~~~~~~~~ 104 (129)
T 2xev_A 79 LLKLGLSQYGEGKNTEAQQTLQQVAT 104 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 78899999999999999999988764
No 133
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=98.21 E-value=2.8e-06 Score=84.83 Aligned_cols=137 Identities=12% Similarity=0.045 Sum_probs=114.5
Q ss_pred HhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCC----------hhhHHHHHHHHHHHHHhcCCHH
Q psy7457 53 IQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSD----------PQTILDLSTRAAHVYHTARNFP 122 (497)
Q Consensus 53 ~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~----------~~~~~~~~k~LA~~Y~e~~~~~ 122 (497)
.++...+|++...+..++.+|.+.|++. +|++.|++.++. .|.+. ......+...+|.+|...|+++
T Consensus 137 ~~a~~~~p~~a~~~~~~g~~~~~~g~~~--~A~~~y~~Al~~-~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~ 213 (336)
T 1p5q_A 137 EMNSEEKLEQSTIVKERGTVYFKEGKYK--QALLQYKKIVSW-LEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFS 213 (336)
T ss_dssp GCCHHHHHHHHHHHHHHHHHHHHHTCHH--HHHHHHHHHHHH-TTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHCCCHH--HHHHHHHHHHHH-hhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHH
Confidence 4444557888999999999999999999 999999999999 99873 1112367889999999999999
Q ss_pred HHHHHHHHHHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCC
Q psy7457 123 QAASSLAIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPN 202 (497)
Q Consensus 123 ~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~ 202 (497)
+|+..|++++...|.. ..-+.-++.+|..+++|++|+..+++..... |.+
T Consensus 214 ~A~~~~~~al~~~p~~--~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~--------------------------P~~-- 263 (336)
T 1p5q_A 214 AAIESCNKALELDSNN--EKGLSRRGEAHLAVNDFELARADFQKVLQLY--------------------------PNN-- 263 (336)
T ss_dssp HHHHHHHHHHHHCTTC--HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------------------------SSC--
T ss_pred HHHHHHHHHHHhCCCc--HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC--------------------------CCC--
Confidence 9999999999999974 5668889999999999999999998876421 342
Q ss_pred CCCCcchhHHHHHHHhhcCCCCch
Q psy7457 203 LVPPPEILSKFVITLVHLRSETQF 226 (497)
Q Consensus 203 l~lPiDLr~KLgI~ll~Lg~~~~~ 226 (497)
.+.+..++.++.++|+.+++
T Consensus 264 ----~~a~~~l~~~~~~~~~~~~a 283 (336)
T 1p5q_A 264 ----KAAKTQLAVCQQRIRRQLAR 283 (336)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHHHHHHH
Confidence 35778889999999887664
No 134
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=98.19 E-value=2.7e-06 Score=72.78 Aligned_cols=102 Identities=8% Similarity=0.022 Sum_probs=84.3
Q ss_pred ccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCCh--hhHHH
Q psy7457 29 VINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDP--QTILD 106 (497)
Q Consensus 29 ~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~--~~~~~ 106 (497)
..+.++|+=+|.+++.. +|++...+..++.+|.++|++. +|++.|++.++. .|.+.. ..+..
T Consensus 21 ~~~~~~A~~~y~~Al~~-------------~p~~~~~~~nlg~~~~~~~~~~--~A~~~~~~al~~-~~~~~~~~~~~a~ 84 (127)
T 4gcn_A 21 QKDFEKAHVHYDKAIEL-------------DPSNITFYNNKAAVYFEEKKFA--ECVQFCEKAVEV-GRETRADYKLIAK 84 (127)
T ss_dssp TTCHHHHHHHHHHHHHH-------------CTTCHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-HHHTTCCHHHHHH
T ss_pred cCCHHHHHHHHHHHHHh-------------CCCCHHHHHhHHHHHHHhhhHH--HHHHHHHHHHHh-CcccchhhHHHHH
Confidence 45678888888888874 8999999999999999999999 999999999998 776642 23345
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHH
Q psy7457 107 LSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLE 149 (497)
Q Consensus 107 ~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaE 149 (497)
+.-.++..|...|++++|++.|++++..+|+ .+.+..|.+
T Consensus 85 ~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~---~~~~~~l~~ 124 (127)
T 4gcn_A 85 AMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD---PELVKKVKE 124 (127)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC---HHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC---HHHHHHHHH
Confidence 6778999999999999999999999998874 344444433
No 135
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.19 E-value=1.3e-06 Score=74.24 Aligned_cols=101 Identities=11% Similarity=-0.042 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHH
Q psy7457 12 QEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRY 91 (497)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~i 91 (497)
..|+..+...+. ..++++|+=+|.+++. .+|++.+.++..+.++.+.|++. +|+..|++.
T Consensus 18 ~~~~~~g~~~~~-----~g~~~~A~~~~~~al~-------------~~P~~~~a~~~lg~~~~~~g~~~--~A~~~~~~a 77 (121)
T 1hxi_A 18 ENPMEEGLSMLK-----LANLAEAALAFEAVCQ-------------KEPEREEAWRSLGLTQAENEKDG--LAIIALNHA 77 (121)
T ss_dssp SCHHHHHHHHHH-----TTCHHHHHHHHHHHHH-------------HSTTCHHHHHHHHHHHHHTTCHH--HHHHHHHHH
T ss_pred hhHHHHHHHHHH-----cCCHHHHHHHHHHHHH-------------HCCCCHHHHHHHHHHHHHcCCHH--HHHHHHHHH
Confidence 356665554443 3466777777777776 48999999999999999999999 999999999
Q ss_pred HhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCC
Q psy7457 92 LKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHL 138 (497)
Q Consensus 92 l~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~ 138 (497)
++. -|.+. ++.-.+|.+|...|+.++|+..|++++...|+.
T Consensus 78 l~l-~P~~~-----~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~ 118 (121)
T 1hxi_A 78 RML-DPKDI-----AVHAALAVSHTNEHNANAALASLRAWLLSQPQY 118 (121)
T ss_dssp HHH-CTTCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HHh-CCCCH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCC
Confidence 999 89875 677899999999999999999999999988854
No 136
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.19 E-value=4.6e-05 Score=74.66 Aligned_cols=181 Identities=10% Similarity=-0.068 Sum_probs=135.8
Q ss_pred HHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChh-
Q psy7457 64 DNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPE- 142 (497)
Q Consensus 64 ~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~- 142 (497)
....-++.++...|++. +|++.+++.+.. .|.++......+...++..|...|++++|+..+++++...|...+..
T Consensus 15 ~~~~~~a~~~~~~g~~~--~A~~~~~~al~~-~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 91 (373)
T 1hz4_A 15 EFNALRAQVAINDGNPD--EAERLAKLALEE-LPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHY 91 (373)
T ss_dssp HHHHHHHHHHHHTTCHH--HHHHHHHHHHHT-CCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHCCCHH--HHHHHHHHHHHc-CCCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHH
Confidence 56678899999999999 999999999999 88776444556788999999999999999999999999887765442
Q ss_pred ---HHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhh
Q psy7457 143 ---HCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVH 219 (497)
Q Consensus 143 ---~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~ 219 (497)
-.+.++.++...|+|.+|+..+++.-...- ... .+... .......-+|.++..
T Consensus 92 ~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~--~~~-------------------~~~~~---~~~~~~~~la~~~~~ 147 (373)
T 1hz4_A 92 ALWSLIQQSEILFAQGFLQTAWETQEKAFQLIN--EQH-------------------LEQLP---MHEFLVRIRAQLLWA 147 (373)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH--HTT-------------------CTTST---HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH--Hhc-------------------cccCc---HHHHHHHHHHHHHHH
Confidence 267789999999999999999988654221 000 01110 012345568888899
Q ss_pred cCCCCchhHHhhcc-ccCcccccc---cchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHHHHHHHHhc
Q psy7457 220 LRSETQFPTLLASL-KFDVEMYGT---ITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAVQVLVLLVS 295 (497)
Q Consensus 220 Lg~~~~~~~l~~~l-~e~~ee~~D---~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al~~l~~L~~ 295 (497)
.|+.+.+..++... ...+ ..++ ...+ ..+|.++...|.+++|+.+|.....
T Consensus 148 ~g~~~~A~~~~~~al~~~~-~~~~~~~~~~~------------------------~~la~~~~~~g~~~~A~~~l~~a~~ 202 (373)
T 1hz4_A 148 WARLDEAEASARSGIEVLS-SYQPQQQLQCL------------------------AMLIQCSLARGDLDNARSQLNRLEN 202 (373)
T ss_dssp TTCHHHHHHHHHHHHHHTT-TSCGGGGHHHH------------------------HHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHhh-ccCcHHHHHHH------------------------HHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 99998887776544 2211 1222 0133 8899999999999999999998765
Q ss_pred C
Q psy7457 296 S 296 (497)
Q Consensus 296 ~ 296 (497)
.
T Consensus 203 ~ 203 (373)
T 1hz4_A 203 L 203 (373)
T ss_dssp H
T ss_pred H
Confidence 4
No 137
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.18 E-value=8.5e-06 Score=66.58 Aligned_cols=85 Identities=9% Similarity=-0.012 Sum_probs=70.9
Q ss_pred CCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccC
Q psy7457 58 SKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAH 137 (497)
Q Consensus 58 ~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~ 137 (497)
.+|+|...++..+.+|.+.|++. +|++.|+++++. .|.+. .+.-.+|.+|...|+.++|++.|++++...|.
T Consensus 2 ~~p~~~~~~~~lg~~~~~~g~~~--~A~~~~~~al~~-~p~~~-----~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~ 73 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLKHDNAS--RALALFEELVET-DPDYV-----GTYYHLGKLYERLDRTDDAIDTYAQGIEVARE 73 (100)
T ss_dssp ---CCHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-STTCT-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHh-CCCcH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhc
Confidence 47999999999999999999999 999999999999 99886 57789999999999999999999999998776
Q ss_pred CCChhHHHHHHHH
Q psy7457 138 LIRPEHCNLYLEV 150 (497)
Q Consensus 138 ~f~~~~vNiLaEL 150 (497)
.-+....--+.++
T Consensus 74 ~~~~~~~~~l~~~ 86 (100)
T 3ma5_A 74 EGTQKDLSELQDA 86 (100)
T ss_dssp HSCHHHHHHHHHH
T ss_pred CCchhHHHHHHHH
Confidence 5444433333333
No 138
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.18 E-value=4.2e-06 Score=66.64 Aligned_cols=103 Identities=17% Similarity=0.015 Sum_probs=87.9
Q ss_pred ChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHH
Q psy7457 10 NPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQ 89 (497)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~ 89 (497)
+++.|+.+++.-+. ..++++|+-+|.+++.. +|++...+..++.+|...|++. +|++.|+
T Consensus 3 ~~~~~~~~~~~~~~-----~~~~~~A~~~~~~~~~~-------------~~~~~~~~~~~a~~~~~~~~~~--~A~~~~~ 62 (118)
T 1elw_A 3 QVNELKEKGNKALS-----VGNIDDALQCYSEAIKL-------------DPHNHVLYSNRSAAYAKKGDYQ--KAYEDGC 62 (118)
T ss_dssp HHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHH-------------CTTCHHHHHHHHHHHHHHTCHH--HHHHHHH
T ss_pred hHHHHHHHHHHHHH-----cccHHHHHHHHHHHHHH-------------CCCcHHHHHHHHHHHHhhccHH--HHHHHHH
Confidence 46777777776554 45677777777777663 7888999999999999999999 9999999
Q ss_pred HHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCC
Q psy7457 90 RYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHL 138 (497)
Q Consensus 90 ~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~ 138 (497)
++++. .|.+. .+...+|.+|...|+.++|+..|+.++...|+.
T Consensus 63 ~~~~~-~~~~~-----~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~ 105 (118)
T 1elw_A 63 KTVDL-KPDWG-----KGYSRKAAALEFLNRFEEAKRTYEEGLKHEANN 105 (118)
T ss_dssp HHHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTC
T ss_pred HHHHh-CcccH-----HHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCC
Confidence 99999 88764 678899999999999999999999999988854
No 139
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=98.17 E-value=9e-06 Score=81.08 Aligned_cols=126 Identities=6% Similarity=-0.049 Sum_probs=106.4
Q ss_pred ChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCcc---------------HHHHHHHHHHHH
Q psy7457 10 NPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTI---------------LDNRARRLRLCD 74 (497)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n---------------~~~~~~RA~Ly~ 74 (497)
++..|+.+++.... ..+.++|+-+|.+++.. +|++ ...+..++.+|.
T Consensus 146 ~a~~~~~~g~~~~~-----~g~~~~A~~~y~~Al~~-------------~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~ 207 (336)
T 1p5q_A 146 QSTIVKERGTVYFK-----EGKYKQALLQYKKIVSW-------------LEYESSFSNEEAQKAQALRLASHLNLAMCHL 207 (336)
T ss_dssp HHHHHHHHHHHHHH-----HTCHHHHHHHHHHHHHH-------------TTTCCCCCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----CCCHHHHHHHHHHHHHH-------------hhccccCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566666665544 45678888888888875 4555 799999999999
Q ss_pred HhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhh
Q psy7457 75 EIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLEL 154 (497)
Q Consensus 75 elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~ 154 (497)
++|++. +|++.|+++++. .|.+. .+.-.+|.+|...|++++|+..|++++...|+. ..-...++.++..+
T Consensus 208 ~~g~~~--~A~~~~~~al~~-~p~~~-----~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~--~~a~~~l~~~~~~~ 277 (336)
T 1p5q_A 208 KLQAFS--AAIESCNKALEL-DSNNE-----KGLSRRGEAHLAVNDFELARADFQKVLQLYPNN--KAAKTQLAVCQQRI 277 (336)
T ss_dssp HTTCHH--HHHHHHHHHHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSC--HHHHHHHHHHHHHH
T ss_pred HcCCHH--HHHHHHHHHHHh-CCCcH-----HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC--HHHHHHHHHHHHHH
Confidence 999999 999999999999 89874 688899999999999999999999999999965 45678899999999
Q ss_pred ccHHHHHHH
Q psy7457 155 KRYETCVEV 163 (497)
Q Consensus 155 k~y~~al~~ 163 (497)
++++++.+-
T Consensus 278 ~~~~~a~~~ 286 (336)
T 1p5q_A 278 RRQLAREKK 286 (336)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998553
No 140
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.14 E-value=3.6e-06 Score=70.06 Aligned_cols=91 Identities=11% Similarity=-0.027 Sum_probs=77.9
Q ss_pred cCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHH
Q psy7457 30 INPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLST 109 (497)
Q Consensus 30 ~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k 109 (497)
.++++|+-+|-+++..+ .++|++...+...+.+|.++|++. +|++.|+++++. .|.+. .+..
T Consensus 4 g~~~~A~~~~~~al~~~----------~~~p~~~~~~~~lg~~~~~~~~~~--~A~~~~~~al~~-~p~~~-----~~~~ 65 (117)
T 3k9i_A 4 GLEAQAVPYYEKAIASG----------LQGKDLAECYLGLGSTFRTLGEYR--KAEAVLANGVKQ-FPNHQ-----ALRV 65 (117)
T ss_dssp ---CCCHHHHHHHHSSC----------CCHHHHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-CTTCH-----HHHH
T ss_pred CcHHHHHHHHHHHHHcC----------CCCccHHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHh-CCCch-----HHHH
Confidence 45677777777777731 226888999999999999999999 999999999999 99884 6888
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHccCC
Q psy7457 110 RAAHVYHTARNFPQAASSLAIAFQYSAHL 138 (497)
Q Consensus 110 ~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~ 138 (497)
.+|.+|...|+.++|+..+++++...|+.
T Consensus 66 ~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 94 (117)
T 3k9i_A 66 FYAMVLYNLGRYEQGVELLLKIIAETSDD 94 (117)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCc
Confidence 99999999999999999999999999865
No 141
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=98.13 E-value=1.6e-05 Score=69.90 Aligned_cols=106 Identities=11% Similarity=-0.023 Sum_probs=88.1
Q ss_pred CChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHH-HHHhCCc--chhHHH
Q psy7457 9 ENPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRL-CDEIGLK--NRGFVL 85 (497)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~L-y~elG~~--~~~~Al 85 (497)
.+|..|+.++..... ..++++|+-+|.+++.. +|++...+...+.+ |...|++ . +|+
T Consensus 42 ~~~~~~~~lg~~~~~-----~~~~~~A~~~~~~al~~-------------~p~~~~~~~~la~~l~~~~~~~~~~--~A~ 101 (177)
T 2e2e_A 42 QNSEQWALLGEYYLW-----QNDYSNSLLAYRQALQL-------------RGENAELYAALATVLYYQASQHMTA--QTR 101 (177)
T ss_dssp SCHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHH-------------HCSCHHHHHHHHHHHHHHTTTCCCH--HHH
T ss_pred CcHHHHHHHHHHHHH-----cCCHHHHHHHHHHHHHc-------------CCCCHHHHHHHHHHHHHhcCCcchH--HHH
Confidence 456667666665443 34567777777777663 78889999999999 8899998 9 999
Q ss_pred HHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCC
Q psy7457 86 AGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIR 140 (497)
Q Consensus 86 ~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~ 140 (497)
+.|+++++. .|.+. .+...+|.+|...|+.++|+..|+.++...|+...
T Consensus 102 ~~~~~al~~-~p~~~-----~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~ 150 (177)
T 2e2e_A 102 AMIDKALAL-DSNEI-----TALMLLASDAFMQANYAQAIELWQKVMDLNSPRIN 150 (177)
T ss_dssp HHHHHHHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSC
T ss_pred HHHHHHHHh-CCCcH-----HHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCcc
Confidence 999999999 88774 67889999999999999999999999999998643
No 142
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=98.13 E-value=7.7e-05 Score=66.81 Aligned_cols=94 Identities=10% Similarity=0.055 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChh
Q psy7457 63 LDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPE 142 (497)
Q Consensus 63 ~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~ 142 (497)
.-.++.++..+.+.|++. +|++.|++++ +++. .+...+|.+|...|+.++|++.|+.++...|.. ..
T Consensus 6 ~~~~~~~g~~~~~~~~~~--~A~~~~~~a~----~~~~-----~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~~ 72 (213)
T 1hh8_A 6 AISLWNEGVLAADKKDWK--GALDAFSAVQ----DPHS-----RICFNIGCMYTILKNMTEAEKAFTRSINRDKHL--AV 72 (213)
T ss_dssp HHHHHHHHHHHHHTTCHH--HHHHHHHTSS----SCCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--HH
T ss_pred HHHHHHHHHHHHHhCCHH--HHHHHHHHHc----CCCh-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc--hH
Confidence 445789999999999999 9999999874 2232 588899999999999999999999999999864 56
Q ss_pred HHHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 143 HCNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 143 ~vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
-.+.++.+|...|+|++|++.+++...
T Consensus 73 ~~~~lg~~~~~~~~~~~A~~~~~~al~ 99 (213)
T 1hh8_A 73 AYFQRGMLYYQTEKYDLAIKDLKEALI 99 (213)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 788899999999999999999988664
No 143
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.08 E-value=6.6e-06 Score=66.72 Aligned_cols=119 Identities=10% Similarity=0.018 Sum_probs=92.9
Q ss_pred ChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHH
Q psy7457 10 NPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQ 89 (497)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~ 89 (497)
.++.|+.+++.... ..++++|+-+|.+++.. +|.+...+...+.+|.+.|++. +|++.|+
T Consensus 3 ~~~~~~~l~~~~~~-----~~~~~~A~~~~~~a~~~-------------~~~~~~~~~~la~~~~~~~~~~--~A~~~~~ 62 (131)
T 1elr_A 3 QALKEKELGNDAYK-----KKDFDTALKHYDKAKEL-------------DPTNMTYITNQAAVYFEKGDYN--KCRELCE 62 (131)
T ss_dssp HHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHH-------------CTTCHHHHHHHHHHHHHHTCHH--HHHHHHH
T ss_pred HHHHHHHHHHHHHH-----hcCHHHHHHHHHHHHhc-------------CCccHHHHHHHHHHHHHhccHH--HHHHHHH
Confidence 35667666665443 45678888888888774 6888999999999999999999 9999999
Q ss_pred HHHhccCCCCChh--hHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHH
Q psy7457 90 RYLKNITPDSDPQ--TILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLL 152 (497)
Q Consensus 90 ~il~~~~P~d~~~--~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i 152 (497)
+.++. .|.+... ....+...+|.+|...|+.++|++.|+.++...|+ ......+..++-
T Consensus 63 ~~~~~-~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~---~~~~~~l~~~~~ 123 (131)
T 1elr_A 63 KAIEV-GRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRT---PDVLKKCQQAEK 123 (131)
T ss_dssp HHHHH-HHHSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC---HHHHHHHHHHHH
T ss_pred HHHhh-ccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC---HHHHHHHHHHHH
Confidence 99999 8865321 12468889999999999999999999999998874 344444444443
No 144
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.06 E-value=6.6e-05 Score=73.58 Aligned_cols=186 Identities=11% Similarity=-0.094 Sum_probs=129.1
Q ss_pred CccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCC
Q psy7457 60 DTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLI 139 (497)
Q Consensus 60 p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f 139 (497)
|.....+...+.+|.+.|++. +|.+.|++.+.. .|.............+|.+|...|+.++|+..++.+....+...
T Consensus 132 ~~~~~~~~~la~~~~~~g~~~--~A~~~~~~al~~-~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~~ 208 (373)
T 1hz4_A 132 PMHEFLVRIRAQLLWAWARLD--EAEASARSGIEV-LSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNGK 208 (373)
T ss_dssp THHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-TTTSCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSC
T ss_pred cHHHHHHHHHHHHHHHhcCHH--HHHHHHHHHHHH-hhccCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhccC
Confidence 455667788999999999999 999999999999 77654333456778899999999999999999999998754422
Q ss_pred C---hhHH--HHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHH
Q psy7457 140 R---PEHC--NLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFV 214 (497)
Q Consensus 140 ~---~~~v--NiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLg 214 (497)
. |... ...+.++...|++++|..++.+..... |... .++.....-++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~--------------------------~~~~--~~~~~~~~~la 260 (373)
T 1hz4_A 209 YHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPE--------------------------FANN--HFLQGQWRNIA 260 (373)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHSCCCC--------------------------CTTC--GGGHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHCCCHHHHHHHHHhCCCCC--------------------------CCcc--hhhHHHHHHHH
Confidence 1 2211 145577889999999999987754210 1111 00222345677
Q ss_pred HHHhhcCCCCchhHHhhccccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHHHHHHHHh
Q psy7457 215 ITLVHLRSETQFPTLLASLKFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAVQVLVLLV 294 (497)
Q Consensus 215 I~ll~Lg~~~~~~~l~~~l~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al~~l~~L~ 294 (497)
.+++..|+.+++..++.......+..++ .. ..-.++...|.+|...|.+.+|...|...+
T Consensus 261 ~~~~~~g~~~~A~~~l~~a~~~~~~~~~--~~------------------~~~~~~~~la~~~~~~g~~~~A~~~l~~al 320 (373)
T 1hz4_A 261 RAQILLGEFEPAEIVLEELNENARSLRL--MS------------------DLNRNLLLLNQLYWQAGRKSDAQRVLLDAL 320 (373)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTC--HH------------------HHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHhCcc--hh------------------hHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 7888888888777776544111122232 11 000123788999999999999999988766
Q ss_pred cC
Q psy7457 295 SS 296 (497)
Q Consensus 295 ~~ 296 (497)
..
T Consensus 321 ~~ 322 (373)
T 1hz4_A 321 KL 322 (373)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 145
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.05 E-value=4.5e-05 Score=64.90 Aligned_cols=98 Identities=6% Similarity=0.003 Sum_probs=88.5
Q ss_pred cHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCCh
Q psy7457 62 ILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRP 141 (497)
Q Consensus 62 n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~ 141 (497)
....+...+..+...|++. +|++.|++.++. .|.+. .+...+|.+|...|+.++|+..+++++...|.. .
T Consensus 12 ~~~~~~~~a~~~~~~~~~~--~A~~~~~~al~~-~~~~~-----~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~--~ 81 (166)
T 1a17_A 12 RAEELKTQANDYFKAKDYE--NAIKFYSQAIEL-NPSNA-----IYYGNRSLAYLRTECYGYALGDATRAIELDKKY--I 81 (166)
T ss_dssp HHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-STTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--H
T ss_pred HHHHHHHHHHHHHHccCHH--HHHHHHHHHHHh-CCCCh-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc--H
Confidence 4678899999999999999 999999999999 88774 688899999999999999999999999999864 5
Q ss_pred hHHHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 142 EHCNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 142 ~~vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
.-...++.++...|+|++|++.+++...
T Consensus 82 ~~~~~~a~~~~~~~~~~~A~~~~~~a~~ 109 (166)
T 1a17_A 82 KGYYRRAASNMALGKFRAALRDYETVVK 109 (166)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 5678889999999999999999988664
No 146
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=98.04 E-value=3.2e-05 Score=65.99 Aligned_cols=97 Identities=9% Similarity=0.005 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCC-h-
Q psy7457 64 DNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIR-P- 141 (497)
Q Consensus 64 ~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~-~- 141 (497)
..+-+....|.+.|++. +|++.|++.+.. .|.+. .+...+|.+|..+|++++|++.++++++..|+... +
T Consensus 9 ~a~~~lG~~~~~~~~~~--~A~~~y~~Al~~-~p~~~-----~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~ 80 (127)
T 4gcn_A 9 IAEKDLGNAAYKQKDFE--KAHVHYDKAIEL-DPSNI-----TFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYK 80 (127)
T ss_dssp HHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHHHHHHcCCHH--HHHHHHHHHHHh-CCCCH-----HHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhH
Confidence 34556778889999999 999999999999 99874 68889999999999999999999999998886543 2
Q ss_pred ---hHHHHHHHHHHhhccHHHHHHHHHHhc
Q psy7457 142 ---EHCNLYLEVLLELKRYETCVEVLRRFA 168 (497)
Q Consensus 142 ---~~vNiLaEL~i~~k~y~~al~~I~~~~ 168 (497)
.-..-+...+..+++|++|++..++.-
T Consensus 81 ~~a~~~~~lg~~~~~~~~~~~A~~~~~kal 110 (127)
T 4gcn_A 81 LIAKAMSRAGNAFQKQNDLSLAVQWFHRSL 110 (127)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 235567788899999999999988754
No 147
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.03 E-value=2e-05 Score=65.79 Aligned_cols=105 Identities=7% Similarity=-0.088 Sum_probs=88.4
Q ss_pred CCChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCcc---HHHHHHHHHHHHHhCCcchhHH
Q psy7457 8 YENPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTI---LDNRARRLRLCDEIGLKNRGFV 84 (497)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n---~~~~~~RA~Ly~elG~~~~~~A 84 (497)
-.+++.|+..++.-.. ..++++|+-+|.+++.. +|++ ...+..++.+|.+.|++. +|
T Consensus 25 ~~~~~~~~~~a~~~~~-----~~~~~~A~~~~~~a~~~-------------~~~~~~~~~~~~~~a~~~~~~~~~~--~A 84 (148)
T 2dba_A 25 ASSVEQLRKEGNELFK-----CGDYGGALAAYTQALGL-------------DATPQDQAVLHRNRAACHLKLEDYD--KA 84 (148)
T ss_dssp CCCHHHHHHHHHHHHT-----TTCHHHHHHHHHHHHTS-------------CCCHHHHHHHHHHHHHHHHHTTCHH--HH
T ss_pred hHHHHHHHHHHHHHHH-----hCCHHHHHHHHHHHHHH-------------cccchHHHHHHHHHHHHHHHHccHH--HH
Confidence 3466777777665543 45677788888887774 6666 899999999999999999 99
Q ss_pred HHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCC
Q psy7457 85 LAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHL 138 (497)
Q Consensus 85 l~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~ 138 (497)
++.|++.++. .|.+. .+.-.+|.+|...|+.++|+..|++++...|+.
T Consensus 85 ~~~~~~~~~~-~~~~~-----~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~ 132 (148)
T 2dba_A 85 ETEASKAIEK-DGGDV-----KALYRRSQALEKLGRLDQAVLDLQRCVSLEPKN 132 (148)
T ss_dssp HHHHHHHHHH-TSCCH-----HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSC
T ss_pred HHHHHHHHhh-CccCH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCc
Confidence 9999999999 88774 677899999999999999999999999999864
No 148
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.02 E-value=4.2e-05 Score=61.15 Aligned_cols=115 Identities=12% Similarity=0.063 Sum_probs=90.5
Q ss_pred hHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHH
Q psy7457 11 PQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQR 90 (497)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~ 90 (497)
+..|+.++..... ..++++|+-+|.+++.. +|.+...++..+.+|.+.|++. +|+..|++
T Consensus 9 ~~~~~~~~~~~~~-----~~~~~~A~~~~~~~~~~-------------~~~~~~~~~~la~~~~~~~~~~--~A~~~~~~ 68 (125)
T 1na0_A 9 AEAWYNLGNAYYK-----QGDYDEAIEYYQKALEL-------------DPNNAEAWYNLGNAYYKQGDYD--EAIEYYQK 68 (125)
T ss_dssp HHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHH-------------CTTCHHHHHHHHHHHHHTTCHH--HHHHHHHH
T ss_pred HHHHHHHHHHHHH-----cCCHHHHHHHHHHHHHH-------------CcCcHHHHHHHHHHHHHhCCHH--HHHHHHHH
Confidence 5667666655433 44667777777776653 6788999999999999999999 99999999
Q ss_pred HHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHh
Q psy7457 91 YLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLE 153 (497)
Q Consensus 91 il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~ 153 (497)
+++. .|.+. .+...+|.+|...|+.++|+..++.++...|+. ......++.++..
T Consensus 69 ~~~~-~~~~~-----~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~--~~~~~~l~~~~~~ 123 (125)
T 1na0_A 69 ALEL-DPNNA-----EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN--AEAKQNLGNAKQK 123 (125)
T ss_dssp HHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--HHHHHHHHHHHHH
T ss_pred HHHh-CCccH-----HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc--HHHHHHHHHHHHh
Confidence 9999 88774 577899999999999999999999999998854 3334444554443
No 149
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.02 E-value=4e-05 Score=59.19 Aligned_cols=87 Identities=10% Similarity=0.038 Sum_probs=72.6
Q ss_pred CCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccC
Q psy7457 58 SKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAH 137 (497)
Q Consensus 58 ~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~ 137 (497)
++|.+...+...+.+|.+.|++. +|++.|++.++. .|.+. .+...+|.+|...|+.++|+..+++++...|+
T Consensus 4 ~~~~~~~~~~~la~~~~~~~~~~--~A~~~~~~a~~~-~~~~~-----~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~ 75 (91)
T 1na3_A 4 DPGNSAEAWYNLGNAYYKQGDYD--EAIEYYQKALEL-DPNNA-----EAWYNLGNAYYKQGDYDEAIEYYQKALELDPN 75 (91)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred cccccHHHHHHHHHHHHHccCHH--HHHHHHHHHHhc-CCCCH-----HHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC
Confidence 45567889999999999999999 999999999999 88774 67789999999999999999999999999886
Q ss_pred CCChhHHHHHHHHHHhh
Q psy7457 138 LIRPEHCNLYLEVLLEL 154 (497)
Q Consensus 138 ~f~~~~vNiLaEL~i~~ 154 (497)
. ......++.++...
T Consensus 76 ~--~~~~~~l~~~~~~~ 90 (91)
T 1na3_A 76 N--AEAKQNLGNAKQKQ 90 (91)
T ss_dssp C--HHHHHHHHHHHHHH
T ss_pred C--HHHHHHHHHHHHhc
Confidence 4 34455566555443
No 150
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.01 E-value=2.9e-05 Score=75.23 Aligned_cols=100 Identities=15% Similarity=0.051 Sum_probs=90.6
Q ss_pred CccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCC
Q psy7457 60 DTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLI 139 (497)
Q Consensus 60 p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f 139 (497)
|.+...+..++..+.+.|++. +|++.|++.++. .|.+. .+...+|.+|...|++++|+..|++++...|+.
T Consensus 1 p~~a~~~~~~g~~~~~~g~~~--~A~~~~~~al~~-~p~~~-----~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~- 71 (281)
T 2c2l_A 1 SPSAQELKEQGNRLFVGRKYP--EAAACYGRAITR-NPLVA-----VYYTNRALCYLKMQQPEQALADCRRALELDGQS- 71 (281)
T ss_dssp CCCHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-CSCCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTC-
T ss_pred ChhHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHh-CCccH-----HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC-
Confidence 567889999999999999999 999999999999 88874 688899999999999999999999999988854
Q ss_pred ChhHHHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 140 RPEHCNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 140 ~~~~vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
+.-.+.++..|..+|+|++|++.+++...
T Consensus 72 -~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 100 (281)
T 2c2l_A 72 -VKAHFFLGQCQLEMESYDEAIANLQRAYS 100 (281)
T ss_dssp -HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 67788999999999999999999988664
No 151
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=97.99 E-value=1.8e-05 Score=77.08 Aligned_cols=167 Identities=8% Similarity=-0.025 Sum_probs=120.3
Q ss_pred ccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCC-ChhhHHHH
Q psy7457 29 VINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDS-DPQTILDL 107 (497)
Q Consensus 29 ~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d-~~~~~~~~ 107 (497)
..++++|+=||-+++...... .+.+.-...+...+.+|.++|++. +|++.|++.+.. .+.. +.......
T Consensus 49 ~g~~~~A~~~~~~al~~~~~~-------~~~~~~a~~~~~lg~~~~~~g~~~--~A~~~~~~Al~l-~~~~g~~~~~a~~ 118 (307)
T 2ifu_A 49 AKQLEQAKDAYLQEAEAHANN-------RSLFHAAKAFEQAGMMLKDLQRMP--EAVQYIEKASVM-YVENGTPDTAAMA 118 (307)
T ss_dssp TTCHHHHHHHHHHHHHHHHHT-------TCHHHHHHHHHHHHHHHHHTTCGG--GGHHHHHHHHHH-HHTTTCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHc-------CCHHHHHHHHHHHHHHHHhCCCHH--HHHHHHHHHHHH-HHHcCCHHHHHHH
Confidence 456667777777766643211 111223567888899999999999 999999999998 6543 23345678
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCCh----hHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCC
Q psy7457 108 STRAAHVYHTARNFPQAASSLAIAFQYSAHLIRP----EHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDST 183 (497)
Q Consensus 108 ~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~----~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e 183 (497)
...+|.+|.. |++++|+..|+++++.+|..-+. .-++-++.+|..+|+|.+|+..+++...... ..
T Consensus 119 ~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~--~~------- 188 (307)
T 2ifu_A 119 LDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYK--EM------- 188 (307)
T ss_dssp HHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH--HT-------
T ss_pred HHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH--Hc-------
Confidence 8899999999 99999999999999988765432 3467789999999999999999988765321 00
Q ss_pred CCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhc
Q psy7457 184 SGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLAS 232 (497)
Q Consensus 184 ~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~ 232 (497)
+... -.......+|.|++.+|+.+.+...+..
T Consensus 189 --------------~~~~---~~~~~~~~~g~~~~~~g~~~~A~~~~~~ 220 (307)
T 2ifu_A 189 --------------ENYP---TCYKKCIAQVLVQLHRADYVAAQKCVRE 220 (307)
T ss_dssp --------------TCHH---HHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred --------------CChh---HHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 0000 0123556778888888998887766543
No 152
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=97.98 E-value=2.8e-05 Score=64.61 Aligned_cols=138 Identities=9% Similarity=-0.040 Sum_probs=106.1
Q ss_pred HhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCC-C
Q psy7457 22 LSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDS-D 100 (497)
Q Consensus 22 ~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d-~ 100 (497)
++..-....++++|+-+|.+++...+.. .+.+.-...+...+.+|...|++. +|++.|++.++. .|.. +
T Consensus 15 l~~~~~~~~~~~~A~~~~~~al~~~~~~-------~~~~~~~~~~~~l~~~~~~~g~~~--~A~~~~~~a~~~-~~~~~~ 84 (164)
T 3ro3_A 15 LGNTHYLLGNFRDAVIAHEQRLLIAKEF-------GDKAAERIAYSNLGNAYIFLGEFE--TASEYYKKTLLL-ARQLKD 84 (164)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHH-------TCHHHHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-HHHTTC
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHh-------CCchHHHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHH-HHHhCC
Confidence 3333344568899999999988754322 111122358889999999999999 999999999988 5543 2
Q ss_pred hhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCC----hhHHHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 101 PQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIR----PEHCNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 101 ~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~----~~~vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
......+...+|.+|...|+.++|+..+++++...+..-+ ..-...++.++...|++++|++.+++...
T Consensus 85 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 157 (164)
T 3ro3_A 85 RAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLE 157 (164)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 3444567889999999999999999999999997654432 23467889999999999999999987654
No 153
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=97.98 E-value=1e-05 Score=66.76 Aligned_cols=105 Identities=8% Similarity=-0.079 Sum_probs=82.9
Q ss_pred hHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccH---HHHHHHHHHHHHhCCcchhHHHHH
Q psy7457 11 PQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTIL---DNRARRLRLCDEIGLKNRGFVLAG 87 (497)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~---~~~~~RA~Ly~elG~~~~~~Al~~ 87 (497)
|+.++..+...+ +..++++|+=+|.+++.. +|++. +.++..+.+|.+.|++. +|++.
T Consensus 2 ~~~~~~~a~~~~-----~~~~~~~A~~~~~~~~~~-------------~p~~~~~~~~~~~lg~~~~~~~~~~--~A~~~ 61 (129)
T 2xev_A 2 ARTAYNVAFDAL-----KNGKYDDASQLFLSFLEL-------------YPNGVYTPNALYWLGESYYATRNFQ--LAEAQ 61 (129)
T ss_dssp -CCHHHHHHHHH-----HTTCHHHHHHHHHHHHHH-------------CSSSTTHHHHHHHHHHHHHHTTCHH--HHHHH
T ss_pred cHHHHHHHHHHH-----HhCCHHHHHHHHHHHHHH-------------CCCCcccHHHHHHHHHHHHHhccHH--HHHHH
Confidence 344455444433 345667777777766653 56666 89999999999999999 99999
Q ss_pred HHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCC
Q psy7457 88 YQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHL 138 (497)
Q Consensus 88 y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~ 138 (497)
|+++++. .|.+. ...++.-.+|.+|...|+.++|+..|+.++..+|+.
T Consensus 62 ~~~~~~~-~p~~~--~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~ 109 (129)
T 2xev_A 62 FRDLVSR-YPTHD--KAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGS 109 (129)
T ss_dssp HHHHHHH-CTTST--THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTS
T ss_pred HHHHHHH-CCCCc--ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCC
Confidence 9999999 89874 123678899999999999999999999999999864
No 154
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=97.97 E-value=1.3e-05 Score=72.31 Aligned_cols=122 Identities=9% Similarity=-0.117 Sum_probs=97.0
Q ss_pred HHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCcc----------------HHHHHHHHHHHHH
Q psy7457 12 QEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTI----------------LDNRARRLRLCDE 75 (497)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n----------------~~~~~~RA~Ly~e 75 (497)
+.|...++..+ ...+.++|+-+|.+++.. .|++ ...+..++.+|.+
T Consensus 39 ~~~~~~g~~~~-----~~~~~~~A~~~~~~al~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~ 100 (198)
T 2fbn_A 39 FDIKEEGNEFF-----KKNEINEAIVKYKEALDF-------------FIHTEEWDDQILLDKKKNIEISCNLNLATCYNK 100 (198)
T ss_dssp HHHHHHHHHHH-----HTTCHHHHHHHHHHHHHT-------------TTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-----HcCCHHHHHHHHHHHHHH-------------HhcccccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444433 356778888899888874 2333 2889999999999
Q ss_pred hCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhhc
Q psy7457 76 IGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLELK 155 (497)
Q Consensus 76 lG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k 155 (497)
+|++. +|++.|++.++. .|.+. .+.-.+|.+|...|++++|+..|++++...|+. ..-.+.+..++...+
T Consensus 101 ~~~~~--~A~~~~~~al~~-~p~~~-----~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~l~~~~~~~~ 170 (198)
T 2fbn_A 101 NKDYP--KAIDHASKVLKI-DKNNV-----KALYKLGVANMYFGFLEEAKENLYKAASLNPNN--LDIRNSYELCVNKLK 170 (198)
T ss_dssp TTCHH--HHHHHHHHHHHH-STTCH-----HHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC--HHHHHHHHHHHHHHH
T ss_pred hcCHH--HHHHHHHHHHHh-CcccH-----HHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCc--HHHHHHHHHHHHHHH
Confidence 99999 999999999999 88774 678899999999999999999999999999864 556777788888877
Q ss_pred cHHHHH
Q psy7457 156 RYETCV 161 (497)
Q Consensus 156 ~y~~al 161 (497)
++.++-
T Consensus 171 ~~~~~~ 176 (198)
T 2fbn_A 171 EARKKD 176 (198)
T ss_dssp HHHC--
T ss_pred HHHHHH
Confidence 777766
No 155
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=97.96 E-value=1.8e-05 Score=82.53 Aligned_cols=143 Identities=6% Similarity=-0.136 Sum_probs=105.9
Q ss_pred hHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhH--HHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHH
Q psy7457 11 PQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHI--LIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGY 88 (497)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~--~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y 88 (497)
+..|...++.... ..+.++|+-+|.+++..+..... -......+|.....+..++..|.++|++. +|++.|
T Consensus 268 a~~~~~~G~~~~~-----~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~--~A~~~~ 340 (457)
T 1kt0_A 268 AAIVKEKGTVYFK-----GGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYT--KAVECC 340 (457)
T ss_dssp HHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHH--HHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHH--HHHHHH
Confidence 3455555555544 45678899999998875211100 00000001112789999999999999999 999999
Q ss_pred HHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhc
Q psy7457 89 QRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFA 168 (497)
Q Consensus 89 ~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~ 168 (497)
+++++. .|.+. .+.-.+|.+|..+|++++|+..|++++...|+.. .-.+.+..++..+++++++.+.+-+.+
T Consensus 341 ~~al~~-~p~~~-----~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~--~a~~~l~~~~~~~~~~~~a~~~~~~~~ 412 (457)
T 1kt0_A 341 DKALGL-DSANE-----KGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNK--AARLQISMCQKKAKEHNERDRRIYANM 412 (457)
T ss_dssp HHHHHH-STTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHTTC------CHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHhc-CCccH-----HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999 89874 6888999999999999999999999999998653 567888999999999999988765543
No 156
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=97.93 E-value=2.5e-05 Score=79.58 Aligned_cols=125 Identities=11% Similarity=-0.047 Sum_probs=102.8
Q ss_pred ccCCccceehhhcccCcchhh---hHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHH
Q psy7457 29 VINPDESRYILSRVRTPKKIE---HILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTIL 105 (497)
Q Consensus 29 ~~~~~~~~y~~~r~~~~~~~~---~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~ 105 (497)
..+.++|+-+|.+++...... .-..++...+|.+...+..++.+|.++|++. +|++.|+++++. .|.+.
T Consensus 236 ~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~--~A~~~~~~al~~-~p~~~----- 307 (370)
T 1ihg_A 236 SQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQ--GAVDSCLEALEI-DPSNT----- 307 (370)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHTT-CTTCH-----
T ss_pred hcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHH--HHHHHHHHHHHh-CchhH-----
Confidence 567889999999999732110 0112333457888999999999999999999 999999999999 88774
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhhccHHHHHHH
Q psy7457 106 DLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVEV 163 (497)
Q Consensus 106 ~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~ 163 (497)
.+.-.+|.+|...|++++|++.|+++++..|+ +..-...++.++...++++++.+.
T Consensus 308 ~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~--~~~~~~~l~~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 308 KALYRRAQGWQGLKEYDQALADLKKAQEIAPE--DKAIQAELLKVKQKIKAQKDKEKA 363 (370)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68889999999999999999999999999996 356677888888888888877654
No 157
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=97.93 E-value=1.9e-05 Score=82.99 Aligned_cols=105 Identities=12% Similarity=-0.018 Sum_probs=85.4
Q ss_pred HHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q psy7457 52 LIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIA 131 (497)
Q Consensus 52 ~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a 131 (497)
+.+|...+|++...+..++.+|.++|++. +|++.|++.++. .|.+. .+...+|.+|..+|+.++|++.|+++
T Consensus 29 ~~~Al~~~p~~~~~~~~lg~~~~~~g~~~--~A~~~~~~al~l-~p~~~-----~~~~~lg~~~~~~g~~~eA~~~~~~a 100 (477)
T 1wao_1 29 YSQAIELNPSNAIYYGNRSLAYLRTECYG--YALGDATRAIEL-DKKYI-----KGYYRRAASNMALGKFRAALRDYETV 100 (477)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHS-CTTCH-----HHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHhCCccHHHHHHHHHHHHHhcCHH--HHHHHHHHHHHh-CCCCH-----HHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 34444458999999999999999999999 999999999999 88774 67889999999999999999999999
Q ss_pred HHHccCCCChhHHHHHHHH--HHhhccHHHHHHHHHH
Q psy7457 132 FQYSAHLIRPEHCNLYLEV--LLELKRYETCVEVLRR 166 (497)
Q Consensus 132 ~~~~~~~f~~~~vNiLaEL--~i~~k~y~~al~~I~~ 166 (497)
++..|+... ....++.+ ++.+++|++|++...+
T Consensus 101 l~~~p~~~~--~~~~l~~~~~~~~~g~~~~A~~~~~~ 135 (477)
T 1wao_1 101 VKVKPHDKD--AKMKYQECNKIVKQKAFERAIAGDEH 135 (477)
T ss_dssp HHHSTTCTT--HHHHHHHHHHHHHHHHHCCC------
T ss_pred HHhCCCCHH--HHHHHHHHHHHHHHHHHHHHhccccc
Confidence 999997643 34445555 8889999999998774
No 158
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=97.91 E-value=0.00013 Score=64.26 Aligned_cols=170 Identities=11% Similarity=-0.022 Sum_probs=118.1
Q ss_pred HhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCCh----hHHHHHHHH
Q psy7457 75 EIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRP----EHCNLYLEV 150 (497)
Q Consensus 75 elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~----~~vNiLaEL 150 (497)
..|++. +|.+.++.+... |... ..+...+|.+|...|++++|+..+++++.......+. .-.+.++.+
T Consensus 4 ~~g~~~--~A~~~~~~~~~~--~~~~----~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~ 75 (203)
T 3gw4_A 4 EAHDYA--LAERQAQALLAH--PATA----SGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMV 75 (203)
T ss_dssp ---CHH--HHHHHHHHHHTS--TTTH----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred ccccHH--HHHHHHHHhcCC--hHHH----HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHH
Confidence 467888 888866555444 5433 4788999999999999999999999999976554332 347788999
Q ss_pred HHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHh
Q psy7457 151 LLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLL 230 (497)
Q Consensus 151 ~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~ 230 (497)
|...|+|++|++.+.+.....- . .|++.. .-.....-+|.++..+|+.+.+...+
T Consensus 76 ~~~~g~~~~A~~~~~~al~~~~---~--------------------~~~~~~--~~~~~~~~lg~~~~~~g~~~~A~~~~ 130 (203)
T 3gw4_A 76 ERMAGNWDAARRCFLEERELLA---S--------------------LPEDPL--AASANAYEVATVALHFGDLAGARQEY 130 (203)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHH---H--------------------SCCCHH--HHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHHH---H--------------------cCccHH--HHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 9999999999999988665321 0 011100 02456778899999999988877776
Q ss_pred hccccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHHHHHHHHhcCC
Q psy7457 231 ASLKFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAVQVLVLLVSSE 297 (497)
Q Consensus 231 ~~l~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al~~l~~L~~~~ 297 (497)
.....-....++ .+ ..-..+..+|.++...|++++|+.+|...+..-
T Consensus 131 ~~al~~~~~~~~--~~------------------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 177 (203)
T 3gw4_A 131 EKSLVYAQQADD--QV------------------AIACAFRGLGDLAQQEKNLLEAQQHWLRARDIF 177 (203)
T ss_dssp HHHHHHHHHTTC--HH------------------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccc--hH------------------HHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHH
Confidence 544111223344 22 011234889999999999999999998776543
No 159
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=97.90 E-value=2.9e-05 Score=68.53 Aligned_cols=132 Identities=10% Similarity=-0.045 Sum_probs=104.4
Q ss_pred cccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCC--ChhhHH
Q psy7457 28 QVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDS--DPQTIL 105 (497)
Q Consensus 28 ~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d--~~~~~~ 105 (497)
...++++|+-+|.+++..- +..-.+|.....+...+.+|...|++. +|++.|++.++. .+.. +.....
T Consensus 38 ~~g~~~~A~~~~~~al~~~-------~~~~~~~~~~~~~~~l~~~~~~~g~~~--~A~~~~~~al~~-~~~~~~~~~~~~ 107 (203)
T 3gw4_A 38 FMDRFDEARASFQALQQQA-------QKSGDHTAEHRALHQVGMVERMAGNWD--AARRCFLEEREL-LASLPEDPLAAS 107 (203)
T ss_dssp HTTCHHHHHHHHHHHHHHH-------HTTCCHHHHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-HHHSCCCHHHHH
T ss_pred HhCcHHHHHHHHHHHHHHH-------HHcCCcHHHHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHH-HHHcCccHHHHH
Confidence 3457788888888887732 222345667889999999999999999 999999998887 4322 122456
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChh----HHHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 106 DLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPE----HCNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 106 ~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~----~vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
.+...+|.+|...|++++|+..+++++...+...+.. -...++.++...|+|++|++.+++...
T Consensus 108 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 175 (203)
T 3gw4_A 108 ANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARD 175 (203)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHH
Confidence 6788999999999999999999999998776544432 257889999999999999999988665
No 160
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=97.90 E-value=2.7e-05 Score=75.38 Aligned_cols=103 Identities=15% Similarity=0.043 Sum_probs=89.0
Q ss_pred ChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHH
Q psy7457 10 NPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQ 89 (497)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~ 89 (497)
+++.|+..++....+ .+.++|+-+|.+++.. +|++...+..++.+|.++|++. +|++.|+
T Consensus 3 ~a~~~~~~g~~~~~~-----g~~~~A~~~~~~al~~-------------~p~~~~~~~~la~~~~~~~~~~--~A~~~~~ 62 (281)
T 2c2l_A 3 SAQELKEQGNRLFVG-----RKYPEAAACYGRAITR-------------NPLVAVYYTNRALCYLKMQQPE--QALADCR 62 (281)
T ss_dssp CHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHH-------------CSCCHHHHHHHHHHHHHTTCHH--HHHHHHH
T ss_pred hHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHh-------------CCccHHHHHHHHHHHHHhcCHH--HHHHHHH
Confidence 567777777766544 4567778788777764 8899999999999999999999 9999999
Q ss_pred HHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCC
Q psy7457 90 RYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHL 138 (497)
Q Consensus 90 ~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~ 138 (497)
++++. .|.+. .+.-.+|.+|...|+.++|+..|++++...|+.
T Consensus 63 ~al~~-~p~~~-----~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 63 RALEL-DGQSV-----KAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp HHTTS-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHh-CCCCH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 99999 88774 688899999999999999999999999988754
No 161
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=97.88 E-value=2.7e-05 Score=81.12 Aligned_cols=137 Identities=9% Similarity=0.019 Sum_probs=111.5
Q ss_pred hhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCC----------hhhHHHHHHHHHHHHHhcCCHHH
Q psy7457 54 QRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSD----------PQTILDLSTRAAHVYHTARNFPQ 123 (497)
Q Consensus 54 ~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~----------~~~~~~~~k~LA~~Y~e~~~~~~ 123 (497)
++...+|++...+..++..|.+.|++. +|+..|++.++. .|.+. ......+...+|.+|..++++++
T Consensus 259 ~~~~~~~~~a~~~~~~G~~~~~~g~~~--~A~~~y~~Al~~-~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~ 335 (457)
T 1kt0_A 259 MDTKEKLEQAAIVKEKGTVYFKGGKYM--QAVIQYGKIVSW-LEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTK 335 (457)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-HTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHhCCCHH--HHHHHHHHHHHH-hcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 344456788999999999999999999 999999999999 89873 11224678899999999999999
Q ss_pred HHHHHHHHHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCC
Q psy7457 124 AASSLAIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNL 203 (497)
Q Consensus 124 Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l 203 (497)
|+..|.+++...|.. ..-+.-++..|..+++|++|+..+++..... |.+
T Consensus 336 A~~~~~~al~~~p~~--~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~--------------------------P~~--- 384 (457)
T 1kt0_A 336 AVECCDKALGLDSAN--EKGLYRRGEAQLLMNEFESAKGDFEKVLEVN--------------------------PQN--- 384 (457)
T ss_dssp HHHHHHHHHHHSTTC--HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC--------------------------------
T ss_pred HHHHHHHHHhcCCcc--HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--------------------------CCC---
Confidence 999999999999974 5668889999999999999999998866421 343
Q ss_pred CCCcchhHHHHHHHhhcCCCCchh
Q psy7457 204 VPPPEILSKFVITLVHLRSETQFP 227 (497)
Q Consensus 204 ~lPiDLr~KLgI~ll~Lg~~~~~~ 227 (497)
.+++..++.++.++|+.+.++
T Consensus 385 ---~~a~~~l~~~~~~~~~~~~a~ 405 (457)
T 1kt0_A 385 ---KAARLQISMCQKKAKEHNERD 405 (457)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHHHHH
Confidence 257788888888888766543
No 162
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.88 E-value=0.0001 Score=73.21 Aligned_cols=179 Identities=9% Similarity=-0.029 Sum_probs=131.2
Q ss_pred HHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCCh------------hhHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q psy7457 65 NRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDP------------QTILDLSTRAAHVYHTARNFPQAASSLAIAF 132 (497)
Q Consensus 65 ~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~------------~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~ 132 (497)
.+.++|.-+.+.|++. +|++.|+++++. .|.... .+.-+.+..|+.+|.+.|+.++|++.|..+.
T Consensus 6 ~~l~~a~~l~~~~~y~--eA~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~ 82 (434)
T 4b4t_Q 6 SKLEEARRLVNEKQYN--EAEQVYLSLLDK-DSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHST 82 (434)
T ss_dssp HHHHHHHHHHHHTCHH--HHHHHHHHHHHS-CCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHCCCHH--HHHHHHHHHHhh-CcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 5788899999999999 999999999999 776541 2233568899999999999999999999999
Q ss_pred HHccCCCCh----hHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcc
Q psy7457 133 QYSAHLIRP----EHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPE 208 (497)
Q Consensus 133 ~~~~~~f~~----~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiD 208 (497)
...+..-+. .-.+++.-++...+.++++++..+....+.- .. ...+ +-..
T Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~--~~---------------------~~~~---~~~~ 136 (434)
T 4b4t_Q 83 EYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAK--RE---------------------KRVF---LKHS 136 (434)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHH--HS---------------------SCCS---SHHH
T ss_pred HHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH--Hh---------------------CccH---HHHH
Confidence 987765322 2244555566667899999999887665321 00 1111 1456
Q ss_pred hhHHHHHHHhhcCCCCchhHHhhcc-cc--Ccc-cccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHH
Q psy7457 209 ILSKFVITLVHLRSETQFPTLLASL-KF--DVE-MYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEA 284 (497)
Q Consensus 209 Lr~KLgI~ll~Lg~~~~~~~l~~~l-~e--~~e-e~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~ 284 (497)
+..+||.++...|+..++..++..+ .+ ... ....+|.+ +..|.+|...|+|.
T Consensus 137 ~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~ 192 (434)
T 4b4t_Q 137 LSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVH------------------------LLESKVYHKLRNLA 192 (434)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHH------------------------HHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHH------------------------HHHHHHHHHhCcHH
Confidence 7789999999999988877776655 22 111 11112244 99999999999999
Q ss_pred HHHHHHHHHhcC
Q psy7457 285 YAVQVLVLLVSS 296 (497)
Q Consensus 285 ~Al~~l~~L~~~ 296 (497)
.|..+|......
T Consensus 193 ~A~~~~~~al~~ 204 (434)
T 4b4t_Q 193 KSKASLTAARTA 204 (434)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999876543
No 163
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=97.88 E-value=0.0001 Score=66.35 Aligned_cols=132 Identities=11% Similarity=0.070 Sum_probs=106.0
Q ss_pred CCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChh-----------hHHHHHHHHHHHHHhcCCHHHHHHH
Q psy7457 59 KDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQ-----------TILDLSTRAAHVYHTARNFPQAASS 127 (497)
Q Consensus 59 ~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~-----------~~~~~~k~LA~~Y~e~~~~~~Ai~~ 127 (497)
.++....+..++..+...|++. +|++.|++.++. .|.+... ....+...+|.+|...|++++|+..
T Consensus 34 ~~~~~~~~~~~g~~~~~~~~~~--~A~~~~~~al~~-~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~ 110 (198)
T 2fbn_A 34 KVQSAFDIKEEGNEFFKKNEIN--EAIVKYKEALDF-FIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDH 110 (198)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHT-TTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHH-HhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 4456788999999999999999 999999999999 8887510 0125778999999999999999999
Q ss_pred HHHHHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCc
Q psy7457 128 LAIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPP 207 (497)
Q Consensus 128 le~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPi 207 (497)
++.++...|.. ..-...++.+|..+|+|++|++.+++..... |. ..
T Consensus 111 ~~~al~~~p~~--~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~--------------------------p~------~~ 156 (198)
T 2fbn_A 111 ASKVLKIDKNN--VKALYKLGVANMYFGFLEEAKENLYKAASLN--------------------------PN------NL 156 (198)
T ss_dssp HHHHHHHSTTC--HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS--------------------------TT------CH
T ss_pred HHHHHHhCccc--HHHHHHHHHHHHHcccHHHHHHHHHHHHHHC--------------------------CC------cH
Confidence 99999998864 4667889999999999999999998876421 33 34
Q ss_pred chhHHHHHHHhhcCCCCchh
Q psy7457 208 EILSKFVITLVHLRSETQFP 227 (497)
Q Consensus 208 DLr~KLgI~ll~Lg~~~~~~ 227 (497)
+++..++.|+..+|.....+
T Consensus 157 ~~~~~l~~~~~~~~~~~~~~ 176 (198)
T 2fbn_A 157 DIRNSYELCVNKLKEARKKD 176 (198)
T ss_dssp HHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 67777888887777655433
No 164
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=97.82 E-value=0.0002 Score=68.78 Aligned_cols=167 Identities=11% Similarity=0.011 Sum_probs=115.0
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCCh----hHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCC
Q psy7457 104 ILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRP----EHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFP 179 (497)
Q Consensus 104 ~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~----~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~ 179 (497)
....+.+.+..+...+++++|++.++.+.+..+..-+. .-.+.++..+...++|++|++.+++.-.... ..
T Consensus 74 ~~~~l~~~i~~~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~--~~--- 148 (293)
T 3u3w_A 74 RKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQL--TG--- 148 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCC--CC---
T ss_pred hHHHHHHHHHHHHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhc--cc---
Confidence 34556677899999999999999999999866543221 1233467788888899999999988665221 00
Q ss_pred CCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhccccCcccc-cccchhhhhHHHHHHHHH
Q psy7457 180 QDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLASLKFDVEMY-GTITVYLDIAEALIQEHY 258 (497)
Q Consensus 180 ~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l~e~~ee~-~D~~Ly~~~~~~~~~~~~ 258 (497)
.+. ..-+.+..-+|.+...+|+.+.+...+....+..+.. ++ -.
T Consensus 149 -------------------~~~--~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~--~~------------ 193 (293)
T 3u3w_A 149 -------------------IDV--YQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDN--EE------------ 193 (293)
T ss_dssp -------------------SCT--THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCC--HH------------
T ss_pred -------------------ccH--HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccc--hh------------
Confidence 111 0024567889999999999888776654441101111 11 00
Q ss_pred HHHHHHhhhhhhHHHHHHHHhcccHHHHHHHHHHHhcCC-----CCChHHHHHHHHHHHHHhh
Q psy7457 259 EAYAVQFKELVYLDIAEALIQEHYEAYAVQVLVLLVSSE-----KYNQPGVWKQLAETYEKSE 316 (497)
Q Consensus 259 ~~~~~~~~~~~~ldvaeAl~e~g~y~~Al~~l~~L~~~~-----~y~~~~vwl~lAeCy~~l~ 316 (497)
..-.++..+|.+|.+.|.|++|+.++...+... .+..+.++..+|.||.+++
T Consensus 194 ------~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g 250 (293)
T 3u3w_A 194 ------FDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLE 250 (293)
T ss_dssp ------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTT
T ss_pred ------HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhC
Confidence 001234999999999999999999998776432 3456889999999999987
No 165
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=97.82 E-value=2.9e-05 Score=62.08 Aligned_cols=71 Identities=11% Similarity=0.118 Sum_probs=64.7
Q ss_pred cHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCC
Q psy7457 62 ILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIR 140 (497)
Q Consensus 62 n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~ 140 (497)
+.+.+..++..+...|++. +|++.|++.++. .|.+. .+...+|.+|...|+.++|+..+++++...|+..+
T Consensus 3 ~~~~~~~~g~~~~~~~~~~--~A~~~~~~al~~-~p~~~-----~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~ 73 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYR--EAVHCYDQLITA-QPQNP-----VGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEH 73 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHH--HHHHHHHHHHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTS
T ss_pred hHHHHHHHHHHHHHcCCHH--HHHHHHHHHHhc-CCCCH-----HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccH
Confidence 4678899999999999999 999999999999 88874 67889999999999999999999999999997633
No 166
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.79 E-value=0.00074 Score=80.35 Aligned_cols=214 Identities=14% Similarity=0.117 Sum_probs=126.3
Q ss_pred HHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCC-CCh
Q psy7457 63 LDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHL-IRP 141 (497)
Q Consensus 63 ~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~-f~~ 141 (497)
.+.+.+.|..+...|+++ .|++.|.+. .+. +...++|..|.+.|++++||+.|..+.+..++. ++-
T Consensus 1105 p~vWsqLAKAql~~G~~k--EAIdsYiKA------dD~-----say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt 1171 (1630)
T 1xi4_A 1105 PAVWSQLAKAQLQKGMVK--EAIDSYIKA------DDP-----SSYMEVVQAANTSGNWEELVKYLQMARKKARESYVET 1171 (1630)
T ss_pred HHHHHHHHHHHHhCCCHH--HHHHHHHhc------CCh-----HHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccH
Confidence 456667777777778888 888887553 121 344567777788888888888887777765442 222
Q ss_pred hHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCc-cccccccccccCCCCCCCCCcchhHHHHHHHhhc
Q psy7457 142 EHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGE-ESNIQITNYTVPSDPNLVPPPEILSKFVITLVHL 220 (497)
Q Consensus 142 ~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~-~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~L 220 (497)
+ ++..|.++++++..-..|.....--+.. .+ |.-++. .-......+...+ --.|++.|++++
T Consensus 1172 ~----LafaYAKl~rleele~fI~~~n~ad~~~-iG---d~le~eg~YeeA~~~Y~kA~---------ny~rLA~tLvkL 1234 (1630)
T 1xi4_A 1172 E----LIFALAKTNRLAELEEFINGPNNAHIQQ-VG---DRCYDEKMYDAAKLLYNNVS---------NFGRLASTLVHL 1234 (1630)
T ss_pred H----HHHHHHhhcCHHHHHHHHhCCCHHHHHH-HH---HHHHhcCCHHHHHHHHHhhh---------HHHHHHHHHHHh
Confidence 2 5556666666664333332110000000 00 000000 0000000111122 347999999999
Q ss_pred CCCCchhHHhhccccCcccccccchhhhhHHHHHHHH-HHHHHHHhhhh-----hhHHHHHHHHhcccHHHHHHHHHHHh
Q psy7457 221 RSETQFPTLLASLKFDVEMYGTITVYLDIAEALIQEH-YEAYAVQFKEL-----VYLDIAEALIQEHYEAYAVQVLVLLV 294 (497)
Q Consensus 221 g~~~~~~~l~~~l~e~~ee~~D~~Ly~~~~~~~~~~~-~~~~~~~~~~~-----~~ldvaeAl~e~g~y~~Al~~l~~L~ 294 (497)
|+.+.+-.....- .+..-+..++.+.++.. |+++....+.. -+-+++..|...|.|++|+.+|+.-+
T Consensus 1235 ge~q~AIEaarKA-------~n~~aWkev~~acve~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL 1307 (1630)
T 1xi4_A 1235 GEYQAAVDGARKA-------NSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAAL 1307 (1630)
T ss_pred CCHHHHHHHHHHh-------CCHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 9976655443211 22124445555555443 77777777532 34588889999999999999999999
Q ss_pred cCCCCChHHHHHHHHHHHHH
Q psy7457 295 SSEKYNQPGVWKQLAETYEK 314 (497)
Q Consensus 295 ~~~~y~~~~vwl~lAeCy~~ 314 (497)
..+ -.-..+|..+|.+|.+
T Consensus 1308 ~Le-raH~gmftELaiLyaK 1326 (1630)
T 1xi4_A 1308 GLE-RAHMGMFTELAILYSK 1326 (1630)
T ss_pred ccC-hhHhHHHHHHHHHHHh
Confidence 887 5566689888888766
No 167
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=97.78 E-value=4.5e-05 Score=63.29 Aligned_cols=88 Identities=19% Similarity=0.274 Sum_probs=72.8
Q ss_pred HhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhh
Q psy7457 75 EIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLEL 154 (497)
Q Consensus 75 elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~ 154 (497)
.+|++. +|++.|++.++. .|.++ ....+...+|.+|...|++++|+..+++++...|+. ..-...++..|..+
T Consensus 2 ~~g~~~--~A~~~~~~al~~-~~~~p--~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~l~~~~~~~ 74 (117)
T 3k9i_A 2 VLGLEA--QAVPYYEKAIAS-GLQGK--DLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNH--QALRVFYAMVLYNL 74 (117)
T ss_dssp -----C--CCHHHHHHHHSS-CCCHH--HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--HHHHHHHHHHHHHH
T ss_pred CCCcHH--HHHHHHHHHHHc-CCCCc--cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc--hHHHHHHHHHHHHc
Confidence 468899 999999999998 64332 234788999999999999999999999999999976 66788899999999
Q ss_pred ccHHHHHHHHHHhch
Q psy7457 155 KRYETCVEVLRRFAN 169 (497)
Q Consensus 155 k~y~~al~~I~~~~~ 169 (497)
|+|++|+..+++...
T Consensus 75 g~~~~A~~~~~~al~ 89 (117)
T 3k9i_A 75 GRYEQGVELLLKIIA 89 (117)
T ss_dssp TCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 999999999988664
No 168
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=97.76 E-value=5.4e-05 Score=65.99 Aligned_cols=119 Identities=11% Similarity=-0.047 Sum_probs=91.5
Q ss_pred CCCChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHH-----HhhcCCCCccHHHHHHHHHHHHHhCCcch
Q psy7457 7 SYENPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHIL-----IQRGLSKDTILDNRARRLRLCDEIGLKNR 81 (497)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~-----~~~~~~~p~n~~~~~~RA~Ly~elG~~~~ 81 (497)
..+..+.|...+|..+. ..+.++|+-+|.+++..-....-. ......+|.+...+..++..|.++|++.
T Consensus 7 ~~~~a~~~~~~G~~~~~-----~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~- 80 (162)
T 3rkv_A 7 KLKSVEALRQKGNELFV-----QKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLH- 80 (162)
T ss_dssp -CHHHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHH-
T ss_pred HHHHHHHHHHHHHHHHH-----cCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHH-
Confidence 34455666777766654 356789999999998741100000 0000115677899999999999999999
Q ss_pred hHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCC
Q psy7457 82 GFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHL 138 (497)
Q Consensus 82 ~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~ 138 (497)
+|+..|+++++. -|.+. ...-.+|.+|...|++++|+..|+.++...|+.
T Consensus 81 -~A~~~~~~al~~-~p~~~-----~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~ 130 (162)
T 3rkv_A 81 -EAEETSSEVLKR-EETNE-----KALFRRAKARIAAWKLDEAEEDLKLLLRNHPAA 130 (162)
T ss_dssp -HHHHHHHHHHHH-STTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGG
T ss_pred -HHHHHHHHHHhc-CCcch-----HHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCC
Confidence 999999999999 88874 688899999999999999999999999999964
No 169
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=97.65 E-value=0.00024 Score=61.83 Aligned_cols=103 Identities=7% Similarity=0.001 Sum_probs=88.4
Q ss_pred cHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCC--------CCC-----hhhHHHHHHHHHHHHHhcCCHHHHHHHH
Q psy7457 62 ILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITP--------DSD-----PQTILDLSTRAAHVYHTARNFPQAASSL 128 (497)
Q Consensus 62 n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P--------~d~-----~~~~~~~~k~LA~~Y~e~~~~~~Ai~~l 128 (497)
....+..++..+.+.|++. .|++.|++.+.. +| .+. ......+.-.+|.+|...|++++|+..+
T Consensus 10 ~a~~~~~~G~~~~~~~~~~--~A~~~y~~al~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~ 86 (162)
T 3rkv_A 10 SVEALRQKGNELFVQKDYK--EAIDAYRDALTR-LDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETS 86 (162)
T ss_dssp HHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-HHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHH-HHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 4678899999999999999 999999999997 43 221 2233568889999999999999999999
Q ss_pred HHHHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 129 AIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 129 e~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
+.++...|.. ..-...++..|..+|+|++|+..+++...
T Consensus 87 ~~al~~~p~~--~~a~~~~g~~~~~~g~~~~A~~~~~~al~ 125 (162)
T 3rkv_A 87 SEVLKREETN--EKALFRRAKARIAAWKLDEAEEDLKLLLR 125 (162)
T ss_dssp HHHHHHSTTC--HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHhcCCcc--hHHHHHHHHHHHHHhcHHHHHHHHHHHHh
Confidence 9999999864 56788899999999999999999988765
No 170
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=97.63 E-value=0.00026 Score=58.71 Aligned_cols=104 Identities=11% Similarity=0.015 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCC-ChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCCh
Q psy7457 63 LDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDS-DPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRP 141 (497)
Q Consensus 63 ~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d-~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~ 141 (497)
...+...+.+|...|++. +|++.|++.++. .|.. +......+...+|.+|...|++++|+..++.++...+..-+.
T Consensus 9 ~~~~~~l~~~~~~~~~~~--~A~~~~~~al~~-~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 85 (164)
T 3ro3_A 9 GRAFGNLGNTHYLLGNFR--DAVIAHEQRLLI-AKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDR 85 (164)
T ss_dssp HHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-HHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHhcCHH--HHHHHHHHHHHH-HHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCc
Confidence 567889999999999999 999999999998 6643 234445688899999999999999999999999987654332
Q ss_pred ----hHHHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 142 ----EHCNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 142 ----~~vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
.-...++.++...|+|++|++.+++...
T Consensus 86 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 117 (164)
T 3ro3_A 86 AVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLA 117 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 3467789999999999999999988664
No 171
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=97.62 E-value=0.0012 Score=60.90 Aligned_cols=172 Identities=12% Similarity=-0.043 Sum_probs=126.5
Q ss_pred HHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcC----CHHHHHH
Q psy7457 51 ILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTAR----NFPQAAS 126 (497)
Q Consensus 51 ~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~----~~~~Ai~ 126 (497)
++.+|+. ..|.+..+.-+.+|.+.|++. +|++.|++..+. .. ....-.|+.+|.. + +.++|+.
T Consensus 8 ~~~~aa~--~g~~~a~~~lg~~~~~~~~~~--~A~~~~~~a~~~----g~----~~a~~~lg~~y~~-~g~~~~~~~A~~ 74 (212)
T 3rjv_A 8 QYQQQAE--AGDRRAQYYLADTWVSSGDYQ--KAEYWAQKAAAQ----GD----GDALALLAQLKIR-NPQQADYPQARQ 74 (212)
T ss_dssp HHHHHHH--TTCHHHHHHHHHHHHHHTCHH--HHHHHHHHHHHT----TC----HHHHHHHHHHTTS-STTSCCHHHHHH
T ss_pred HHHHHHH--CCCHHHHHHHHHHHhcCCCHH--HHHHHHHHHHHc----CC----HHHHHHHHHHHHc-CCCCCCHHHHHH
Confidence 4445543 267899999999999999999 999999999887 22 2577899999998 7 9999999
Q ss_pred HHHHHHHHccCCCChhHHHHHHHHHHh----hccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCC
Q psy7457 127 SLAIAFQYSAHLIRPEHCNLYLEVLLE----LKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPN 202 (497)
Q Consensus 127 ~le~a~~~~~~~f~~~~vNiLaEL~i~----~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~ 202 (497)
.|+++.+. -.....+.|+.+|.. .+++++|++++++.+..- |.+-
T Consensus 75 ~~~~A~~~----g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~--------------------------~~~~- 123 (212)
T 3rjv_A 75 LAEKAVEA----GSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDS--------------------------ESDA- 123 (212)
T ss_dssp HHHHHHHT----TCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSST--------------------------TSHH-
T ss_pred HHHHHHHC----CCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcC--------------------------CCcc-
Confidence 99999763 345678888999988 899999999999988410 0000
Q ss_pred CCCCcchhHHHHHHHhh----cCCCCchhHHhhccccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHH
Q psy7457 203 LVPPPEILSKFVITLVH----LRSETQFPTLLASLKFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALI 278 (497)
Q Consensus 203 l~lPiDLr~KLgI~ll~----Lg~~~~~~~l~~~l~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~ 278 (497)
..+-...||.++.. .++.+.+...+..- .+.-++.+-+ +.+|.+|.
T Consensus 124 ---~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A---~~~~~~~~a~------------------------~~Lg~~y~ 173 (212)
T 3rjv_A 124 ---AVDAQMLLGLIYASGVHGPEDDVKASEYFKGS---SSLSRTGYAE------------------------YWAGMMFQ 173 (212)
T ss_dssp ---HHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHH---HHTSCTTHHH------------------------HHHHHHHH
T ss_pred ---hHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHH---HHcCCCHHHH------------------------HHHHHHHH
Confidence 16778889998887 44444554444332 1111221144 88999997
Q ss_pred hc-c-----cHHHHHHHHHHHhcC
Q psy7457 279 QE-H-----YEAYAVQVLVLLVSS 296 (497)
Q Consensus 279 e~-g-----~y~~Al~~l~~L~~~ 296 (497)
.- | .+.+|+.+|......
T Consensus 174 ~g~gg~~~~d~~~A~~~~~~A~~~ 197 (212)
T 3rjv_A 174 QGEKGFIEPNKQKALHWLNVSCLE 197 (212)
T ss_dssp HCBTTTBCCCHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHc
Confidence 64 3 899999999887765
No 172
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=97.61 E-value=0.0016 Score=67.43 Aligned_cols=186 Identities=12% Similarity=0.009 Sum_probs=130.8
Q ss_pred hhHHHhhcCCCCccHHHHHHHHHHHHHhC---CcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhc----CCH
Q psy7457 49 EHILIQRGLSKDTILDNRARRLRLCDEIG---LKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTA----RNF 121 (497)
Q Consensus 49 ~~~~~~~~~~~p~n~~~~~~RA~Ly~elG---~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~----~~~ 121 (497)
+.++..|...+|. ..+..+.+|.+.| +.. +|++.|++.... -|.+. ...-.|+.+|... ++.
T Consensus 165 ~~~~~~a~~~~~~---a~~~Lg~~~~~~g~~~~~~--~A~~~~~~aa~~-g~~~a-----~~~~~Lg~~y~~g~~~~~d~ 233 (452)
T 3e4b_A 165 ERICKAALNTTDI---CYVELATVYQKKQQPEQQA--ELLKQMEAGVSR-GTVTA-----QRVDSVARVLGDATLGTPDE 233 (452)
T ss_dssp HHHHHHHTTTCTT---HHHHHHHHHHHTTCHHHHH--HHHHHHHHHHHT-TCSCH-----HHHHHHHHHHTCGGGSSCCH
T ss_pred HHHHHHHHcCCHH---HHHHHHHHHHHcCCcccHH--HHHHHHHHHHHC-CCHHH-----HHHHHHHHHHhCCCCCCCCH
Confidence 3345555566655 8899999999999 888 999999999999 66663 3446789999766 799
Q ss_pred HHHHHHHHHHHHHccCCCChhHHHHHHHH-H--HhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccC
Q psy7457 122 PQAASSLAIAFQYSAHLIRPEHCNLYLEV-L--LELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVP 198 (497)
Q Consensus 122 ~~Ai~~le~a~~~~~~~f~~~~vNiLaEL-~--i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p 198 (497)
++|+..|+.+. |+ .....+-|+.+ | ...+++++|++++++.+..
T Consensus 234 ~~A~~~~~~aa---~g--~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~---------------------------- 280 (452)
T 3e4b_A 234 KTAQALLEKIA---PG--YPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA---------------------------- 280 (452)
T ss_dssp HHHHHHHHHHG---GG--STHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT----------------------------
T ss_pred HHHHHHHHHHc---CC--CHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC----------------------------
Confidence 99999999998 42 34566677776 4 5689999999999997741
Q ss_pred CCCCCCCCcchhHHHHHHHhhcCC--CCchhHHhhccccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHH
Q psy7457 199 SDPNLVPPPEILSKFVITLVHLRS--ETQFPTLLASLKFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEA 276 (497)
Q Consensus 199 ~~l~l~lPiDLr~KLgI~ll~Lg~--~~~~~~l~~~l~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeA 276 (497)
+ ..+-...||.++. .|. ....+.-+..+.... -++.+-. +.+|..
T Consensus 281 g------~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa--~g~~~A~------------------------~~Lg~~ 327 (452)
T 3e4b_A 281 D------QPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV--GREVAAD------------------------YYLGQI 327 (452)
T ss_dssp T------CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT--TTCHHHH------------------------HHHHHH
T ss_pred C------CHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh--CCCHHHH------------------------HHHHHH
Confidence 1 2456678888776 441 111222222222222 3332255 888988
Q ss_pred HHh----cccHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHH
Q psy7457 277 LIQ----EHYEAYAVQVLVLLVSSEKYNQPGVWKQLAETYEK 314 (497)
Q Consensus 277 l~e----~g~y~~Al~~l~~L~~~~~y~~~~vwl~lAeCy~~ 314 (497)
|.. ...+.+|+.+|....... .+.-...+|.||..
T Consensus 328 y~~G~g~~~d~~~A~~~~~~Aa~~g---~~~A~~~Lg~~y~~ 366 (452)
T 3e4b_A 328 YRRGYLGKVYPQKALDHLLTAARNG---QNSADFAIAQLFSQ 366 (452)
T ss_dssp HHTTTTSSCCHHHHHHHHHHHHTTT---CTTHHHHHHHHHHS
T ss_pred HHCCCCCCcCHHHHHHHHHHHHhhC---hHHHHHHHHHHHHh
Confidence 887 449999999999887643 23447889999976
No 173
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=97.61 E-value=3e-05 Score=81.50 Aligned_cols=128 Identities=8% Similarity=0.033 Sum_probs=101.5
Q ss_pred cHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCCh
Q psy7457 62 ILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRP 141 (497)
Q Consensus 62 n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~ 141 (497)
+.+.+..++..|.+.|++. +|++.|++.++. .|.+. .+...+|..|.++|++++|++.|+++++..|.. .
T Consensus 5 ~a~~~~~lg~~~~~~g~~~--~A~~~~~~Al~~-~p~~~-----~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~--~ 74 (477)
T 1wao_1 5 RAEELKTQANDYFKAKDYE--NAIKFYSQAIEL-NPSNA-----IYYGNRSLAYLRTECYGYALGDATRAIELDKKY--I 74 (477)
T ss_dssp HHTTSSSSSSSTTTTTCHH--HHHHHHHHHHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTC--H
T ss_pred HHHHHHHHHHHHHHhCCHH--HHHHHHHHHHHh-CCccH-----HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC--H
Confidence 3445556677788899999 999999999999 89874 688899999999999999999999999998864 5
Q ss_pred hHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHH--Hhh
Q psy7457 142 EHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVIT--LVH 219 (497)
Q Consensus 142 ~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~--ll~ 219 (497)
.-.+.++.+|..+|+|++|++.+++..... |++ .+....++.+ ++.
T Consensus 75 ~~~~~lg~~~~~~g~~~eA~~~~~~al~~~--------------------------p~~------~~~~~~l~~~~~~~~ 122 (477)
T 1wao_1 75 KGYYRRAASNMALGKFRAALRDYETVVKVK--------------------------PHD------KDAKMKYQECNKIVK 122 (477)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHS--------------------------TTC------TTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------------------------CCC------HHHHHHHHHHHHHHH
Confidence 667889999999999999999998866421 333 2466777777 777
Q ss_pred cCCCCchhHHhh
Q psy7457 220 LRSETQFPTLLA 231 (497)
Q Consensus 220 Lg~~~~~~~l~~ 231 (497)
.|+.+++..++.
T Consensus 123 ~g~~~~A~~~~~ 134 (477)
T 1wao_1 123 QKAFERAIAGDE 134 (477)
T ss_dssp HHHHCCC-----
T ss_pred HHHHHHHhcccc
Confidence 787777666654
No 174
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=97.53 E-value=0.00037 Score=72.24 Aligned_cols=99 Identities=7% Similarity=-0.049 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChh
Q psy7457 63 LDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPE 142 (497)
Q Consensus 63 ~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~ 142 (497)
.+..+.-+.+|...+... ++.+.++.+.+. .+.... ...-.|+.+|...+.++++++..+..+..... .+..
T Consensus 106 ~~A~~~Lg~~y~~~~~~~--~~~~a~~~~~~a-~~~g~~----~a~~~Lg~~y~~~~~~~~~~~~a~~~~~~a~~-~~~~ 177 (452)
T 3e4b_A 106 GNTLIPLAMLYLQYPHSF--PNVNAQQQISQW-QAAGYP----EAGLAQVLLYRTQGTYDQHLDDVERICKAALN-TTDI 177 (452)
T ss_dssp SSCHHHHHHHHHHCGGGC--TTCCHHHHHHHH-HHHTCT----THHHHHHHHHHHHTCGGGGHHHHHHHHHHHTT-TCTT
T ss_pred HHHHHHHHHHHHhCCCCC--CCHHHHHHHHHH-HHCCCH----HHHHHHHHHHHcCCCcccCHHHHHHHHHHHHc-CCHH
Confidence 447777788888777655 555555555444 322221 36667888888888777777765555544322 2334
Q ss_pred HHHHHHHHHHhhc---cHHHHHHHHHHhch
Q psy7457 143 HCNLYLEVLLELK---RYETCVEVLRRFAN 169 (497)
Q Consensus 143 ~vNiLaEL~i~~k---~y~~al~~I~~~~~ 169 (497)
-.+.|+.+|...+ ++++|++++++.+.
T Consensus 178 a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~ 207 (452)
T 3e4b_A 178 CYVELATVYQKKQQPEQQAELLKQMEAGVS 207 (452)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCcccHHHHHHHHHHHHH
Confidence 7788888999998 99999999988774
No 175
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=97.53 E-value=0.00031 Score=67.40 Aligned_cols=102 Identities=12% Similarity=0.076 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHHhCCcchhHHHHHHHHHH---hccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCC-
Q psy7457 63 LDNRARRLRLCDEIGLKNRGFVLAGYQRYL---KNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHL- 138 (497)
Q Consensus 63 ~~~~~~RA~Ly~elG~~~~~~Al~~y~~il---~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~- 138 (497)
...+...+.+|.+.|++. +|++.|++.+ +. .|.+. .....+.-.+|.+|...|++++|+..++++++..+..
T Consensus 155 ~~~~~~lg~~y~~~~~~~--~A~~~~~kal~~~~~-~~~~~-~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~ 230 (293)
T 2qfc_A 155 LYIENAIANIYAENGYLK--KGIDLFEQILKQLEA-LHDNE-EFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRIN 230 (293)
T ss_dssp HHHHHHHHHHHHHTTCHH--HHHHHHHHHHHHHHH-SCCCH-HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCHH--HHHHHHHHHHHHHHh-cCccc-cchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcC
Confidence 568889999999999999 9999999999 55 66442 3233688999999999999999999999999876432
Q ss_pred --CC-hhHHHHHHHHHHhhccHHHH-HHHHHHhc
Q psy7457 139 --IR-PEHCNLYLEVLLELKRYETC-VEVLRRFA 168 (497)
Q Consensus 139 --f~-~~~vNiLaEL~i~~k~y~~a-l~~I~~~~ 168 (497)
+. -.-.+.++..|..+|+|++| ...+++..
T Consensus 231 ~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al 264 (293)
T 2qfc_A 231 SMALIGQLYYQRGECLRKLEYEEAEIEDAYKKAS 264 (293)
T ss_dssp BCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 22 23467789999999999999 56566644
No 176
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=97.51 E-value=0.00073 Score=55.27 Aligned_cols=79 Identities=11% Similarity=0.058 Sum_probs=70.7
Q ss_pred HHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhhccHHHHHH
Q psy7457 83 FVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVE 162 (497)
Q Consensus 83 ~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~ 162 (497)
.|++.|++.++. .|.+. .+.-.+|.+|...|++++|+..|++++...|+. ..-...++.+|...|++.+|+.
T Consensus 3 ~a~~~~~~al~~-~p~~~-----~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~--~~~~~~la~~~~~~g~~~~A~~ 74 (115)
T 2kat_A 3 AITERLEAMLAQ-GTDNM-----LLRFTLGKTYAEHEQFDAALPHLRAALDFDPTY--SVAWKWLGKTLQGQGDRAGARQ 74 (115)
T ss_dssp CHHHHHHHHHTT-TCCCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--HHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHh-CCCcH-----HHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCc--HHHHHHHHHHHHHcCCHHHHHH
Confidence 689999999999 88774 678899999999999999999999999999865 4567889999999999999999
Q ss_pred HHHHhch
Q psy7457 163 VLRRFAN 169 (497)
Q Consensus 163 ~I~~~~~ 169 (497)
.+++...
T Consensus 75 ~~~~al~ 81 (115)
T 2kat_A 75 AWESGLA 81 (115)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9988654
No 177
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=97.40 E-value=0.0009 Score=52.92 Aligned_cols=66 Identities=12% Similarity=0.182 Sum_probs=60.4
Q ss_pred HHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHH-HHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCC
Q psy7457 66 RARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILD-LSTRAAHVYHTARNFPQAASSLAIAFQYSAHLI 139 (497)
Q Consensus 66 ~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~-~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f 139 (497)
.+.++..+.+.|++. +|++.|+++++. .|.+. . +...+|.+|...|+.++|+..|++++...|+..
T Consensus 3 ~~~~a~~~~~~~~~~--~A~~~~~~al~~-~p~~~-----~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 69 (99)
T 2kc7_A 3 QLKTIKELINQGDIE--NALQALEEFLQT-EPVGK-----DEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSP 69 (99)
T ss_dssp THHHHHHHHHHTCHH--HHHHHHHHHHHH-CSSTH-----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTST
T ss_pred HHHHHHHHHHcCCHH--HHHHHHHHHHHH-CCCcH-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcH
Confidence 467899999999999 999999999999 88874 5 778999999999999999999999999999763
No 178
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=97.30 E-value=0.00023 Score=71.05 Aligned_cols=128 Identities=8% Similarity=-0.059 Sum_probs=75.9
Q ss_pred ccccCCccceehhhcccCcchhhhHHHhhcC----CCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChh
Q psy7457 27 IQVINPDESRYILSRVRTPKKIEHILIQRGL----SKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQ 102 (497)
Q Consensus 27 ~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~----~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~ 102 (497)
....+.++|+-+|.+++............+. ...-....+..++.+|.++|++. +|++.|+++++. .|.+.
T Consensus 190 ~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~--~A~~~~~~al~~-~p~~~-- 264 (338)
T 2if4_A 190 FKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYD--EAIGHCNIVLTE-EEKNP-- 264 (338)
T ss_dssp CSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCH--HHHHHHHHHHHH-CTTCH--
T ss_pred HhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHh-CCCCH--
Confidence 3467889999999998875322211000000 00000148899999999999999 999999999999 88774
Q ss_pred hHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHH-hhccHHHHHHHH
Q psy7457 103 TILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLL-ELKRYETCVEVL 164 (497)
Q Consensus 103 ~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i-~~k~y~~al~~I 164 (497)
.+.-.+|..|...|++++|+..|++++...|+. ..-.+.|..+.. ..+.++++.+..
T Consensus 265 ---~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~--~~a~~~L~~l~~~~~~~~~~a~~~~ 322 (338)
T 2if4_A 265 ---KALFRRGKAKAELGQMDSARDDFRKAQKYAPDD--KAIRRELRALAEQEKALYQKQKEMY 322 (338)
T ss_dssp ---HHHHHHHHHHHTTTCHHHHHHHHHHTTC--------------------------------
T ss_pred ---HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCC--HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 688899999999999999999999999988864 233344444422 233444444433
No 179
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=97.28 E-value=0.00079 Score=68.46 Aligned_cols=102 Identities=11% Similarity=0.035 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCC-----------ChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q psy7457 63 LDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDS-----------DPQTILDLSTRAAHVYHTARNFPQAASSLAIA 131 (497)
Q Consensus 63 ~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d-----------~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a 131 (497)
...+..++..|.+.|++. +|++.|++.++. .|.. .......+...+|.+|..+|++++|++.++++
T Consensus 223 a~~~~~~g~~~~~~g~~~--~Ai~~y~kAl~~-~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~a 299 (370)
T 1ihg_A 223 SEDLKNIGNTFFKSQNWE--MAIKKYTKVLRY-VEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEA 299 (370)
T ss_dssp HHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-HHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHH--HHHHHHHHHHHH-hhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 345778899999999999 999999999995 4431 11223478889999999999999999999999
Q ss_pred HHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 132 FQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 132 ~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
++..|+. ..-+..++.+|..+++|++|++.+++...
T Consensus 300 l~~~p~~--~~a~~~lg~~~~~~g~~~eA~~~l~~Al~ 335 (370)
T 1ihg_A 300 LEIDPSN--TKALYRRAQGWQGLKEYDQALADLKKAQE 335 (370)
T ss_dssp HTTCTTC--HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHhCchh--HHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 9998864 45678899999999999999999988764
No 180
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=97.27 E-value=0.00047 Score=63.59 Aligned_cols=130 Identities=13% Similarity=-0.032 Sum_probs=106.3
Q ss_pred CChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhC----CcchhHH
Q psy7457 9 ENPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIG----LKNRGFV 84 (497)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG----~~~~~~A 84 (497)
.||+.++.++.+...+ .++++|+.+|.++... .+.+..+.-+.+|.+ | ++. +|
T Consensus 16 g~~~a~~~lg~~~~~~-----~~~~~A~~~~~~a~~~---------------g~~~a~~~lg~~y~~-~g~~~~~~--~A 72 (212)
T 3rjv_A 16 GDRRAQYYLADTWVSS-----GDYQKAEYWAQKAAAQ---------------GDGDALALLAQLKIR-NPQQADYP--QA 72 (212)
T ss_dssp TCHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHT---------------TCHHHHHHHHHHTTS-STTSCCHH--HH
T ss_pred CCHHHHHHHHHHHhcC-----CCHHHHHHHHHHHHHc---------------CCHHHHHHHHHHHHc-CCCCCCHH--HH
Confidence 5889999998887763 5788888888887653 457889999999998 7 888 99
Q ss_pred HHHHHHHHhccCCCCChhhHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHh----hcc
Q psy7457 85 LAGYQRYLKNITPDSDPQTILDLSTRAAHVYHT----ARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLE----LKR 156 (497)
Q Consensus 85 l~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e----~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~----~k~ 156 (497)
++-|++..+. .+ ....-.|+.+|.. .++.++|+..|+++.+..++.-.....+.|..+|.. .+.
T Consensus 73 ~~~~~~A~~~---g~-----~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d 144 (212)
T 3rjv_A 73 RQLAEKAVEA---GS-----KSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPED 144 (212)
T ss_dssp HHHHHHHHHT---TC-----HHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCC
T ss_pred HHHHHHHHHC---CC-----HHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCC
Confidence 9999999765 23 2577899999998 999999999999998765521125678889999999 889
Q ss_pred HHHHHHHHHHhch
Q psy7457 157 YETCVEVLRRFAN 169 (497)
Q Consensus 157 y~~al~~I~~~~~ 169 (497)
+++|++++++.+.
T Consensus 145 ~~~A~~~~~~A~~ 157 (212)
T 3rjv_A 145 DVKASEYFKGSSS 157 (212)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999875
No 181
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=97.27 E-value=0.00057 Score=68.31 Aligned_cols=193 Identities=11% Similarity=-0.067 Sum_probs=134.4
Q ss_pred HHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHH---HHHHHHHhcCCHHHHHHHHHHHHHHccCCC
Q psy7457 63 LDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLST---RAAHVYHTARNFPQAASSLAIAFQYSAHLI 139 (497)
Q Consensus 63 ~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k---~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f 139 (497)
....++++.=+ +-|+.. .|.++|.++++. -|... +-|+..+. .=..+....++...|+..+.+.+.-.|..+
T Consensus 7 ~~~~~~~~~~~-~~~d~~--~A~~~F~~a~~~-dP~~~-Daw~g~~a~g~~~~~~L~~~~r~~~a~~~~~~~l~l~p~~l 81 (282)
T 4f3v_A 7 LASLFESAVSM-LPMSEA--RSLDLFTEITNY-DESAC-DAWIGRIRCGDTDRVTLFRAWYSRRNFGQLSGSVQISMSTL 81 (282)
T ss_dssp HHHHHHHHHHH-TTTCHH--HHHHHHHHHHHH-CTTCH-HHHHHHHHTTCCCHHHHHHHHHTGGGTTHHHHTTTCCGGGG
T ss_pred HHHHHHHHhcc-cCCCHH--HHHHHHHHHHHh-Chhhh-HHHHhHHHccCCcHHHHHHHHHHHHHHHHHHHHhcCChhhh
Confidence 45678888887 588999 999999999999 88764 43333300 003344444446778888888888666543
Q ss_pred C------------------hhHHH-HHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCC
Q psy7457 140 R------------------PEHCN-LYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSD 200 (497)
Q Consensus 140 ~------------------~~~vN-iLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~ 200 (497)
. ..++. .|+-+++..|+|.+|.+.+...... -|+
T Consensus 82 ~a~~~~~g~y~~~~~~v~~r~dl~LayA~~L~~~g~y~eA~~~l~~~~~~--------------------------~p~- 134 (282)
T 4f3v_A 82 NARIAIGGLYGDITYPVTSPLAITMGFAACEAAQGNYADAMEALEAAPVA--------------------------GSE- 134 (282)
T ss_dssp CCEEECCTTTCCCEEECSSHHHHHHHHHHHHHHHTCHHHHHHHHTSSCCT--------------------------TCH-
T ss_pred hhhhccCCcccccccccCCHhHHHHHHHHHHHHCCCHHHHHHHHHHHHhc--------------------------CCc-
Confidence 1 12322 3788999999999999999664420 022
Q ss_pred CCCCCCcchhHHHHHHHhhcCCCCchhHHhhcc-cc-CcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHH
Q psy7457 201 PNLVPPPEILSKFVITLVHLRSETQFPTLLASL-KF-DVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALI 278 (497)
Q Consensus 201 l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l-~e-~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~ 278 (497)
.+ .+.-+|+..++.|..+.+...|+.. .. ++..-.+ .+ +-+|.++.
T Consensus 135 -----~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~--a~------------------------~~LG~al~ 182 (282)
T 4f3v_A 135 -----HL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGA--AG------------------------VAHGVAAA 182 (282)
T ss_dssp -----HH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHH--HH------------------------HHHHHHHH
T ss_pred -----hH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHH--HH------------------------HHHHHHHH
Confidence 23 6777788888888888888887544 21 1111123 33 88899999
Q ss_pred hcccHHHHHHHHHHHhcCCC-CC-hHHHHHHHHHHHHHhhhcc
Q psy7457 279 QEHYEAYAVQVLVLLVSSEK-YN-QPGVWKQLAETYEKSECLS 319 (497)
Q Consensus 279 e~g~y~~Al~~l~~L~~~~~-y~-~~~vwl~lAeCy~~l~~l~ 319 (497)
..|++++|+..|......+. .. .+..++..|-|+.+++..+
T Consensus 183 ~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~d 225 (282)
T 4f3v_A 183 NLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNES 225 (282)
T ss_dssp HTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHH
T ss_pred HCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHH
Confidence 99999999999999886653 33 5667999999999977554
No 182
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.26 E-value=0.0015 Score=66.12 Aligned_cols=189 Identities=10% Similarity=0.014 Sum_probs=128.7
Q ss_pred HHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCC--ccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCC
Q psy7457 21 VLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKD--TILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPD 98 (497)
Q Consensus 21 ~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p--~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~ 98 (497)
+|++.-....++++|+=++.++|. ++| .+.+.+.-.+.+|-.+|+.. .|.+.++++.+. -|.
T Consensus 105 ~la~i~~~~g~~eeAL~~l~~~i~-------------~~~~~~~lea~~l~vqi~L~~~r~d--~A~k~l~~~~~~-~~d 168 (310)
T 3mv2_B 105 LLATAQAILGDLDKSLETCVEGID-------------NDEAEGTTELLLLAIEVALLNNNVS--TASTIFDNYTNA-IED 168 (310)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHT-------------SSCSTTHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-SCH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHhc-------------cCCCcCcHHHHHHHHHHHHHCCCHH--HHHHHHHHHHhc-Ccc
Confidence 333333334566666666666655 354 88999999999999999999 999999999888 552
Q ss_pred ----CChhhHHHHHHHHHHHHHh--cC--CHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhchh
Q psy7457 99 ----SDPQTILDLSTRAAHVYHT--AR--NFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFANI 170 (497)
Q Consensus 99 ----d~~~~~~~~~k~LA~~Y~e--~~--~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~~ 170 (497)
++ .++-.||..++. .| +..+|..+|+++.+.+|+ |...++|...++.+|+|.+|-+.++..-..
T Consensus 169 ~~~~~d-----~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~---~~~~~lLln~~~~~g~~~eAe~~L~~l~~~ 240 (310)
T 3mv2_B 169 TVSGDN-----EMILNLAESYIKFATNKETATSNFYYYEELSQTFPT---WKTQLGLLNLHLQQRNIAEAQGIVELLLSD 240 (310)
T ss_dssp HHHHHH-----HHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCS---HHHHHHHHHHHHHHTCHHHHHHHHHHHHSH
T ss_pred ccccch-----HHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCC---cccHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 22 477788877443 35 899999999999888885 788777777999999999999999753321
Q ss_pred e--eeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhcc-ccCcccccccchhh
Q psy7457 171 E--ITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLASL-KFDVEMYGTITVYL 247 (497)
Q Consensus 171 ~--l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly~ 247 (497)
- ++.+. .--|++ .+..+=+++|-.++|. ++..+++.+ ..+|+.-.-
T Consensus 241 ~p~~~~k~------------------~~~p~~------~~~LaN~i~l~~~lgk--~a~~l~~qL~~~~P~hp~i----- 289 (310)
T 3mv2_B 241 YYSVEQKE------------------NAVLYK------PTFLANQITLALMQGL--DTEDLTNQLVKLDHEHAFI----- 289 (310)
T ss_dssp HHHTTTCH------------------HHHSSH------HHHHHHHHHHHHHTTC--TTHHHHHHHHHTTCCCHHH-----
T ss_pred cccccccc------------------cCCCCC------HHHHHHHHHHHHHhCh--HHHHHHHHHHHhCCCChHH-----
Confidence 0 00000 001343 3666777788888997 667888877 555532211
Q ss_pred hhHHHHHHHHHHHHHHHh
Q psy7457 248 DIAEALIQEHYEAYAVQF 265 (497)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~ 265 (497)
.--.+.+..|+..+.+|
T Consensus 290 -~d~~~k~~~Fd~~~~ky 306 (310)
T 3mv2_B 290 -KHHQEIDAKFDELVRKY 306 (310)
T ss_dssp -HHHHHHHHHHHHHHHTC
T ss_pred -HHHHHHHHHHHHHHHHh
Confidence 01123344466666665
No 183
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.22 E-value=0.0002 Score=76.01 Aligned_cols=178 Identities=13% Similarity=0.123 Sum_probs=47.2
Q ss_pred HHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHH
Q psy7457 71 RLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEV 150 (497)
Q Consensus 71 ~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL 150 (497)
.|...+|... +|.+-++++ |++ ++-..||+.|.+.|+++.||++|.++ ++.-++.. ...-
T Consensus 11 ~ll~~~~~ld--~A~~fae~~-----~~~------~vWs~La~A~l~~g~~~eAIdsfika----~D~~~y~~---V~~~ 70 (449)
T 1b89_A 11 VLIEHIGNLD--RAYEFAERC-----NEP------AVWSQLAKAQLQKGMVKEAIDSYIKA----DDPSSYME---VVQA 70 (449)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHccCHH--HHHHHHHhC-----CCh------HHHHHHHHHHHHcCCHHHHHHHHHcC----CCHHHHHH---HHHH
Confidence 3667889899 999998887 222 25569999999999999999999764 32223332 2334
Q ss_pred HHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHh
Q psy7457 151 LLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLL 230 (497)
Q Consensus 151 ~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~ 230 (497)
+...|+|++|++.++. ++... | +..+-..|+.|+-++|+.+.++.++
T Consensus 71 ae~~g~~EeAi~yl~~-ark~~-------------------------~-------~~~i~~~Li~~Y~Klg~l~e~e~f~ 117 (449)
T 1b89_A 71 ANTSGNWEELVKYLQM-ARKKA-------------------------R-------ESYVETELIFALAKTNRLAELEEFI 117 (449)
T ss_dssp -----------------------------------------------------------------------CHHHHTTTT
T ss_pred HHhCCCHHHHHHHHHH-HHHhC-------------------------c-------cchhHHHHHHHHHHhCCHHHHHHHH
Confidence 5558899999886543 32110 0 2234455677777788777766665
Q ss_pred hcc-ccCcccccccchhhhhHHHHHHHH-HHHHHHHhh-hhhhHHHHHHHHhcccHHHHHHHHHHHhcCCCCChHHHHHH
Q psy7457 231 ASL-KFDVEMYGTITVYLDIAEALIQEH-YEAYAVQFK-ELVYLDIAEALIQEHYEAYAVQVLVLLVSSEKYNQPGVWKQ 307 (497)
Q Consensus 231 ~~l-~e~~ee~~D~~Ly~~~~~~~~~~~-~~~~~~~~~-~~~~ldvaeAl~e~g~y~~Al~~l~~L~~~~~y~~~~vwl~ 307 (497)
..- ......+|| .+ -.+. |+++..+|. -.-+.-+|+||...|+|++|++.|... +++.+|..
T Consensus 118 ~~pn~~a~~~IGd--~~-------~~~g~yeeA~~~Y~~a~n~~~LA~~L~~Lg~yq~AVea~~KA------~~~~~Wk~ 182 (449)
T 1b89_A 118 NGPNNAHIQQVGD--RC-------YDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKA------NSTRTWKE 182 (449)
T ss_dssp TCC-------------------------CTTTHHHHHHHTTCHHHHHHHHHTTTCHHHHHHHHHHH------TCHHHHHH
T ss_pred cCCcHHHHHHHHH--HH-------HHcCCHHHHHHHHHHhhhHHHHHHHHHHhccHHHHHHHHHHc------CCchhHHH
Confidence 322 122334555 44 1222 777777776 347788899999999999999999877 46777888
Q ss_pred HHHHHHHhh
Q psy7457 308 LAETYEKSE 316 (497)
Q Consensus 308 lAeCy~~l~ 316 (497)
...++..++
T Consensus 183 v~~aCv~~~ 191 (449)
T 1b89_A 183 VCFACVDGK 191 (449)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 766655543
No 184
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.21 E-value=0.00014 Score=77.22 Aligned_cols=213 Identities=12% Similarity=0.063 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHH
Q psy7457 65 NRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHC 144 (497)
Q Consensus 65 ~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~v 144 (497)
.+...+..+-+.|+++ .|++.|.+. | |. .....+...+...|++++|+..|+.+.+.-++. .--
T Consensus 34 vWs~La~A~l~~g~~~--eAIdsfika-----~-D~-----~~y~~V~~~ae~~g~~EeAi~yl~~ark~~~~~---~i~ 97 (449)
T 1b89_A 34 VWSQLAKAQLQKGMVK--EAIDSYIKA-----D-DP-----SSYMEVVQAANTSGNWEELVKYLQMARKKARES---YVE 97 (449)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHcCCHH--HHHHHHHcC-----C-CH-----HHHHHHHHHHHhCCCHHHHHHHHHHHHHhCccc---hhH
Confidence 4445566666666666 666666441 1 11 122333344555666666666666666543321 112
Q ss_pred HHHHHHHHhhccHHHHHHHHHHhchh-eeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCC
Q psy7457 145 NLYLEVLLELKRYETCVEVLRRFANI-EITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSE 223 (497)
Q Consensus 145 NiLaEL~i~~k~y~~al~~I~~~~~~-~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~ 223 (497)
+-|+.+|.++|++.++.+.++.-... |.+-.+-..+.+..++. ..-+...+ --.||+.|+++||+.
T Consensus 98 ~~Li~~Y~Klg~l~e~e~f~~~pn~~a~~~IGd~~~~~g~yeeA----~~~Y~~a~---------n~~~LA~~L~~Lg~y 164 (449)
T 1b89_A 98 TELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDAA----KLLYNNVS---------NFGRLASTLVHLGEY 164 (449)
T ss_dssp -----------CHHHHTTTTTCC----------------CTTTH----HHHHHHTT---------CHHHHHHHHHTTTCH
T ss_pred HHHHHHHHHhCCHHHHHHHHcCCcHHHHHHHHHHHHHcCCHHHH----HHHHHHhh---------hHHHHHHHHHHhccH
Confidence 23555666666666666555431100 00000000000000000 00011112 237899999999998
Q ss_pred CchhHHhhccccCcccccccchhhhhHHHHHHHH-HHHHHHHhhhh-----hhHHHHHHHHhcccHHHHHHHHHHHhcCC
Q psy7457 224 TQFPTLLASLKFDVEMYGTITVYLDIAEALIQEH-YEAYAVQFKEL-----VYLDIAEALIQEHYEAYAVQVLVLLVSSE 297 (497)
Q Consensus 224 ~~~~~l~~~l~e~~ee~~D~~Ly~~~~~~~~~~~-~~~~~~~~~~~-----~~ldvaeAl~e~g~y~~Al~~l~~L~~~~ 297 (497)
+.+...+.... ++ +.+-.+..+-++.. |+++-...+.. -..++.+.|...|.+++|+.+|+.-+..+
T Consensus 165 q~AVea~~KA~-~~------~~Wk~v~~aCv~~~ef~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le 237 (449)
T 1b89_A 165 QAAVDGARKAN-ST------RTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLE 237 (449)
T ss_dssp HHHHHHHHHHT-CH------HHHHHHHHHHHHTTCHHHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTST
T ss_pred HHHHHHHHHcC-Cc------hhHHHHHHHHHHcCcHHHHHHHHHHHHhCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCc
Confidence 87665543221 22 12211111222221 44443333311 12467889999999999999999999988
Q ss_pred CCChHHHHHHHHHHHHH
Q psy7457 298 KYNQPGVWKQLAETYEK 314 (497)
Q Consensus 298 ~y~~~~vwl~lAeCy~~ 314 (497)
-.-..+|.-+|-+|.+
T Consensus 238 -~ah~~~ftel~il~~k 253 (449)
T 1b89_A 238 -RAHMGMFTELAILYSK 253 (449)
T ss_dssp -TCCHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHHHHHHh
Confidence 4456679999999877
No 185
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=97.17 E-value=0.00075 Score=67.29 Aligned_cols=106 Identities=10% Similarity=-0.005 Sum_probs=89.2
Q ss_pred CCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCCh-----h-------hHHHHHHHHHHHHHhcCCHHHHHH
Q psy7457 59 KDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDP-----Q-------TILDLSTRAAHVYHTARNFPQAAS 126 (497)
Q Consensus 59 ~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~-----~-------~~~~~~k~LA~~Y~e~~~~~~Ai~ 126 (497)
+++....+..++..+.+.|++. +|+..|++.++. .|.+.. . ....+...+|.+|...|++++|+.
T Consensus 175 ~~~~a~~~~~~g~~~~~~g~~~--~A~~~y~~Al~~-~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~ 251 (338)
T 2if4_A 175 RIGAADRRKMDGNSLFKEEKLE--EAMQQYEMAIAY-MGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIG 251 (338)
T ss_dssp HHHHHHHHHHHHHHTCSSSCCH--HHHHHHHHHHHH-SCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCHH--HHHHHHHHHHHH-hccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 3556788889999999999999 999999999999 886530 0 000266789999999999999999
Q ss_pred HHHHHHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 127 SLAIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 127 ~le~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
.+++++...|.. ..-+.-++..|..+++|++|++.+++...
T Consensus 252 ~~~~al~~~p~~--~~a~~~lg~a~~~~g~~~~A~~~l~~al~ 292 (338)
T 2if4_A 252 HCNIVLTEEEKN--PKALFRRGKAKAELGQMDSARDDFRKAQK 292 (338)
T ss_dssp HHHHHHHHCTTC--HHHHHHHHHHHHTTTCHHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCC--HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 999999999854 46678899999999999999999988664
No 186
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=97.17 E-value=0.00028 Score=56.23 Aligned_cols=99 Identities=9% Similarity=-0.067 Sum_probs=78.6
Q ss_pred ChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHH
Q psy7457 10 NPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQ 89 (497)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~ 89 (497)
+++.|+.+++.... ..++++|+=+|.+++.. +|++...+..++.+|.++|++. +|++.|+
T Consensus 3 ~~~~~~~~g~~~~~-----~~~~~~A~~~~~~al~~-------------~p~~~~~~~~lg~~~~~~g~~~--~A~~~~~ 62 (111)
T 2l6j_A 3 QFEKQKEQGNSLFK-----QGLYREAVHCYDQLITA-------------QPQNPVGYSNKAMALIKLGEYT--QAIQMCQ 62 (111)
T ss_dssp HHHHHHHHHHHHHT-----TTCHHHHHHHHHHHHHH-------------CTTCHHHHHHHHHHHHHTTCHH--HHHHHHH
T ss_pred hHHHHHHHHHHHHH-----cCCHHHHHHHHHHHHhc-------------CCCCHHHHHHHHHHHHHhcCHH--HHHHHHH
Confidence 46677777665544 34667777777777764 8889999999999999999999 9999999
Q ss_pred HHHhccCCCC-ChhhHHHHHHHHHHHHHhcCCHHHHHHHHH
Q psy7457 90 RYLKNITPDS-DPQTILDLSTRAAHVYHTARNFPQAASSLA 129 (497)
Q Consensus 90 ~il~~~~P~d-~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le 129 (497)
+.++. .|.+ +......+.-.++..|...|+.+.|+..++
T Consensus 63 ~al~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 102 (111)
T 2l6j_A 63 QGLRY-TSTAEHVAIRSKLQYRLELAQGAVGSVQIPVVEVD 102 (111)
T ss_dssp HHHTS-CSSTTSHHHHHHHHHHHHHHHHHHHCCCCCSSSSS
T ss_pred HHHHh-CCCccHHHHHHHHHHHHHHHHHHHHhHhhhHhHHH
Confidence 99999 8987 333345677888999999988888776544
No 187
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.13 E-value=0.0031 Score=63.85 Aligned_cols=169 Identities=13% Similarity=0.020 Sum_probs=119.0
Q ss_pred HHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhhccHHHHHH
Q psy7457 83 FVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVE 162 (497)
Q Consensus 83 ~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~ 162 (497)
.|+..+++++.. -|.+. ...--+|.+|...|++++|++.+.+.+...|..-+.+-.-+++.+++..|+.+.|.+
T Consensus 84 ~a~~~l~~l~~~-~~~~~-----~~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k 157 (310)
T 3mv2_B 84 KNIEELENLLKD-KQNSP-----YELYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTAST 157 (310)
T ss_dssp TCCHHHHHTTTT-SCCCH-----HHHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cHHHHHHHHHhc-CCCCc-----HHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHH
Confidence 578888888876 33332 233589999999999999999999999888765677888999999999999999999
Q ss_pred HHHHhchheeeeccCCCCCCCCCccccccccccccCC--CCCCCCCcchhHHHHHH--HhhcC--CCCchhHHhhcc-cc
Q psy7457 163 VLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPS--DPNLVPPPEILSKFVIT--LVHLR--SETQFPTLLASL-KF 235 (497)
Q Consensus 163 ~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~--~l~l~lPiDLr~KLgI~--ll~Lg--~~~~~~~l~~~l-~e 235 (497)
.+++....- |+ .- --.+++.|+-+ .+..| ....+-.+|+.+ ..
T Consensus 158 ~l~~~~~~~--------------------------~d~~~~----~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~ 207 (310)
T 3mv2_B 158 IFDNYTNAI--------------------------EDTVSG----DNEMILNLAESYIKFATNKETATSNFYYYEELSQT 207 (310)
T ss_dssp HHHHHHHHS--------------------------CHHHHH----HHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTT
T ss_pred HHHHHHhcC--------------------------cccccc----chHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHh
Confidence 999876421 10 00 02456777666 45556 445555556555 22
Q ss_pred Ccc-cccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHHHHHHHHhcCC---------CCChHHHH
Q psy7457 236 DVE-MYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAVQVLVLLVSSE---------KYNQPGVW 305 (497)
Q Consensus 236 ~~e-e~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al~~l~~L~~~~---------~y~~~~vw 305 (497)
.+. .... +. +- +++..|+|.+|...+..+.... .-+++...
T Consensus 208 ~p~~~~~~--lL------------------------ln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~L 258 (310)
T 3mv2_B 208 FPTWKTQL--GL------------------------LN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFL 258 (310)
T ss_dssp SCSHHHHH--HH------------------------HH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHH
T ss_pred CCCcccHH--HH------------------------HH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHH
Confidence 221 1112 22 22 9999999999999999776641 13467767
Q ss_pred HHHHHHHHHhh
Q psy7457 306 KQLAETYEKSE 316 (497)
Q Consensus 306 l~lAeCy~~l~ 316 (497)
..++.|...++
T Consensus 259 aN~i~l~~~lg 269 (310)
T 3mv2_B 259 ANQITLALMQG 269 (310)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHhC
Confidence 78888888777
No 188
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.12 E-value=0.0022 Score=63.60 Aligned_cols=132 Identities=16% Similarity=0.085 Sum_probs=97.7
Q ss_pred cccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHH
Q psy7457 28 QVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDL 107 (497)
Q Consensus 28 ~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~ 107 (497)
...++++++-++-+++... ......+.-.......+.+|.+.|++. +|++.++++++.....++....+++
T Consensus 107 ~~~~~~~a~~~~~~~~~~~-------~~~~~~~~~~~~~~~la~~~~~~g~~~--~A~~~l~~~~~~~~~~~~~~~~~~~ 177 (434)
T 4b4t_Q 107 VPDSLDDQIFVCEKSIEFA-------KREKRVFLKHSLSIKLATLHYQKKQYK--DSLALINDLLREFKKLDDKPSLVDV 177 (434)
T ss_dssp CCSCHHHHHHHHHHHHHHH-------HHSSCCSSHHHHHHHHHHHHHHHTCHH--HHHHHHHHHHHHHTTSSCSTHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHH-------HHhCccHHHHHHHHHHHHHHHHccChH--HHHHHHHHHHHHHHhcccchhHHHH
Confidence 3445555555555544422 222344444677888999999999999 9999999999873334445567789
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhH-----HHHHHHHHHhhccHHHHHHHHHHhc
Q psy7457 108 STRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEH-----CNLYLEVLLELKRYETCVEVLRRFA 168 (497)
Q Consensus 108 ~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~-----vNiLaEL~i~~k~y~~al~~I~~~~ 168 (497)
.-.++++|...|++++|...|.++....+...+... .+.+..++...+.|++|.+.....-
T Consensus 178 ~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~ 243 (434)
T 4b4t_Q 178 HLLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQTVAELDLMSGILHCEDKDYKTAFSYFFESF 243 (434)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 999999999999999999999999998776655422 3555667778899999998876654
No 189
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=97.09 E-value=0.043 Score=54.88 Aligned_cols=192 Identities=10% Similarity=0.029 Sum_probs=124.7
Q ss_pred HHhhcCCCCccHHHHHHHHHHH----HHh---CCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHH--
Q psy7457 52 LIQRGLSKDTILDNRARRLRLC----DEI---GLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFP-- 122 (497)
Q Consensus 52 ~~~~~~~~p~n~~~~~~RA~Ly----~el---G~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~-- 122 (497)
+.++...+|+++.....|..++ ..+ +... ++++.+.+++.. .|.+-. +--+-.-+....++.+
T Consensus 92 ~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~--~EL~~~~~~l~~-~pkny~-----aW~~R~~vl~~l~~~~~~ 163 (306)
T 3dra_A 92 CEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFDPY--REFDILEAMLSS-DPKNHH-----VWSYRKWLVDTFDLHNDA 163 (306)
T ss_dssp HHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCCTH--HHHHHHHHHHHH-CTTCHH-----HHHHHHHHHHHTTCTTCH
T ss_pred HHHHHHHCcccHHHHHHHHHHHHHHHHhccccCCHH--HHHHHHHHHHHh-CCCCHH-----HHHHHHHHHHHhcccChH
Confidence 3555667999999999999999 777 7888 999999999999 998852 3334444555677777
Q ss_pred HHHHHHHHHHHHccCCC-ChhHHHHHHHHHHhhcc------HHHHHHHHHHhchheeeeccCCCCCCCCCcccccccccc
Q psy7457 123 QAASSLAIAFQYSAHLI-RPEHCNLYLEVLLELKR------YETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNY 195 (497)
Q Consensus 123 ~Ai~~le~a~~~~~~~f-~~~~vNiLaEL~i~~k~------y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~ 195 (497)
++++.++++++.+|..+ .|..--.++ ...++ |+++++.+.+....-
T Consensus 164 ~EL~~~~~~i~~d~~N~sAW~~R~~ll---~~l~~~~~~~~~~eEl~~~~~aI~~~------------------------ 216 (306)
T 3dra_A 164 KELSFVDKVIDTDLKNNSAWSHRFFLL---FSKKHLATDNTIDEELNYVKDKIVKC------------------------ 216 (306)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHH---HSSGGGCCHHHHHHHHHHHHHHHHHC------------------------
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHH---HhccccchhhhHHHHHHHHHHHHHhC------------------------
Confidence 99999999999999875 466544333 23344 888888888766421
Q ss_pred ccCCCCCCCCCcchhHHHHHHHhhcCCCCc-hhHHhhcc-ccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHH
Q psy7457 196 TVPSDPNLVPPPEILSKFVITLVHLRSETQ-FPTLLASL-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDI 273 (497)
Q Consensus 196 ~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~-~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldv 273 (497)
|.+. ..=.-++.++-++|.... +......+ ..+.++... -+ |. .-.
T Consensus 217 --p~n~------SaW~y~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~s--~~---------------al-------~~l 264 (306)
T 3dra_A 217 --PQNP------STWNYLLGIHERFDRSITQLEEFSLQFVDLEKDQVTS--SF---------------AL-------ETL 264 (306)
T ss_dssp --SSCH------HHHHHHHHHHHHTTCCGGGGHHHHHTTEEGGGTEESC--HH---------------HH-------HHH
T ss_pred --CCCc------cHHHHHHHHHHhcCCChHHHHHHHHHHHhccCCCCCC--HH---------------HH-------HHH
Confidence 2221 122234444556665332 33344433 322111222 11 11 456
Q ss_pred HHHHHhcccHHHHHHHHHHHhcCCCCChHHHHHHHHH
Q psy7457 274 AEALIQEHYEAYAVQVLVLLVSSEKYNQPGVWKQLAE 310 (497)
Q Consensus 274 aeAl~e~g~y~~Al~~l~~L~~~~~y~~~~vwl~lAe 310 (497)
|++|.+.|.+++|+++|..|...-.--....|.-.+.
T Consensus 265 a~~~~~~~~~~~A~~~~~~l~~~~Dpir~~yW~~~~~ 301 (306)
T 3dra_A 265 AKIYTQQKKYNESRTVYDLLKSKYNPIRSNFWDYQIS 301 (306)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred HHHHHccCCHHHHHHHHHHHHhccChHHHHHHHHHHh
Confidence 7777789999999999999986323334445664443
No 190
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=97.08 E-value=0.0047 Score=56.78 Aligned_cols=103 Identities=13% Similarity=-0.022 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCC-------ChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH-
Q psy7457 63 LDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDS-------DPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQY- 134 (497)
Q Consensus 63 ~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d-------~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~- 134 (497)
.+....++..+.+.|++. .|++.|.+.++. .|.+ ....-..+--.++..+..+|++++|+..+.++++.
T Consensus 11 a~~~~~~G~~l~~~g~~e--eAi~~Y~kAL~l-~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~ 87 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYD--EAAANCRRAMEI-SHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYF 87 (159)
T ss_dssp HHHHHHHHHHHHHHTCHH--HHHHHHHHHHHH-HTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHH--HHHHHHHHHHhh-CCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhh
Confidence 467789999999999999 999999999999 8883 10001126778999999999999999999999999
Q ss_pred ------ccCCCChhHH----HHHHHHHHhhccHHHHHHHHHHhchh
Q psy7457 135 ------SAHLIRPEHC----NLYLEVLLELKRYETCVEVLRRFANI 170 (497)
Q Consensus 135 ------~~~~f~~~~v----NiLaEL~i~~k~y~~al~~I~~~~~~ 170 (497)
.|+.. .-. +-....+..+|+|++|+...++....
T Consensus 88 n~~~e~~pd~~--~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel 131 (159)
T 2hr2_A 88 NRRGELNQDEG--KLWISAVYSRALALDGLGRGAEAMPEFKKVVEM 131 (159)
T ss_dssp HHHCCTTSTHH--HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hccccCCCchH--HHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 88531 223 67788999999999999999987753
No 191
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.94 E-value=0.0031 Score=52.06 Aligned_cols=75 Identities=11% Similarity=-0.005 Sum_probs=65.8
Q ss_pred CCCccHHHHHHHHHHHHHhCC---cchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q psy7457 58 SKDTILDNRARRLRLCDEIGL---KNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQY 134 (497)
Q Consensus 58 ~~p~n~~~~~~RA~Ly~elG~---~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~ 134 (497)
|+|+|.+.+..++.++--.|. .. +|...+++.++. -|.+. ...-.++..+.+.|++.+||..|+++++.
T Consensus 1 ~~p~~~~~~~~~a~al~~~~~~~~~~--~A~~~l~~AL~~-dp~~~-----rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~ 72 (93)
T 3bee_A 1 SNAVTATQLAAKATTLYYLHKQAMTD--EVSLLLEQALQL-EPYNE-----AALSLIANDHFISFRFQEAIDTWVLLLDS 72 (93)
T ss_dssp -CCCCHHHHHHHHHHHHHTTTTCCCH--HHHHHHHHHHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCCH--HHHHHHHHHHHH-CcCCH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 589999999999999876665 57 999999999999 88885 78889999999999999999999999999
Q ss_pred ccCCCCh
Q psy7457 135 SAHLIRP 141 (497)
Q Consensus 135 ~~~~f~~ 141 (497)
.|+ -.|
T Consensus 73 ~p~-~~~ 78 (93)
T 3bee_A 73 NDP-NLD 78 (93)
T ss_dssp CCT-TCC
T ss_pred CCC-Ccc
Confidence 988 444
No 192
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=96.93 E-value=0.0021 Score=68.55 Aligned_cols=131 Identities=8% Similarity=-0.064 Sum_probs=100.8
Q ss_pred ccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhcc---CCCCChhhHH
Q psy7457 29 VINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNI---TPDSDPQTIL 105 (497)
Q Consensus 29 ~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~---~P~d~~~~~~ 105 (497)
....++|+=.|-|++.+.. ..-+...|.=...+-.-+.+|...|++. +|..-|++.+... ++++-++. .
T Consensus 322 qg~~~eA~~l~~~aL~~~~-----~~lg~~Hp~~a~~~~nLa~~y~~~g~~~--eA~~~~~~aL~i~~~~lG~~Hp~~-a 393 (490)
T 3n71_A 322 EGLYHEVVKLCRECLEKQE-----PVFADTNLYVLRLLSIASEVLSYLQAYE--EASHYARRMVDGYMKLYHHNNAQL-G 393 (490)
T ss_dssp TTCHHHHHHHHHHHHHHHT-----TTBCTTSHHHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHHHHHHSCTTCHHH-H
T ss_pred CCCHHHHHHHHHHHHHHHH-----HhcCCCCHHHHHHHHHHHHHHHHhcCHH--HHHHHHHHHHHHHHHHcCCCCHHH-H
Confidence 4556777777777766421 1123445556778889999999999999 9999999987542 77777554 4
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCC------ChhHHHHHHHHHHhhccHHHHHHHHHHh
Q psy7457 106 DLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLI------RPEHCNLYLEVLLELKRYETCVEVLRRF 167 (497)
Q Consensus 106 ~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f------~~~~vNiLaEL~i~~k~y~~al~~I~~~ 167 (497)
..+..||.+|..+|++++|+.+|++|++-....+ .-+..++|.+.+..+++|++|-...++.
T Consensus 394 ~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~ 461 (490)
T 3n71_A 394 MAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKM 461 (490)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6778999999999999999999999998653222 2345799999999999999998887663
No 193
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=96.88 E-value=0.0017 Score=59.66 Aligned_cols=95 Identities=16% Similarity=0.084 Sum_probs=80.1
Q ss_pred HHHhhcCCCCccHHHHHHHHHHHHHhCCc----------chhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcC-
Q psy7457 51 ILIQRGLSKDTILDNRARRLRLCDEIGLK----------NRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTAR- 119 (497)
Q Consensus 51 ~~~~~~~~~p~n~~~~~~RA~Ly~elG~~----------~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~- 119 (497)
+..+|...+|++.+.+.....++.++|++ . .|+..|++.++. -|... ++.-.++..|.+.|
T Consensus 24 ~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~--eAi~~le~AL~l-dP~~~-----~A~~~LG~ay~~lg~ 95 (158)
T 1zu2_A 24 DAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQ--EAITKFEEALLI-DPKKD-----EAVWCIGNAYTSFAF 95 (158)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHH--HHHHHHHHHHHH-CTTCH-----HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHH--HHHHHHHHHHHh-CcCcH-----HHHHHHHHHHHHhcc
Confidence 34566667999999999999999999875 6 899999999999 99875 67789999999885
Q ss_pred ----------CHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 120 ----------NFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 120 ----------~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
++++|++.|++|++-.|+. ..|.+++++..+...
T Consensus 96 l~P~~~~a~g~~~eA~~~~~kAl~l~P~~----------------~~y~~al~~~~ka~e 139 (158)
T 1zu2_A 96 LTPDETEAKHNFDLATQFFQQAVDEQPDN----------------THYLKSLEMTAKAPQ 139 (158)
T ss_dssp HCCCHHHHHHHHHHHHHHHHHHHHHCTTC----------------HHHHHHHHHHHTHHH
T ss_pred cCcchhhhhccHHHHHHHHHHHHHhCCCC----------------HHHHHHHHHHHhCHh
Confidence 8999999999999999974 367777777766443
No 194
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=96.88 E-value=0.0014 Score=60.38 Aligned_cols=117 Identities=9% Similarity=-0.139 Sum_probs=84.0
Q ss_pred HHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHH
Q psy7457 13 EYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYL 92 (497)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il 92 (497)
.|....|.... ..+.++|+-||.++|..+... .-..+.-.+|.+...+..|+..+.++|++. .|++.|.+.+
T Consensus 13 ~~~~~G~~l~~-----~g~~eeAi~~Y~kAL~l~p~~-~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~--eAl~~~~kAL 84 (159)
T 2hr2_A 13 LALSDAQRQLV-----AGEYDEAAANCRRAMEISHTM-PPEEAFDHAGFDAFCHAGLAEALAGLRSFD--EALHSADKAL 84 (159)
T ss_dssp HHHHHHHHHHH-----HTCHHHHHHHHHHHHHHHTTS-CTTSCCCHHHHHHHHHHHHHHHHHHTTCHH--HHHHHHHHHH
T ss_pred HHHHHHHHHHH-----CCCHHHHHHHHHHHHhhCCCC-cchhhhhhccchHHHHHHHHHHHHHCCCHH--HHHHHHHHHH
Confidence 34444444433 457889999999999874330 000000012223449999999999999999 9999999999
Q ss_pred hc------cCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCC
Q psy7457 93 KN------ITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHL 138 (497)
Q Consensus 93 ~~------~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~ 138 (497)
.. +-|.+ ..-|+...-..+..+..+|++++|+..|+++++-.|+.
T Consensus 85 ~l~n~~~e~~pd~-~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d 135 (159)
T 2hr2_A 85 HYFNRRGELNQDE-GKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEER 135 (159)
T ss_dssp HHHHHHCCTTSTH-HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC
T ss_pred HhhhccccCCCch-HHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 85 14544 34444444899999999999999999999999999864
No 195
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=96.87 E-value=0.0013 Score=50.38 Aligned_cols=84 Identities=12% Similarity=0.072 Sum_probs=66.4
Q ss_pred ChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHH
Q psy7457 10 NPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQ 89 (497)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~ 89 (497)
++..|+.++..... ..++++|+-+|.+++.. +|++...++.++.+|.+.|++. +|++.|+
T Consensus 8 ~~~~~~~la~~~~~-----~~~~~~A~~~~~~a~~~-------------~~~~~~~~~~l~~~~~~~~~~~--~A~~~~~ 67 (91)
T 1na3_A 8 SAEAWYNLGNAYYK-----QGDYDEAIEYYQKALEL-------------DPNNAEAWYNLGNAYYKQGDYD--EAIEYYQ 67 (91)
T ss_dssp HHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHH-------------CTTCHHHHHHHHHHHHHTTCHH--HHHHHHH
T ss_pred cHHHHHHHHHHHHH-----ccCHHHHHHHHHHHHhc-------------CCCCHHHHHHHHHHHHHHhhHH--HHHHHHH
Confidence 45667766665443 34667777777777653 7888999999999999999999 9999999
Q ss_pred HHHhccCCCCChhhHHHHHHHHHHHHHhcC
Q psy7457 90 RYLKNITPDSDPQTILDLSTRAAHVYHTAR 119 (497)
Q Consensus 90 ~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~ 119 (497)
+.++. .|.+. .+...++.+|...|
T Consensus 68 ~a~~~-~p~~~-----~~~~~l~~~~~~~g 91 (91)
T 1na3_A 68 KALEL-DPNNA-----EAKQNLGNAKQKQG 91 (91)
T ss_dssp HHHHH-CTTCH-----HHHHHHHHHHHHHC
T ss_pred HHHhc-CCCCH-----HHHHHHHHHHHhcC
Confidence 99999 88774 67778888887654
No 196
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=96.83 E-value=0.0078 Score=60.31 Aligned_cols=137 Identities=5% Similarity=-0.045 Sum_probs=103.9
Q ss_pred hHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhC--CcchhHHHHHH
Q psy7457 11 PQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIG--LKNRGFVLAGY 88 (497)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG--~~~~~~Al~~y 88 (497)
++.|..+.+.+.+.+...... ++|+-|+.++|.+ +|++.....-|..++..+| .+. .|++.+
T Consensus 29 ~~~y~~~~~~~~a~~~~~e~s-~~aL~~t~~~L~~-------------nP~~~taWn~R~~~L~~l~~~~~~--eeL~~~ 92 (306)
T 3dra_A 29 DEDYKQIMGLLLALMKAEEYS-ERALHITELGINE-------------LASHYTIWIYRFNILKNLPNRNLY--DELDWC 92 (306)
T ss_dssp CHHHHHHHHHHHHHHHTTCCS-HHHHHHHHHHHHH-------------CTTCHHHHHHHHHHHHTCTTSCHH--HHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCC-HHHHHHHHHHHHH-------------CcHHHHHHHHHHHHHHHcccccHH--HHHHHH
Confidence 467888988888877665333 4688888888886 8999999999999999999 999 999999
Q ss_pred HHHHhccCCCCChhhHHHHHHHHH-HHHHhc---CCHHHHHHHHHHHHHHccCCC-ChhHHHHHHHHHHhhccHH--HHH
Q psy7457 89 QRYLKNITPDSDPQTILDLSTRAA-HVYHTA---RNFPQAASSLAIAFQYSAHLI-RPEHCNLYLEVLLELKRYE--TCV 161 (497)
Q Consensus 89 ~~il~~~~P~d~~~~~~~~~k~LA-~~Y~e~---~~~~~Ai~~le~a~~~~~~~f-~~~~vNiLaEL~i~~k~y~--~al 161 (497)
.++++. .|.+..-|.. -+.+- +..... ++.+++++.++.+++.+|..+ -|.+--.+++- .++|+ +++
T Consensus 93 ~~~L~~-nPk~y~aW~~--R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~---l~~~~~~~EL 166 (306)
T 3dra_A 93 EEIALD-NEKNYQIWNY--RQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDT---FDLHNDAKEL 166 (306)
T ss_dssp HHHHHH-CTTCCHHHHH--HHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH---TTCTTCHHHH
T ss_pred HHHHHH-CcccHHHHHH--HHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH---hcccChHHHH
Confidence 999999 9999733221 12222 111334 789999999999999999875 57776655543 45677 888
Q ss_pred HHHHHhch
Q psy7457 162 EVLRRFAN 169 (497)
Q Consensus 162 ~~I~~~~~ 169 (497)
+...+...
T Consensus 167 ~~~~~~i~ 174 (306)
T 3dra_A 167 SFVDKVID 174 (306)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 87766553
No 197
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=96.68 E-value=0.0058 Score=65.15 Aligned_cols=101 Identities=12% Similarity=0.016 Sum_probs=81.8
Q ss_pred HHHHHHHHHHhCCcchhHHHHHHHHHHhcc---CCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCCh-
Q psy7457 66 RARRLRLCDEIGLKNRGFVLAGYQRYLKNI---TPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRP- 141 (497)
Q Consensus 66 ~~~RA~Ly~elG~~~~~~Al~~y~~il~~~---~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~- 141 (497)
..+.+.-++..|++. +|..-|++.|..- +.++- -.....+..||.+|..+|++++|+.+++++++-+...++.
T Consensus 312 ~le~a~~~~~qg~~~--eA~~l~~~aL~~~~~~lg~~H-p~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~ 388 (490)
T 3n71_A 312 TLEKIDKARSEGLYH--EVVKLCRECLEKQEPVFADTN-LYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHN 388 (490)
T ss_dssp HHHHHHHHHTTTCHH--HHHHHHHHHHHHHTTTBCTTS-HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHhCCCHH--HHHHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCC
Confidence 345666788899999 9999999988651 44443 2456788999999999999999999999999976444433
Q ss_pred -----hHHHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 142 -----EHCNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 142 -----~~vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
..+|-|+.+|..+|+|++|+..+++.-.
T Consensus 389 Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~ 421 (490)
T 3n71_A 389 NAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYA 421 (490)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 4488899999999999999999988664
No 198
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=96.62 E-value=0.0085 Score=48.43 Aligned_cols=62 Identities=8% Similarity=-0.044 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 106 DLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 106 ~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
.+.-.+|.+|...|++++|+..|++++...|+. ..-...++.+|..+|+|++|++.+++...
T Consensus 8 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~--~~a~~~lg~~~~~~g~~~~A~~~~~~al~ 69 (100)
T 3ma5_A 8 FTRYALAQEHLKHDNASRALALFEELVETDPDY--VGTYYHLGKLYERLDRTDDAIDTYAQGIE 69 (100)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC--THHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc--HHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 577899999999999999999999999999975 45678899999999999999999988664
No 199
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=96.38 E-value=0.017 Score=60.32 Aligned_cols=102 Identities=13% Similarity=-0.011 Sum_probs=81.4
Q ss_pred HHHHHHHHHHhCCcchhHHHHHHHHHHhc---cCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCC--
Q psy7457 66 RARRLRLCDEIGLKNRGFVLAGYQRYLKN---ITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIR-- 140 (497)
Q Consensus 66 ~~~RA~Ly~elG~~~~~~Al~~y~~il~~---~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~-- 140 (497)
..+...-+...|++. +|++.|++.+.. +++++- -.....+..||.+|..+|++++|+.++++++.-+...++
T Consensus 290 ll~~ie~~~~~g~~~--~a~~~~~~~L~~~~~~lg~~h-~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~ 366 (429)
T 3qwp_A 290 SLKKIEELKAHWKWE--QVLAMCQAIISSNSERLPDIN-IYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGS 366 (429)
T ss_dssp HHHHHHHHHHTTCHH--HHHHHHHHHHTCSSCCCCTTS-HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHHhhccHH--HHHHHHHHHHHhccCcCCccc-hHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCC
Confidence 344455567789999 999999999954 255554 346688999999999999999999999999986633322
Q ss_pred ----hhHHHHHHHHHHhhccHHHHHHHHHHhchh
Q psy7457 141 ----PEHCNLYLEVLLELKRYETCVEVLRRFANI 170 (497)
Q Consensus 141 ----~~~vNiLaEL~i~~k~y~~al~~I~~~~~~ 170 (497)
-..+|-|+-+|..+|+|++|+..+++.-.+
T Consensus 367 Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i 400 (429)
T 3qwp_A 367 HPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDI 400 (429)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 355888999999999999999999887653
No 200
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.36 E-value=0.0076 Score=49.70 Aligned_cols=85 Identities=6% Similarity=-0.127 Sum_probs=63.6
Q ss_pred CChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHH
Q psy7457 9 ENPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGY 88 (497)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y 88 (497)
.||+.|...+..+.-+.+- ...++++-.+-+++. .||++...++-.+.++.+.|+++ +|++.|
T Consensus 4 ~~~~~~~~~a~al~~~~~~--~~~~~A~~~l~~AL~-------------~dp~~~rA~~~lg~~~~~~g~y~--~Ai~~w 66 (93)
T 3bee_A 4 VTATQLAAKATTLYYLHKQ--AMTDEVSLLLEQALQ-------------LEPYNEAALSLIANDHFISFRFQ--EAIDTW 66 (93)
T ss_dssp CCHHHHHHHHHHHHHTTTT--CCCHHHHHHHHHHHH-------------HCTTCHHHHHHHHHHHHHTTCHH--HHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCC--CCCHHHHHHHHHHHH-------------HCcCCHHHHHHHHHHHHHcCCHH--HHHHHH
Confidence 6899999999887543321 224555555555555 59999999999999999999999 999999
Q ss_pred HHHHhccCCCCChhhHHHHHHHHHH
Q psy7457 89 QRYLKNITPDSDPQTILDLSTRAAH 113 (497)
Q Consensus 89 ~~il~~~~P~d~~~~~~~~~k~LA~ 113 (497)
++++.. .|.++ +.-.+.+.+++
T Consensus 67 ~~~l~~-~p~~~--~~~~i~~~I~~ 88 (93)
T 3bee_A 67 VLLLDS-NDPNL--DRVTIIESINK 88 (93)
T ss_dssp HHHHTC-CCTTC--CHHHHHHHHHH
T ss_pred HHHHhh-CCCCc--cHHHHHHHHHH
Confidence 999999 89843 23334444444
No 201
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=96.14 E-value=0.093 Score=58.16 Aligned_cols=202 Identities=10% Similarity=0.056 Sum_probs=135.7
Q ss_pred HHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHH-HHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy7457 52 LIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVL-AGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAI 130 (497)
Q Consensus 52 ~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al-~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~ 130 (497)
..+|....|.+.++.++-|..+...|... .|. +.|++.++. +|.+. .+--..|..+-..|++++|.++|++
T Consensus 332 Ye~aL~~~p~~~~lW~~ya~~~~~~~~~~--~a~r~il~rAi~~-~P~s~-----~Lwl~~a~~ee~~~~~e~aR~iyek 403 (679)
T 4e6h_A 332 YMQAAQHVCFAPEIWFNMANYQGEKNTDS--TVITKYLKLGQQC-IPNSA-----VLAFSLSEQYELNTKIPEIETTILS 403 (679)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHSCCT--THHHHHHHHHHHH-CTTCH-----HHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHhcCcHH--HHHHHHHHHHHHh-CCCCH-----HHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 35555568899999999999999999999 997 999999999 99773 3445788999999999999999999
Q ss_pred HHHHccCCC-------------------Chh-HHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccc
Q psy7457 131 AFQYSAHLI-------------------RPE-HCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNI 190 (497)
Q Consensus 131 a~~~~~~~f-------------------~~~-~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~ 190 (497)
+++..+..+ +.. ---.++.+....+..+.|-+++.+....
T Consensus 404 ~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~-------------------- 463 (679)
T 4e6h_A 404 CIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRL-------------------- 463 (679)
T ss_dssp HHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHT--------------------
T ss_pred HHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------------------
Confidence 998642111 111 1223344444455666666655553220
Q ss_pred cccccccCCCCCCCCCcchhHHHHHHHhhcCC-CCchhHHhhcc-ccCcccccccchhhhhHHHHHHHHHHHHHHHhhhh
Q psy7457 191 QITNYTVPSDPNLVPPPEILSKFVITLVHLRS-ETQFPTLLASL-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKEL 268 (497)
Q Consensus 191 ~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~-~~~~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~ 268 (497)
.|.. +..+-++.+..-.++|. .+.+..+++.. .. ..+.++ ++
T Consensus 464 ------~~~~-----~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~-~p~~~~--~w---------------------- 507 (679)
T 4e6h_A 464 ------KKLV-----TPDIYLENAYIEYHISKDTKTACKVLELGLKY-FATDGE--YI---------------------- 507 (679)
T ss_dssp ------GGGS-----CTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHH-HTTCHH--HH----------------------
T ss_pred ------cCCC-----ChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH-CCCchH--HH----------------------
Confidence 0111 33455566554445554 45556665444 22 223344 55
Q ss_pred hhHHHHHHHHhcccHHHHHHHHHHHhcCCCC--ChHHHHHHHHHHHHHhhhcc
Q psy7457 269 VYLDIAEALIQEHYEAYAVQVLVLLVSSEKY--NQPGVWKQLAETYEKSECLS 319 (497)
Q Consensus 269 ~~ldvaeAl~e~g~y~~Al~~l~~L~~~~~y--~~~~vwl~lAeCy~~l~~l~ 319 (497)
...++-+...|..+.|..+|+..+....- ....+|..+.+--.+.|.++
T Consensus 508 --~~y~~fe~~~~~~~~AR~lferal~~~~~~~~~~~lw~~~~~fE~~~G~~~ 558 (679)
T 4e6h_A 508 --NKYLDFLIYVNEESQVKSLFESSIDKISDSHLLKMIFQKVIFFESKVGSLN 558 (679)
T ss_dssp --HHHHHHHHHHTCHHHHHHHHHHHTTTSSSTTHHHHHHHHHHHHHHHTCCSH
T ss_pred --HHHHHHHHhCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCCHH
Confidence 67777777889999999999998887552 46678988887766655444
No 202
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=96.10 E-value=0.022 Score=59.67 Aligned_cols=94 Identities=11% Similarity=0.011 Sum_probs=74.7
Q ss_pred HHhCCcchhHHHHHHHHHHhc---cCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCC------hhHH
Q psy7457 74 DEIGLKNRGFVLAGYQRYLKN---ITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIR------PEHC 144 (497)
Q Consensus 74 ~elG~~~~~~Al~~y~~il~~---~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~------~~~v 144 (497)
+..|++. +|..-|++.|.. ++.++-+ .....+..||.+|..+|++++|+.++++++.-+-..++ -..+
T Consensus 309 ~~~g~~~--eA~~~~~~~L~i~~~~lg~~Hp-~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l 385 (433)
T 3qww_A 309 KHYKSPS--ELLEICELSQEKMSSVFEDSNV-YMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMW 385 (433)
T ss_dssp TTTSCHH--HHHHHHHHHHHHHTTTBCTTSH-HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHH
T ss_pred hhccCHH--HHHHHHHHHHHHhhCccChhch-HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHH
Confidence 3457788 999999998863 2444443 45578889999999999999999999999986643333 2458
Q ss_pred HHHHHHHHhhccHHHHHHHHHHhchh
Q psy7457 145 NLYLEVLLELKRYETCVEVLRRFANI 170 (497)
Q Consensus 145 NiLaEL~i~~k~y~~al~~I~~~~~~ 170 (497)
|-|+.+|..+|+|++|+..+++.-.+
T Consensus 386 ~nLa~~~~~qg~~~eA~~~~~~Al~i 411 (433)
T 3qww_A 386 LKLGRLYMGLENKAAGEKALKKAIAI 411 (433)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 88999999999999999999886653
No 203
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=96.05 E-value=0.021 Score=47.05 Aligned_cols=73 Identities=3% Similarity=-0.094 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCC--hhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCC
Q psy7457 63 LDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSD--PQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHL 138 (497)
Q Consensus 63 ~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~--~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~ 138 (497)
++..+.-+..+-+.|++. +|+.-|++.++. .+.+. +....++...||..|.++|++++|+..+++++...|+.
T Consensus 5 a~dc~~lG~~~~~~~~y~--~A~~W~~~Al~~-~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~ 79 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYY--HTELWMEQALRQ-LDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEH 79 (104)
T ss_dssp HHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-HHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHccchH--HHHHHHHHHHHh-hhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC
Confidence 456678889999999999 999999999998 64432 34456899999999999999999999999999999976
No 204
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=95.96 E-value=0.091 Score=55.75 Aligned_cols=179 Identities=9% Similarity=0.060 Sum_probs=128.3
Q ss_pred HHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcC---------CHHHHHHHHHHHHHHc--
Q psy7457 67 ARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTAR---------NFPQAASSLAIAFQYS-- 135 (497)
Q Consensus 67 ~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~---------~~~~Ai~~le~a~~~~-- 135 (497)
......|.+.|+.. +|++-|..|.+.=+++|. -++ .-|-..|...+ ++++|.++++.....-
T Consensus 30 ~~~id~c~k~G~~~--~A~~lf~~M~~~Gv~pd~-~ty----n~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~ 102 (501)
T 4g26_A 30 KQKLDMCSKKGDVL--EALRLYDEARRNGVQLSQ-YHY----NVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVV 102 (501)
T ss_dssp HHHHHHTTTSCCHH--HHHHHHHHHHHHTCCCCH-HHH----HHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCHH--HHHHHHHHHHHcCCCCCH-hHH----HHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCC
Confidence 34467889999999 999999999876355553 222 23334555444 3678999998877642
Q ss_pred cCCCChhHHHHHHHHHHhhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhH--HH
Q psy7457 136 AHLIRPEHCNLYLEVLLELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILS--KF 213 (497)
Q Consensus 136 ~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~--KL 213 (497)
|+ -.-.|+|+..|...|++++|+++++..... .+ ++|+.+ -|
T Consensus 103 Pd---~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~-----------------------------g~----~Pd~~tyn~l 146 (501)
T 4g26_A 103 PN---EATFTNGARLAVAKDDPEMAFDMVKQMKAF-----------------------------GI----QPRLRSYGPA 146 (501)
T ss_dssp CC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHT-----------------------------TC----CCCHHHHHHH
T ss_pred CC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHHc-----------------------------CC----CCccceehHH
Confidence 33 345799999999999999999999875431 01 333333 35
Q ss_pred HHHHhhcCCCCchhHHhhcc-ccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHHHHHHH
Q psy7457 214 VITLVHLRSETQFPTLLASL-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAVQVLVL 292 (497)
Q Consensus 214 gI~ll~Lg~~~~~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al~~l~~ 292 (497)
.-++.+.|+.+.+..++..+ .... .+|..-| .-+-.+|...|..++|.++|..
T Consensus 147 I~~~~~~g~~~~A~~l~~~M~~~G~--~Pd~~ty------------------------~~Li~~~~~~g~~d~A~~ll~~ 200 (501)
T 4g26_A 147 LFGFCRKGDADKAYEVDAHMVESEV--VPEEPEL------------------------AALLKVSMDTKNADKVYKTLQR 200 (501)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHTTC--CCCHHHH------------------------HHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHhcCC--CCCHHHH------------------------HHHHHHHhhCCCHHHHHHHHHH
Confidence 56778889999988888777 4433 2452345 8889999999999999999999
Q ss_pred HhcCCCCChHHHHHHHHHHHHH
Q psy7457 293 LVSSEKYNQPGVWKQLAETYEK 314 (497)
Q Consensus 293 L~~~~~y~~~~vwl~lAeCy~~ 314 (497)
+-.....-+...+..+-+.|..
T Consensus 201 Mr~~g~~ps~~T~~~l~~~F~s 222 (501)
T 4g26_A 201 LRDLVRQVSKSTFDMIEEWFKS 222 (501)
T ss_dssp HHHHTSSBCHHHHHHHHHHHHS
T ss_pred HHHhCCCcCHHHHHHHHHHHhc
Confidence 9877666666667667666654
No 205
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=95.79 E-value=0.0064 Score=47.88 Aligned_cols=70 Identities=13% Similarity=-0.011 Sum_probs=53.5
Q ss_pred hhcCCCCccHH-HHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q psy7457 54 QRGLSKDTILD-NRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAF 132 (497)
Q Consensus 54 ~~~~~~p~n~~-~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~ 132 (497)
++...+|++.. .++.++.+|..+|++. +|++.|++.++. .|.+.. +. -.+.+.+|+..|+++.
T Consensus 25 ~al~~~p~~~~~~~~~lg~~~~~~~~~~--~A~~~~~~al~~-~p~~~~-----~~--------~~~~~~~a~~~~~~~~ 88 (99)
T 2kc7_A 25 EFLQTEPVGKDEAYYLMGNAYRKLGDWQ--KALNNYQSAIEL-NPDSPA-----LQ--------ARKMVMDILNFYNKDM 88 (99)
T ss_dssp HHHHHCSSTHHHHHHHHHHHHHHHTCHH--HHHHHHHHHHHH-CTTSTH-----HH--------HHHHHHHHHHHHCCTT
T ss_pred HHHHHCCCcHHHHHHHHHHHHHHcCCHH--HHHHHHHHHHhc-CCCcHH-----HH--------HHHHHHHHHHHHHHHh
Confidence 33335889999 9999999999999999 999999999999 998862 21 0155666777777766
Q ss_pred HHccCCC
Q psy7457 133 QYSAHLI 139 (497)
Q Consensus 133 ~~~~~~f 139 (497)
...|+..
T Consensus 89 ~~~p~~~ 95 (99)
T 2kc7_A 89 YNQLEHH 95 (99)
T ss_dssp HHHHCCS
T ss_pred ccCcccc
Confidence 6666543
No 206
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=95.62 E-value=0.15 Score=56.56 Aligned_cols=211 Identities=8% Similarity=-0.000 Sum_probs=140.9
Q ss_pred CChHHHHHHHHHHHhhhcccccCCccce-ehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHH
Q psy7457 9 ENPQEYYSLLNLVLSQHSIQVINPDESR-YILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAG 87 (497)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~ 87 (497)
.+|..|+..+.....+. +.++|+ =+|.|++. ..|++..++...|.+....|+.. +|.+.
T Consensus 341 ~~~~lW~~ya~~~~~~~-----~~~~a~r~il~rAi~-------------~~P~s~~Lwl~~a~~ee~~~~~e--~aR~i 400 (679)
T 4e6h_A 341 FAPEIWFNMANYQGEKN-----TDSTVITKYLKLGQQ-------------CIPNSAVLAFSLSEQYELNTKIP--EIETT 400 (679)
T ss_dssp TCHHHHHHHHHHHHHHS-----CCTTHHHHHHHHHHH-------------HCTTCHHHHHHHHHHHHHTTCHH--HHHHH
T ss_pred CCHHHHHHHHHHHHhcC-----cHHHHHHHHHHHHHH-------------hCCCCHHHHHHHHHHHHHhCCHH--HHHHH
Confidence 37999999999876543 234554 55666654 47888888999999999999999 99999
Q ss_pred HHHHHhccC-----------CCCCh------hhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHH
Q psy7457 88 YQRYLKNIT-----------PDSDP------QTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEV 150 (497)
Q Consensus 88 y~~il~~~~-----------P~d~~------~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL 150 (497)
|+++++. + |.+.. ..+..+--..|+.-...++++.|..+|++|++..|.. +|.-.--.+.|
T Consensus 401 yek~l~~-l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~-~~~lyi~~A~l 478 (679)
T 4e6h_A 401 ILSCIDR-IHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRLKKLV-TPDIYLENAYI 478 (679)
T ss_dssp HHHHHHH-HHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGS-CTHHHHHHHHH
T ss_pred HHHHHHH-HHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCC-ChHHHHHHHHH
Confidence 9999986 4 43210 0112233344555556788999999999999873322 33322223333
Q ss_pred HHhh-ccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHH
Q psy7457 151 LLEL-KRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTL 229 (497)
Q Consensus 151 ~i~~-k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l 229 (497)
-... +.+++|-++..+.... .|++ .++-..++-..+.+|+.+.+..+
T Consensus 479 E~~~~~d~e~Ar~ife~~Lk~--------------------------~p~~------~~~w~~y~~fe~~~~~~~~AR~l 526 (679)
T 4e6h_A 479 EYHISKDTKTACKVLELGLKY--------------------------FATD------GEYINKYLDFLIYVNEESQVKSL 526 (679)
T ss_dssp HHTTTSCCHHHHHHHHHHHHH--------------------------HTTC------HHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHH--------------------------CCCc------hHHHHHHHHHHHhCCCHHHHHHH
Confidence 3333 3478888887776642 1443 23445667777888988888888
Q ss_pred hhcc-ccC--cccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcccHHHHHHHHHHHhcCCCC
Q psy7457 230 LASL-KFD--VEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEHYEAYAVQVLVLLVSSEKY 299 (497)
Q Consensus 230 ~~~l-~e~--~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g~y~~Al~~l~~L~~~~~y 299 (497)
|+.. ... +++.++ || .--.+--.+.|..+.+..++..+.....-
T Consensus 527 feral~~~~~~~~~~~--lw------------------------~~~~~fE~~~G~~~~~~~v~~R~~~~~P~ 573 (679)
T 4e6h_A 527 FESSIDKISDSHLLKM--IF------------------------QKVIFFESKVGSLNSVRTLEKRFFEKFPE 573 (679)
T ss_dssp HHHHTTTSSSTTHHHH--HH------------------------HHHHHHHHHTCCSHHHHHHHHHHHHHSTT
T ss_pred HHHHHHhcCCHHHHHH--HH------------------------HHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 8765 332 346777 88 44455556678888888888887766554
No 207
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=95.50 E-value=0.028 Score=51.58 Aligned_cols=86 Identities=15% Similarity=0.137 Sum_probs=70.9
Q ss_pred HHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCH----------HHHHHHHHHHHHHccCCCChhH
Q psy7457 74 DEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNF----------PQAASSLAIAFQYSAHLIRPEH 143 (497)
Q Consensus 74 ~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~----------~~Ai~~le~a~~~~~~~f~~~~ 143 (497)
.+++++. .|++.|++.++. .|.+. +....++.++.+.+++ ++||..|++++.-.|.. ..-
T Consensus 13 ~r~~~fe--eA~~~~~~Ai~l-~P~~a-----ea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~--~~A 82 (158)
T 1zu2_A 13 DRILLFE--QIRQDAENTYKS-NPLDA-----DNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKK--DEA 82 (158)
T ss_dssp HHHHHHH--HHHHHHHHHHHH-CTTCH-----HHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTC--HHH
T ss_pred HHHhHHH--HHHHHHHHHHHH-CCCCH-----HHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCc--HHH
Confidence 4677888 999999999999 99885 6777888899988875 59999999999999975 344
Q ss_pred HHHHHHHHHhh-----------ccHHHHHHHHHHhch
Q psy7457 144 CNLYLEVLLEL-----------KRYETCVEVLRRFAN 169 (497)
Q Consensus 144 vNiLaEL~i~~-----------k~y~~al~~I~~~~~ 169 (497)
.+-+.-.|..+ ++|++|++.+++...
T Consensus 83 ~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~ 119 (158)
T 1zu2_A 83 VWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVD 119 (158)
T ss_dssp HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHH
Confidence 55666667665 589999999988664
No 208
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=95.36 E-value=0.14 Score=47.05 Aligned_cols=106 Identities=9% Similarity=0.096 Sum_probs=86.3
Q ss_pred CCCccHHHHHHHHHHHHHhCCc------chhHHHHHHHHHHhccCCCCC---hhhHHHHHHHHHHHHHhcCCHHHHHHHH
Q psy7457 58 SKDTILDNRARRLRLCDEIGLK------NRGFVLAGYQRYLKNITPDSD---PQTILDLSTRAAHVYHTARNFPQAASSL 128 (497)
Q Consensus 58 ~~p~n~~~~~~RA~Ly~elG~~------~~~~Al~~y~~il~~~~P~d~---~~~~~~~~k~LA~~Y~e~~~~~~Ai~~l 128 (497)
-+|+|++..|.-+.+.++.|+. . +-++.|++.... +|++. +...+-+.-.-|. |-+.+|+++|.++|
T Consensus 8 ~~p~~yd~W~~yl~llE~~g~p~~d~~l~--rlrd~YerAia~-~Pp~k~~~wrrYI~LWIrYA~-~~ei~D~d~aR~vy 83 (161)
T 4h7y_A 8 MMANNPEDWLSLLLKLEKNSVPLSDALLN--KLIGRYSQAIEA-LPPDKYGQNESFARIQVRFAE-LKAIQEPDDARDYF 83 (161)
T ss_dssp --CCSHHHHHHHHHHHHHHTCSCCHHHHH--HHHHHHHHHHHH-SCGGGGTTCHHHHHHHHHHHH-HHHHHCGGGCHHHH
T ss_pred eCCCCHHHHHHHHHHHHHcCCCchhhHHH--HHHHHHHHHHHc-CCccccccHHHHHHHHHHHHH-HHHhcCHHHHHHHH
Confidence 4789999999999999999999 8 889999999999 89875 2333444445553 36889999999999
Q ss_pred HHHHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 129 AIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 129 e~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
..++..|.. | ---.-++|+.=+.+|...+|.+++.+.-+
T Consensus 84 ~~a~~~hKk-F-AKiwi~~AqFEiRqgnl~kARkILg~AiG 122 (161)
T 4h7y_A 84 QMARANCKK-F-AFVHISFAQFELSQGNVKKSKQLLQKAVE 122 (161)
T ss_dssp HHHHHHCTT-B-HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhHH-H-HHHHHHHHHHHHHcccHHHHHHHHHHHhc
Confidence 999998554 5 44567889999999999999999988765
No 209
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=95.30 E-value=0.13 Score=44.34 Aligned_cols=87 Identities=9% Similarity=0.030 Sum_probs=75.3
Q ss_pred HHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHccCCCChhHH
Q psy7457 69 RLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHT----ARNFPQAASSLAIAFQYSAHLIRPEHC 144 (497)
Q Consensus 69 RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e----~~~~~~Ai~~le~a~~~~~~~f~~~~v 144 (497)
-+.+|..-+... +|++-|++.... .. ....-.|+.+|.. .++.++|+..|+++.+. ......
T Consensus 31 lg~~y~~g~~~~--~A~~~~~~Aa~~----g~----~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~----g~~~a~ 96 (138)
T 1klx_A 31 LSLVSNSQINKQ--KLFQYLSKACEL----NS----GNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL----NDQDGC 96 (138)
T ss_dssp HHHHTCTTSCHH--HHHHHHHHHHHT----TC----HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT----TCHHHH
T ss_pred HHHHHHcCCCHH--HHHHHHHHHHcC----CC----HHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC----CCHHHH
Confidence 788888888888 899999999988 22 2577899999999 99999999999999875 345678
Q ss_pred HHHHHHHHh----hccHHHHHHHHHHhch
Q psy7457 145 NLYLEVLLE----LKRYETCVEVLRRFAN 169 (497)
Q Consensus 145 NiLaEL~i~----~k~y~~al~~I~~~~~ 169 (497)
..|..+|.. .+.+++|++++++.+.
T Consensus 97 ~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~ 125 (138)
T 1klx_A 97 LILGYKQYAGKGVVKNEKQAVKTFEKACR 125 (138)
T ss_dssp HHHHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCHHHHHHHHHHHHH
Confidence 889999999 8999999999999885
No 210
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=95.29 E-value=0.052 Score=56.63 Aligned_cols=103 Identities=16% Similarity=0.081 Sum_probs=77.1
Q ss_pred CCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhc---cCCCCChhhHHHH
Q psy7457 31 NPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKN---ITPDSDPQTILDL 107 (497)
Q Consensus 31 ~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~---~~P~d~~~~~~~~ 107 (497)
..++|+-.|.|++.+...- -+...|.=...+..-+.+|...|++. +|++-|++++.. ++|++.++.- ..
T Consensus 302 ~~~~a~~~~~~~L~~~~~~-----lg~~h~~~~~~~~~L~~~y~~~g~~~--eA~~~~~~~L~i~~~~lg~~Hp~~a-~~ 373 (429)
T 3qwp_A 302 KWEQVLAMCQAIISSNSER-----LPDINIYQLKVLDCAMDACINLGLLE--EALFYGTRTMEPYRIFFPGSHPVRG-VQ 373 (429)
T ss_dssp CHHHHHHHHHHHHTCSSCC-----CCTTSHHHHHHHHHHHHHHHHHTCHH--HHHHHHHHHHHHHHHHSCSSCHHHH-HH
T ss_pred cHHHHHHHHHHHHHhccCc-----CCccchHHHHHHHHHHHHHHhhccHH--HHHHHHHHHHHhHHHHcCCCChHHH-HH
Confidence 5567777777776643211 12334444677888899999999999 999999998854 2788876544 46
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCCh
Q psy7457 108 STRAAHVYHTARNFPQAASSLAIAFQYSAHLIRP 141 (497)
Q Consensus 108 ~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~ 141 (497)
+-.||.+|..+|++++|+.+|++|++-....++.
T Consensus 374 l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~ 407 (429)
T 3qwp_A 374 VMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGR 407 (429)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCT
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCC
Confidence 7789999999999999999999999966444433
No 211
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=94.68 E-value=0.85 Score=46.62 Aligned_cols=45 Identities=16% Similarity=-0.006 Sum_probs=28.6
Q ss_pred HhhcCCCCccHHHHHHHHHHHHHh-C-CcchhHHHHHHHHHHhccCCCCC
Q psy7457 53 IQRGLSKDTILDNRARRLRLCDEI-G-LKNRGFVLAGYQRYLKNITPDSD 100 (497)
Q Consensus 53 ~~~~~~~p~n~~~~~~RA~Ly~el-G-~~~~~~Al~~y~~il~~~~P~d~ 100 (497)
.++...+|+|+.+...|..++..+ | ... ++++.+.+++.. -|.+-
T Consensus 113 ~~~L~~nPKny~aW~hR~wlL~~l~~~~~~--~EL~~~~k~L~~-dpkNy 159 (349)
T 3q7a_A 113 NEFAVQNLKSYQVWHHRLLLLDRISPQDPV--SEIEYIHGSLLP-DPKNY 159 (349)
T ss_dssp HHHHHTTCCCHHHHHHHHHHHHHHCCSCCH--HHHHHHHHHTSS-CTTCH
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHhcCCChH--HHHHHHHHHHHh-CCCCH
Confidence 444555666666666666666666 5 566 666666666666 66554
No 212
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=94.60 E-value=0.029 Score=58.84 Aligned_cols=104 Identities=13% Similarity=0.013 Sum_probs=78.4
Q ss_pred CCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhcc---CCCCChhhHHHH
Q psy7457 31 NPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNI---TPDSDPQTILDL 107 (497)
Q Consensus 31 ~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~---~P~d~~~~~~~~ 107 (497)
.+++|+-.|-|++.+... .-+-..|.=...+..-+.+|..+|++. +|+.-|++.+... +|++.++.. ..
T Consensus 313 ~~~eA~~~~~~~L~i~~~-----~lg~~Hp~~a~~~~nLa~~y~~~g~~~--eA~~~~~~aL~i~~~~lG~~Hp~~a-~~ 384 (433)
T 3qww_A 313 SPSELLEICELSQEKMSS-----VFEDSNVYMLHMMYQAMGVCLYMQDWE--GALKYGQKIIKPYSKHYPVYSLNVA-SM 384 (433)
T ss_dssp CHHHHHHHHHHHHHHHTT-----TBCTTSHHHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHHHHHHSCSSCHHHH-HH
T ss_pred CHHHHHHHHHHHHHHhhC-----ccChhchHHHHHHHHHHHHHHhhcCHH--HHHHHHHHHHHHHHHHcCCCChHHH-HH
Confidence 456777777776664211 123344555677888999999999999 9999999988642 787776544 56
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChh
Q psy7457 108 STRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPE 142 (497)
Q Consensus 108 ~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~ 142 (497)
+..||.+|..+|++++|+.+|++|++-....++.+
T Consensus 385 l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~ 419 (433)
T 3qww_A 385 WLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKD 419 (433)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCC
Confidence 77999999999999999999999999664444443
No 213
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=94.56 E-value=0.21 Score=53.79 Aligned_cols=134 Identities=8% Similarity=-0.014 Sum_probs=100.7
Q ss_pred hHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCC----------cc
Q psy7457 11 PQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGL----------KN 80 (497)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~----------~~ 80 (497)
=+.|.++...+++.+... .-.++|+-++.+++. .+|+++.++..|..++..+|. +.
T Consensus 25 ~~~y~~~~~~~~~~~~~~-~~~eeal~~~~~~l~-------------~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~ 90 (567)
T 1dce_A 25 LKLYQSATQAVFQKRQAG-ELDESVLELTSQILG-------------ANPDFATLWNCRREVLQHLETEKSPEESAALVK 90 (567)
T ss_dssp HHHHHHHHHHHHHHHHTT-CCSHHHHHHHHHHHH-------------HCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcC-CCCHHHHHHHHHHHH-------------HCchhHHHHHHHHHHHHhcccccchhhhhhhHH
Confidence 356777777777654332 233455666666665 499999999999999999999 89
Q ss_pred hhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHccCCC-ChhHHHHHHHHHHhhc-c
Q psy7457 81 RGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTAR--NFPQAASSLAIAFQYSAHLI-RPEHCNLYLEVLLELK-R 156 (497)
Q Consensus 81 ~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~--~~~~Ai~~le~a~~~~~~~f-~~~~vNiLaEL~i~~k-~ 156 (497)
.|++.|.++++. .|.+. .+--+=+-++...+ +.++|++.++++++..|..+ -|..--.++. ..+ .
T Consensus 91 --~eL~~~~~~l~~-~pK~y-----~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~---~l~~~ 159 (567)
T 1dce_A 91 --AELGFLESCLRV-NPKSY-----GTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAA---QAAVA 159 (567)
T ss_dssp --HHHHHHHHHHHH-CTTCH-----HHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH---HTCCC
T ss_pred --HHHHHHHHHHHh-CCCCH-----HHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHH---HcCCC
Confidence 999999999999 99986 34445566777888 66999999999999998865 3666544433 345 7
Q ss_pred HHHHHHHHHHhch
Q psy7457 157 YETCVEVLRRFAN 169 (497)
Q Consensus 157 y~~al~~I~~~~~ 169 (497)
|+++++...+...
T Consensus 160 ~~~el~~~~~~I~ 172 (567)
T 1dce_A 160 PAEELAFTDSLIT 172 (567)
T ss_dssp HHHHHHHHHTTTT
T ss_pred hHHHHHHHHHHHH
Confidence 8888888766553
No 214
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=94.37 E-value=0.056 Score=58.29 Aligned_cols=111 Identities=11% Similarity=-0.101 Sum_probs=84.2
Q ss_pred HHHhhcCCCCccHHHHHHHHHHHHHhC--CcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcC-CHHHHHHH
Q psy7457 51 ILIQRGLSKDTILDNRARRLRLCDEIG--LKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTAR-NFPQAASS 127 (497)
Q Consensus 51 ~~~~~~~~~p~n~~~~~~RA~Ly~elG--~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~-~~~~Ai~~ 127 (497)
++.++...+|+|+.++..|+-++.++| ++. +|++.+.++++. -|.+- .+--.-.-+....+ ..++|++.
T Consensus 95 ~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~~~--~el~~~~k~l~~-d~~N~-----~aW~~R~~~l~~l~~~~~~el~~ 166 (567)
T 1dce_A 95 FLESCLRVNPKSYGTWHHRCWLLSRLPEPNWA--RELELCARFLEA-DERNF-----HCWDYRRFVAAQAAVAPAEELAF 166 (567)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHTCSSCCHH--HHHHHHHHHHHH-CTTCH-----HHHHHHHHHHHHTCCCHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcccccHH--HHHHHHHHHHhh-ccccc-----cHHHHHHHHHHHcCCChHHHHHH
Confidence 446666679999999999999999999 558 999999999999 88885 33334455566778 88999999
Q ss_pred HHHHHHHccCCC-ChhHHHHHHHHH-----------HhhccHHHHHHHHHHhch
Q psy7457 128 LAIAFQYSAHLI-RPEHCNLYLEVL-----------LELKRYETCVEVLRRFAN 169 (497)
Q Consensus 128 le~a~~~~~~~f-~~~~vNiLaEL~-----------i~~k~y~~al~~I~~~~~ 169 (497)
++++++.+|+.+ .|...-.+..-+ +..+.|+++++.+.+...
T Consensus 167 ~~~~I~~~p~n~saW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~ 220 (567)
T 1dce_A 167 TDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFF 220 (567)
T ss_dssp HHTTTTTTCCCHHHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCccHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHh
Confidence 999999998764 355543333322 123778999988876553
No 215
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=93.90 E-value=0.042 Score=50.15 Aligned_cols=72 Identities=15% Similarity=0.042 Sum_probs=59.5
Q ss_pred CcchhHHHHHHHhhcCCCC---chhHHhhcc-ccC-cccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhc
Q psy7457 206 PPEILSKFVITLVHLRSET---QFPTLLASL-KFD-VEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQE 280 (497)
Q Consensus 206 PiDLr~KLgI~ll~Lg~~~---~~~~l~~~l-~e~-~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~ 280 (497)
..+.++.+|.|+++.++.. ++-.+++.+ ..+ |+.-.| .+ +-+|-+++..
T Consensus 31 ~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd--~l------------------------Y~LAv~~~kl 84 (152)
T 1pc2_A 31 SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRD--YV------------------------FYLAVGNYRL 84 (152)
T ss_dssp CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHH--HH------------------------HHHHHHHHHT
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHH--HH------------------------HHHHHHHHHc
Confidence 7899999999999999544 566667666 555 666677 77 8899999999
Q ss_pred ccHHHHHHHHHHHhcCCCCChHH
Q psy7457 281 HYEAYAVQVLVLLVSSEKYNQPG 303 (497)
Q Consensus 281 g~y~~Al~~l~~L~~~~~y~~~~ 303 (497)
|+|..|++++..++..+.-|.-+
T Consensus 85 ~~Y~~A~~y~~~lL~ieP~n~QA 107 (152)
T 1pc2_A 85 KEYEKALKYVRGLLQTEPQNNQA 107 (152)
T ss_dssp SCHHHHHHHHHHHHHHCTTCHHH
T ss_pred cCHHHHHHHHHHHHhcCCCCHHH
Confidence 99999999999999999877433
No 216
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=93.61 E-value=0.37 Score=48.86 Aligned_cols=108 Identities=6% Similarity=-0.104 Sum_probs=79.2
Q ss_pred HHHhhcCCCCccHHHHHHHHHHHHHhCCc-chhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhc-----------
Q psy7457 51 ILIQRGLSKDTILDNRARRLRLCDEIGLK-NRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTA----------- 118 (497)
Q Consensus 51 ~~~~~~~~~p~n~~~~~~RA~Ly~elG~~-~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~----------- 118 (497)
++.++...||+|+.+...|..+...+|.. . .+++.+.+++.. .|.|. ++-.....+....
T Consensus 132 ~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~--eel~~~~~~I~~-~p~N~-----SAW~~R~~ll~~l~~~~~~~~~~~ 203 (331)
T 3dss_A 132 LCARFLEADERNFHCWDYRRFVAAQAAVAPA--EELAFTDSLITR-NFSNY-----SSWHYRSCLLPQLHPQPDSGPQGR 203 (331)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCCHH--HHHHHHHHHHHH-CSCCH-----HHHHHHHHHHHHHSCCC------C
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHhCcCHH--HHHHHHHHHHHH-CCCCH-----HHHHHHHHHHHHhhhccccccccc
Confidence 44555567999999999999999999994 8 999999999999 99885 3333444444433
Q ss_pred ---CCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhh-----------ccHHHHHHHHHHhc
Q psy7457 119 ---RNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLEL-----------KRYETCVEVLRRFA 168 (497)
Q Consensus 119 ---~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~-----------k~y~~al~~I~~~~ 168 (497)
+.++++++.+.+++...|+. -+--|-+-.|+... +.++++|+.+...-
T Consensus 204 ~~~~~~~eEle~~~~ai~~~P~d--~SaW~Y~r~ll~~~~~~~~~~~~~~~~l~~el~~~~ell 265 (331)
T 3dss_A 204 LPENVLLKELELVQNAFFTDPND--QSAWFYHRWLLGAGSGRCELSVEKSTVLQSELESCKELQ 265 (331)
T ss_dssp CCHHHHHHHHHHHHHHHHHSTTC--HHHHHHHHHHHHSSSCGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHhccCccccchHHHHHHHHHHHHHHHHH
Confidence 45789999999999999965 33334444444444 45777777777654
No 217
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=93.14 E-value=0.26 Score=51.10 Aligned_cols=110 Identities=9% Similarity=-0.088 Sum_probs=77.7
Q ss_pred HHHhhcCCCCccHHHHHHHHHHHHHh---C-Ccc-hhHHHH-HHHHHH--hccCCCCChhhHHHHHHHHHHHHHhcCCHH
Q psy7457 51 ILIQRGLSKDTILDNRARRLRLCDEI---G-LKN-RGFVLA-GYQRYL--KNITPDSDPQTILDLSTRAAHVYHTARNFP 122 (497)
Q Consensus 51 ~~~~~~~~~p~n~~~~~~RA~Ly~el---G-~~~-~~~Al~-~y~~il--~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~ 122 (497)
++.||...||++...+-.++..|--. | ..+ +..++. .+++.. .. -|.+. .+..-+|-.+.-.|+++
T Consensus 221 l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~-~~~~a-----~~~~alal~~l~~gd~d 294 (372)
T 3ly7_A 221 LLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPE-LNNLS-----IIYQIKAVSALVKGKTD 294 (372)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGG-GTTCH-----HHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhccc-CCcCH-----HHHHHHHHHHHhCCCHH
Confidence 34556667999999988888777422 1 111 111111 222221 22 34443 46667777888889999
Q ss_pred HHHHHHHHHHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 123 QAASSLAIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 123 ~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
.|+..+++++.-+| +|....++..++...|++++|+..+.+.-+
T Consensus 295 ~A~~~l~rAl~Ln~---s~~a~~llG~~~~~~G~~~eA~e~~~~Alr 338 (372)
T 3ly7_A 295 ESYQAINTGIDLEM---SWLNYVLLGKVYEMKGMNREAADAYLTAFN 338 (372)
T ss_dssp HHHHHHHHHHHHCC---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCC---CHHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 99999999999987 477778999999999999999999988765
No 218
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=93.10 E-value=0.27 Score=50.28 Aligned_cols=135 Identities=5% Similarity=-0.047 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhC-CcchhHHHHHHHH
Q psy7457 12 QEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIG-LKNRGFVLAGYQR 90 (497)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG-~~~~~~Al~~y~~ 90 (497)
..|..+.+.+.+-.......+ +|+-++.++|.. +|+++....-|..++..+| .+. ++++.+.+
T Consensus 51 ~~y~~~~~~~r~~~~~~e~se-~AL~lt~~~L~~-------------nP~~ytaWn~R~~iL~~l~~~l~--eEL~~~~~ 114 (349)
T 3q7a_A 51 EEYKDAMDYFRAIAAKEEKSE-RALELTEIIVRM-------------NPAHYTVWQYRFSLLTSLNKSLE--DELRLMNE 114 (349)
T ss_dssp HHHHHHHHHHHHHHHTTCCSH-HHHHHHHHHHHH-------------CTTCHHHHHHHHHHHHHTTCCHH--HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHh-------------CchhHHHHHHHHHHHHHhhhhHH--HHHHHHHH
Confidence 456666666665554443333 467777777664 9999999999999999999 599 99999999
Q ss_pred HHhccCCCCChhhHHHHHHHHHHHHHhc-C-CHHHHHHHHHHHHHHccCCC-ChhHHHHHHHHHHhhc-----cHHHHHH
Q psy7457 91 YLKNITPDSDPQTILDLSTRAAHVYHTA-R-NFPQAASSLAIAFQYSAHLI-RPEHCNLYLEVLLELK-----RYETCVE 162 (497)
Q Consensus 91 il~~~~P~d~~~~~~~~~k~LA~~Y~e~-~-~~~~Ai~~le~a~~~~~~~f-~~~~vNiLaEL~i~~k-----~y~~al~ 162 (497)
+++. .|.+.. +-.+-..+.-.. + +.+++++.++.+++.+|..+ .|..--.++.-+.... .+.++++
T Consensus 115 ~L~~-nPKny~-----aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe 188 (349)
T 3q7a_A 115 FAVQ-NLKSYQ-----VWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELD 188 (349)
T ss_dssp HHHT-TCCCHH-----HHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHH
T ss_pred HHHh-CCCcHH-----HHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHH
Confidence 9999 998862 222333333344 5 88999999999999998765 5666544444332211 1236666
Q ss_pred HHHHhc
Q psy7457 163 VLRRFA 168 (497)
Q Consensus 163 ~I~~~~ 168 (497)
...+..
T Consensus 189 ~~~k~I 194 (349)
T 3q7a_A 189 WCNEML 194 (349)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555443
No 219
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=92.09 E-value=1.1 Score=45.27 Aligned_cols=111 Identities=10% Similarity=-0.128 Sum_probs=84.4
Q ss_pred HHHhhcCCCCccHHHHHHHHHHHHHhCC--cchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCC-HHHHHHH
Q psy7457 51 ILIQRGLSKDTILDNRARRLRLCDEIGL--KNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARN-FPQAASS 127 (497)
Q Consensus 51 ~~~~~~~~~p~n~~~~~~RA~Ly~elG~--~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~-~~~Ai~~ 127 (497)
++.++...+|+|+.....|.-++..+|. +. .+++.+.+++.. -|.+-. +--.-.-+....|. .+++++.
T Consensus 96 ~~~~~L~~~PKny~aW~hR~wlL~~l~~~~~~--~EL~~~~k~l~~-dprNy~-----AW~~R~~vl~~l~~~~~eel~~ 167 (331)
T 3dss_A 96 FLESCLRVNPKSYGTWHHRCWLLSRLPEPNWA--RELELCARFLEA-DERNFH-----CWDYRRFVAAQAAVAPAEELAF 167 (331)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHCSSCCHH--HHHHHHHHHHHH-CTTCHH-----HHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHhccCcccHH--HHHHHHHHHHHh-CCCCHH-----HHHHHHHHHHHhCcCHHHHHHH
Confidence 3456667799999999999999999995 78 999999999999 898852 22333444456677 5899999
Q ss_pred HHHHHHHccCCC-ChhHHHHHHHHHH-----------hhccHHHHHHHHHHhch
Q psy7457 128 LAIAFQYSAHLI-RPEHCNLYLEVLL-----------ELKRYETCVEVLRRFAN 169 (497)
Q Consensus 128 le~a~~~~~~~f-~~~~vNiLaEL~i-----------~~k~y~~al~~I~~~~~ 169 (497)
++.+++.+|+.+ .|...-.++.-+. ..+.|+++++.+.+...
T Consensus 168 ~~~~I~~~p~N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~ 221 (331)
T 3dss_A 168 TDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFF 221 (331)
T ss_dssp HHHHHHHCSCCHHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHH
Confidence 999999999875 4666555444331 11678889988888664
No 220
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=92.08 E-value=0.48 Score=38.72 Aligned_cols=62 Identities=6% Similarity=0.035 Sum_probs=52.2
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHccCC----CCh-hHHHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 108 STRAAHVYHTARNFPQAASSLAIAFQYSAHL----IRP-EHCNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 108 ~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~----f~~-~~vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
.=.|+..+.+.+++..|+.-|+.|+...++. ++. .-.+.|+..|.++|++++|+...++...
T Consensus 8 c~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~ 74 (104)
T 2v5f_A 8 CFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLE 74 (104)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHh
Confidence 3489999999999999999999999977432 344 4477899999999999999999988764
No 221
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=91.94 E-value=1.1 Score=46.62 Aligned_cols=148 Identities=15% Similarity=0.205 Sum_probs=104.6
Q ss_pred HhhcCCCCccH-HHHH--HHHHHHHHhCCcchhHHHHHHHHHHhccCCC-CChhhHHHHHHHHHHHHHhcCCHHHHHHHH
Q psy7457 53 IQRGLSKDTIL-DNRA--RRLRLCDEIGLKNRGFVLAGYQRYLKNITPD-SDPQTILDLSTRAAHVYHTARNFPQAASSL 128 (497)
Q Consensus 53 ~~~~~~~p~n~-~~~~--~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~-d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~l 128 (497)
++=+.++...| +... +.+.+|-+.|++. +|++.+.++++. +.. |++...+++.=.-.++|+..++..+|..+|
T Consensus 86 ~~~a~~~~r~flr~~l~~kL~~l~~~~~~y~--~a~~~i~~l~~~-~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l 162 (394)
T 3txn_A 86 IEWAKQEKRTFLRQSLEARLIALYFDTALYT--EALALGAQLLRE-LKKLDDKNLLVEVQLLESKTYHALSNLPKARAAL 162 (394)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-HTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH--HHHHHHHHHHHH-HhccccchhHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 44455554544 4335 8899999999999 999999999998 544 668899999999999999999999999999
Q ss_pred HHHHHHccCC-CCh---hHHHHHHHHHH--hhccHHHHHHHHHHhchheeeeccCCCCCCCCCccccccccccccCCCCC
Q psy7457 129 AIAFQYSAHL-IRP---EHCNLYLEVLL--ELKRYETCVEVLRRFANIEITYFKLFPQDSTSGEESNIQITNYTVPSDPN 202 (497)
Q Consensus 129 e~a~~~~~~~-f~~---~~vNiLaEL~i--~~k~y~~al~~I~~~~~~~l~~~~~~~~D~e~d~~~~~~~~~~~~p~~l~ 202 (497)
..+-..-... -+| ..+....+++. ..++|++|...+-..-. . + +. ...|.
T Consensus 163 ~~a~~~~~ai~~~p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~-~--f-~~-----------------~~~~~--- 218 (394)
T 3txn_A 163 TSARTTANAIYCPPKVQGALDLQSGILHAADERDFKTAFSYFYEAFE-G--F-DS-----------------VDSVK--- 218 (394)
T ss_dssp HHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHH-H--H-TT-----------------TCHHH---
T ss_pred HHHHhhhccCCCCHHHHHHHHHHhhHHHHHhccCHHHHHHHHHHHHh-c--c-cc-----------------cccHH---
Confidence 9987643222 233 55777777665 48999999888755321 0 0 00 00011
Q ss_pred CCCCcchhHHHHHHHhhcCCCCchhHHh
Q psy7457 203 LVPPPEILSKFVITLVHLRSETQFPTLL 230 (497)
Q Consensus 203 l~lPiDLr~KLgI~ll~Lg~~~~~~~l~ 230 (497)
-+++-.-+++|-+=.++..++..++
T Consensus 219 ---~~~~lkYlvL~aLl~~~r~el~~~l 243 (394)
T 3txn_A 219 ---ALTSLKYMLLCKIMLGQSDDVNQLV 243 (394)
T ss_dssp ---HHHHHHHHHHHHHHTTCGGGHHHHH
T ss_pred ---HHHHHHHHHHHHHHcCCHHHHHHHh
Confidence 1455566888888888876665543
No 222
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=89.14 E-value=2.1 Score=39.57 Aligned_cols=118 Identities=11% Similarity=0.079 Sum_probs=74.4
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHH---HccCCCCh----hHHHHHHHHHHhhccHHHHHHHHHHhchh--eeeeccC
Q psy7457 107 LSTRAAHVYHTARNFPQAASSLAIAFQ---YSAHLIRP----EHCNLYLEVLLELKRYETCVEVLRRFANI--EITYFKL 177 (497)
Q Consensus 107 ~~k~LA~~Y~e~~~~~~Ai~~le~a~~---~~~~~f~~----~~vNiLaEL~i~~k~y~~al~~I~~~~~~--~l~~~~~ 177 (497)
.+++=.+..++.+.++.|+-+..-++. ..|+.++. ..+..+++.+...++|.+|....++.-.. .+.+...
T Consensus 22 ~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s 101 (167)
T 3ffl_A 22 NVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSK 101 (167)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 455666777889999999888777444 44666665 45899999999999999999998885321 1111110
Q ss_pred CCCCCCCCccccccccccccCCCCCCCCCcchhHHHHHHHhhcCCCCchhHHhhcc
Q psy7457 178 FPQDSTSGEESNIQITNYTVPSDPNLVPPPEILSKFVITLVHLRSETQFPTLLASL 233 (497)
Q Consensus 178 ~~~D~e~d~~~~~~~~~~~~p~~l~l~lPiDLr~KLgI~ll~Lg~~~~~~~l~~~l 233 (497)
. +..-.+. -..|.+..+.-..|+|.|++.|++.+|....+-..++.+
T Consensus 102 ~--------~~~~~~~-ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~I 148 (167)
T 3ffl_A 102 V--------RPSTGNS-ASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGI 148 (167)
T ss_dssp ------------------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTS
T ss_pred c--------ccccccc-CCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcC
Confidence 0 0000000 011222222114699999999999999999987777665
No 223
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=88.80 E-value=1.9 Score=36.76 Aligned_cols=76 Identities=12% Similarity=-0.094 Sum_probs=63.0
Q ss_pred hhhhHHHhhcCCCCccHHHHHHHHHHHHH----hCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHh----c
Q psy7457 47 KIEHILIQRGLSKDTILDNRARRLRLCDE----IGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHT----A 118 (497)
Q Consensus 47 ~~~~~~~~~~~~~p~n~~~~~~RA~Ly~e----lG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e----~ 118 (497)
+...++.+|+.. .+.+..+.-+.+|.+ .+++. +|++-|++.... .. .+..-.|+.+|.. .
T Consensus 43 ~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~--~A~~~~~~Aa~~----g~----~~a~~~Lg~~y~~G~g~~ 110 (138)
T 1klx_A 43 KLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLR--KAAQYYSKACGL----ND----QDGCLILGYKQYAGKGVV 110 (138)
T ss_dssp HHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHH--HHHHHHHHHHHT----TC----HHHHHHHHHHHHHTSSSC
T ss_pred HHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHH--HHHHHHHHHHcC----CC----HHHHHHHHHHHHCCCCCC
Confidence 344555555544 568999999999999 88999 999999999987 22 2578899999999 9
Q ss_pred CCHHHHHHHHHHHHHH
Q psy7457 119 RNFPQAASSLAIAFQY 134 (497)
Q Consensus 119 ~~~~~Ai~~le~a~~~ 134 (497)
++.++|+..|+++.+.
T Consensus 111 ~d~~~A~~~~~~Aa~~ 126 (138)
T 1klx_A 111 KNEKQAVKTFEKACRL 126 (138)
T ss_dssp CCHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHC
Confidence 9999999999999875
No 224
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=88.80 E-value=1.6 Score=40.10 Aligned_cols=111 Identities=14% Similarity=0.039 Sum_probs=85.0
Q ss_pred CCChHHHHHHHHHHHhhhcccccCC------ccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhCCcch
Q psy7457 8 YENPQEYYSLLNLVLSQHSIQVINP------DESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIGLKNR 81 (497)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~ 81 (497)
-.||+.|...+.++=.. .+| ++.+=+|+||++--+.+ + ...-..+=.+|=|=.+++++++..
T Consensus 10 p~~yd~W~~yl~llE~~-----g~p~~d~~l~rlrd~YerAia~~Pp~----k--~~~wrrYI~LWIrYA~~~ei~D~d- 77 (161)
T 4h7y_A 10 ANNPEDWLSLLLKLEKN-----SVPLSDALLNKLIGRYSQAIEALPPD----K--YGQNESFARIQVRFAELKAIQEPD- 77 (161)
T ss_dssp CCSHHHHHHHHHHHHHH-----TCSCCHHHHHHHHHHHHHHHHHSCGG----G--GTTCHHHHHHHHHHHHHHHHHCGG-
T ss_pred CCCHHHHHHHHHHHHHc-----CCCchhhHHHHHHHHHHHHHHcCCcc----c--cccHHHHHHHHHHHHHHHHhcCHH-
Confidence 46899999998765433 456 78788999998743222 1 223344667788888889999999
Q ss_pred hHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccC
Q psy7457 82 GFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAH 137 (497)
Q Consensus 82 ~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~ 137 (497)
+|-+.|+..++. |..+ -.+=-.-|+.=+.+|++.+|..++.+++..+|-
T Consensus 78 -~aR~vy~~a~~~---hKkF---AKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k 126 (161)
T 4h7y_A 78 -DARDYFQMARAN---CKKF---AFVHISFAQFELSQGNVKKSKQLLQKAVERGAV 126 (161)
T ss_dssp -GCHHHHHHHHHH---CTTB---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB
T ss_pred -HHHHHHHHHHHH---hHHH---HHHHHHHHHHHHHcccHHHHHHHHHHHhccCCC
Confidence 999999999986 4433 345556788888999999999999999998874
No 225
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=86.98 E-value=4.7 Score=41.66 Aligned_cols=100 Identities=12% Similarity=0.021 Sum_probs=81.0
Q ss_pred cHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCCh
Q psy7457 62 ILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRP 141 (497)
Q Consensus 62 n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~ 141 (497)
-.+...++|..|.+.|++. .|++.|.+++.. .... .+.+++.-.+.++++..+|...|...+.++-......-+|
T Consensus 130 ~~~~~~~la~~~~~~Gd~~--~A~~~~~~~~~~-~~~~--~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~ 204 (429)
T 4b4t_R 130 QAQAWINLGEYYAQIGDKD--NAEKTLGKSLSK-AIST--GAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDW 204 (429)
T ss_dssp CSSCCHHHHHHHHHHCCCT--THHHHHHHHHHH-HTCC--CSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCT
T ss_pred HHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHh-cCCh--HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCH
Confidence 3457889999999999999 999999999998 6654 3567899999999999999999999999997766666678
Q ss_pred hHHHHHHH----HHHhhccHHHHHHHHHH
Q psy7457 142 EHCNLYLE----VLLELKRYETCVEVLRR 166 (497)
Q Consensus 142 ~~vNiLaE----L~i~~k~y~~al~~I~~ 166 (497)
+-.|.|-. .++..++|.+|.+.+..
T Consensus 205 ~~~~~lk~~~gl~~l~~r~f~~Aa~~f~e 233 (429)
T 4b4t_R 205 ERRNRYKTYYGIHCLAVRNFKEAAKLLVD 233 (429)
T ss_dssp HHHHHHHHHHHHGGGGTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhChHHHHHHHHHH
Confidence 77664422 23456899998887654
No 226
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=86.16 E-value=1.1 Score=40.79 Aligned_cols=75 Identities=7% Similarity=-0.134 Sum_probs=64.1
Q ss_pred CCCCccHHHHHHHHHHHHHhC---CcchhHHHHHHHHHHhccC-CCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q psy7457 57 LSKDTILDNRARRLRLCDEIG---LKNRGFVLAGYQRYLKNIT-PDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAF 132 (497)
Q Consensus 57 ~~~p~n~~~~~~RA~Ly~elG---~~~~~~Al~~y~~il~~~~-P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~ 132 (497)
..+|.+.+.+++-|-.+.+.+ +.+ +++.-++.+++. - |.+ -.+.+=.||-.|+..+++++|.+..+.++
T Consensus 26 ~~~~~~~~~~F~ya~~Lv~S~~~~~~~--~gI~lLe~ll~~-~~p~~----~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL 98 (152)
T 1pc2_A 26 AAGSVSKSTQFEYAWCLVRSKYNDDIR--KGIVLLEELLPK-GSKEE----QRDYVFYLAVGNYRLKEYEKALKYVRGLL 98 (152)
T ss_dssp HTTCCCHHHHHHHHHHHHTCSSHHHHH--HHHHHHHHHHHH-SCHHH----HHHHHHHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred ccCCCcHHHHHHHHHHHHcCCCHHHHH--HHHHHHHHHHhc-CCccc----hHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 356678999999999998877 788 999999999999 5 422 24788899999999999999999999999
Q ss_pred HHccCC
Q psy7457 133 QYSAHL 138 (497)
Q Consensus 133 ~~~~~~ 138 (497)
+..|+.
T Consensus 99 ~ieP~n 104 (152)
T 1pc2_A 99 QTEPQN 104 (152)
T ss_dssp HHCTTC
T ss_pred hcCCCC
Confidence 999954
No 227
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=85.80 E-value=0.75 Score=40.65 Aligned_cols=72 Identities=17% Similarity=0.052 Sum_probs=56.6
Q ss_pred CcchhHHHHHHHhhcCCCCc---hhHHhhcc-ccC-cccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhc
Q psy7457 206 PPEILSKFVITLVHLRSETQ---FPTLLASL-KFD-VEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQE 280 (497)
Q Consensus 206 PiDLr~KLgI~ll~Lg~~~~---~~~l~~~l-~e~-~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~ 280 (497)
-.+.++.++.|++|-++... +-.++..+ ..+ |+.--| .. +-+|-+++..
T Consensus 34 s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd--~l------------------------Y~LAvg~ykl 87 (126)
T 1nzn_A 34 SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRD--YV------------------------FYLAVGNYRL 87 (126)
T ss_dssp CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHH--HH------------------------HHHHHHHHHT
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHH--HH------------------------HHHHHHHHHh
Confidence 67899999999999887665 44455555 433 544555 66 7899999999
Q ss_pred ccHHHHHHHHHHHhcCCCCChHH
Q psy7457 281 HYEAYAVQVLVLLVSSEKYNQPG 303 (497)
Q Consensus 281 g~y~~Al~~l~~L~~~~~y~~~~ 303 (497)
|+|..|+++...|+..+.-|.-+
T Consensus 88 g~Y~~A~~~~~~lL~~eP~n~QA 110 (126)
T 1nzn_A 88 KEYEKALKYVRGLLQTEPQNNQA 110 (126)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHH
T ss_pred hhHHHHHHHHHHHHHhCCCCHHH
Confidence 99999999999999999887444
No 228
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=85.73 E-value=2.1 Score=45.04 Aligned_cols=140 Identities=9% Similarity=0.028 Sum_probs=88.2
Q ss_pred ChHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHH--HhhcC-------------------------CCCcc
Q psy7457 10 NPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHIL--IQRGL-------------------------SKDTI 62 (497)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~--~~~~~-------------------------~~p~n 62 (497)
.|..|+..+.....+ .+++.|+=+|.|++.. +.+..+ .-+.. ..+..
T Consensus 212 ~~~lW~~ya~~~~~~-----~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 285 (493)
T 2uy1_A 212 AEEVYFFYSEYLIGI-----GQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKEL 285 (493)
T ss_dssp CHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHH
T ss_pred CHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhccccc
Confidence 489999998876543 3567777788887764 333222 11111 01111
Q ss_pred HHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHccCCCCh
Q psy7457 63 LDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTAR-NFPQAASSLAIAFQYSAHLIRP 141 (497)
Q Consensus 63 ~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~-~~~~Ai~~le~a~~~~~~~f~~ 141 (497)
...+...+.++.+.|... +|...|.+. +. |..... +--..|.+-...+ +.+.|..+|+.++..+|+. .
T Consensus 286 ~~lw~~y~~~~~r~~~~~--~AR~i~~~A-~~--~~~~~~----v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~--~ 354 (493)
T 2uy1_A 286 DLLRINHLNYVLKKRGLE--LFRKLFIEL-GN--EGVGPH----VFIYCAFIEYYATGSRATPYNIFSSGLLKHPDS--T 354 (493)
T ss_dssp HHHHHHHHHHHHHHHCHH--HHHHHHHHH-TT--SCCCHH----HHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTC--H
T ss_pred HHHHHHHHHHHHHcCCHH--HHHHHHHHh-hC--CCCChH----HHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCC--H
Confidence 233445566666777888 899999998 44 654322 2223344444334 6999999999999998864 3
Q ss_pred hHHHHHHHHHHhhccHHHHHHHHHH
Q psy7457 142 EHCNLYLEVLLELKRYETCVEVLRR 166 (497)
Q Consensus 142 ~~vNiLaEL~i~~k~y~~al~~I~~ 166 (497)
+-...++++.+..|..++|-.+..+
T Consensus 355 ~~~~~yid~e~~~~~~~~aR~l~er 379 (493)
T 2uy1_A 355 LLKEEFFLFLLRIGDEENARALFKR 379 (493)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 3456688888888888877666555
No 229
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=84.73 E-value=8.4 Score=40.57 Aligned_cols=99 Identities=10% Similarity=-0.026 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChh
Q psy7457 63 LDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPE 142 (497)
Q Consensus 63 ~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~ 142 (497)
.-.+--=...|.+.|+.. .|++-|..|.+.=+++|. ..-..|-..|...|+.++|.++++...++- -.-+..
T Consensus 105 ~~tyn~lI~~~~~~g~~~--~A~~l~~~M~~~g~~Pd~-----~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G-~~Pd~~ 176 (501)
T 4g26_A 105 EATFTNGARLAVAKDDPE--MAFDMVKQMKAFGIQPRL-----RSYGPALFGFCRKGDADKAYEVDAHMVESE-VVPEEP 176 (501)
T ss_dssp HHHHHHHHHHHHHHTCHH--HHHHHHHHHHHTTCCCCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHTT-CCCCHH
T ss_pred HHHHHHHHHHHHhcCCHH--HHHHHHHHHHHcCCCCcc-----ceehHHHHHHHHCCCHHHHHHHHHHHHhcC-CCCCHH
Confidence 555556677899999999 999999999876344453 345667788899999999999999987752 112446
Q ss_pred HHHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 143 HCNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 143 ~vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
..|+|+..|...|++++|.+++++.-.
T Consensus 177 ty~~Li~~~~~~g~~d~A~~ll~~Mr~ 203 (501)
T 4g26_A 177 ELAALLKVSMDTKNADKVYKTLQRLRD 203 (501)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCHHHHHHHHHHHHH
Confidence 689999999999999999999987643
No 230
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=84.68 E-value=1.4 Score=39.85 Aligned_cols=72 Identities=10% Similarity=-0.016 Sum_probs=59.1
Q ss_pred CcchhHHHHHHHhhcCCCCc---hhHHhhcc-ccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcc
Q psy7457 206 PPEILSKFVITLVHLRSETQ---FPTLLASL-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEH 281 (497)
Q Consensus 206 PiDLr~KLgI~ll~Lg~~~~---~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g 281 (497)
..+.++.++.||+|-.+... .-.+++.+ ..+++.--| .. +-+|-++...|
T Consensus 38 s~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~Rd--cL------------------------YyLAvg~ykl~ 91 (144)
T 1y8m_A 38 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRE--CL------------------------YYLTIGCYKLG 91 (144)
T ss_dssp CHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHH--HH------------------------HHHHHHHHTTT
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhH--HH------------------------HHHHHHHHHhh
Confidence 88999999999999998665 33455555 556665566 66 88999999999
Q ss_pred cHHHHHHHHHHHhcCCCCChHH
Q psy7457 282 YEAYAVQVLVLLVSSEKYNQPG 303 (497)
Q Consensus 282 ~y~~Al~~l~~L~~~~~y~~~~ 303 (497)
+|..|+++...|+..+.-|.-+
T Consensus 92 ~Y~~Ar~y~d~lL~~eP~n~QA 113 (144)
T 1y8m_A 92 EYSMAKRYVDTLFEHERNNKQV 113 (144)
T ss_dssp CHHHHHHHHHHHHHTCCCCHHH
T ss_pred hHHHHHHHHHHHHhcCCCcHHH
Confidence 9999999999999999988444
No 231
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=84.44 E-value=1.6 Score=39.12 Aligned_cols=72 Identities=10% Similarity=-0.016 Sum_probs=58.8
Q ss_pred CcchhHHHHHHHhhcCCCCc---hhHHhhcc-ccCcccccccchhhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhcc
Q psy7457 206 PPEILSKFVITLVHLRSETQ---FPTLLASL-KFDVEMYGTITVYLDIAEALIQEHYEAYAVQFKELVYLDIAEALIQEH 281 (497)
Q Consensus 206 PiDLr~KLgI~ll~Lg~~~~---~~~l~~~l-~e~~ee~~D~~Ly~~~~~~~~~~~~~~~~~~~~~~~~ldvaeAl~e~g 281 (497)
-++.++.++.||+|-++.+. +-.+++.+ ..+++.--| .. +-+|-++...|
T Consensus 39 s~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd--~L------------------------YyLAvg~yklg 92 (134)
T 3o48_A 39 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRE--CL------------------------YYLTIGCYKLG 92 (134)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHH--HH------------------------HHHHHHHHHHT
T ss_pred ChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHH--HH------------------------HHHHHHHHHhh
Confidence 67899999999999998755 33445555 566666667 77 88999999999
Q ss_pred cHHHHHHHHHHHhcCCCCChHH
Q psy7457 282 YEAYAVQVLVLLVSSEKYNQPG 303 (497)
Q Consensus 282 ~y~~Al~~l~~L~~~~~y~~~~ 303 (497)
+|..|+++...|+..+.-|.-+
T Consensus 93 dY~~Ar~y~d~lL~~eP~N~QA 114 (134)
T 3o48_A 93 EYSMAKRYVDTLFEHERNNKQV 114 (134)
T ss_dssp CHHHHHHHHHHHHTTCTTCHHH
T ss_pred hHHHHHHHHHHHHhhCCCCHHH
Confidence 9999999999999999887544
No 232
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=82.45 E-value=2.9 Score=42.14 Aligned_cols=94 Identities=9% Similarity=-0.073 Sum_probs=74.3
Q ss_pred hhhHHHhhcCCCCc--cHHHHHHHHHHHHHh-----CCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHh-cC
Q psy7457 48 IEHILIQRGLSKDT--ILDNRARRLRLCDEI-----GLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHT-AR 119 (497)
Q Consensus 48 ~~~~~~~~~~~~p~--n~~~~~~RA~Ly~el-----G~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e-~~ 119 (497)
....+.+|..-||+ +-..+.-.+.+|..+ |+.. +|.+.|++.+.+ .|... ++.--..|+.|.. .+
T Consensus 182 A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~e--kA~~~ferAL~L-nP~~~----id~~v~YA~~l~~~~g 254 (301)
T 3u64_A 182 AVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGME--KAHTAFEHLTRY-CSAHD----PDHHITYADALCIPLN 254 (301)
T ss_dssp HHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHH--HHHHHHHHHHHH-CCTTC----SHHHHHHHHHTTTTTT
T ss_pred HHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHH--HHHHHHHHHHHh-CCCCC----chHHHHHHHHHHHhcC
Confidence 33344566666998 666999999999996 9999 999999999999 99653 2566788888877 59
Q ss_pred CHHHHHHHHHHHHHHccCC-CChhHHHHHH
Q psy7457 120 NFPQAASSLAIAFQYSAHL-IRPEHCNLYL 148 (497)
Q Consensus 120 ~~~~Ai~~le~a~~~~~~~-f~~~~vNiLa 148 (497)
+.+.|...+++++.--|.. =+|.-.|...
T Consensus 255 d~~~a~~~L~kAL~a~p~~~P~~~lan~~~ 284 (301)
T 3u64_A 255 NRAGFDEALDRALAIDPESVPHNKLLVILS 284 (301)
T ss_dssp CHHHHHHHHHHHHHCCGGGCSSCHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCCCCCCChhHHHHHH
Confidence 9999999999999966653 4566666554
No 233
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=81.82 E-value=19 Score=36.23 Aligned_cols=21 Identities=14% Similarity=0.195 Sum_probs=20.1
Q ss_pred HHHHHHHHhcccHHHHHHHHH
Q psy7457 271 LDIAEALIQEHYEAYAVQVLV 291 (497)
Q Consensus 271 ldvaeAl~e~g~y~~Al~~l~ 291 (497)
.-+|..|.+.|+|.+|...|.
T Consensus 138 ~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 138 NTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp HHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHhhcCCHHHHHHHHH
Confidence 999999999999999999984
No 234
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=80.71 E-value=21 Score=36.15 Aligned_cols=99 Identities=9% Similarity=-0.065 Sum_probs=76.6
Q ss_pred HHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCC------h-----------hhHHHHHHHHHHHHHhcCCHHHHHHHHH
Q psy7457 67 ARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSD------P-----------QTILDLSTRAAHVYHTARNFPQAASSLA 129 (497)
Q Consensus 67 ~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~------~-----------~~~~~~~k~LA~~Y~e~~~~~~Ai~~le 129 (497)
..++.-...-|+.. .|++.+.+.+.+ ...+. . +..++++..+|..+...|+...|+..+.
T Consensus 119 ~~~~~~~~~~~~~~--~a~~~l~~Al~L-~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~ 195 (388)
T 2ff4_A 119 KTAGVHAAAAGRFE--QASRHLSAALRE-WRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELE 195 (388)
T ss_dssp HHHHHHHHHTTCHH--HHHHHHHHHHTT-CCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHhCCCHH--HHHHHHHHHHHh-cCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 33444344457888 899999999887 43221 1 2345677788999999999999999999
Q ss_pred HHHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhchh
Q psy7457 130 IAFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFANI 170 (497)
Q Consensus 130 ~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~~ 170 (497)
.++..+| ++-.-.-.|...|...|+..+|+++.++..+.
T Consensus 196 ~~~~~~P--~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~ 234 (388)
T 2ff4_A 196 ALTFEHP--YREPLWTQLITAYYLSDRQSDALGAYRRVKTT 234 (388)
T ss_dssp HHHHHST--TCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHhCC--CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 9999999 44455788888899999999999999887753
No 235
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=79.38 E-value=4.8 Score=41.59 Aligned_cols=75 Identities=9% Similarity=-0.119 Sum_probs=62.8
Q ss_pred hcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q psy7457 55 RGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQY 134 (497)
Q Consensus 55 ~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~ 134 (497)
+...+|.+...++--+..+--.|++. .|+..+++.+.+ .|.- ...-.++++|.-.|+.++|++.|++|+.-
T Consensus 269 a~~~~~~~a~~~~alal~~l~~gd~d--~A~~~l~rAl~L-n~s~------~a~~llG~~~~~~G~~~eA~e~~~~AlrL 339 (372)
T 3ly7_A 269 TLPELNNLSIIYQIKAVSALVKGKTD--ESYQAINTGIDL-EMSW------LNYVLLGKVYEMKGMNREAADAYLTAFNL 339 (372)
T ss_dssp TCGGGTTCHHHHHHHHHHHHHHTCHH--HHHHHHHHHHHH-CCCH------HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hcccCCcCHHHHHHHHHHHHhCCCHH--HHHHHHHHHHhc-CCCH------HHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 33566788888888877777789999 999999999999 7531 24467899999999999999999999999
Q ss_pred ccCC
Q psy7457 135 SAHL 138 (497)
Q Consensus 135 ~~~~ 138 (497)
.|..
T Consensus 340 ~P~~ 343 (372)
T 3ly7_A 340 RPGA 343 (372)
T ss_dssp SCSH
T ss_pred CCCc
Confidence 9963
No 236
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=79.30 E-value=8.5 Score=41.09 Aligned_cols=34 Identities=9% Similarity=0.013 Sum_probs=20.3
Q ss_pred CCCChHHHHHHHHHHHhhhcccccCCccceehhhcccCc
Q psy7457 7 SYENPQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTP 45 (497)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~ 45 (497)
.-.+|+.|..++.+-|.+. +.+.|.-||.+.-..
T Consensus 677 ~~~~~~~W~~la~~al~~~-----~~~~A~~~y~~~~d~ 710 (814)
T 3mkq_A 677 DESAEMKWRALGDASLQRF-----NFKLAIEAFTNAHDL 710 (814)
T ss_dssp TCCCHHHHHHHHHHHHHTT-----CHHHHHHHHHHHTCH
T ss_pred hhCcHhHHHHHHHHHHHcC-----CHHHHHHHHHHccCh
Confidence 3456777777777766643 344456666665544
No 237
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=79.23 E-value=13 Score=38.37 Aligned_cols=103 Identities=5% Similarity=-0.026 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHHccCC-CCh
Q psy7457 64 DNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTA-RNFPQAASSLAIAFQYSAHL-IRP 141 (497)
Q Consensus 64 ~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~-~~~~~Ai~~le~a~~~~~~~-f~~ 141 (497)
..+.+-+.+|.+.|+.. +-.+....+... ++.-+...--+++|.|-..+... +..+.=+++...+++.+... =.|
T Consensus 20 ~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~kak~~k~v~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~~~r~f 96 (394)
T 3txn_A 20 QGILQQGELYKQEGKAK--ELADLIKVTRPF-LSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQEKRTF 96 (394)
T ss_dssp HHHHHHHHHHHHHTCHH--HHHHHHHHTTTG-GGGSCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHcCCHH--HHHHHHHHHHHH-HHHhchHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 56778899999999999 888888777777 77777777778888888888764 44456677777777755432 334
Q ss_pred hHHHH---HHHHHHhhccHHHHHHHHHHhch
Q psy7457 142 EHCNL---YLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 142 ~~vNi---LaEL~i~~k~y~~al~~I~~~~~ 169 (497)
=-.++ |+.||+..|.|.+|++.|.+.-+
T Consensus 97 lr~~l~~kL~~l~~~~~~y~~a~~~i~~l~~ 127 (394)
T 3txn_A 97 LRQSLEARLIALYFDTALYTEALALGAQLLR 127 (394)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 34444 89999999999999999987664
No 238
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=79.10 E-value=8.3 Score=41.17 Aligned_cols=87 Identities=8% Similarity=-0.016 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHhCCcchhHHHHHHHHHHhc-----c--CCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccC
Q psy7457 65 NRARRLRLCDEIGLKNRGFVLAGYQRYLKN-----I--TPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAH 137 (497)
Q Consensus 65 ~~~~RA~Ly~elG~~~~~~Al~~y~~il~~-----~--~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~ 137 (497)
..-+-|.++.+.|++. .|.++|.++-.. + ...+ .+.++.+|+.....|+.+.|..+|..
T Consensus 683 ~W~~la~~al~~~~~~--~A~~~y~~~~d~~~l~~l~~~~~~-----~~~~~~~~~~a~~~~~~~~A~~~~~~------- 748 (814)
T 3mkq_A 683 KWRALGDASLQRFNFK--LAIEAFTNAHDLESLFLLHSSFNN-----KEGLVTLAKDAETTGKFNLAFNAYWI------- 748 (814)
T ss_dssp HHHHHHHHHHHTTCHH--HHHHHHHHHTCHHHHHHHHHHTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHcCCHH--HHHHHHHHccChhhhHHHHHHcCC-----HHHHHHHHHHHHHcCchHHHHHHHHH-------
Confidence 3345588899999999 999999985222 0 2333 25677888888888888888877665
Q ss_pred CCChhHHHHHHHHHHhhccHHHHHHHHHHhc
Q psy7457 138 LIRPEHCNLYLEVLLELKRYETCVEVLRRFA 168 (497)
Q Consensus 138 ~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~ 168 (497)
..++.-..++|...++|.+|+.+-+++.
T Consensus 749 ---~g~~~~a~~~~~~~~~~~~A~~lA~~~~ 776 (814)
T 3mkq_A 749 ---AGDIQGAKDLLIKSQRFSEAAFLGSTYG 776 (814)
T ss_dssp ---HTCHHHHHHHHHHTTCHHHHHHHHHHTT
T ss_pred ---cCCHHHHHHHHHHcCChHHHHHHHHHhC
Confidence 3567777888888889999988877755
No 239
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=79.00 E-value=14 Score=38.52 Aligned_cols=125 Identities=10% Similarity=-0.064 Sum_probs=85.1
Q ss_pred hHHHHHHHHHHHhhhcccccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHHHHHHhC-CcchhHHHHHHH
Q psy7457 11 PQEYYSLLNLVLSQHSIQVINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLRLCDEIG-LKNRGFVLAGYQ 89 (497)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~Ly~elG-~~~~~~Al~~y~ 89 (497)
+.+|..-++....+. +++.|+=.|.|+. +++.....+...|.+-..+| +.. +|...|+
T Consensus 286 ~~lw~~y~~~~~r~~-----~~~~AR~i~~~A~--------------~~~~~~~v~i~~A~lE~~~~~d~~--~ar~ife 344 (493)
T 2uy1_A 286 DLLRINHLNYVLKKR-----GLELFRKLFIELG--------------NEGVGPHVFIYCAFIEYYATGSRA--TPYNIFS 344 (493)
T ss_dssp HHHHHHHHHHHHHHH-----CHHHHHHHHHHHT--------------TSCCCHHHHHHHHHHHHHHHCCSH--HHHHHHH
T ss_pred HHHHHHHHHHHHHcC-----CHHHHHHHHHHhh--------------CCCCChHHHHHHHHHHHHHCCChH--HHHHHHH
Confidence 366777777665433 3455666666662 23334667777888877777 588 9999999
Q ss_pred HHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhc
Q psy7457 90 RYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFA 168 (497)
Q Consensus 90 ~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~ 168 (497)
+.++. +|.+. +.++ ..+....+.|+.+.|..+|+++. . ...-.+.++++=...|..+.+-+++++.-
T Consensus 345 ~al~~-~~~~~-~~~~----~yid~e~~~~~~~~aR~l~er~~----k--~~~lw~~~~~fE~~~G~~~~~r~v~~~~~ 411 (493)
T 2uy1_A 345 SGLLK-HPDST-LLKE----EFFLFLLRIGDEENARALFKRLE----K--TSRMWDSMIEYEFMVGSMELFRELVDQKM 411 (493)
T ss_dssp HHHHH-CTTCH-HHHH----HHHHHHHHHTCHHHHHHHHHHSC----C--BHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred HHHHH-CCCCH-HHHH----HHHHHHHHcCCHHHHHHHHHHHH----H--HHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 99999 88763 4333 35666778999999999999972 1 23445666666666677777666665543
No 240
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=78.18 E-value=15 Score=37.37 Aligned_cols=21 Identities=19% Similarity=0.052 Sum_probs=19.9
Q ss_pred HHHHHHHHhcccHHHHHHHHH
Q psy7457 271 LDIAEALIQEHYEAYAVQVLV 291 (497)
Q Consensus 271 ldvaeAl~e~g~y~~Al~~l~ 291 (497)
.-+|+.|.+.|+|.+|...|.
T Consensus 140 ~~ig~~~~~e~~~~~Ae~H~i 160 (336)
T 3lpz_A 140 HVVGTLYVEEGEFEAAEKHLV 160 (336)
T ss_dssp HHHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHHHHccCCHHHHHHHHH
Confidence 999999999999999999993
No 241
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=75.77 E-value=5.3 Score=36.92 Aligned_cols=81 Identities=11% Similarity=0.012 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHhCCcchhHHHHHHHHHHhcc--CCCCCh---------------hhH--HHHHHHHHHHHHhcCCHHH
Q psy7457 63 LDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNI--TPDSDP---------------QTI--LDLSTRAAHVYHTARNFPQ 123 (497)
Q Consensus 63 ~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~--~P~d~~---------------~~~--~~~~k~LA~~Y~e~~~~~~ 123 (497)
++...=.|..+-.-|+++ +|...|++.|+.- +|.... +.+ .++--.+|+.|.+.|+.++
T Consensus 63 ~~~l~~ladalf~~~eyr--rA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~ 140 (167)
T 3ffl_A 63 YQLLVYHADSLFHDKEYR--NAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKD 140 (167)
T ss_dssp HHHHHHHHHHHHHTTCHH--HHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHcccHHH--HHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHH
Confidence 556777889999999999 9999999985542 332210 000 2566789999999999999
Q ss_pred HHHHHHHHHHHccCCCChhHHHHHHH
Q psy7457 124 AASSLAIAFQYSAHLIRPEHCNLYLE 149 (497)
Q Consensus 124 Ai~~le~a~~~~~~~f~~~~vNiLaE 149 (497)
||..|+.+ |..-.--.+||++.
T Consensus 141 Ai~~Le~I----p~k~Rt~kvnm~La 162 (167)
T 3ffl_A 141 AIAILDGI----PSRQRTPKINMLLA 162 (167)
T ss_dssp HHHHHHTS----CGGGCCHHHHHHHH
T ss_pred HHHHHhcC----CchhcCHHHHHHHH
Confidence 99998763 44444456776653
No 242
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=74.65 E-value=6.2 Score=40.14 Aligned_cols=65 Identities=14% Similarity=0.027 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHcc
Q psy7457 64 DNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSA 136 (497)
Q Consensus 64 ~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~ 136 (497)
....+++..+.+.|++. .|+....+++.. .|.+. .+.+.+-..|+..|+..+|++.|+.+-....
T Consensus 172 ~a~~~~~~~~l~~g~~~--~a~~~l~~~~~~-~P~~E-----~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~ 236 (388)
T 2ff4_A 172 LAHTAKAEAEIACGRAS--AVIAELEALTFE-HPYRE-----PLWTQLITAYYLSDRQSDALGAYRRVKTTLA 236 (388)
T ss_dssp HHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-STTCH-----HHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHH--HHHHHHHHHHHh-CCCCH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 44556788889999999 999999999999 99986 6889999999999999999999999877653
No 243
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=74.44 E-value=12 Score=41.99 Aligned_cols=80 Identities=11% Similarity=0.123 Sum_probs=61.9
Q ss_pred HHHHHHHHHhccCCCCChh------hHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCC-ChhHHHHHHHHHHhhcc
Q psy7457 84 VLAGYQRYLKNITPDSDPQ------TILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLI-RPEHCNLYLEVLLELKR 156 (497)
Q Consensus 84 Al~~y~~il~~~~P~d~~~------~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f-~~~~vNiLaEL~i~~k~ 156 (497)
+++.+..++.. +|+.+.+ ..-.++..=|+.+..-|+++.|+.+=.+|..-.|+.| +|. .|++.|+.+|+
T Consensus 311 ~l~~~~~~~~~-l~~~~~~~~~~~~~~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~---~La~vYi~l~d 386 (754)
T 4gns_B 311 TLDPLLSLLND-LPPRDADSARLMNCMSDLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWY---NLARCHIKKEE 386 (754)
T ss_dssp HHHHHHHHHHT-CSSCCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHH---HHHHHHHHTTC
T ss_pred HHHHhhhhhhh-hcccccccccccCcchHHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHH---HHHHHHHHhcc
Confidence 44444555555 6665521 1124666678999999999999999999999999876 575 68999999999
Q ss_pred HHHHHHHHHHh
Q psy7457 157 YETCVEVLRRF 167 (497)
Q Consensus 157 y~~al~~I~~~ 167 (497)
|+.||-+|...
T Consensus 387 ~e~ALLtLNSc 397 (754)
T 4gns_B 387 YEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHhcC
Confidence 99999999763
No 244
>2qfl_A Inositol-1-monophosphatase; impase extragenic suppressor, dimerization, hydrolase; 1.90A {Escherichia coli}
Probab=72.51 E-value=2.5 Score=40.87 Aligned_cols=54 Identities=15% Similarity=0.239 Sum_probs=42.0
Q ss_pred cCcCCcchhhhhhhhhhhHHHHHHhccccCeeEEecCCCCceeecCCCCCCCCCeEEEec
Q psy7457 437 SNVNVQGEEVKKLDVLSNELFVNMLTSSYSTCLLVSEENETALEIHHQEASTGDPCVRLD 496 (497)
Q Consensus 437 Gs~N~~GE~QkkLDV~Anelf~~aL~~s~~Va~~aSEE~e~~i~v~~~~~~~G~Y~V~fD 496 (497)
...+..||.+...|..+++++.+.|++...-.++.|||..... . ..++|+.++|
T Consensus 31 ~~~k~~~d~vT~aD~~ae~~i~~~L~~~~P~~~ilgEE~~~~~--~----~~~~~~WiiD 84 (267)
T 2qfl_A 31 ASQKGSNDFVTNVDKAAEAVIIDTIRKSYPQHTIITEESGELE--G----TDQDVQWVID 84 (267)
T ss_dssp CCSSSCCHHHHHHHHHHHHHHHHHHHHHCTTEEEEETTTEEEC--C----SEEEEEEEEE
T ss_pred eeecCCCCchHHHHHHHHHHHHHHHHHHCCCCEEEeCCCCCCC--C----CCCCCEEEEE
Confidence 3457788999999999999999999988667899999976432 1 1245777776
No 245
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=68.18 E-value=12 Score=37.71 Aligned_cols=108 Identities=13% Similarity=0.049 Sum_probs=81.1
Q ss_pred cCCCCccHHHHHHHHHHHHH-hCC----cc----hhHHHHHHHHHHhccCCCC-ChhhHHHHHHHHHHHHHhc-----CC
Q psy7457 56 GLSKDTILDNRARRLRLCDE-IGL----KN----RGFVLAGYQRYLKNITPDS-DPQTILDLSTRAAHVYHTA-----RN 120 (497)
Q Consensus 56 ~~~~p~n~~~~~~RA~Ly~e-lG~----~~----~~~Al~~y~~il~~~~P~d-~~~~~~~~~k~LA~~Y~e~-----~~ 120 (497)
..-+|++++.++=.+...-. +|. .+ -.+|....++.+.+ -|.- +| ..-.-|+.+|... |+
T Consensus 145 ~~~~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleL-DP~~~~G----sA~~~LG~lY~~vPp~~gGd 219 (301)
T 3u64_A 145 SRCTRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDL-WPSYQEG----AVWNVLTKFYAAAPESFGGG 219 (301)
T ss_dssp TTCCGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHH-CTTHHHH----HHHHHHHHHHHHSCTTTTCC
T ss_pred HHcCccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHh-CCCcccC----HHHHHHHHHHHhCCCccCCC
Confidence 34467888877666666544 443 21 13788889999999 6661 12 3667888999985 99
Q ss_pred HHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhh-ccHHHHHHHHHHhch
Q psy7457 121 FPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLEL-KRYETCVEVLRRFAN 169 (497)
Q Consensus 121 ~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~-k~y~~al~~I~~~~~ 169 (497)
.++|...|++++.-+|.. +.....-+++-++.. ++++.+.+.+++.-+
T Consensus 220 ~ekA~~~ferAL~LnP~~-~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~ 268 (301)
T 3u64_A 220 MEKAHTAFEHLTRYCSAH-DPDHHITYADALCIPLNNRAGFDEALDRALA 268 (301)
T ss_dssp HHHHHHHHHHHHHHCCTT-CSHHHHHHHHHTTTTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCC-CchHHHHHHHHHHHhcCCHHHHHHHHHHHHc
Confidence 999999999999999954 245667788888885 999999999988654
No 246
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=60.10 E-value=66 Score=33.23 Aligned_cols=102 Identities=10% Similarity=0.034 Sum_probs=75.2
Q ss_pred HHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCChhH-
Q psy7457 65 NRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRPEH- 143 (497)
Q Consensus 65 ~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~- 143 (497)
...+-|.+|.+-|++. .|++..+.+..-..-.++...-+++.=.-.++|++.+|..+|..++.++-.+.-+.....+
T Consensus 139 l~~~La~i~e~~g~~~--eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~l 216 (445)
T 4b4t_P 139 VTKDLVEIKKEEGKID--EAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESL 216 (445)
T ss_dssp HHHHHHHHHHHHTCHH--HHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHH
T ss_pred HHHHHHHHHHHccCHH--HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHH
Confidence 4455689999999999 9999999998763445566777888889999999999999999999887443322222222
Q ss_pred ----HHHHHHHHHhhccHHHHHHHHHHhc
Q psy7457 144 ----CNLYLEVLLELKRYETCVEVLRRFA 168 (497)
Q Consensus 144 ----vNiLaEL~i~~k~y~~al~~I~~~~ 168 (497)
-...+.++...+.|.+|-+......
T Consensus 217 k~~~~~~~~~~~~~e~~y~~a~~~y~e~~ 245 (445)
T 4b4t_P 217 KLEYYNLLVKISLHKREYLEVAQYLQEIY 245 (445)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 3455666777788988877655443
No 247
>1xi6_A Extragenic suppressor; structural genomics, southeast collaboratory for structural genomics hyperthermophIle, PSI; 2.80A {Pyrococcus furiosus} SCOP: e.7.1.1
Probab=58.90 E-value=8.3 Score=37.27 Aligned_cols=47 Identities=28% Similarity=0.308 Sum_probs=32.4
Q ss_pred CcchhhhhhhhhhhHHHHHHhccccCeeEEecCCCCceeecCCCCCCCCCeEEEec
Q psy7457 441 VQGEEVKKLDVLSNELFVNMLTSSYSTCLLVSEENETALEIHHQEASTGDPCVRLD 496 (497)
Q Consensus 441 ~~GE~QkkLDV~Anelf~~aL~~s~~Va~~aSEE~e~~i~v~~~~~~~G~Y~V~fD 496 (497)
..||.+...|..+++++.+.|++.. ..+.|||..... . .++++.++|
T Consensus 46 ~~~d~VT~aD~~ae~~i~~~L~~~~--~~ilgEE~~~~~--~-----~~~~~WiiD 92 (262)
T 1xi6_A 46 PSGDETKLVDKLAEDLILSRITELG--VNVVSEEVGVID--N-----ESEYTVIVD 92 (262)
T ss_dssp -------HHHHHHHHHHHHHHGGGT--CEEEETTTEEEC--C-----CCSEEEEEE
T ss_pred CCCCchhHHHHHHHHHHHHHHHHhC--CEEEcCCcCCCC--C-----CCCEEEEEE
Confidence 3779999999999999999999877 899999975432 1 356777777
No 248
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=57.00 E-value=22 Score=35.20 Aligned_cols=102 Identities=17% Similarity=0.058 Sum_probs=71.4
Q ss_pred HHHhhcCCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy7457 51 ILIQRGLSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAI 130 (497)
Q Consensus 51 ~~~~~~~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~ 130 (497)
.+....+++|.|.+.|+--.+|++=.|++. ||.+..+...++ .|.-. ..|..|.+. =.|-..=+.
T Consensus 19 ~~~~~VR~~P~da~~R~~LfqLLcv~G~w~--RA~~QL~~~a~l-~p~~~---------~~a~~yr~l---I~aE~~R~~ 83 (273)
T 1zbp_A 19 LLIEAIKASPKDASLRSSFIELLCIDGDFE--RADEQLMQSIKL-FPEYL---------PGASQLRHL---VKAAQARKD 83 (273)
T ss_dssp HHHHHHHTCTTCHHHHHHHHHHHHHHTCHH--HHHHHHHHHHHH-CGGGH---------HHHHHHHHH---HHHHHHHHH
T ss_pred HHHHHHHhCCcCHHHHHHHHHHHHhcCCHH--HHHHHHHHHHHh-Cchhh---------HHHHHHHHH---HHHHHHHHH
Confidence 456778899999999999999999999999 999999999999 77653 344444321 122233334
Q ss_pred HHH--HccCCCC--hhHHHHHHHHHHhh--ccHHHHHHHHHHh
Q psy7457 131 AFQ--YSAHLIR--PEHCNLYLEVLLEL--KRYETCVEVLRRF 167 (497)
Q Consensus 131 a~~--~~~~~f~--~~~vNiLaEL~i~~--k~y~~al~~I~~~ 167 (497)
+|. .-|..+. ++-+-.|++.+... |+..+|...-.+.
T Consensus 84 vfaG~~~P~~~g~~~~w~~~ll~Al~~~~~G~~~~A~~lr~~A 126 (273)
T 1zbp_A 84 FAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQI 126 (273)
T ss_dssp HTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHcCCCCCCCCCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Confidence 554 2355553 45566666666555 8888888776554
No 249
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=55.53 E-value=15 Score=37.75 Aligned_cols=65 Identities=8% Similarity=-0.076 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCC-hhHHHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 105 LDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIR-PEHCNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 105 ~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~-~~~vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
..+...+|+.|.+.|+.+.|+++|.++.+++.+.-. .+-+--.+.+++..+.|..+...+.+...
T Consensus 131 ~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~ 196 (429)
T 4b4t_R 131 AQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNS 196 (429)
T ss_dssp SSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 346678999999999999999999999999876422 23344456678889999999999988654
No 250
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=53.45 E-value=37 Score=32.10 Aligned_cols=75 Identities=8% Similarity=0.006 Sum_probs=56.3
Q ss_pred CCCCccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCC---------------CCChhhHHHHHHHHHHHHHhcCCH
Q psy7457 57 LSKDTILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITP---------------DSDPQTILDLSTRAAHVYHTARNF 121 (497)
Q Consensus 57 ~~~p~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P---------------~d~~~~~~~~~k~LA~~Y~e~~~~ 121 (497)
+++-+-....+=.+..|..+.+++ +|+.+.++++..... +.+.+ ++. -.+|.++-..|+.
T Consensus 56 L~~lNT~Ts~YYk~LCy~klKdYk--kA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkE-fFy--~l~a~lltq~g~r 130 (242)
T 3kae_A 56 LHKLNTCTSKYYESLCYKKKKDYK--KAIKSLESILEGKVERDPDVDARIQEMFVDPGDEE-FFE--SLLGDLCTLSGYR 130 (242)
T ss_dssp HHTCCBHHHHHHHHHHHHHTTCHH--HHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHH-HHH--HHHHHHHHHTTCH
T ss_pred HHhcchHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhcccccCcccccccceeeeccchHH-HHH--HHHHHHHHHhcCH
Confidence 444455778888899999999999 999999999932111 11222 322 3578888999999
Q ss_pred HHHHHHHHHHHHHcc
Q psy7457 122 PQAASSLAIAFQYSA 136 (497)
Q Consensus 122 ~~Ai~~le~a~~~~~ 136 (497)
++||..+...|.++|
T Consensus 131 ~EaI~y~~~Sf~~~~ 145 (242)
T 3kae_A 131 EEGIGHYVRSFGKSF 145 (242)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred HHhhhHhhhhcCCcc
Confidence 999999999998887
No 251
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=52.17 E-value=28 Score=30.06 Aligned_cols=37 Identities=27% Similarity=0.190 Sum_probs=28.5
Q ss_pred HHHHHHHHhcccHHHHHHHHHHHhcCCCCChHHHHHHHHHH
Q psy7457 271 LDIAEALIQEHYEAYAVQVLVLLVSSEKYNQPGVWKQLAET 311 (497)
Q Consensus 271 ldvaeAl~e~g~y~~Al~~l~~L~~~~~y~~~~vwl~lAeC 311 (497)
+==.-.+|+.|.|++|+.+..++- |-+..-|..+++-
T Consensus 44 lIR~sSLmNrG~Yq~Al~l~~~~c----~pdlepw~ALce~ 80 (116)
T 2p58_C 44 LIRLSSLMNRGDYASALQQGNKLA----YPDLEPWLALCEY 80 (116)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTTSC----CGGGHHHHHHHHH
T ss_pred HHHHHHHHcchhHHHHHHhcCCCC----CchHHHHHHHHHH
Confidence 444678999999999999998775 5555668877664
No 252
>2fvz_A Inositol monophosphatase 2; inositol metabolism, structural genomics, structural genomics consortium, SGC, hydrolase; 2.40A {Homo sapiens} PDB: 2czh_A 2czi_A 2czk_A 2ddk_A
Probab=48.35 E-value=15 Score=35.53 Aligned_cols=52 Identities=19% Similarity=0.280 Sum_probs=33.1
Q ss_pred cchhhhhhhhhhhHHHHHHhccccCeeEEecCCCCceeecCCCCCCCCCeEEEec
Q psy7457 442 QGEEVKKLDVLSNELFVNMLTSSYSTCLLVSEENETALEIHHQEASTGDPCVRLD 496 (497)
Q Consensus 442 ~GE~QkkLDV~Anelf~~aL~~s~~Va~~aSEE~e~~i~v~~~~~~~G~Y~V~fD 496 (497)
.+|.+...|..+++++++.|++...-.++.|||....-... ...++++.++|
T Consensus 35 ~~d~VT~aD~~ae~~i~~~L~~~~P~~~ilgEE~~~~~~~~---~~~~~~~WiiD 86 (273)
T 2fvz_A 35 AADLVTETDHLVEDLIISELRERFPSHRFIAEEAAASGAKC---VLTHSPTWIID 86 (273)
T ss_dssp -----CHHHHHHHHHHHHHHHTTSTTCEECCCCC-----CC---CCCSSCEEEEE
T ss_pred CCCceeHHHHHHHHHHHHHHHHHCCCCeEEeCCCCCCCCcc---CCCCCCEEEEe
Confidence 57889999999999999999988767899999985432111 11345666666
No 253
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=43.62 E-value=28 Score=29.98 Aligned_cols=39 Identities=15% Similarity=-0.010 Sum_probs=28.9
Q ss_pred hhHHHHHHHHhcccHHHHHHHHHHHhcCCCCChHHHHHHHHHH
Q psy7457 269 VYLDIAEALIQEHYEAYAVQVLVLLVSSEKYNQPGVWKQLAET 311 (497)
Q Consensus 269 ~~ldvaeAl~e~g~y~~Al~~l~~L~~~~~y~~~~vwl~lAeC 311 (497)
|-+==.-.+|+.|.|++|+.+..++- |-+..-|..+++-
T Consensus 41 v~lIR~sSLmNrG~Yq~Al~l~~~~c----~pdlepw~ALce~ 79 (115)
T 2uwj_G 41 ARLIRISSLANQGRYQEALAFAHGNP----WPALEPWFALCEW 79 (115)
T ss_dssp HHHHHHHHHHHTTCHHHHHGGGTTCC----CGGGHHHHHHHHH
T ss_pred HHHHHHHHHHcchhHHHHHHhcCCCC----CchHHHHHHHHHH
Confidence 33445678999999999999987765 5555568877664
No 254
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=41.73 E-value=1.3e+02 Score=26.10 Aligned_cols=33 Identities=12% Similarity=-0.023 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccC
Q psy7457 105 LDLSTRAAHVYHTARNFPQAASSLAIAFQYSAH 137 (497)
Q Consensus 105 ~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~ 137 (497)
.+.+=.||--|+..|++.+|.+..+.+++..|+
T Consensus 74 Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~ 106 (126)
T 1nzn_A 74 RDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQ 106 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCC
Confidence 455555566666666666666666666665553
No 255
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=40.11 E-value=1.2e+02 Score=31.35 Aligned_cols=63 Identities=10% Similarity=0.045 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCCCCh----hHHHHHHHHHHhhccHHHHHHHHHHhc
Q psy7457 106 DLSTRAAHVYHTARNFPQAASSLAIAFQYSAHLIRP----EHCNLYLEVLLELKRYETCVEVLRRFA 168 (497)
Q Consensus 106 ~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~f~~----~~vNiLaEL~i~~k~y~~al~~I~~~~ 168 (497)
.+-+.||++|-+.|++.+|.+++...........+- +-+..-+.|++..+.|.+|-..+++..
T Consensus 138 rl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~ 204 (445)
T 4b4t_P 138 RVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKIL 204 (445)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 455789999999999999999999987654433332 334455667888899999988877743
No 256
>1vdw_A Hypothetical protein PH1897; homodimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; 1.30A {Pyrococcus horikoshii} SCOP: e.7.1.1
Probab=37.44 E-value=23 Score=33.81 Aligned_cols=48 Identities=23% Similarity=0.280 Sum_probs=34.8
Q ss_pred CC-cchhhhhhhhhhhHHHHHHhccccCeeEEecCCCCceeecCCCCCCCCCeEEEec
Q psy7457 440 NV-QGEEVKKLDVLSNELFVNMLTSSYSTCLLVSEENETALEIHHQEASTGDPCVRLD 496 (497)
Q Consensus 440 N~-~GE~QkkLDV~Anelf~~aL~~s~~Va~~aSEE~e~~i~v~~~~~~~G~Y~V~fD 496 (497)
+. .+|.+...|..+++++.+.|++.. ..+.|||.... +. .++++.++|
T Consensus 36 K~~~~d~vT~aD~~~e~~i~~~L~~~~--~~ilgEE~~~~---~~----~~~~~WiiD 84 (254)
T 1vdw_A 36 ISPSGDETKVVDKVAENIIISKFKDLG--VNVVSEEIGRI---DQ----GSDYTVVVD 84 (254)
T ss_dssp C-----CEEHHHHHHHHHHHHHHHHTT--CEEEETTTEEE---CC----SCSEEEEEE
T ss_pred cCCCCCcchHHHHHHHHHHHHHHHHhC--CEEEeCCcCCC---CC----CCCEEEEEe
Confidence 44 678999999999999999999877 89999997532 11 345777776
No 257
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=34.55 E-value=45 Score=37.45 Aligned_cols=60 Identities=12% Similarity=-0.028 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHhCCcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy7457 63 LDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAI 130 (497)
Q Consensus 63 ~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~ 130 (497)
...+--+|.-+...|++. -|++.=++.... .|.+ +..| -.||++|+.+|+++.|+=.+-.
T Consensus 337 ~~LL~~Qa~FLl~K~~~e--lAL~~Ak~AV~~-aPse-F~tW----~~La~vYi~l~d~e~ALLtLNS 396 (754)
T 4gns_B 337 SDLLNIQTNFLLNRGDYE--LALGVSNTSTEL-ALDS-FESW----YNLARCHIKKEEYEKALFAINS 396 (754)
T ss_dssp HHHHHHHHHHHHHTTCHH--HHHHHHHHHHHH-CSSC-HHHH----HHHHHHHHHTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHhccCcHH--HHHHHHHHHHhc-Cchh-hHHH----HHHHHHHHHhccHHHHHHHHhc
Confidence 446667777777899999 999999999999 8866 4544 4899999999999999965433
No 258
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=33.23 E-value=80 Score=31.21 Aligned_cols=54 Identities=19% Similarity=0.083 Sum_probs=46.7
Q ss_pred HHHhcCCHHHHHHHHHHHHHHccCCCChhHHHHHHHHHHhhccHHHHHHHHHHhch
Q psy7457 114 VYHTARNFPQAASSLAIAFQYSAHLIRPEHCNLYLEVLLELKRYETCVEVLRRFAN 169 (497)
Q Consensus 114 ~Y~e~~~~~~Ai~~le~a~~~~~~~f~~~~vNiLaEL~i~~k~y~~al~~I~~~~~ 169 (497)
.....+++..|++.++..+..+|.. -+.--.|.+|+.-.|.|++|++.|+..+.
T Consensus 6 ~ll~~g~L~~al~~~~~~VR~~P~d--a~~R~~LfqLLcv~G~w~RA~~QL~~~a~ 59 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAIKASPKD--ASLRSSFIELLCIDGDFERADEQLMQSIK 59 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHHHTCTTC--HHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHhCCcC--HHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 4567899999999999999999965 44556789999999999999999998775
No 259
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=31.86 E-value=57 Score=34.03 Aligned_cols=50 Identities=20% Similarity=0.095 Sum_probs=39.4
Q ss_pred hhhhHHHHHHHHhcccHHHHHHHHHHHhc-----CCCCC-hHHHHHHHHHHHHHhh
Q psy7457 267 ELVYLDIAEALIQEHYEAYAVQVLVLLVS-----SEKYN-QPGVWKQLAETYEKSE 316 (497)
Q Consensus 267 ~~~~ldvaeAl~e~g~y~~Al~~l~~L~~-----~~~y~-~~~vwl~lAeCy~~l~ 316 (497)
|.||.++++.+.+-+.|+.|+.+|..|.. .-.|. +..+..++|++|.++.
T Consensus 92 e~L~~~~i~~f~kg~~~E~ai~l~k~L~~~yE~~~~Dy~~Ls~~~~~~a~~y~~I~ 147 (436)
T 2yin_A 92 ETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147 (436)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44559999999999999999999998874 23343 6668888888888754
No 260
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=26.71 E-value=2.3e+02 Score=25.83 Aligned_cols=94 Identities=14% Similarity=0.028 Sum_probs=60.1
Q ss_pred HHHHHHHHhhhccc-ccCCccceehhhcccCcchhhhHHHhhcCCCCccHHHHHHHHH-HHHHhCCcchhHHHHHHHHHH
Q psy7457 15 YSLLNLVLSQHSIQ-VINPDESRYILSRVRTPKKIEHILIQRGLSKDTILDNRARRLR-LCDEIGLKNRGFVLAGYQRYL 92 (497)
Q Consensus 15 ~~~~~~~~~~~~~~-~~~~~~~~y~~~r~~~~~~~~~~~~~~~~~~p~n~~~~~~RA~-Ly~elG~~~~~~Al~~y~~il 92 (497)
.++++-|=+--++. -.|.+-.+|||.++=..+ -+.+-|. ..-+.|... +-=+-+..++
T Consensus 59 v~vLd~IGkiFDis~C~NlKrVi~C~~~~n~~s------------------e~vd~ALd~lv~~~KkD--qLdki~~~~l 118 (172)
T 1wy6_A 59 FQVLDKIGSYFDLDKCQNLKSVVECGVINNTLN------------------EHVNKALDILVIQGKRD--KLEEIGREIL 118 (172)
T ss_dssp HHHHHHHGGGSCGGGCSCTHHHHHHHHHTTCCC------------------HHHHHHHHHHHHTTCHH--HHHHHHHHHC
T ss_pred HHHHHHHhhhcCcHhhhcHHHHHHHHHHhcchH------------------HHHHHHHHHHHHhccHh--HHHHHHHHHh
Confidence 35566666666666 679999999999876632 1223332 222333332 2223333334
Q ss_pred hccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q psy7457 93 KNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQY 134 (497)
Q Consensus 93 ~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~ 134 (497)
.. .|.++ +++-.+|..|-+.|+..+|-+++.+|-++
T Consensus 119 ~n-~~~~~-----~~l~kia~Ay~Klg~~r~a~eLl~~AC~k 154 (172)
T 1wy6_A 119 KN-NEVSA-----SILVAIANALRRVGDERDATTLLIEACKK 154 (172)
T ss_dssp ---CCSCH-----HHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred cc-CCCCh-----HHHHHHHHHHHHhcchhhHHHHHHHHHHh
Confidence 55 55554 68899999999999999999999988664
No 261
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=25.02 E-value=1.2e+02 Score=25.38 Aligned_cols=50 Identities=12% Similarity=-0.003 Sum_probs=35.7
Q ss_pred hhhhHHHHHHHHhcccHHHHHHHHHHHh-cCCCCChHHHH-HHHHHHHHHhh
Q psy7457 267 ELVYLDIAEALIQEHYEAYAVQVLVLLV-SSEKYNQPGVW-KQLAETYEKSE 316 (497)
Q Consensus 267 ~~~~ldvaeAl~e~g~y~~Al~~l~~L~-~~~~y~~~~vw-l~lAeCy~~l~ 316 (497)
.+...+=|.-+.+.|.|.+|+-+|+... .+++--...+. .-+++|-.++.
T Consensus 53 ~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ten~~i~ki~~fyl~ec~kkla 104 (106)
T 2vkj_A 53 ARSLIAEGKDLFETANYGEALVFFEKALNLSDNEEIKKIASFYLEECRKKLA 104 (106)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcchhHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHhc
Confidence 4466888899999999999999999877 33332233333 56788877653
No 262
>3b8b_A CYSQ, sulfite synthesis pathway protein; 3'-phosphoadenosine-5'-phosphosulfate (PAPS) 3'-phosphatase, structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=23.84 E-value=55 Score=31.89 Aligned_cols=37 Identities=19% Similarity=0.225 Sum_probs=31.2
Q ss_pred cCCcchhhhhhhhhhhHHHHHHhccccCeeEEecCCCCc
Q psy7457 439 VNVQGEEVKKLDVLSNELFVNMLTSSYSTCLLVSEENET 477 (497)
Q Consensus 439 ~N~~GE~QkkLDV~Anelf~~aL~~s~~Va~~aSEE~e~ 477 (497)
.+..+|.+-..|..+++++.+.|++ -. .++.|||...
T Consensus 53 ~K~~~d~VT~aD~~aE~~I~~~L~~-~P-~~ilgEE~~~ 89 (292)
T 3b8b_A 53 RKADNSPLTIADRKAHEAIVAILNE-TP-FPVLSEEGKH 89 (292)
T ss_dssp --CTTSHHHHHHHHHHHHHHHHHTT-SS-SCEEETTCCC
T ss_pred ECCCCCeeEHHHHHHHHHHHHHHHh-CC-CeEEeecCCC
Confidence 3556789999999999999999999 77 9999999753
No 263
>2d2s_A Exocyst complex component EXO84; tethering complex, EXO84P, endocytosis/exocytosis complex; 2.85A {Saccharomyces cerevisiae} SCOP: a.118.17.2
Probab=21.96 E-value=2e+02 Score=27.26 Aligned_cols=103 Identities=9% Similarity=0.042 Sum_probs=74.5
Q ss_pred ccHHHHHHHHHHHHHhCCcchhHHHHHHHHHHhcc-------C-CCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q psy7457 61 TILDNRARRLRLCDEIGLKNRGFVLAGYQRYLKNI-------T-PDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAF 132 (497)
Q Consensus 61 ~n~~~~~~RA~Ly~elG~~~~~~Al~~y~~il~~~-------~-P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~ 132 (497)
......-+-..++.++|+-. +|.+.|.+..... + ...+ ...++..|+.+|... +..+++-|..+|
T Consensus 89 ~~~~~~r~~v~~L~rLg~~~--~A~~lfL~~rs~~i~~~~r~l~~~gd---~~~Yi~~Ls~i~Fs~--I~~t~~~f~~~F 161 (235)
T 2d2s_A 89 NEIVHLKSGTENMIKLGLPE--QALDLFLQNRSNFIQDLILQIGSVDN---PTNYLTQLAVIRFQT--IKKTVEDFQDIF 161 (235)
T ss_dssp SSHHHHHHHHHHHHHTTCHH--HHHHHHHHHHHHHHHHHHHCC--CCS---HHHHHHHHHHHHHHH--HHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHCCChh--HHHHHHHHHHHHHHHHHHHHhcccCC---HHHHHHHHHHHHHHH--HHHHHHHHHHHh
Confidence 33555666678899999999 9999998765421 2 1121 246888899988864 778888899988
Q ss_pred HH-c----cCCCCh--hHHHHHHHHHHhh-----ccHHHHHHHHHHhchh
Q psy7457 133 QY-S----AHLIRP--EHCNLYLEVLLEL-----KRYETCVEVLRRFANI 170 (497)
Q Consensus 133 ~~-~----~~~f~~--~~vNiLaEL~i~~-----k~y~~al~~I~~~~~~ 170 (497)
.. . ...+.| +++..++.++..+ +-|.+|+++.+.+|..
T Consensus 162 ~~~~~~~~S~lV~Wa~~eve~f~~l~~rqv~~~~~l~~ecv~i~~~~~~~ 211 (235)
T 2d2s_A 162 KELGAKISSILVDWCSDEVDNHFKLIDKQLLNDEMLSPGSIKSSRKQIDG 211 (235)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHHHHTTC---CCHHHHHHHHHHHHG
T ss_pred CCCCcccccHHHHHHHHHHHHHHHHHHHHccCCccHHHHHHHHHHHHHHH
Confidence 75 2 235678 6688888887765 4577999999999963
No 264
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=21.88 E-value=74 Score=28.21 Aligned_cols=69 Identities=6% Similarity=-0.098 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHhC---CcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCC
Q psy7457 63 LDNRARRLRLCDEIG---LKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHL 138 (497)
Q Consensus 63 ~~~~~~RA~Ly~elG---~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~ 138 (497)
.+..|+-|--+-.-. +.+ +++.-++.+++. -|... .+.+=.||--|...|+++.|....+.+++..|+.
T Consensus 40 ~qt~F~yAw~Lv~S~~~~d~~--~GI~LLe~l~~~-~~~~~----Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N 111 (134)
T 3o48_A 40 IQSRFNYAWGLIKSTDVNDER--LGVKILTDIYKE-AESRR----RECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNN 111 (134)
T ss_dssp HHHHHHHHHHHHHSSCHHHHH--HHHHHHHHHHHH-CGGGH----HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTC
T ss_pred hhhHHHHHHHHHcCCCHHHHH--HHHHHHHHHHhc-Ccchh----HHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCC
Confidence 345555553333332 334 788888889888 66443 5788899999999999999999999999999854
No 265
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=21.35 E-value=1.3e+02 Score=26.97 Aligned_cols=69 Identities=6% Similarity=-0.098 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHhC---CcchhHHHHHHHHHHhccCCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCC
Q psy7457 63 LDNRARRLRLCDEIG---LKNRGFVLAGYQRYLKNITPDSDPQTILDLSTRAAHVYHTARNFPQAASSLAIAFQYSAHL 138 (497)
Q Consensus 63 ~~~~~~RA~Ly~elG---~~~~~~Al~~y~~il~~~~P~d~~~~~~~~~k~LA~~Y~e~~~~~~Ai~~le~a~~~~~~~ 138 (497)
.+..|+-|-.+-.-. +.+ +++.-++.+++. -|... .+.+=.||--|+.+|++++|.+..+.+++..|+.
T Consensus 39 ~~t~F~YAw~Lv~S~~~~di~--~GI~LLe~l~~~-~~~~~----RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n 110 (144)
T 1y8m_A 39 IQSRFNYAWGLIKSTDVNDER--LGVKILTDIYKE-AESRR----RECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNN 110 (144)
T ss_dssp HHHHHHHHHHHHHSSSHHHHH--HHHHHHHHHHHH-CCSTH----HHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHHcCCCHHHHH--HHHHHHHHHHhc-Cccch----hHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCc
Confidence 555666655554433 344 788889999988 77654 5788899999999999999999999999999954
Done!