BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7458
(139 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VXK0|NIPSN_DROME Protein NipSnap OS=Drosophila melanogaster GN=Nipsnap PE=2 SV=2
Length = 273
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 103/139 (74%), Positives = 119/139 (85%), Gaps = 1/139 (0%)
Query: 1 EFQVLHKEQGQTVRSRHLQYLLAFSYWPAIETRSGAPNIYEVRSYSLKPGTMIEWGNNWA 60
E+ L +E+ + +RSRHLQYLLAFSYWP I +R+G NIYE+RSY L PGTMIEWGNNWA
Sbjct: 136 EYLSLMQERSKFLRSRHLQYLLAFSYWPQIASRTGK-NIYEMRSYRLTPGTMIEWGNNWA 194
Query: 61 RAITHRRNNDEAFAGFFSQVGRLYNVHHFWCYKDLASRKETRESAWRSPGWDECVAYTVP 120
RAI +R++N+EAFAGFFSQ+GRLYNVHH WCYK L RKETRE+AWRSPGWDECVAYTVP
Sbjct: 195 RAINYRKHNNEAFAGFFSQIGRLYNVHHIWCYKSLQDRKETREAAWRSPGWDECVAYTVP 254
Query: 121 LIREMQSRILLPTSFSPTQ 139
LIREM R+L PT FSP+Q
Sbjct: 255 LIREMHCRVLAPTEFSPSQ 273
>sp|O55125|NIPS1_MOUSE Protein NipSnap homolog 1 OS=Mus musculus GN=Nipsnap1 PE=1 SV=1
Length = 284
Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 84/139 (60%), Positives = 102/139 (73%), Gaps = 1/139 (0%)
Query: 1 EFQVLHKEQGQTVRSRHLQYLLAFSYWPAIETRSGAPNIYEVRSYSLKPGTMIEWGNNWA 60
E+ KE+ + + SR Q LL FS+W + R+G PNIYE+R+Y LKPGTMIEWGNNWA
Sbjct: 147 EYLEFRKERSKMLLSRRNQLLLEFSFWNEPQPRAG-PNIYELRTYKLKPGTMIEWGNNWA 205
Query: 61 RAITHRRNNDEAFAGFFSQVGRLYNVHHFWCYKDLASRKETRESAWRSPGWDECVAYTVP 120
RAI +R+ N EA GFFSQ+G LY VHH W YKDL SR+ETR +AWR GWDE V YTVP
Sbjct: 206 RAIKYRQENQEAVGGFFSQIGELYVVHHLWAYKDLQSREETRNAAWRKRGWDENVYYTVP 265
Query: 121 LIREMQSRILLPTSFSPTQ 139
L+R M+SRI++P SP Q
Sbjct: 266 LVRHMESRIMIPLKISPLQ 284
>sp|Q9BPW8|NIPS1_HUMAN Protein NipSnap homolog 1 OS=Homo sapiens GN=NIPSNAP1 PE=1 SV=1
Length = 284
Score = 178 bits (452), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 84/139 (60%), Positives = 101/139 (72%), Gaps = 1/139 (0%)
Query: 1 EFQVLHKEQGQTVRSRHLQYLLAFSYWPAIETRSGAPNIYEVRSYSLKPGTMIEWGNNWA 60
E+ +E+ Q + SR Q LL FS+W + R G PNIYE+R+Y LKPGTMIEWGNNWA
Sbjct: 147 EYLEFRRERSQMLLSRRNQLLLEFSFWNEPQPRMG-PNIYELRTYKLKPGTMIEWGNNWA 205
Query: 61 RAITHRRNNDEAFAGFFSQVGRLYNVHHFWCYKDLASRKETRESAWRSPGWDECVAYTVP 120
RAI +R+ N EA GFFSQ+G LY VHH W YKDL SR+ETR +AWR GWDE V YTVP
Sbjct: 206 RAIKYRQENQEAVGGFFSQIGELYVVHHLWAYKDLQSREETRNAAWRKRGWDENVYYTVP 265
Query: 121 LIREMQSRILLPTSFSPTQ 139
L+R M+SRI++P SP Q
Sbjct: 266 LVRHMESRIMIPLKISPLQ 284
>sp|Q9PU58|NIPS2_DANRE Protein NipSnap homolog 2 OS=Danio rerio GN=gbas PE=2 SV=2
Length = 286
Score = 168 bits (426), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 81/139 (58%), Positives = 100/139 (71%), Gaps = 1/139 (0%)
Query: 1 EFQVLHKEQGQTVRSRHLQYLLAFSYWPAIETRSGAPNIYEVRSYSLKPGTMIEWGNNWA 60
EF E+G+ + SR Q LL FS+W R G PNIYE+RSY L+PGTMIEWGN WA
Sbjct: 149 EFLEYRSERGKMLLSRRNQLLLEFSFWNEPVPRDG-PNIYELRSYQLRPGTMIEWGNYWA 207
Query: 61 RAITHRRNNDEAFAGFFSQVGRLYNVHHFWCYKDLASRKETRESAWRSPGWDECVAYTVP 120
RAI +R++N EA GFFSQ+G LY VHH W YKDL SR++TR +AW+ GWDE V YTVP
Sbjct: 208 RAIGYRQHNREAVGGFFSQIGDLYMVHHLWAYKDLQSREDTRNAAWQHEGWDEVVYYTVP 267
Query: 121 LIREMQSRILLPTSFSPTQ 139
LI+ M+SRI++P SP +
Sbjct: 268 LIQHMESRIMIPLKNSPLK 286
>sp|O75323|NIPS2_HUMAN Protein NipSnap homolog 2 OS=Homo sapiens GN=GBAS PE=1 SV=1
Length = 286
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/139 (56%), Positives = 98/139 (70%), Gaps = 1/139 (0%)
Query: 1 EFQVLHKEQGQTVRSRHLQYLLAFSYWPAIETRSGAPNIYEVRSYSLKPGTMIEWGNNWA 60
EF K + + SR Q LL FS+W RSG PNIYE+RSY L+PGTMIEWGN WA
Sbjct: 149 EFLEFRKARSDMLLSRKNQLLLEFSFWNEPVPRSG-PNIYELRSYQLRPGTMIEWGNYWA 207
Query: 61 RAITHRRNNDEAFAGFFSQVGRLYNVHHFWCYKDLASRKETRESAWRSPGWDECVAYTVP 120
RAI R++ +EA GFFSQ+G+LY VHH W Y+DL +R++ R +AW GW+E V YTVP
Sbjct: 208 RAIRFRQDGNEAVGGFFSQIGQLYMVHHLWAYRDLQTREDIRNAAWHKHGWEELVYYTVP 267
Query: 121 LIREMQSRILLPTSFSPTQ 139
LI+EM+SRI++P SP Q
Sbjct: 268 LIQEMESRIMIPLKTSPLQ 286
>sp|O55126|NIPS2_MOUSE Protein NipSnap homolog 2 OS=Mus musculus GN=Gbas PE=2 SV=1
Length = 281
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 76/139 (54%), Positives = 97/139 (69%), Gaps = 1/139 (0%)
Query: 1 EFQVLHKEQGQTVRSRHLQYLLAFSYWPAIETRSGAPNIYEVRSYSLKPGTMIEWGNNWA 60
EF K + + SR Q LL FS+W R G PNIYE+RSY L+PGTMIEWGN WA
Sbjct: 144 EFVNFRKARSDMLLSRKNQLLLEFSFWNEPVPRPG-PNIYELRSYQLRPGTMIEWGNYWA 202
Query: 61 RAITHRRNNDEAFAGFFSQVGRLYNVHHFWCYKDLASRKETRESAWRSPGWDECVAYTVP 120
RAI R++++EA GFFSQ+G+LY V H W Y+DL +R++ R +AW GW+E V YTVP
Sbjct: 203 RAIRFRQDSNEAIGGFFSQIGQLYMVDHLWAYRDLQTREDIRNAAWHKHGWEELVYYTVP 262
Query: 121 LIREMQSRILLPTSFSPTQ 139
LI+EM+SRI++P SP Q
Sbjct: 263 LIQEMESRIMIPLKTSPLQ 281
>sp|P34492|YMQ1_CAEEL Putative NipSnap protein K02D10.1 OS=Caenorhabditis elegans
GN=K02D10.1 PE=2 SV=4
Length = 526
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 81/115 (70%), Gaps = 3/115 (2%)
Query: 23 AFSYWPAIETRSGAPN-IYEVRSYSLKPGTMIEWGNNWARAITHRRNNDEAFAGFFSQVG 81
+FSYW E R PN +Y++RSY L+PGTMI+W + WA+ I +RR ++ GFF+QVG
Sbjct: 411 SFSYWREPEQR--PPNHVYDLRSYVLQPGTMIDWASAWAKGIQYRREANQDVGGFFAQVG 468
Query: 82 RLYNVHHFWCYKDLASRKETRESAWRSPGWDECVAYTVPLIREMQSRILLPTSFS 136
+LY V+H W Y ++ R +TR + W PGWD VA TVPLI++MQS+IL PT +S
Sbjct: 469 QLYVVYHIWAYPSMSGRNDTRHATWAKPGWDATVANTVPLIKKMQSKILTPTKYS 523
>sp|Q54I58|NIPSN_DICDI Protein NipSnap homolog OS=Dictyostelium discoideum GN=nipsnap PE=3
SV=1
Length = 223
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%)
Query: 33 RSGAPNIYEVRSYSLKPGTMIEWGNNWARAITHRRNNDEAFAGFFSQVGRLYNVHHFWCY 92
+S ++E+R+Y KPG + +W ++ R+ E F+S+ G L + H W Y
Sbjct: 121 KSNENKVWELRTYQSKPGKLGQWAIDFTTGFAERKKISEPVGVFYSEFGPLNTIVHLWPY 180
Query: 93 KDLASRKETRESAWRSPGWDECVAYTVPLIREMQSRILLPTSF 135
K R R+ A ++P W E VA T + M+S+ ++P
Sbjct: 181 KSFEDRFRIRDLALKNPVWVETVAKTTANLDSMESKTIIPVKL 223
>sp|Q9CQE1|NPS3B_MOUSE Protein NipSnap homolog 3B OS=Mus musculus GN=Nipsnap3b PE=1 SV=1
Length = 247
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Query: 38 NIYEVRSYSLKPGTMIEWGNNWARAI-THRRNNDEAFAGFF-SQVGRLYNVHHFWCYKDL 95
+YE+ ++ +KPG WGN + RA+ H G F ++ G L VH W +
Sbjct: 144 GVYELATFQMKPGGPALWGNAFKRAVNAHVELGYSTLVGVFHTEYGALNRVHVLWWNESA 203
Query: 96 ASRKETRESAWRSPGWDECVAYTVPLIREMQSRILLPTSFSPTQ 139
SR R + P V +V + Q+ L+PTSFSP +
Sbjct: 204 DSRAAGRHWSHEDPRVVAAVRESVSYLESQQNTFLIPTSFSPLK 247
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Query: 29 AIETRSGAPNIYEVRSYSLKPGTMIEWGNNWARAITHRRNNDEAFAGFFSQV--GRLYNV 86
A R YE R+Y LKP E+ N+ ++ H R G+++ GR V
Sbjct: 26 ATGPRQSNGTFYEFRTYFLKPSKTNEFLENFKNSV-HLRTAHSEMIGYWTVEFGGRTNRV 84
Query: 87 HHFWCYKDLASRKETRESAWRSPGWDE 113
H W Y + A R R++ + W E
Sbjct: 85 FHIWKYDNFAHRTAVRKALAKDKEWQE 111
>sp|Q5RAA9|NPS3A_PONAB Protein NipSnap homolog 3A OS=Pongo abelii GN=NIPSNAP3A PE=2 SV=1
Length = 247
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 39 IYEVRSYSLKPGTMIEWGNNWARAI-THRRNNDEAFAGFF-SQVGRLYNVHHFWCYKDLA 96
+YE+ ++ +KPG WG+ + RA+ H G F ++ G L VH W +
Sbjct: 145 VYELATFQMKPGGPALWGDAFKRAVHAHVNLGYTKLVGVFHTEYGALNRVHVLWWNESAD 204
Query: 97 SRKETRESAWRSPGWDECVAYTVPLIREMQSRILLPTSFSPTQ 139
SR R + P V +V + Q+ +L+PTSFSP +
Sbjct: 205 SRAAGRHKSHEDPRVVAAVRESVNYLVSQQNMLLIPTSFSPLK 247
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 39 IYEVRSYSLKPGTMIEWGNNWARAITHRRNNDEAFAGFFSQV--GRLYNVHHFWCYKDLA 96
YE RSY LKP M E+ N+ + H R G++S GR+ V H W Y + A
Sbjct: 36 FYEFRSYYLKPSKMNEFLENFKKN-AHLRTAHSELVGYWSVEFGGRMNTVFHIWKYDNFA 94
Query: 97 SRKETRESAWRSPGWDECVAYTVP---LIREMQSRI 129
R E R++ + W E + +P LI + +S I
Sbjct: 95 HRTEVRKALAKDKEWQE--QFLIPNLALIDKQESEI 128
>sp|Q9UFN0|NPS3A_HUMAN Protein NipSnap homolog 3A OS=Homo sapiens GN=NIPSNAP3A PE=1 SV=2
Length = 247
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 39 IYEVRSYSLKPGTMIEWGNNWARAI-THRRNNDEAFAGFF-SQVGRLYNVHHFWCYKDLA 96
+YE+ ++ +KPG WG+ + RA+ H G F ++ G L VH W +
Sbjct: 145 VYELATFQMKPGGPALWGDAFKRAVHAHVNLGYTKLVGVFHTEYGALNRVHVLWWNESAD 204
Query: 97 SRKETRESAWRSPGWDECVAYTVPLIREMQSRILLPTSFSPTQ 139
SR R + P V +V + Q+ +L+PTSFSP +
Sbjct: 205 SRAAGRHKSHEDPRVVAAVRESVNYLVSQQNMLLIPTSFSPLK 247
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 39 IYEVRSYSLKPGTMIEWGNNWARAITHRRNNDEAFAGFFSQV--GRLYNVHHFWCYKDLA 96
YE RSY LKP M E+ N+ + H R G++S GR+ V H W Y + A
Sbjct: 36 FYEFRSYYLKPSKMNEFLENFEKN-AHLRTAHSELVGYWSVEFGGRMNTVFHIWKYDNFA 94
Query: 97 SRKETRESAWRSPGWDECVAYTVP---LIREMQSRI 129
R E R++ + W E + +P LI + +S I
Sbjct: 95 HRTEVRKALAKDKEWQE--QFLIPNLALIDKQESEI 128
>sp|Q9BS92|NPS3B_HUMAN Protein NipSnap homolog 3B OS=Homo sapiens GN=NIPSNAP3B PE=2 SV=1
Length = 247
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Query: 39 IYEVRSYSLKPGTMIEWGNNWARAITHRRN--NDEAFAGFFSQVGRLYNVHHFWCYKDLA 96
+YE+ + +KPG WG+ + RAI N + F ++ G L VH W +
Sbjct: 145 VYELAVFQMKPGGPALWGDAFERAINAHVNLGYTKVVGVFHTEYGELNRVHVLWWNESAD 204
Query: 97 SRKETRESAWRSPGWDECVAYTVPLIREMQSRILLPTSFSPTQ 139
SR R + P V +V + Q+ +L+P SFSP +
Sbjct: 205 SRAAGRHKSHEDPRVVAAVRESVNYLVSQQNMLLIPASFSPLK 247
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 40 YEVRSYSLKPGTMIEWGNNWARAITHRRNNDEAFAGFFSQV--GRLYNVHHFWCYKDLAS 97
YE R+Y LKP M + N + I H R + GF+S GR V H W Y + A
Sbjct: 37 YEFRTYYLKPSNMNAFMENLKKNI-HLRTSYSELVGFWSVEFGGRTNKVFHIWKYDNFAH 95
Query: 98 RKETRESAWRSPGWDE 113
R E R++ W E
Sbjct: 96 RAEVRKALANCKEWQE 111
>sp|P87237|YC0C_SCHPO Uncharacterized RING finger protein C4G3.12c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPCC4G3.12c PE=4 SV=1
Length = 821
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 58 NWARAITHRRNNDEAFAGFFSQVGRLYN-VHHFWCYKDLASRKETRESAWRS 108
N++ + TH+ D + F +Q GRL +HHF +DL S + R S RS
Sbjct: 599 NFSMSQTHQPTTDNT-SSFSTQPGRLSTGLHHFPSDRDLLSNQTRRSSLARS 649
>sp|C5B7N9|APAH_EDWI9 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical OS=Edwardsiella
ictaluri (strain 93-146) GN=apaH PE=3 SV=1
Length = 279
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 16 RHLQYLLAFSYWPAIETRSGAPNIYEVRSYSLKPGTM--IEWGNNWARAITHRRNNDEAF 73
R Y +AF +W ++E RS P +Y + + GT+ + W + + ++ RR + A
Sbjct: 218 REAGYSIAFGHWASLEGRSTPPQVYALDTGCCWGGTLTALRWEDRHSFSVPSRRASRHAK 277
Query: 74 A 74
A
Sbjct: 278 A 278
>sp|Q30TF9|SSRP_SULDN SsrA-binding protein OS=Sulfurimonas denitrificans (strain ATCC
33889 / DSM 1251) GN=smpB PE=3 SV=1
Length = 150
Score = 28.9 bits (63), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 71 EAFAGFFSQVGRLYNVHHFWCYKDLASRK 99
EAF F + +GRL HHF+ +++ SRK
Sbjct: 53 EAFL-FNAHIGRLETTHHFYAHEERGSRK 80
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.133 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,361,337
Number of Sequences: 539616
Number of extensions: 2041006
Number of successful extensions: 3643
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 3615
Number of HSP's gapped (non-prelim): 19
length of query: 139
length of database: 191,569,459
effective HSP length: 104
effective length of query: 35
effective length of database: 135,449,395
effective search space: 4740728825
effective search space used: 4740728825
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)