Query psy7458
Match_columns 139
No_of_seqs 102 out of 619
Neff 7.8
Searched_HMMs 29240
Date Fri Aug 16 18:50:24 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7458.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7458hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vqy_A Hypothetical protein AG 100.0 1.1E-34 3.8E-39 198.9 12.4 104 36-139 11-116 (116)
2 1vqs_A Hypothetical protein AG 100.0 1.1E-33 3.6E-38 194.0 12.0 103 36-138 11-115 (116)
3 3kkf_A Putative antibiotic bio 98.2 2.8E-05 9.5E-10 50.9 10.5 98 37-138 4-104 (105)
4 1x7v_A PA3566 protein, APC5058 97.8 0.0007 2.4E-08 43.1 11.8 92 37-132 5-97 (99)
5 1y0h_A Hypothetical protein RV 97.8 0.00039 1.3E-08 44.6 10.4 94 37-135 4-99 (102)
6 3f44_A Putative monooxygenase; 97.7 0.00037 1.3E-08 51.6 10.2 128 2-133 77-209 (220)
7 3e8o_A Uncharacterized protein 97.7 0.00039 1.3E-08 46.5 9.1 95 37-135 18-114 (119)
8 1tuv_A Protein YGIN; menadione 97.6 0.00094 3.2E-08 44.3 10.4 93 38-134 1-104 (114)
9 2bbe_A Hypothetical protein SO 97.6 0.00059 2E-08 44.6 9.0 92 37-132 12-105 (108)
10 1q8b_A Protein YJCS; structura 97.5 0.0012 4.2E-08 42.9 9.8 88 37-128 12-101 (105)
11 3mcs_A Putative monooxygenase; 97.5 0.00088 3E-08 49.7 9.6 125 2-132 77-204 (219)
12 2pd1_A Hypothetical protein; u 97.5 0.0016 5.3E-08 42.0 9.8 82 38-124 5-86 (104)
13 2gff_A LSRG protein; dimeric a 97.5 0.0014 4.9E-08 42.4 9.6 91 38-132 1-93 (106)
14 2omo_A DUF176; structural geno 97.5 0.0019 6.6E-08 43.4 10.4 93 35-131 20-114 (124)
15 2fb0_A Conserved hypothetical 97.4 0.0013 4.4E-08 41.5 8.7 84 37-124 3-87 (94)
16 3gz7_A Putative antibiotic bio 97.4 0.00094 3.2E-08 44.6 8.0 85 37-124 19-104 (115)
17 3bm7_A Protein of unknown func 97.4 0.0025 8.5E-08 42.2 10.1 91 37-131 19-112 (115)
18 4dpo_A Conserved protein; stru 97.4 0.0017 5.9E-08 43.4 9.3 91 37-131 24-116 (119)
19 1iuj_A Hypothetical protein TT 97.2 0.0037 1.3E-07 40.1 9.4 78 38-119 1-79 (106)
20 4hl9_A Antibiotic biosynthesis 97.2 0.0032 1.1E-07 42.2 8.9 94 36-133 21-116 (118)
21 4dn9_A Antibiotic biosynthesis 97.1 0.0046 1.6E-07 41.5 9.1 90 30-127 16-106 (122)
22 3kg0_A Snoab; polyketide, anth 96.9 0.028 9.5E-07 38.0 11.6 90 36-131 21-111 (128)
23 3f44_A Putative monooxygenase; 96.2 0.029 9.9E-07 41.3 8.8 92 37-132 5-98 (220)
24 3mcs_A Putative monooxygenase; 95.9 0.049 1.7E-06 40.2 8.7 87 37-127 5-93 (219)
25 2ril_A Antibiotic biosynthesis 95.9 0.1 3.5E-06 33.0 9.2 66 37-102 4-72 (99)
26 3hx9_A Protein RV3592; DI-heme 95.6 0.1 3.5E-06 35.1 8.7 65 38-102 2-67 (124)
27 1lq9_A Actva-ORF6 monooxygenas 95.1 0.1 3.4E-06 34.4 7.2 95 37-133 9-106 (112)
28 1tz0_A Hypothetical protein; s 95.1 0.18 6E-06 33.1 8.3 74 37-115 6-82 (114)
29 3tvz_A Putative uncharacterize 94.8 0.15 5.3E-06 36.0 7.8 75 36-116 69-145 (172)
30 1sqe_A Hypothetical protein PG 94.6 0.14 4.9E-06 32.9 6.8 72 37-113 1-75 (109)
31 2zdo_A Heme-degrading monooxyg 94.5 0.21 7E-06 32.1 7.4 73 38-115 4-79 (109)
32 3fgv_A Uncharacterized protein 91.9 1.7 5.7E-05 28.2 8.8 82 38-123 14-95 (106)
33 3fj2_A Monooxygenase-like prot 87.9 5.8 0.0002 28.3 10.3 75 37-115 84-158 (186)
34 1tuw_A Tetracenomycin polyketi 85.2 3.9 0.00013 26.9 6.6 79 38-123 2-84 (109)
35 2fiu_A Conserved hypothetical 83.5 4.5 0.00015 25.7 6.3 70 40-115 7-80 (99)
36 2okq_A Hypothetical protein YB 82.4 6.2 0.00021 27.0 6.9 76 39-114 27-119 (141)
37 1x8d_A Hypothetical protein YI 81.9 5 0.00017 25.9 6.1 68 44-117 7-82 (104)
38 2pgc_A Uncharacterized protein 73.3 22 0.00074 25.2 11.3 80 37-116 113-194 (207)
39 3hhl_A RPA0582; alpha-beta-bar 69.1 24 0.00081 23.9 9.6 45 68-116 65-115 (143)
40 3hf5_A 4-methylmuconolactone m 66.8 23 0.0008 23.0 9.1 88 37-129 9-111 (116)
41 2qlw_A RHAU; mutarotase, isome 58.9 10 0.00034 26.1 3.6 67 44-116 47-121 (144)
42 3lo3_A Uncharacterized conserv 56.9 32 0.0011 21.3 6.7 61 49-115 16-79 (94)
43 4ae5_A Signal transduction pro 35.7 1.1E+02 0.0037 21.2 8.6 63 37-101 65-129 (167)
44 2qyc_A Ferredoxin-like protein 29.2 1E+02 0.0035 18.9 10.3 86 37-126 3-93 (103)
45 1tr0_A Stable protein 1; plant 26.9 1.2E+02 0.004 18.8 9.0 84 37-124 7-99 (108)
46 3bgu_A Ferredoxin-like protein 25.3 1.3E+02 0.0046 19.0 8.7 87 34-124 17-108 (116)
47 1q4r_A Protein AT3G17210; cent 23.3 1.4E+02 0.0049 18.6 8.3 84 37-124 9-99 (112)
48 2cb2_A Sulfur oxygenase reduct 21.4 2.8E+02 0.0094 21.2 12.1 79 37-115 158-277 (318)
49 2jdj_A HAPK, REDY-like protein 20.3 1.8E+02 0.0062 18.6 8.9 85 41-129 4-97 (105)
No 1
>1vqy_A Hypothetical protein AGR_PAT_315; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.40A {Agrobacterium tumefaciens str} SCOP: d.58.4.13
Probab=100.00 E-value=1.1e-34 Score=198.92 Aligned_cols=104 Identities=30% Similarity=0.470 Sum_probs=99.0
Q ss_pred CCceEEEEEEEecCCCHHHHHHHHHH-HhHhhhhc-CceeEEEEeeeCCcceEEEEEEcCCHHHHHHHHHHhccCCChhh
Q psy7458 36 APNIYEVRSYSLKPGTMIEWGNNWAR-AITHRRNN-DEAFAGFFSQVGRLYNVHHFWCYKDLASRKETRESAWRSPGWDE 113 (139)
Q Consensus 36 ~~~iyElRtY~lkpg~~~~~~~~~~~-~l~~~~~~-~~lvG~w~te~G~~n~v~~lw~y~~~~~r~~~r~~~~~~~~w~~ 113 (139)
.-||||+|+|+++||++++|++.|++ +++.+.++ +++||+|++++|++|+|+|||+|+|+++|++.|+++++||+|++
T Consensus 11 ~~~~yElRtY~i~Pg~~~~f~~~~~~~~i~~~~k~g~~~vG~~~~~~G~ln~v~~Lw~y~sl~~r~~~r~a~~~dp~W~~ 90 (116)
T 1vqy_A 11 HHMIVEERIYRIRGGKMQEYLKLVREEGIAIQAPILGNLIGYFVTDIGPLSQVIHMWGYASLDDRAERRGKLAEDQRWQA 90 (116)
T ss_dssp -CCEEEEEEEEECTTCHHHHHHHHHHTHHHHHHHHHCCEEEEEEEEESBSSEEEEEEEESCHHHHHHHHHHHHTCHHHHH
T ss_pred ceeEEEEEEEEEcCCCHHHHHHHHHHhhhHHHHHhCCceEEEEEcccCCCcEEEEEEecCCHHHHHHHHHHHhcCCchHH
Confidence 36999999999999999999999999 99998766 79999999999999999999999999999999999999999999
Q ss_pred hhhcccccceeeeeeeeeecCCCCCC
Q psy7458 114 CVAYTVPLIREMQSRILLPTSFSPTQ 139 (139)
Q Consensus 114 ~~~~~~~~i~~~~s~ll~p~~fsp~~ 139 (139)
++....++|.+++|++|.|++|||++
T Consensus 91 ~~~~~~~lI~~~es~il~P~~fSpl~ 116 (116)
T 1vqy_A 91 FIPRLSVLIESSENRILLPTDFSPLR 116 (116)
T ss_dssp HHHHHHTTEEEEEEEEEEECTTCSCC
T ss_pred HHHHhhcceeeEEEEEEEECCCCCCC
Confidence 88888899999999999999999986
No 2
>1vqs_A Hypothetical protein AGR_L_1239; ferredoxin-like fold, structural genomics, joint center for structural genomics, JCSG; HET: MSE SO4; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.4.13 PDB: 2ap6_A
Probab=100.00 E-value=1.1e-33 Score=194.04 Aligned_cols=103 Identities=27% Similarity=0.536 Sum_probs=98.7
Q ss_pred CCceEEEEEEEecCCCHHHHHHHHHH-HhHhhhhc-CceeEEEEeeeCCcceEEEEEEcCCHHHHHHHHHHhccCCChhh
Q psy7458 36 APNIYEVRSYSLKPGTMIEWGNNWAR-AITHRRNN-DEAFAGFFSQVGRLYNVHHFWCYKDLASRKETRESAWRSPGWDE 113 (139)
Q Consensus 36 ~~~iyElRtY~lkpg~~~~~~~~~~~-~l~~~~~~-~~lvG~w~te~G~~n~v~~lw~y~~~~~r~~~r~~~~~~~~w~~ 113 (139)
.-|+||+|+|+++||++++|++.|++ +++.+.++ +++||+|++++|++|+|+|||+|+|+++|++.|+++++||+|++
T Consensus 11 ~~~~yElR~Y~i~Pg~~~~~~~~~~~~~i~~~~~~g~~~vG~~~~~~G~ln~v~~Lw~y~sl~~r~~~r~a~~~dp~W~~ 90 (116)
T 1vqs_A 11 HHMFYEIRTYRLKNGAIPAYLKVVEDEGIEIQKSHLGELVGYFFSEIGPINEIVHIWAFSSLDDRAERRARLMADPRWLS 90 (116)
T ss_dssp SCCEEEEEEEEESTTCHHHHHHHHHHTHHHHHHHHHCCEEEEEEEEESSSSEEEEEEEESCHHHHHHHHHHHHHCHHHHH
T ss_pred ceeEEEEEEEEEcCCCHHHHHHHHHHhhhHHHHHhCCceEEEEEcccCCCcEEEEEEecCCHHHHHHHHHHHhcCCchHH
Confidence 46999999999999999999999999 99998766 79999999999999999999999999999999999999999999
Q ss_pred hhhcccccceeeeeeeeeecCCCCC
Q psy7458 114 CVAYTVPLIREMQSRILLPTSFSPT 138 (139)
Q Consensus 114 ~~~~~~~~i~~~~s~ll~p~~fsp~ 138 (139)
+....+++|.+++|++|.|++|||+
T Consensus 91 ~~~~~~~lI~~~es~il~P~~fSpl 115 (116)
T 1vqs_A 91 FLPKIRDLIEVAENKIMKPARFSPL 115 (116)
T ss_dssp HTHHHHTTEEEEEEEEEEECTTCSC
T ss_pred HHHHhhhheeeeEEEEEEECCCCcC
Confidence 8888889999999999999999997
No 3
>3kkf_A Putative antibiotic biosynthesis monooxygenase; structural genomics, joint center for structural genomics, JCSG; HET: MSE P6G; 1.30A {Bacteroides thetaiotaomicron}
Probab=98.19 E-value=2.8e-05 Score=50.91 Aligned_cols=98 Identities=14% Similarity=0.120 Sum_probs=77.5
Q ss_pred CceEEEEEEEecCCCHHHHHHHHHHHhH-h-hhhcCceeEEEEeeeCCcceEEEEEEcCCHHHHHHHHHHhccCCChhhh
Q psy7458 37 PNIYEVRSYSLKPGTMIEWGNNWARAIT-H-RRNNDEAFAGFFSQVGRLYNVHHFWCYKDLASRKETRESAWRSPGWDEC 114 (139)
Q Consensus 37 ~~iyElRtY~lkpg~~~~~~~~~~~~l~-~-~~~~~~lvG~w~te~G~~n~v~~lw~y~~~~~r~~~r~~~~~~~~w~~~ 114 (139)
.||+.+-+.+++||+.++|.+.+.+.+. . +..-|-+--.+....++.++++.+=.|+|.++.++. .+.|.++++
T Consensus 4 ~mi~via~~~vkpg~~~~f~~~l~~~~~~s~r~EpGcl~y~~~~~~~~p~~~~~~E~w~d~~a~~~H----~~s~~~~~~ 79 (105)
T 3kkf_A 4 NNMVRLSRIIIDPERLEEYNAYLKEEIEVSMRLEPGVLVLYAVAEKERPNHVTILEIYADEAAYKSH----IATPHFKKY 79 (105)
T ss_dssp GCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHHCTTEEEEEEEECSSCTTEEEEEEEESSHHHHHHH----HTSHHHHHH
T ss_pred CCEEEEEEEEECcCcHHHHHHHHHHHHHHHHhCCCCcEEEEEEEeCCCCCEEEEEEEECCHHHHHHH----hcCHHHHHH
Confidence 6899999999999999999999998764 3 434444433344455567899999999999987665 589999999
Q ss_pred hhcccccceeeeeeeeeec-CCCCC
Q psy7458 115 VAYTVPLIREMQSRILLPT-SFSPT 138 (139)
Q Consensus 115 ~~~~~~~i~~~~s~ll~p~-~fsp~ 138 (139)
.....+++.+.+-..|.|. +.+++
T Consensus 80 ~~~~~~~l~~~~~~~l~pi~~~~~~ 104 (105)
T 3kkf_A 80 KEGTLDMVQMLELIDATPLIPGLKM 104 (105)
T ss_dssp HHHHGGGEEEEEEEEECCSSTTCCC
T ss_pred HHHHHHHhhCcceEEEeecCccccc
Confidence 8889999999998888885 44544
No 4
>1x7v_A PA3566 protein, APC5058; structural genomics, protein structure initiative, midwest center for structural genomics, alpha-beta plait, PSI; 1.78A {Pseudomonas aeruginosa} SCOP: d.58.4.11
Probab=97.82 E-value=0.0007 Score=43.13 Aligned_cols=92 Identities=8% Similarity=0.010 Sum_probs=67.4
Q ss_pred CceEEEEEEEecCCCHHHHHHHHHHHhHhhhhcCceeEEEE-eeeCCcceEEEEEEcCCHHHHHHHHHHhccCCChhhhh
Q psy7458 37 PNIYEVRSYSLKPGTMIEWGNNWARAITHRRNNDEAFAGFF-SQVGRLYNVHHFWCYKDLASRKETRESAWRSPGWDECV 115 (139)
Q Consensus 37 ~~iyElRtY~lkpg~~~~~~~~~~~~l~~~~~~~~lvG~w~-te~G~~n~v~~lw~y~~~~~r~~~r~~~~~~~~w~~~~ 115 (139)
.||.-+-+++++||+.++|.+.+.+.+..-...-..+++-. ...++.++++.+=.|+|.++.++. .++|.++++.
T Consensus 5 ~mi~v~~~~~vkpg~~~~~~~~~~~~~~~~~~epG~l~~~~~~~~~~p~~~~~~e~w~~~~a~~~h----~~s~~~~~~~ 80 (99)
T 1x7v_A 5 TPLTLIATITAAPGHAEALERELRALVAPSRAEAGCLQYDLHQDRHDSHLFYMIEQWRDDAALERH----QNTEHFLRFS 80 (99)
T ss_dssp SCEEEEEEEEECTTCHHHHHHHHHHHHHHHHHSTTEEEEEEEECSSCTTEEEEEEEESSHHHHHHH----HTSHHHHHHH
T ss_pred CcEEEEEEEEECCCCHHHHHHHHHHHHHHHhCCCCceEEEEEecCCCCCEEEEEEEECCHHHHHHH----hcCHHHHHHH
Confidence 47999999999999999999999986544223333444443 344557899999999999887765 4788888888
Q ss_pred hcccccceeeeeeeeee
Q psy7458 116 AYTVPLIREMQSRILLP 132 (139)
Q Consensus 116 ~~~~~~i~~~~s~ll~p 132 (139)
....+++...+-..+.+
T Consensus 81 ~~~~~~~~~~~v~~~~~ 97 (99)
T 1x7v_A 81 RGNEALLQNVKIDQLYR 97 (99)
T ss_dssp TTCGGGEEEEEEEEEEC
T ss_pred HHHHHhcCCceEEEEEe
Confidence 77777755555555544
No 5
>1y0h_A Hypothetical protein RV0793; ferredoxin-like fold, alpha+beta sandwich with antiparallel sheet, structural genomics, PSI; 1.60A {Mycobacterium tuberculosis} SCOP: d.58.4.11
Probab=97.80 E-value=0.00039 Score=44.63 Aligned_cols=94 Identities=14% Similarity=0.120 Sum_probs=69.3
Q ss_pred CceEEEEEEEecCCCHHHHHHHHHHHhHh-hhhcCceeEEEEeeeCCcceEEEEEEcCCHHHHHHHHHHhccCCChhhhh
Q psy7458 37 PNIYEVRSYSLKPGTMIEWGNNWARAITH-RRNNDEAFAGFFSQVGRLYNVHHFWCYKDLASRKETRESAWRSPGWDECV 115 (139)
Q Consensus 37 ~~iyElRtY~lkpg~~~~~~~~~~~~l~~-~~~~~~lvG~w~te~G~~n~v~~lw~y~~~~~r~~~r~~~~~~~~w~~~~ 115 (139)
.||.-+-+++++||+.++|.+.+.+.+.. +..-|-+-..+... ++.++++.+=.|+|.++.++. .++|.++++.
T Consensus 4 ~mi~v~~~~~vkpg~~~~~~~~~~~~~~~~~~epG~l~~~~~~~-~~~~~~~~~e~w~~~~a~~~h----~~s~~~~~~~ 78 (102)
T 1y0h_A 4 SPVAVIARFMPRPDARSALRALLDAMITPTRAEDGCRSYDLYES-ADGGELVLFERYRSRIALDEH----RGSPHYLNYR 78 (102)
T ss_dssp SCEEEEEEECBCGGGHHHHHHHHHHHHHHHHHSTTEEEEEEEEE-TTSSCEEEEEEESSHHHHHHH----HTSHHHHHHH
T ss_pred ceEEEEEEEEECCCcHHHHHHHHHHHHHHHhcCCCcEEEEEEEe-CCCCEEEEEEEECCHHHHHHH----hcChHHHHHH
Confidence 47999999999999999999999986544 33334333333334 667899999999999987765 4788888888
Q ss_pred hccccccee-eeeeeeeecCC
Q psy7458 116 AYTVPLIRE-MQSRILLPTSF 135 (139)
Q Consensus 116 ~~~~~~i~~-~~s~ll~p~~f 135 (139)
....+++.+ .+-..+.+..-
T Consensus 79 ~~~~~~l~~~~~i~~~~~~~~ 99 (102)
T 1y0h_A 79 AQVGELLTRPVAVTVLAPLDE 99 (102)
T ss_dssp TTSGGGBSSCCEEEEEEEEEC
T ss_pred HHHHHHhcCCcEEEEEEEcCC
Confidence 777777765 45555655443
No 6
>3f44_A Putative monooxygenase; YP_193413.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.55A {Lactobacillus acidophilus ncfm}
Probab=97.70 E-value=0.00037 Score=51.64 Aligned_cols=128 Identities=6% Similarity=0.011 Sum_probs=86.2
Q ss_pred hHHhHHHhcCcccccccceecc-c--CCCCcccCCCCCCceEEEEEEEecCCCHHHHHHHHH-HHhHh-hhhcCceeEEE
Q psy7458 2 FQVLHKEQGQTVRSRHLQYLLA-F--SYWPAIETRSGAPNIYEVRSYSLKPGTMIEWGNNWA-RAITH-RRNNDEAFAGF 76 (139)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~iyElRtY~lkpg~~~~~~~~~~-~~l~~-~~~~~~lvG~w 76 (139)
++.|......++.......+.+ + .--++......+.||+.+-+.+++||+.++|.+.+. ..... +..-|-+.-.+
T Consensus 77 ~~~~~~~~~~~l~~~~~~~l~p~~l~~k~~~~~~~~~~~mI~~ia~~~vkpg~~~~f~~~l~~~~~~~~r~EpGcl~y~~ 156 (220)
T 3f44_A 77 ADDFVETVNKIATKQKVIDLHPEVITTKAQRALNSYADNFVMRLIKVEVKDADAEKFSHAVKKEMTTSMASEPGMEIMMS 156 (220)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEEEEECCC-------CCCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHHCTTEEEEEE
T ss_pred HHHHHHHHHHHhhCCceeeeeeEEeecchhhhhhcCCCceEEEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 4567777777777654322221 1 111233344446899999999999999999999995 55544 43334443333
Q ss_pred EeeeCCcceEEEEEEcCCHHHHHHHHHHhccCCChhhhhhcccccceeeeeeeeeec
Q psy7458 77 FSQVGRLYNVHHFWCYKDLASRKETRESAWRSPGWDECVAYTVPLIREMQSRILLPT 133 (139)
Q Consensus 77 ~te~G~~n~v~~lw~y~~~~~r~~~r~~~~~~~~w~~~~~~~~~~i~~~~s~ll~p~ 133 (139)
....++.|+++.+=.|+|.++.++. .+.|.++++.....+++.+.+...|.|-
T Consensus 157 ~~d~~~p~~f~~~E~w~d~~Al~aH----~~s~hf~~~~~~~~~ll~~~~v~~l~p~ 209 (220)
T 3f44_A 157 GTNIDNPNEWYFIEVYANDEAYDIH----VKTPHYKEYIEETDGMVKSRDVKTLVRD 209 (220)
T ss_dssp EEETTEEEEEEEEEEESSHHHHHHH----TTSHHHHHHHHHTTTTEEEEEEEEEEEE
T ss_pred EEcCCCCCEEEEEEEECCHHHHHHH----hcCHHHHHHHHHHHHHhcCCceEEeech
Confidence 3445557889888899999887665 6899999998888999998888877763
No 7
>3e8o_A Uncharacterized protein with erredoxin-like fold; putative antibiotic biosynthesis monooxygenase; HET: MSE; 1.40A {Deinococcus radiodurans}
Probab=97.67 E-value=0.00039 Score=46.48 Aligned_cols=95 Identities=6% Similarity=0.005 Sum_probs=69.6
Q ss_pred CceEEEEEEEecCCCHHHHHHHHHHHhHh-hhhcCceeEEEEeeeCCcceEEEEEEcCCHHHHHHHHHHhccCCChhhhh
Q psy7458 37 PNIYEVRSYSLKPGTMIEWGNNWARAITH-RRNNDEAFAGFFSQVGRLYNVHHFWCYKDLASRKETRESAWRSPGWDECV 115 (139)
Q Consensus 37 ~~iyElRtY~lkpg~~~~~~~~~~~~l~~-~~~~~~lvG~w~te~G~~n~v~~lw~y~~~~~r~~~r~~~~~~~~w~~~~ 115 (139)
.||.-+-+++++||+.++|.+.+.+.+.. +..-|-+--.+....++.++++-+=.|+|.++.++. .+.|.++++.
T Consensus 18 ~mi~via~~~vkpg~~~~~~~~l~~~~~~~r~EpGcl~y~l~~~~~dp~~f~~~E~W~d~ea~~aH----~~s~~~~~~~ 93 (119)
T 3e8o_A 18 TMVISHGTLSASAEHAAHLRQLLVHIAQATRQEDGCLLYLVSEDLSQPGHFLITEHWDNLGAMHTH----LALPGVTQAI 93 (119)
T ss_dssp CCEEEEEEEECCTTTHHHHHHHHHHHHHHHTTSTTEEEEEEEEETTSTTEEEEEEEESSHHHHHHH----HTCHHHHHHH
T ss_pred ceEEEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCcEEEEEEEcCCCCCEEEEEEEECCHHHHHHH----HcCHHHHHHH
Confidence 79999999999999999999999986654 433343333333344567899999999999988765 4889888888
Q ss_pred hccccc-ceeeeeeeeeecCC
Q psy7458 116 AYTVPL-IREMQSRILLPTSF 135 (139)
Q Consensus 116 ~~~~~~-i~~~~s~ll~p~~f 135 (139)
....++ ....+-.++.+...
T Consensus 94 ~~~~~ll~~~~~i~~~~~~~~ 114 (119)
T 3e8o_A 94 DALKHLNVTDLKITAYEAGEA 114 (119)
T ss_dssp HHHHHTTCCCCEEEEEEBCSC
T ss_pred HHHHHHhcCCCEEEEEecccc
Confidence 777676 34555555555443
No 8
>1tuv_A Protein YGIN; menadione oxidase, monooxygenase, CO-crystal with natural PR ferredoxin fold, unknown function; HET: VK3; 1.70A {Escherichia coli} SCOP: d.58.4.11 PDB: 1r6y_A
Probab=97.63 E-value=0.00094 Score=44.26 Aligned_cols=93 Identities=12% Similarity=0.079 Sum_probs=69.2
Q ss_pred ceEEEEEEEecCC--CHHHHHHHHHHHhHhhhhcCceeEEEEe-e--------eCCcceEEEEEEcCCHHHHHHHHHHhc
Q psy7458 38 NIYEVRSYSLKPG--TMIEWGNNWARAITHRRNNDEAFAGFFS-Q--------VGRLYNVHHFWCYKDLASRKETRESAW 106 (139)
Q Consensus 38 ~iyElRtY~lkpg--~~~~~~~~~~~~l~~~~~~~~lvG~w~t-e--------~G~~n~v~~lw~y~~~~~r~~~r~~~~ 106 (139)
||.-+-+.+++|| +.++|.+.+.+.+..-...-..+++-.. . .++.|+++-+=.|+|.++.++. .
T Consensus 1 Mi~via~~~vkpg~~~~~~f~~~l~~~~~~~r~EpGcl~y~~~~~~~~~~~~~~~~p~~~~~~E~W~d~~al~aH----~ 76 (114)
T 1tuv_A 1 MLTVIAEIRTRPGQHHRQAVLDQFAKIVPTVLKEEGCHGYAPMVDCAAGVSFQSMAPDSIVMIEQWESIAHLEAH----L 76 (114)
T ss_dssp CEEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSTTEEEEEEECCCCCCCTTCCCCTTEEEEEEEESCHHHHHHH----H
T ss_pred CEEEEEEEEECCCcchHHHHHHHHHHHHHHHccCCCcEEEEEEecccccccccCCCCCEEEEEEEECCHHHHHHH----h
Confidence 6788889999999 9999999999866542233344445443 3 3567899999999999887765 4
Q ss_pred cCCChhhhhhcccccceeeeeeeeeecC
Q psy7458 107 RSPGWDECVAYTVPLIREMQSRILLPTS 134 (139)
Q Consensus 107 ~~~~w~~~~~~~~~~i~~~~s~ll~p~~ 134 (139)
+.|.++++.+...+++...+-.++.+.+
T Consensus 77 ~s~h~~~~~~~~~~l~~~~~i~~~~~~~ 104 (114)
T 1tuv_A 77 QTPHMKAYSEAVKGDVLEMNIRILQPGI 104 (114)
T ss_dssp TSHHHHHHHHHHTTTEEEEEEEEECCC-
T ss_pred cCHHHHHHHHHHHHhccCCEEEEEEEcc
Confidence 7888888888788888877666666554
No 9
>2bbe_A Hypothetical protein SO0527; MCSG, structural genomics, PSI, protein structure in midwest center for structural genomics; 1.97A {Shewanella oneidensis}
Probab=97.60 E-value=0.00059 Score=44.55 Aligned_cols=92 Identities=14% Similarity=0.034 Sum_probs=67.5
Q ss_pred CceEEEEEEEecCCCHHHHHHHHHHHhHhhhhcCceeEEE-EeeeCCcceEEEEEEcCCHHHHHHHHHHhccCCChhh-h
Q psy7458 37 PNIYEVRSYSLKPGTMIEWGNNWARAITHRRNNDEAFAGF-FSQVGRLYNVHHFWCYKDLASRKETRESAWRSPGWDE-C 114 (139)
Q Consensus 37 ~~iyElRtY~lkpg~~~~~~~~~~~~l~~~~~~~~lvG~w-~te~G~~n~v~~lw~y~~~~~r~~~r~~~~~~~~w~~-~ 114 (139)
.||.-+-+++++||+.++|.+.+.+.+..-...-..+++- ....++.++++.+=.|+|.++.++. .++|.+++ +
T Consensus 12 ~mi~v~~~~~vkpg~~~~f~~~~~~~~~~~~~epGcl~~~~~~~~~~p~~~~~~E~w~~~~a~~~H----~~s~~~~~~~ 87 (108)
T 2bbe_A 12 QQIVCVASFLSKEGKTEALIAALASLIPDTRREAGCIRYELNVSRDEPRRVTFVEKFVDIAAFDEH----CAKDAIQHYF 87 (108)
T ss_dssp SSEEEEEEEEECTTCHHHHHHHHHTTHHHHHTSTTEEEEEEEECSSSTTEEEEEEEESSHHHHHHH----HTSHHHHHHH
T ss_pred cEEEEEEEEEECCCcHHHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCEEEEEEEECCHHHHHHH----hcChHHHHHH
Confidence 3699999999999999999999988554322333444443 3344567899999999999987765 47888888 8
Q ss_pred hhcccccceeeeeeeeee
Q psy7458 115 VAYTVPLIREMQSRILLP 132 (139)
Q Consensus 115 ~~~~~~~i~~~~s~ll~p 132 (139)
.....+++.+.+-..+.+
T Consensus 88 ~~~~~~~l~~~~v~~~~~ 105 (108)
T 2bbe_A 88 HQVMPELVESFHVETYHQ 105 (108)
T ss_dssp HHTHHHHEEEEEEEEECC
T ss_pred HHHHHHhccccEEEEEEE
Confidence 877777877755554444
No 10
>1q8b_A Protein YJCS; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG, unknown function; 1.90A {Bacillus subtilis} SCOP: d.58.4.6
Probab=97.53 E-value=0.0012 Score=42.91 Aligned_cols=88 Identities=3% Similarity=-0.047 Sum_probs=68.0
Q ss_pred CceEEEEEEEecCCC-HHHHHHHHHHHhHhhhhcCceeEEEEe-eeCCcceEEEEEEcCCHHHHHHHHHHhccCCChhhh
Q psy7458 37 PNIYEVRSYSLKPGT-MIEWGNNWARAITHRRNNDEAFAGFFS-QVGRLYNVHHFWCYKDLASRKETRESAWRSPGWDEC 114 (139)
Q Consensus 37 ~~iyElRtY~lkpg~-~~~~~~~~~~~l~~~~~~~~lvG~w~t-e~G~~n~v~~lw~y~~~~~r~~~r~~~~~~~~w~~~ 114 (139)
.||.-+-+++++||+ .++|.+.+.+.+..-...-..+++-.. ..++.++++.+=.|+|.++.++. .+.|.++++
T Consensus 12 ~mi~vi~~~~vkpg~d~~~f~~~l~~~~~~~r~epGcl~~~~~~~~~~p~~~~~~E~w~d~~a~~~H----~~s~~~~~~ 87 (105)
T 1q8b_A 12 SMHYITACLKIISDKDLNEIMKEFKKLEEETNKEEGCITFHAYPLEPSERKIMLWEIWENEEAVKIH----FTKKHTIDV 87 (105)
T ss_dssp CEEEEEEEEEECCCSCHHHHHHHHHHHHHHHTTSTTEEEEEEEECCGGGCEEEEEEEESSHHHHHHH----TTSHHHHHH
T ss_pred eEEEEEEEEEECCCCcHHHHHHHHHHHHHHHhcCCCcEEEEEEEcCCCCCEEEEEEEECCHHHHHHH----hcCHHHHHH
Confidence 479999999999999 999999999866542233344455444 44567899999999999987766 578999999
Q ss_pred hhcccccceeeeee
Q psy7458 115 VAYTVPLIREMQSR 128 (139)
Q Consensus 115 ~~~~~~~i~~~~s~ 128 (139)
.....+++.+.+..
T Consensus 88 ~~~~~~~l~~~e~~ 101 (105)
T 1q8b_A 88 QKQELTEVEWLMKS 101 (105)
T ss_dssp HTTTCEEEEEEEEE
T ss_pred HHHHHHHhhChhhh
Confidence 88888888877654
No 11
>3mcs_A Putative monooxygenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.55A {Fusobacterium nucleatum subsp}
Probab=97.49 E-value=0.00088 Score=49.73 Aligned_cols=125 Identities=10% Similarity=0.022 Sum_probs=91.7
Q ss_pred hHHhHHHhcCccccccc--ceecccCCCCcccCCCCCCceEEEEEEEecCCCHHHHHHHHHHHh-HhhhhcCceeEEEEe
Q psy7458 2 FQVLHKEQGQTVRSRHL--QYLLAFSYWPAIETRSGAPNIYEVRSYSLKPGTMIEWGNNWARAI-THRRNNDEAFAGFFS 78 (139)
Q Consensus 2 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~iyElRtY~lkpg~~~~~~~~~~~~l-~~~~~~~~lvG~w~t 78 (139)
++.|......++.++.. ++-..+. -.+..... +.++.-+-+.++|||+.++|.+...+.+ +.|..-|-+.-.+..
T Consensus 77 f~~f~~~~~~~l~~~~~~~~~~~~~~-~~k~~~~~-~~~~~via~~~vkp~~~e~~~~~~~~~~~~sr~E~Gcl~y~~~~ 154 (219)
T 3mcs_A 77 SKDFKAVIPQIAEGNLNSAEIDVQIA-KDKKIEQN-DNTFAVYTVIDVKPENDKEFAEIIKNIVETTFNEEGTLLVYLGT 154 (219)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEEEE-EECCCCCC-TTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSTTEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCcccceeeEEec-ccccccCC-CCcEEEEEEEEECcCcHHHHHHHHHHHHHHHcCCCCeEEEEEEe
Confidence 56788888888887654 2222221 11111222 3577789999999999999999998855 456444555555566
Q ss_pred eeCCcceEEEEEEcCCHHHHHHHHHHhccCCChhhhhhcccccceeeeeeeeee
Q psy7458 79 QVGRLYNVHHFWCYKDLASRKETRESAWRSPGWDECVAYTVPLIREMQSRILLP 132 (139)
Q Consensus 79 e~G~~n~v~~lw~y~~~~~r~~~r~~~~~~~~w~~~~~~~~~~i~~~~s~ll~p 132 (139)
..++.|+++-+=.|.|.++.++. .+.|-++++.....+++.+.....|.|
T Consensus 155 ~~~~p~~f~~~E~w~d~~A~~aH----~~s~Hf~~~~~~~~~~l~~~~~~~l~~ 204 (219)
T 3mcs_A 155 DRRNFNKWCLFEVYKDIDSYLNH----RSAKYFKDYITQTKDMIAGKKRAELQV 204 (219)
T ss_dssp ETTEEEEEEEEEEESSHHHHHHH----HTSHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred cCCCCCEEEEEEEECCHHHHHHH----hcCHHHHHHHHHHHHHHhCCceeeccc
Confidence 66668899999999999998877 489999999988889999888887776
No 12
>2pd1_A Hypothetical protein; unknown function, NE2512 protein, structural genomics, APC72 2, protein structure initiative; 1.86A {Nitrosomonas europaea} SCOP: d.58.4.11
Probab=97.49 E-value=0.0016 Score=41.96 Aligned_cols=82 Identities=16% Similarity=0.102 Sum_probs=61.0
Q ss_pred ceEEEEEEEecCCCHHHHHHHHHHHhHhhhhcCceeEEEEeeeCCcceEEEEEEcCCHHHHHHHHHHhccCCChhhhhhc
Q psy7458 38 NIYEVRSYSLKPGTMIEWGNNWARAITHRRNNDEAFAGFFSQVGRLYNVHHFWCYKDLASRKETRESAWRSPGWDECVAY 117 (139)
Q Consensus 38 ~iyElRtY~lkpg~~~~~~~~~~~~l~~~~~~~~lvG~w~te~G~~n~v~~lw~y~~~~~r~~~r~~~~~~~~w~~~~~~ 117 (139)
||.-+-+++++||+.++|.+.+.+.+..-...-..+++-.... +.++++.+=.|+|.++.++. .+.|.++++...
T Consensus 5 ~i~v~~~~~vkpg~~~~~~~~l~~~~~~~~~epG~l~~~~~~~-~p~~~~~~E~w~~~~a~~~H----~~s~~~~~~~~~ 79 (104)
T 2pd1_A 5 KLALFVRLEAKPGQEAALADFLASALPLANAESGTTAWFALKF-GPSTFGVFDAFADEAGRQAH----LNGQIAAALMAN 79 (104)
T ss_dssp CEEEEEEEEBCTTCHHHHHHHHHHTHHHHHTCTTEEEEEEEEC-SSSEEEEEEEESSHHHHHHH----HTSHHHHHHHHH
T ss_pred EEEEEEEEEeCCCCHHHHHHHHHHHHHHHhCCCCcEEEEEEec-CCCEEEEEEEECCHHHHHHH----hCCHHHHHHHHH
Confidence 6888999999999999999999986543223334445544444 66899999999999987765 478888887766
Q ss_pred cccccee
Q psy7458 118 TVPLIRE 124 (139)
Q Consensus 118 ~~~~i~~ 124 (139)
..+++.+
T Consensus 80 ~~~ll~~ 86 (104)
T 2pd1_A 80 AATLLSS 86 (104)
T ss_dssp HHHHBSS
T ss_pred HHHHhcC
Confidence 6666554
No 13
>2gff_A LSRG protein; dimeric alpha+beta barrel ferredoxin fold, sugar binding protein; 1.75A {Yersinia pestis} PDB: 3qmq_A
Probab=97.48 E-value=0.0014 Score=42.44 Aligned_cols=91 Identities=10% Similarity=0.067 Sum_probs=65.9
Q ss_pred ceEEEEEEEecCCCHHHHHHHHHHHhHhhhhcCceeEEE-EeeeCCcceEEEEEEcCCHHHHHHHHHHhccCCChhhhhh
Q psy7458 38 NIYEVRSYSLKPGTMIEWGNNWARAITHRRNNDEAFAGF-FSQVGRLYNVHHFWCYKDLASRKETRESAWRSPGWDECVA 116 (139)
Q Consensus 38 ~iyElRtY~lkpg~~~~~~~~~~~~l~~~~~~~~lvG~w-~te~G~~n~v~~lw~y~~~~~r~~~r~~~~~~~~w~~~~~ 116 (139)
||.-+-+++++||+.++|.+.+.+.+..-...-..+++- ....++.|+++.+=.|+|.++.++. .+.|.++++.+
T Consensus 1 Mi~vi~~~~vkpg~~~~~~~~~~~~~~~~r~epG~l~~~~~~~~~~p~~~~~~E~w~d~~a~~~h----~~s~~~~~~~~ 76 (106)
T 2gff_A 1 MHVTLVEINVKEDKVDQFIEVFRANHLGSIREAGNLRFDVLRDEHIPTRFYIYEAYTDEAAVAIH----KTTPHYLQCVE 76 (106)
T ss_dssp CEEEEEEEEBCGGGHHHHHHHHHHHHHHHHTSTTEEEEEEEEESSCTTEEEEEEEESSHHHHHHH----TTSHHHHHHHH
T ss_pred CEEEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCCCEEEEEEEECCHHHHHHH----hcCHHHHHHHH
Confidence 678888999999999999999998664323333344444 3344567899999999999887654 68888888887
Q ss_pred ccccccee-eeeeeeee
Q psy7458 117 YTVPLIRE-MQSRILLP 132 (139)
Q Consensus 117 ~~~~~i~~-~~s~ll~p 132 (139)
...+++.+ .+-.++.+
T Consensus 77 ~~~~~l~~~~~i~~~~~ 93 (106)
T 2gff_A 77 QLAPLMTGPRKKTVFIG 93 (106)
T ss_dssp HHGGGBSSCCEEEEEEE
T ss_pred HHHHHhcCCcEEEEEee
Confidence 77777654 44455544
No 14
>2omo_A DUF176; structural genomics, APC6266, PSI-2, protein structure initi midwest center for structural genomics, MCSG, oxidoreductas; HET: MSE; 1.83A {Nitrosomonas europaea} SCOP: d.58.4.11
Probab=97.47 E-value=0.0019 Score=43.43 Aligned_cols=93 Identities=6% Similarity=-0.091 Sum_probs=67.7
Q ss_pred CCCceEEEEEEEecCCCHHHHHHHHHHHhHhhhhcCceeEEEEe-eeCCcceEEEEEEcCCHHHHHHHHHHhccCCChhh
Q psy7458 35 GAPNIYEVRSYSLKPGTMIEWGNNWARAITHRRNNDEAFAGFFS-QVGRLYNVHHFWCYKDLASRKETRESAWRSPGWDE 113 (139)
Q Consensus 35 ~~~~iyElRtY~lkpg~~~~~~~~~~~~l~~~~~~~~lvG~w~t-e~G~~n~v~~lw~y~~~~~r~~~r~~~~~~~~w~~ 113 (139)
...||.-+-+++++||+.++|.+.+.+.+..-...-..+++-.. ...+.++++.+=.|+|.++.++. .+.|.+++
T Consensus 20 ~~~mi~vi~~~~vkpg~~~~f~~~l~~~~~~sr~EpGcl~y~l~~~~~dp~~f~~~E~W~d~eal~aH----~~s~~~~~ 95 (124)
T 2omo_A 20 QGHMYVTIVYASVKTDKTEAFKEATRMNHEQSIREPGNMRFDILQSADDPTRFVLYEAYKTRKDAAAH----KETAHYLT 95 (124)
T ss_dssp CCSSEEEEEEEEBCGGGHHHHHHHHHHHHHHHTTSTTEEEEEEEEESSCTTEEEEEEEESSHHHHHHH----TTSHHHHH
T ss_pred CCceEEEEEEEEECcCcHHHHHHHHHHHHHHHhcCCCcEEEEEEEcCCCCCEEEEEEEECCHHHHHHH----hCCHHHHH
Confidence 33689999999999999999999999866442233344444433 44567899999999999887654 68888888
Q ss_pred hhhccccccee-eeeeeee
Q psy7458 114 CVAYTVPLIRE-MQSRILL 131 (139)
Q Consensus 114 ~~~~~~~~i~~-~~s~ll~ 131 (139)
+.....+++.. .+-.++.
T Consensus 96 ~~~~~~~ll~~~~~v~~~~ 114 (124)
T 2omo_A 96 WRDTVADWMAEPRKGVIYG 114 (124)
T ss_dssp HHHHHGGGBSSCCEEEEEE
T ss_pred HHHHHHHHhcCCcEEEEEE
Confidence 88777777665 3334443
No 15
>2fb0_A Conserved hypothetical protein; SAD, bacteroides thetaiotaom structural genomics, PSI, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron}
Probab=97.43 E-value=0.0013 Score=41.54 Aligned_cols=84 Identities=7% Similarity=-0.106 Sum_probs=62.4
Q ss_pred CceEEEEEEEecCCCHHHHHHHHHHHhHhhhhcCceeEEE-EeeeCCcceEEEEEEcCCHHHHHHHHHHhccCCChhhhh
Q psy7458 37 PNIYEVRSYSLKPGTMIEWGNNWARAITHRRNNDEAFAGF-FSQVGRLYNVHHFWCYKDLASRKETRESAWRSPGWDECV 115 (139)
Q Consensus 37 ~~iyElRtY~lkpg~~~~~~~~~~~~l~~~~~~~~lvG~w-~te~G~~n~v~~lw~y~~~~~r~~~r~~~~~~~~w~~~~ 115 (139)
.||.-+-+++++||+.++|.+.+.+.+..-...-..+++- ....++.++++.+=.|+|.++.++. .++|.++++.
T Consensus 3 ~mi~v~~~~~vkpg~~~~~~~~~~~~~~~~~~epG~l~~~~~~~~~~p~~~~~~e~w~~~~a~~~h----~~s~~~~~~~ 78 (94)
T 2fb0_A 3 SMIRLNVFVRVNETNREKAIEAAKELTACSLKEEGCIAYDTFESSTRRDVFMICETWQNAEVLAAH----EKTAHFAQYV 78 (94)
T ss_dssp CCEEEEEEEECCTTTHHHHHHHHHHHHHHHTTSTTEEEEEEEECSSCTTEEEEEEEESSHHHHHHH----TTSHHHHHHH
T ss_pred cEEEEEEEEEECcccHHHHHHHHHHHHHHHhcCCCceEEEEEEcCCCCCEEEEEEEECCHHHHHHH----hCCHHHHHHH
Confidence 5799999999999999999999998664322333444444 3344567899999999999887754 6788888887
Q ss_pred hccccccee
Q psy7458 116 AYTVPLIRE 124 (139)
Q Consensus 116 ~~~~~~i~~ 124 (139)
....+++.+
T Consensus 79 ~~~~~~l~~ 87 (94)
T 2fb0_A 79 GIIQELAEM 87 (94)
T ss_dssp HHHHHHSEE
T ss_pred HHHHHHhcC
Confidence 766666654
No 16
>3gz7_A Putative antibiotic biosynthesis monooxygenase; NP_888398.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 2.15A {Bordetella bronchiseptica}
Probab=97.40 E-value=0.00094 Score=44.59 Aligned_cols=85 Identities=12% Similarity=0.043 Sum_probs=63.7
Q ss_pred CceEEEEEEEecCCCHHHHHHHHHHHhHhhhhcCceeEEE-EeeeCCcceEEEEEEcCCHHHHHHHHHHhccCCChhhhh
Q psy7458 37 PNIYEVRSYSLKPGTMIEWGNNWARAITHRRNNDEAFAGF-FSQVGRLYNVHHFWCYKDLASRKETRESAWRSPGWDECV 115 (139)
Q Consensus 37 ~~iyElRtY~lkpg~~~~~~~~~~~~l~~~~~~~~lvG~w-~te~G~~n~v~~lw~y~~~~~r~~~r~~~~~~~~w~~~~ 115 (139)
+||+.+-+.+++||+.++|.+.+.+.+..-...-..+++- .....+.++++-+=.|+|.++.++. +.++|.++++.
T Consensus 19 ~~i~via~~~vkpg~~~~f~~~~~~~~~~~r~epGcl~y~l~r~~~~p~~f~~~E~W~s~eal~~h---f~~S~hf~~~~ 95 (115)
T 3gz7_A 19 GMIQEIASILVQPGREADFEAGVAQARPLFMRARGCHGVALHRSIEAPQRYTLVVDWETVDNHMVD---FRQSADFQEWR 95 (115)
T ss_dssp SCEEEEEEEEBCTTCHHHHHHHHHHHHHHHHTSTTEEEEEEEEESSSTTEEEEEEEESSHHHHHTT---TTTSHHHHHHH
T ss_pred eEEEEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCeEEEEEEecCCCCCEEEEEEEECCHHHHHHH---HhcCHHHHHHH
Confidence 7999999999999999999999999665433333444444 3345567899999999998877644 35788888887
Q ss_pred hccccccee
Q psy7458 116 AYTVPLIRE 124 (139)
Q Consensus 116 ~~~~~~i~~ 124 (139)
+...+++..
T Consensus 96 ~~~~~ll~~ 104 (115)
T 3gz7_A 96 KLVGECFAE 104 (115)
T ss_dssp HHHGGGBSS
T ss_pred HHHHHHhcC
Confidence 777776654
No 17
>3bm7_A Protein of unknown function with ferredoxin-like; ferredoxin-like fold, antibiotic biosynthesis monooxygenase, structural genomics; HET: MSE; 1.35A {Caulobacter crescentus}
Probab=97.40 E-value=0.0025 Score=42.17 Aligned_cols=91 Identities=10% Similarity=-0.028 Sum_probs=67.0
Q ss_pred CceEEEEEEEecCCCHHHHHHHHHHHh-Hh-hhhcCceeEEEEeeeCCcceEEEEEEcCCHHHHHHHHHHhccCCChhhh
Q psy7458 37 PNIYEVRSYSLKPGTMIEWGNNWARAI-TH-RRNNDEAFAGFFSQVGRLYNVHHFWCYKDLASRKETRESAWRSPGWDEC 114 (139)
Q Consensus 37 ~~iyElRtY~lkpg~~~~~~~~~~~~l-~~-~~~~~~lvG~w~te~G~~n~v~~lw~y~~~~~r~~~r~~~~~~~~w~~~ 114 (139)
.||.-+-+.+++||+.++|.+.+.+.+ .. +..-|-+-..+....++.++++.+=.|+|.++.++. .+.|.++++
T Consensus 19 ~~i~vi~~~~vkpg~~~~f~~~l~~~~~~~~r~EpGcl~y~l~~~~~~p~~f~~~E~W~d~ea~~aH----~~s~~~~~~ 94 (115)
T 3bm7_A 19 GMIGVVATLKVQPAKAAEFEKVFLDLAAKVKANEPGCLVYQLTRSKTEEGVYKVLELYASMDALKHH----GGTDYFKAA 94 (115)
T ss_dssp SCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHHCTTEEEEEEEECSSSTTEEEEEEEESSHHHHHHH----HHCHHHHHH
T ss_pred ccEEEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCcEEEEEEEcCCCCCEEEEEEEECCHHHHHHH----hCCHHHHHH
Confidence 679999999999999999999999977 43 433344433333344556899999999999987765 478888888
Q ss_pred hhcccccceee-eeeeee
Q psy7458 115 VAYTVPLIREM-QSRILL 131 (139)
Q Consensus 115 ~~~~~~~i~~~-~s~ll~ 131 (139)
.+...+++.+. +-..+.
T Consensus 95 ~~~~~~ll~~~~~i~~~~ 112 (115)
T 3bm7_A 95 GAAMGPTMAGAPVIEYLD 112 (115)
T ss_dssp HHHHGGGEEEEEEEEEEE
T ss_pred HHHHHHHhcCCcEEEEEE
Confidence 87777777653 333333
No 18
>4dpo_A Conserved protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.73A {Methanosarcina mazei}
Probab=97.39 E-value=0.0017 Score=43.39 Aligned_cols=91 Identities=16% Similarity=0.088 Sum_probs=66.7
Q ss_pred CceEEEEEEEecCCCHHHHHHHHHHHhHhhhhcCceeEEEEe-eeCCcceEEEEEEcCCHHHHHHHHHHhccCCChhhhh
Q psy7458 37 PNIYEVRSYSLKPGTMIEWGNNWARAITHRRNNDEAFAGFFS-QVGRLYNVHHFWCYKDLASRKETRESAWRSPGWDECV 115 (139)
Q Consensus 37 ~~iyElRtY~lkpg~~~~~~~~~~~~l~~~~~~~~lvG~w~t-e~G~~n~v~~lw~y~~~~~r~~~r~~~~~~~~w~~~~ 115 (139)
.||.-+-+++++||+.++|.+.+.+.+..-...-..+++-.. ...+.++++.+=.|+|.++.++. .+.|.++++.
T Consensus 24 ~MI~via~~~vkpg~~~~f~~~l~~~~~~~r~EpGcl~y~l~~~~~dp~~f~~~E~W~d~ea~~aH----~~s~~f~~~~ 99 (119)
T 4dpo_A 24 LAIRVVAKNQVKPEKVQEFMNLCKSLIEETLKEEGCIDYGVYQELENPEILTMLEEWKDEGSLDQH----IRSDHFKEIF 99 (119)
T ss_dssp HCEEEEEEEEBCTTTHHHHHHHHHHHHHHHHTSTTEEEEEEEEETTEEEEEEEEEEESSHHHHHHH----HTSHHHHHHH
T ss_pred ceEEEEEEEEECCCcHHHHHHHHHHHHHHHhcCCCcEEEEEEEcCCCCCEEEEEEEECCHHHHHHH----HcCHHHHHHH
Confidence 589999999999999999999999866542333344444433 44557899999999999987665 5889988888
Q ss_pred hcccccce-eeeeeeee
Q psy7458 116 AYTVPLIR-EMQSRILL 131 (139)
Q Consensus 116 ~~~~~~i~-~~~s~ll~ 131 (139)
+...+++. ..+-+++.
T Consensus 100 ~~~~~ll~~~~~i~~~~ 116 (119)
T 4dpo_A 100 PLLSECLDKETEINIYR 116 (119)
T ss_dssp HHHHHTBSSCCEEEEEE
T ss_pred HHHHHHhcCCCEEEEEe
Confidence 77777766 34444443
No 19
>1iuj_A Hypothetical protein TT1380; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.60A {Thermus thermophilus} SCOP: d.58.4.5
Probab=97.24 E-value=0.0037 Score=40.06 Aligned_cols=78 Identities=6% Similarity=-0.012 Sum_probs=58.2
Q ss_pred ceEEEEEEEecCCCHHHHHHHHHHHhHhhhhcCceeEEEE-eeeCCcceEEEEEEcCCHHHHHHHHHHhccCCChhhhhh
Q psy7458 38 NIYEVRSYSLKPGTMIEWGNNWARAITHRRNNDEAFAGFF-SQVGRLYNVHHFWCYKDLASRKETRESAWRSPGWDECVA 116 (139)
Q Consensus 38 ~iyElRtY~lkpg~~~~~~~~~~~~l~~~~~~~~lvG~w~-te~G~~n~v~~lw~y~~~~~r~~~r~~~~~~~~w~~~~~ 116 (139)
||..+-+++++||+.++|.+.+.+....-...-..+|+-. ...++.++++.+-.|+|.++.++. .++|.++++..
T Consensus 1 Mi~vi~~~~v~~g~~~~f~~~~~~~~~~~~~~pG~l~~~l~~~~~~~~~~~~~~~W~s~~a~~a~----~~s~~~~~~~~ 76 (106)
T 1iuj_A 1 MFVTMNRIPVRPEYAEQFEEAFRQRARLVDRMPGFIRNLVLRPKNPGDPYVVMTLWESEEAFRAW----TESPAFKEGHA 76 (106)
T ss_dssp CEEEEEEECBCGGGHHHHHHHHHHHGGGGTTSTTEEEEEEEEESSTTSCEEEEEEESCHHHHHHH----HTSHHHHHHTT
T ss_pred CEEEEEEEEeCcchHHHHHHHHHHHHHHhccCCCceEEEEEecCCCCCeEEEEEEECCHHHHHHH----hcCHHHHHHHh
Confidence 6888999999999999999999986654333334444443 344456899999999999998754 57888887765
Q ss_pred ccc
Q psy7458 117 YTV 119 (139)
Q Consensus 117 ~~~ 119 (139)
...
T Consensus 77 ~~~ 79 (106)
T 1iuj_A 77 RSG 79 (106)
T ss_dssp TTS
T ss_pred ccc
Confidence 554
No 20
>4hl9_A Antibiotic biosynthesis monooxygenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.93A {Rhodospirillum rubrum}
Probab=97.19 E-value=0.0032 Score=42.20 Aligned_cols=94 Identities=9% Similarity=-0.039 Sum_probs=67.4
Q ss_pred CCceEEEEEEEecCCCHHHHHHHHHHHhH-hhhhcCceeEEEEeeeCCcceEEEEEEcCCHHHHHHHHHHhccCCChhhh
Q psy7458 36 APNIYEVRSYSLKPGTMIEWGNNWARAIT-HRRNNDEAFAGFFSQVGRLYNVHHFWCYKDLASRKETRESAWRSPGWDEC 114 (139)
Q Consensus 36 ~~~iyElRtY~lkpg~~~~~~~~~~~~l~-~~~~~~~lvG~w~te~G~~n~v~~lw~y~~~~~r~~~r~~~~~~~~w~~~ 114 (139)
..||.-+=+.++|||+.++|.+.+++.+. .|..-|-+--.+.....+.|+++-+=.|+|.++.++.. +.|.++++
T Consensus 21 ~sMi~viA~~~vkP~~~d~~~~~~~~l~~~tr~EpGcl~y~l~~d~~dp~~f~~~E~w~d~~al~~H~----~s~h~~~~ 96 (118)
T 4hl9_A 21 QSMLKVIAQDFIKPEAIDIVLPLYRELVEKTRQEPLCLAYDLFVDQKDPGHFVFIEEWPDRAALDIHC----ATEHFTRL 96 (118)
T ss_dssp --CEEEEEEEEECGGGHHHHHHHHHHHHHHHHTSTTCCEEEEEEETTEEEEEEEEEEESSHHHHHHHH----HSHHHHHH
T ss_pred heeeEEEEEEEECchhHHHHHHHHHHHHHHHhcCCCcEEEEEEEcCCCCCEEEEEEEeCCHHHHHHHH----CCHHHHHH
Confidence 37999999999999999999999999665 35444444333444455578888888999988887764 67888888
Q ss_pred hhcccccce-eeeeeeeeec
Q psy7458 115 VAYTVPLIR-EMQSRILLPT 133 (139)
Q Consensus 115 ~~~~~~~i~-~~~s~ll~p~ 133 (139)
.+...+++. ..+-.++.+.
T Consensus 97 ~~~l~~~l~~~~~i~~l~~V 116 (118)
T 4hl9_A 97 VPLINAHQRQDGTVVLMDAV 116 (118)
T ss_dssp HHHHHTTEEEEEEEEEEEEC
T ss_pred HHHHHHHhcCCCEEEEEeec
Confidence 877777655 3444555444
No 21
>4dn9_A Antibiotic biosynthesis monooxygenase; structural genomics,protein structure initiative, NEW YORK S genomix research consortium, nysgrc; 2.05A {Chloroflexus aurantiacus}
Probab=97.11 E-value=0.0046 Score=41.52 Aligned_cols=90 Identities=10% Similarity=0.013 Sum_probs=63.3
Q ss_pred ccCCCCCCceEEEEEEEecCCCHHHHHHHHHHHhHhhhhcCceeEEEEe-eeCCcceEEEEEEcCCHHHHHHHHHHhccC
Q psy7458 30 IETRSGAPNIYEVRSYSLKPGTMIEWGNNWARAITHRRNNDEAFAGFFS-QVGRLYNVHHFWCYKDLASRKETRESAWRS 108 (139)
Q Consensus 30 ~~~~~~~~~iyElRtY~lkpg~~~~~~~~~~~~l~~~~~~~~lvG~w~t-e~G~~n~v~~lw~y~~~~~r~~~r~~~~~~ 108 (139)
.++... +||..+-+++++||+.++|.+.+.+. .+..- ..+.+-.. ...+.++++.+=.|+|.++.++. .+.
T Consensus 16 ~n~~~~-~Mi~via~~~vkpg~~~ef~~~l~~~--~r~Ep-Gcl~y~l~~~~~dp~~f~~~E~W~d~ea~~aH----~~s 87 (122)
T 4dn9_A 16 ENLYFQ-SMYGLIGKMRATPGQRDALIAILVEG--ASSMP-GCLSYVVAQDPKDPDAIWITEVWDSPESHKAS----LSL 87 (122)
T ss_dssp -------CCEEEEEEEEESTTCHHHHHHHHHHH--TTTCT-TEEEEEEEEETTEEEEEEEEEEESCHHHHHHG----GGS
T ss_pred cCccCC-CcEEEEEEEEECCCCHHHHHHHHHHH--HhCCC-CCEEEEEEecCCCCCEEEEEEEECCHHHHHHH----HcC
Confidence 344555 89999999999999999999987543 23222 44444433 44557889888889999886554 589
Q ss_pred CChhhhhhcccccceeeee
Q psy7458 109 PGWDECVAYTVPLIREMQS 127 (139)
Q Consensus 109 ~~w~~~~~~~~~~i~~~~s 127 (139)
|.++++.+...+++.+...
T Consensus 88 ~~f~~~~~~~~~ll~~~p~ 106 (122)
T 4dn9_A 88 PSVQDAIACGRPLIAALDE 106 (122)
T ss_dssp HHHHHHHHHHGGGEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCe
Confidence 9999998888888876543
No 22
>3kg0_A Snoab; polyketide, anthracycline, oxygenase, cofactor-independent, oxidoreductase; 1.70A {Streptomyces nogalater} PDB: 3kg1_A 3kng_A
Probab=96.91 E-value=0.028 Score=38.02 Aligned_cols=90 Identities=10% Similarity=0.100 Sum_probs=65.2
Q ss_pred CCceEEEEEEEecCCCHHHHHHHHHHHhHhhhhcCceeEEEEe-eeCCcceEEEEEEcCCHHHHHHHHHHhccCCChhhh
Q psy7458 36 APNIYEVRSYSLKPGTMIEWGNNWARAITHRRNNDEAFAGFFS-QVGRLYNVHHFWCYKDLASRKETRESAWRSPGWDEC 114 (139)
Q Consensus 36 ~~~iyElRtY~lkpg~~~~~~~~~~~~l~~~~~~~~lvG~w~t-e~G~~n~v~~lw~y~~~~~r~~~r~~~~~~~~w~~~ 114 (139)
..||..+-+++++|| .++|.+.|.+....-...-..+++-.- ..++.++++-+-.|+|.++.++-. ++|++++.
T Consensus 21 ~~mi~via~~~V~pg-~~~f~~~~~~~~~~~~~~pGfi~~~L~r~~~~p~~yv~~~~W~s~ea~~a~~----~S~~f~a~ 95 (128)
T 3kg0_A 21 ADEVTFVNRFTVHGA-PAEFESVFARTAAFFARQPGFVRHTLLRERDKDNSYVNIAVWTDHDAFRRAL----AQPGFLPH 95 (128)
T ss_dssp CCCEEEEEEEEECSC-HHHHHHHHHHHHHHHHTSTTEEEEEEEECTTCSSEEEEEEEESSHHHHHHHH----HCGGGHHH
T ss_pred CCcEEEEEEEEeCCC-HHHHHHHHHHHHHHHhcCCCccEEEEEEcCCCCCEEEEEEEECCHHHHHHHH----cCHHHHHH
Confidence 479999999999999 999999999966543333345554433 233458999999999999988875 58888887
Q ss_pred hhcccccceeeeeeeee
Q psy7458 115 VAYTVPLIREMQSRILL 131 (139)
Q Consensus 115 ~~~~~~~i~~~~s~ll~ 131 (139)
.+...+++.. +..++.
T Consensus 96 ~~~l~~~~~~-~p~lye 111 (128)
T 3kg0_A 96 ATALRALSTS-EHGLFT 111 (128)
T ss_dssp HHHHHHHEEE-EEEEEC
T ss_pred HHhhhhhccC-CCeeEE
Confidence 7666555543 344433
No 23
>3f44_A Putative monooxygenase; YP_193413.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.55A {Lactobacillus acidophilus ncfm}
Probab=96.25 E-value=0.029 Score=41.29 Aligned_cols=92 Identities=8% Similarity=0.060 Sum_probs=69.5
Q ss_pred CceEEEEEEEecCCCHHHHHHHHHHHh-Hh-hhhcCceeEEEEeeeCCcceEEEEEEcCCHHHHHHHHHHhccCCChhhh
Q psy7458 37 PNIYEVRSYSLKPGTMIEWGNNWARAI-TH-RRNNDEAFAGFFSQVGRLYNVHHFWCYKDLASRKETRESAWRSPGWDEC 114 (139)
Q Consensus 37 ~~iyElRtY~lkpg~~~~~~~~~~~~l-~~-~~~~~~lvG~w~te~G~~n~v~~lw~y~~~~~r~~~r~~~~~~~~w~~~ 114 (139)
..|+-+-..+++||+.++|.+.+.+.+ +. +..-|.+.-.+..+.++.|+++.+=.|.|.++.++.. +.|-++++
T Consensus 5 ~pi~~i~~~~vkp~~~~~f~~~~~~~~~~s~~~E~G~l~y~~~~~~~~p~~~~~~E~y~d~~A~~~H~----~s~h~~~~ 80 (220)
T 3f44_A 5 TPIFKIKKLTIAENDRSEYIRYAEKNMHDSIPAEEGTLLIGSGHDDAHGEDNYEIEVFRNKGAEDLHI----AGSHADDF 80 (220)
T ss_dssp CCEEEEEEEEECGGGHHHHHHHHHHHHHHHTTTSTTEEEEEEEEETTEEEEEEEEEEESSHHHHHHHH----TSHHHHHH
T ss_pred CcEEEEEEEEECcchHHHHHHHHHHHhhhhhccCCCeEEEEEEecCCCCcEEEEEEEECCHHHHHHHh----cCHHHHHH
Confidence 468888899999999999999999854 44 4455666545555666678999999999999988884 78888888
Q ss_pred hhcccccceeeeeeeeee
Q psy7458 115 VAYTVPLIREMQSRILLP 132 (139)
Q Consensus 115 ~~~~~~~i~~~~s~ll~p 132 (139)
.....+++.+.....+.|
T Consensus 81 ~~~~~~~l~~~~~~~l~p 98 (220)
T 3f44_A 81 VETVNKIATKQKVIDLHP 98 (220)
T ss_dssp HHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHhhCCceeeeee
Confidence 877667666555444444
No 24
>3mcs_A Putative monooxygenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.55A {Fusobacterium nucleatum subsp}
Probab=95.93 E-value=0.049 Score=40.20 Aligned_cols=87 Identities=7% Similarity=-0.051 Sum_probs=69.6
Q ss_pred CceEEEEEEEecCCCHHHHHHHHHHHh-Hh-hhhcCceeEEEEeeeCCcceEEEEEEcCCHHHHHHHHHHhccCCChhhh
Q psy7458 37 PNIYEVRSYSLKPGTMIEWGNNWARAI-TH-RRNNDEAFAGFFSQVGRLYNVHHFWCYKDLASRKETRESAWRSPGWDEC 114 (139)
Q Consensus 37 ~~iyElRtY~lkpg~~~~~~~~~~~~l-~~-~~~~~~lvG~w~te~G~~n~v~~lw~y~~~~~r~~~r~~~~~~~~w~~~ 114 (139)
..|+-+-..+++||+.++|.+...+.+ +. |..-|.+.-.+..+.++.|+++-+=.|.|.++.++.. +.|-++++
T Consensus 5 ~pi~~ia~~~vkp~~~~~f~~~~~~~~~~s~r~EpG~l~y~~~~~~~~p~~fv~~E~y~d~~A~~~H~----~s~Hf~~f 80 (219)
T 3mcs_A 5 VPILNVYDFEVKKDKETSYKSATEDYVNKTMGVEQGVLGLFAATDERDKTTSYIVEIYNDYLAFSNHT----KNQASKDF 80 (219)
T ss_dssp CCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHHCSSEEEEEEEEECSSSCEEEEEEEESSHHHHHHHH----HSHHHHHH
T ss_pred ccEEEEEEEEECcCcHHHHHHHHHHHhhhhhhcCCCeEEEEEEeeCCCCCEEEEEEEECCHHHHHHHh----CCHHHHHH
Confidence 568889999999999999999999854 44 5555666656666777789999999999999988874 78888888
Q ss_pred hhcccccceeeee
Q psy7458 115 VAYTVPLIREMQS 127 (139)
Q Consensus 115 ~~~~~~~i~~~~s 127 (139)
.....+++.+...
T Consensus 81 ~~~~~~~l~~~~~ 93 (219)
T 3mcs_A 81 KAVIPQIAEGNLN 93 (219)
T ss_dssp HHHHHHHEEEEEE
T ss_pred HHHHHHHHhCCcc
Confidence 8777777776443
No 25
>2ril_A Antibiotic biosynthesis monooxygenase; YP_001095275.1, putative monooxygenase, antibiotic biosynthe monooxygenase, structural genomics; HET: MSE; 1.26A {Shewanella loihica}
Probab=95.92 E-value=0.1 Score=33.05 Aligned_cols=66 Identities=3% Similarity=0.011 Sum_probs=46.7
Q ss_pred CceEEEEEEEecCCCHHHHHHHHHHHhHhhhhcCceeEEE-EeeeCCcce--EEEEEEcCCHHHHHHHH
Q psy7458 37 PNIYEVRSYSLKPGTMIEWGNNWARAITHRRNNDEAFAGF-FSQVGRLYN--VHHFWCYKDLASRKETR 102 (139)
Q Consensus 37 ~~iyElRtY~lkpg~~~~~~~~~~~~l~~~~~~~~lvG~w-~te~G~~n~--v~~lw~y~~~~~r~~~r 102 (139)
.||..+-+++++||+.++|.+.+.+.+..-...-..+++= ....++.++ ++-+-.|+|.++.++..
T Consensus 4 ~mi~~i~~~~v~pg~~~~f~~~~~~~~~~~~~~pG~i~~~l~~~~~~~~~~~~~~~~~W~s~ea~~a~~ 72 (99)
T 2ril_A 4 APVTLINPFKVPADKLEAAIEYWEAHRDFMAQQPGYLSTQLHQSIDEGATYQLINVAIWQSEADFYQAA 72 (99)
T ss_dssp CCEEEEEEEBCCTTCHHHHHHHHHHHHHHHTTSTTEEEEEEEECSSTTSSCSEEEEEEESCHHHHHHHH
T ss_pred ceEEEEEEEEECCccHHHHHHHHHHHHHHHhcCCCeeeEEEeecCCCCCeEEEEEEEEECCHHHHHHHH
Confidence 5899999999999999999999998665322222333332 222233454 58999999999998843
No 26
>3hx9_A Protein RV3592; DI-heme, beta barrel, dimer, oxidoreductase; HET: HEM; 1.75A {Mycobacterium tuberculosis}
Probab=95.65 E-value=0.1 Score=35.07 Aligned_cols=65 Identities=8% Similarity=-0.022 Sum_probs=47.3
Q ss_pred ceEEEEEEEecCCCHHHHHHHHHHHhHhhhhcCceeEEEEe-eeCCcceEEEEEEcCCHHHHHHHH
Q psy7458 38 NIYEVRSYSLKPGTMIEWGNNWARAITHRRNNDEAFAGFFS-QVGRLYNVHHFWCYKDLASRKETR 102 (139)
Q Consensus 38 ~iyElRtY~lkpg~~~~~~~~~~~~l~~~~~~~~lvG~w~t-e~G~~n~v~~lw~y~~~~~r~~~r 102 (139)
||..+-+++++||+.++|.+.|.+....-...-..+|+-.- ...+.++++-+-.|+|.++.++-+
T Consensus 2 mivvi~~~~V~pg~~~efe~~~~~~~~~~~~~pGfl~~~L~r~~~~p~~yv~~~~WeS~ea~~aw~ 67 (124)
T 3hx9_A 2 PVVKINAIEVPAGAGPELEKRFAHRAHAVENSPGFLGFQLLRPVKGEERYFVVTHWESDEAFQAWA 67 (124)
T ss_dssp CEEEEEEECCCTTCHHHHHHHHHHTTTTTTTCTTEEEEEEEEEEESCCSEEEEEEESCHHHHHHHH
T ss_pred EEEEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCCEEEEEEEECCHHHHHHHH
Confidence 68899999999999999999999865432232244444322 233458899999999999887654
No 27
>1lq9_A Actva-ORF6 monooxygenase; aromatic polyketides, actinorhodin, dihydroka streptomyces coelicolor, oxidoreductase; HET: PG4; 1.30A {Streptomyces coelicolor} SCOP: d.58.4.3 PDB: 1n5q_A* 1n5s_A* 1n5t_A* 1n5v_A*
Probab=95.14 E-value=0.1 Score=34.39 Aligned_cols=95 Identities=11% Similarity=0.030 Sum_probs=64.1
Q ss_pred CceEEEEEEEecCCCHHHHHHHHHHHhH--hhhhcCceeEE-EEeeeCCcceEEEEEEcCCHHHHHHHHHHhccCCChhh
Q psy7458 37 PNIYEVRSYSLKPGTMIEWGNNWARAIT--HRRNNDEAFAG-FFSQVGRLYNVHHFWCYKDLASRKETRESAWRSPGWDE 113 (139)
Q Consensus 37 ~~iyElRtY~lkpg~~~~~~~~~~~~l~--~~~~~~~lvG~-w~te~G~~n~v~~lw~y~~~~~r~~~r~~~~~~~~w~~ 113 (139)
+.+.=.++..++||+.++|.+.+.+.+. .+..-| .+++ .....++ ++++.+=.|+|.++.++.-.+=.++|.+++
T Consensus 9 ~~v~iva~~~~~pg~~~~~~~~l~~~~~~~~r~epG-~i~y~Lh~~~d~-~~~v~~e~W~s~ea~~ah~~~~~~s~~f~~ 86 (112)
T 1lq9_A 9 GFVAVVTFPVDGPATQHKLVELATGGVQEWIREVPG-FLSATYHASTDG-TAVVNYAQWESEQAYRVNFGADPRSAELRE 86 (112)
T ss_dssp CEEEEEEEEBSSHHHHHHHHHHHTTTTTGGGGGSTT-EEEEEEEEETTS-SEEEEEEEESCHHHHHHHTTTSHHHHHHHH
T ss_pred CEEEEEEEEecCcchHHHHHHHHHHHHHHHhhcCCC-eEEEEEEEcCCC-CeEEEEEEECCHHHHHHHHhcccCCHHHHH
Confidence 5566667777899999999999998764 343323 3333 2222322 455888889999888776111035677888
Q ss_pred hhhcccccceeeeeeeeeec
Q psy7458 114 CVAYTVPLIREMQSRILLPT 133 (139)
Q Consensus 114 ~~~~~~~~i~~~~s~ll~p~ 133 (139)
+......++.+.....|.|.
T Consensus 87 ~~~~~~~l~~~~~~~~~~~~ 106 (112)
T 1lq9_A 87 ALSSLPGLMGPPKAVFMTPR 106 (112)
T ss_dssp HHHTSTTBCSCCEEEEEEEE
T ss_pred HHHHhHHHhcCccceEEEEc
Confidence 87778888887777777764
No 28
>1tz0_A Hypothetical protein; structural genomics, protein structure initiative, MCSG, HYP protein, PSI; 1.84A {Bacillus cereus atcc 14579} SCOP: d.58.4.5
Probab=95.07 E-value=0.18 Score=33.11 Aligned_cols=74 Identities=11% Similarity=-0.043 Sum_probs=52.6
Q ss_pred CceEEEEEEEecCCCHHHHHHHHHHHhHhhhhcCceeEE--EEeeeC-CcceEEEEEEcCCHHHHHHHHHHhccCCChhh
Q psy7458 37 PNIYEVRSYSLKPGTMIEWGNNWARAITHRRNNDEAFAG--FFSQVG-RLYNVHHFWCYKDLASRKETRESAWRSPGWDE 113 (139)
Q Consensus 37 ~~iyElRtY~lkpg~~~~~~~~~~~~l~~~~~~~~lvG~--w~te~G-~~n~v~~lw~y~~~~~r~~~r~~~~~~~~w~~ 113 (139)
.||.++-.++++||+.++|.+.|.+. ..-...-..+|+ +.+... +.+.++-+-.|+|.++..+ ..+++++++
T Consensus 6 ~Mi~vi~~~~V~~g~~~~fe~~~~~~-~~l~~~pGFi~~~llr~~~~~~~~~y~~~~~W~s~eaf~a----w~~S~~f~~ 80 (114)
T 1tz0_A 6 YMFIETKTFTVKEGTSNIVVERFTGE-GIIEKFEGFIDLSVLVKKVRRGDEEVVVMIRWESEEAWKN----WETSEEHLA 80 (114)
T ss_dssp CCEEEEEEEEECTTCHHHHHHHTCSC-CSGGGBTTEEEEEEEECCCSSSSEEEEEEEEESCHHHHHH----HHTCSCCCG
T ss_pred ceEEEEEEEEECCCcHHHHHHHHhcc-chhhcCCCeeEEEEEEcCCCCCCcEEEEEEEECCHHHHHH----HHcCHHHHH
Confidence 39999999999999999999999886 433333344443 333331 3578999999999998653 346666655
Q ss_pred hh
Q psy7458 114 CV 115 (139)
Q Consensus 114 ~~ 115 (139)
..
T Consensus 81 ~~ 82 (114)
T 1tz0_A 81 GH 82 (114)
T ss_dssp GG
T ss_pred HH
Confidence 43
No 29
>3tvz_A Putative uncharacterized protein YHGC; putative monooxygenase, ABM family, ferredoxin fold, monooxy oxidoreductase; 2.00A {Bacillus subtilis subsp}
Probab=94.76 E-value=0.15 Score=36.03 Aligned_cols=75 Identities=8% Similarity=-0.048 Sum_probs=48.2
Q ss_pred CCceEEEEEEEecCCCHHHHHHHHHHHhHhhhhcCceeEEE--EeeeCCcceEEEEEEcCCHHHHHHHHHHhccCCChhh
Q psy7458 36 APNIYEVRSYSLKPGTMIEWGNNWARAITHRRNNDEAFAGF--FSQVGRLYNVHHFWCYKDLASRKETRESAWRSPGWDE 113 (139)
Q Consensus 36 ~~~iyElRtY~lkpg~~~~~~~~~~~~l~~~~~~~~lvG~w--~te~G~~n~v~~lw~y~~~~~r~~~r~~~~~~~~w~~ 113 (139)
..||+.+-..+++||+.++|.+.|.+....-...-..+|+- .+.. + ++++-+-.|+|.++.++ ..+++++++
T Consensus 69 ~~m~~vin~~~V~pg~~~~Fe~~~~~~~~~l~~~pGfi~~~llr~~~-~-~~y~~~t~Wes~eaf~a----w~~S~~f~~ 142 (172)
T 3tvz_A 69 HPGFAVLNNIAVTQEGRPLFENKFKNRAGKVENEPGFEAIRVLRPLD-S-DTYVILTLWETERAFQD----WQQSDSYKE 142 (172)
T ss_dssp CCSEEEEEEEECCGGGHHHHHHHHTSSHHHHTTSTTEEEEEEEEESS-S-SEEEEEEEESCHHHHHH----HTCC-----
T ss_pred CCcEEEEEEEEcCCCcHHHHHHHHHHhHHHHhcCCCceEEEEEecCC-C-CEEEEEEEECCHHHHHH----HHcCHHHHH
Confidence 37999999999999999999999987443322222444433 3333 3 78999999999997554 357787777
Q ss_pred hhh
Q psy7458 114 CVA 116 (139)
Q Consensus 114 ~~~ 116 (139)
.-+
T Consensus 143 ah~ 145 (172)
T 3tvz_A 143 AHK 145 (172)
T ss_dssp ---
T ss_pred HHH
Confidence 543
No 30
>1sqe_A Hypothetical protein PG130; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.50A {Staphylococcus aureus} SCOP: d.58.4.5 PDB: 2zdp_A* 3lgm_A* 3lgn_A* 3qgp_A*
Probab=94.59 E-value=0.14 Score=32.87 Aligned_cols=72 Identities=11% Similarity=0.010 Sum_probs=51.0
Q ss_pred CceEEEEEEEecCCCHHHHHHHHHHHhHhhhhcCceeEEEEe-eeCCc--ceEEEEEEcCCHHHHHHHHHHhccCCChhh
Q psy7458 37 PNIYEVRSYSLKPGTMIEWGNNWARAITHRRNNDEAFAGFFS-QVGRL--YNVHHFWCYKDLASRKETRESAWRSPGWDE 113 (139)
Q Consensus 37 ~~iyElRtY~lkpg~~~~~~~~~~~~l~~~~~~~~lvG~w~t-e~G~~--n~v~~lw~y~~~~~r~~~r~~~~~~~~w~~ 113 (139)
.||..+-+++++||+.++|.+.|.+. ..-...-..+|+-.. ...+. ++++-+-.|+|.++.++- .++|.+++
T Consensus 1 ~Mi~vi~~~~v~pg~~~~f~~~~~~~-~~~~~~pG~l~~~l~r~~~~~~~~~~~~~~~W~s~ea~~a~----~~s~~f~~ 75 (109)
T 1sqe_A 1 HMFMAENRLQLQKGSAEETIERFYNR-QGIETIEGFQQMFVTKTLNTEDTDEVKILTIWESEDSFNNW----LNSDVFKE 75 (109)
T ss_dssp CCEEEEEEEEECTTCHHHHGGGGGCC-TTGGGSTTEEEEEEEEETTCSSSEEEEEEEEESCHHHHHHH----HTSHHHHH
T ss_pred CEEEEEEEEEECCCcHHHHHHHHhcc-cccccCCCeEEEEEEEcCCCCCCcEEEEEEEECCHHHHHHH----HcCHHHHH
Confidence 38999999999999999999988876 433333344444333 23334 899999999999987755 35555544
No 31
>2zdo_A Heme-degrading monooxygenase ISDG; ruffling, protein-substrate complex, cytoplasm, iron, metal-binding, oxidoreductase; HET: HEM; 1.80A {Staphylococcus aureus} PDB: 1xbw_A
Probab=94.53 E-value=0.21 Score=32.15 Aligned_cols=73 Identities=10% Similarity=0.032 Sum_probs=51.5
Q ss_pred ceEEEEEEEecCCCHHHHHHHHHHHhHhhhhcCceeEEEEe-eeCCcc--eEEEEEEcCCHHHHHHHHHHhccCCChhhh
Q psy7458 38 NIYEVRSYSLKPGTMIEWGNNWARAITHRRNNDEAFAGFFS-QVGRLY--NVHHFWCYKDLASRKETRESAWRSPGWDEC 114 (139)
Q Consensus 38 ~iyElRtY~lkpg~~~~~~~~~~~~l~~~~~~~~lvG~w~t-e~G~~n--~v~~lw~y~~~~~r~~~r~~~~~~~~w~~~ 114 (139)
||..+-+++++||+.++|.+.|.+. ..-...-..+|+-.- ...+.+ .++-+-.|+|.++.++- .+++.+++.
T Consensus 4 Mi~vi~~~~v~pg~~~~f~~~~~~~-~~~~~~pG~i~~~l~r~~~~~~~~~~~~~~~W~s~ea~~a~----~~s~~f~~~ 78 (109)
T 2zdo_A 4 KFMAEARLTLTKGTAKDIIERFYTR-HGIETLEGFDGMFVTQTLEQEDFDEVKILTVWKSKQAFTDW----LKSDVFKAA 78 (109)
T ss_dssp CEEEEEEEEEETTCHHHHHHHTTSC-CSGGGCTTEEEEEEEEETTCSSEEEEEEEEEESCHHHHHHH----HTSHHHHHH
T ss_pred EEEEEEEEEeCCCCHHHHHHHHhcc-cccccCCCeEEEEEEecCCCCCceEEEEEEEECCHHHHHHH----HcCHHHHHH
Confidence 7999999999999999999998886 433233344444332 223333 89999999999987654 356666664
Q ss_pred h
Q psy7458 115 V 115 (139)
Q Consensus 115 ~ 115 (139)
.
T Consensus 79 ~ 79 (109)
T 2zdo_A 79 H 79 (109)
T ss_dssp H
T ss_pred H
Confidence 4
No 32
>3fgv_A Uncharacterized protein with ferredoxin-like fold; phosphoserine aminotransferase SERC, structural genomics; HET: MSE; 1.30A {Silicibacter pomeroyi dss-3}
Probab=91.90 E-value=1.7 Score=28.15 Aligned_cols=82 Identities=2% Similarity=-0.050 Sum_probs=50.7
Q ss_pred ceEEEEEEEecCCCHHHHHHHHHHHhHhhhhcCceeEEEEeeeCCcceEEEEEEcCCHHHHHHHHHHhccCCChhhhhhc
Q psy7458 38 NIYEVRSYSLKPGTMIEWGNNWARAITHRRNNDEAFAGFFSQVGRLYNVHHFWCYKDLASRKETRESAWRSPGWDECVAY 117 (139)
Q Consensus 38 ~iyElRtY~lkpg~~~~~~~~~~~~l~~~~~~~~lvG~w~te~G~~n~v~~lw~y~~~~~r~~~r~~~~~~~~w~~~~~~ 117 (139)
++.-+=+-+++||+.++|.+.+.+.++.-+..-..+++-+...-+.+.-..+=.|+|.++.++.+ +.+..+.+.++
T Consensus 14 ~~~Via~l~~kp~~~~~~~~~~~~lv~~tr~e~Gci~~~y~L~qd~~~p~~fE~W~s~eal~~h~----~~~~~~~~~~~ 89 (106)
T 3fgv_A 14 REVVIVKSTPQRGKFNAFAELVGKLVSETRDFPGCLGAYLMLAPERNEQVVMHIWETPDALEAYL----TWRADRGDFLE 89 (106)
T ss_dssp CEEEEEEECBCTTCHHHHHHHHHHHHHHHHTSTTEEEEEEEEEGGGTEEEEEEEESSHHHHHHHH----HHHTTCHHHHH
T ss_pred eEEEEEEEEECCCCHHHHHHHHHHHHHHHhCCCCCCcceEEEecCCCCCCEEEEECCHHHHHHHH----cCHHHHHHHHH
Confidence 36677788999999999999999977653343445553222222222222226778888887654 34444455555
Q ss_pred ccccce
Q psy7458 118 TVPLIR 123 (139)
Q Consensus 118 ~~~~i~ 123 (139)
.++++.
T Consensus 90 l~~lla 95 (106)
T 3fgv_A 90 INEYLE 95 (106)
T ss_dssp GGGGBS
T ss_pred HHHHhc
Confidence 666655
No 33
>3fj2_A Monooxygenase-like protein; structural genomics, joint cente structural genomics, JCSG, protein structure initiative, PS unknown function; HET: MSE; 1.85A {Listeria innocua} PDB: 3fez_A*
Probab=87.90 E-value=5.8 Score=28.34 Aligned_cols=75 Identities=9% Similarity=-0.010 Sum_probs=53.3
Q ss_pred CceEEEEEEEecCCCHHHHHHHHHHHhHhhhhcCceeEEEEeeeCCcceEEEEEEcCCHHHHHHHHHHhccCCChhhhh
Q psy7458 37 PNIYEVRSYSLKPGTMIEWGNNWARAITHRRNNDEAFAGFFSQVGRLYNVHHFWCYKDLASRKETRESAWRSPGWDECV 115 (139)
Q Consensus 37 ~~iyElRtY~lkpg~~~~~~~~~~~~l~~~~~~~~lvG~w~te~G~~n~v~~lw~y~~~~~r~~~r~~~~~~~~w~~~~ 115 (139)
.+++-+-.++++||..++|.+.|.+....-...-..+++..-..=+.++++-+-.++|.++..+=+ +++++++.-
T Consensus 84 ~gfvv~n~~~V~~g~~~~Fe~~f~~~~~~l~~~pGFis~eLLr~~~~~~yv~lT~WeseeaF~aW~----~S~afr~ah 158 (186)
T 3fj2_A 84 FGIVVFEYIQLRDEEIPIFLQMYQHASLHFSETPGLQSTKLTKAMNTNQFLIVSFWDSEVFFQEWK----KTPLHKEIT 158 (186)
T ss_dssp CSEEEEEEEECCGGGHHHHHHHHHHHHTTGGGSTTEEEEEEEEETTSSEEEEEEEESSHHHHHHHT----TSHHHHHHH
T ss_pred CCEEEEEEEEcCcccHHHHHHHHHHhHHhhhcCCCceEEEEEecCCCCEEEEEEEECCHHHHHHHH----cCHHHHHHH
Confidence 679999999999999999999998754432233355554433211257999999999998887653 666666644
No 34
>1tuw_A Tetracenomycin polyketide synthesis protein TCMI; dimeric ??? ferredoxin-like fold tetracenomycin C biosynthes unknown function; 1.90A {Streptomyces glaucescens} SCOP: d.58.4.8
Probab=85.18 E-value=3.9 Score=26.85 Aligned_cols=79 Identities=9% Similarity=0.006 Sum_probs=52.3
Q ss_pred ceEEEEEEEecCCCHHHHHHHHHHH----hHhhhhcCceeEEEEeeeCCcceEEEEEEcCCHHHHHHHHHHhccCCChhh
Q psy7458 38 NIYEVRSYSLKPGTMIEWGNNWARA----ITHRRNNDEAFAGFFSQVGRLYNVHHFWCYKDLASRKETRESAWRSPGWDE 113 (139)
Q Consensus 38 ~iyElRtY~lkpg~~~~~~~~~~~~----l~~~~~~~~lvG~w~te~G~~n~v~~lw~y~~~~~r~~~r~~~~~~~~w~~ 113 (139)
|-.-|-++.++||..++.-++|.+. ++... | ..+-..=..++ -++||-.+++..... -.+...+|++++
T Consensus 2 M~r~lIVaRm~pg~~~~VA~iFae~D~telP~~~--G-v~rR~LF~~~d--lY~HLie~d~d~~~~--i~~~r~~P~f~~ 74 (109)
T 1tuw_A 2 AYRALMVLRMDPADAEHVAAAFAEHDTTELPLEI--G-VRRRVLFRFHD--LYMHLIEADDDIMER--LYQARSHPLFQE 74 (109)
T ss_dssp CEEEEEEEEECGGGHHHHHHHHHHHTTSSHHHHH--T-CCEEEEEEETT--EEEEEEEESSCCHHH--HHHTTSCGGGHH
T ss_pred CceEEEEEeeCCCCHHHHHHHHHhcCCCcCchhc--C-ceeeEEEEeCC--EEEEEEeccCCchHH--HHHHhcCcHHHH
Confidence 3456889999999999999999883 33221 1 12221113344 899999999432222 356679999999
Q ss_pred hhhcccccce
Q psy7458 114 CVAYTVPLIR 123 (139)
Q Consensus 114 ~~~~~~~~i~ 123 (139)
....+.++|.
T Consensus 75 i~~~L~~yi~ 84 (109)
T 1tuw_A 75 VNERVGQYLT 84 (109)
T ss_dssp HHHHHHTTEE
T ss_pred HHHHHHHhcC
Confidence 8776666654
No 35
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=83.52 E-value=4.5 Score=25.69 Aligned_cols=70 Identities=10% Similarity=0.142 Sum_probs=42.1
Q ss_pred EEEEEEEec-CCCHHHHHHHHHHHhHhhhhcCceeEE---EEeeeCCcceEEEEEEcCCHHHHHHHHHHhccCCChhhhh
Q psy7458 40 YEVRSYSLK-PGTMIEWGNNWARAITHRRNNDEAFAG---FFSQVGRLYNVHHFWCYKDLASRKETRESAWRSPGWDECV 115 (139)
Q Consensus 40 yElRtY~lk-pg~~~~~~~~~~~~l~~~~~~~~lvG~---w~te~G~~n~v~~lw~y~~~~~r~~~r~~~~~~~~w~~~~ 115 (139)
|=+-.+++. +....+|.+.....+. +..|+++.. -....|+...-+.|.+|+|+++-.+- +++|++++..
T Consensus 7 Y~I~~~~v~d~e~y~~Y~~~~~~~~~--~~gGr~l~~g~~~~~~eG~~~~~~viieFpS~~aa~~~----~~s~~Yq~a~ 80 (99)
T 2fiu_A 7 YWIAQVDVRDSERYKDYVSTAKPAFE--RFGANFLARGGSVTELEGTARARNVVIEFPSVQHAIDC----YNSPEYQAAA 80 (99)
T ss_dssp EEEEEEEESCHHHHHHHHHHHHHHHH--HTTCEEEEESCCEEEEESCCCSEEEEEEESSHHHHHHH----HHSHHHHHHH
T ss_pred EEEEEEEeCCHHHHHHHHHHHHHHHH--HcCcEEEEECCCceEEecCCcCeEEEEECCCHHHHHHH----HcCHHHHHHH
Confidence 444444443 3334444444333332 234577633 33456775558889999999887655 6899999865
No 36
>2okq_A Hypothetical protein YBAA; YBAA protein, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 1.80A {Shigella flexneri} SCOP: d.58.4.18
Probab=82.45 E-value=6.2 Score=27.00 Aligned_cols=76 Identities=13% Similarity=0.121 Sum_probs=55.9
Q ss_pred eEEEEEEEecCCCHHHHHHHHHHHhHhhhhcC--ceeEEEEeee--CCc------------ceE-EEEEEcCCHHHHHHH
Q psy7458 39 IYEVRSYSLKPGTMIEWGNNWARAITHRRNND--EAFAGFFSQV--GRL------------YNV-HHFWCYKDLASRKET 101 (139)
Q Consensus 39 iyElRtY~lkpg~~~~~~~~~~~~l~~~~~~~--~lvG~w~te~--G~~------------n~v-~~lw~y~~~~~r~~~ 101 (139)
.++-=.--+.-.+.++|.+.-+.+-+..+.+| +.+=+|-.++ |.. .+| .--..|+|-++|++.
T Consensus 27 YVDGFv~pVP~ankeaY~~~A~~a~~vfke~GAl~~vEcWgdDVp~Gk~TsF~~AVkak~dEtVVFSWi~wPsKa~RDa~ 106 (141)
T 2okq_A 27 YVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKAEENEEVVFSWIEYPSKEVRDAA 106 (141)
T ss_dssp EEEEEEEEEEGGGHHHHHHHHHHHHHHHHHTTCSEEEEEEEEECCCCSSCCHHHHTTCCTTEEEEEEEEEESCHHHHHHH
T ss_pred eEEEEEEECcHHHHHHHHHHHHHHHHHHHHhCCeeeeeeecccCCCCcccCHHHHhcCCCCCEEEEEEEEcCCHHHHHHH
Confidence 44444445566778999998887777767665 8888887764 221 234 444579999999999
Q ss_pred HHHhccCCChhhh
Q psy7458 102 RESAWRSPGWDEC 114 (139)
Q Consensus 102 r~~~~~~~~w~~~ 114 (139)
+++.++||.++..
T Consensus 107 ~~kvm~DPRm~~~ 119 (141)
T 2okq_A 107 NQKMMSDPRMKEF 119 (141)
T ss_dssp HHHHHTCHHHHHT
T ss_pred HHHhhcCcccccc
Confidence 9999999998774
No 37
>1x8d_A Hypothetical protein YIIL; mutarotase, L-rhamnose, biosynthetic protein; HET: RNS; 1.80A {Escherichia coli} SCOP: d.58.4.21
Probab=81.87 E-value=5 Score=25.89 Aligned_cols=68 Identities=7% Similarity=0.079 Sum_probs=45.1
Q ss_pred EEEecCCCHHHHHHHHHH----HhHhhhhcC-ceeEEEEeeeCCcceEEEEEEcCCHHHHHHHHHHhccCC---Chhhhh
Q psy7458 44 SYSLKPGTMIEWGNNWAR----AITHRRNND-EAFAGFFSQVGRLYNVHHFWCYKDLASRKETRESAWRSP---GWDECV 115 (139)
Q Consensus 44 tY~lkpg~~~~~~~~~~~----~l~~~~~~~-~lvG~w~te~G~~n~v~~lw~y~~~~~r~~~r~~~~~~~---~w~~~~ 115 (139)
+-.|+||+.++|.+.-.+ .+..-+..| +--..|. .|+.|.++.+..++| +..++++.++| +|.++.
T Consensus 7 ~~~L~p~~~~eY~~~H~~vWPEv~~~L~~aGi~~ysIfl--~~~~~~LF~~~E~~d----~~~~~~~a~~p~~q~W~~~M 80 (104)
T 1x8d_A 7 VMQVNPDAHEEYQRRHNPIWPELEAVLKSHGAHNYAIYL--DKARNLLFAMVEIES----EERWNAVASTDVCQRWWKYM 80 (104)
T ss_dssp EEECCTTCHHHHHHTTTTCCHHHHHHHHHTTEEEEEEEE--ETTTTEEEEEEEESC----HHHHHHGGGSHHHHHHHHHH
T ss_pred EEEcChhHHHHHHHHHHhcCHHHHHHHHHcCCeEEEEEE--ECCCCeEEEEEEEcC----HHhHHhccCChHHHHHHHHH
Confidence 346799999999886544 233222333 5555553 466678999999998 24456777887 587766
Q ss_pred hc
Q psy7458 116 AY 117 (139)
Q Consensus 116 ~~ 117 (139)
..
T Consensus 81 ~~ 82 (104)
T 1x8d_A 81 TD 82 (104)
T ss_dssp TT
T ss_pred HH
Confidence 43
No 38
>2pgc_A Uncharacterized protein; metagenomics target, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 2.53A {Uncultured marine organism} SCOP: d.58.4.23
Probab=73.28 E-value=22 Score=25.19 Aligned_cols=80 Identities=10% Similarity=-0.002 Sum_probs=55.7
Q ss_pred CceEEEEEEEecCCCHHHHHHHHHHHhHhhhhcC-ceeEEEEeeeCC-cceEEEEEEcCCHHHHHHHHHHhccCCChhhh
Q psy7458 37 PNIYEVRSYSLKPGTMIEWGNNWARAITHRRNND-EAFAGFFSQVGR-LYNVHHFWCYKDLASRKETRESAWRSPGWDEC 114 (139)
Q Consensus 37 ~~iyElRtY~lkpg~~~~~~~~~~~~l~~~~~~~-~lvG~w~te~G~-~n~v~~lw~y~~~~~r~~~r~~~~~~~~w~~~ 114 (139)
++..-|..=+-.--.-.++++.+.+..+.++..| ..+-+-....|. ......=..|+|+++-++..+++.+++++.+.
T Consensus 113 PKYlvLTRA~~~~~~~a~~l~~~nkta~~FkdnGA~TlR~G~~lTGSn~G~ylLGVtYPsM~aIE~tYDalaAs~~f~~L 192 (207)
T 2pgc_A 113 PKYIVLTRAEAAMSDKDKFLNCINDTASCFKDNGALTLRFGNLLTGSNVGNYLLGVGYPSMEAIEKTYDELLAHSSYKEL 192 (207)
T ss_dssp CSEEEEEEEECCGGGHHHHHHHHHHTHHHHHHTTCCEEEEEEBCSBTTTTCEEEEEEESCHHHHHHHHHHHHTCHHHHHH
T ss_pred CceEEEEecccccCChHHHHHHHhhhhhhhhcCchhheecccccccCcccceeeecCCCCHHHHHHHHHHHhcChHHHHH
Confidence 4443343333333334588998888777766655 444444555664 56777778999999999999999999999996
Q ss_pred hh
Q psy7458 115 VA 116 (139)
Q Consensus 115 ~~ 116 (139)
..
T Consensus 193 m~ 194 (207)
T 2pgc_A 193 MT 194 (207)
T ss_dssp TT
T ss_pred Hh
Confidence 53
No 39
>3hhl_A RPA0582; alpha-beta-barrel, structural genomics, PSI-2, protein struc initiative, reductive methylation; HET: MLY MLZ PGE 2PE PE8 1PE PG4; 2.65A {Rhodopseudomonas palustris} PDB: 3hhl_B* 3hhl_C* 3dca_A
Probab=69.11 E-value=24 Score=23.90 Aligned_cols=45 Identities=18% Similarity=0.157 Sum_probs=31.8
Q ss_pred hcCceeEEE---EeeeCCc---ceEEEEEEcCCHHHHHHHHHHhccCCChhhhhh
Q psy7458 68 NNDEAFAGF---FSQVGRL---YNVHHFWCYKDLASRKETRESAWRSPGWDECVA 116 (139)
Q Consensus 68 ~~~~lvG~w---~te~G~~---n~v~~lw~y~~~~~r~~~r~~~~~~~~w~~~~~ 116 (139)
..|+++... .+..|+. -..+.|.+|+|+++-.+- ++||++++...
T Consensus 65 ~GG~~l~rG~~~~~lEG~~~e~~~~~viieFPS~~aa~a~----y~SpeYq~a~~ 115 (143)
T 3hhl_A 65 LGGXVVWQGQFELMLIGPQDEHWDHVFIAEYPSVAAFVEM----IRDPVYREAVK 115 (143)
T ss_dssp TTCEEEEEEEEEEEEESCTTCCCSEEEEEEESCHHHHHHH----HHCHHHHHHHH
T ss_pred cCCEEEeecCCceeEECCCCCCCCeEEEEECCCHHHHHHH----HcCHHHHHHHH
Confidence 345766332 3356764 378899999999887665 69999998653
No 40
>3hf5_A 4-methylmuconolactone methylisomerase; ferredoxin, ferredoxin-like fold, beta-barrel, biodegradation, ortho- cleavage; HET: 3ML; 1.40A {Pseudomonas reinekei} SCOP: d.58.4.19 PDB: 3hds_A* 3hfk_A* 2ifx_A*
Probab=66.85 E-value=23 Score=23.01 Aligned_cols=88 Identities=7% Similarity=-0.028 Sum_probs=50.9
Q ss_pred CceEEEEEEEecCCC-HHHHHHHHHHHhHhhhhcCceeEEEEeee-----C---------CcceEEEEEEcCCHHHHHHH
Q psy7458 37 PNIYEVRSYSLKPGT-MIEWGNNWARAITHRRNNDEAFAGFFSQV-----G---------RLYNVHHFWCYKDLASRKET 101 (139)
Q Consensus 37 ~~iyElRtY~lkpg~-~~~~~~~~~~~l~~~~~~~~lvG~w~te~-----G---------~~n~v~~lw~y~~~~~r~~~ 101 (139)
+||--+-.+.=+||- .++|.+.|..+.+.-...-.+.|+-.+.+ | +-+-++.|| |+|.++..+.
T Consensus 9 rMiKli~ll~Rk~gmS~EeF~~~w~~Hapla~~lpGl~~Y~q~~v~~~~~~~~~~~~~~~~~DgiaElw-F~d~ea~~aa 87 (116)
T 3hf5_A 9 RMIRILYLLVKPESMSHEQFRKECVVHFQMSAGMPGLHKYEVRLVAGNPTDTHVPYLDVGRIDAIGECW-FASEEQYQVY 87 (116)
T ss_dssp TSEEEEEEEECCTTSCHHHHHHHHHHHHHHTTTCTTCSEEEEEEEEECCCCCSSCBCCCCCCCEEEEEE-ESSHHHHHHH
T ss_pred ceEEEEEEEecCCCcCHHHHHHHHHHHHHHHHhCcCCccEEEEEEecCCCCCCCCcCCCCCcCEEEEEE-ECCHHHHHHH
Confidence 345444445555664 77999999843343322234445433321 1 234567766 8888887666
Q ss_pred HHHhccCCChhhhhhcccccceeeeeee
Q psy7458 102 RESAWRSPGWDECVAYTVPLIREMQSRI 129 (139)
Q Consensus 102 r~~~~~~~~w~~~~~~~~~~i~~~~s~l 129 (139)
.++|+|++........+..+..-+
T Consensus 88 ----~~sp~~~a~~~d~~~F~~~i~~~~ 111 (116)
T 3hf5_A 88 ----MESDIRKAWFEHGKYFIGQLKPFV 111 (116)
T ss_dssp ----HHCHHHHHHHHHHHHHCSEEEEEE
T ss_pred ----hCCHHHHHHHhhHHHhhhhhhheE
Confidence 588999887655555555554443
No 41
>2qlw_A RHAU; mutarotase, isomerase; HET: MSE; 1.60A {Rhizobium leguminosarum BV} PDB: 2qlx_A*
Probab=58.92 E-value=10 Score=26.06 Aligned_cols=67 Identities=13% Similarity=0.204 Sum_probs=44.8
Q ss_pred EEEecCCCHHHHHHHHHHH----hHh-hhhcCceeEEEEeeeCCcceEEEEEEcCCHHHHHHHHHHhccCC---Chhhhh
Q psy7458 44 SYSLKPGTMIEWGNNWARA----ITH-RRNNDEAFAGFFSQVGRLYNVHHFWCYKDLASRKETRESAWRSP---GWDECV 115 (139)
Q Consensus 44 tY~lkpg~~~~~~~~~~~~----l~~-~~~~~~lvG~w~te~G~~n~v~~lw~y~~~~~r~~~r~~~~~~~---~w~~~~ 115 (139)
+-.|+||+.++|.+.-.+. +.. +..+..--..|..+-| |.++.+..++| ++..+++.++| +|.++.
T Consensus 47 ~m~Lkp~~~eEYk~~Ha~VWPEv~~~Lk~aGI~nYSIfl~~~~--~~LF~~~E~~d----da~~a~ma~~pv~qrWwa~M 120 (144)
T 2qlw_A 47 KMQLNPGMEAEYRKRHDEIWPELVDLLHQSGASDYSIHLDRET--NTLFGVLTRPK----DHTMASLPDHPVMKKWWAHM 120 (144)
T ss_dssp EEEBCTTCHHHHHHHHHTCCHHHHHHHHHHTCEEEEEEEETTT--TEEEEEEEEET----TCCGGGGGGCHHHHHHHHHH
T ss_pred EEEcCchHHHHHHHHHHhCCHHHHHHHHHcCCeEEEEEEECCC--CeEEEEEEEcC----HHHHHhccCChHHHHHHHHH
Confidence 4467999999999876553 222 2233466666655433 69999999987 25566677777 577765
Q ss_pred h
Q psy7458 116 A 116 (139)
Q Consensus 116 ~ 116 (139)
.
T Consensus 121 ~ 121 (144)
T 2qlw_A 121 A 121 (144)
T ss_dssp G
T ss_pred H
Confidence 4
No 42
>3lo3_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.38A {Colwellia psychrerythraea} SCOP: d.58.4.0
Probab=56.89 E-value=32 Score=21.29 Aligned_cols=61 Identities=8% Similarity=0.127 Sum_probs=38.3
Q ss_pred CCCHHHHHHHHHHHhHhhhhcCceeEEEEe--eeCC-cceEEEEEEcCCHHHHHHHHHHhccCCChhhhh
Q psy7458 49 PGTMIEWGNNWARAITHRRNNDEAFAGFFS--QVGR-LYNVHHFWCYKDLASRKETRESAWRSPGWDECV 115 (139)
Q Consensus 49 pg~~~~~~~~~~~~l~~~~~~~~lvG~w~t--e~G~-~n~v~~lw~y~~~~~r~~~r~~~~~~~~w~~~~ 115 (139)
|....+|.+.....+. +..|+++..... ..|+ ....+.|.+|+|+++-.+- +++|+.++..
T Consensus 16 ~e~y~~Y~~~~~~~l~--~~GG~~l~rg~~~~lEG~~~~~~~viieFps~~aa~a~----y~SpeYq~a~ 79 (94)
T 3lo3_A 16 AEKLQQYGARVASTLA--KYSGEVLVKGSVEQLHGKFEHKAQVILEFPSREDAYNW----YHSEEYQALI 79 (94)
T ss_dssp HHHHHHHHHHHHHHHH--TTTCEEEEEEECEEEESCCCCSEEEEEEESSHHHHHHH----HHSHHHHTTH
T ss_pred HHHHHHHHHHHHHHHH--HcCCEEEEEcccccccCCCCCCeEEEEECCCHHHHHHH----HCCHHHHHHH
Confidence 3344444444333332 234566633322 4576 5688999999999887665 6899998865
No 43
>4ae5_A Signal transduction protein trap; signaling protein, phosphorylation, RNAIII, quorum SENS biofilm, toxin production; 1.85A {Staphylococcus aureus}
Probab=35.66 E-value=1.1e+02 Score=21.17 Aligned_cols=63 Identities=8% Similarity=-0.020 Sum_probs=41.8
Q ss_pred CceEEEEEEEecCCCHHHHHHHHHHHhHhhhhcCceeEEE--EeeeCCcceEEEEEEcCCHHHHHHH
Q psy7458 37 PNIYEVRSYSLKPGTMIEWGNNWARAITHRRNNDEAFAGF--FSQVGRLYNVHHFWCYKDLASRKET 101 (139)
Q Consensus 37 ~~iyElRtY~lkpg~~~~~~~~~~~~l~~~~~~~~lvG~w--~te~G~~n~v~~lw~y~~~~~r~~~ 101 (139)
.+++-+-...+++|..++|.+.|.+....-...-..+++- ....| ++++.+-.++|.++-++=
T Consensus 65 ~gfiv~N~~~V~~g~~~~fE~rf~~r~~~l~~~pGF~~f~LLr~~~~--~~y~v~T~Wes~e~Fe~W 129 (167)
T 4ae5_A 65 HHFYCAIFIPSTEDHAYQLEKKLISVDDNFRNFGGFKSYRLLRPAKG--TTYKIYFGFADRHAYEDF 129 (167)
T ss_dssp TSEEEEEEECCCTTTHHHHHHHHHTSCGGGGGSTTEEEEEEEEESSS--SCEEEEEEESSHHHHHHH
T ss_pred CcEEEEEEEEcCCChHHHHHHHHHhhhccccCCCCcEEEEEeecCCC--CcEEEEEEECCHHHHHHH
Confidence 5788899999999999999999976322111222334332 23333 577777888887776654
No 44
>2qyc_A Ferredoxin-like protein; stress responsive A/B barrel domain, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 1.90A {Bordetella bronchiseptica RB50}
Probab=29.23 E-value=1e+02 Score=18.88 Aligned_cols=86 Identities=15% Similarity=0.138 Sum_probs=51.8
Q ss_pred CceEEEEEEEecCCCHHHHHHHHHHHhHhhhh-cCceeEEEEe-ee-CC--cceEEEEEEcCCHHHHHHHHHHhccCCCh
Q psy7458 37 PNIYEVRSYSLKPGTMIEWGNNWARAITHRRN-NDEAFAGFFS-QV-GR--LYNVHHFWCYKDLASRKETRESAWRSPGW 111 (139)
Q Consensus 37 ~~iyElRtY~lkpg~~~~~~~~~~~~l~~~~~-~~~lvG~w~t-e~-G~--~n~v~~lw~y~~~~~r~~~r~~~~~~~~w 111 (139)
+||.=+-...+|++.-++=.+.+.+.+...+. .-.+..+-.. .. +. .-+++.+-.|+|.++++.- ..+|+.
T Consensus 3 ~Mi~HiVlfk~k~~~~~~~~~~~~~~l~~L~~~ip~i~~~~~G~~~~~~~~~~~~~~~~~F~s~e~l~~Y----~~hP~H 78 (103)
T 2qyc_A 3 TMFLHVVMMEFDDGIDAGFFRTVDEYVARMKRECDGLLLYHFGENVAARSQGYTHATSSAFVDAAAHDAY----QVCPAH 78 (103)
T ss_dssp EEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHSTTEEEEEEEECCCTTCTTCCEEEEEEESSHHHHHHH----TTCHHH
T ss_pred ceEEEEEEEEECCCCCHHHHHHHHHHHHHhhhcCCCeEEEEECCCCCCCCCCccEEEEEEECCHHHHHHH----hCCHHH
Confidence 47888889999999644334444443322221 1122222111 11 21 2478889999999998764 579999
Q ss_pred hhhhhcccccceeee
Q psy7458 112 DECVAYTVPLIREMQ 126 (139)
Q Consensus 112 ~~~~~~~~~~i~~~~ 126 (139)
+++.+...+++...-
T Consensus 79 ~~~~~~~~~~~~~~~ 93 (103)
T 2qyc_A 79 VAMKAFMGPRIKRVV 93 (103)
T ss_dssp HHHHHHHGGGEEEEE
T ss_pred HHHHHHHHHHhcCcE
Confidence 988665667665443
No 45
>1tr0_A Stable protein 1; plant protein; 1.80A {Populus tremula} SCOP: d.58.4.4 PDB: 1si9_A
Probab=26.88 E-value=1.2e+02 Score=18.78 Aligned_cols=84 Identities=11% Similarity=0.011 Sum_probs=50.8
Q ss_pred CceEEEEEEEecCCCHHHHHHHHHHHhHhhhh-cCceeEEEE-eee-----C--CcceEEEEEEcCCHHHHHHHHHHhcc
Q psy7458 37 PNIYEVRSYSLKPGTMIEWGNNWARAITHRRN-NDEAFAGFF-SQV-----G--RLYNVHHFWCYKDLASRKETRESAWR 107 (139)
Q Consensus 37 ~~iyElRtY~lkpg~~~~~~~~~~~~l~~~~~-~~~lvG~w~-te~-----G--~~n~v~~lw~y~~~~~r~~~r~~~~~ 107 (139)
.||.=+-...+|++.-++=++.+.+.+...+. .-.+..+=. ... | ..-+++.+-.|+|.++++.- ..
T Consensus 7 ~mi~HiVlfklk~~~~~~~~~~~~~~l~~L~~~ip~i~~~~~G~~~~~~~~~~~~~~d~~l~~~F~s~e~l~~Y----~~ 82 (108)
T 1tr0_A 7 KLVKHTLLTRFKDEITREQIDNYINDYTNLLDLIPSMKSFNWGTDLGMESAELNRGYTHAFESTFESKSGLQEY----LD 82 (108)
T ss_dssp CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCTTCCEEEEEECCSCSCTTTTTTCCEEEEEEESSHHHHHHH----HT
T ss_pred CcEEEEEEEEECCCCCHHHHHHHHHHHHHHhhcCCceEEEEEccCCCccccccCCCccEEEEEEECCHHHHHHH----hC
Confidence 38999999999999644334444443322221 112221111 111 1 12368899999999999755 46
Q ss_pred CCChhhhhhccccccee
Q psy7458 108 SPGWDECVAYTVPLIRE 124 (139)
Q Consensus 108 ~~~w~~~~~~~~~~i~~ 124 (139)
+|+.+++.....+++..
T Consensus 83 hP~H~~~~~~~~~~~~~ 99 (108)
T 1tr0_A 83 SAALAAFAEGFLPTLSQ 99 (108)
T ss_dssp CHHHHHHHHHHGGGEEE
T ss_pred CHHHHHHHHHHHHHhCC
Confidence 99999887656666543
No 46
>3bgu_A Ferredoxin-like protein of unknown function; ferredoxin-like fold, stress responsive A/B barrel domain, S genomics; 1.50A {Thermobifida fusca}
Probab=25.28 E-value=1.3e+02 Score=19.00 Aligned_cols=87 Identities=10% Similarity=0.076 Sum_probs=52.7
Q ss_pred CCCCceEEEEEEEecCCCHHHHHHHHHHHhHhhhh-cCceeEEEEe-eeCC---cceEEEEEEcCCHHHHHHHHHHhccC
Q psy7458 34 SGAPNIYEVRSYSLKPGTMIEWGNNWARAITHRRN-NDEAFAGFFS-QVGR---LYNVHHFWCYKDLASRKETRESAWRS 108 (139)
Q Consensus 34 ~~~~~iyElRtY~lkpg~~~~~~~~~~~~l~~~~~-~~~lvG~w~t-e~G~---~n~v~~lw~y~~~~~r~~~r~~~~~~ 108 (139)
...+||.=+-...+|++.-++=.+.+.+.+...+. .-.+..+=.. ...+ .-+++.+-.|+|.++++.-. .+
T Consensus 17 ~~~~mI~HIVlfklK~~~s~e~~~~~~~~l~~L~~~ip~i~~~~~G~~~s~~~~g~d~~l~~~F~s~edl~~Y~----~h 92 (116)
T 3bgu_A 17 FQGMGIRHIALFRWNDTVTPDQVEQVITALSKLPAAIPELKNYAFGADLGLAAGNYDFAVVADLDGEDGFRAYQ----DH 92 (116)
T ss_dssp CSSCEEEEEEEEEECTTCCHHHHHHHHHHHHHCCCCCTTEEEEEEEECCSCSTTCCSEEEEEEEEHHHHHHHHH----HS
T ss_pred cCCCcEEEEEEEEECCCCCHHHHHHHHHHHHHHhhcCCceEEEEEccCCCCCCCCeeEEEEEEECCHHHHHHHh----cC
Confidence 33478999999999999644434444444332222 1122221111 1111 24788899999999998654 59
Q ss_pred CChhhhhhccccccee
Q psy7458 109 PGWDECVAYTVPLIRE 124 (139)
Q Consensus 109 ~~w~~~~~~~~~~i~~ 124 (139)
|+.+++.+...+++..
T Consensus 93 P~H~~~~~~~~p~~~~ 108 (116)
T 3bgu_A 93 PDHRAALAIIAPMLAD 108 (116)
T ss_dssp HHHHHHHHHHGGGEEE
T ss_pred HHHHHHHHHHHHHhCc
Confidence 9988876556666543
No 47
>1q4r_A Protein AT3G17210; center for eukaryotic structural genom structural genomics, protein structure initiative, CESG, UN function; 1.90A {Arabidopsis thaliana} SCOP: d.58.4.4 PDB: 1q53_A 2q3p_A
Probab=23.29 E-value=1.4e+02 Score=18.56 Aligned_cols=84 Identities=14% Similarity=0.036 Sum_probs=50.3
Q ss_pred CceEEEEEEEecCCCHHHHHHHHHHHhHhhhh-cCceeEEEE-eee---C--CcceEEEEEEcCCHHHHHHHHHHhccCC
Q psy7458 37 PNIYEVRSYSLKPGTMIEWGNNWARAITHRRN-NDEAFAGFF-SQV---G--RLYNVHHFWCYKDLASRKETRESAWRSP 109 (139)
Q Consensus 37 ~~iyElRtY~lkpg~~~~~~~~~~~~l~~~~~-~~~lvG~w~-te~---G--~~n~v~~lw~y~~~~~r~~~r~~~~~~~ 109 (139)
+||.=+-...+|++.-++=++.+.+.+...+. .-.+..+=. ... | ..-+++.+-.|+|.++++.- ..+|
T Consensus 9 ~mi~HiVlfklk~~~~~~~~~~~~~~l~~L~~~ip~i~~~~~G~~~~~~~~~~~~d~~l~~~F~s~e~l~~Y----~~hP 84 (112)
T 1q4r_A 9 GPVKHVLLASFKDGVSPEKIEELIKGYANLVNLIEPMKAFHWGKDVSIENLHQGYTHIFESTFESKEAVAEY----IAHP 84 (112)
T ss_dssp -CEEEEEEEEECTTCCHHHHHHHHHHHHTHHHHCTTCCEEEEEECCCSSSCSTTCCEEEEEEESCHHHHHHH----HHSH
T ss_pred CCEEEEEEEEECCCCCHHHHHHHHHHHHHHhhhCCceEEEEEccCCCccccCCCccEEEEEEECCHHHHHHH----hCCH
Confidence 78999999999999644334444444332221 112221111 111 1 12478889999999999775 4699
Q ss_pred Chhhhhhccccccee
Q psy7458 110 GWDECVAYTVPLIRE 124 (139)
Q Consensus 110 ~w~~~~~~~~~~i~~ 124 (139)
+.+++.....+++..
T Consensus 85 ~H~~~~~~~~~~~~~ 99 (112)
T 1q4r_A 85 AHVEFATIFLGSLDK 99 (112)
T ss_dssp HHHHHHHHHHHTEEE
T ss_pred HHHHHHHHHHHHhcC
Confidence 998877655555543
No 48
>2cb2_A Sulfur oxygenase reductase; oxidoreductase, mononuclear non-heme iron, biogeochemical sulfur cycle, extremophIle, thermophilic, acidophilic; 1.7A {Acidianus ambivalens} SCOP: d.58.4.17 PDB: 2yav_A 2yaw_A 2yax_A* 2yax_B* 3bxv_A
Probab=21.43 E-value=2.8e+02 Score=21.20 Aligned_cols=79 Identities=8% Similarity=0.082 Sum_probs=60.7
Q ss_pred CceEEEEEEEecCCCHHHHHHHHHHHhHhhhhcCceeEEE-EeeeC----------------------------------
Q psy7458 37 PNIYEVRSYSLKPGTMIEWGNNWARAITHRRNNDEAFAGF-FSQVG---------------------------------- 81 (139)
Q Consensus 37 ~~iyElRtY~lkpg~~~~~~~~~~~~l~~~~~~~~lvG~w-~te~G---------------------------------- 81 (139)
.++.-+-.+++++|.-++|.+.+.+.+...+..-..+|+. .-++|
T Consensus 158 qR~va~geH~Vk~G~EKeFEe~~~~tLe~lk~apGflG~MIlKeIGvs~iGSfql~~~g~~~~l~t~g~~pP~~~~~~~~ 237 (318)
T 2cb2_A 158 KRVVAFAEHSVIPGKEKQFEDAIVRTLEMLKKAPGFLGAMVLKEIGVSGIGSMQFGAKGFHQVLENPGSLEPDPNNVMYS 237 (318)
T ss_dssp SSEEEEEEEEECTTCHHHHHHHHHHHHHHHTTSTTEEEEEEEEEEEECTTTTTCCCHHHHHHHHTCCSSSCCCGGGCCSC
T ss_pred ceEEEeeeeeeccchHHHHHHHHHHHHHHHhcCCCcchhHHHHHhccccccccccCchHHHHHhhhccCCCCCccccccc
Confidence 5799999999999999999999999887765434666665 33664
Q ss_pred -----C-cceEEEEEEcCCHHHHHHHHHHhccCCChhhhh
Q psy7458 82 -----R-LYNVHHFWCYKDLASRKETRESAWRSPGWDECV 115 (139)
Q Consensus 82 -----~-~n~v~~lw~y~~~~~r~~~r~~~~~~~~w~~~~ 115 (139)
+ ..++..--.++|.++..---.++.-+++.++..
T Consensus 238 ~~e~~~~P~eYlVH~EW~d~esa~fGf~rv~vs~e~R~iH 277 (318)
T 2cb2_A 238 VPEAKNTPQQYIVHVEWANTDALMFGMGRVLLYPELRQVH 277 (318)
T ss_dssp TGGGCCBSEEEEEEEEESSHHHHHHHHHHHHHSHHHHHHH
T ss_pred ccccCCCCcceEEEEEecCchhhhhhHHHhhcCHHHHHHH
Confidence 2 345666668889998777777888888888855
No 49
>2jdj_A HAPK, REDY-like protein; prodigiosin, biosynthesis, biosynthetic protein; 2.00A {Hahella chejuensis}
Probab=20.32 E-value=1.8e+02 Score=18.64 Aligned_cols=85 Identities=7% Similarity=-0.041 Sum_probs=54.1
Q ss_pred EEEEEEecCCC-HHHHHHHHHH-HhHhhhhcCceeE--EEEee-eCC-cceEEEEEEcCCHHHHHHHHHHhccCCChhhh
Q psy7458 41 EVRSYSLKPGT-MIEWGNNWAR-AITHRRNNDEAFA--GFFSQ-VGR-LYNVHHFWCYKDLASRKETRESAWRSPGWDEC 114 (139)
Q Consensus 41 ElRtY~lkpg~-~~~~~~~~~~-~l~~~~~~~~lvG--~w~te-~G~-~n~v~~lw~y~~~~~r~~~r~~~~~~~~w~~~ 114 (139)
=+.-++||||. .++|.+-+++ ..|...+...+.. +...+ .|+ .-+++.+..++|+++-.+. +++|..++.
T Consensus 4 iv~~i~L~~g~d~~aFe~w~~evD~P~~~~LpsVrsF~V~R~~~~g~~py~yiEvi~v~s~eaf~~~----m~S~~~~~~ 79 (105)
T 2jdj_A 4 IIHKIRLFDVAQADAFEFWVQNVDYATCPDLPSVVRFDVHRASLQANAPYHYVEVIKITDRAAFDAD----METSTFAGL 79 (105)
T ss_dssp EEEEEEESCGGGHHHHHHHHHHTHHHHGGGCTTEEEEEEEECCCCTTCSCSEEEEEEESCHHHHHHH----HTSHHHHHH
T ss_pred EEEEEecCCCCCHHHHHHHHHhchhhhccCCCcceeEEEEecccCCCCCeeEEEEEecCCHHHHHHH----hcCHHHHHH
Confidence 35678999998 5678887777 5666554433322 22112 254 5689999999999988655 488888886
Q ss_pred hhc---ccccceeeeeee
Q psy7458 115 VAY---TVPLIREMQSRI 129 (139)
Q Consensus 115 ~~~---~~~~i~~~~s~l 129 (139)
... -...++.+..+.
T Consensus 80 ~~dF~~fAdv~~~~~~~~ 97 (105)
T 2jdj_A 80 VQAFSRMAEVVEELAGEQ 97 (105)
T ss_dssp HHHHHHHEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHhccc
Confidence 543 333454444443
Done!