RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy746
         (178 letters)



>d1cvua1 a.93.1.2 (A:74-583) Prostaglandin H2 synthase {Mouse (Mus
           musculus) [TaxId: 10090]}
          Length = 511

 Score =  132 bits (334), Expect = 2e-37
 Identities = 37/168 (22%), Positives = 59/168 (35%), Gaps = 19/168 (11%)

Query: 11  IDMVTWMHRPSIV-QGYLDHLLEGQQTQFIQPFEDWWEDFNINNKLKTNHPPFQYDPHGD 69
                +++  SI+ +  L   +E    Q               N                
Sbjct: 330 YSFKQFLYNNSILLEHGLTQFVESFTRQIAGRV------AGGRN----------VPIAVQ 373

Query: 70  DLTAIGIQRQRDYGMPGYNEFRKYAGLKPVKSFEELSDVIGPENIHLLKLGYKHVDDIDL 129
            +    I + R+      NE+RK   LKP  SFEEL+     E    LK  Y  +D ++L
Sbjct: 374 AVAKASIDQSREMKYQSLNEYRKRFSLKPYTSFEELTG--EKEMAAELKALYSDIDVMEL 431

Query: 130 FVGGYLENPLHDSLFGPTFTYVIADQFYRWKFGDRFWFSVLGKPWSFT 177
           +    +E P  D++FG T   + A    +   G+        KP +F 
Sbjct: 432 YPALLVEKPRPDAIFGETMVELGAPFSLKGLMGNPICSPQYWKPSTFG 479


>g1cxp.1 a.93.1.2 (A:,C:) Myeloperoxidase {Human (Homo sapiens)
           [TaxId: 9606]}
          Length = 570

 Score =  132 bits (333), Expect = 4e-37
 Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 5/165 (3%)

Query: 4   KSGKAAQIDMVTWMHRPSIVQGYLDHLLEGQQTQFIQPFEDWWEDFNINNKLKTNHPPFQ 63
           +      +  V +     +++G +D +L         P +   ++    +++       Q
Sbjct: 346 EPNPRVPLSRVFFASWRVVLEGGIDPILR---GLMATPAKLNRQNQIAVDEI-RERLFEQ 401

Query: 64  YDPHGDDLTAIGIQRQRDYGMPGYNEFRKYAGLKPVKSFEELSDVIG-PENIHLLKLGYK 122
               G DL A+ +QR RD+G+PGYN +R++ GL   ++  +L  V+   +    L   Y 
Sbjct: 402 VMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYG 461

Query: 123 HVDDIDLFVGGYLENPLHDSLFGPTFTYVIADQFYRWKFGDRFWF 167
             ++ID+++GG  E        GP    +I  QF + + GDRFW+
Sbjct: 462 TPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWW 506


>d1q4ga1 a.93.1.2 (A:74-584) Prostaglandin H2 synthase {Sheep (Ovis
           aries) [TaxId: 9940]}
          Length = 511

 Score =  130 bits (328), Expect = 1e-36
 Identities = 30/140 (21%), Positives = 52/140 (37%), Gaps = 2/140 (1%)

Query: 38  FIQPFEDWWEDFNINNKLKTNHPPFQYDPHGDDLTAIGIQRQRDYGMPGYNEFRKYAGLK 97
            +    +   D                D H   +    I+  R   +  +NE+RK  G+K
Sbjct: 341 LVDYGVEALVDAFSRQPAGRIGGGRNIDHHILHVAVDVIKESRVLRLQPFNEYRKRFGMK 400

Query: 98  PVKSFEELSDVIGPENIHLLKLGYKHVDDIDLFVGGYLENPLHDSLFGPTFTYVIADQFY 157
           P  SF+EL+     E    L+  Y  +D ++ + G  LE    +S+FG +   + A    
Sbjct: 401 PYTSFQELTG--EKEMAAELEELYGDIDALEFYPGLLLEKCHPNSIFGESMIEMGAPFSL 458

Query: 158 RWKFGDRFWFSVLGKPWSFT 177
           +   G+        K  +F 
Sbjct: 459 KGLLGNPICSPEYWKASTFG 478


>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human
           (Homo sapiens) [TaxId: 9606]}
          Length = 299

 Score = 27.1 bits (59), Expect = 1.2
 Identities = 16/79 (20%), Positives = 24/79 (30%), Gaps = 4/79 (5%)

Query: 44  DWWEDFNINNKLKTNHPPFQYDPHGDDLTAI--GIQRQRDYGMPGYNEFRKYAGLK--PV 99
           D W    I  +L    P    D   D LT I   +    +   P       Y   K  P 
Sbjct: 183 DMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPG 242

Query: 100 KSFEELSDVIGPENIHLLK 118
                +    G + + L++
Sbjct: 243 IPLHHIFSAAGDDLLDLIQ 261


>d3efza1 a.118.7.1 (A:46-268) 14-3-3 protein cgd1_2980
           {Cryptosporidium parvum [TaxId: 5807]}
          Length = 223

 Score = 25.2 bits (55), Expect = 4.0
 Identities = 7/26 (26%), Positives = 10/26 (38%)

Query: 99  VKSFEELSDVIGPENIHLLKLGYKHV 124
           +K   E SD      I LL    ++ 
Sbjct: 4   IKVLTESSDFRDNSLILLLAGSLRNR 29


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.322    0.143    0.470 

Gapped
Lambda     K      H
   0.267   0.0517    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 784,083
Number of extensions: 37999
Number of successful extensions: 109
Number of sequences better than 10.0: 1
Number of HSP's gapped: 106
Number of HSP's successfully gapped: 12
Length of query: 178
Length of database: 2,407,596
Length adjustment: 80
Effective length of query: 98
Effective length of database: 1,309,196
Effective search space: 128301208
Effective search space used: 128301208
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 50 (23.5 bits)